Citrus Sinensis ID: 030501

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
MEGLQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV
cccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccHHHHHccccEEEccEEEEEEccccccEEEEcHHHcccccccccccEEEcccccEEEEcccccEEEEcccccccccccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccccHHHHHcccEEEEccEEEEEEccccccEEEEcHHHHHHccccccccEcccccccEEEEcccccEEEEEccccccccccEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcc
meglqknnQWLIIVVMVTMSVLCvhtesrspvlhrvgggkytwkpnvnftqwaehqhfyvgdwlyfgfdkhkynvlqvnktnyekcgdkdfienvtrggrdvfnlteakpfyficgrgdycskgMKIAVHvetdpppptaspnltisaspspssihgHLLLACTIAFLSIFCSVSV
meglqknnqWLIIVVMVTMSVLCVHTesrspvlhrvgggkyTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKtnyekcgdkDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV
MEGLQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV
*******NQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHV***********************IHGHLLLACTIAFLSIFCSV**
*************VVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAV********************************ACTIAFLSIFCSVSV
MEGLQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV
MEGLQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETD**********************GHLLLACTIAFLSIFCSVSV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEGLQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query176 2.2.26 [Sep-21-2011]
Q39131172 Lamin-like protein OS=Ara no no 0.903 0.924 0.385 2e-27
Q9T076 349 Early nodulin-like protei no no 0.721 0.363 0.333 4e-14
Q9SK27182 Early nodulin-like protei no no 0.676 0.653 0.351 1e-11
Q5JNJ5237 Early nodulin-like protei no no 0.835 0.620 0.269 6e-11
Q8LC95186 Early nodulin-like protei no no 0.539 0.510 0.35 1e-09
Q02917187 Early nodulin-55-2 OS=Gly no no 0.647 0.609 0.325 3e-09
P80728108 Mavicyanin OS=Cucurbita p N/A no 0.562 0.916 0.320 3e-08
Q07488196 Blue copper protein OS=Ar no no 0.585 0.525 0.320 2e-07
P00302107 Stellacyanin OS=Toxicoden N/A no 0.494 0.813 0.326 3e-07
Q8LG89129 Basic blue protein OS=Ara no no 0.630 0.860 0.305 5e-07
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1 Back     alignment and function desciption
 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 100/166 (60%), Gaps = 7/166 (4%)

Query: 15  VMVTMSVLCVHTESRSPVL----HRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDK 70
           V++T  VL     +  P +    + VG  K+ W PN+N+T WA+ +HFY+GDWLYF FD+
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDR 64

Query: 71  HKYNVLQVNKTNYEKCGDKDFIENVTRG-GRDVFNLTEAKPFYFICGRGDYCSKGMKIAV 129
           +++N+L+VNKT+YE C     I N TRG GRD+  L + K +Y + G+G  C  GMK++V
Sbjct: 65  NQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGG-CYGGMKLSV 123

Query: 130 HVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVS 175
            VE  PPPP ++P   I +    + +   ++     AF +++  +S
Sbjct: 124 KVEKLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPAMWDVIS 169

Arabidopsis thaliana (taxid: 3702)
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1 Back     alignment and function description
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2 Back     alignment and function description
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2 Back     alignment and function description
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1 Back     alignment and function description
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1 Back     alignment and function description
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2 Back     alignment and function description
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1 Back     alignment and function description
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
224059240167 predicted protein [Populus trichocarpa] 0.909 0.958 0.572 2e-48
356577422163 PREDICTED: lamin-like protein-like [Glyc 0.846 0.914 0.554 3e-44
357467371167 Lamin-like protein [Medicago truncatula] 0.738 0.778 0.621 8e-44
42570931163 early nodulin-like protein 20 [Arabidops 0.875 0.944 0.527 6e-43
449530917188 PREDICTED: lamin-like protein-like, part 0.607 0.569 0.694 1e-39
297822307145 hypothetical protein ARALYDRAFT_481583 [ 0.761 0.924 0.565 4e-38
255573677179 Early nodulin 55-2 precursor, putative [ 0.875 0.860 0.473 3e-33
359488953164 PREDICTED: lamin-like protein [Vitis vin 0.755 0.810 0.503 7e-33
296082965176 unnamed protein product [Vitis vinifera] 0.755 0.755 0.503 7e-33
449437805184 PREDICTED: lamin-like protein-like [Cucu 0.886 0.847 0.467 1e-31
>gi|224059240|ref|XP_002299784.1| predicted protein [Populus trichocarpa] gi|222847042|gb|EEE84589.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 13/173 (7%)

