Citrus Sinensis ID: 030494

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcHHHHHHHHHHHHHHHHcHEEEEHccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mfasrpavhpveapplteaaGLRVrmkdvqgmpgtpgGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISndlnrcginhctRFETATAMAFISWFATSPSFLLNFWSLASH
Flexible Loop (DISEMBL)
mfasrpavhpveapplteaaGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRrslrndkviRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Low Complexity Region (SEG)
MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYlvlalglqslwslsllvlDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Disordered region (IsUnstruct)
*********************************GTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSL***
Disordered Region (DISOPRED)
*****PA**PVEAPPLTEAAG**VRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Disordered Region (DISEMBL)
*********PVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Disordered Region (DISPRO)
**********VEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	176	2.2.26 [Sep-21-2011]
P0DI68	178	CASP-like protein 1 OS=Br	yes	no	1.0	0.988	0.662	5e-63
P0DI70	176	CASP-like protein 2 OS=Gi	N/A	no	0.994	0.994	0.68	1e-62
Q6NPF8	180	CASP-like protein At2g372	yes	no	0.994	0.972	0.716	4e-62
Q9SKN3	179	CASP-like protein At2g283	no	no	1.0	0.983	0.659	8e-58
P0DI27	180	CASP-like protein PtaqCon	N/A	no	0.994	0.972	0.617	6e-57
P0DI69	177	CASP-like protein 1 OS=Gi	N/A	no	0.988	0.983	0.614	9e-57
D8QNI1	176	CASP-like protein SELMODR	N/A	no	0.994	0.994	0.577	3e-50
B4FNS3	190	CASP-like protein 15 OS=Z	N/A	no	1.0	0.926	0.610	1e-49
P0DI66	181	CASP-like protein 17 OS=Z	N/A	no	0.988	0.961	0.547	1e-49
Q10Q78	178	CASP-like protein Os03g02	yes	no	0.994	0.983	0.661	1e-49

>sp|P0DI68|CSPL1_BRADI CASP-like protein 1 OS=Brachypodium distachyon PE=2 SV=1

 Score =  239 bits (611), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 2/178 (1%)

Query: 1   MFASRPAVHPVEAPPLTEAAG--LRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMAS 58
           MFASRPAVHPVEAPP T+       V MKD+ GMPGT GGL LR+ QFVFA +A++VMAS
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 59  TSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTL 118
           TSDF   TAFCYLV A  +Q LWS SL ++DIYA+LV+R LRN + + LF +GDGIT+ L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 119 TYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           T+ AACSSAGITVLI NDLN C  NHC  F+TATA+AF+SWFA +PSFLLNFWS+A+ 
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

Brachypodium distachyon (taxid: 15368)

>sp|P0DI70|CSPL2_GINBI CASP-like protein 2 OS=Ginkgo biloba GN=gba_locus_10451 PE=3 SV=1

 Score =  238 bits (608), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 133/175 (76%)

Query: 1   MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTS 60
           M  S PAVHPVEAPP       RVRMKD QGMPGT GGL LRL QF FA +A S+M ST 
Sbjct: 1   MNPSHPAVHPVEAPPTDVHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLSTD 60

Query: 61  DFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTY 120
           DF   TAFCYLV A  LQ LWSL+L V+D YA+LV+RSLRN  V+ LF VGDG+T+TLT+
Sbjct: 61  DFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATLTF 120

Query: 121 AAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
           AAAC+SAGITVLI NDL  C  NHC ++ETATAMAF+SWF  SPSFLL FW LAS
Sbjct: 121 AAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLAS 175

Ginkgo biloba (taxid: 3311)

>sp|Q6NPF8|CSPL9_ARATH CASP-like protein At2g37200 OS=Arabidopsis thaliana GN=At2g37200 PE=2 SV=1

 Score =  236 bits (603), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/180 (71%), Positives = 149/180 (82%), Gaps = 5/180 (2%)

Query: 1   MFASRPAVHPVEAPPLTEAAGL----RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVM 56
           M  SRPA+HPV+A P+   AG      VRMKDVQGMPGT GGL+LRL QFV A I+VSVM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 57  ASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITS 116
            +TSDF  ATAFC LVLA+ LQSLWSLSL ++D YA+LVRRSLRN  V++ FT+GDG+TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 117 TLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           TLT+AAA +SAGITVLI NDL +C +NHCTRFETATAMAFISWFA SPSF+LNFWSLA+H
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH 180

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SKN3|CSPL6_ARATH CASP-like protein At2g28370 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1

 Score =  222 bits (566), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 118/179 (65%), Positives = 140/179 (78%), Gaps = 3/179 (1%)

Query: 1   MFASRPAVHPVEAPPL--TEAAGL-RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMA 57
           M  S  +VHPVE PP   TE     RVRM D++GMPGT  GL LR  QF+FAA A+ VMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 58  STSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITST 117
           STSDF   TAFCYLV A GLQSLWSL+L ++D+YAI+V+RSL+N +++ LF +GDG+TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 118 LTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           LT+AAAC+SAGITVLI NDLN C  NHC +FET+TA+AFISWFA  PSFL NFWSLAS 
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

Arabidopsis thaliana (taxid: 3702)

