Citrus Sinensis ID: 030629

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVLQLQLCVCVCVCSDLYTAPT
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccEEEcccccccHHHHHHHccccccccccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccEEEEEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mdrvrrpdrsdvhlsreeEAKMEDEVRENfenlapkrhtkpqrsdyssqyvdafangsdsnqeySQFQHLqandsqkliwngsevteefqeteyykdlnrinkdhhttgtgfikmenangksfilapdnddahhssckgnpatnewipsaddSVLQLQLCVCVCvcsdlytapt
Flexible Loop (DISEMBL)
mdrvrrpdrsdvhlsreeeakmedevrenfenlapkrhtkpqrsdyssQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVLQLQLCVCVCVCSDLYTAPT
Low Complexity Region (SEG)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADdsvlqlqlcvcvcvcsdlYTAPT
Disordered region (IsUnstruct)
****************************************************************************KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFIL*******************EWIPSADDSVLQLQLCVCVCVCSDLYT***
Disordered Region (DISOPRED)
***********************DEVRENFENLA***************************Q****F*****************VTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFIL**************NPATNEWIPSADDSVLQLQLCVCVCVCSDLYTAP*
Disordered Region (DISEMBL)
*************LSREEEAKMEDEVRENFENLAPK**********SSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVLQLQLCVCVCVCSDLYTAPT
Disordered Region (DISPRO)
***********************DEVRENFENLAPK**********************DSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPD****H*SSCKGNPATNEWIPSADDSVLQLQLCVCVCVCSDLYT***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVLQLQLCVCVCVCSDLYTAPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
255558834	166	conserved hypothetical protein [Ricinus	0.879	0.921	0.612	2e-47
300432700	166	conserved hypothetical protein 10 [Hevea	0.919	0.963	0.6	3e-46
300432698	169	conserved hypothetical protein 9 [Hevea	0.879	0.905	0.620	8e-46
300432702	169	conserved hypothetical protein 11 [Hevea	0.879	0.905	0.607	1e-45
356566203	169	PREDICTED: uncharacterized protein LOC10	0.873	0.899	0.603	1e-45
388511711	167	unknown [Lotus japonicus]	0.839	0.874	0.607	8e-42
351734542	171	uncharacterized protein LOC100306349 [Gl	0.873	0.888	0.571	3e-41
217070972	166	unknown [Medicago truncatula]	0.827	0.867	0.610	4e-41
225434704	166	PREDICTED: uncharacterized protein LOC10	0.879	0.921	0.606	2e-40
388507566	166	unknown [Medicago truncatula]	0.827	0.867	0.603	2e-40

>gi|255558834|ref|XP_002520440.1| conserved hypothetical protein [Ricinus communis] gi|223540282|gb|EEF41853.1| conserved hypothetical protein [Ricinus communis]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 95/155 (61%), Positives = 117/155 (75%), Gaps = 2/155 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+  RRP+RSD+H++ EEE ++E E R++F+ LAPKRHTKPQRS+YSSQY DA       
Sbjct: 1   MECYRRPNRSDIHMTMEEEVRIEAETRDHFDGLAPKRHTKPQRSEYSSQYADANPLHPTF 60

Query: 61  NQEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENAN 119
             E+ +FQ LQ  D QKL +NG  E  +EF ETEYY+DLN I+K HHTTGTGFIKMENAN
Sbjct: 61  TPEFLEFQRLQ-TDPQKLRYNGKGEAGQEFAETEYYEDLNCIDKQHHTTGTGFIKMENAN 119

Query: 120 GKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           GK F LAPD+    H+SCKGNPATN+WIP+A D+ 
Sbjct: 120 GKGFTLAPDSVTCCHASCKGNPATNDWIPAAADTA 154

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432700|gb|ADK13067.1| conserved hypothetical protein 10 [Hevea brasiliensis]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 123/165 (74%), Gaps = 5/165 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGS 58
           M+   RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N  
Sbjct: 1   MEFHGRPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSL 60

Query: 59  DSN-QEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
            S+  E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKME
Sbjct: 61  PSSIPELVKFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKME 119

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVLQLQLCV 161
           N NGKSF LAPD     H+SC+GNPATNEWIP+A ++V  L   +
Sbjct: 120 NINGKSFSLAPDPVSCCHASCRGNPATNEWIPAAANTVPSLAYFI 164