Query: 4   LQKNNQWLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDW 63
           L+K   WLI VV    ++L    E R PVLHRVGGGKYTW PN+NFT WA H+ FYVGDW
Sbjct: 6   LKKMLLWLITVV----NILGSTAECREPVLHRVGGGKYTWAPNMNFTAWAMHEEFYVGDW 61

Query: 64  LYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSK 123
           LYFGFDK +Y+VL+VNK NY  C DK+ I N+TRGGRDVFNLTEA+P+YF+ GRG YC K
Sbjct: 62  LYFGFDKTRYSVLEVNKINYNNCNDKNCIANITRGGRDVFNLTEARPYYFLSGRG-YCFK 120

Query: 124 GMKIAVHVETDPPPPTASPNLTISASPSPSSIHGHLLLACTIAFLSIFCSVSV 176
           GMK+AVH +   PPP  +P +  +  PS S+ HG  +L      L++F S +V
Sbjct: 121 GMKVAVHAQY--PPPDPAPLVVRNVCPSKSASHGLAML------LALFTSYAV 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356577422|ref|XP_003556825.1| PREDICTED: lamin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|357467371|ref|XP_003603970.1| Lamin-like protein [Medicago truncatula] gi|355493018|gb|AES74221.1| Lamin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|42570931|ref|NP_973539.1| early nodulin-like protein 20 [Arabidopsis thaliana] gi|330252833|gb|AEC07927.1| early nodulin-like protein 20 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449530917|ref|XP_004172438.1| PREDICTED: lamin-like protein-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|297822307|ref|XP_002879036.1| hypothetical protein ARALYDRAFT_481583 [Arabidopsis lyrata subsp. lyrata] gi|297324875|gb|EFH55295.1| hypothetical protein ARALYDRAFT_481583 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255573677|ref|XP_002527760.1| Early nodulin 55-2 precursor, putative [Ricinus communis] gi|223532847|gb|EEF34621.1| Early nodulin 55-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359488953|ref|XP_002278873.2| PREDICTED: lamin-like protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082965|emb|CBI22266.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449437805|ref|XP_004136681.1| PREDICTED: lamin-like protein-like [Cucumis sativus] gi|449494702|ref|XP_004159623.1| PREDICTED: lamin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
TAIR|locus:1006230143163 ENODL20 "early nodulin-like pr 0.875 0.944 0.527 1.7e-43
TAIR|locus:2102157167 ENODL16 "early nodulin-like pr 0.738 0.778 0.440 8.2e-28
TAIR|locus:2150951172 ENODL17 "early nodulin-like pr 0.903 0.924 0.385 1.7e-27
TAIR|locus:2135798141 ENODL19 "early nodulin-like pr 0.590 0.737 0.528 4.5e-27
TAIR|locus:2137672 349 ENODL2 "early nodulin-like pro 0.857 0.432 0.331 2.3e-16
TAIR|locus:2154679 370 ENODL1 "early nodulin-like pro 0.670 0.318 0.365 8.4e-15
TAIR|locus:2086518174 AT3G27200 [Arabidopsis thalian 0.840 0.850 0.324 1.1e-14
TAIR|locus:4010713753106 AT3G17675 [Arabidopsis thalian 0.545 0.905 0.357 2.3e-14
TAIR|locus:2116767177 ENODL15 "early nodulin-like pr 0.778 0.774 0.331 3.8e-14
TAIR|locus:2061406226 ENODL11 "early nodulin-like pr 0.534 0.415 0.343 1.4e-13
TAIR|locus:1006230143 ENODL20 "early nodulin-like protein 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 85/161 (52%), Positives = 113/161 (70%)

Query:    10 WLIIVVMVTMSVLCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFD 69
             W ++ V V + ++ V  ES    LHRVGGG+YTW  +VNF+ WA HQ FY GDWLYFGF+
Sbjct:     7 WALVYVTVMILIIVVEVESS---LHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFN 63

Query:    70 KHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAV 129
             + ++N+LQVNK++YE+C D D+I N+TRGGRDVF L E KP+YFICGRG YC KGMK+A+
Sbjct:    64 RTRHNILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRG-YCLKGMKLAI 122

