Citrus Sinensis ID: 030486

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
MKMAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKAKNEQPA
ccEEEcccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEcccHHHHccccccccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEccccccccccHHHHHHHHHHHHcccccc
ccEEEEccccccccccccccccEEEEEccHHHHcHHHHHHHHHHHHHHcccEEEEEccHHHHHcccHHHHHccHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccEEEEcHcccHHHHHHHHHHHHccccccEEEEEEEEcccccccccccHHHHHHHHccccccccc
MKMAILDESvvnsnispdnsygaVVLGgtfdrlhdghRLFLKASAELARDRIVvgvcdgpmltnKQFAELIQPVDERMRNVEAYIKSIkpelvvqtepitdpygpsivdeNLEAIVVSketlpgglsvnkkradrglsQLKIEVVDLVsegssgdklssSTLRKLEAEKAKNEQPA
MKMAILDESVvnsnispdnSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIksikpelvvqtepiTDPYGPSIVDENLEAIVVSKetlpgglsvnkkradrglsqLKIEVvdlvsegssgdklssstlrkleaekakneqpa
MKMAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVsegssgdklsssTLRKLEAEKAKNEQPA
******************NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETL*****************LKIEVV*******************************
**********************AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSST*R*************
MKMAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVS***********TLRKL***********
*KMAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEG***************AE********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKMAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKAKNEQPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query176 2.2.26 [Sep-21-2011]
Q9ZPV8176 Phosphopantetheine adenyl yes no 0.937 0.937 0.837 3e-79
P53332305 Phosphopantetheine adenyl yes no 0.835 0.481 0.393 6e-28
Q9DBL7 563 Bifunctional coenzyme A s yes no 0.880 0.275 0.389 6e-27
Q8MIR4 562 Bifunctional coenzyme A s yes no 0.801 0.250 0.421 7e-26
Q13057 564 Bifunctional coenzyme A s yes no 0.880 0.274 0.383 1e-25
Q8ZY96155 Phosphopantetheine adenyl yes no 0.829 0.941 0.414 6e-22
Q8TGY4157 Phosphopantetheine adenyl yes no 0.829 0.929 0.382 3e-19
Q10350316 Uncharacterized protein C yes no 0.698 0.389 0.349 4e-19
O27918164 Phosphopantetheine adenyl yes no 0.772 0.829 0.366 2e-18
Q5JHE8165 Phosphopantetheine adenyl yes no 0.795 0.848 0.363 2e-16
>sp|Q9ZPV8|COAD_ARATH Phosphopantetheine adenylyltransferase OS=Arabidopsis thaliana GN=COAD PE=1 SV=1 Back     alignment and function desciption
 Score =  294 bits (752), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 139/166 (83%), Positives = 159/166 (95%), Gaps = 1/166 (0%)

Query: 12  NSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELI 71
           +S +SP NS+GAVVLGGTFDRLHDGHR+FLKA+AELARDRIVVGVCDGPMLT KQF+++I
Sbjct: 6   DSKMSPANSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMI 65

Query: 72  QPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKK 131
           QP++ERMRNVE Y+KSIKPELVVQ EPITDPYGPSIVDENLEAIVVSKETLPGGLSVN+K
Sbjct: 66  QPIEERMRNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRK 125

Query: 132 RADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA-KNEQPA 176
           RA+RGLSQLKIEVV++VS+GSSG+K+SSSTLRK+EAEKA K +QPA
Sbjct: 126 RAERGLSQLKIEVVEIVSDGSSGNKISSSTLRKMEAEKASKQKQPA 171
Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Does not accept 4'-phosphopantothenoylcysteine as a substrate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 3
>sp|P53332|COAD_YEAST Phosphopantetheine adenylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAB4 PE=1 SV=1 Back     alignment and function description
>sp|Q9DBL7|COASY_MOUSE Bifunctional coenzyme A synthase OS=Mus musculus GN=Coasy PE=1 SV=2 Back     alignment and function description
>sp|Q8MIR4|COASY_PIG Bifunctional coenzyme A synthase OS=Sus scrofa GN=COASY PE=1 SV=1 Back     alignment and function description
>sp|Q13057|COASY_HUMAN Bifunctional coenzyme A synthase OS=Homo sapiens GN=COASY PE=1 SV=4 Back     alignment and function description
>sp|Q8ZY96|COAD_PYRAE Phosphopantetheine adenylyltransferase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=coaD PE=3 SV=1 Back     alignment and function description
>sp|Q8TGY4|COAD_METKA Phosphopantetheine adenylyltransferase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=coaD PE=3 SV=1 Back     alignment and function description
>sp|Q10350|YDA8_SCHPO Uncharacterized protein C1F12.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.08 PE=4 SV=2 Back     alignment and function description
>sp|O27918|COAD_METTH Phosphopantetheine adenylyltransferase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=coaD PE=3 SV=2 Back     alignment and function description
>sp|Q5JHE8|COAD_PYRKO Phosphopantetheine adenylyltransferase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=coaD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
297832482176 4-phosphopantetheine adenylyltransferase 0.937 0.937 0.855 1e-78
15224138176 phosphopantetheine adenylyltransferase [ 0.937 0.937 0.837 1e-77
255561104 493 syntaxin, putative [Ricinus communis] gi 0.960 0.342 0.834 2e-77
224133810178 predicted protein [Populus trichocarpa] 0.977 0.966 0.815 2e-75
296089428 372 unnamed protein product [Vitis vinifera] 0.943 0.446 0.801 1e-72
225460271174 PREDICTED: phosphopantetheine adenylyltr 0.965 0.977 0.788 2e-72
449529337178 PREDICTED: phosphopantetheine adenylyltr 0.954 0.943 0.786 2e-71
359476888 493 PREDICTED: syntaxin-112 [Vitis vinifera] 0.914 0.326 0.788 4e-71
449432834178 PREDICTED: phosphopantetheine adenylyltr 0.954 0.943 0.781 8e-71
297735135174 unnamed protein product [Vitis vinifera] 0.914 0.925 0.788 4e-70
>gi|297832482|ref|XP_002884123.1| 4-phosphopantetheine adenylyltransferase [Arabidopsis lyrata subsp. lyrata] gi|297329963|gb|EFH60382.1| 4-phosphopantetheine adenylyltransferase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  297 bits (760), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 142/166 (85%), Positives = 160/166 (96%), Gaps = 1/166 (0%)

