Citrus Sinensis ID: 030668

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
Protein Sequence
MMSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccEEEEEEccccEEEEEEccEEEEEEccEEEEEEccEEEEEEEcccccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEEccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccEEEEEcccccEEEEEEcccEEEEEcccEEEEEEcEEEEEEEcccEccEcEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEccccHHHHccccccccccccccHHHHHcccccEEEcc
Coil and Loop (DISEMBL)
MMSLTPISTLLLSLLFIFLHQSavatsslsansdqlsaydilqsynfpagllpkgitqydidretgqfhayldgtcsfslegsyqlkYKSKISGyisenkltsltgVSVKVLFLWLNIVEvtrngddidfsVGIASASFaidnfyecpqcgcgldcvsgqvSKLRVKSLVSSI
Flexible Loop (DISEMBL)
MMSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI
Low Complexity Region (SEG)
MMSltpistlllsllfiflHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQvsklrvkslvssI
Disordered region (IsUnstruct)
*****PISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLR********
Disordered Region (DISOPRED)
*********LLLSLLFIFLHQSAVA***********SAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKL**KS*****
Disordered Region (DISEMBL)
MMSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI
Disordered Region (DISPRO)
***LTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVS**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	173	2.2.26 [Sep-21-2011]
Q9M015	170	Uncharacterized protein A	no	no	0.653	0.664	0.241	2e-09

>sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 3/116 (2%)

Query: 40  DILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISEN 99
           ++L+ Y+ P G+ P   T Y+ D ET +    +   C    + S  LK+ + ++G++ + 
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115

Query: 100 KLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLD 155
           KLT + G+  KV+ +W+ +  ++ +   + F+ G+  +     + YE  + G  +D
Sbjct: 116 KLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGMKKSRSR--DAYEVQRNGLRVD 168

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
225437416	162	PREDICTED: uncharacterized protein LOC10	0.907	0.969	0.693	1e-60
147795023	162	hypothetical protein VITISV_014708 [Viti	0.907	0.969	0.693	4e-60
224128454	167	predicted protein [Populus trichocarpa]	0.953	0.988	0.616	3e-53
118484288	167	unknown [Populus trichocarpa]	0.890	0.922	0.636	2e-52
224068354	146	predicted protein [Populus trichocarpa]	0.820	0.972	0.666	8e-52
18379014	166	uncharacterized protein [Arabidopsis tha	0.953	0.993	0.595	1e-51
116830349	167	unknown [Arabidopsis thaliana]	0.953	0.988	0.595	1e-51
21554037	167	unknown [Arabidopsis thaliana]	0.959	0.994	0.596	1e-50
225450691	170	PREDICTED: uncharacterized protein LOC10	0.919	0.935	0.585	2e-50
255564210	168	conserved hypothetical protein [Ricinus	0.728	0.75	0.722	7e-50

>gi|225437416|ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 136/163 (83%), Gaps = 6/163 (3%)

Query: 11  LLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHA 70
           +L L  IFL      +S ++A+ D  +AY+ILQSYNFP GLLPKG   YD+D++TG+F+A
Sbjct: 6   VLVLCVIFL------SSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNA 59

Query: 71  YLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDF 130
           Y +G+C FSLEGSYQLKYKS ISGYIS+NKLT L+G+SVKVLFLWLNIVEVTRNGDD++F
Sbjct: 60  YFNGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEF 119

Query: 131 SVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI 173
           SVGIASA+F IDNF+ECPQCGCGLDCV+GQV KL+    VSSI
Sbjct: 120 SVGIASAAFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFVSSI 162

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795023|emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]

 Score =  235 bits (600), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 135/163 (82%), Gaps = 6/163 (3%)

Query: 11  LLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHA 70
           +L L  IFL      +S ++A+ D  +AY+ILQSYNFP GLLPKG   YD+D++TG+F+A
Sbjct: 6   VLVLCVIFL------SSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNA 59