>sp|P0DI27|CSPL6_PTEAA CASP-like protein PtaqContig9166 OS=Pteridium aquilinum subsp. aquilinum GN=PtaqContig9166 PE=3 SV=1

 Score =  219 bits (558), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 108/175 (61%), Positives = 127/175 (72%)

Query: 1   MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTS 60
           M  S PAVHPV  PP+      RVRMKD QGMPGT GGL LRL Q  FA ++ S+M ST 
Sbjct: 1   MEVSHPAVHPVAVPPVLTEPPARVRMKDYQGMPGTLGGLALRLGQLGFAVLSFSIMVSTP 60

Query: 61  DFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTY 120
           DF + TAFCYLV A  LQ+LWS    V+DIYA+ VRRSL +  ++ LF VGDG+TSTLT+
Sbjct: 61  DFSQVTAFCYLVAATVLQTLWSSITAVVDIYALSVRRSLHHSLLVGLFAVGDGVTSTLTF 120

Query: 121 AAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
           AAAC++AGITVLI NDL+ CG NHC RFE A AMAF+SW   +PSFLL FWS  +
Sbjct: 121 AAACATAGITVLIDNDLDECGQNHCGRFEAAAAMAFLSWIMAAPSFLLAFWSFGN 175

Pteridium aquilinum subsp. aquilinum (taxid: 104588)

>sp|P0DI69|CSPL1_GINBI CASP-like protein 1 OS=Ginkgo biloba GN=gba_locus_19756 PE=2 SV=1

 Score =  219 bits (557), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 110/179 (61%), Positives = 134/179 (74%), Gaps = 5/179 (2%)

Query: 1   MFASRPAVHPVEAPPLTEAAGL---RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMA 57
           M AS PAVHPV  PP    AG    R+RMK++QGMPGT GGL+LRL QF FA +A S+M 
Sbjct: 1   MNASHPAVHPVGVPP--AVAGQLPPRMRMKEIQGMPGTIGGLLLRLGQFCFALVAFSIMV 58

Query: 58  STSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITST 117
           S  +F   TAFCYLV A  LQ LWSL+L ++D YA+LV+RSLRN  ++ L  VGDG+T+T
Sbjct: 59  SIENFSTVTAFCYLVAATVLQCLWSLALAIIDGYALLVKRSLRNSLLVSLLVVGDGVTAT 118

Query: 118 LTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           LT+AAAC+SAGITVLI NDL +C  NHC R+ETATA+AF+SWF  S SF+L FW LA+ 
Sbjct: 119 LTFAAACASAGITVLIGNDLRQCKENHCARYETATALAFLSWFMVSLSFILTFWLLATR 177

Ginkgo biloba (taxid: 3311)

>sp|D8QNI1|CSPLH_SELML CASP-like protein SELMODRAFT_270224 OS=Selaginella moellendorffii GN=SELMODRAFT_270224 PE=2 SV=1

 Score =  197 bits (501), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/175 (57%), Positives = 123/175 (70%)

Query: 1   MFASRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTS 60
           M AS PAV+PV  PP       RVRMKD +GMP T GGLVLR  QF  A  A+S+M S  
Sbjct: 1   MDASHPAVYPVGVPPTAVDPPPRVRMKDYEGMPSTLGGLVLRSGQFACAVTALSIMISIP 60

Query: 61  DFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTY 120
           DF   TAFCYLV A+ LQ LWS+SL V+D YA+L+RR+L N  ++ L  +GD +TSTL+ 
Sbjct: 61  DFSSVTAFCYLVAAMALQLLWSVSLAVVDGYALLLRRTLHNPVLLSLLVIGDWVTSTLSL 120

Query: 121 AAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
           AAACSSAGITVLI +DL +C  NHC R+E A AMAF++WF  S SF  +FW LA+
Sbjct: 121 AAACSSAGITVLIDSDLAQCAHNHCGRYEAAVAMAFLTWFLVSLSFFFSFWLLAT 175

Selaginella moellendorffii (taxid: 88036)

>sp|B4FNS3|CSPLK_MAIZE CASP-like protein 15 OS=Zea mays PE=2 SV=1

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/190 (61%), Positives = 134/190 (70%), Gaps = 14/190 (7%)

Query: 1   MFASRPAVHPVEAP-------------PLTEAAGLR-VRMKDVQGMPGTPGGLVLRLLQF 46
           M ASRPAVHPVEA               +  AA  R VRMKD  G PGTP GL LRL Q 
Sbjct: 1   MRASRPAVHPVEAAPPPPAAAAEGPEAQVEGAAHPRGVRMKDPPGAPGTPAGLGLRLAQA 60

Query: 47  VFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIR 106
            FAA A++VMAST+DF   +AF YLV A  LQ LWSL L  +DIYA+LV+RSLRN + + 
Sbjct: 61  FFAAAALAVMASTNDFPSVSAFSYLVAAAILQCLWSLLLAFVDIYALLVKRSLRNARAVC 120

Query: 107 LFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSF 166
           +FT+GDGIT T+T  AAC+SAGITVLI NDLN C  NHC  FETATA+AFISWFA +PS 
Sbjct: 121 IFTIGDGITGTITLGAACASAGITVLIGNDLNICAENHCASFETATALAFISWFALAPSC 180

Query: 167 LLNFWSLASH 176
           +LNFWS+AS 
Sbjct: 181 ILNFWSMASR 190

Zea mays (taxid: 4577)