Query: 12  NSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELI 71
           +S +SP NS+GAVVLGGTFDRLHDGHR+FLKA+AELARDRIVVGVCDGPMLTNKQFAE+I
Sbjct: 6   DSKMSPVNSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTNKQFAEMI 65

Query: 72  QPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKK 131
           QP++ERMRNVE Y+KSIKPELVVQ EPI+DPYGPSIVDENLEAIVVSKETLPGGLSVN+K
Sbjct: 66  QPIEERMRNVEKYVKSIKPELVVQAEPISDPYGPSIVDENLEAIVVSKETLPGGLSVNRK 125

Query: 132 RADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA-KNEQPA 176
           RA+RGLSQLKIEVV++VS+GSSG+K+SSSTLRKLEAEKA K +QPA
Sbjct: 126 RAERGLSQLKIEVVEIVSDGSSGNKISSSTLRKLEAEKADKQKQPA 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15224138|ref|NP_179417.1| phosphopantetheine adenylyltransferase [Arabidopsis thaliana] gi|75267775|sp|Q9ZPV8.1|COAD_ARATH RecName: Full=Phosphopantetheine adenylyltransferase; AltName: Full=Dephospho-CoA pyrophosphorylase; Short=AtCoaD; AltName: Full=Pantetheine-phosphate adenylyltransferase gi|4309741|gb|AAD15511.1| hypothetical protein [Arabidopsis thaliana] gi|34365611|gb|AAQ65117.1| At2g18250 [Arabidopsis thaliana] gi|51971991|dbj|BAD44660.1| hypothetical protein [Arabidopsis thaliana] gi|330251652|gb|AEC06746.1| phosphopantetheine adenylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255561104|ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223539242|gb|EEF40835.1| syntaxin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224133810|ref|XP_002327686.1| predicted protein [Populus trichocarpa] gi|222836771|gb|EEE75164.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296089428|emb|CBI39247.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225460271|ref|XP_002278835.1| PREDICTED: phosphopantetheine adenylyltransferase [Vitis vinifera] Back     alignment and taxonomy information
>gi|449529337|ref|XP_004171656.1| PREDICTED: phosphopantetheine adenylyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359476888|ref|XP_002265408.2| PREDICTED: syntaxin-112 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432834|ref|XP_004134203.1| PREDICTED: phosphopantetheine adenylyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297735135|emb|CBI17497.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
TAIR|locus:2062165176 COAD "4-phosphopantetheine ade 0.937 0.937 0.783 9.4e-66
WB|WBGene00022031 461 Y65B4A.8 [Caenorhabditis elega 0.727 0.277 0.507 9.1e-29
ZFIN|ZDB-GENE-040912-137 554 coasy "Coenzyme A synthase" [D 0.772 0.245 0.411 1.2e-26
SGD|S000003509305 CAB4 "Probable pantetheine-pho 0.732 0.422 0.412 5.9e-25
FB|FBgn0035632 518 Ppat-Dpck "Bifunctional Phosph 0.818 0.277 0.423 3.9e-24
MGI|MGI:1918993 563 Coasy "Coenzyme A synthase" [M 0.789 0.246 0.395 8.6e-24
RGD|1549767 563 Coasy "CoA synthase" [Rattus n 0.789 0.246 0.395 8.6e-24
UNIPROTKB|Q8MIR4 562 COASY "Bifunctional coenzyme A 0.789 0.247 0.395 1.4e-23
UNIPROTKB|Q13057 564 COASY "Bifunctional coenzyme A 0.789 0.246 0.388 1.8e-23
UNIPROTKB|E2RIA4 564 COASY "Uncharacterized protein 0.789 0.246 0.388 3.9e-23
TAIR|locus:2062165 COAD "4-phosphopantetheine adenylyltransferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 130/166 (78%), Positives = 147/166 (88%)

Query:    12 NSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELI 71
             +S +SP NS+GAVVLGGTFDRLHDGHR+FLKA+AELARDRIVVGVCDGPMLT KQF+++I
Sbjct:     6 DSKMSPANSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMI 65

Query:    72 QPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKK 131
             QP++ERMRNVE Y+KSIKPELVVQ EPITDPYGPSIVDENLEAIVVSKETLPGGLSVN+K
Sbjct:    66 QPIEERMRNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRK 125