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432698|gb|ADK13066.1| conserved hypothetical protein 9 [Hevea brasiliensis]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 98/158 (62%), Positives = 121/158 (76%), Gaps = 5/158 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGS 58
           M+   RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N  
Sbjct: 1   MEFHGRPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSL 60

Query: 59  DSN-QEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
            S+  E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKME
Sbjct: 61  PSSIPELVKFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKME 119

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           N NGKSF LAPD     H+SC+GNPATNEWIP+A ++V
Sbjct: 120 NINGKSFSLAPDPVSCCHASCRGNPATNEWIPAAANTV 157

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432702|gb|ADK13068.1| conserved hypothetical protein 11 [Hevea brasiliensis]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/158 (60%), Positives = 120/158 (75%), Gaps = 5/158 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFA---NG 57
           M+   RP RSD+HL+ EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDAF    + 
Sbjct: 1   MEFHGRPHRSDIHLAAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDAFPFTNSL 60

Query: 58  SDSNQEYSQFQHLQANDSQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
             S  E  +FQ L+ ND QKL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKME
Sbjct: 61  PSSIPELVEFQRLE-NDPQKLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKME 119

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           N NGKSF LAPD     H+SC+GNPATNEWIP+A ++V
Sbjct: 120 NINGKSFSLAPDPVSCCHASCRGNPATNEWIPAAANTV 157

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566203|ref|XP_003551324.1| PREDICTED: uncharacterized protein LOC100811254 [Glycine max]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 119/159 (74%), Gaps = 7/159 (4%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + RE F+ +AP+RHTKPQRSDYS+QYVDAF+N   S
Sbjct: 1   MECYTRPNRSDIHLSAEEEATIEAKTREYFDGVAPQRHTKPQRSDYSAQYVDAFSNAHHS 60

Query: 61  N---QEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM 115
           +    E +QFQ LQ ND Q  KL++NGS+V EEF ETEYY+DLN ++K HHTTGTGFIK+
Sbjct: 61  SLTIPELTQFQLLQ-NDPQEKKLVYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFIKV 119

Query: 116 ENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           E  NG  F + PDND   H SCKGNPATN+W+P+    V
Sbjct: 120 E-KNGNDFHIEPDNDTGCHHSCKGNPATNDWVPAPSTEV 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511711|gb|AFK43917.1| unknown [Lotus japonicus]

 Score =  174 bits (442), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 7/153 (4%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANG--S 58
           M+   RP+RSD HLS EEEA +E + RE FE  APKRHTKPQRS+YSSQYVD   NG  +
Sbjct: 1   MECCGRPNRSDSHLSAEEEATIEAQTREYFEEGAPKRHTKPQRSEYSSQYVDNI-NGVSN 59

Query: 59  DSNQEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 116
           DS  E  QFQ L+ ND Q  KL++NG++V EEF ETEYYKDLN ++K HHTTG GFI+++
Sbjct: 60  DSTPEMLQFQRLE-NDPQEKKLVYNGNQVAEEFVETEYYKDLNNVDKHHHTTGKGFIQVD 118

Query: 117 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPS 149
            + G  F + PDND  HH S KGNPATNEW+P+
Sbjct: 119 KS-GTGFHIEPDNDTGHHHSSKGNPATNEWVPA 150

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734542|ref|NP_001237416.1| uncharacterized protein LOC100306349 [Glycine max] gi|255628273|gb|ACU14481.1| unknown [Glycine max]

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/161 (57%), Positives = 117/161 (72%), Gaps = 9/161 (5%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + R+ F+ +AP+RHTKPQRS+YS+Q VDAF+N   S
Sbjct: 1   MEFYTRPNRSDIHLSAEEEATIEAKTRDYFDGVAPQRHTKPQRSEYSAQNVDAFSNAHHS 60

Query: 61  NQ-----EYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFI 113
           +      E+ QFQ L+ ND Q  KL +NGS+V EEF ETEYY+DLN ++K HHTTGTGFI
Sbjct: 61  SSSSSIPEFMQFQRLE-NDPQEKKLEYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFI 119

Query: 114 KMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           K+E  NG  F + PDND   H SCK NPATN+W+PS  + V
Sbjct: 120 KVE-KNGNDFHIEPDNDTGCHHSCKCNPATNDWVPSPSNEV 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217070972|gb|ACJ83846.1| unknown [Medicago truncatula]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/154 (61%), Positives = 120/154 (77%), Gaps = 10/154 (6%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSD- 59
           M+ VRRP+RSD HLS EEEA +E + R +FE +APKRHTKPQRS+Y+SQYVD+  N SD 
Sbjct: 1   MEDVRRPNRSDTHLSAEEEASIEAKTRHHFEEVAPKRHTKPQRSEYASQYVDS--NVSDN 58