Query:   130 HVETDPPPPTASPNLTISASP--SPSSIHGHLLLACTIAFL 168
              V    PPP+A  N T + +P   P++I   +L+    A L
Sbjct:   123 TV-LPQPPPSAPTNFTSTTTPLIPPNAITAAILIFAFKALL 162
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0009055 "electron carrier activity" evidence=IEA
TAIR|locus:2102157 ENODL16 "early nodulin-like protein 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150951 ENODL17 "early nodulin-like protein 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135798 ENODL19 "early nodulin-like protein 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137672 ENODL2 "early nodulin-like protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154679 ENODL1 "early nodulin-like protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086518 AT3G27200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713753 AT3G17675 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116767 ENODL15 "early nodulin-like protein 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061406 ENODL11 "early nodulin-like protein 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00011457
hypothetical protein (167 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
PLN03148167 PLN03148, PLN03148, Blue copper-like protein; Prov 2e-28
pfam0229884 pfam02298, Cu_bind_like, Plastocyanin-like domain 6e-24
>gnl|CDD|178693 PLN03148, PLN03148, Blue copper-like protein; Provisional Back     alignment and domain information 
 Score =  103 bits (257), Expect = 2e-28
 Identities = 59/141 (41%), Positives = 79/141 (56%), Gaps = 7/141 (4%)

Query: 34  HRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIE 93
           H VG  K  W P +N+T WA +Q FYVGD + F + K +YNV +VN+T Y+ C  +    
Sbjct: 23  HIVGANK-GWNPGINYTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAAG 81

Query: 94  NVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETDPPPP--TASPNLTISASPS 151
           N T  G+D   L +AK +YFICG G  C  GMK+ + V   PPPP  TA+ N   S S +
Sbjct: 82  NWT-SGKDFIPLNKAKRYYFICGNG-QCFNGMKVTILVHPLPPPPSHTAAANGAKSHSAA 139

Query: 152 PSSIHGHL--LLACTIAFLSI 170
           P++ H  L  L    +   SI
Sbjct: 140 PAAFHKGLVALRGLVLWMASI 160

Length = 167
>gnl|CDD|216965 pfam02298, Cu_bind_like, Plastocyanin-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 176
PLN03148167 Blue copper-like protein; Provisional 100.0
PF0229885 Cu_bind_like: Plastocyanin-like domain; InterPro: 99.97
PRK02710119 plastocyanin; Provisional 98.7
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.51
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.41
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 98.29
COG3794128 PetE Plastocyanin [Energy production and conversio 98.15
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.93
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 97.3
TIGR0265783 amicyanin amicyanin. Members of this family are am 97.09
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.72
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 96.57
COG4454158 Uncharacterized copper-binding protein [Inorganic 95.31
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 95.24
PF00812145 Ephrin: Ephrin; InterPro: IPR001799 Ephrins are a 93.64
TIGR02376 311 Cu_nitrite_red nitrite reductase, copper-containin 91.68
PLN02604 566 oxidoreductase 91.29
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 90.38
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 89.59
KOG3858233 consensus Ephrin, ligand for Eph receptor tyrosine 89.06
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 88.13
PLN02354 552 copper ion binding / oxidoreductase 86.88
PRK02888635 nitrous-oxide reductase; Validated 86.02
PRK10378 375 inactive ferrous ion transporter periplasmic prote 85.76
MTH00047194 COX2 cytochrome c oxidase subunit II; Provisional 82.72
PLN02835 539 oxidoreductase 82.39
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 81.09
>PLN03148 Blue copper-like protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-43  Score=283.40  Aligned_cols=107  Identities=42%  Similarity=0.899  Sum_probs=97.9

Q ss_pred             CCeEEEEcCCCCCCCCCCCccccccCCceeeCCEEEEeEeCCcceEEEEcccccCcCCCCCccceeecCCceEEEecCCc
Q 030501           30 SPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAK  109 (176)
Q Consensus        30 ~a~~~~VGg~~~GW~~~~~Y~~WA~~~tF~vGD~LvF~y~~~~HsV~~V~~~~Y~~C~~~~~~~~~~~~G~~~v~L~~~G  109 (176)
                      .+++|+|||+ .||+++.||++|+++|+|++||+|+|+|++++|+|+||++++|++|+.++++..+ ++|++.|+|+++|
T Consensus        19 ~a~~~~VGd~-~GW~~~~~Y~~WA~~k~F~VGD~LvF~Y~~~~hnV~~V~~~~Y~~C~~~~pi~~~-tsG~d~v~L~~~G   96 (167)
T PLN03148         19 TATDHIVGAN-KGWNPGINYTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAAGNW-TSGKDFIPLNKAK   96 (167)
T ss_pred             cceEEEeCCC-CCcCCCCChhHhhcCCCCccCCEEEEEecCCCceEEEEChHHcCcccCCCCccee-cCCCcEEEecCCc
Confidence            4789999996 6999999999999999999999999999999999999999999999999998775 4689999999999