Query:   132 RADRGLSQLKIEVVDLVXXXXXXXXXXXXTLRKLEAEKA-KNEQPA 176
             RA+RGLSQLKIEVV++V            TLRK+EAEKA K +QPA
Sbjct:   126 RAERGLSQLKIEVVEIVSDGSSGNKISSSTLRKMEAEKASKQKQPA 171
GO:0003824 "catalytic activity" evidence=IEA
GO:0004140 "dephospho-CoA kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA;ISS
GO:0015937 "coenzyme A biosynthetic process" evidence=IEA;IDA
GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS
GO:0004595 "pantetheine-phosphate adenylyltransferase activity" evidence=IDA
GO:0006629 "lipid metabolic process" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009651 "response to salt stress" evidence=IMP
GO:0019915 "lipid storage" evidence=IMP
GO:0040007 "growth" evidence=IMP
GO:0080020 "regulation of coenzyme A biosynthetic process" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
WB|WBGene00022031 Y65B4A.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040912-137 coasy "Coenzyme A synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
SGD|S000003509 CAB4 "Probable pantetheine-phosphate adenylyltransferase (PPAT)" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
FB|FBgn0035632 Ppat-Dpck "Bifunctional Phosphopantetheine adenylyltransferase - Dephospho-CoA kinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1918993 Coasy "Coenzyme A synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1549767 Coasy "CoA synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8MIR4 COASY "Bifunctional coenzyme A synthase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q13057 COASY "Bifunctional coenzyme A synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RIA4 COASY "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q46A30COAD_METBF2, ., 7, ., 7, ., 30.30400.80110.8757yesno
Q8TGY4COAD_METKA2, ., 7, ., 7, ., 30.38250.82950.9299yesno
Q8ZY96COAD_PYRAE2, ., 7, ., 7, ., 30.41440.82950.9419yesno
Q9ZPV8COAD_ARATH2, ., 7, ., 7, ., 30.83730.93750.9375yesno
Q8TK70COAD_METAC2, ., 7, ., 7, ., 30.32430.80110.9038yesno
Q8PZN4COAD_METMA2, ., 7, ., 7, ., 30.33100.80110.9155yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7.30.979
3rd Layer2.7.70.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.3__3433__AT2G18250.1
annotation not avaliable (176 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.3__1991__AT3G18030.1
annotation not avaliable (209 aa)
     •• 0.672
fgenesh2_kg.7__948__AT4G32180.1
annotation not avaliable (902 aa)
     •• 0.637
fgenesh2_kg.2__418__AT1G60440.1
annotation not avaliable (384 aa)
     •• 0.593
scaffold_403718.1
annotation not avaliable (352 aa)
• •     0.538
fgenesh2_kg.4__710__AT2G27490.2
annotation not avaliable (232 aa)
     •• 0.462
scaffold_103330.1
annotation not avaliable (130 aa)
  •     0.416
fgenesh1_pm.C_scaffold_8000419
annotation not avaliable (231 aa)
     •• 0.412

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
PLN02388177 PLN02388, PLN02388, phosphopantetheine adenylyltra 1e-108
cd02164143 cd02164, PPAT_CoAS, phosphopantetheine adenylyltra 2e-66
COG1019158 COG1019, COG1019, Predicted nucleotidyltransferase 3e-41
PRK00777153 PRK00777, PRK00777, phosphopantetheine adenylyltra 2e-39
PRK01170 322 PRK01170, PRK01170, phosphopantetheine adenylyltra 2e-18
cd02039143 cd02039, cytidylyltransferase_like, Cytidylyltrans 3e-13
pfam01467148 pfam01467, CTP_transf_2, Cytidylyltransferase 6e-11
TIGR0012566 TIGR00125, cyt_tran_rel, cytidyltransferase-like d 3e-08
COG0615140 COG0615, TagD, Cytidylyltransferase [Cell envelope 4e-05
cd02170136 cd02170, cytidylyltransferase, cytidylyltransferas 1e-04
>gnl|CDD|215218 PLN02388, PLN02388, phosphopantetheine adenylyltransferase Back     alignment and domain information 
 Score =  304 bits (781), Expect = e-108
 Identities = 140/172 (81%), Positives = 157/172 (91%)

Query: 3   MAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML 62
           M  + +SV +S +SP NSYGAVVLGGTFDRLHDGHRLFLKA+AELARDRIV+GVCDGPML
Sbjct: 1   MVTVKDSVADSKLSPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPML 60

Query: 63  TNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETL 122
           + KQFAELIQP++ERM NVE YIKSIKPELVVQ EPI DPYGPSIVDENLEAIVVSKETL
Sbjct: 61  SKKQFAELIQPIEERMHNVEEYIKSIKPELVVQAEPIIDPYGPSIVDENLEAIVVSKETL 120

Query: 123 PGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKAKNEQ 174
           PGGLSVNKKRA+RGLSQLKIEVVD+V E S+G+KLSS+TLR+LEAEKA  ++
Sbjct: 121 PGGLSVNKKRAERGLSQLKIEVVDIVPEESTGNKLSSTTLRRLEAEKAVKQK 172