Query: 71  YLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDF 130
           Y +G+C FSLEGSYQLKYKS ISGYIS+NKLT L+G SVKVLFLWLNIVEVTRNGDD++F
Sbjct: 60  YFNGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEF 119

Query: 131 SVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI 173
           SVGIASA+F IDNF+ECPQCGCGLDCV+GQV KL+    VSSI
Sbjct: 120 SVGIASAAFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFVSSI 162

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128454|ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|222861109|gb|EEE98651.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/172 (61%), Positives = 130/172 (75%), Gaps = 7/172 (4%)

Query: 2   MSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDI 61
           MS T I TL L L         V +SSL+   +  + Y+I+  YNFP G+LPKG T Y +
Sbjct: 1   MSFTAIFTLFLIL------SPLVTSSSLTITDNLPTVYEIIAGYNFPIGILPKGATGYKL 54

Query: 62  DRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEV 121
           D+ TG+F A+L+G+CSFS+EGSYQL YKS ISGYIS+N+L SL+GVSVKVLF WLNIVEV
Sbjct: 55  DKTTGEFGAFLNGSCSFSVEGSYQLNYKSTISGYISDNRLKSLSGVSVKVLFFWLNIVEV 114

Query: 122 TRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQV-SKLRVKSLVSS 172
            RNGD++DFSVGIASASF IDNFYECPQCGCGL+C + ++ +KLR    VSS
Sbjct: 115 IRNGDELDFSVGIASASFPIDNFYECPQCGCGLNCNNVELATKLRSNPFVSS 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484288|gb|ABK94023.1| unknown [Populus trichocarpa]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/157 (63%), Positives = 125/157 (79%), Gaps = 3/157 (1%)

Query: 13  SLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYL 72
           +L F F+  S++A SS + N    + YD+L  YNFP G+LPKG T YD+D+ TG+F AYL
Sbjct: 6   NLTFFFVLLSSLAISSFTDNLP--TTYDVLSGYNFPIGILPKGATGYDLDKATGRFRAYL 63

Query: 73  DGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSV 132
           +G+CSFSLEGSYQLKYKS +SGYISEN+LT L+GVSVK+LF WL+IVEV R GD+++FSV
Sbjct: 64  NGSCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKILFFWLDIVEVVRKGDELEFSV 123

Query: 133 GIASASFAIDNFYECPQCGCGLDCVS-GQVSKLRVKS 168
           GI SASFAIDNFYECPQCGCG +C +  + +KLR  S
Sbjct: 124 GITSASFAIDNFYECPQCGCGFNCNNVERATKLRSGS 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068354|ref|XP_002302720.1| predicted protein [Populus trichocarpa] gi|222844446|gb|EEE81993.1| predicted protein [Populus trichocarpa]

 Score =  208 bits (529), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 118/144 (81%), Gaps = 2/144 (1%)

Query: 13  SLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYL 72
           +L F F+  S++A SS + N    + YD+L  YNFP G+LPKG T YD+D+ TG+F AYL
Sbjct: 3   NLTFFFVLLSSLAISSFTDNLP--TTYDVLSGYNFPIGILPKGATGYDLDKATGRFRAYL 60

Query: 73  DGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSV 132
           +G+CSFSLEGSYQLKYKS +SGYISEN+LT L+GVSVK+LF WL+IVEV R GD+++FSV
Sbjct: 61  NGSCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKILFFWLDIVEVVRKGDELEFSV 120

Query: 133 GIASASFAIDNFYECPQCGCGLDC 156
           GI SASFAIDNFYECPQCGCG +C
Sbjct: 121 GITSASFAIDNFYECPQCGCGFNC 144

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18379014|ref|NP_563664.1| uncharacterized protein [Arabidopsis thaliana] gi|6056421|gb|AAF02885.1|AC009525_19 Unknown protein [Arabidopsis thaliana] gi|14423480|gb|AAK62422.1|AF386977_1 Unknown protein [Arabidopsis thaliana] gi|18377524|gb|AAL66928.1| unknown protein [Arabidopsis thaliana] gi|21555558|gb|AAM63885.1| unknown [Arabidopsis thaliana] gi|91805319|gb|ABE65389.1| unknown [Arabidopsis thaliana] gi|332189353|gb|AEE27474.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 126/173 (72%), Gaps = 8/173 (4%)