>sp|P0DI66|CSPLM_MAIZE CASP-like protein 17 OS=Zea mays PE=2 SV=1

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 132/179 (73%), Gaps = 5/179 (2%)

Query: 1   MFASRPAVHPVE----APPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVM 56
           MFASRP VHP+E    A P+ + A   V MKD+ GMPGTPGGL LR+LQ +FAAI+++VM
Sbjct: 1   MFASRPVVHPLEVAAPAHPVQQPAP-GVLMKDLPGMPGTPGGLGLRVLQLLFAAISLAVM 59

Query: 57  ASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITS 116
           +ST+DF   +AFCYL+    LQ +WSL++ ++DIYA+LV+R LRN + + LF++GDGIT 
Sbjct: 60  SSTADFASVSAFCYLITTTVLQCVWSLTVAIVDIYALLVKRCLRNRRAVTLFSIGDGITW 119

Query: 117 TLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
            ++ + AC++AGITVLI  DL  C  N C  F+TA AM F+  F+  PSFLLNF+S+AS
Sbjct: 120 LVSLSGACAAAGITVLIDADLIMCSENPCASFQTAVAMGFMCCFSLLPSFLLNFYSIAS 178

Zea mays (taxid: 4577)

>sp|Q10Q78|CSPLV_ORYSJ CASP-like protein Os03g0206600 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1

 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 2/177 (1%)

Query: 1   MFASRPAVHPVEAPPLTEAAGLR--VRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMAS 58
           MFASRPAVHPVEAPP  + A     V MKD+ GMPGT GGL LRL QF FAA+A++VMAS
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 59  TSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTL 118
           T+DF   T+FC+LV A  LQ LWS SL ++DIYA+LV+R LRN + + LF +GDGIT+ L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 119 TYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
           T++AAC+S+GITVLI NDL+ C  NHC  FE+ATAMAF+SWFA SPSFLLNFWS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
255557000	179	conserved hypothetical protein [Ricinus	1.0	0.983	0.730	1e-70
449451006	179	PREDICTED: CASP-like protein 2-like [Cuc	1.0	0.983	0.737	3e-70
225449046	178	PREDICTED: CASP-like protein At2g28370 [	1.0	0.988	0.741	1e-65
297827225	180	hypothetical protein ARALYDRAFT_902856 [	0.994	0.972	0.7	4e-65
351724133	182	uncharacterized protein LOC100527764 [Gl	1.0	0.967	0.681	7e-65
225439988	178	PREDICTED: CASP-like protein At2g28370 [	1.0	0.988	0.730	1e-64
77999281	174	unknown [Solanum tuberosum]	0.977	0.988	0.699	3e-64
351724825	183	uncharacterized protein LOC100526963 [Gl	1.0	0.961	0.655	4e-64
388509100	183	unknown [Lotus japonicus]	1.0	0.961	0.672	6e-64
224140189	180	predicted protein [Populus trichocarpa]	0.982	0.961	0.693	8e-64

>gi|255557000|ref|XP_002519533.1| conserved hypothetical protein [Ricinus communis] gi|223541396|gb|EEF42947.1| conserved hypothetical protein [Ricinus communis]

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/178 (73%), Positives = 150/178 (84%), Gaps = 2/178 (1%)

Query: 1   MFASRPAVHPVEAPPLTEA--AGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMAS 58
           M  SRP VHPVEAPPLT+A   G R+RMK+VQGMPGT GGL LR+ Q VF   +VSVMAS
Sbjct: 2   MNGSRPTVHPVEAPPLTDALQNGPRMRMKEVQGMPGTHGGLTLRIGQLVFGIASVSVMAS 61

Query: 59  TSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTL 118
           TSDF   TAFCYLV+A+ LQ LWSLSL +LD+YA+LVRRSLR   +IRLF +GDGITSTL
Sbjct: 62  TSDFRSVTAFCYLVIAVSLQILWSLSLAILDVYALLVRRSLRKRILIRLFAIGDGITSTL 121

Query: 119 TYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           T+AAAC+SAGITVL+ NDLNRC +NHCT+FETATAMAFISWFA +PSFL+NFWSLA+ 
Sbjct: 122 TFAAACASAGITVLVGNDLNRCSVNHCTKFETATAMAFISWFAMTPSFLMNFWSLATQ 179

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451006|ref|XP_004143253.1| PREDICTED: CASP-like protein 2-like [Cucumis sativus] gi|449524708|ref|XP_004169363.1| PREDICTED: CASP-like protein 2-like [Cucumis sativus]

 Score =  269 bits (687), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 132/179 (73%), Positives = 151/179 (84%), Gaps = 3/179 (1%)

Query: 1   MFASRPAVHPVEAPPLTEAA---GLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMA 57
           M  SRP+VHPVEAPPLTE A   G RVRMKDVQGMPGT GGL LRLLQFVFA +++ VM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 58  STSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITST 117
           +TSDF   TAF YLV A+GLQ LWS SL V+D YA+LVRRSLRN  ++ LFT+GD +TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 118 LTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           LT++AACSSAGITVLI NDLN+CG+NHC +FE+ATAMAFISWFA SPSFLLNFWSLAS 
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449046|ref|XP_002273970.1| PREDICTED: CASP-like protein At2g28370 [Vitis vinifera]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/178 (74%), Positives = 151/178 (84%), Gaps = 2/178 (1%)