Q ss_pred             cEEEEcCCCCCCcCCCeEEEEeeCCCCCCC
Q 030501          110 PFYFICGRGDYCSKGMKIAVHVETDPPPPT  139 (176)
Q Consensus       110 ~~YFiC~v~~HC~~GmKl~I~V~~~~~~~~  139 (176)
                      ++||||+ .+||++||||.|+|.+.+|||+
T Consensus        97 ~~YFIcg-~ghC~~GmKl~I~V~~~~~pp~  125 (167)
T PLN03148         97 RYYFICG-NGQCFNGMKVTILVHPLPPPPS  125 (167)
T ss_pred             cEEEEcC-CCccccCCEEEEEEcCCCCCCC
Confidence            9999999 5899999999999987654443

>PF02298 Cu_bind_like: Plastocyanin-like domain; InterPro: IPR003245 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF00812 Ephrin: Ephrin; InterPro: IPR001799 Ephrins are a family of proteins [] that are ligands of class V (EPH-related) receptor protein-tyrosine kinases (see IPR001426 from INTERPRO) Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>KOG3858 consensus Ephrin, ligand for Eph receptor tyrosine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>MTH00047 COX2 cytochrome c oxidase subunit II; Provisional Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
1ws7_A109 Crystal Structure Of Mavicyanin From Cucurbita Pepo 2e-09
1jer_A138 Cucumber Stellacyanin, Cu2+, Ph 7.0 Length = 138 2e-07
1x9r_A116 Umecyanin From Horse Raddish- Crystal Structure Of 6e-07
2cbp_A96 Cucumber Basic Protein, A Blue Copper Protein Lengt 1e-06
1f56_A91 Spinach Plantacyanin Length = 91 4e-06
>pdb|1WS7|A Chain A, Crystal Structure Of Mavicyanin From Cucurbita Pepo Medullosa (Zucchini) Length = 109 Back     alignment and structure 
Iteration: 1

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 32  VLHRVGG--GKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDK 89
            +H+VG   G  T  P  ++ +WA    F+VGD L F ++   +NVLQV++  ++ C   
Sbjct: 3   TVHKVGDSTGWTTLVP-YDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 61
Query: 90  DFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVE 132
               + T G  D   L     FYF+CG   +C  G K+ + V+
Sbjct: 62  SPAASYTSGA-DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 103
>pdb|1JER|A Chain A, Cucumber Stellacyanin, Cu2+, Ph 7.0 Length = 138 Back     alignment and structure
>pdb|1X9R|A Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form Length = 116 Back     alignment and structure
>pdb|2CBP|A Chain A, Cucumber Basic Protein, A Blue Copper Protein Length = 96 Back     alignment and structure
>pdb|1F56|A Chain A, Spinach Plantacyanin Length = 91 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
1jer_A138 Cucumber stellacyanin; electron transport, copper, 4e-33
1x9u_A116 Umecyanin; cupredoxin, phytocyanin, copper binding 2e-32
1ws8_A109 Mavicyanin; oxidized form, phytocyanin, cupredoxin 4e-32
1f56_A91 Plantacyanin; cupredoxin, copper protein, beta bar 5e-29
2cbp_A96 Cucumber basic protein; electron transport, phytoc 1e-27
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1 Length = 138 Back     alignment and structure
 Score =  113 bits (285), Expect = 4e-33
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 15/134 (11%)

Query: 34  HRVGGGKYTWKPNVN---FTQWAEHQHFYVGDWLYFGFDKHKYNVLQV-NKTNYEKCGDK 89
           H VG     W    +   ++QWA  + F VGD L F F  + +NV ++  K +++ C   
Sbjct: 6   HIVGDNT-GWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFV 64

Query: 90  DFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVETD----------PPPPT 139
           +   +V R    +  L E    YF+C  G +CS G K++++V               PP+
Sbjct: 65  NSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSPPS 124