Query: 2   MSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQL-SAYDILQSYNFPAGLLPKGITQYD 60
           M+L PIS       F+F   S +  +   AN D + +AY +LQSYNFP G+LPKG+  YD
Sbjct: 1   MTLLPISIFFF---FLFCIPSPLIAA---ANDDDIPTAYTLLQSYNFPVGILPKGVVSYD 54

Query: 61  IDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVE 120
           +D+ TGQFHAY + +CSF+L+GSYQL YKS ISGYISENK+T LTGV VKVLFLWLNIVE
Sbjct: 55  LDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVE 114

Query: 121 VTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI 173
           V RNGD+++FSVGI SA+F ID FYE PQCGCG DC + +   L     VSS+
Sbjct: 115 VIRNGDELEFSVGITSANFEIDEFYESPQCGCGFDCKT-KTKTLGRNPFVSSV 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830349|gb|ABK28132.1| unknown [Arabidopsis thaliana]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 126/173 (72%), Gaps = 8/173 (4%)

Query: 2   MSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQL-SAYDILQSYNFPAGLLPKGITQYD 60
           M+L PIS       F+F   S +  +   AN D + +AY +LQSYNFP G+LPKG+  YD
Sbjct: 1   MTLLPISIFFF---FLFCIPSPLIAA---ANDDDIPTAYTLLQSYNFPVGILPKGVVSYD 54

Query: 61  IDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVE 120
           +D+ TGQFHAY + +CSF+L+GSYQL YKS ISGYISENK+T LTGV VKVLFLWLNIVE
Sbjct: 55  LDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVE 114

Query: 121 VTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSSI 173
           V RNGD+++FSVGI SA+F ID FYE PQCGCG DC + +   L     VSS+
Sbjct: 115 VIRNGDELEFSVGITSANFEIDEFYESPQCGCGFDCKT-KTKTLGRNPFVSSV 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554037|gb|AAM63118.1| unknown [Arabidopsis thaliana]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/171 (59%), Positives = 123/171 (71%), Gaps = 5/171 (2%)

Query: 2   MSLTPISTLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDI 61
           MS  PI  L+ S LF+    +AV T+   A SD  +AY +LQSYNFP G+LPKG+  YD+
Sbjct: 1   MSRLPI--LIASCLFLSSLTAAVVTA---AESDTPTAYSLLQSYNFPVGILPKGVVAYDL 55

Query: 62  DRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEV 121
           D  TG+FHAY + +CSF+L GSYQL YKS ISGYISENKL  LTGV VKVLFLWLNIVEV
Sbjct: 56  DTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEV 115

Query: 122 TRNGDDIDFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSS 172
            RNGD+++FSVGI SA+FAI  F E PQCGCG +C   ++  +     VSS
Sbjct: 116 IRNGDEMEFSVGITSANFAIQEFLESPQCGCGFECKDSKLDMIERNPFVSS 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450691|ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263080 [Vitis vinifera] gi|296089728|emb|CBI39547.3| unnamed protein product [Vitis vinifera]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 124/164 (75%), Gaps = 5/164 (3%)

Query: 9   TLLLSLLFIFLHQSAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQF 68
           +L  +L  I +H +  ++S+     D  + Y++LQ YNFP GLLPKG+  YD++  TG+F
Sbjct: 11  SLAATLCLILIHSTPASSSN-----DSPTVYEVLQDYNFPVGLLPKGVIGYDLNTSTGKF 65

Query: 69  HAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDI 128
            A  +G+CSFSLEGSYQLKYKS I G IS+ KL+SL GVSVK+ F+W++I+EV R+GDDI
Sbjct: 66  SASFNGSCSFSLEGSYQLKYKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRSGDDI 125