Query: 1   MFASRPAVHPVEAPPLTEAAG--LRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMAS 58
           M  S PAVHP+EAPPLT+AA    R RMKD+QGMPGT GGLVLR  QF FAA+++ VMA+
Sbjct: 1   MNVSHPAVHPIEAPPLTDAANGAPRARMKDIQGMPGTLGGLVLRFFQFAFAAVSLCVMAT 60

Query: 59  TSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTL 118
           TSDF   TAFCYLV A+ LQSLWSLSL ++DIYA+LVRR LRN +++ LFTVGDGITSTL
Sbjct: 61  TSDFPSVTAFCYLVAAVSLQSLWSLSLAIVDIYALLVRRCLRNSRIVSLFTVGDGITSTL 120

Query: 119 TYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           T+AAAC+SAGITVLI NDL+ C +NHCTRFETATAMAF+SWFA SPSFLLNFWSLAS 
Sbjct: 121 TFAAACASAGITVLIGNDLDNCAVNHCTRFETATAMAFLSWFAVSPSFLLNFWSLASK 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827225|ref|XP_002881495.1| hypothetical protein ARALYDRAFT_902856 [Arabidopsis lyrata subsp. lyrata] gi|297327334|gb|EFH57754.1| hypothetical protein ARALYDRAFT_902856 [Arabidopsis lyrata subsp. lyrata]

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 126/180 (70%), Positives = 147/180 (81%), Gaps = 5/180 (2%)

Query: 1   MFASRPAVHPVEAPPLTEAAGL----RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVM 56
           M  SRP +HPV+A P+    G      VRMKDVQGMPGT GGL+LRL QFV A I+VSVM
Sbjct: 2   MNVSRPVIHPVDALPVAPTTGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 57  ASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITS 116
            +TSDF  ATAFC LVLA+ LQS+WSLSL ++D YA+LVRRSLRN  V++ FT+GDG+TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSMWSLSLFLVDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 117 TLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           TLT+AAA +SAGITVLI NDL +C +NHCTRFETATAMAFISWFA SPSF+LNFWSLA+H
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH 180

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724133|ref|NP_001237047.1| uncharacterized protein LOC100527764 [Glycine max] gi|255633140|gb|ACU16925.1| unknown [Glycine max]

 Score =  251 bits (642), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 124/182 (68%), Positives = 141/182 (77%), Gaps = 6/182 (3%)

Query: 1   MFASRPAVHPVEAPPLTEAAG------LRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVS 54
           M  S  +VHPVE  P TE  G       RVRMKDVQGMPGT GGL LR+ QFVFAA A+S
Sbjct: 1   MNVSHASVHPVEEAPTTEGGGDQNVNAPRVRMKDVQGMPGTAGGLSLRVSQFVFAAAALS 60

Query: 55  VMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGI 114
           +MASTSDF   TAFCYLV A GLQ+LWS SL + D+YA+LVRRSL+N +++ LFTVGDG+
Sbjct: 61  IMASTSDFPSVTAFCYLVAAAGLQALWSFSLAITDVYALLVRRSLQNYRIVSLFTVGDGV 120

Query: 115 TSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLA 174
           TSTLT+AAAC+SAGITVLI NDL  C  NHC +FETAT MAF+ WF T PSFLLNFWSLA
Sbjct: 121 TSTLTFAAACASAGITVLIDNDLGSCSQNHCVQFETATGMAFLCWFTTLPSFLLNFWSLA 180

Query: 175 SH 176
           S 
Sbjct: 181 SR 182

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439988|ref|XP_002281405.1| PREDICTED: CASP-like protein At2g28370 [Vitis vinifera]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/178 (73%), Positives = 149/178 (83%), Gaps = 2/178 (1%)

Query: 1   MFASRPAVHPVEAPPLTEAAG--LRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMAS 58
           MF SRP VHPVEAPPL E      RVRMKDVQGM GTPGGLVLRL QF+ A +++ VM +
Sbjct: 1   MFVSRPVVHPVEAPPLREGGNNAPRVRMKDVQGMAGTPGGLVLRLFQFLSAVVSLCVMVT 60

Query: 59  TSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTL 118
            SDF+  TAFCYLV+A+ LQSLWSLSL ++DIYA+LVRRSLRN  +I +FTVGDGITSTL
Sbjct: 61  ISDFYSVTAFCYLVVAVSLQSLWSLSLAIMDIYALLVRRSLRNSGIISVFTVGDGITSTL 120

Query: 119 TYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           T++AAC+SAGITVLI ND++RC +N CTRFETATAMAFISWFA SPSF LNFWSLAS 
Sbjct: 121 TFSAACASAGITVLIENDMDRCAMNPCTRFETATAMAFISWFAVSPSFFLNFWSLASR 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77999281|gb|ABB16987.1| unknown [Solanum tuberosum]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/173 (69%), Positives = 140/173 (80%), Gaps = 1/173 (0%)

Query: 4   SRPAVHPVEAPPLTEAAGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFH 63
           S PAVHPVEAPP+T AA + VRMKD QGMPGT G L LRL QFVFA I++ VM +TSDF 
Sbjct: 3   SGPAVHPVEAPPMTMAAPM-VRMKDFQGMPGTLGSLFLRLCQFVFAVISICVMVTTSDFP 61

Query: 64  EATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAA 123
             TAF YLV A+GLQ +WSL L + D+YAILV+RS RN  ++ LF +GDGITSTLT+AAA
Sbjct: 62  SVTAFSYLVAAVGLQIIWSLVLAIADVYAILVKRSYRNVAIVSLFAIGDGITSTLTFAAA 121

Query: 124 CSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           C+SAGITVLISNDL +C +NHC RF +ATAMAF+SWFA SPSF LNFWSLAS 
Sbjct: 122 CASAGITVLISNDLEKCKVNHCARFMSATAMAFLSWFAASPSFFLNFWSLASR 174

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724825|ref|NP_001236559.1| uncharacterized protein LOC100526963 [Glycine max] gi|255631260|gb|ACU15997.1| unknown [Glycine max]

 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 120/183 (65%), Positives = 141/183 (77%), Gaps = 7/183 (3%)

Query: 1   MFASRPAVHPVEAPPLTEAAGL-------RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAV 53
           M  S  +VHPVE  P TE  G        RVRMKD+QGMPGT GGL LR+ +FVFAA A+
Sbjct: 1   MNVSHASVHPVEEAPTTEGGGADQNVNAPRVRMKDIQGMPGTAGGLSLRVSRFVFAAAAL 60

Query: 54  SVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDG 113
           S+MASTSDF   TAFCYLV A GLQ++WS SL + D+YA+LVRRSL+N +++ LFT+GDG
Sbjct: 61  SIMASTSDFLSVTAFCYLVAAAGLQAMWSFSLAITDVYALLVRRSLQNYRIVSLFTIGDG 120

Query: 114 ITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSL 173
           +TSTLT+AAAC+SAGIT+LI NDL  C  NHC +FETAT MAFI WF T PSFLLNFWSL
Sbjct: 121 VTSTLTFAAACASAGITILIDNDLGNCSQNHCVQFETATGMAFICWFTTVPSFLLNFWSL 180

Query: 174 ASH 176
           AS 
Sbjct: 181 ASR 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509100|gb|AFK42616.1| unknown [Lotus japonicus]

 Score =  248 bits (634), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 123/183 (67%), Positives = 142/183 (77%), Gaps = 7/183 (3%)

Query: 1   MFASRPAVHPVEAPPLTEAAGL-------RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAV 53
           M  S  +VHPV+A P TEA G        RVRMKD+QGMPGT GGL LR+ QFVFAA A+
Sbjct: 1   MNVSHASVHPVDAVPTTEAGGADQNANVPRVRMKDIQGMPGTVGGLALRVSQFVFAAAAL 60

Query: 54  SVMASTSDFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDG 113
           S+MAST+DF   TAFCYLV A GLQ+LWS  L ++D+YAILVRRSL+N +V+ LFT+GDG
Sbjct: 61  SIMASTNDFPSVTAFCYLVAAAGLQALWSFILAIVDVYAILVRRSLQNYRVLGLFTIGDG 120

Query: 114 ITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSL 173
           +TSTL +AAAC+SAGITVLI NDL  C  NHC +FETAT MAFI WF T PSFLLNFWSL
Sbjct: 121 VTSTLVFAAACASAGITVLIDNDLGSCAKNHCVQFETATGMAFICWFTTLPSFLLNFWSL 180

Query: 174 ASH 176
           AS 
Sbjct: 181 ASR 183

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140189|ref|XP_002323467.1| predicted protein [Populus trichocarpa] gi|222868097|gb|EEF05228.1| predicted protein [Populus trichocarpa]

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 122/176 (69%), Positives = 142/176 (80%), Gaps = 3/176 (1%)

Query: 4   SRPAVHPVEAPPLTEA---AGLRVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTS 60
           SRP VHPVEAPPLT+    A +RVRMKDVQGMPGT G L LRL QFVF  +++ VMA+TS
Sbjct: 5   SRPTVHPVEAPPLTDGPQNALIRVRMKDVQGMPGTRGSLSLRLTQFVFGLVSICVMATTS 64

Query: 61  DFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTY 120
           DF   TAF YLV A+ +Q LWSLS+ ++DIYA+LVRRSLR   + RLFT+GDGI STLT+
Sbjct: 65  DFRSVTAFRYLVGAVCVQILWSLSMAIVDIYALLVRRSLRKQIIFRLFTIGDGIISTLTF 124

Query: 121 AAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
           AAAC+SAGITVLI NDL++C  NHC RF+TATAMA+IS FA  PSFLLNFWSLAS 
Sbjct: 125 AAACASAGITVLIDNDLDKCSENHCARFQTATAMAYISCFAMMPSFLLNFWSLASQ 180