Length = 177
>gnl|CDD|173915 cd02164, PPAT_CoAS, phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes Back     alignment and domain information
>gnl|CDD|223950 COG1019, COG1019, Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|234834 PRK00777, PRK00777, phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|234912 PRK01170, PRK01170, phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|185678 cd02039, cytidylyltransferase_like, Cytidylyltransferase-like domain Back     alignment and domain information
>gnl|CDD|216517 pfam01467, CTP_transf_2, Cytidylyltransferase Back     alignment and domain information
>gnl|CDD|232837 TIGR00125, cyt_tran_rel, cytidyltransferase-like domain Back     alignment and domain information
>gnl|CDD|223688 COG0615, TagD, Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] Back     alignment and domain information
>gnl|CDD|173921 cd02170, cytidylyltransferase, cytidylyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 176
PLN02388177 phosphopantetheine adenylyltransferase 100.0
cd02164143 PPAT_CoAS phosphopantetheine adenylyltransferase d 100.0
PRK00777153 phosphopantetheine adenylyltransferase; Provisiona 99.96
COG1019158 Predicted nucleotidyltransferase [General function 99.96
cd02064180 FAD_synthetase_N FAD synthetase, N-terminal domain 99.94
KOG3351293 consensus Predicted nucleotidyltransferase [Genera 99.94
TIGR00083 288 ribF riboflavin kinase/FMN adenylyltransferase. mu 99.94
COG0196 304 RibF FAD synthase [Coenzyme metabolism] 99.94
PRK07143 279 hypothetical protein; Provisional 99.94
PRK01170 322 phosphopantetheine adenylyltransferase/unknown dom 99.93
PRK05627 305 bifunctional riboflavin kinase/FMN adenylyltransfe 99.93
PF06574157 FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof 99.93
cd02170136 cytidylyltransferase cytidylyltransferase. The cyt 99.87
cd02169297 Citrate_lyase_ligase Citrate lyase ligase. Citrate 99.86
TIGR02199144 rfaE_dom_II rfaE bifunctional protein, domain II. 99.86
cd02171129 G3P_Cytidylyltransferase glycerol-3-phosphate cyti 99.86
TIGR01518125 g3p_cytidyltrns glycerol-3-phosphate cytidylyltran 99.84
cd02172144 RfaE_N N-terminal domain of RfaE. RfaE is a protei 99.84
cd02039143 cytidylyltransferase_like Cytidylyltransferase-lik 99.83
smart00764182 Citrate_ly_lig Citrate lyase ligase C-terminal dom 99.82
COG1057197 NadD Nicotinic acid mononucleotide adenylyltransfe 99.73
PRK08887174 nicotinic acid mononucleotide adenylyltransferase; 99.72
PRK00168159 coaD phosphopantetheine adenylyltransferase; Provi 99.72
PRK00071203 nadD nicotinic acid mononucleotide adenylyltransfe 99.72
PRK13964140 coaD phosphopantetheine adenylyltransferase; Provi 99.71
cd02163153 PPAT Phosphopantetheine adenylyltransferase. Phosp 99.7
TIGR01527165 arch_NMN_Atrans nicotinamide-nucleotide adenylyltr 99.69
TIGR00482193 nicotinate (nicotinamide) nucleotide adenylyltrans 99.68
TIGR01510155 coaD_prev_kdtB pantetheine-phosphate adenylyltrans 99.68
PTZ00308 353 ethanolamine-phosphate cytidylyltransferase; Provi 99.68
cd02168181 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide 99.67
cd02166163 NMNAT_Archaea Nicotinamide/nicotinate mononucleoti 99.67
PRK06973243 nicotinic acid mononucleotide adenylyltransferase; 99.67
cd02174150 CCT CTP:phosphocholine cytidylyltransferase. CTP:p 99.65
PRK05379 340 bifunctional nicotinamide mononucleotide adenylylt 99.63
cd02167158 NMNAT_NadR Nicotinamide/nicotinate mononucleotide 99.62
cd02165192 NMNAT Nicotinamide/nicotinate mononucleotide adeny 99.62
PRK07152 342 nadD putative nicotinate-nucleotide adenylyltransf 99.61
COG0669159 CoaD Phosphopantetheine adenylyltransferase [Coenz 99.61
cd02173152 ECT CTP:phosphoethanolamine cytidylyltransferase ( 99.61
PRK01153174 nicotinamide-nucleotide adenylyltransferase; Provi 99.59
COG0615140 TagD Cytidylyltransferase [Cell envelope biogenesi 99.58
PF01467157 CTP_transf_2: Cytidylyltransferase; InterPro: IPR0 99.57
PRK13793196 nicotinamide-nucleotide adenylyltransferase; Provi 99.55
PRK08099 399 bifunctional DNA-binding transcriptional repressor 99.52
TIGR0012566 cyt_tran_rel cytidyltransferase-related domain. Pr 99.51
PLN02945236 nicotinamide-nucleotide adenylyltransferase/nicoti 99.47
PRK11316473 bifunctional heptose 7-phosphate kinase/heptose 1- 99.46
PTZ00308353 ethanolamine-phosphate cytidylyltransferase; Provi 99.44
PLN02406 418 ethanolamine-phosphate cytidylyltransferase 99.43
cd09286225 NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti 99.4
PLN02413 294 choline-phosphate cytidylyltransferase 99.37
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 99.36
TIGR00124332 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP 99.36
PLN02406418 ethanolamine-phosphate cytidylyltransferase 99.33
TIGR01526 325 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr 99.29
PRK00380281 panC pantoate--beta-alanine ligase; Reviewed 99.26
cd00560277 PanC Pantoate-beta-alanine ligase. PanC Pantoate-b 99.24
COG1056172 NadR Nicotinamide mononucleotide adenylyltransfera 99.2
PF08218182 Citrate_ly_lig: Citrate lyase ligase C-terminal do 99.03
COG2870467 RfaE ADP-heptose synthase, bifunctional sugar kina 98.93
KOG2803 358 consensus Choline phosphate cytidylyltransferase/P 98.77
PRK13670 388 hypothetical protein; Provisional 98.76
KOG2803358 consensus Choline phosphate cytidylyltransferase/P 98.62
COG3053352 CitC Citrate lyase synthetase [Energy production a 98.4
TIGR00018 282 panC pantoate--beta-alanine ligase. This family is 98.4
TIGR00339383 sopT ATP sulphurylase. Members of this family also 98.4
PLN02660 284 pantoate--beta-alanine ligase 98.32
PRK13671 298 hypothetical protein; Provisional 98.07
COG2046397 MET3 ATP sulfurylase (sulfate adenylyltransferase) 97.91
PF01747215 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002 97.65
cd00517353 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also 97.62
KOG2804 348 consensus Phosphorylcholine transferase/cholinepho 97.59
PRK04149391 sat sulfate adenylyltransferase; Reviewed 97.55
PRK05537 568 bifunctional sulfate adenylyltransferase subunit 1 97.16
PF05636 388 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPr 97.04
COG1323 358 Predicted nucleotidyltransferase [General function 96.08
COG0414 285 PanC Panthothenate synthetase [Coenzyme metabolism 95.92
PRK13477 512 bifunctional pantoate ligase/cytidylate kinase; Pr 94.9
KOG3199234 consensus Nicotinamide mononucleotide adenylyl tra 94.64
PF02569 280 Pantoate_ligase: Pantoate-beta-alanine ligase; Int 89.87
>PLN02388 phosphopantetheine adenylyltransferase Back     alignment and domain information 
Probab=100.00  E-value=2.9e-38  Score=241.17  Aligned_cols=173  Identities=82%  Similarity=1.228  Sum_probs=154.6

Q ss_pred             ccccccccccCCCCCCCCCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHH
Q 030486            3 MAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVE   82 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~   82 (176)
                      |.-..+|++-++.++.+.++.++++|+|||+|.||+.||++|.+.+++.++++++.++.+.+++.+..++|+++|.+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~   80 (177)
T PLN02388          1 MVTVKDSVADSKLSPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVE   80 (177)
T ss_pred             CcccccccccccCCCCCcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHH
Confidence            44567899999999999999999999999999999999999999997778888888887655555678999999999999


Q ss_pred             HHHHhcCCCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHH
Q 030486           83 AYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTL  162 (176)
Q Consensus        83 ~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~I  162 (176)
                      +++..+.|+..+++.+|.|+|||+.+..++++|||++|+..|+..+|+.|++.|++++++.+|+++..+.++.+||||+|
T Consensus        81 ~fl~~~~p~~~~~i~~i~D~~Gpt~~~~~~d~LVVS~ET~~g~~~IN~~R~e~Gl~pL~i~~v~~v~~~~~~~kiSST~i  160 (177)
T PLN02388         81 EYIKSIKPELVVQAEPIIDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRAERGLSQLKIEVVDIVPEESTGNKLSSTTL  160 (177)
T ss_pred             HHHHHcCCCceEEEEEecCCCCCcccCCCCCEEEEcHhHhhhHHHHHHHHHHCCCCCeEEEEEEeEecCCCCCccCHHHH
Confidence            99999998888888899999999998889999999999999999999999999999999999999886445899999999


Q ss_pred             HHHHHhhcc-ccCC
Q 030486          163 RKLEAEKAK-NEQP  175 (176)
Q Consensus       163 R~~i~~g~~-~~~~  175 (176)
                      |+++.+..+ ++||
T Consensus       161 R~~~~~~~~~~~~~  174 (177)
T PLN02388        161 RRLEAEKAVKQKQP  174 (177)
T ss_pred             HHHHHHHHHhcccc
Confidence            999976443 4454

>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes Back     alignment and domain information
>PRK00777 phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>COG1019 Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme Back     alignment and domain information
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase Back     alignment and domain information
>COG0196 RibF FAD synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK07143 hypothetical protein; Provisional Back     alignment and domain information
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional Back     alignment and domain information
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed Back     alignment and domain information
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2 Back     alignment and domain information
>cd02170 cytidylyltransferase cytidylyltransferase Back     alignment and domain information
>cd02169 Citrate_lyase_ligase Citrate lyase ligase Back     alignment and domain information
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II Back     alignment and domain information
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase Back     alignment and domain information
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase Back     alignment and domain information
>cd02172 RfaE_N N-terminal domain of RfaE Back     alignment and domain information
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain Back     alignment and domain information
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain Back     alignment and domain information
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>cd02163 PPAT Phosphopantetheine adenylyltransferase Back     alignment and domain information
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase Back     alignment and domain information
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial Back     alignment and domain information
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain Back     alignment and domain information
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal Back     alignment and domain information
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>cd02174 CCT CTP:phosphocholine cytidylyltransferase Back     alignment and domain information
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional Back     alignment and domain information
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins Back     alignment and domain information
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated Back     alignment and domain information
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT) Back     alignment and domain information
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] Back     alignment and domain information
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT) Back     alignment and domain information
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional Back     alignment and domain information
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain Back     alignment and domain information
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>PLN02406 ethanolamine-phosphate cytidylyltransferase Back     alignment and domain information
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>PLN02413 choline-phosphate cytidylyltransferase Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase Back     alignment and domain information
>PLN02406 ethanolamine-phosphate cytidylyltransferase Back     alignment and domain information
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type Back     alignment and domain information
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed Back     alignment and domain information
>cd00560 PanC Pantoate-beta-alanine ligase Back     alignment and domain information
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6 Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK13670 hypothetical protein; Provisional Back     alignment and domain information
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism] Back     alignment and domain information
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion] Back     alignment and domain information
>TIGR00018 panC pantoate--beta-alanine ligase Back     alignment and domain information
>TIGR00339 sopT ATP sulphurylase Back     alignment and domain information
>PLN02660 pantoate--beta-alanine ligase Back     alignment and domain information
>PRK13671 hypothetical protein; Provisional Back     alignment and domain information
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2 Back     alignment and domain information
>cd00517 ATPS ATP-sulfurylase Back     alignment and domain information
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK04149 sat sulfate adenylyltransferase; Reviewed Back     alignment and domain information
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated Back     alignment and domain information
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function Back     alignment and domain information
>COG1323 Predicted nucleotidyltransferase [General function prediction only] Back     alignment and domain information
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism] Back     alignment and domain information
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional Back     alignment and domain information
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
3do8_A148 The Crystal Structure Of The Protein With Unknown F 6e-11
>pdb|3DO8|A Chain A, The Crystal Structure Of The Protein With Unknown Function From Archaeoglobus Fulgidus Length = 148 Back     alignment and structure 
Iteration: 1