Query: 129 DFSVGIASASFAIDNFYECPQCGCGLDCVSGQVSKLRVKSLVSS 172
           DFSVGIASA F+IDNF ECPQCGCGL+C + QV+KLR    VSS
Sbjct: 126 DFSVGIASAGFSIDNFEECPQCGCGLNCGNRQVNKLRSNPFVSS 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564210|ref|XP_002523102.1| conserved hypothetical protein [Ricinus communis] gi|223537664|gb|EEF39287.1| conserved hypothetical protein [Ricinus communis]

 Score =  201 bits (512), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 109/126 (86%)

Query: 31  ANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKS 90
           A  D  +AY++L  YNFP G+LPKG+T Y++DR TG+F AYL+G+CSFSL+GSYQLKYKS
Sbjct: 21  AAGDTPTAYEVLAGYNFPVGILPKGVTGYELDRTTGKFRAYLNGSCSFSLQGSYQLKYKS 80

Query: 91  KISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQC 150
            ISGYIS+ KLT+L+GVSVKVLFLWLNIVEV R  +D+ FSVGIASASF++DNFY CPQC
Sbjct: 81  TISGYISDRKLTNLSGVSVKVLFLWLNIVEVVRAENDLQFSVGIASASFSLDNFYVCPQC 140

Query: 151 GCGLDC 156
           GCGLDC
Sbjct: 141 GCGLDC 146

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
TAIR|locus:505006096	166	AT1G02816 "AT1G02816" [Arabido	0.734	0.765	0.710	5.2e-49
TAIR|locus:2133264	167	AT4G02370 "AT4G02370" [Arabido	0.780	0.808	0.666	2.3e-46
TAIR|locus:2133254	154	AT4G02360 "AT4G02360" [Arabido	0.768	0.863	0.544	2.1e-36
TAIR|locus:505006095	149	AT1G02813 [Arabidopsis thalian	0.763	0.885	0.458	1.1e-30
TAIR|locus:2171297	195	AT5G16380 "AT5G16380" [Arabido	0.751	0.666	0.330	2e-15
TAIR|locus:2079601	169	AT3G07470 [Arabidopsis thalian	0.722	0.739	0.330	3e-14
TAIR|locus:2147610	181	AT5G19860 "AT5G19860" [Arabido	0.705	0.674	0.330	6.2e-14
TAIR|locus:2183134	151	AT5G19590 "AT5G19590" [Arabido	0.653	0.748	0.315	1.3e-13
TAIR|locus:2079701	271	AT3G07460 "AT3G07460" [Arabido	0.728	0.464	0.304	4.9e-13
TAIR|locus:2166178	170	AT5G37070 "AT5G37070" [Arabido	0.653	0.664	0.25	3.1e-12

TAIR|locus:505006096 AT1G02816 "AT1G02816" [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 91/128 (71%), Positives = 108/128 (84%)

Query:    30 SANSDQL-SAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKY 88
             +AN D + +AY +LQSYNFP G+LPKG+  YD+D+ TGQFHAY + +CSF+L+GSYQL Y
Sbjct:    23 AANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDY 82

Query:    89 KSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECP 148
             KS ISGYISENK+T LTGV VKVLFLWLNIVEV RNGD+++FSVGI SA+F ID FYE P
Sbjct:    83 KSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESP 142

Query:   149 QCGCGLDC 156
             QCGCG DC
Sbjct:   143 QCGCGFDC 150

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2133264 AT4G02370 "AT4G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 90/135 (66%), Positives = 105/135 (77%)

Query:    22 SAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLE 81
             S  A    +A SD  +AY +LQSYNFP G+LPKG+  YD+D  TG+FHAY + +CSF+L 
Sbjct:    16 SLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLV 75