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
TAIR|locus:2061743	180	AT2G37200 "AT2G37200" [Arabido	0.994	0.972	0.65	1.1e-55
TAIR|locus:2057497	179	AT2G28370 "AT2G28370" [Arabido	0.994	0.977	0.595	4e-51
TAIR|locus:2086258	152	AT3G23200 "AT3G23200" [Arabido	0.852	0.986	0.397	2e-24
TAIR|locus:2084445	154	AT3G53850 "AT3G53850" [Arabido	0.852	0.974	0.385	2.6e-24
TAIR|locus:2185103	152	AT5G02060 "AT5G02060" [Arabido	0.840	0.973	0.397	1.8e-23
TAIR|locus:504956317	152	AT1G49405 "AT1G49405" [Arabido	0.852	0.986	0.293	5.3e-17
TAIR|locus:2077962	154	AT3G50810 "AT3G50810" [Arabido	0.852	0.974	0.311	8.6e-17
TAIR|locus:1006230287	152	AT4G37235 "AT4G37235" [Arabido	0.789	0.914	0.310	9.1e-13

TAIR|locus:2061743 AT2G37200 "AT2G37200" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 117/180 (65%), Positives = 134/180 (74%)

Query:     1 MFASRPAVHPVEAPPLTEAAGL--R--VRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVM 56
             M  SRPA+HPV+A P+   AG   R  VRMKDVQGMPGT GGL+LRL QFV A I+VSVM
Sbjct:     2 MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query:    57 ASTSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITS 116
              +TSDF  ATAFC                   D YA+LVRRSLRN  V++ FT+GDG+TS
Sbjct:    62 VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query:   117 TLTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 176
             TLT+AAA +SAGITVLI NDL +C +NHCTRFETATAMAFISWFA SPSF+LNFWSLA+H
Sbjct:   122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH 180

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2057497 AT2G28370 "AT2G28370" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 106/178 (59%), Positives = 125/178 (70%)

Query:     1 MFASRPAVHPVEAPPL--TEAAGL-RVRMKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMA 57
             M  S  +VHPVE PP   TE     RVRM D++GMPGT  GL LR  QF+FAA A+ VMA
Sbjct:     1 MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query:    58 STSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIYAILVRRSLRNDKVIRLFTVGDGITST 117
             STSDF   TAFCY                  D+YAI+V+RSL+N +++ LF +GDG+TST
Sbjct:    61 STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query:   118 LTYAAACSSAGITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 175
             LT+AAAC+SAGITVLI NDLN C  NHC +FET+TA+AFISWFA  PSFL NFWSLAS
Sbjct:   121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2086258 AT3G23200 "AT3G23200" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 60/151 (39%), Positives = 84/151 (55%)

Query:    26 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXX 85
             M D+ G PGT  GLVLR+ Q VFAA ++S M ++  F   TAFCY               
Sbjct:     1 MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query:    86 XXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGIN-H 144
                D +A++ +++L +  ++ LF VGD +TSTL+ A A SSAGITVL   DL  C     
Sbjct:    61 AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query:   145 CTRFETATAMAFISWFATSPSFLLNFWSLAS 175
             C +++ + A+AF+ W   + S L   W LAS
Sbjct:   121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2084445 AT3G53850 "AT3G53850" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 59/153 (38%), Positives = 84/153 (54%)

Query:    26 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXX 85
             MK + G PGT  GL+LR+ Q   AA ++ VM S  +F   TAFCY               
Sbjct:     1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query:    86 XXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINH- 144
                D+YA+  ++ L+N  ++ LF VGD +T+ L+ AAACSSAG+ VL   D+  C     
Sbjct:    61 ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query:   145 --CTRFETATAMAFISWFATSPSFLLNFWSLAS 175
               C R+E A A++F++W   + S  + FW LAS
Sbjct:   121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185103 AT5G02060 "AT5G02060" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 60/151 (39%), Positives = 81/151 (53%)

Query:    26 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXX 85
             MK + G PGT  GL+LRL Q   AA ++ VM S+ DF   TAFC+               
Sbjct:     1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query:    86 XXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGIN-- 143
                D+YAI  +  LR+  ++ LFTVGD +T+ L  AAACSSAG+TVL + D   C     
Sbjct:    61 ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query:   144 -HCTRFETATAMAFISWFATSPSFLLNFWSL 173
               C RF+ +  ++F +WF  + S    FW L
Sbjct:   121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:504956317 AT1G49405 "AT1G49405" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 44/150 (29%), Positives = 75/150 (50%)

Query:    26 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXX 85
             M +V G  GT   L LRL Q V A  ++  M     F++ TAFCY               
Sbjct:     1 MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query:    86 XXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHC 145
                DIY +++++  +  +++   ++GD + S L  A+A S+A +  ++ ++ + C    C
Sbjct:    61 AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCPPTIC 120

Query:   146 TRFETATAMAFISWFATSPSFLLNFWSLAS 175
              R++ A  +AF++WF +  S L N W L S
Sbjct:   121 NRYQFAATLAFLTWFLSLSSSLFNLWLLPS 150

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077962 AT3G50810 "AT3G50810" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 47/151 (31%), Positives = 74/151 (49%)

Query:    26 MKDVQGMPGTPGGLVLRLLQFVFAAIAVSVMASTSDFHEATAFCYXXXXXXXXXXXXXXX 85
             M+ V G  GT     LR  Q +F+A ++  M    DF++ T FCY               
Sbjct:     1 MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query:    86 XXXDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISN-DLNRCGINH 144
                D Y++LV+   +  +V+ +   GD + S L+   AC+ A  T L+++ D   C  + 
Sbjct:    61 ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query:   145 CTRFETATAMAFISWFATSPSFLLNFWSLAS 175
             C +++ + A+AF+ WF    S L NFWSL S
Sbjct:   121 CIQYQVSAALAFLCWFLLLASALFNFWSLPS 151