Query: 60  SNQEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN 117
           S  E  QFQ L+ ND Q  KL+++G+EV+EEF ETEYYKDLN ++K HHTTG GFI++E 
Sbjct: 59  SVPEMLQFQRLE-NDPQEKKLVYDGNEVSEEFVETEYYKDLNSVDKHHHTTGKGFIQVEK 117

Query: 118 ANGKSFILAPDND--DAHHSSCKGNPATNEWIPS 149
           ++  SF + PDND  D+HHS  KGNPATN+W+P+
Sbjct: 118 SDT-SFHIEPDNDTHDSHHS-TKGNPATNDWVPA 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434704|ref|XP_002280988.1| PREDICTED: uncharacterized protein LOC100258718 [Vitis vinifera] gi|297745958|emb|CBI16014.3| unnamed protein product [Vitis vinifera]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 123/155 (79%), Gaps = 2/155 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSDVHL++EE A++E+E R+ F+ +APKRH KP RS++SSQYVD  ++    
Sbjct: 1   MECCGRPNRSDVHLTQEEAARIEEETRDYFDGIAPKRHAKPSRSEHSSQYVDPPSDRQHE 60

Query: 61  N-QEYSQFQHLQANDSQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENAN 119
           +  E+ +FQHL+ ND QKL+++GSEVTEEF ETEYY+DLN I+K HHTTGTGFIKMENA+
Sbjct: 61  DIPEFLKFQHLE-NDPQKLVYSGSEVTEEFVETEYYQDLNCIDKQHHTTGTGFIKMENAD 119

Query: 120 GKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 154
           GKSF LA ++     +SCKGNPATN+WIP+A D V
Sbjct: 120 GKSFNLAANSATCCQASCKGNPATNDWIPAAADKV 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507566|gb|AFK41849.1| unknown [Medicago truncatula]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/154 (60%), Positives = 120/154 (77%), Gaps = 10/154 (6%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSD- 59
           M+ VRRP+RSD HLS EEEA +E + R +FE +APKRHTKPQRS+Y+SQYVD+  N SD 
Sbjct: 1   MEDVRRPNRSDTHLSAEEEASIEAKTRHHFEEVAPKRHTKPQRSEYASQYVDS--NVSDN 58

Query: 60  SNQEYSQFQHLQANDSQ--KLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN 117
           S  E  QFQ L+ ND Q  KL+++G+EV+EEF ETEYYKDLN ++K HHTTG GFI++E 
Sbjct: 59  SVPEMLQFQRLE-NDPQEKKLVYDGNEVSEEFVETEYYKDLNSVDKHHHTTGKGFIQVEK 117

Query: 118 ANGKSFILAPDND--DAHHSSCKGNPATNEWIPS 149
           ++  SF + PD D  D+HHS+ KGNPATN+W+P+
Sbjct: 118 SDT-SFHIEPDTDTHDSHHST-KGNPATNDWVPA 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:2115189	173	MEE59 "AT4G37300" [Arabidopsis	0.839	0.843	0.381	4.3e-22

TAIR|locus:2115189 MEE59 "AT4G37300" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 58/152 (38%), Positives = 88/152 (57%)

Query:     6 RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYS 65
             +P RSD     E++ K  +++R +F++LAPKR TKP RS+       + ++    + E  
Sbjct:     5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSFSASDKITDHPEAD 64

Query:    66 QFQHLQANDSQKLIWNG--SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM-ENANGK- 121
             +FQ LQ+    K++  G  S V +EF ETEYY +L  I+K HHTTG+GFI + +  NG+ 
Sbjct:    65 KFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVKEDNGEE 124

Query:   122 --SFILAPDNDDAHHSSCKGNPATNEWIPSAD 151
               +   A   D    +  + NPATNEWIP+ +
Sbjct:   125 SEAVTAAAIGDGGEKAVYRSNPATNEWIPATE 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.125   0.367    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       156   0.00073  106 3  11 23  0.45    32
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  164 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.58u 0.18s 20.76t   Elapsed:  00:00:01
  Total cpu time:  20.58u 0.18s 20.76t   Elapsed:  00:00:01
  Start:  Sat May 11 08:15:00 2013   End:  Sat May 11 08:15:01 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00