Query:    82 GSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAI 141
             GSYQL YKS ISGYISENKL  LTGV VKVLFLWLNIVEV RNGD+++FSVGI SA+FAI
Sbjct:    76 GSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSANFAI 135

Query:   142 DNFYECPQCGCGLDC 156
               F E PQCGCG +C
Sbjct:   136 QEFLESPQCGCGFEC 150

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2133254 AT4G02360 "AT4G02360" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 73/134 (54%), Positives = 96/134 (71%)

Query:    26 TSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQ 85
             T S + +  + +AYD ++ YN P G+LPKG+  Y+++ +TG F  Y + TC F+++ SYQ
Sbjct:    17 TVSFAVSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQ-SYQ 75

Query:    86 LKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFY 145
             LKYKS ISG IS   + +L GVSVKVLF W+NI EV+ +G D+DFSVGIASASF   NF 
Sbjct:    76 LKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFE 135

Query:   146 ECPQCGCGLDCVSG 159
             E PQCGCG DC +G
Sbjct:   136 ESPQCGCGFDCNNG 149

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006095 AT1G02813 [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 61/133 (45%), Positives = 90/133 (67%)

Query:    24 VATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGS 83
             ++TS   +   + S Y +L++Y  P G+LP+G+  YD++R TG F    + TC FS++ S
Sbjct:    11 LSTSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSID-S 69

Query:    84 YQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDN 143
             Y++KYK  ISG I+  ++  L GVSVKVLF W+NI EV+R+GDD++F VG AS  F+   
Sbjct:    70 YKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEEFSSKY 129

Query:   144 FYECPQCGCGLDC 156
             F + P+CGCG +C
Sbjct:   130 FVDSPKCGCGFNC 142

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2171297 AT5G16380 "AT5G16380" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 47/142 (33%), Positives = 75/142 (52%)

Query:    22 SAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLE 81
             S++    LS+  D  S YD L+  N PAG++PKG+T + ID +TG+F   L   C    E
Sbjct:    16 SSILFPQLSSLPDP-SFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFE 74

Query:    82 GSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNI--VEVTRNGDD-IDFSVGIASAS 138
               +   Y   ISG +S+ ++ +L+GV+ K LFLW  +  + V       I F VG+A   
Sbjct:    75 NQFHFDYN--ISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQ 132

Query:   139 FAIDNFYECPQCGCGLDCVSGQ 160
              ++ + +E P+     DC + +
Sbjct:   133 LSL-SLFESPR-----DCTAAE 148

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2079601 AT3G07470 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 46/139 (33%), Positives = 78/139 (56%)

Query:    24 VATSSLS-ANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEG 82
             VA  S+S A S+  + Y+IL +   P+G+ PKG+ ++  D ETG+F  YL+  C    E 
Sbjct:    16 VAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYET 75

Query:    83 SYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNI----VEVTRNGDDIDFSVGIASAS 138
               ++ Y + I+G I   +++ L+G+S + LFLW  +    V+V  +G  I F VG+    
Sbjct:    76 --EIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGL-IYFDVGVVRKQ 132

Query:   139 FAIDNFYECPQCGCGLDCV 157
             +++ + +E P+     DCV
Sbjct:   133 YSL-SLFETPR-----DCV 145

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2147610 AT5G19860 "AT5G19860" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 43/130 (33%), Positives = 66/130 (50%)

Query:    26 TSSLSA-NSDQLSA-YDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGS 83
             T SL+  + D +S  Y++L  Y  P+GLLP  +T + +  + G+F  +L  +C   +E  
Sbjct:    22 THSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLS-DDGRFVVHLPNSCE--IEFD 78

Query:    84 YQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNIVEVTRN---GDDIDFSVGIASASFA 140
             Y + Y   ISG I    +T L G+ VK  F+WL++ E+  +    D I F VG  +    
Sbjct:    79 YLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLD 138

Query:   141 IDNFYECPQC 150
             ID F     C
Sbjct:   139 IDQFKTIHSC 148

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2183134 AT5G19590 "AT5G19590" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 36/114 (31%), Positives = 62/114 (54%)

Query:    38 AYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLE-GSYQLKYKSKISGYI 96
             A+  L ++ FP GLLP  +  Y +++ +G F  +L+G C  +L   +Y   Y +K++G I
Sbjct:    31 AHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTGRI 90

Query:    97 SENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQC 150
             S+ K+  L G+ V+  F   +I  +  +GD++ F V   +A +   NF E   C
Sbjct:    91 SQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:2079701 AT3G07460 "AT3G07460" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 43/141 (30%), Positives = 78/141 (55%)

Query:    22 SAVATSSLSANSDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLE 81
             + ++ S++ A ++ +   +IL +   P GL PKG+  + ++ ETG+F  YL+ +C    E
Sbjct:    16 AGISISAVIAENESID--EILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYE 73

Query:    82 GSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWLNI----VEVTRNGDDIDFSVGIASA 137
                +L Y   +SG I   ++  L+G+S + LFLWL +    V+V  +G  I F VG+   
Sbjct:    74 T--ELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL-IFFDVGVLRK 130

Query:   138 SFAIDNFYECPQCGCGLDCVS 158
              +++ + +E P+     DCV+
Sbjct:   131 QYSL-SLFETPR-----DCVA 145

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2166178 AT5G37070 "AT5G37070" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 29/116 (25%), Positives = 62/116 (53%)

Query:    40 DILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISEN 99
             ++L+ +  P G+ P+  T Y+ + ETG+   ++  TC      S  L++ + ++GY+ + 
Sbjct:    56 ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKG 115

Query:   100 KLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLD 155
             KL  + G+  KV+ +W+ +  ++ +   + F+ GI  +     + YE  + G G+D
Sbjct:   116 KLAEVEGMKTKVM-IWVKVTCISADSSKVYFTAGIKKSRSR--DAYEVIRPGVGVD 168

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028027001 SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (162 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	173
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	1e-50

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score =  157 bits (400), Expect = 1e-50
 Identities = 56/109 (51%), Positives = 79/109 (72%), Gaps = 2/109 (1%)

Query: 37  SAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYI 96
           +AY++L+ Y  P GLLPKG+T+Y +D  TG+F  YL+GTC F+ EG Y ++Y   ++GYI
Sbjct: 1   TAYELLEEYGLPVGLLPKGVTEYTLDETTGKFWVYLNGTCEFTFEG-YSVRYDPTVTGYI 59

Query: 97  SENKLTSLTGVSVKVLFLWLNIVEVTR-NGDDIDFSVGIASASFAIDNF 144
           S+ +L+ L GV VKVLFLW+ IVE++  +GD + FSVG+ S SF  D F
Sbjct: 60  SKGRLSGLEGVKVKVLFLWVPIVEISVDDGDKLTFSVGVLSKSFPADAF 108

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	173
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=4.5e-47  Score=289.38  Aligned_cols=110  Identities=45%  Similarity=0.901  Sum_probs=84.6

Q ss_pred             hHHHHHHhcCCCCCCCCCCceeEEEeCCCCeEEEEecCeeEEEEecceEEEEeeEEEEEEecCceecccceeEEEEEEee
Q 030668           37 SAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVLFLWL  116 (173)
Q Consensus        37 tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~~~~~~~v~Y~~~ItG~i~~g~I~~L~GVk~K~lf~Wv  116 (173)
                      ||||+|++||||+||||++|++|+||++||+|||+|+++|+|+++ +|+|+|+++|||+|++|+|++|+|||+|++|+|+
T Consensus         1 tayelL~~~glP~GLLP~~v~~y~l~~~tG~f~v~l~~~C~~~~~-~~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~W~   79 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLPLGVTEYGLNRDTGFFWVKLKSPCEFRFE-GYLVSYDSEITGYIEKGKIKNLTGVKVKELFLWV   79 (110)
T ss_dssp             --HHHHHHHS-TT-TTTSSS-EEEE-TTT-SEEEE-SS-EEEEST-TSEEEE-SEEEEEE-SS-EEEEES-EEE-SSSEE
T ss_pred             CHHHhHHHcCCCCCcCCCCceEEEEecCCcEEEEEecCCEEEEEE-EEEEEEcCeEEEEECCCcCccccCEEEEEEEEEe
Confidence            689999999999999999999999999999999999999999998 5999999999999999999999999999999999


Q ss_pred             eeeEEEEcCCeEEEEEceeeeeeeccccccC
Q 030668          117 NIVEVTRNGDDIDFSVGIASASFAIDNFYEC  147 (173)
Q Consensus       117 ~I~eI~~d~~~I~F~vG~~sksFP~s~F~~s  147 (173)
                      +|+||.+++|+|+|++|+++++||+++|++|
T Consensus        80 ~v~~i~~~~~~i~F~~g~~s~sfp~~~F~~s  110 (110)
T PF04398_consen   80 PVTEISVDGDKIYFKVGGISKSFPVSAFEES  110 (110)
T ss_dssp             S---BEE-SSSEE-TTSSSS----TTTTSS-
T ss_pred             eEEEEEEcCCEEEEEEeeEeccCCHHHhccC
Confidence            9999999999999999999999999999986

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	173
1ydu_A	170	Solution Nmr Structure Of At5g01610, An Arabidopsis		5e-10

>pdb|1YDU|A Chain A, Solution Nmr Structure Of At5g01610, An Arabidopsis Thaliana Protein Containing Duf538 Domain Length = 170

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 40  DILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISEN 99
           ++L+ Y+ P G+ P   T Y+ D ET +    +   C    + S  LK+ + ++G++ + 
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115
Query: 100 KLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASA 137
           KLT + G+  KV+ +W+ +  ++ +   + F+ G+  +
Sbjct: 116 KLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGMKKS 152

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	173
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	3e-48

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score =  153 bits (388), Expect = 3e-48
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 35  QLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISG 94
           Q    ++L+ Y+ P G+ P   T Y+ D ET +    +   C    + S  LK+ + ++G
Sbjct: 51  QKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTG 110

Query: 95  YISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGL 154
           ++ + KLT + G+  KV  +W+ +  ++ +   + F+ G+   S + D +    + G  +
Sbjct: 111 HLEKGKLTDVEGIKTKV-MIWVKVTSISTDASKVYFTAGMKK-SRSRDAY-GVQRNGLRV 167

Query: 155 D 155
           D
Sbjct: 168 D 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	173
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=2.5e-45  Score=297.06  Aligned_cols=118  Identities=23%  Similarity=0.503  Sum_probs=114.2

Q ss_pred             CCcchHHHHHHhcCCCCCCCCCCceeEEEeCCCCeEEEEecCeeEEEEecceEEEEeeEEEEEEecCceecccceeEEEE
Q 030668           33 SDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVL  112 (173)
Q Consensus        33 ~~~~tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~~~~~~~v~Y~~~ItG~i~~g~I~~L~GVk~K~l  112 (173)
                      .+++++||+|++||||+||||++|++|+||++||+|||+|+++|+|+++++|+|+|+++|||+|++|+|++|+||++|+|
T Consensus        49 ~~~~ta~elL~e~gLP~GLLP~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~~~~v~Y~~~VtG~l~~GkI~~L~GVk~K~L  128 (170)
T 1ydu_A           49 KMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVM  128 (170)
T ss_dssp             TTTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEESS
T ss_pred             cccccHHHHHHHcCCCCCcCCCCCeEEEEECCCcEEEEEeCCCEEEEecCccEEEEcCEEEEEEcCCcCccccCEEEEEE
Confidence            56789999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             EEeeeeeEEEEcCCeEEEEEceeeeeeeccccccCCCCCC
Q 030668          113 FLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGC  152 (173)
Q Consensus       113 f~Wv~I~eI~~d~~~I~F~vG~~sksFP~s~F~~sP~C~~  152 (173)
                       +|++|+||.+++|+|+|++| ++++||+++|+.+|.|..
T Consensus       129 -lWv~V~eI~v~~~kI~F~vG-i~ksfp~saFe~~~~c~~  166 (170)
T 1ydu_A          129 -IWVKVTSISTDASKVYFTAG-MKKSRSRDAYGVQRNGLR  166 (170)
T ss_dssp             -SEESCCCBEECSSSEECTTS-SSSCCCHHHHSSCCCCCC
T ss_pred             -EEeeEEEEEEeCCEEEEEEc-CcccccHHHhcCCcCCcc
Confidence             99999999999999999998 589999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	173
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	9e-48

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  151 bits (382), Expect = 9e-48
 Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 35  QLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISG 94
           Q    ++L+ Y+ P G+ P   T Y+ D ET +    +   C    + S  LK+ + ++G
Sbjct: 50  QKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTG 109

Query: 95  YISENKLTSLTGVSVKVLFLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGL 154
           ++ + KLT + G+  K + +W+ +  ++ +   + F+ G+   S + D +    + G  +
Sbjct: 110 HLEKGKLTDVEGIKTK-VMIWVKVTSISTDASKVYFTAGMKK-SRSRDAY-GVQRNGLRV 166

Query: 155 D 155
           D
Sbjct: 167 D 167

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	173
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-44  Score=291.09  Aligned_cols=120  Identities=23%  Similarity=0.545  Sum_probs=112.1

Q ss_pred             CCcchHHHHHHhcCCCCCCCCCCceeEEEeCCCCeEEEEecCeeEEEEecceEEEEeeEEEEEEecCceecccceeEEEE
Q 030668           33 SDQLSAYDILQSYNFPAGLLPKGITQYDIDRETGQFHAYLDGTCSFSLEGSYQLKYKSKISGYISENKLTSLTGVSVKVL  112 (173)
Q Consensus        33 ~~~~tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~~~~~~~v~Y~~~ItG~i~~g~I~~L~GVk~K~l  112 (173)
                      -.+.+++|+|++||||+||||++|++|+||++||+|||+|+++|+|+++++|+|+|+++|||+|++|+|++|+|||+| +
T Consensus        48 k~~k~l~ELL~eygLP~GLLP~~V~~Y~l~~~TG~f~V~l~~~C~~~f~~sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-l  126 (169)
T d1ydua1          48 KMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK-V  126 (169)
T ss_dssp             TTTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEE-S
T ss_pred             CCCCCHHHHHHhcCCCCccCCCCceEEEEECCCcEEEEEeCCCEEEEecCceEEEEcCEEEEEEcCCcCccccceEEE-E
Confidence            456789999999999999999999999999999999999999999999888999999999999999999999999999 7


Q ss_pred             EEeeeeeEEEEcCCeEEEEEceeeeeeeccccccCCCCCCCCC
Q 030668          113 FLWLNIVEVTRNGDDIDFSVGIASASFAIDNFYECPQCGCGLD  155 (173)
Q Consensus       113 f~Wv~I~eI~~d~~~I~F~vG~~sksFP~s~F~~sP~C~~g~~  155 (173)
                      |+|++|+||.+|+|+|+|++| ++|+||+++||. |+|+++.+
T Consensus       127 flWv~V~eI~vd~~kI~F~vG-I~KsfP~daFE~-prdg~~vd  167 (169)
T d1ydua1         127 MIWVKVTSISTDASKVYFTAG-MKKSRSRDAYGV-QRNGLRVD  167 (169)
T ss_dssp             SSEESCCCBEECSSSEECTTS-SSSCCCHHHHSS-CCCCCCTT
T ss_pred             EEEEEEEEEEEcCCeEEEEec-ccccCCHHHccC-Cccceeec
Confidence            899999999999999999999 789999999966 56665544