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:1006230287 AT4G37235 "AT4G37235" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 46/148 (31%), Positives = 68/148 (45%)

Query:    34 GTPGGLVLRLLQFVFAAIAVSVMA--STSDFHEATAFCYXXXXXXXXXXXXXXXXXXDIY 91
             GT    VLRL Q +F++ ++  M      DF+  T FCY                  + Y
Sbjct:     9 GTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALMEAY 68

Query:    92 AILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDLNRCGINHCTRFETA 151
             +ILV++      VI +   GD + S L+   ACS+A + VL+ +     G   C R++ +
Sbjct:    69 SILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMD----AGEKQCDRYKLS 124

Query:   152 TAMAFISWFATSPSFLLNFW---SLASH 176
               MAF+S F +  S   NF    SL SH
Sbjct:   125 ATMAFLSSFLSFASTFFNFCLLPSLMSH 152


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       158   0.00085  106 3  11 22  0.40    31
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  136 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.71u 0.18s 11.89t   Elapsed:  00:00:00
  Total cpu time:  11.71u 0.18s 11.89t   Elapsed:  00:00:00
  Start:  Sat May 11 03:19:33 2013   End:  Sat May 11 03:19:33 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B4FNS3	CSPLK_MAIZE	No assigned EC number	0.6105	1.0	0.9263	N/A	no
A9RKK4	CSPLF_PHYPA	No assigned EC number	0.5664	0.9772	0.9608	N/A	no
D5ACW4	CSPLB_PICSI	No assigned EC number	0.5065	0.8579	0.8296	N/A	no
P0DI64	CSPL1_PINCO	No assigned EC number	0.5459	0.9886	0.9405	N/A	no
P0DI70	CSPL2_GINBI	No assigned EC number	0.68	0.9943	0.9943	N/A	no
P0DI71	CSPL3_GINBI	No assigned EC number	0.5307	0.9943	0.9831	N/A	no
A9NYX5	CSPLA_PICSI	No assigned EC number	0.5567	0.9886	0.9405	N/A	no
Q10Q78	CSPLV_ORYSJ	No assigned EC number	0.6610	0.9943	0.9831	yes	no
Q6NPF8	CSPL9_ARATH	No assigned EC number	0.7166	0.9943	0.9722	yes	no
P0DI27	CSPL6_PTEAA	No assigned EC number	0.6171	0.9943	0.9722	N/A	no
P0DI69	CSPL1_GINBI	No assigned EC number	0.6145	0.9886	0.9830	N/A	no
P0DI68	CSPL1_BRADI	No assigned EC number	0.6629	1.0	0.9887	yes	no
P0DI65	CSPLL_MAIZE	No assigned EC number	0.56	0.8522	0.9803	N/A	no
A9RLK6	CSPLG_PHYPA	No assigned EC number	0.5593	0.9829	0.9505	N/A	no
P0DI67	CSPLO_MAIZE	No assigned EC number	0.5363	0.9886	0.9613	N/A	no
P0DI66	CSPLM_MAIZE	No assigned EC number	0.5474	0.9886	0.9613	N/A	no
D8QNI1	CSPLH_SELML	No assigned EC number	0.5771	0.9943	0.9943	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018187001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (178 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	176
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	7e-20

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 80.8 bits (200), Expect = 7e-20
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 31  GMPGTPGGLVLRLLQFVFAAIAVSVMASTSD------------FHEATAFCYLVLALGLQ 78
           G P     LVLRL  FV A  A  VM +               F +  AF YLV+A  + 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 79  SLWSLSLLVLDIYAILVRRSLRNDKVIRLFTVGDGITSTLTYAAACSSAGITVLI----- 133
           + +SL  LVL +Y +  R+  R   +  L  + D + + L  AAA ++A I  L      
Sbjct: 61  AGYSLLQLVLSVYLL-SRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 134 -SNDLNRCGINH--CTRFETATAMAFISWFA 161
            +N +  C      C R   + A++F+++  
Sbjct: 120 HANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	176
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	99.95
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	99.84
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.84

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=99.95  E-value=1.4e-27  Score=188.08  Aligned_cols=128  Identities=31%  Similarity=0.481  Sum_probs=119.2

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcCCC------------CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 030494           33 PGTPGGLVLRLLQFVFAAIAVSVMASTSD------------FHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLR  100 (176)
Q Consensus        33 pGt~~gL~LR~~q~~fa~~Sl~vM~s~~~------------F~s~taF~YLva~~~Lq~lWS~~la~~d~yall~k~~l~  100 (176)
                      +++..+++||++|++++++|+++|++|+|            |+++++|+|+|++|++++.||+.|++.++|.+.+|+ .+
T Consensus         2 ~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~-~~   80 (149)
T PF04535_consen    2 SLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK-LR   80 (149)
T ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-Cc
Confidence            56778999999999999999999999988            999999999999999999999999999999999998 77


Q ss_pred             CcceEEEEEEchhhHHHHhhhhhccchhhHHhhhccc------CCCCcCc--CcHHHHHHHHHHHHHHH
Q 030494          101 NDKVIRLFTVGDGITSTLTYAAACSSAGITVLISNDL------NRCGINH--CTRFETATAMAFISWFA  161 (176)
Q Consensus       101 ~~~~~~lf~vGD~V~a~L~~aAAsAsagitvL~~~d~------~~C~~~~--C~~~~~SiamAFlsw~~  161 (176)
                      ++...++++++||+++||+++|++|+++++.+.++|.      +.|....  |+|+++|++++|++|++
T Consensus        81 ~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   81 SKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            7778888899999999999999999999999988884      3699775  99999999999999974

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=99.84  E-value=3.7e-21  Score=154.26  Aligned_cols=131  Identities=24%  Similarity=0.354  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCC--------------CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcce
Q 030494           39 LVLRLLQFVFAAIAVSVMASTSD--------------FHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKV  104 (176)
Q Consensus        39 L~LR~~q~~fa~~Sl~vM~s~~~--------------F~s~taF~YLva~~~Lq~lWS~~la~~d~yall~k~~l~~~~~  104 (176)
                      +.||+..+.++++|.++|++|+|              |+++.+|+|+|.++++.+.||+.++...+|.+.+++...   .
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~---~   77 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFF---K   77 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh---H
Confidence            57999999999999999999844              889999999999999999999999999999988777652   2


Q ss_pred             EEEEEEchhhHHHHhhhhhccchhhHHhhhcccC------CCCcC--cCcHHHHHHHHHHHHHHHHHhHHHHHHhh
Q 030494          105 IRLFTVGDGITSTLTYAAACSSAGITVLISNDLN------RCGIN--HCTRFETATAMAFISWFATSPSFLLNFWS  172 (176)
Q Consensus       105 ~~lf~vGD~V~a~L~~aAAsAsagitvL~~~d~~------~C~~~--~C~~~~~SiamAFlsw~~~a~S~l~~~w~  172 (176)
                      .++.++|||+++||+++|++|+++++++.++|.+      .|...  +|+|...|++++|+++++++++++++-..
T Consensus        78 ~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~  153 (154)
T TIGR01569        78 LIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAIS  153 (154)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4557999999999999999999999999988854      48764  39999999999999999999999998543

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.84  E-value=3.9e-08  Score=74.24  Aligned_cols=129  Identities=24%  Similarity=0.285  Sum_probs=95.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHhcCC------CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcceEEEEEE
Q 030494           37 GGLVLRLLQFVFAAIAVSVMASTS------DFHEATAFCYLVLALGLQSLWSLSLLVLDIYAILVRRSLRNDKVIRLFTV  110 (176)
Q Consensus        37 ~gL~LR~~q~~fa~~Sl~vM~s~~------~F~s~taF~YLva~~~Lq~lWS~~la~~d~yall~k~~l~~~~~~~lf~v  110 (176)
                      -...+|+.|++++++.+..++...      ..+..++.-|.+++.++..++++...+.+.+.  .|+ ..+.......++
T Consensus         5 ~~~ilR~lq~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~-~~~~~~~~~~~~   81 (144)
T PF01284_consen    5 PSGILRILQLVFALIIFGLVASSIATGSQIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS--LKY-RPRIPWPLVEFI   81 (144)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH--Hhc-ccccccchhHHH
Confidence            457899999999999999998775      35667788999999999999999999999988  222 222222222467


Q ss_pred             chhhHHHHhhhhhccchhhHHhhhc-----ccCCCCcCcCcHHHHHHHHHHHHHHHHHhHHHH
Q 030494          111 GDGITSTLTYAAACSSAGITVLISN-----DLNRCGINHCTRFETATAMAFISWFATSPSFLL  168 (176)
Q Consensus       111 GD~V~a~L~~aAAsAsagitvL~~~-----d~~~C~~~~C~~~~~SiamAFlsw~~~a~S~l~  168 (176)
                      .|.+.+.+-+++++..+--..-.+.     +...+....|+..+++++++|++|++-..|..+
T Consensus        82 ~~~v~~il~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~l  144 (144)
T PF01284_consen   82 FDAVFAILWLAAFIALAAYLSDHSCSNTGNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAVL  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHC
Confidence            7999999999988877644332111     112222334999999999999999999888753

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	176
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 38/216 (17%), Positives = 57/216 (26%), Gaps = 75/216 (34%)

Query: 1   MFASRPAVHPVEAPPLTEAAGLRVRMKD---VQGMPGT-------------------PGG 38
              SR    P     L +A  L +R      + G+ G+                      
Sbjct: 129 YNVSRL--QPYLK--LRQAL-LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 39  -------------LVLRLLQFVFAAIAVSVMASTSDFHEATAFCYLVLALGLQSLWSL-- 83
                         VL +LQ +   I      S SD           +   L+ L     
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQI-DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 84  ---SLLVLDIYAILVRRSLRNDKVIRLFTVG--------D-GITSTLTYAAACSSAGITV 131
               LLVL         +++N K    F +            +T  L       SA  T 
Sbjct: 243 YENCLLVLL--------NVQNAKAWNAFNLSCKILLTTRFKQVTDFL-------SAATTT 287

Query: 132 LISNDLNRCGINHCTRFETATAMAFISWFATSPSFL 167
            IS D +   +   T  E  +    + +    P  L
Sbjct: 288 HISLDHHSMTL---TPDEVKS--LLLKYLDCRPQDL 318

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00