Query: 140 ASPNLTISASPSPS 153
           +     +   PSPS
Sbjct: 125 SVMPPPVMPPPSPS 138
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A Length = 116 Back     alignment and structure
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A Length = 109 Back     alignment and structure
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1 Length = 91 Back     alignment and structure
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1 Length = 96 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
1jer_A138 Cucumber stellacyanin; electron transport, copper, 100.0
1ws8_A109 Mavicyanin; oxidized form, phytocyanin, cupredoxin 100.0
1x9u_A116 Umecyanin; cupredoxin, phytocyanin, copper binding 100.0
2cbp_A96 Cucumber basic protein; electron transport, phytoc 100.0
1f56_A91 Plantacyanin; cupredoxin, copper protein, beta bar 100.0
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 99.32
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 99.22
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.1
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.97
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.93
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.92
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.9
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.9
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.87
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.85
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.85
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.79
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.78
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.78
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.77
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.76
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.66
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.49
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.21
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 98.15
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.02
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.01
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 98.01
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.91
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.87
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 97.62
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 97.6
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 97.51
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 97.2
1iko_P178 Ephrin-B2; greek KEY, glycosylation, signaling pro 97.18
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 96.79
3czu_B182 Ephrin-A1; ATP-binding, kinase, nucleotide-binding 96.61
1shx_A138 Ephrin-A5; ephrin signaling, hormone-growth factor 96.06
3d12_B141 Ephrin-B3; beta propeller, protein-receptor comple 95.97
2x11_B177 Ephrin-A5; receptor-signaling protein complex, dev 95.95
2dv6_A 447 Nitrite reductase; electron transfer, reduction, d 95.16
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 95.12
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 94.56
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 94.52
2wo3_B157 Ephrin-A2; transferase-signaling protein complex, 94.52
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 94.07
2vsm_B140 Ephrin-B2; developmental protein, henipavirus, neu 93.83
1oe1_A 336 Dissimilatory copper-containing nitrite reductase; 86.09
1mzy_A 333 Copper-containing nitrite reductase; mutant M182T, 84.5
1fft_B315 Ubiquinol oxidase; electron transport, cytochrome 83.91
1kbv_A 327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 83.31
3hb3_B298 Cytochrome C oxidase subunit 2; electron transfer, 82.46
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 80.46
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1 Back     alignment and structure
Probab=100.00  E-value=4.5e-41  Score=262.40  Aligned_cols=111  Identities=28%  Similarity=0.525  Sum_probs=96.9

Q ss_pred             CCeEEEEcCCCCCCCCC---CCccccccCCceeeCCEEEEeEeCCcceEEEE-cccccCcCCCCCccceeecCCceEEEe
Q 030501           30 SPVLHRVGGGKYTWKPN---VNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQV-NKTNYEKCGDKDFIENVTRGGRDVFNL  105 (176)
Q Consensus        30 ~a~~~~VGg~~~GW~~~---~~Y~~WA~~~tF~vGD~LvF~y~~~~HsV~~V-~~~~Y~~C~~~~~~~~~~~~G~~~v~L  105 (176)
                      .+++|+|||+ .||+.+   .||++||++|+|++||+|+|+|.+++|+|+|| ++++|+.|+.++++..+ ++|+++|+|
T Consensus         2 ~a~~~~VGg~-~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~-~~G~~~v~L   79 (138)
T 1jer_A            2 QSTVHIVGDN-TGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDV-ERTSPVIER   79 (138)
T ss_dssp             CCCEEETTGG-GCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCC-CCCSCEEEE
T ss_pred             CceEEEECCc-CcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccc-cCCCeEEEe
Confidence            3678999996 699987   78999999999999999999999999999999 99999999999988765 568899999


Q ss_pred             -cCCccEEEEcCCCCCCcCCCeEEEEeeCCCCCCCCCC
Q 030501          106 -TEAKPFYFICGRGDYCSKGMKIAVHVETDPPPPTASP  142 (176)
Q Consensus       106 -~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~~~~~p  142 (176)
                       +++|++||||++++||++||||+|+|.+..++++++|
T Consensus        80 ~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~~p  117 (138)
T 1jer_A           80 LDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPP  117 (138)
T ss_dssp             CCSSEEEEEECCSTTTGGGTCEEEEEEECCC-------
T ss_pred             ccCCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCCCC
Confidence             9999999999999999999999999998776555444
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A Back     alignment and structure
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A Back     alignment and structure
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1 Back     alignment and structure
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1 Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5 Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B* Back     alignment and structure
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B* Back     alignment and structure
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus} Back     alignment and structure
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens} Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 176
d1ws8a_104 b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) 1e-29
d2cbpa_96 b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativ 2e-28
d1f56a_91 b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia olera 3e-26
d1jera_110 b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativ 5e-26
>d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} Length = 104 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Mavicyanin
species: Zucchini (Cucurbita pepo) [TaxId: 3663]

 Score =  102 bits (256), Expect = 1e-29
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 34  HRVGGGK-YTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFI 92
           H+VG    +T     ++ +WA    F+VGD L F ++   +NVLQV++  ++ C      
Sbjct: 5   HKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPA 64

Query: 93  ENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVE 132
            + T  G D   L     FYF+CG   +C  G K+ + V+
Sbjct: 65  ASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 103
>d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Length = 96 Back     information, alignment and structure
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 91 Back     information, alignment and structure
>d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Length = 110 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
d1ws8a_104 Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663 100.0
d2cbpa_96 Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3 100.0
d1jera_110 Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3 100.0
d1f56a_91 Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 99.97
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 99.1
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 99.08
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 99.0
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.96
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 98.92
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 98.88
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.81
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.79
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 98.75
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.7
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.69
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 98.66
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.57
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 98.56
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.51
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.14
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.91
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.51
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 97.49
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 97.32
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 97.2
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 96.8
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 96.21
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 96.18
d1shxa1138 Ephrin-a5 {Mouse (Mus musculus) [TaxId: 10090]} 95.72
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 95.42
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 95.19
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 94.71
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 94.27
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 93.67
d1ikop_141 Ephrin-b2 ectodomain {Mouse (Mus musculus) [TaxId: 92.22
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 91.73
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 90.99
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 89.96
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 89.28
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 87.69
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 81.89
>d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Mavicyanin
species: Zucchini (Cucurbita pepo) [TaxId: 3663]

Probab=100.00  E-value=1.3e-37  Score=230.03  Aligned_cols=101  Identities=30%  Similarity=0.683  Sum_probs=93.5

Q ss_pred             CeEEEEcCCCCCCCC--CCCccccccCCceeeCCEEEEeEeCCcceEEEEcccccCcCCCCCccceeecCCceEEEecCC
Q 030501           31 PVLHRVGGGKYTWKP--NVNFTQWAEHQHFYVGDWLYFGFDKHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEA  108 (176)
Q Consensus        31 a~~~~VGg~~~GW~~--~~~Y~~WA~~~tF~vGD~LvF~y~~~~HsV~~V~~~~Y~~C~~~~~~~~~~~~G~~~v~L~~~  108 (176)
                      +++|+|||+ .||+.  +.||++|+++++|++||+|+|+|+++.|+|+||++++|+.|+..+++... .+|++.|+|+++
T Consensus         2 at~~~VGg~-~gW~~~~~~~Y~~Wa~~~~f~vGD~l~F~y~~~~h~V~~v~~~~y~~C~~~~~~~~~-~~G~~~v~l~~~   79 (104)
T d1ws8a_           2 ATVHKVGDS-TGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASY-TSGADSIPLKRP   79 (104)
T ss_dssp             CCEEETTGG-GCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEE-CSSEEEEECCSS
T ss_pred             CcEEEeCCc-CccCcCCCcCHHHHhhCCcCCCCCEEEEEECCCCceEEEECHHHhcCCcCCCccccc-cCCCeEEEEecC
Confidence            578999997 79984  56899999999999999999999999999999999999999999987654 578899999999


Q ss_pred             ccEEEEcCCCCCCcCCCeEEEEeeC
Q 030501          109 KPFYFICGRGDYCSKGMKIAVHVET  133 (176)
Q Consensus       109 G~~YFiC~v~~HC~~GmKl~I~V~~  133 (176)
                      |++||||++++||++||||.|+|++
T Consensus        80 g~~yF~C~~~~HC~~Gmkl~I~V~P  104 (104)
T d1ws8a_          80 GTFYFLCGIPGHCQLGQKVEIKVDP  104 (104)
T ss_dssp             EEEEEECCSTTTTTTTCEEEEEECC
T ss_pred             ccEEEECCCcchhhCCCEEEEEECC
Confidence            9999999999999999999999974
>d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Back     information, alignment and structure
>d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Back     information, alignment and structure
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1shxa1 b.6.1.5 (A:32-170) Ephrin-a5 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1ikop_ b.6.1.5 (P:) Ephrin-b2 ectodomain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure