Citrus Sinensis ID: 030654

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Secondary Structure (PSIPRED)
ccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cEEEEEccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccEcccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
malqihspssfttkpyhplqskpkpksnlTLTLIKsqntpintepieesasapakkpkptspgqgfgsstlssssstsgkpsvadgskkkkqpkgrrerasvvrrnpveklsvMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Flexible Loop (DISEMBL)
malqihspssfttkpyhplqskpkpksnLTLTLIKSQNTPINTEPieesasapakkpkptspgqgfgsstlssssstsgkpsvadgskkkkqpkgrrerasvvrrnpveklsvmskedeAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Low Complexity Region (SEG)
MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEEsasapakkpkptspGQGFGsstlssssstsGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVmskedeakakemmknesaFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Disordered region (IsUnstruct)
**********************************************************************************************************************************AFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKL***
Disordered Region (DISOPRED)
********S****KPY*******************************************************************************************************************FLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Disordered Region (DISEMBL)
*************************KSNLTLTLIKSQNTPINTEPI********************************************************VRRNPVEKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Disordered Region (DISPRO)
MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNT*************************************************************SVVRRNPVEKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAASVKKLSFLHFLTYVKLWKLSNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
255539719	189	conserved hypothetical protein [Ricinus	0.787	0.724	0.560	2e-24
147823296	132	hypothetical protein VITISV_035260 [Viti	0.729	0.962	0.431	2e-21
225455677	175	PREDICTED: uncharacterized protein LOC10	0.729	0.725	0.431	3e-21
224134514	184	predicted protein [Populus trichocarpa]	0.557	0.527	0.558	1e-20
449460802	193	PREDICTED: uncharacterized protein LOC10	0.793	0.715	0.477	4e-20
79330574	185	low psii accumulation2 protein [Arabidop	0.787	0.740	0.418	2e-17
297792467	184	hypothetical protein ARALYDRAFT_495227 [	0.781	0.739	0.444	2e-16
359807564	173	uncharacterized protein LOC100777895 [Gl	0.540	0.543	0.485	3e-13
9758196	860	unnamed protein product [Arabidopsis tha	0.344	0.069	0.587	5e-10
388498890	168	unknown [Lotus japonicus]	0.448	0.464	0.481	6e-10

>gi|255539719|ref|XP_002510924.1| conserved hypothetical protein [Ricinus communis] gi|223550039|gb|EEF51526.1| conserved hypothetical protein [Ricinus communis]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 20/157 (12%)

Query: 1   MALQIHSPSSFTTK---PYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKP 57
           MALQIHS S         YH L    KPKS LT   I+SQ      +P  ++++AP K  
Sbjct: 1   MALQIHSTSFLANNKSFQYHHLLYS-KPKSKLT---IQSQ------KPTPDNSTAPKK-- 48

Query: 58  KPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKE 117
            PT PG GFGSS+ SSSSS+  K S  D S KKK  KG+RERAS++RR+PVE+ + +S+E
Sbjct: 49  -PTPPGLGFGSSSPSSSSSS--KASGTDVSNKKKH-KGKRERASIIRRSPVERPAFVSQE 104

Query: 118 -DEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
            DEAKAKE  +NESAFLLAWLG+GGIIL QGI L+AS
Sbjct: 105 IDEAKAKEQGRNESAFLLAWLGLGGIILVQGIILSAS 141

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147823296|emb|CAN62068.1| hypothetical protein VITISV_035260 [Vitis vinifera]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 26/153 (16%)

Query: 1   MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPT 60
           MA+ I  P +    P     +KP+ +       IK Q++   +EP + S SA     +PT
Sbjct: 1   MAVLIQKPHALLHTPILITPTKPRLR-------IKCQDS---SEPQKPSTSA-----QPT 45

Query: 61  SPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEA 120
           SPGQGFGS++           S    +  KK+ KGRRERAS++RR+PV+K   +  E++ 
Sbjct: 46  SPGQGFGSAS-----------STVKTAVNKKKEKGRRERASIIRRSPVQKPEFLGVEEQG 94

Query: 121 KAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
           ++KE  +NESAFLLAWLG+GGIIL +GI LAAS
Sbjct: 95  ESKEQGRNESAFLLAWLGLGGIILVEGIVLAAS 127

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455677|ref|XP_002264722.1| PREDICTED: uncharacterized protein LOC100261162 [Vitis vinifera] gi|296084154|emb|CBI24542.3| unnamed protein product [Vitis vinifera]

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 26/153 (16%)

Query: 1   MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPT 60
           MA+ I  P +    P     +KP+ +       IK Q++   +EP + S SA     +PT
Sbjct: 1   MAVLIQKPHALLHTPILITPTKPRLR-------IKCQDS---SEPQKPSTSA-----QPT 45

Query: 61  SPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEA 120
           SPGQGFGS++           S    +  KK+ KGRRERAS++RR+PV+K   +  E++ 
Sbjct: 46  SPGQGFGSAS-----------STVKTAVNKKKEKGRRERASIIRRSPVQKPEFLGVEEQG 94

Query: 121 KAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
           ++KE  +NESAFLLAWLG+GGIIL +GI LAAS
Sbjct: 95  ESKEQGRNESAFLLAWLGLGGIILVEGIVLAAS 127

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134514|ref|XP_002321842.1| predicted protein [Populus trichocarpa] gi|222868838|gb|EEF05969.1| predicted protein [Populus trichocarpa]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 5/102 (4%)

Query: 53  PAKKPKPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKG-RRERASVVRRNPVEKL 111
           P KKP   SPGQGFGS + ++++++      A GS+ K +PKG RRERAS++RR P EK 
Sbjct: 39  PEKKPSTVSPGQGFGSQSAAAATTSK----TASGSESKNKPKGNRRERASIIRRAPAEKP 94

Query: 112 SVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
             +S+E+E K KE  +NE+AFLLAWLG+GGIIL +GI LAAS
Sbjct: 95  GFISQENEVKVKEQGRNETAFLLAWLGLGGIILVEGILLAAS 136

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460802|ref|XP_004148133.1| PREDICTED: uncharacterized protein LOC101209962 [Cucumis sativus] gi|449531185|ref|XP_004172568.1| PREDICTED: uncharacterized LOC101209962 [Cucumis sativus]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 95/159 (59%), Gaps = 21/159 (13%)

Query: 1   MALQI--HSPSSFTTKPYH----PLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPA 54
           MALQI  HSPSSFT +PYH     L    KPK      +IKSQN   + +PI +      
Sbjct: 1   MALQILHHSPSSFTKRPYHLPNPSLHFSSKPK-----FIIKSQNPSESDKPISKVVD--- 52

Query: 55  KKPKPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVM 114
             P  TS  QGFGSS+  S+S++          K  KQ KG+R+RAS++RR+PVEK   +
Sbjct: 53  DAPIATSSPQGFGSSSPQSTSTSKST------PKSLKQ-KGKRQRASIIRRSPVEKPVFV 105

Query: 115 SKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
            + DE  AKE  +NES FLL WLG+G +IL QGI LAAS
Sbjct: 106 GQVDEQVAKEQGRNESYFLLTWLGLGVVILVQGIVLAAS 144

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79330574|ref|NP_001032057.1| low psii accumulation2 protein [Arabidopsis thaliana] gi|332008713|gb|AED96096.1| low psii accumulation2 protein [Arabidopsis thaliana]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 16/153 (10%)

Query: 1   MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPT 60
           MALQIHSP SF+T+PYH   +   P+       IK QN+ I ++  E+        P  +
Sbjct: 1   MALQIHSPCSFSTRPYHLFFTTRNPR-----FAIKCQNSQIESDTTED--------PSRS 47

Query: 61  SPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEA 120
                 G    S +SS+S    ++  +   K+ KG+RE   V RR PVEK   MS+E  A
Sbjct: 48  KNSSSSGVGFGSPASSSSPAKKLSAATSGNKKGKGKRE---VNRRAPVEKPVFMSEEGAA 104

Query: 121 KAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
           KA+E  +NE+AFLL WLG+G +IL +GI LAAS
Sbjct: 105 KAEEQRQNENAFLLTWLGLGIVILIEGIILAAS 137

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792467|ref|XP_002864118.1| hypothetical protein ARALYDRAFT_495227 [Arabidopsis lyrata subsp. lyrata] gi|297309953|gb|EFH40377.1| hypothetical protein ARALYDRAFT_495227 [Arabidopsis lyrata subsp. lyrata]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/153 (44%), Positives = 88/153 (57%), Gaps = 17/153 (11%)

Query: 1   MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEESASAPAKKPKPT 60
           MALQIHS   F+T+PYH   +   P+       IK QN+ I +E  E+ A     +PK +
Sbjct: 1   MALQIHSSCFFSTRPYHLFITTRNPR-----FAIKCQNSQIESETTEDPA-----QPKNS 50

Query: 61  SPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVMSKEDEA 120
           S          S+SSS + K S A    KK   KG+RE   + RR PVEK   MS+E  A
Sbjct: 51  SASGV--GFGSSASSSPAKKLSAATSGIKKG--KGKRE---LKRRAPVEKPVFMSEEGAA 103

Query: 121 KAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
           KA+E  +NE+AFLL WLG+G +IL +GI LAAS
Sbjct: 104 KAEEQRRNENAFLLTWLGLGIVILIEGIILAAS 136

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807564|ref|NP_001241154.1| uncharacterized protein LOC100777895 [Glycine max] gi|255626341|gb|ACU13515.1| unknown [Glycine max] gi|255634813|gb|ACU17767.1| unknown [Glycine max]

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 11/105 (10%)

Query: 49  SASAPAKKPKPTSPGQGFGSSTLSSSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPV 108
           S  A +    P+  G GFGSS       T+  P        KK+ K +RERAS++RR+P+
Sbjct: 32  SEKASSDDSGPSKTGVGFGSS------DTAAVPV-----SSKKKKKAQRERASIIRRSPL 80

Query: 109 EKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIALAAS 153
           EK + +S++   KAKE  KNESAFLLAWLG G +IL +GIALAAS
Sbjct: 81  EKPAFVSEQQVGKAKEENKNESAFLLAWLGFGVVILVEGIALAAS 125

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758196|dbj|BAB08670.1| unnamed protein product [Arabidopsis thaliana]

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 3/63 (4%)

Query: 91  KQPKGRRERASVVRRNPVEKLSVMSKEDEAKAKEMMKNESAFLLAWLGVGGIILFQGIAL 150
           K+ KG+RE   V RR PVEK   MS+E  AKA+E  +NE+AFLL WLG+G +IL +GI L
Sbjct: 753 KKGKGKRE---VNRRAPVEKPVFMSEEGAAKAEEQRQNENAFLLTWLGLGIVILIEGIIL 809

Query: 151 AAS 153
           AAS
Sbjct: 810 AAS 812

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498890|gb|AFK37511.1| unknown [Lotus japonicus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 5/83 (6%)

Query: 73  SSSSTSGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVM--SKEDEAKAKEMMKNES 130
           +S S   KP V  G  K+K  KGRR    ++RR+PVEK ++   S++ + +  E  K E+
Sbjct: 41  ASDSAPQKPGVGFGQTKQKD-KGRRR--DIIRRSPVEKPALFDSSEQKQQQTVEQSKTET 97

Query: 131 AFLLAWLGVGGIILFQGIALAAS 153
           AFLLAWLG G +IL +GIALAAS
Sbjct: 98  AFLLAWLGFGAVILVEGIALAAS 120

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:1009023492	185	LPA2 "low psii accumulation2"	0.787	0.740	0.366	4.9e-14

TAIR|locus:1009023492 LPA2 "low psii accumulation2" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 56/153 (36%), Positives = 68/153 (44%)

Query:     1 MALQIHSPSSFTTKPYHPLQSKPKPKSNLTLTLIKSQNTPINTEPIEEXXXXXXXXXXXX 60
             MALQIHSP SF+T+PYH   +   P+       IK QN+ I ++  E+            
Sbjct:     1 MALQIHSPCSFSTRPYHLFFTTRNPRF-----AIKCQNSQIESDTTEDPSRSKNSSSS-- 53

Query:    61 XXGQGFGXXXXXXXXXXXGKPSVADGSKKKKQPKGRRERASVVRRNPVEKLSVXXXXXXX 120
               G GFG            K S A    KK   KG+RE   V RR PVEK          
Sbjct:    54 --GVGFGSPASSSSPAK--KLSAATSGNKKG--KGKRE---VNRRAPVEKPVFMSEEGAA 104

Query:   121 XXXXXXXXXXXFLLAWLGVGGIILFQGIALAAS 153
                        FLL WLG+G +IL +GI LAAS
Sbjct:   105 KAEEQRQNENAFLLTWLGLGIVILIEGIILAAS 137


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       131   0.00091  102 3  11 22  0.43    31
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.65u 0.15s 11.80t   Elapsed:  00:00:01
  Total cpu time:  11.65u 0.15s 11.80t   Elapsed:  00:00:01
  Start:  Thu May  9 14:16:50 2013   End:  Thu May  9 14:16:51 2013

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0010207 "photosystem II assembly" evidence=RCA;IMP

GO:0042651 "thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00008760001	SubName- Full=Chromosome chr16 scaffold_207, whole genome shotgun sequence; (175 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037631001	SubName- Full=Chromosome chr9 scaffold_90, whole genome shotgun sequence; (378 aa)				•	•				0.537

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00