 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 24  VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
           V LGGTF+ LH+GH+  +  + +L    I +GV    M   +  + L  P   R  NV+ 
Sbjct: 3   VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVL--PFAIRAENVKR 60
Query: 84  YI---KSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQL 140
           Y+      +PE+V     IT+PYG ++ D + E +VVS ET    L +N+KR + G  ++
Sbjct: 61  YVMRKYGFEPEIV----KITNPYGKTL-DVDFEYLVVSPETYEMALKINQKREELGKRKI 115
Query: 141 KIEVVDLV 148
            I  VD +
Sbjct: 116 TIVKVDWM 123

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
3do8_A148 Phosphopantetheine adenylyltransferase; protein wi 5e-44
1lw7_A 365 Transcriptional regulator NADR; NMN, NMN adenylyl 8e-06
2b7l_A132 Glycerol-3-phosphate cytidylyltransferase; rossman 5e-05
3elb_A341 Ethanolamine-phosphate cytidylyltransferase; kenne 7e-05
2f6r_A 281 COA synthase, bifunctional coenzyme A synthase; 18 8e-05
1coz_A129 Protein (glycerol-3-phosphate cytidylyltransferase 1e-04
1f9a_A168 Hypothetical protein MJ0541; alpha/beta, transfera 2e-04
3hl4_A236 Choline-phosphate cytidylyltransferase A; rossmann 5e-04
1ej2_A181 Nicotinamide mononucleotide adenylyltransferase; d 8e-04
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus} Length = 148 Back     alignment and structure
 Score =  142 bits (358), Expect = 5e-44
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 24  VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
           V LGGTF+ LH+GH+  +  + +L    I +GV    M   +  +    P   R  NV+ 
Sbjct: 3   VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSV--LPFAIRAENVKR 60

Query: 84  YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIE 143
           Y+   K     +   IT+PYG ++ D + E +VVS ET    L +N+KR + G  ++ I 
Sbjct: 61  YVMR-KYGFEPEIVKITNPYGKTL-DVDFEYLVVSPETYEMALKINQKREELGKRKITIV 118

Query: 144 VVDLVSEGSSGDKLSSSTLRKLEAEKAKN 172
            VD +     G  +SS+ +++ E ++   
Sbjct: 119 KVDWM-MAEDGKPISSTRIKRGEIDRYGG 146
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Length = 365 Back     alignment and structure
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus} Length = 132 Back     alignment and structure
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} Length = 341 Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Length = 281 Back     alignment and structure
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A* Length = 129 Back     alignment and structure
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3 Length = 168 Back     alignment and structure
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus} Length = 236 Back     alignment and structure
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A* Length = 181 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
3op1_A 308 Macrolide-efflux protein; structural genomics, PSI 99.94
3do8_A148 Phosphopantetheine adenylyltransferase; protein wi 99.94
2x0k_A 338 Riboflavin biosynthesis protein RIBF; riboflavin k 99.93
1mrz_A 293 Riboflavin kinase/FMN adenylyltransferase; rossman 99.92
3glv_A143 Lipopolysaccharide core biosynthesis protein; stru 99.91
1o6b_A169 Phosphopantetheine adenylyltransferase; structural 99.85
1qjc_A158 Phosphopantetheine adenylyltransferase; coenzyme A 99.84
2b7l_A132 Glycerol-3-phosphate cytidylyltransferase; rossman 99.84
2qtr_A189 Nicotinate (nicotinamide) nucleotide adenylyltran; 99.82
1coz_A129 Protein (glycerol-3-phosphate cytidylyltransferase 99.81
3k9w_A187 Phosphopantetheine adenylyltransferase; niaid, ssg 99.81
1kam_A194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 99.79
1od6_A160 PPAT, phosphopantetheine adenylyltransferase; coen 99.79
4f3r_A162 Phosphopantetheine adenylyltransferase; phosphopan 99.75
3f3m_A168 Phosphopantetheine adenylyltransferase; PPAT, coen 99.74
1ej2_A181 Nicotinamide mononucleotide adenylyltransferase; d 99.74
3nv7_A157 Phosphopantetheine adenylyltransferase; helicobact 99.73
3h05_A177 Uncharacterized protein VPA0413; nucleotidylyl, tr 99.73
2h29_A189 Probable nicotinate-nucleotide adenylyltransferase 99.72
3nbk_A177 Phosphopantetheine adenylyltransferase; PPAT, PHP; 99.71
1k4m_A213 NAMN adenylyltransferase; nucleotidyltransferase; 99.71
3nd5_A171 Phosphopantetheine adenylyltransferase; PPAT, coen 99.7
3hl4_A236 Choline-phosphate cytidylyltransferase A; rossmann 99.7
2qjo_A 341 Bifunctional NMN adenylyltransferase/nudix hydrol; 99.68
3elb_A 341 Ethanolamine-phosphate cytidylyltransferase; kenne 99.67
1yum_A242 'probable nicotinate-nucleotide adenylyltransferas 99.67
1vlh_A173 Phosphopantetheine adenylyltransferase; TM0741, st 99.65
1f9a_A168 Hypothetical protein MJ0541; alpha/beta, transfera 99.63
2ejc_A280 Pantoate--beta-alanine ligase; X-RAY diffraction, 99.6
1nup_A252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 99.59
1kqn_A 279 Nmnat, nicotinamide mononucleotide adenylyl transf 99.57
1lw7_A 365 Transcriptional regulator NADR; NMN, NMN adenylyl 99.48
2qjt_B 352 Nicotinamide-nucleotide adenylyltransferase; two i 99.48
3elb_A341 Ethanolamine-phosphate cytidylyltransferase; kenne 99.43
1v8f_A276 Pantoate-beta-alanine ligase; rossmann fold, dimer 99.4
3gmi_A 357 UPF0348 protein MJ0951; protein with unknown funct 99.4
3ag6_A283 Pantothenate synthetase; ATP-dependent enzyme, ATP 99.31
1jhd_A396 Sulfate adenylyltransferase; sulfurylase, APS, che 99.1
3cov_A301 Pantothenate synthetase; pantothenate biosynthesis 99.1
1v47_A349 ATP sulfurylase; product binding complex, zinc, ri 99.03
1r6x_A395 ATP:sulfate adenylyltransferase; APS kinase-like d 97.88
3uk2_A 283 Pantothenate synthetase; AMP, structural genomics, 97.64
1g8f_A 511 Sulfate adenylyltransferase; alpha-beta protein, b 97.51
3inn_A 314 Pantothenate synthetase; ssgcid, SBRI, UW, decode, 97.41
2gks_A 546 Bifunctional SAT/APS kinase; transferase, sulfuryl 97.25
1m8p_A 573 Sulfate adenylyltransferase; rossmann fold, phosph 96.96
1x6v_B630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 96.47
3cr8_A 552 Sulfate adenylyltranferase, adenylylsulfate kinase 96.34
3q12_A 287 Pantoate--beta-alanine ligase; structural genomics 95.44
3mxt_A 285 Pantothenate synthetase; alpha-beta-alpha, structu 87.59
3n8h_A264 Pantothenate synthetase; alpha-beta sandwich, liga 87.18
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Back     alignment and structure
Probab=99.94  E-value=3e-28  Score=200.08  Aligned_cols=138  Identities=22%  Similarity=0.232  Sum_probs=105.7

Q ss_pred             CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCC--eEEEEccCCC----CCC--cCcCCCCCCHHHHHHHHHHH--------
Q 030486           21 YGAVVLGGTFDRLHDGHRLFLKASAELARDR--IVVGVCDGPM----LTN--KQFAELIQPVDERMRNVEAY--------   84 (176)
Q Consensus        21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~--~~v~vt~~~~----~~~--k~~~~~l~~~~eR~~~l~~~--------   84 (176)
                      .++++++|+|||+|+|||+||++|++.|++.  .++++||++.    +.+  .+.+.+|+|.++|.++++++        
T Consensus        20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lGVD~v~~~   99 (308)
T 3op1_A           20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLL   99 (308)
T ss_dssp             SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHTCCEEEEE
T ss_pred             CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcCCCEEEEe
Confidence            4689999999999999999999999998754  4678899862    222  12346799999999999987        


Q ss_pred             -----HHhcCCCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhhhh---hHHhCCCCceeEEEEeeeecCCCCCe
Q 030486           85 -----IKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNK---KRADRGLSQLKIEVVDLVSEGSSGDK  156 (176)
Q Consensus        85 -----~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~---~~~~~~~~~l~v~~v~~~~~~~~~~~  156 (176)
                           ++.++|++|++.+ +        ..++++.+|||+||+||. +.++   ++..+.  . ++.+++.+.  .++.+
T Consensus       100 ~F~~~~a~ls~e~Fv~~l-l--------~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~--~-~V~~v~~~~--~~~~~  164 (308)
T 3op1_A          100 DFSSQFASLTAQEFFATY-I--------KAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFD--G-EVIIVPPVE--DEKGK  164 (308)
T ss_dssp             CCCHHHHTCCHHHHHHHH-H--------HHHTEEEEEEETTCCBTT-TTBCSTTHHHHCS--S-EEEEECCCB--CSSCB
T ss_pred             cCCHHHHcCCHHHHHHHH-H--------HHcCCCEEEECcCCCCCC-cCCCHHHHHHhCC--C-CEEEeCCEe--cCCce
Confidence                 4567777777521 1        145899999999999996 4422   333332  2 677788766  36889


Q ss_pred             eehHHHHHHHHhhcccc
Q 030486          157 LSSSTLRKLEAEKAKNE  173 (176)
Q Consensus       157 ISST~IR~~i~~g~~~~  173 (176)
                      ||||+||++|.+|++.+
T Consensus       165 ISST~IR~~L~~G~v~~  181 (308)
T 3op1_A          165 ISSTRIRQAILDGNVKE  181 (308)
T ss_dssp             CCHHHHHHHHHHTCHHH
T ss_pred             EeHHHHHHHHHcCCHHH
Confidence            99999999999999865
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus} Back     alignment and structure
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Back     alignment and structure
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Back     alignment and structure
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1} Back     alignment and structure
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3 Back     alignment and structure
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A Back     alignment and structure
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus} Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Back     alignment and structure
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A* Back     alignment and structure
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A* Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Back     alignment and structure
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3 Back     alignment and structure
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii} Back     alignment and structure
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0 Back     alignment and structure
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A* Back     alignment and structure
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A* Back     alignment and structure
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Back     alignment and structure
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A* Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Back     alignment and structure
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A* Back     alignment and structure
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus} Back     alignment and structure
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP} Back     alignment and structure
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} Back     alignment and structure
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Back     alignment and structure
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3 Back     alignment and structure
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3 Back     alignment and structure
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima} Back     alignment and structure
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Back     alignment and structure
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B Back     alignment and structure
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} Back     alignment and structure
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A Back     alignment and structure
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii} Back     alignment and structure
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A* Back     alignment and structure
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ... Back     alignment and structure
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0 Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis} Back     alignment and structure
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} Back     alignment and structure
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Back     alignment and structure
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A* Back     alignment and structure
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A* Back     alignment and structure
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 176
d1lw7a1163 c.26.1.3 (A:57-219) Transcriptional regulator NadR 3e-08
d1mrza2157 c.26.1.3 (A:2-158) FMN adenylyltransferase domain 3e-06
d1k4ma_213 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 4e-05
d1kama_189 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 1e-04
d1ej2a_167 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 4e-04
d1f9aa_164 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 7e-04
d1qjca_157 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 0.004
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Length = 163 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Transcriptional regulator NadR, NMN-adenylyltransferase domain
species: Haemophilus influenzae [TaxId: 727]

 Score = 48.3 bits (114), Expect = 3e-08
 Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 17/153 (11%)

Query: 24  VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFA----ELIQPVDERMR 79
            V+ G F  +H GH   +  +     D + V VC   +   K F     + +  V +R+R
Sbjct: 5   GVIFGKFYPVHTGHINMIYEAFSKV-DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLR 63

Query: 80  NVEAYIKSIKPELVVQTE--------PITDPYGPSIVDENLEAIVVSKETLPGGLSVNKK 131
            ++   K  K ++ +           P         V             +        +
Sbjct: 64  WMQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSS---EPQ 120

Query: 132 RADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRK 164
                   L +EV  +  +  +   +S++ +R 
Sbjct: 121 DKAPYEKYLGLEVSLVDPD-RTFFNVSATKIRT 152
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Length = 157 Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 213 Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 189 Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 167 Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 164 Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 157 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
d1mrza2157 FMN adenylyltransferase domain of bifunctional FAD 99.96
d1coza_126 CTP:glycerol-3-phosphate cytidylyltransferase {Bac 99.78
d1f9aa_164 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.76
d1ej2a_167 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.72
d1o6ba_163 Phosphopantetheine adenylyltransferase {Bacillus s 99.59
d1lw7a1163 Transcriptional regulator NadR, NMN-adenylyltransf 99.59
d1qjca_157 Phosphopantetheine adenylyltransferase {Escherichi 99.59
d1od6a_160 Phosphopantetheine adenylyltransferase {Thermus th 99.56
d1tfua_157 Phosphopantetheine adenylyltransferase {Mycobacter 99.56
d1vlha_157 Phosphopantetheine adenylyltransferase {Thermotoga 99.52
d1nuua_233 Cytosolic NMN/NAMN adenylyltransferase {Human (Hom 99.48
d1kr2a_ 271 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.46
d1jhda2223 ATP sulfurylase catalytic domain {Sulfur-oxidizing 99.44
d1kama_189 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.43
d1k4ma_213 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.41
d1v47a2214 ATP sulfurylase catalytic domain {Thermus thermoph 97.65
d1g8fa2221 ATP sulfurylase catalytic domain {Baker's yeast (S 97.52
d1x6va2235 ATP sulfurylase catalytic domain {Human (Homo sapi 96.99
d1v8fa_ 276 Pantothenate synthetase (Pantoate-beta-alanine lig 91.02
d1ihoa_ 282 Pantothenate synthetase (Pantoate-beta-alanine lig 88.25
d2a84a1 286 Pantothenate synthetase (Pantoate-beta-alanine lig 86.94
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=5.9e-30  Score=190.40  Aligned_cols=137  Identities=26%  Similarity=0.299  Sum_probs=98.3

Q ss_pred             EEEeCcCCcCCHHHHHHHHHHHHHhcC--CeEEEEccC--CCCCCcCcCCCCCCHHHHHHHHHHH----------HHhcC
Q 030486           24 VVLGGTFDRLHDGHRLFLKASAELARD--RIVVGVCDG--PMLTNKQFAELIQPVDERMRNVEAY----------IKSIK   89 (176)
Q Consensus        24 vv~~G~FDgvH~GH~~ll~~a~~~~~~--~~~v~vt~~--~~~~~k~~~~~l~~~~eR~~~l~~~----------~~~~~   89 (176)
                      |+++|+|||+|+|||+||++|.+.+.+  ...+++||+  +.+..++.+..+++.++|.++++++          ++.++
T Consensus         1 VvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~~~~~~~~l~~~~~k~~~l~~~g~~~~l~f~~~~~ls   80 (157)
T d1mrza2           1 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYARTVVLDFFRIKDLT   80 (157)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTSCEEEECHHHHTTCC
T ss_pred             CEEEEcccchhHHHHHHHHHHHHHHHHcCCCceEeecCCCchheEeccccccccHHHhhhhhhcccceeeehhhhHhhhh
Confidence            589999999999999999999988743  233445554  2111223456789999999998765          44556


Q ss_pred             CCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhh
Q 030486           90 PELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEK  169 (176)
Q Consensus        90 ~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g  169 (176)
                      |++|++.+           ..++++||||+||+||.++.++...... ...++.+++.+..  ++.+||||+||++|.+|
T Consensus        81 ~~~Fi~~~-----------l~~~~~ivvG~Df~FG~~r~G~~~~Lk~-~g~~v~~i~~~~~--~~~~ISST~IR~~l~~G  146 (157)
T d1mrza2          81 PEGFVERY-----------LSGVSAVVVGRDFRFGKNASGNASFLRK-KGVEVYEIEDVVV--QGKRVSSSLIRNLVQEG  146 (157)
T ss_dssp             HHHHHHHH-----------CTTCCEEEEETTCCBSGGGCBCHHHHHH-TTCEEEEECCCEE--TTEECCHHHHHHHHHTT
T ss_pred             hhHHHHHH-----------hhcCcEEEEecCcccccccccchhhhcc-ceeEEEeeccEee--CCcEEcHHHHHHHHHcC
Confidence            66666421           1368999999999999766544333221 1246677776653  78999999999999999


Q ss_pred             ccccC
Q 030486          170 AKNEQ  174 (176)
Q Consensus       170 ~~~~~  174 (176)
                      ++.+.
T Consensus       147 ~i~~A  151 (157)
T d1mrza2         147 RVEEI  151 (157)
T ss_dssp             CTTTT
T ss_pred             CHHHH
Confidence            99874
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Back     information, alignment and structure
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure