Citrus Sinensis ID: 030694
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 173 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZRF1 | 359 | Probable mannitol dehydro | N/A | no | 0.895 | 0.431 | 0.825 | 3e-61 | |
| Q6V4H0 | 360 | 8-hydroxygeraniol dehydro | N/A | no | 0.895 | 0.430 | 0.754 | 1e-55 | |
| P42754 | 337 | Mannitol dehydrogenase (F | N/A | no | 0.895 | 0.459 | 0.748 | 2e-55 | |
| P93257 | 361 | Probable mannitol dehydro | N/A | no | 0.895 | 0.429 | 0.735 | 1e-52 | |
| Q2KNL6 | 360 | Geraniol dehydrogenase 1 | N/A | no | 0.895 | 0.430 | 0.696 | 1e-52 | |
| Q02971 | 357 | Cinnamyl alcohol dehydrog | yes | no | 0.895 | 0.434 | 0.729 | 2e-51 | |
| Q38707 | 365 | Mannitol dehydrogenase OS | N/A | no | 0.895 | 0.424 | 0.664 | 1e-49 | |
| Q02972 | 359 | Cinnamyl alcohol dehydrog | no | no | 0.872 | 0.420 | 0.741 | 5e-49 | |
| P42734 | 360 | Probable cinnamyl alcohol | no | no | 0.895 | 0.430 | 0.645 | 1e-47 | |
| O65621 | 363 | Probable cinnamyl alcohol | no | no | 0.895 | 0.426 | 0.619 | 7e-46 |
| >sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 234 bits (596), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 141/155 (90%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHF+VRIP+ PLD APLLCAGIT YSPLR++GLDKPGMHVGVVGLGGLGHVAVK
Sbjct: 140 MVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVK 199
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQAA+GTMDGIIDTVSA HPL
Sbjct: 200 FAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPL 259
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLIGLL S GKLV++GAPEKPLELP FPLL G +
Sbjct: 260 LPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRK 294
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Fragaria ananassa (taxid: 3747) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5EC: 5 |
| >sp|Q6V4H0|10HGO_CATRO 8-hydroxygeraniol dehydrogenase OS=Catharanthus roseus GN=10HGO PE=1 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 137/155 (88%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHFV+R PE P+D APLLCAGIT YSPLR++GLDKPG HVGVVGLGGLGHVAVK
Sbjct: 142 MVADEHFVIRWPENLPMDIGAPLLCAGITTYSPLRYFGLDKPGTHVGVVGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTVISTS SKK EA+E+LGADSFLVSRD ++M+AA ++DGIIDTVSA+HP+
Sbjct: 202 FAKAFGAKVTVISTSESKKQEALEKLGADSFLVSRDPEQMKAAAASLDGIIDTVSAIHPI 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
MPL+ +LKS GKL+L+GAPEKPLELP+FPL+ G +
Sbjct: 262 MPLLSILKSHGKLILVGAPEKPLELPSFPLIAGRK 296
|
Dehydrogenase involved in the biosynthesis of oxogeranial from hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Catharanthus roseus (taxid: 4058) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 2 EC: 4 |
| >sp|P42754|MTDH_PETCR Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 132/155 (85%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVAD+HFV+R PE PLD+ APLLCAGIT YSPLR++GLDKPG VGVVGLGGLGHVAVK
Sbjct: 119 MVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVK 178
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKA G VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP+
Sbjct: 179 MAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPV 238
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+GLLK GKLV++GAPEKPLELP FPLL G +
Sbjct: 239 VPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRK 273
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Petroselinum crispum (taxid: 4043) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|P93257|MTDH_MESCR Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/155 (73%), Positives = 137/155 (88%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV +EHF VRIP+ LDATAPLLCAG+TVYSPL+ + LDKPG+H+GVVGLGGLGH+AVK
Sbjct: 143 MVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
F KA G KVTVISTSP+KK EAV RLGADSF+VSR+ ++MQ+AMGT+DGIIDTVSA HPL
Sbjct: 203 FGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPL 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+GLLKSQGK++++G P+KPLELP FPLL G +
Sbjct: 263 LPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRK 297
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Mesembryanthemum crystallinum (taxid: 3544) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q2KNL6|GEDH1_OCIBA Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 129/155 (83%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHF++R PE PLDA APLLCAGIT YSPL+++GLDKPG+ VGV GLGGLGHVAVK
Sbjct: 142 MVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTVISTS SKK EA++ LG D F+VS D +MQAA+GT+DGIIDTVSA HP+
Sbjct: 202 FAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPI 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+ LLK GKL+++G P+KPL+LP FPL+ G
Sbjct: 262 VPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRR 296
|
Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol and nerol in equal efficiency. Also active, although at a lower efficiency, with cinnamyl alcohol. Ocimum basilicum (taxid: 39350) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 3 |
| >sp|Q02971|CADH7_ARATH Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 135/155 (87%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV E F++RIP+ PLD APLLCAG+TVYSP++++GLDKPGMH+GVVGLGGLGHVAVK
Sbjct: 138 MVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVK 197
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTS K+ EAV RLGAD+FLVSRD +M+ AMGTMDGIIDTVSA HPL
Sbjct: 198 FAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPL 257
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+GLLK++GKLV++GAP +PLELP FPL+ G +
Sbjct: 258 LPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRK 292
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|Q38707|MTDH_APIGR Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/155 (66%), Positives = 124/155 (80%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHF++R P+ PLD+ APLLCAGIT YSPL++YGLDKPG +GVVGLGGLGHVAVK
Sbjct: 142 MVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKA G +VTVI S SK+ EA+E+LGADSFL++ DQ++M+ A ++DGIIDTV HPL
Sbjct: 202 MAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PL LLK GKLV++GAPEKP ELP F LL G +
Sbjct: 262 APLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRK 296
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Apium graveolens (taxid: 4045) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q02972|CADH8_ARATH Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 132/151 (87%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV +E FV+RIP+ PLDA APLLCAGITVYSP++++GLDKPGMH+GVVGLGGLGHV VK
Sbjct: 138 MVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVK 197
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTS K+ EA+ RLGAD+FLVSRD +++ AMGTMDGIIDTVSA H L
Sbjct: 198 FAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSL 257
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151
+PL+GLLK +GKLV++GAPEKPLELP PL+
Sbjct: 258 LPLLGLLKHKGKLVMVGAPEKPLELPVMPLI 288
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|P42734|CADH9_ARATH Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 123/155 (79%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V D+ FV+R PE P D+ APLLCAGITVYSP+++YG+ + G H+GV GLGGLGHVAVK
Sbjct: 142 IVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
KA G+KVTVIS+S +K EA+ LGADSFLV+ D +M+AA+GTMD IIDT+SAVH L
Sbjct: 202 IGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHAL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PL+GLLK GKL+ LG PEKPLELP FPL+ G +
Sbjct: 262 YPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRK 296
|
Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|O65621|CADH6_ARATH Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 123/155 (79%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V DE + V+IP PL + APLLCAGI++YSP++++GL P HVG+VGLGGLGH+ V+
Sbjct: 143 IVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVR 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTV+S++ K +A++ LGAD FLVS D+D+M+AAMGTMDGIIDTVSA H +
Sbjct: 203 FAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSI 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PLIGLLKS GKLVLLGA EKP ++ AF L+ G +
Sbjct: 263 SPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRK 297
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 173 | ||||||
| 356560957 | 344 | PREDICTED: probable mannitol dehydrogena | 0.890 | 0.447 | 0.772 | 1e-65 | |
| 118489566 | 362 | unknown [Populus trichocarpa x Populus d | 0.895 | 0.428 | 0.845 | 4e-65 | |
| 224138226 | 362 | cinnamyl alcohol dehydrogenase-like prot | 0.895 | 0.428 | 0.845 | 4e-65 | |
| 255587478 | 359 | alcohol dehydrogenase, putative [Ricinus | 0.895 | 0.431 | 0.825 | 7e-64 | |
| 255587709 | 362 | alcohol dehydrogenase, putative [Ricinus | 0.895 | 0.428 | 0.838 | 8e-64 | |
| 224104051 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.895 | 0.430 | 0.851 | 2e-62 | |
| 307634614 | 360 | cinnamyl alcohol dehydrogenase [Salvia m | 0.895 | 0.430 | 0.8 | 3e-62 | |
| 224104043 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.895 | 0.430 | 0.838 | 6e-62 | |
| 224144875 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.895 | 0.430 | 0.838 | 7e-62 | |
| 356496810 | 359 | PREDICTED: probable mannitol dehydrogena | 0.895 | 0.431 | 0.838 | 7e-61 |
| >gi|356560957|ref|XP_003548752.1| PREDICTED: probable mannitol dehydrogenase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/154 (77%), Positives = 137/154 (88%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHFV+RIP+ LDATAPL+CAGITVYSPLR+YGLDKP +HVGVVGL GLGH+AVK
Sbjct: 127 MVADEHFVIRIPDSLALDATAPLICAGITVYSPLRYYGLDKPDLHVGVVGLSGLGHMAVK 186
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KV VISTSPSKK EA++ LGADSFL++RDQD+MQ MG +DGIIDTVSAVHPL
Sbjct: 187 FAKAFGAKVIVISTSPSKKDEAIQHLGADSFLLNRDQDQMQGTMGALDGIIDTVSAVHPL 246
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
+PLIGLLKS GK+V++ APE+PLELP FPLL G+
Sbjct: 247 LPLIGLLKSHGKIVMVDAPERPLELPVFPLLAGK 280
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489566|gb|ABK96585.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 145/155 (93%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHF+VRIP PLDA APLLCAGITVYSPLR++GLDKPGMHVG+VGLGGLGHVAVK
Sbjct: 143 MVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDKPGMHVGIVGLGGLGHVAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQAAMGT+DGIIDTVSAVHPL
Sbjct: 203 FARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQAAMGTLDGIIDTVSAVHPL 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+ LLKS GKLVL+GAPEKPLELP FPL+TG +
Sbjct: 263 LPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRK 297
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138226|ref|XP_002322761.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222867391|gb|EEF04522.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 145/155 (93%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHF+VRIP PLDA APLLCAGITVYSPLR++GLDKPGMHVG+VGLGGLGHVAVK
Sbjct: 143 MVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDKPGMHVGIVGLGGLGHVAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQAAMGT+DGIIDTVSAVHPL
Sbjct: 203 FARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQAAMGTLDGIIDTVSAVHPL 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+ LLKS GKLVL+GAPEKPLELP FPL+TG +
Sbjct: 263 LPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRK 297
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255587478|ref|XP_002534286.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525574|gb|EEF28097.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 143/155 (92%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVA+EHFVVRIP+ PLDATAPLLCAGITVYSPL++YGLDKPG + VVGLGGLGH+AVK
Sbjct: 140 MVANEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPGTQLAVVGLGGLGHMAVK 199
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTSP+KK EA+ERLGADSFLV+RDQD+M+ AMGTMDGIIDTVSA+H L
Sbjct: 200 FAKAMGAKVTVISTSPNKKQEAIERLGADSFLVTRDQDQMKGAMGTMDGIIDTVSAMHLL 259
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLIGLLKS GKLVL+GAPEKPLELPAFPLL G +
Sbjct: 260 LPLIGLLKSHGKLVLVGAPEKPLELPAFPLLAGRK 294
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255587709|ref|XP_002534367.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525426|gb|EEF28018.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 145/155 (93%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV+DEHFVVRIP+ PLDATAPLLCAGITVYSPL++YGLDKPGM +GVVGLGGLGH+AVK
Sbjct: 143 MVSDEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPGMQLGVVGLGGLGHMAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTSP+KK EA+ERLGADSFLVSRDQD+M+ A+GTMDGIIDTVSA+HPL
Sbjct: 203 FAKAMGAKVTVISTSPNKKQEAIERLGADSFLVSRDQDQMKGAIGTMDGIIDTVSAMHPL 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PLIGLLKS GKLVL+GAPEKPLELPAFPL+ G +
Sbjct: 263 SPLIGLLKSDGKLVLVGAPEKPLELPAFPLIGGRK 297
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104051|ref|XP_002313297.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849705|gb|EEE87252.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/155 (85%), Positives = 143/155 (92%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV DEHFVVRIP+ PLDA APLLCAGITVYSPLRF+ LDKPGMHVGVVGLGGLGHVAVK
Sbjct: 143 MVTDEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGMHVGVVGLGGLGHVAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAAMGTMDG+IDTVSA+HP+
Sbjct: 203 FAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAMGTMDGVIDTVSAIHPI 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLI LLK+QGKLVL+GAPEKPLELP FPL+ G +
Sbjct: 263 LPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307634614|gb|ADN78309.1| cinnamyl alcohol dehydrogenase [Salvia miltiorrhiza] | Back alignment and taxonomy information |
|---|
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/155 (80%), Positives = 140/155 (90%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVA+EHF+VRIP+ PLD+ APLLCAGIT YSP+R++GLDKPGMH+GVVGLGGLGHVAVK
Sbjct: 142 MVAEEHFIVRIPDNMPLDSAAPLLCAGITTYSPMRYFGLDKPGMHIGVVGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTVISTSP+KK EA+ LGADSFL+S+D DEMQAAMGTMDGIIDTVSA HPL
Sbjct: 202 FAKAFGSKVTVISTSPNKKDEALSNLGADSFLISKDADEMQAAMGTMDGIIDTVSAYHPL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
MPLIGLLK+ GKLV+LGAP+KPLELP FPLL G +
Sbjct: 262 MPLIGLLKAHGKLVMLGAPDKPLELPVFPLLAGRK 296
|
Source: Salvia miltiorrhiza Species: Salvia miltiorrhiza Genus: Salvia Family: Lamiaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104043|ref|XP_002313294.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849702|gb|EEE87249.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 143/155 (92%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV DEHFV+RIP+ PLDA APLLCAGITVYSPLRF+ LDKPGMHVGVVGLGGLGHVAVK
Sbjct: 143 MVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGMHVGVVGLGGLGHVAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+GTMDG+IDTVSA+HP+
Sbjct: 203 FAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAVGTMDGVIDTVSAIHPI 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLI LLK+QGKLVL+GAPEKPLELP FPL+ G +
Sbjct: 263 LPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144875|ref|XP_002336182.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222831876|gb|EEE70353.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 143/155 (92%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV DEHFV+RIP+ PLDA APLLCAGITVYSPLRF+ LDKPGMHVGVVGLGGLGHVAVK
Sbjct: 143 MVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGMHVGVVGLGGLGHVAVK 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+GTMDG+IDTVSA+HP+
Sbjct: 203 FAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAVGTMDGVIDTVSAIHPI 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLI LLK+QGKLVL+GAPEKPLELP FPL+ G +
Sbjct: 263 LPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496810|ref|XP_003517258.1| PREDICTED: probable mannitol dehydrogenase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 144/155 (92%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADEHFVVRIP+ PLDA APLLCAGITVYSPLR+YGLDKPG+HVGVVGLGGLGH+AVK
Sbjct: 142 MVADEHFVVRIPDRLPLDAAAPLLCAGITVYSPLRYYGLDKPGLHVGVVGLGGLGHMAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTVISTSP+KK EA++ LGADSFL+SRDQD+MQAAMGT+DGIIDTVSAVHPL
Sbjct: 202 FAKAFGAKVTVISTSPNKKEEAIQNLGADSFLISRDQDQMQAAMGTLDGIIDTVSAVHPL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PLIGLLKS GKLV++GAPEKPLELP FPLL G +
Sbjct: 262 LPLIGLLKSHGKLVMVGAPEKPLELPVFPLLAGRK 296
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 173 | ||||||
| TAIR|locus:2005527 | 357 | ELI3-1 "elicitor-activated gen | 0.895 | 0.434 | 0.638 | 9.5e-50 | |
| TAIR|locus:2005528 | 359 | ELI3-2 "elicitor-activated gen | 0.872 | 0.420 | 0.655 | 4.1e-49 | |
| TAIR|locus:2136278 | 360 | CAD9 "cinnamyl alcohol dehydro | 0.895 | 0.430 | 0.561 | 5.2e-42 | |
| TAIR|locus:2120968 | 363 | CAD6 "cinnamyl alcohol dehydro | 0.895 | 0.426 | 0.541 | 2.6e-40 | |
| TAIR|locus:2052516 | 376 | CAD2 "cinnamyl alcohol dehydro | 0.895 | 0.412 | 0.544 | 6.1e-39 | |
| TAIR|locus:2052494 | 375 | CAD3 "cinnamyl alcohol dehydro | 0.895 | 0.413 | 0.544 | 9.9e-39 | |
| UNIPROTKB|Q0JA75 | 379 | CAD7 "Cinnamyl alcohol dehydro | 0.884 | 0.403 | 0.496 | 4e-35 | |
| UNIPROTKB|O24562 | 367 | CAD "Probable cinnamyl alcohol | 0.895 | 0.422 | 0.483 | 9.8e-32 | |
| TAIR|locus:2090704 | 365 | ATCAD4 [Arabidopsis thaliana ( | 0.867 | 0.410 | 0.476 | 1.1e-30 | |
| UNIPROTKB|Q6ZHS4 | 363 | CAD2 "Cinnamyl alcohol dehydro | 0.895 | 0.426 | 0.464 | 3e-30 |
| TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 99/155 (63%), Positives = 120/155 (77%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
MV E F++RIP+ PLD APLLCAG+TVYSP++++GLDKPGM K
Sbjct: 138 MVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVK 197
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTS K+ EAV RLGAD+FLVSRD +M+ AMGTMDGIIDTVSA HPL
Sbjct: 198 FAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPL 257
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+PL+GLLK++GKLV++GAP +PLELP FPL+ G +
Sbjct: 258 LPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRK 292
|
|
| TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 99/151 (65%), Positives = 118/151 (78%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
MV +E FV+RIP+ PLDA APLLCAGITVYSP++++GLDKPGM K
Sbjct: 138 MVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVK 197
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKAMG KVTVISTS K+ EA+ RLGAD+FLVSRD +++ AMGTMDGIIDTVSA H L
Sbjct: 198 FAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSL 257
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151
+PL+GLLK +GKLV++GAPEKPLELP PL+
Sbjct: 258 LPLLGLLKHKGKLVMVGAPEKPLELPVMPLI 288
|
|
| TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 87/155 (56%), Positives = 109/155 (70%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
+V D+ FV+R PE P D+ APLLCAGITVYSP+++YG+ + G K
Sbjct: 142 IVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
KA G+KVTVIS+S +K EA+ LGADSFLV+ D +M+AA+GTMD IIDT+SAVH L
Sbjct: 202 IGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHAL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PL+GLLK GKL+ LG PEKPLELP FPL+ G +
Sbjct: 262 YPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRK 296
|
|
| TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 84/155 (54%), Positives = 109/155 (70%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
+V DE + V+IP PL + APLLCAGI++YSP++++GL P +
Sbjct: 143 IVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVR 202
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTV+S++ K +A++ LGAD FLVS D+D+M+AAMGTMDGIIDTVSA H +
Sbjct: 203 FAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSI 262
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PLIGLLKS GKLVLLGA EKP ++ AF L+ G +
Sbjct: 263 SPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRK 297
|
|
| TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 85/156 (54%), Positives = 106/156 (67%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXXXXXXXXXXX 59
+V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G
Sbjct: 137 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 196
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
K KA G++VTVIS S K+ EA++RLGADSFLV+ D +M+ A+GTMD IIDTVSA H
Sbjct: 197 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHA 256
Query: 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
L+PL LLK GKLV LG PEKPL+LP F L+ G +
Sbjct: 257 LLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRK 292
|
|
| TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 85/156 (54%), Positives = 106/156 (67%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXXXXXXXXXXX 59
+V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
K KA G++VTVIS S K+ EA++RLGADSFLV+ D +M+ A+GTMD IIDTVSA H
Sbjct: 196 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHA 255
Query: 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
L+PL LLK GKLV LG EKPL+LP FPL+ G +
Sbjct: 256 LLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRK 291
|
|
| UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 80/161 (49%), Positives = 106/161 (65%)
Query: 1 MVADEHFVVRIPEGA--------PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXX 52
+V + FVVR P A PLD+ APLLCAG+TVY+P+R +GL + G
Sbjct: 153 VVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLG 212
Query: 53 XXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 112
KFA+A G++VTVISTSP K+ EA+ERLGAD F+VS + EM+AAMGTM GII+
Sbjct: 213 GLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIIN 272
Query: 113 TVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
T SA + + LLK +GK++L+G PEKPL++P F L+ G
Sbjct: 273 TASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGG 313
|
|
| UNIPROTKB|O24562 CAD "Probable cinnamyl alcohol dehydrogenase" [Zea mays (taxid:4577)] | Back alignment and assigned GO terms |
|---|
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 75/155 (48%), Positives = 97/155 (62%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
MV D+ FVV+IP G + APLLCAG+TVYSPL+ +GL PG+ K
Sbjct: 139 MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVK 198
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKAMG VTVIS+S K++EA++ LGAD++LVS D M AA ++D IIDTV HPL
Sbjct: 199 VAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPL 258
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
P + LLK GKLVLLG +PL + ++ G +
Sbjct: 259 EPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRK 293
|
|
| TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 72/151 (47%), Positives = 92/151 (60%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
M+ ++ FVV+IPEG ++ APLLCAG+TVYSPL +GL G+ K
Sbjct: 140 MIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVK 199
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKAMG VTVIS+S KK EA+E LGAD ++VS D EMQ ++D IIDTV HPL
Sbjct: 200 IAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPL 259
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151
P + LK GKL+L+G PL+ PL+
Sbjct: 260 DPYLACLKLDGKLILMGVINTPLQFVT-PLV 289
|
|
| UNIPROTKB|Q6ZHS4 CAD2 "Cinnamyl alcohol dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 72/155 (46%), Positives = 96/155 (61%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 60
MV D+ FVV+IP G + APLLCAG+TVYSPL+ +GL PG+ K
Sbjct: 139 MVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVK 198
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AK+MG VTVIS+S K+ EA++ LGAD++LVS D M AA ++D IIDTV HPL
Sbjct: 199 VAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPL 258
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
P + LLK GKL+L+G +PL + ++ G +
Sbjct: 259 EPYLALLKLDGKLILMGVINQPLSFISPMVMLGRK 293
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q02971 | CADH7_ARATH | 1, ., 1, ., 1, ., 1, 9, 5 | 0.7290 | 0.8959 | 0.4341 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | CADL4 | cinnamyl alcohol dehydrogenase-like protein (362 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 173 | |||
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 3e-81 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 1e-80 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 3e-64 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 2e-58 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 8e-58 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 3e-48 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 2e-33 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 5e-28 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 2e-22 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 7e-22 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 5e-17 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 9e-17 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 3e-16 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 6e-16 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 6e-15 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 3e-14 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 1e-13 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 4e-13 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 1e-12 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 4e-12 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 7e-12 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 2e-11 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 5e-11 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 2e-10 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 4e-10 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 7e-10 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 9e-10 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 3e-09 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 9e-09 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 1e-08 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 1e-08 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 6e-08 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 9e-08 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 1e-07 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 1e-07 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 2e-07 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 3e-07 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 3e-07 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 3e-07 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 4e-07 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 5e-07 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 6e-07 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 9e-07 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 1e-06 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 4e-06 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 5e-06 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 6e-06 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 7e-06 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 1e-05 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 1e-05 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 1e-05 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 2e-05 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 2e-05 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 3e-05 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 3e-05 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 5e-05 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 5e-05 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 5e-05 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 6e-05 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 6e-05 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 1e-04 | |
| PRK13243 | 333 | PRK13243, PRK13243, glyoxylate reductase; Reviewed | 2e-04 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 2e-04 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 3e-04 | |
| cd05198 | 302 | cd05198, formate_dh_like, Formate/glycerate and re | 3e-04 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 3e-04 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 3e-04 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 4e-04 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 4e-04 | |
| COG0111 | 324 | COG0111, SerA, Phosphoglycerate dehydrogenase and | 4e-04 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 5e-04 | |
| cd12178 | 317 | cd12178, 2-Hacid_dh_13, Putative D-isomer specific | 7e-04 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 8e-04 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 0.001 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 0.001 | |
| PRK08410 | 311 | PRK08410, PRK08410, 2-hydroxyacid dehydrogenase; P | 0.002 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 0.002 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 0.002 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.002 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 0.003 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 0.003 | |
| COG1052 | 324 | COG1052, LdhA, Lactate dehydrogenase and related d | 0.003 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 0.004 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 0.004 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 3e-81
Identities = 106/155 (68%), Positives = 129/155 (83%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V D+HFV+R P+ PLDA APLLCAGITVYSP+++YG+ +PG H+GV GLGGLGHVAVK
Sbjct: 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVK 201
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
KA G+KVTVIS+S +K+ EA+ RLGADSFLVS D ++M+AA+GTMD IIDTVSAVH L
Sbjct: 202 IGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHAL 261
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
PL+GLLK GKL+ LG PEKPLELP FPL+ G +
Sbjct: 262 GPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRK 296
|
Length = 360 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 1e-80
Identities = 92/153 (60%), Positives = 114/153 (74%), Gaps = 2/153 (1%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V DE FV +IPEG A APLLCAGITVYSPL+ G+ PG VGVVG+GGLGH+AVK
Sbjct: 129 IVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV-GPGKRVGVVGIGGLGHLAVK 187
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA+G +VT S SPSKK +A +LGAD F+ ++D + M+ A G++D IIDTVSA H L
Sbjct: 188 FAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDL 246
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
P + LLK G LVL+GAPE+PL +P FPL+ G
Sbjct: 247 DPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFG 279
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 3e-64
Identities = 97/156 (62%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAV 59
+V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G +GV GLGGLGH+AV
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
K KA G++VTVIS S K+ EA++RLGADSFLV+ D +M+ A+GTMD IIDTVSA H
Sbjct: 196 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHA 255
Query: 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
L+PL LLK GKLV LG PEKPL+LP FPL+ G +
Sbjct: 256 LLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRK 291
|
Length = 375 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 2e-58
Identities = 84/153 (54%), Positives = 106/153 (69%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MV D+ FVV+IPEG + APLLCAG+TVYSPL +GL + G+ G++GLGG+GH+ VK
Sbjct: 139 MVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVK 198
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKAMG VTVIS+S K+ EA+E LGAD +LVS D EMQ A ++D IIDTV HPL
Sbjct: 199 IAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPL 258
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
P + LLK GKL+L+G PL+ L+ G
Sbjct: 259 EPYLSLLKLDGKLILMGVINTPLQFVTPMLMLG 291
|
Length = 357 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 8e-58
Identities = 71/155 (45%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVAD + V +P+G PL APLLCAGITVYS LR G +PG V V+G+GGLGH+AV+
Sbjct: 122 MVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGP-RPGERVAVLGIGGLGHLAVQ 180
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
+A+AMG + I+ SP K+ A +LGAD + S + + QAA G D I+ TV +
Sbjct: 181 YARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAA 239
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELP-AFPLLTGE 154
+G L+ G++VL+G PE P P FPL+
Sbjct: 240 EAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKR 274
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 158 bits (403), Expect = 3e-48
Identities = 72/156 (46%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V +VV+IPEG L APLLCAGIT Y L+ + KPG V VVG GGLGH+AV+
Sbjct: 126 VVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGGLGHMAVQ 184
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
+AKAMG +V I+ S K E ++LGAD + S D D ++A D IIDTV L
Sbjct: 185 YAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEAVKEIADAIIDTVGP-ATL 242
Query: 121 MPLIGLLKSQGKLVLLGAP--EKPLELPAFPLLTGE 154
P + L+ G LVL+G P LPAF L+ E
Sbjct: 243 EPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKE 278
|
Length = 339 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-33
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 1 MVADEHFVVRIPEGAPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 58
M+A + RIP+ LDA APLLCAG+T ++ LR G KPG V V G+GGLGH+A
Sbjct: 123 MLAPAEALARIPDD--LDAAEAAPLLCAGVTTFNALRNSGA-KPGDLVAVQGIGGLGHLA 179
Query: 59 VKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA--AMGTMDGIIDTVSA 116
V++A MG + IS K A + LGA ++ + +D +A +G I+ T
Sbjct: 180 VQYAAKMGFRTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPN 238
Query: 117 VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDSRD 172
+ L+G L +GKL++LGA +P+ + L+ G + W S G DS D
Sbjct: 239 AKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPS--GTALDSED 292
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 5e-28
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAV 59
+AD +V IP+G + APLLCAG+TVY L+ GL KPG V + G GG LGH+ V
Sbjct: 125 AIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGL-KPGDWVVISGAGGGLGHLGV 183
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTM--DGIIDTV 114
++AKAMG++V I K E + LGAD+F+ + D ++ G ++ T
Sbjct: 184 QYAKAMGLRVIAIDVGDEKL-ELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTA 242
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF 148
+ + L+ G LV +G P + L F
Sbjct: 243 VSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPF 277
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 2e-22
Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVADE F IPE + APLLCAGI Y L+ GL KPG +G+ G G H+A++
Sbjct: 127 MVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGL-KPGQRLGLYGFGASAHLALQ 185
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
A+ G +V + S + A E LGAD S D +D I +
Sbjct: 186 IARYQGAEVFAFTRSGEHQELARE-LGADWAGDSDDLPP-----EPLDAAIIFAPVGALV 239
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFP--LLTGEEEDSWWQSHWGVEGDSRDD 173
+ +K G++VL G +PAF LL GE ++ V +R D
Sbjct: 240 PAALRAVKKGGRVVLAGIHMSD--IPAFDYELLWGE------KTIRSVANLTRQD 286
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 7e-22
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V +V +P+G L+ A L T Y LR G+ KPG V V+G GG+G +A +
Sbjct: 93 VVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQ 152
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSA 116
AKA G +V V S K E + LGAD + +++D + T D +ID V
Sbjct: 153 LAKAAGARVIVTDRSDEKL-ELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGG 211
Query: 117 VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151
L + LL+ G++V++G L L
Sbjct: 212 PETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRL 246
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 5e-17
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVK 60
V V P++A APL AG+T Y ++ PG V V+G+GGLGH+AV+
Sbjct: 127 VPSRRLVKLPRGLDPVEA-APLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQ 185
Query: 61 FAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV 114
+A+ V + S A ERLGAD L + D D ++ G +ID V
Sbjct: 186 ILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASD-DVVEEVRELTGGRGADAVIDFV 243
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
+ L LL G+ V++G LP L+ E
Sbjct: 244 GSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTE 282
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 9e-17
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
V + P + A L AG+T + L G K G V + G GG+G AV+
Sbjct: 104 VVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQ 163
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD-EMQAAMGTMDGIIDTVSAVHP 119
AKA G + VI+T+ + ++ + LGAD + D E AA G +D ++DTV
Sbjct: 164 LAKARGAR--VIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG-ET 220
Query: 120 LMPLIGLLKSQGKLV 134
L + L+K G+LV
Sbjct: 221 LARSLALVKPGGRLV 235
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-16
Identities = 47/158 (29%), Positives = 63/158 (39%), Gaps = 19/158 (12%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
V +V +P+G P A A +T Y + G KPG V V+GLGGLG AV+
Sbjct: 125 VVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQI 184
Query: 62 AKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTV------- 114
AKAMG V + K A E LGAD L S D + G D +
Sbjct: 185 AKAMGAAVIAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQ 243
Query: 115 ----SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF 148
A +K G++V++G L +
Sbjct: 244 PTFEDAQK-------AVKPGGRIVVVGLGRDKLTVDLS 274
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 6e-16
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
V ++V P G A L C+G+T YS ++ V ++G GGLG +A+
Sbjct: 136 VPHSRYLV-DPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALAL 194
Query: 62 AKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSA 116
KA+G + V+ +K EA + GAD + D D ++AA G +D +ID V+
Sbjct: 195 LKALGPANIIVVDIDEAKL-EAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNN 253
Query: 117 VHPLMPLIGLLKSQGKLVLLG--APEKPLELPAFPL 150
+L GKLVL+G E L LP PL
Sbjct: 254 SATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPL 289
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 6e-15
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAV 59
+V ++V +P+G + A L AG+T + L KPG V V G GG+G A+
Sbjct: 101 VVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI 160
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTV 114
+ AKA+G V V S S+K E ++ LGAD + R++D ++ D ++DTV
Sbjct: 161 QLAKALGATV-VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTV 219
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA 147
+ L G+LV +GA +P
Sbjct: 220 GG-DTFAASLAALAPGGRLVSIGALSGGPPVPL 251
|
Length = 326 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-14
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
E +V++P+ ++ A C T L+ G+ K G V V G GG+G A++
Sbjct: 123 KVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGV-KKGDTVLVTGAGGGVGIHAIQ 181
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKA+G +V ++ SP K + ++ LGAD + E +G D +I+ V + +
Sbjct: 182 LAKALGARVIAVTRSPEKL-KILKELGADYVIDGSKFSEDVKKLGGADVVIELVGS-PTI 239
Query: 121 MPLIGLLKSQGKLVLLG 137
+ L G+LVL+G
Sbjct: 240 EESLRSLNKGGRLVLIG 256
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 1e-13
Identities = 50/143 (34%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVK 60
VA E + + PEG + A L AG+T LR G KPG V + G GG+G AV+
Sbjct: 103 VAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQ 162
Query: 61 FAKAMGVKVTVI-STSPSKKSEAVERLGADSFLVSRDQD--EMQAAMGTMDGIIDTVSAV 117
AKA+G VT + ST + +E V LGAD + +D + A D I D V
Sbjct: 163 IAKALGAHVTGVCST---RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNS 219
Query: 118 HP-LMPLIGLLKSQGKLVLLGAP 139
L LK G+ V +G
Sbjct: 220 PFSLYRASLALKPGGRYVSVGGG 242
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 4e-13
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V E +V+I APL+ L C T + +PG V V GLGG+G A++
Sbjct: 144 TVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQ 203
Query: 61 FAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTV 114
AKA G ++ + +P K A ++ GA F+ ++ D++ A+ G D + V
Sbjct: 204 GAKAAGAGRIIAVDINPEKLELA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECV 262
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTG 153
V + + G V++G + + F L+TG
Sbjct: 263 GNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303
|
Length = 366 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-12
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 53 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTM-- 107
G+G AV+ AKA+G + +K E + LGAD + RD+D ++ G
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60
Query: 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLTGE 154
D +ID V A L + LL+ G++V++G P P+ P LL E
Sbjct: 61 DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKE 108
|
Length = 131 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 4e-12
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 2 VADEHFVVRIPEG-APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
AD + V++PEG P A++ + CAG+T Y ++ G+ KPG + + G GGLG++A++
Sbjct: 125 TAD--YAVKVPEGLDPAQASS-ITCAGVTTYKAIKVSGI-KPGQWIAIYGAGGLGNLALQ 180
Query: 61 FAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD----EMQAAMGTMDGIIDTVS 115
+AK KV + + K + A E +GAD + S+ + +Q G + T
Sbjct: 181 YAKNVFNAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAV 239
Query: 116 AVHPLMPLIGLLKSQGKLVLLGAPEKPLEL 145
A + +++ G++V +G P + ++L
Sbjct: 240 AKAAFNQAVDAVRAGGRVVAVGLPPESMDL 269
|
Length = 338 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 7e-12
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 2 VADEHFVVRIPEGAPLDATA--PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 59
V + + ++P+G +A A L ++ +PG V VVG G +G +A+
Sbjct: 129 VPADFNLAKLPDGIDEEAAALTEPLATAYHGHA---ERAAVRPGGTVVVVGAGPIGLLAI 185
Query: 60 KFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDT 113
AK +G V V+ SP + A E GAD + + D + G +I+
Sbjct: 186 ALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEA 245
Query: 114 VSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157
V + L + L+ G +V++G L+ +E
Sbjct: 246 VGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELT 289
|
Length = 350 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-11
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFA 62
+V++P + + C VY LR G+ K G V V G GG+G A++ A
Sbjct: 125 KVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGV-KKGETVLVTGAGGGVGIHAIQVA 183
Query: 63 KAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122
KA+G KV +++S SK + V + AD +V E +G D +I+TV L
Sbjct: 184 KALGAKVIAVTSSESKA-KIVSKY-ADYVIVGSKFSEEVKKIGGADIVIETV-GTPTLEE 240
Query: 123 LIGLLKSQGKLVLLG----APEKPLEL 145
+ L GK++ +G +P L L
Sbjct: 241 SLRSLNMGGKIIQIGNVDPSPTYSLRL 267
|
Length = 334 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 5e-11
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V + +PE +A L CAG T Y L+ +PG V V+G+GG+G A++
Sbjct: 146 AVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQ 205
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTM--DGIIDTVS 115
AKA G + +K + LGA + + +D ++ G D +++ +
Sbjct: 206 LAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265
Query: 116 AVHPLMPLIGLLKSQGKLVLLG 137
+ +++ G+ V++G
Sbjct: 266 KPETFKLALDVVRDGGRAVVVG 287
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 2e-10
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 17/159 (10%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG-----VVGLGGLGH 56
V D V+ +P+ + A L CAG+T Y L K + G G GG+G
Sbjct: 101 VVDARAVLPLPDSLSFEEAAALPCAGLTAYQALF----KKLRIEAGRTILITGGAGGVGS 156
Query: 57 VAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----II 111
AV+ AK G + VI+T + E V+ LGAD + D+D + G ++
Sbjct: 157 FAVQLAKRAG--LRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVL 214
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150
DTV L L G LV + P F
Sbjct: 215 DTVGGETAAA-LAPTLAFNGHLVCIQGRPDASPDPPFTR 252
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 4e-10
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
V E +VR P+ + A L CAG+T ++ L G KPG V V G GG+ A++F
Sbjct: 120 VLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQF 179
Query: 62 AKAMGVKVTVISTSPSKKSEAVERLGAD 89
AKA G +V + ++S +K E + LGAD
Sbjct: 180 AKAAGARV-IATSSSDEKLERAKALGAD 206
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 7e-10
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 59
+V V +P+G + A L T Y L +PG V V+G GG+G AV
Sbjct: 98 VVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV 157
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98
+ AKA+G +V ++S +K LGAD + RD D
Sbjct: 158 QLAKALGARVIAAASSE-EKLALARALGADHVIDYRDPD 195
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 9e-10
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
V +V +P+G + A L +T Y L K G V V G G +GH AV+
Sbjct: 104 VVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQ 163
Query: 61 FAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV 114
A+ G VI+T S ++ +E V + GAD+ R +D + G II+ +
Sbjct: 164 LARWAG--ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVL 221
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
+ V+ L + +L G++V+ G+ +P PL+ E
Sbjct: 222 ANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKE 260
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 3e-09
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG- 66
+VR+P+ P + AP CA TV + L G G V V G G LG AV AK G
Sbjct: 143 IVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGA 202
Query: 67 VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108
+V VI SP + E GAD+ + + + Q D
Sbjct: 203 RRVIVIDGSPERL-ELAREFGADATIDIDELPDPQRRAIVRD 243
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 9e-09
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 8 VVRIPEGAPLDATA---PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 63
+++IP+ + A P A V + + G V V+G G +G +A+++ K
Sbjct: 127 LIKIPDHVDYEEAAMIEPAAVALHAVRLAGI------TLGDTVVVIGAGTIGLLAIQWLK 180
Query: 64 AMGVK-VTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAV 117
+G K V + +K LGAD + +++D + +G +I+ +
Sbjct: 181 ILGAKRVIAVDID-DEKLAVARELGADDTINPKEEDV-EKVRELTEGRGADLVIEAAGSP 238
Query: 118 HPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150
+ + L + GK+VL+G P + L
Sbjct: 239 ATIEQALALARPGGKVVLVGIPYGDVTLSEEAF 271
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-08
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GLGGLGHVAV 59
V D + P + A L GIT + L + G V + G GG+GHVAV
Sbjct: 103 AVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAV 162
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGAD 89
+ AKA G + V +T+ S+K+ LGAD
Sbjct: 163 QLAKAAGAR--VYATASSEKAAFARSLGAD 190
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-08
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 9 VRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 68
VR+P+ A L C T + L KPG V V G GG+G AV A A+G +
Sbjct: 132 VRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGAR 191
Query: 69 VTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPL 123
V + K A E LGA + + + + +++ AA+ G +D +
Sbjct: 192 VIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNS 250
Query: 124 IGLLKSQGKLVLLGAPEKPLELPAFP 149
+ L+ +G+ V +G A P
Sbjct: 251 VASLRKRGRHVQVGLTLGEEAGVALP 276
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 6e-08
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAV 59
+V E + +IP+ + A L A +T Y L+ GL PG V V G G G AV
Sbjct: 122 IVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGL-GPGETVVVFGASGNTGIFAV 180
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
+ AK MG +V +S + + ++ GAD + D DE++ + + + D V ++
Sbjct: 181 QLAKMMGAEVIAVS-----RKDWLKEFGADEVV---DYDEVEEKVKEITKMADVV--INS 230
Query: 120 LMPLI-----GLLKSQGKLVLLGA 138
L +L G+LV G
Sbjct: 231 LGSSFWDLSLSVLGRGGRLVTFGT 254
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 9e-08
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLC-----AGITVYSPLRFYGLDKPGMHVGVVGLGGLG 55
V E VV++ + PL+ APL C AG V + L+ +PG + V G G +G
Sbjct: 145 AVVHERNVVKVDKDVPLELLAPLGCGIQTGAG-AVLNVLK----PRPGSSIAVFGAGAVG 199
Query: 56 HVAVKFAKAMGVK-VTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGT-MDGI 110
AV AK G + + S+ A E LGA + +++D ++ G +D
Sbjct: 200 LAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREITGGGVDYA 258
Query: 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAP--EKPLELPAFPLLTG 153
+DT + + L +G L L+GAP + L LL
Sbjct: 259 LDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVS 303
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-07
Identities = 34/140 (24%), Positives = 51/140 (36%), Gaps = 7/140 (5%)
Query: 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFA 62
D ++V +PEG L+ +T Y L G V + G GG+G ++ A
Sbjct: 101 DAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA 160
Query: 63 KAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD--EMQAAMGTMDGIIDTVSAVHPL 120
G V T+ + A+ LGA + + R +D G +D + D V
Sbjct: 161 LLAG--AEVYGTASERNHAALRELGA-TPIDYRTKDWLPAMLTPGGVDVVFDGVGGES-Y 216
Query: 121 MPLIGLLKSQGKLVLLGAPE 140
L G LV G
Sbjct: 217 EESYAALAPGGTLVCYGGNS 236
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 1e-07
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V E VV+I + PLD A L C T + +PG V V+G GG+G A++
Sbjct: 141 TVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQ 200
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTV 114
A+ G ++ + P K E R GA + + + D ++A DG + V
Sbjct: 201 GARIAGASRIIAVDPVPEKL-ELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV 259
Query: 115 SAVHPLMPLIGLLKSQGKLVLLG--APEKPLELPAFPLLTGE 154
+ + + + G V++G P + + LPA L E
Sbjct: 260 GRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSE 301
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-07
Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
V+ +PEG L A L TV+S L G K G V + G G+G A++
Sbjct: 99 AVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ 158
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 115
AKA G +V + S +K A E LGAD + R++D ++ G I+D V
Sbjct: 159 LAKAFGARVFTTAGSD-EKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVG 217
Query: 116 AVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLT 152
+ L I L G++V +G + EL PLL
Sbjct: 218 GSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLA 254
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-07
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 2 VADEHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLG 55
V + +V +P+G P + A L + G+ + G V VVGLG +G
Sbjct: 59 VVPANLLVPLPDGLPPERAALTALAATALN--------GVRDAEPRLGERVAVVGLGLVG 110
Query: 56 HVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTV 114
+A + AKA G V+ P + E E LG + V+ D + G D +I+
Sbjct: 111 LLAAQLAKAAGA-REVVGVDPDAARRELAEALGP-ADPVAADTADEIGGRG-ADVVIEAS 167
Query: 115 SAVHPLMPLIGLLKSQGKLVLLG 137
+ L + LL+ +G++VL+G
Sbjct: 168 GSPSALETALRLLRDRGRVVLVG 190
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 3e-07
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
V ++ +PEG L A L T + L G K G V + G G+G A++
Sbjct: 99 VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 115
AKA+G +V + S K EA LGAD + R +D + G I+D V
Sbjct: 159 LAKALGARVIATAGSEE-KLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVG 217
Query: 116 AVHPLMPLIGLLKSQGKLVLLG 137
+ L + L G+LVL+G
Sbjct: 218 GDY-LARNLRALAPDGRLVLIG 238
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-07
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 67
VV+I + PL+ A CA +T + +PG V VVGLGG+G A+ A A G
Sbjct: 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGA 216
Query: 68 -KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ----AAMGTMDGIIDTVSAVHPLMP 122
+V + + K + A E LGA + + + D + ++ G +D + +V L
Sbjct: 217 SQVVAVDLNEDKLALARE-LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALET 275
Query: 123 LIGLLKSQGKLVLLG--APEKPLELPAFPLLTGEE 155
+ + G V G PE L +PA L EE
Sbjct: 276 AYEITRRGGTTVTAGLPDPEARLSVPALS-LVAEE 309
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 4e-07
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 28/171 (16%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V DE++V +I APL+ L C T Y +PG V V GLG +G A+
Sbjct: 143 TVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIM 202
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQD----EMQAAM----------- 104
AK G ++ + + K +A + GA F+ +D D E+ M
Sbjct: 203 GAKIAGASRIIGVDINEDKFEKA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFEC 261
Query: 105 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTG 153
G D + + + + G V++G P L + F L+ G
Sbjct: 262 TGNADLMNEALESTK---------LGWGVSVVVGVPPGAELSIRPFQLILG 303
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 5e-07
Identities = 40/171 (23%), Positives = 59/171 (34%), Gaps = 27/171 (15%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
V E + +I APL+ + C T Y PG V GLGG+G +
Sbjct: 143 VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMG 202
Query: 62 AKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQD--------EMQA--------AM 104
KA G ++ + + K +A + LGA + RDQD EM +
Sbjct: 203 CKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVI 261
Query: 105 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
G+ D + + A G V++G P E P
Sbjct: 262 GSADTLKQALDATR---------LGGGTSVVVGVPPSGTEATLDPNDLLTG 303
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 6e-07
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 66
F R+P G APLLCAGI Y L L PG +G+ G GG H+ + A A G
Sbjct: 131 FAYRLPTGYDDVELAPLLCAGIIGYRALLRASL-PPGGRLGLYGFGGSAHLTAQVALAQG 189
Query: 67 VKVTVISTSPSKKSEAVERLGADS 90
V V++ + + A+ LGA S
Sbjct: 190 ATVHVMTRGAAARRLALA-LGAAS 212
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 9e-07
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
+V + V ++P+ PL+ A PL A + +R G KPG V+G G +G +
Sbjct: 133 VVVPAYHVHKLPDNVPLEEAALVEPLAVA----WHAVRRSGF-KPGDTALVLGAGPIGLL 187
Query: 58 AVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGII 111
+ KA G ++S S +++ E E LGA L + D + G +D
Sbjct: 188 TILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSF 246
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
D L I L+ +G V + EKP+ L+ E
Sbjct: 247 DCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKE 289
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-06
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 12/159 (7%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVK 60
+ VV++P+G A L +T Y L +PG V + +G A++
Sbjct: 104 LVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQ 163
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 115
A A G V + + K+ + LGA +V+ ++D + + G + D V
Sbjct: 164 IANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVG 222
Query: 116 AVHPLMP-LIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
P L L G LV+ GA E FPL
Sbjct: 223 G--PQFAKLADALAPGGTLVVYGAL--SGEPTPFPLKAA 257
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-06
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
VA + V+ IP+G + A + A +T + L+ +G K G V + G G+G A +
Sbjct: 100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQ 159
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100
A+ G T+I+TS +K + ++L A ++ R DE
Sbjct: 160 LAEKYGA-ATIITTSSEEKVDFCKKLAA--IILIRYPDEE 196
|
Length = 334 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 5e-06
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
V +P+G + A +T Y L G +PG V V GG+G A +
Sbjct: 98 NVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQ 157
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EM-QAAMGTMDGIIDTVSA 116
K + VTV+ T+ + K EA++ G + R QD E+ + + +D ++D
Sbjct: 158 LCKTVPN-VTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD---- 212
Query: 117 VHPLMP-----LIGLLKSQGKLVLLGA 138
L LLK G+LV+ GA
Sbjct: 213 --ALGGEDTRKSYDLLKPMGRLVVYGA 237
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 6e-06
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 8 VVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 64
V+++P+ + A PL C + R G+ KPG V V+G G +G + AKA
Sbjct: 133 VLKLPDNVSFEEAALVEPLAC----CINAQRKAGI-KPGDTVLVIGAGPIGLLHAMLAKA 187
Query: 65 MG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVH 118
G KV V + + A ++LGAD + + ++D ++ DG +I +
Sbjct: 188 SGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPE 246
Query: 119 PLMPLIGLLKSQGKLVLLGAPEK 141
+ L++ G+++ G K
Sbjct: 247 AQAQALELVRKGGRILFFGGLPK 269
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 7e-06
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 8/144 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAV 59
+VA ++ +P+ + A L +T + L Y PG V +G + +
Sbjct: 97 VVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLI 156
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTV 114
+ AK +G K + + E ++ LGAD + S +D Q +D V
Sbjct: 157 QLAKLLGFKTINVVRRDEQVEE-LKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAV 215
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGA 138
L L+ G LV G
Sbjct: 216 GGESAT-RLARSLRPGGTLVNYGL 238
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-05
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100
G V VVG G +G ++ AKA G +V V+ + E LGAD + D+D +
Sbjct: 158 TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERL-EFARELGADDTINVGDED-V 215
Query: 101 QAAMGTM------DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP 146
A + + D +ID + + L+ G++VL+G + P+ P
Sbjct: 216 AARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFP 267
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-05
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 48 VVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAVERLGADSFLVSRDQDEMQAAMG 105
V+G G +G +A + G +V V++ P K++ VE LGA S+ +G
Sbjct: 178 VLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVG 237
Query: 106 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153
D II+ + L G ++L G P E+ L
Sbjct: 238 EFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRD 287
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-05
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 3 ADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKF 61
A+ + V P AT P C+ T + L G+ G V V G GG+G V+
Sbjct: 141 AENAYPVNSPLSDVELATFP--CSYSTAENMLERAGV-GAGETVLVTGASGGVGSALVQL 197
Query: 62 AKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--HP 119
AK G V + + K EAV LGAD+ + RD + A +D V+ V P
Sbjct: 198 AKRRGAIVIAV-AGAA-KEEAVRALGADTV-ILRDAPLLADAKALGGEPVDVVADVVGGP 254
Query: 120 LMP-LIGLLKSQGKLVLLGA 138
L P L+ LL+ G+ V GA
Sbjct: 255 LFPDLLRLLRPGGRYVTAGA 274
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-05
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 43 GMHVGVVGLGGLG-HVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ 101
G V +VGLG +G +A + AKA G++V + S V+ + DE+
Sbjct: 134 GKTVLIVGLGDIGREIA-RRAKAFGMRVIGVRRSGRPAPPVVDEV--------YTPDELD 184
Query: 102 AAMGTMDGII 111
+ D ++
Sbjct: 185 ELLPEADYVV 194
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV 83
+ P G + G VG++GLG +G + KA G+KV P ++EA+
Sbjct: 23 WRPDALLGRELSGKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEAL 75
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 3e-05
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLG 55
V D VV IP+G + A + +T Y Y L +PG V + GG+G
Sbjct: 63 VTDARLVVPIPDGWSFEEAATVPVVFLTAY-----YALVDLARLRPGESVLIHAAAGGVG 117
Query: 56 HVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRD 96
A++ A+ +G +V + SP K+ + + LG D SRD
Sbjct: 118 QAAIQLARHLGAEVFATAGSPEKR-DFLRALGIPDDHIFSSRD 159
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 42.4 bits (101), Expect = 3e-05
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMG 66
+V++P+G + A LL G+T + LR KPG V V GG+G + ++AKA+G
Sbjct: 102 LVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALG 161
Query: 67 VKVTVIST-SPSKKSEAVERLGADSFLVSRDQD 98
TVI T S +K+E GAD + RD+D
Sbjct: 162 --ATVIGTVSSEEKAELARAAGADHVINYRDED 192
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 15/157 (9%)
Query: 8 VVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 64
+ +PE L+A A PL A V +PG V V G G +G +A + AK
Sbjct: 131 LHELPENLSLEAAALTEPLAVAVHAVAERSGI----RPGDTVVVFGPGPIGLLAAQVAKL 186
Query: 65 MGVKVTVISTSPSKKSEAV-ERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVH 118
G V V+ T + V + LGAD+ +D + DG +I+ AV
Sbjct: 187 QGATVVVVGTEKDEVRLDVAKELGADAVNGGE-EDLAELVNEITDGDGADVVIECSGAVP 245
Query: 119 PLMPLIGLLKSQGKLVLLG-APEKPLELPAFPLLTGE 154
L + LL+ G++V +G + ++ E
Sbjct: 246 ALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKE 282
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 2 VADEHFVVRI-PEGAPLDATAPLL-CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVA 58
++D + ++ P APL A +L G+T Y L G K G V V G +G V
Sbjct: 108 ISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVV 167
Query: 59 VKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD--EM--QAAMGTMDGIIDTV 114
+ AK G +V I+ K E LG D+ + + +D + +A +D + V
Sbjct: 168 GQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENV 227
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGA------PEKPLELPAFPLL 151
L ++ LL ++ + GA PE P PLL
Sbjct: 228 GGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLL 269
|
Length = 340 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V E VV+I + PLD + C T + +PG V V+G+GG+G AV+
Sbjct: 144 TVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAVQ 203
Query: 61 FAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAM----GTM-DGIIDTV 114
A G + VI+ P + K E + GA S + + +Q G D I TV
Sbjct: 204 GAAVAGAR-KVIAVDPVEFKREQALKFGATHAFASME-EAVQLVRELTNGQGADKTIITV 261
Query: 115 SAVHPLM 121
V
Sbjct: 262 GEVDGEH 268
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-05
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGVV-GLGGL 54
+ D VV+IP+ + A L A +T Y Y L + G V + GG+
Sbjct: 67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAY-----YALVDLARLQKGESVLIHAAAGGV 121
Query: 55 GHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRD 96
G A++ A+ +G +V S K+ E G D SRD
Sbjct: 122 GQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRD 164
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-05
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 19/162 (11%)
Query: 2 VADEHFVVRIPEGAPLD--ATAP--LLCAGITVYS----PLRFYGLDKPGMHVGVVGLGG 53
VAD +IP+ + AT P L+ A + ++ PL V+ GG
Sbjct: 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGG 163
Query: 54 ---LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD----QDEMQAAMGT 106
+G +A++ AK G K VI+T+ K + V+ LGAD+ D +D A G
Sbjct: 164 SSSVGTLAIQLAKLAGYK--VITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK 221
Query: 107 MDGIIDTVSAVHPLMPLIGLLKS--QGKLVLLGAPEKPLELP 146
+ +D +S L GKLV L + E
Sbjct: 222 LRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR 263
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
M+ E ++ +P+ A LLC T Y LR G+ V VVG G +G A+
Sbjct: 123 MLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVVGAGPVGLGALM 181
Query: 61 FAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV 114
A+A+G + VI PS ++ E + LGAD F+++ QD++Q G I+
Sbjct: 182 LARALGAE-DVIGVDPSPERLELAKALGAD-FVINSGQDDVQEIRELTSGAGADVAIECS 239
Query: 115 SAVHPLMPLIGLLKSQGKLVLLG 137
+ ++ G+LVL+G
Sbjct: 240 GNTAARRLALEAVRPWGRLVLVG 262
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 29 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA 88
+ PL F G D G +G++G G +G + AK G++ ++ S ++K EA + LGA
Sbjct: 136 VAWHPLMFLGYDVYGKTIGIIGFGRIGQAVARRAKGFGMR--ILYYSRTRKPEAEKELGA 193
Query: 89 D 89
+
Sbjct: 194 E 194
|
Length = 333 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 67
+V +P+ P AP CA TV + L G D G V VVG G LG A A A G
Sbjct: 87 IVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGA 145
Query: 68 KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLI 124
V + + E GA + E Q + +D ++ A + +
Sbjct: 146 ARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACL 205
Query: 125 GLLKSQGKLVLLG--APEKPLEL 145
L G VL G P P+ L
Sbjct: 206 ESLDVGGTAVLAGSVFPGGPVAL 228
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 3e-04
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96
K G V V+G GG+G V+ AKAMG V I P K E ++ GAD L +D
Sbjct: 165 KKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPE-KLEMMKGFGADLTLNPKD 219
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 3e-04
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD 89
F G + G VG+VGLG +G K +A G+K V+ ++K E E LG
Sbjct: 130 WAGFPGYELEGKTVGIVGLGRIGQRVAKRLQAFGMK--VLYYDRTRKPEPEEDLGFR 184
|
Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 3e-04
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 67
V +I APLD L C T Y + +PG V V GLG +G ++ AKA G
Sbjct: 152 VAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGA 211
Query: 68 -KVTVISTSPSKKSEAVERLGADSFLVSRDQDE-MQAAMGTM-DGIID 112
++ I +P K E ++ GA + +D D+ +Q + M DG +D
Sbjct: 212 SRIIGIDINPDKF-ELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVD 258
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 3e-04
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVK 60
VAD + +P+G L+A ++ G T L L PG V V GGLG + V+
Sbjct: 103 VADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATL-TPGDVVLVTAAAGGLGSLLVQ 161
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGAD 89
AKA G V + P K+ V LGAD
Sbjct: 162 LAKAAGATVVGAAGGP-AKTALVRALGAD 189
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 4e-04
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100
PG V V+G G LG + + G V ++ S+K RLG ++ L + E
Sbjct: 154 TPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVG-RHSEKLALARRLGVETVLPDEAESEG 212
Query: 101 QA------AMGTMDGIIDTVSAVHP 119
A G+ G+ + V P
Sbjct: 213 GGFDVVVEATGSPSGLELALRLVRP 237
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 4e-04
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG--VV---GLGGLGH 56
V E+ V + P+ + A L AG+T +S L G P G V+ G GG+G
Sbjct: 118 VVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177
Query: 57 VAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA--AMGTMDGIIDTV 114
A++ KA G VT T + V+ LGAD + ++D + G D I+DTV
Sbjct: 178 FAIQLLKAWGAHVTT--TCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTV 235
Query: 115 -SAVHPLMPLIGLLKSQGKLVLLGAPE 140
+ LLK G V L +P
Sbjct: 236 GGDTEKWA--LKLLKKGGTYVTLVSPL 260
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 4e-04
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84
F G + G VG++GLG +G K KA G+KV ++ V+
Sbjct: 133 KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD 183
|
Length = 324 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 5e-04
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GLGGLGHVAV 59
V V +PE P PLL +G+T L G K G V V GG G AV
Sbjct: 100 QVVPARHAVPVPELKP--EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAV 157
Query: 60 KFAKAMGVKVTVIST-SPSKKSEAVERLGAD 89
+ AK G VI T S +K+E ++ LG D
Sbjct: 158 QLAKLAG--CHVIGTCSSDEKAEFLKSLGCD 186
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|240655 cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 7e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER-LGAD 89
+PL F G + G +G++G+G +G + AKA G+K ++ + + SE E+ LGA
Sbjct: 133 APLFFLGHELAGKTLGIIGMGRIGQAVARRAKAFGMK--ILYYNRHRLSEETEKELGAT 189
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 317 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 8e-04
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 50 GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-VERLGADSFLVSRDQD---EMQA-AM 104
G GG+G +A++ AK + +TVI+T+ +S A V+ LGAD +++ QD +++A +
Sbjct: 158 GAGGVGSIAIQLAKQLT-GLTVIATASRPESIAWVKELGAD-HVINHHQDLAEQLEALGI 215
Query: 105 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF 148
+D I + L+ QG + L+ P++PL+L
Sbjct: 216 EPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPL 259
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.001
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 5 EHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKF 61
++ IP+ + A APL +T + L +PG V V G G G+G A++
Sbjct: 129 ARNLLPIPDNLSFEEAAAAPL--TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQI 186
Query: 62 AKAMGVKVTVISTSPSKKSEAVERLGAD 89
AK G V + S K A E LGAD
Sbjct: 187 AKLFGATVIATAGSEDKLERAKE-LGAD 213
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.001
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 43 GMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVERLGADSFLVSRDQ--DE 99
G +V ++G G +G +A++ A A+G K VT I + +K + LGA SR+ +
Sbjct: 161 GKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINS-EKLALAKSLGAMQTFNSREMSAPQ 219
Query: 100 MQAAMGTM--DGIIDTVSAVHPLMPL-IGLLKSQGKLVLLGAPEKPLELPA 147
+Q+ + + D +I + V + L I + + +L L+G L L +
Sbjct: 220 IQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTS 270
|
Length = 347 |
| >gnl|CDD|181414 PRK08410, PRK08410, 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 32 SPLRFYGLDKP-----GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86
SP+ F + +P G G++GLG +G K A+A G KV STS K+E ER+
Sbjct: 130 SPI-FTHISRPLGEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERV 188
Query: 87 GADSFLVSRD 96
+ L + D
Sbjct: 189 SLEELLKTSD 198
|
Length = 311 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.002
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQD- 98
+PG V V G G +G + AKA G KV V PS+ A E LGA + R +D
Sbjct: 161 RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDT 219
Query: 99 -----EMQAAMGTM--DGIIDTV---SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP 146
++ +G D +I+ S + I + G +VL+G + + LP
Sbjct: 220 PESAEKIAELLGGKGPDVVIECTGAESCIQ---TAIYATRPGGTVVLVGMGKPEVTLP 274
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.002
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLV--SRDQD 98
P +V V+G G +G V + A+A G ++ ++ + S A + LGAD ++ + +D
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIED 239
Query: 99 ------EMQAAMGT-MDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFP 149
E+Q AMG +D D V + + ++ GK+ L+G + +P P
Sbjct: 240 VESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTP 297
|
Length = 364 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.002
Identities = 47/178 (26%), Positives = 64/178 (35%), Gaps = 43/178 (24%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLC-------AGITVYSPLRFYGLDKPGMHVGVVGLGGL 54
V V +I APLD L C A V K G V + GLG +
Sbjct: 147 VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-------KKGSTVAIFGLGAV 199
Query: 55 GHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQD----EMQAAM----- 104
G + A+ G ++ + +PSK +A ++ G F+ +D D E+ A M
Sbjct: 200 GLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNPKDHDKPVQEVIAEMTGGGV 258
Query: 105 -------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFP--LLTG 153
G +D +I VH G VLLG P K P LL G
Sbjct: 259 DYSFECTGNIDAMISAFECVHD---------GWGVTVLLGVPHKDAVFSTHPMNLLNG 307
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.003
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 2 VADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGL 54
V V +IP+ + A PL CA +GLD KPG V V G G +
Sbjct: 121 VVPAKQVYKIPDNLSFEEAALAEPLSCA---------VHGLDLLGIKPGDSVLVFGAGPI 171
Query: 55 GHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG---I 110
G + + K G +VTV + K E ++LGA + +D G +
Sbjct: 172 GLLLAQLLKLNGASRVTVAEPNEEKL-ELAKKLGATETVDPSREDPEAQKEDNPYGFDVV 230
Query: 111 IDTVSAVHPLMPLIGLLKSQGKLVLLG--APEKPLELPAF 148
I+ L I + G +++ G AP+ + + F
Sbjct: 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPF 270
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 37.1 bits (86), Expect = 0.003
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
V E + +I APL+ L C T + + G V V GLGG+G ++
Sbjct: 145 VVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQG 204
Query: 62 AKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99
A+ ++ I +P+ K E ++LGA + D D+
Sbjct: 205 ARMAKASRIIAIDINPA-KFELAKKLGATDCVNPNDYDK 242
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|223980 COG1052, LdhA, Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.003
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF 91
P G D G +G++GLG +G + K G+K V+ S EA + LGA
Sbjct: 135 GPDPLLGFDLRGKTLGIIGLGRIGQAVARRLKGFGMK--VLYYDRSPNPEAEKELGARYV 192
Query: 92 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP----LIG-----LLKSQGKLV 134
D DE+ A D +S PL P LI +K LV
Sbjct: 193 ----DLDELLAES-------DIISLHCPLTPETRHLINAEELAKMKPGAILV 233
|
Length = 324 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.004
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 59
+ ++ +P+G A L AG+T LR G G V V G GG+G AV
Sbjct: 92 VAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGG-PLLGRRVLVTGASGGVGRFAV 150
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
+ A G V + SP ++E + LGA +V + + +D ++D+V
Sbjct: 151 QLAALAGAHVVAVVGSP-ARAEGLRELGAAEVVVGGS----ELSGAPVDLVVDSVGG-PQ 204
Query: 120 LMPLIGLLKSQGKLVLLGA 138
L + LL G +V +G+
Sbjct: 205 LARALELLAPGGTVVSVGS 223
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 36.3 bits (84), Expect = 0.004
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102
G V V+G GG+G A+ A G + +K E GA + S D ++A
Sbjct: 177 GDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEA 236
Query: 103 AMGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLLGAP--EKPLELPAFPLLT--G 153
G +ID V G +VL+G P + LELP + G
Sbjct: 237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGG 296
Query: 154 EEEDSWW 160
+ SW+
Sbjct: 297 ALKSSWY 303
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 173 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 99.96 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 99.95 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 99.93 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 99.93 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 99.93 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 99.92 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 99.92 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 99.92 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 99.91 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 99.91 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 99.91 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 99.9 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 99.9 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 99.89 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 99.89 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 99.89 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 99.89 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 99.89 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 99.88 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 99.88 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 99.88 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 99.88 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 99.88 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 99.87 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 99.87 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 99.87 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 99.87 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 99.87 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 99.87 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 99.86 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 99.86 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 99.86 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 99.85 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 99.85 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 99.85 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 99.85 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 99.85 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 99.85 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 99.85 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 99.85 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 99.84 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 99.84 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 99.83 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 99.83 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 99.83 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 99.83 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 99.83 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 99.82 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 99.82 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 99.82 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 99.82 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 99.82 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 99.81 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 99.81 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.81 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 99.81 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 99.81 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 99.81 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 99.81 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 99.81 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 99.81 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 99.8 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 99.8 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 99.8 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 99.8 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 99.79 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 99.79 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 99.79 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 99.79 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 99.79 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 99.79 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 99.79 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 99.78 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 99.78 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 99.78 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 99.78 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 99.78 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 99.78 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 99.78 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 99.78 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 99.78 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 99.77 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 99.77 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 99.77 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 99.77 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 99.77 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.77 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 99.77 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 99.77 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 99.77 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 99.77 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 99.76 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 99.76 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 99.76 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 99.76 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 99.76 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 99.75 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 99.74 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 99.74 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.74 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 99.74 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 99.74 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 99.74 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 99.74 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 99.74 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 99.73 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.73 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 99.73 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 99.73 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.72 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 99.72 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 99.72 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 99.72 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 99.72 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 99.72 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 99.72 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 99.7 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.7 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 99.69 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 99.69 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 99.68 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 99.67 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 99.66 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 99.65 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 99.65 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 99.65 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 99.57 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.5 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.45 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 99.2 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 99.16 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 99.08 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 99.03 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.98 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.96 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.9 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 98.82 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.76 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.74 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 98.73 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.64 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 98.55 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.53 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 98.51 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.4 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 98.39 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.38 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 98.34 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.33 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.32 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.31 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.3 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.3 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.29 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.29 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 98.28 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.28 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.27 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 98.27 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 98.27 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 98.26 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.26 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 98.25 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.25 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.23 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.21 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.21 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 98.2 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.2 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.2 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.19 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.15 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.14 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.12 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 98.11 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 98.11 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.1 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.1 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 98.1 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.08 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 98.07 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 98.05 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 98.05 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.04 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.04 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 98.03 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 98.03 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 98.03 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 98.02 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.02 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.02 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 98.01 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 98.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 97.99 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.99 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.99 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.98 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.98 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.98 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.97 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.97 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.97 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.97 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.96 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 97.95 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 97.94 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.93 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.92 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 97.92 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.91 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.91 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 97.91 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 97.89 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.89 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 97.89 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.88 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.87 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.86 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.86 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.86 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.86 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.85 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.85 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.84 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.84 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.84 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.83 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.83 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.83 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.82 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.82 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.82 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.82 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 97.81 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.81 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 97.8 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.8 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 97.8 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.8 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.79 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.79 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.77 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 97.77 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.75 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.74 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 97.74 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 97.74 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 97.73 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.73 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.73 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.72 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.71 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.71 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.71 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.71 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 97.71 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.7 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.69 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.69 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.69 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.68 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.67 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.67 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 97.67 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 97.66 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.66 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 97.66 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.65 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.65 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.65 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 97.64 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.64 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.63 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 97.63 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.63 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 97.63 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.63 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.63 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.62 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.62 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.62 | |
| PLN02928 | 347 | oxidoreductase family protein | 97.61 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.61 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.61 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 97.6 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.59 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.59 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.59 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.59 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.59 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.59 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.58 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.58 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.58 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.58 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.58 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.58 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 97.57 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.57 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 97.57 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.56 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.55 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.55 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 97.55 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.55 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.55 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.54 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.53 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 97.53 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 97.53 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.53 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 97.52 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.52 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.52 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.52 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.52 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.51 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 97.51 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.51 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.5 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 97.5 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.49 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.49 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.49 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.49 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.48 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 97.47 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.47 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 97.47 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.47 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 97.46 | |
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 97.46 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.46 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.46 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.46 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 97.46 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 97.45 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 97.45 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.45 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 97.44 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.44 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.43 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.42 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 97.42 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 97.42 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 97.41 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 97.41 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.41 | |
| PLN02366 | 308 | spermidine synthase | 97.41 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 97.41 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.41 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.41 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.41 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 97.4 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.4 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.39 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.39 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.39 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.38 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.38 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.38 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.38 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.38 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 97.37 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.37 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.37 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 97.37 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.37 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 97.36 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 97.36 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.36 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.36 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 97.36 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.36 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.36 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.35 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.35 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 97.35 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.34 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.34 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 97.34 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.34 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 97.34 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.33 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.33 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.33 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.33 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 97.33 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.33 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 97.32 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 97.32 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.32 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.32 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.32 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.32 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 97.31 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 97.31 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 97.31 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.31 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.31 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.31 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.3 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 97.3 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.29 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 97.29 | |
| PLN02476 | 278 | O-methyltransferase | 97.29 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 97.28 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 97.28 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.27 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 97.27 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 97.27 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 97.27 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.26 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 97.26 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 97.26 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 97.26 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 97.26 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 97.25 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.25 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.24 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.24 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.24 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.24 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.24 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.24 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 97.23 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 97.23 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 97.23 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.23 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.23 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 97.23 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.22 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.22 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 97.22 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.22 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 97.21 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 97.2 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.2 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 97.2 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.19 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.19 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.19 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.19 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 97.19 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.18 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.18 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.18 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.18 | |
| PRK04266 | 226 | fibrillarin; Provisional | 97.18 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 97.17 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.17 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.16 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 97.16 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 97.16 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 97.15 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.15 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.15 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.14 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.14 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.14 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 97.13 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.13 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 97.13 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-30 Score=192.97 Aligned_cols=166 Identities=46% Similarity=0.673 Sum_probs=149.5
Q ss_pred CccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 1 v~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++|+++++++|+++++++||++.|++.|.|+++..... ++|++|+|.|.|++|.+++|+++++|++|++++++++|++
T Consensus 126 v~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e 204 (339)
T COG1064 126 VVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLE 204 (339)
T ss_pred EEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHH
Confidence 468899999999999999999999999999999988554 9999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CC-cccCccccccCcccce
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KP-LELPAFPLLTGEEEDS 158 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~ 158 (173)
.+++ +|++++++.++.+..+.+.+.+|++|++++ +..++.+++.|+++|+++.+|... +. ..++.+.+..+++.
T Consensus 205 ~a~~-lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~-- 280 (339)
T COG1064 205 LAKK-LGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEIS-- 280 (339)
T ss_pred HHHH-hCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeE--
Confidence 9999 999999998777777766667999999999 768999999999999999999884 43 56888889999988
Q ss_pred eeeccccccCCCC
Q 030694 159 WWQSHWGVEGDSR 171 (173)
Q Consensus 159 ~~~~~~~~~~~~~ 171 (173)
+.++..+++.|.+
T Consensus 281 i~GS~~g~~~d~~ 293 (339)
T COG1064 281 IVGSLVGTRADLE 293 (339)
T ss_pred EEEEecCCHHHHH
Confidence 6788777776653
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=181.02 Aligned_cols=160 Identities=31% Similarity=0.434 Sum_probs=137.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|+++++++|+++|+++||+++++++|||+++.....+++|++|||+|+ |++|+.++|+++.+|++++++..++++.+
T Consensus 102 ~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 102 VVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred EecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 57899999999999999999999999999999999888899999999997 99999999999999988888888888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc---C--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM---G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~---~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
.+++ +|+++++++.+.++.+++. + ++|++||++|+. .+..++.+|+++|+++.+|..++ ...++...++.+
T Consensus 182 ~~~~-lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~ 259 (326)
T COG0604 182 LLKE-LGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGK 259 (326)
T ss_pred HHHh-cCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhc
Confidence 7777 9999999998876555543 2 799999999999 68899999999999999998763 445666667666
Q ss_pred cccceeeecc
Q 030694 154 EEEDSWWQSH 163 (173)
Q Consensus 154 ~~~~~~~~~~ 163 (173)
.....++..+
T Consensus 260 ~~~~~g~~~~ 269 (326)
T COG0604 260 RLTLRGVTLG 269 (326)
T ss_pred cEEEEEecce
Confidence 6664444443
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=168.71 Aligned_cols=168 Identities=60% Similarity=0.921 Sum_probs=149.4
Q ss_pred CccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 1 v~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++++.+++++|+++++++||++.|++.|+|..|.+..- .+|+++-|.|+|++|.+++|+++++|.+|+++++++.+.+
T Consensus 141 ~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 141 AVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred EEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 367889999999999999999999999999999988776 7999999999977999999999999999999999997767
Q ss_pred HHHHHcCCCEEeeCC-ChHHHHHhcCCccEEEEcCC--CccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSR-DQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~-~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
++-+.+|++..++.. +.++++++.+-.|.+++++. ....++.++.+++++|+++++|.+.++..++.+++..+.+.
T Consensus 220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~- 298 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKS- 298 (360)
T ss_pred HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEE-
Confidence 666669999888887 78888888877777777777 66679999999999999999999888889999999999987
Q ss_pred eeeeccccccCCCC
Q 030694 158 SWWQSHWGVEGDSR 171 (173)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (173)
+.+++.+++.|.+
T Consensus 299 -I~GS~vG~~ket~ 311 (360)
T KOG0023|consen 299 -IKGSIVGSRKETQ 311 (360)
T ss_pred -EEeeccccHHHHH
Confidence 7788888877654
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-25 Score=162.47 Aligned_cols=161 Identities=22% Similarity=0.262 Sum_probs=137.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+.++++++++|+++|+|++|.+ ..++.+|+|+++... +.|++|||+|+|++|+++...|++.|+ +|++++..++|++
T Consensus 131 ~~~~dfc~KLPd~vs~eeGAl~-ePLsV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle 208 (354)
T KOG0024|consen 131 VHPADFCYKLPDNVSFEEGALI-EPLSVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLE 208 (354)
T ss_pred EechHheeeCCCCCchhhcccc-cchhhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHH
Confidence 5688999999999999998744 458888999987665 999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCCh---HHHHHh----cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 81 EAVERLGADSFLVSRDQ---DEMQAA----MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~----~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+++ +|++.+.+.... +.+.+. .+ .+|+.|||.|....++.++..++.+|+++..|...+..++|..+..
T Consensus 209 ~Ak~-~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~ 287 (354)
T KOG0024|consen 209 LAKK-FGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVA 287 (354)
T ss_pred HHHH-hCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhh
Confidence 9999 999877655542 222222 22 5999999999998899999999999999999988888999999999
Q ss_pred cCcccceeeecccc
Q 030694 152 TGEEEDSWWQSHWG 165 (173)
Q Consensus 152 ~~~~~~~~~~~~~~ 165 (173)
.+++.....+.|..
T Consensus 288 ~kE~~~~g~fry~~ 301 (354)
T KOG0024|consen 288 LKEVDLRGSFRYCN 301 (354)
T ss_pred hheeeeeeeeeecc
Confidence 99998666555544
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=156.78 Aligned_cols=153 Identities=25% Similarity=0.306 Sum_probs=138.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|...++++|+.++++++|++...++|||..+++...+++|++||++.+ |++|++++|+++..|++++.+.++.+|++
T Consensus 106 ~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~ 185 (336)
T KOG1197|consen 106 TVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHE 185 (336)
T ss_pred cccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHH
Confidence 57888999999999999999999999999999999999999999999987 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcC-----CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMG-----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~-----~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ .|+++.|+++..+..+++.. |+|+++|.+|.. ++...+.+|++.|.++.+|+.++. -++++..+--+.
T Consensus 186 ~ake-nG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~ 263 (336)
T KOG1197|consen 186 IAKE-NGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKA 263 (336)
T ss_pred HHHh-cCCcceeeccchhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhh
Confidence 9999 99999999999888777642 899999999999 699999999999999999987764 356666665555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
++
T Consensus 264 l~ 265 (336)
T KOG1197|consen 264 LQ 265 (336)
T ss_pred hh
Confidence 53
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=169.44 Aligned_cols=155 Identities=68% Similarity=1.132 Sum_probs=131.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|+++++++++++++++.|+|+++.....+++|++|+|.|+|++|++++|+++.+|++|++++.+++++..
T Consensus 143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~ 222 (360)
T PLN02586 143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDE 222 (360)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhh
Confidence 56788999999999999999999999999999987766689999999999999999999999999999988887777655
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+.+++|+++++++.+.+.+.+..+++|++||++|....+..++++++++|+++.+|...+...++...++.++..
T Consensus 223 ~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~ 297 (360)
T PLN02586 223 AINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKL 297 (360)
T ss_pred HHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeE
Confidence 544499999988766544555556899999999987678899999999999999997655566777777777655
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=162.07 Aligned_cols=161 Identities=24% Similarity=0.244 Sum_probs=133.5
Q ss_pred ccccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
++|++ .++++|+++++++++++++++.|+|+++.+... .++++|+|+|+|++|++++|+++.+|++ |++++++++|+
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 56776 699999999999999999999999999977665 6899999999999999999999999996 88888899999
Q ss_pred HHHHHHcCCCEEeeCCCh-HHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQ-DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~-~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++.+. +...+.. .++|++||++|.+..++.++++++++|+++.+|... ...+++...++.++
T Consensus 159 ~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 ELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 99988 999988876543 2223332 379999999998877899999999999999999653 34577888888888
Q ss_pred ccceeeeccccc
Q 030694 155 EEDSWWQSHWGV 166 (173)
Q Consensus 155 ~~~~~~~~~~~~ 166 (173)
.+ +.+++..+
T Consensus 238 ~~--i~g~~~~~ 247 (280)
T TIGR03366 238 LT--IRGVHNYE 247 (280)
T ss_pred cE--EEecCCCC
Confidence 87 44444433
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=164.92 Aligned_cols=155 Identities=29% Similarity=0.394 Sum_probs=133.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|+++++++|+++++++++.+++++.|||+++.....++++++|+|.|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 151 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 151 VVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred EecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 567889999999999999999999999999998776777999999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~ 154 (173)
.+++ +|++.++++.+.+..+++. +++|++|||+|....+..++++++++|+++.+|...+ ..+++...++.++
T Consensus 231 ~a~~-~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 231 LARE-LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HHHH-cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 9988 9999999887655443332 3799999999987678999999999999999997643 3467777777787
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 310 ~~i 312 (371)
T cd08281 310 RTL 312 (371)
T ss_pred CEE
Confidence 763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-24 Score=164.54 Aligned_cols=162 Identities=52% Similarity=0.854 Sum_probs=135.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++++++++.|||+++......++|++++|+|+|++|++++|+++.+|++|++++++++++..
T Consensus 140 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~ 219 (357)
T PLN02514 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREE 219 (357)
T ss_pred EEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999987776689999999988999999999999999999999988888777
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeee
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQ 161 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (173)
+.+.+|++.++++.+.+.+.+...++|++|||+|....+..++++++++|+++.+|...+..+++...++.++.+ +.+
T Consensus 220 ~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~--i~g 297 (357)
T PLN02514 220 ALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKV--ITG 297 (357)
T ss_pred HHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcE--EEE
Confidence 765699988877665544444556899999999976678899999999999999997765556777777777775 334
Q ss_pred cccc
Q 030694 162 SHWG 165 (173)
Q Consensus 162 ~~~~ 165 (173)
++..
T Consensus 298 ~~~~ 301 (357)
T PLN02514 298 SFIG 301 (357)
T ss_pred EecC
Confidence 4433
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-24 Score=165.08 Aligned_cols=155 Identities=60% Similarity=1.001 Sum_probs=130.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch-H
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-K 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~-~ 79 (173)
++|++.++++|+++++++++++++++.|+|+++..... .+++++|+|.|+|++|++++|+++.+|++|++++.++++ .
T Consensus 137 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~ 216 (375)
T PLN02178 137 VVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKER 216 (375)
T ss_pred EEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhH
Confidence 56788999999999999999999999999999876653 268999999999999999999999999999999887665 5
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
+.+++ +|+++++++.+.+.+.+..+++|++|||+|.+..+..++++++++|+++.+|...+...++...++.++..+
T Consensus 217 ~~a~~-lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i 293 (375)
T PLN02178 217 EAIDR-LGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMV 293 (375)
T ss_pred HHHHh-CCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEE
Confidence 66666 999999887654444444457999999999886788999999999999999976555667777787777763
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=160.60 Aligned_cols=153 Identities=23% Similarity=0.290 Sum_probs=128.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++ +...+.+||+++.+... .++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 131 ~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~ 208 (343)
T PRK09880 131 VVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS 208 (343)
T ss_pred EechHHeEECCCCCCHHHHH-hhcHHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence 56788999999999987644 56677899999987665 689999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh--cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA--MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
.+++ +|+++++++.+.+..+.. .+++|++|||+|.+..++.++++++++|+++.+|......+++...++.++..+
T Consensus 209 ~a~~-lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i 286 (343)
T PRK09880 209 LARE-MGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISL 286 (343)
T ss_pred HHHH-cCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEE
Confidence 9998 999999988764432211 236999999999876788999999999999999976555677777777777763
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=160.81 Aligned_cols=154 Identities=25% Similarity=0.307 Sum_probs=130.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|+++++++|+++++++++.+++.+.|||+++.....++++++|+|+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467789999999999999999999999999988777777999999999999999999999999999 5999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC--cccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~ 153 (173)
.+++ +|+++++++.+.+..+. ..+ ++|++|||+|++..+..++++++++|+++.+|...+. ..++...++.+
T Consensus 216 ~~~~-~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 294 (358)
T TIGR03451 216 WARE-FGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGR 294 (358)
T ss_pred HHHH-cCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhc
Confidence 9988 99999998876544333 222 7999999999876789999999999999999976542 45666667777
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 295 ~~~ 297 (358)
T TIGR03451 295 GGA 297 (358)
T ss_pred CCE
Confidence 665
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=160.95 Aligned_cols=152 Identities=28% Similarity=0.376 Sum_probs=126.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+++++.|||+++.... +++|++|+|+|+|++|++++|+++.+|++ |++++++++|++
T Consensus 124 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~ 202 (339)
T cd08239 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLE 202 (339)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5678899999999999999999999999999997655 48899999999999999999999999998 999999999999
Q ss_pred HHHHHcCCCEEeeCCChH--HHHHhc-C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc-cccccCcc
Q 030694 81 EAVERLGADSFLVSRDQD--EMQAAM-G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~ 155 (173)
.+++ +|++.++++.+.+ .+.+.. + ++|++|||+|+...+..++++++++|+++.+|...+ ..++. ..++.++.
T Consensus 203 ~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 280 (339)
T cd08239 203 LAKA-LGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQR 280 (339)
T ss_pred HHHH-hCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCC
Confidence 9988 9999999887644 122222 2 799999999998666889999999999999997543 23443 34556666
Q ss_pred c
Q 030694 156 E 156 (173)
Q Consensus 156 ~ 156 (173)
.
T Consensus 281 ~ 281 (339)
T cd08239 281 T 281 (339)
T ss_pred E
Confidence 5
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=149.10 Aligned_cols=167 Identities=26% Similarity=0.377 Sum_probs=145.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+++...+.++++..++++++.|.|...|+|-|..+...+++|+++.|+|.|++|+++++-+++.|+ +++.++-+++|++
T Consensus 152 Vv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~ 231 (375)
T KOG0022|consen 152 VVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFE 231 (375)
T ss_pred EeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-----HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|++..+|+.+. +.+.++. +|+|+.|||+|+.+++++++.+.+.| |+-+.+|.... ..+++.+.++
T Consensus 232 ~ak~-fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~ 310 (375)
T KOG0022|consen 232 KAKE-FGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV 310 (375)
T ss_pred HHHh-cCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc
Confidence 9999 999999999842 2333333 49999999999999999999999999 99999997653 4677888888
Q ss_pred cCcccceeeeccccccCC
Q 030694 152 TGEEEDSWWQSHWGVEGD 169 (173)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~ 169 (173)
.+..+....+..+.++.+
T Consensus 311 ~GR~~~Gs~FGG~K~~~~ 328 (375)
T KOG0022|consen 311 TGRTWKGSAFGGFKSKSD 328 (375)
T ss_pred cccEEEEEecccccchhh
Confidence 877766555555555554
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=156.99 Aligned_cols=149 Identities=22% Similarity=0.328 Sum_probs=124.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++++++++.|||+++.+...++++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 145 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~ 224 (368)
T TIGR02818 145 VVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFE 224 (368)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998776677999999999999999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|++.++++.+ .+. +.++. +++|++|||+|.+..+..++++++++ |+++.+|...+ ...++...++
T Consensus 225 ~a~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~ 303 (368)
T TIGR02818 225 LAKK-LGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV 303 (368)
T ss_pred HHHH-hCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence 9988 99999988763 222 22332 38999999999876788999999886 99999997542 2344444444
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-22 Score=156.12 Aligned_cols=139 Identities=26% Similarity=0.334 Sum_probs=120.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.++++.+++++.|||+++.....+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 158 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 158 VLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred EEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 467788999999999999999999999999998776777999999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCCh--HH---HHHhcC-CccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQ--DE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~---~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 141 (173)
.+++ +|++.++++.+. ++ +.++.+ ++|++||++|.+..+..++.+++++ |+++.+|...+
T Consensus 238 ~a~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~ 304 (381)
T PLN02740 238 KGKE-MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304 (381)
T ss_pred HHHH-cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC
Confidence 9988 999989887652 22 223333 7999999999877789999999997 99999997654
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=148.80 Aligned_cols=160 Identities=28% Similarity=0.415 Sum_probs=140.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++++..+.+++++.+++.++.+.|...|.+-++.+...+++|+++.|+|.|++|++++|-++..|+ ++++++.+++|++
T Consensus 145 vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~ 224 (366)
T COG1062 145 VVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLE 224 (366)
T ss_pred eecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHH
Confidence 568889999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCChH-HH---HHhcC-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQD-EM---QAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~-~~---~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
++++ ||+++++|+.+.. .. .++.+ +.|++|||+|+...+++++.+++++|+.+.+|..+. ..+++..++...
T Consensus 225 ~A~~-fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g 303 (366)
T COG1062 225 LAKK-FGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303 (366)
T ss_pred HHHh-cCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence 9999 9999999998763 33 33444 999999999999999999999999999999997653 456777788777
Q ss_pred cccceeeecccc
Q 030694 154 EEEDSWWQSHWG 165 (173)
Q Consensus 154 ~~~~~~~~~~~~ 165 (173)
.. |.+++.+
T Consensus 304 r~---~~Gs~~G 312 (366)
T COG1062 304 RV---WKGSAFG 312 (366)
T ss_pred ce---EEEEeec
Confidence 33 4444443
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=154.88 Aligned_cols=149 Identities=29% Similarity=0.334 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|+++++++|+++++++++++++.+.|||+++.. ..+++|++|+|+|+|++|++++|+++..|++|++++++++|++.
T Consensus 126 ~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 126 TVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred EeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 56788999999999999999999999999999975 45699999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEED 157 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 157 (173)
+++ +|+++++++.+.. .+++|+++++.+....+..++++++++|+++.+|...+ ...++...++.++..+
T Consensus 205 a~~-~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 275 (329)
T TIGR02822 205 ALA-LGAASAGGAYDTP-----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQI 275 (329)
T ss_pred HHH-hCCceeccccccC-----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEE
Confidence 998 9999998754321 23689999998877789999999999999999997533 2356666666676653
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=154.52 Aligned_cols=159 Identities=25% Similarity=0.247 Sum_probs=130.2
Q ss_pred ccccceeEECCC------CCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 2 VADEHFVVRIPE------GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 2 ~~~~~~~~~~p~------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|.++++++|+ ++++++++++++++.|+|+++.. ..++++++|+|+|+|++|++++|+++..|++|++++++
T Consensus 121 ~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~ 199 (349)
T TIGR03201 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDID 199 (349)
T ss_pred EechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 567788999998 89999999999999999999876 45589999999999999999999999999999999999
Q ss_pred cchHHHHHHHcCCCEEeeCCCh---HHHHH---hcC--Ccc----EEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc
Q 030694 76 PSKKSEAVERLGADSFLVSRDQ---DEMQA---AMG--TMD----GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~---~~~~~---~~~--~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
++|++.+++ +|+++++++.+. +..+. ..+ ++| ++|||+|....+..++++++++|+++.+|...+..
T Consensus 200 ~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 278 (349)
T TIGR03201 200 PEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKT 278 (349)
T ss_pred HHHHHHHHH-hCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCc
Confidence 999999988 999988887553 22222 222 565 89999999877888999999999999999876555
Q ss_pred ccCccccccCcccceeeeccc
Q 030694 144 ELPAFPLLTGEEEDSWWQSHW 164 (173)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~ 164 (173)
.++...++.+..+ +.+++.
T Consensus 279 ~~~~~~~~~~~~~--~~g~~~ 297 (349)
T TIGR03201 279 EYRLSNLMAFHAR--ALGNWG 297 (349)
T ss_pred ccCHHHHhhcccE--EEEEec
Confidence 6666666665544 444443
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=153.40 Aligned_cols=155 Identities=21% Similarity=0.257 Sum_probs=127.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|++.++++|+++++++++++++++.++|+++.+...+++|++|+|+|+|++|++++|+++.+|+ .|++++++++|++
T Consensus 153 ~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~ 232 (378)
T PLN02827 153 VVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAE 232 (378)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 467889999999999999999999999999887766667999999999999999999999999999 5888888999999
Q ss_pred HHHHHcCCCEEeeCCCh--HH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCCcccCc-ccccc
Q 030694 81 EAVERLGADSFLVSRDQ--DE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPA-FPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~ 152 (173)
.+++ +|++.++++.+. ++ +.+.. +++|++||++|....+..+++.++++ |+++.+|.......++. ..++.
T Consensus 233 ~a~~-lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 233 KAKT-FGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HHHH-cCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 9988 999989887652 22 22222 37999999999876789999999998 99999997654444443 34666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 312 ~~~~i 316 (378)
T PLN02827 312 SGRTL 316 (378)
T ss_pred cCceE
Confidence 66653
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-22 Score=153.76 Aligned_cols=138 Identities=27% Similarity=0.369 Sum_probs=120.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|++.++++|+++++++++.+++++.|||+++.....++++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 146 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~ 225 (368)
T cd08300 146 VVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE 225 (368)
T ss_pred EEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 457789999999999999999999999999998776677999999999999999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCCh--HHH---HHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQ--DEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~---~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 140 (173)
.+++ +|+++++++.+. +.. .+.. +++|++||++|++..+..++++++++ |+++.+|...
T Consensus 226 ~~~~-lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~ 291 (368)
T cd08300 226 LAKK-FGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291 (368)
T ss_pred HHHH-cCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence 9987 999999987653 222 2222 37999999999876789999999987 9999999764
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=151.91 Aligned_cols=147 Identities=22% Similarity=0.221 Sum_probs=120.0
Q ss_pred ECCCCCCcc-cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC
Q 030694 10 RIPEGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (173)
Q Consensus 10 ~~p~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g 87 (173)
++|++++++ +++++++++.|||+++.....+++|++|+|+|+ |++|++++|+++.+|++|++++++++|++.+++.+|
T Consensus 125 ~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG 204 (348)
T PLN03154 125 QLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 204 (348)
T ss_pred cCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC
Confidence 458999886 678999999999999987777799999999998 999999999999999999999999999998874499
Q ss_pred CCEEeeCCCh-HHHH---Hhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cc-----cCccccccCccc
Q 030694 88 ADSFLVSRDQ-DEMQ---AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-----LPAFPLLTGEEE 156 (173)
Q Consensus 88 ~~~v~~~~~~-~~~~---~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~ 156 (173)
++.++++.+. +..+ +.. +++|++|||+|+. .+..++++++++|+++.+|...+. .+ ++...++.++.+
T Consensus 205 a~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~ 283 (348)
T PLN03154 205 FDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR 283 (348)
T ss_pred CCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccce
Confidence 9999998642 3222 222 3799999999987 689999999999999999975432 11 244556666665
Q ss_pred c
Q 030694 157 D 157 (173)
Q Consensus 157 ~ 157 (173)
+
T Consensus 284 i 284 (348)
T PLN03154 284 M 284 (348)
T ss_pred E
Confidence 3
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=151.97 Aligned_cols=136 Identities=28% Similarity=0.356 Sum_probs=119.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhC------CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
++|...++++|++++++++|++|.++.|||.++.... .+++|++|||+|+ |++|++++|+|+..|+..++++.
T Consensus 111 v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~ 190 (347)
T KOG1198|consen 111 VVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC 190 (347)
T ss_pred EcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc
Confidence 5678899999999999999999999999999999999 7899999999988 89999999999999976667777
Q ss_pred CcchHHHHHHHcCCCEEeeCCChHHHHHhcC----CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAMG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~----~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++.+.+++ +|+++++||++.+..+++.. ++|++|||+|+. .....+.++...|+...++..
T Consensus 191 s~e~~~l~k~-lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~ 257 (347)
T KOG1198|consen 191 SKEKLELVKK-LGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLV 257 (347)
T ss_pred ccchHHHHHH-cCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEec
Confidence 7888999998 99999999999877666543 899999999998 577888888888865555543
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-21 Score=149.90 Aligned_cols=150 Identities=27% Similarity=0.409 Sum_probs=125.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+++.++++++|+++++++++.+++++.|||+++.....+++|++|+|+|+|++|++++++++.+|+ +|++++++++|++
T Consensus 144 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 223 (365)
T cd08277 144 VVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFE 223 (365)
T ss_pred EEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998766677999999999989999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-----HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC-CcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
.+++ +|+++++++.+. +.+.+.. +++|++|||+|....+..++++++++ |+++.+|...+ ..+++...++.
T Consensus 224 ~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 302 (365)
T cd08277 224 KAKE-FGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL 302 (365)
T ss_pred HHHH-cCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh
Confidence 9987 999888887642 2222222 47999999999876788999999885 99999997653 34555555553
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-21 Score=149.55 Aligned_cols=153 Identities=24% Similarity=0.365 Sum_probs=126.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.+++++.|||+++.....+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 147 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~ 226 (369)
T cd08301 147 VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE 226 (369)
T ss_pred EEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467789999999999999999999999999998777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCC--cccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 151 (173)
.+++ +|++.++++.. .+. +.+.. +++|++||++|....+..++.+++++ |+++.+|..... .+++...++
T Consensus 227 ~~~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~ 305 (369)
T cd08301 227 QAKK-FGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL 305 (369)
T ss_pred HHHH-cCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh
Confidence 9988 99998888764 222 22222 37999999999886788999999996 999999976532 344443343
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
++++
T Consensus 306 -~~~~ 309 (369)
T cd08301 306 -NGRT 309 (369)
T ss_pred -cCCe
Confidence 4444
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=148.61 Aligned_cols=138 Identities=21% Similarity=0.217 Sum_probs=118.2
Q ss_pred cccc-ceeEECC-CCCCcc-cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADE-HFVVRIP-EGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|+ +.++++| ++++++ +++++++++.|||+++.....+++|++|+|+|+ |++|.+++|+++.+|++|++++++++
T Consensus 108 ~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~ 187 (338)
T cd08295 108 LIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187 (338)
T ss_pred EecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5677 7899995 678876 789999999999999987777899999999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCCh-HHH---HHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 78 KKSEAVERLGADSFLVSRDQ-DEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~-~~~---~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+.+++.+|+++++++.+. +.. .+.. +++|++||++|+. .+..++++++++|+++.+|...
T Consensus 188 ~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~ 254 (338)
T cd08295 188 KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMIS 254 (338)
T ss_pred HHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccc
Confidence 99988876899999986542 322 2222 4899999999986 6899999999999999998654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=149.89 Aligned_cols=136 Identities=26% Similarity=0.272 Sum_probs=116.6
Q ss_pred cccceeEEC----CCCCCcccc-cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 3 ADEHFVVRI----PEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 3 ~~~~~~~~~----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
+|.+++.++ |++++++++ +++++++.|||+++.....+++|++|+|+|+ |++|.+++|+++..|++|+++++++
T Consensus 94 ~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 94 SDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD 173 (325)
T ss_pred echhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 466666666 899999887 6899999999999977777799999999997 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCCh-HH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQ-DE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~-~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++.+.+++ +|++.++++.+. +. ..... +++|++||++|+. .+..++++++++|+++.+|...
T Consensus 174 ~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 174 EKVAYLKK-LGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HHHHHHHH-cCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchh
Confidence 99999988 999999988753 22 22222 3799999999988 5799999999999999998643
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-21 Score=147.25 Aligned_cols=156 Identities=35% Similarity=0.580 Sum_probs=132.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++++++++.|||+++... .+.++++|+|+|+|++|++++++++.+|++|+++++++++++.
T Consensus 124 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 124 LAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred EEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467788999999999999999999999999999776 6689999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccccee
Q 030694 82 AVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSW 159 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (173)
+++ +|+++++++...+..+.+. +++|+++|+.|....+...+++++++|+++.+|......+++...++.++.++..
T Consensus 203 ~~~-~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 281 (333)
T cd08296 203 ARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHG 281 (333)
T ss_pred HHH-cCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEE
Confidence 977 9999998887654433332 4799999999766578899999999999999997665556666666677776443
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-21 Score=149.98 Aligned_cols=154 Identities=25% Similarity=0.312 Sum_probs=128.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+ ..+.|||+++ ....++++++|+|+|+|++|.+++|+++..|+ +|+++++++++.+
T Consensus 134 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~ 211 (351)
T cd08233 134 VVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRE 211 (351)
T ss_pred EechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4577889999999999888755 6778999999 44556899999999989999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++.++++.+.++.+++ . +++|++||++|....+..++++++++|+++.+|......+++...++.++.
T Consensus 212 ~~~~-~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 290 (351)
T cd08233 212 LAEE-LGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEK 290 (351)
T ss_pred HHHH-hCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCc
Confidence 8887 999999988765544333 2 269999999997667899999999999999999766556777777777777
Q ss_pred cce
Q 030694 156 EDS 158 (173)
Q Consensus 156 ~~~ 158 (173)
.+.
T Consensus 291 ~i~ 293 (351)
T cd08233 291 TLT 293 (351)
T ss_pred EEE
Confidence 633
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=151.57 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=117.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g-~~v~~~~~~~~ 77 (173)
.+|+++++++|+++++++++ +.....++|+++... ..+++|++|+|+|+|++|++++|+++. .| .+|++++++++
T Consensus 122 ~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~ 200 (341)
T cd08237 122 FLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200 (341)
T ss_pred EEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHh
Confidence 57889999999999998766 556788889988643 234789999999999999999999986 55 58999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC---ccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
|++.+++ .+.++.++ +..+ ..++|++||++|+ +..+..++++++++|+++.+|...+..+++...++.++
T Consensus 201 k~~~a~~-~~~~~~~~----~~~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~ 273 (341)
T cd08237 201 KLDLFSF-ADETYLID----DIPE--DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKG 273 (341)
T ss_pred HHHHHhh-cCceeehh----hhhh--ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCc
Confidence 9999987 77654432 1111 1269999999995 34688999999999999999976555667777778887
Q ss_pred ccce
Q 030694 155 EEDS 158 (173)
Q Consensus 155 ~~~~ 158 (173)
.++.
T Consensus 274 ~~i~ 277 (341)
T cd08237 274 LTLV 277 (341)
T ss_pred eEEE
Confidence 7633
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-21 Score=148.28 Aligned_cols=160 Identities=22% Similarity=0.260 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh------CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST- 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~------~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~- 74 (173)
.+|++.++++|++++ + ++++..+..++++++... ...+++++|+|+|+|++|++++|+++..|++|+++++
T Consensus 128 ~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 128 VDDPEYLVKVPPSLA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred EeccccEEECCCCCC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence 568889999999998 4 344445555544444322 2246899999999999999999999999999999998
Q ss_pred --CcchHHHHHHHcCCCEEeeCCChHHHH-HhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccC---
Q 030694 75 --SPSKKSEAVERLGADSFLVSRDQDEMQ-AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELP--- 146 (173)
Q Consensus 75 --~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~--- 146 (173)
+++|++.+++ +|++. +++.+.+..+ ...+++|++|||+|.+..+..++++++++|+++.+|...+ ..+++
T Consensus 206 ~~~~~~~~~~~~-~Ga~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~ 283 (355)
T cd08230 206 DPPDPKADIVEE-LGATY-VNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGE 283 (355)
T ss_pred CCCHHHHHHHHH-cCCEE-ecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhh
Confidence 5778888887 99986 4555433221 1234899999999987678899999999999999997655 34455
Q ss_pred -ccccccCcccceeeecccccc
Q 030694 147 -AFPLLTGEEEDSWWQSHWGVE 167 (173)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~~~ 167 (173)
...++.++.+ +.+++..++
T Consensus 284 ~~~~~~~k~~~--i~g~~~~~~ 303 (355)
T cd08230 284 LNRDLVLGNKA--LVGSVNANK 303 (355)
T ss_pred hhhhHhhcCcE--EEEecCCch
Confidence 3456667766 444444443
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-21 Score=147.36 Aligned_cols=155 Identities=27% Similarity=0.339 Sum_probs=124.4
Q ss_pred ccccceeEE-CCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 2 VADEHFVVR-IPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~-~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
++|.+++++ +|+++ ..+++++...+.+++++.......+++.+|+|+|+|++|++++++++..|+ +|++++.+++|+
T Consensus 128 ~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl 206 (350)
T COG1063 128 RVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL 206 (350)
T ss_pred EeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 466555555 47887 667788999999998885444444666699999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCEEeeCCChHH---HHHhc-C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc-ccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDE---MQAAM-G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~---~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 153 (173)
+.+++..|++.+++....+. ..+.. + ++|++|||+|.+..+.++++.++++|+++.+|...+.. .++...+..|
T Consensus 207 ~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~k 286 (350)
T COG1063 207 ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSK 286 (350)
T ss_pred HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhc
Confidence 99999566777766655322 22233 2 79999999998888999999999999999999887654 6778888888
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
++.+
T Consensus 287 el~l 290 (350)
T COG1063 287 ELTL 290 (350)
T ss_pred ccEE
Confidence 8873
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=145.87 Aligned_cols=154 Identities=28% Similarity=0.331 Sum_probs=126.7
Q ss_pred ccccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
.+|++ .++++|++++.++++.+++++.|||+++......+++++|||+|+|++|++++++++..|+ +|+++++++++.
T Consensus 136 ~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 136 YLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred EecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 35564 7999999999999888889999999999888876799999999889999999999999999 999999999999
Q ss_pred HHHHHHcCCCEEeeCCChH------HHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccc
Q 030694 80 SEAVERLGADSFLVSRDQD------EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFP 149 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~------~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~ 149 (173)
+.+++ +|.+.++++...+ .+.+.. .++|++|||+|+...+..++++++++|+++.+|.... ..+++...
T Consensus 216 ~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 294 (361)
T cd08231 216 ELARE-FGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER 294 (361)
T ss_pred HHHHH-cCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence 98887 9998888776432 233333 2799999999986578899999999999999996543 23455555
Q ss_pred cccCccc
Q 030694 150 LLTGEEE 156 (173)
Q Consensus 150 ~~~~~~~ 156 (173)
++.++..
T Consensus 295 ~~~~~~~ 301 (361)
T cd08231 295 IVRKNLT 301 (361)
T ss_pred HhhcccE
Confidence 5666665
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=144.43 Aligned_cols=136 Identities=26% Similarity=0.277 Sum_probs=116.8
Q ss_pred ccccc---eeEECCCCCC--c---ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE
Q 030694 2 VADEH---FVVRIPEGAP--L---DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 72 (173)
Q Consensus 2 ~~~~~---~~~~~p~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~ 72 (173)
+++++ .++++|++++ + ..++++++++.|||+++.....+++|++++|+|+ |++|.+++|+++..|++|+++
T Consensus 95 ~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~ 174 (329)
T cd08294 95 VSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGC 174 (329)
T ss_pred EECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 46777 9999999988 2 2234688999999999987777799999999997 999999999999999999999
Q ss_pred eCCcchHHHHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 73 STSPSKKSEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++++.+.+++ +|+++++++.+.+..+++ . +++|++||++|+. .+..++++++++|+++.+|..
T Consensus 175 ~~s~~~~~~l~~-~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 175 AGSDDKVAWLKE-LGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred eCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcch
Confidence 999999999998 999999998765543333 2 3799999999996 689999999999999999853
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=145.39 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCccc----ccchhhHHHHHHHHHHhhCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEe
Q 030694 2 VADEHFVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVIS 73 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~ 73 (173)
++|++.++++|++++.++ +++++.++.|||+++.....++++ ++|+|+|+ |++|.+++|+++.+|+ +|++++
T Consensus 108 ~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~ 187 (345)
T cd08293 108 VLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGIC 187 (345)
T ss_pred EecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEc
Confidence 578899999999865443 456788899999999777666766 99999998 9999999999999999 899999
Q ss_pred CCcchHHHHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 74 TSPSKKSEAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 74 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++|.+.+++++|++.++++.+.+..+. .. +++|++||++|+. .+..++++++++|+++.+|..
T Consensus 188 ~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 188 GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeee
Confidence 99999998877699999999876544333 22 3899999999998 578999999999999999853
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=144.77 Aligned_cols=153 Identities=24% Similarity=0.316 Sum_probs=120.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+. ...++++++.. ..++++++|+|+|+|++|++++|+++.+|++ |++++++++|++
T Consensus 122 ~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 199 (347)
T PRK10309 122 VVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199 (347)
T ss_pred EeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 46778899999999999888663 44557877644 4558999999999899999999999999996 788899999999
Q ss_pred HHHHHcCCCEEeeCCChH--HHHHhc--CCcc-EEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc---ccccc
Q 030694 81 EAVERLGADSFLVSRDQD--EMQAAM--GTMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA---FPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~--~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~ 152 (173)
.+++ +|+++++++...+ ...+.. .++| ++|||+|+...+..++++++++|+++.+|...+..+++. ..++.
T Consensus 200 ~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 278 (347)
T PRK10309 200 LAKS-LGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR 278 (347)
T ss_pred HHHH-cCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh
Confidence 9877 9999888876532 222222 2788 999999998778999999999999999997655444433 35666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 279 ~~~~i 283 (347)
T PRK10309 279 KELTV 283 (347)
T ss_pred cCcEE
Confidence 66653
|
|
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=137.54 Aligned_cols=166 Identities=20% Similarity=0.332 Sum_probs=137.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+.+++.++++++.++++.||.+.++.+|||+++..+-++.+|++|+..|+ +.+|.+.+|+|++.|.+-+.+.|+....+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ie 199 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIE 199 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHH
Confidence 45678999999999999999999999999999999999999999999999 89999999999999999888888877666
Q ss_pred HHHHH---cCCCEEeeCCCh---HHHHH--hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccCccccc
Q 030694 81 EAVER---LGADSFLVSRDQ---DEMQA--AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~---~g~~~v~~~~~~---~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~ 151 (173)
+++++ +|+++|+...+. +.... ...++.++|||+|+.+ -..+.+.|..||.++.+|..+ .+..++...++
T Consensus 200 el~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lI 278 (354)
T KOG0025|consen 200 ELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLI 278 (354)
T ss_pred HHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchhe
Confidence 66553 799999865432 11111 1347999999999995 678999999999999999765 56899999999
Q ss_pred cCccc-ceeeeccccccC
Q 030694 152 TGEEE-DSWWQSHWGVEG 168 (173)
Q Consensus 152 ~~~~~-~~~~~~~~~~~~ 168 (173)
+|++. ..||.+.|...+
T Consensus 279 FKdl~~rGfWvt~W~~~~ 296 (354)
T KOG0025|consen 279 FKDLKLRGFWVTRWKKEH 296 (354)
T ss_pred eccceeeeeeeeehhhcc
Confidence 99994 456666665544
|
|
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=144.45 Aligned_cols=152 Identities=30% Similarity=0.433 Sum_probs=125.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~ 79 (173)
.++.++++++|+++++++++.+++++.|||+++... ..+.++++|+|+|+|++|++++++++..| .+|+++.+++++.
T Consensus 126 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~ 205 (340)
T cd05284 126 LVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEAL 205 (340)
T ss_pred EecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 567789999999999999999999999999999876 45688999999999779999999999999 7999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|.++++++... ..++ .. .++|+++|++|+....+.++++++++|+++.+|..+. .+++...++.++
T Consensus 206 ~~~~~-~g~~~~~~~~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~ 282 (340)
T cd05284 206 KLAER-LGADHVLNASDD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTE 282 (340)
T ss_pred HHHHH-hCCcEEEcCCcc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcc
Confidence 99977 999888887764 3333 22 2799999999985578899999999999999986553 344444434455
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 283 ~~ 284 (340)
T cd05284 283 IS 284 (340)
T ss_pred eE
Confidence 54
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=143.54 Aligned_cols=153 Identities=60% Similarity=0.992 Sum_probs=130.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++++++.+++.+.|||+++.... ++++++++|.|+|++|.+++++++..|++|+++++++++.+.
T Consensus 130 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~ 208 (337)
T cd05283 130 VVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKED 208 (337)
T ss_pred EechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677899999999999999999999999999997776 589999999888999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|.+.+++....+......+++|++|||+|.......++++++++|+++.+|.......++...++.++..
T Consensus 209 ~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 282 (337)
T cd05283 209 ALK-LGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKS 282 (337)
T ss_pred HHH-cCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceE
Confidence 977 99988888766554444456899999999988558899999999999999997655445666665666665
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=143.87 Aligned_cols=154 Identities=29% Similarity=0.387 Sum_probs=128.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+++++++++|+++++++++++++++.||+.++.....++++++|+|+|+|++|++++++++..|+ ++++++++++|.+
T Consensus 146 ~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~ 225 (365)
T cd08278 146 VVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLE 225 (365)
T ss_pred EecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998777777899999999889999999999999999 6888889999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (173)
.+++ +|++.++++.+.+..+++ ..++|+++||+|....+..++++++++|+++.+|..+ ....++...++.++
T Consensus 226 ~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 304 (365)
T cd08278 226 LAKE-LGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSG 304 (365)
T ss_pred HHHH-cCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcC
Confidence 8887 999988887664332222 2489999999997667899999999999999999653 33456666654555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 305 ~~ 306 (365)
T cd08278 305 KT 306 (365)
T ss_pred ce
Confidence 54
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-20 Score=141.48 Aligned_cols=152 Identities=20% Similarity=0.228 Sum_probs=121.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
.+|++.++++|+++++++++++++.+.|||.++.. ... ++++++|+ |+ |++|++++|+++.+|++|++++++++|+
T Consensus 104 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~-~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~ 181 (324)
T cd08291 104 VADAQQCLPLPDGVSFEQGASSFVNPLTALGMLET-ARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV 181 (324)
T ss_pred eecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHh-hcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 56788999999999999999899999999865543 332 55666665 55 9999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-c-ccCcccccc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-ELPAFPLLT 152 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~ 152 (173)
+.+++ +|+++++++...++.+++ . +++|++||++|+. .....+.+++++|+++.+|..++. . .++...++.
T Consensus 182 ~~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 259 (324)
T cd08291 182 DLLKK-IGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIF 259 (324)
T ss_pred HHHHH-cCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhh
Confidence 99998 999999988765544333 2 2799999999988 467889999999999999965432 2 355666666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 260 ~~~~~ 264 (324)
T cd08291 260 KNKSI 264 (324)
T ss_pred cCcEE
Confidence 76653
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=139.14 Aligned_cols=153 Identities=21% Similarity=0.281 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++.+.|||+++.. ..++++++|+|+|+ |.+|++++++++.+|++++++..++++.+
T Consensus 100 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 100 VAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred EEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 46778899999999999999999999999999865 55689999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++.+.+..+++ . .++|++|||+|+. ....++++++++|+++.+|...+ ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (324)
T cd08292 179 ELRA-LGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQ 256 (324)
T ss_pred HHHh-cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCC
Confidence 9988 899888888765443332 2 2799999999997 57899999999999999986533 2445555556666
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 257 ~~~ 259 (324)
T cd08292 257 ATV 259 (324)
T ss_pred CEE
Confidence 653
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-20 Score=135.24 Aligned_cols=137 Identities=25% Similarity=0.228 Sum_probs=119.2
Q ss_pred cccceeEECCCCCCcc--cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 3 ADEHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~~~~~~p~~~~~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
++.+.+.++++..-+. ....|.+++.|||.++.+.++.++|++|+|-+| |++|..+.|++|..|++|+.++.+++|.
T Consensus 109 ~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~ 188 (340)
T COG2130 109 SDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC 188 (340)
T ss_pred echhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH
Confidence 3455677776432222 223788999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+++.+|.+..+||+..+..+.+. .++|+.||++|++ .++..+..|+..+|++.||..+
T Consensus 189 ~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS 252 (340)
T COG2130 189 DFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAIS 252 (340)
T ss_pred HHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehh
Confidence 9999999999999999987666654 3999999999999 7999999999999999999654
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=135.39 Aligned_cols=154 Identities=34% Similarity=0.435 Sum_probs=127.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++.+++.+.|||+++.....++++++++|+|+|++|++++++++..|.+|+++++++++.+.
T Consensus 94 ~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 94 VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred EechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 46778999999999999999999999999999988887789999999999559999999999999999999999999998
Q ss_pred HHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccC-ccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~ 156 (173)
+++ +|.+.+++....+....+ .+++|+++++++.......++++++++|+++.+|......... ....+.++..
T Consensus 174 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~ 252 (271)
T cd05188 174 AKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELT 252 (271)
T ss_pred HHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceE
Confidence 877 888888877654443332 3489999999998446889999999999999999765433222 3445566665
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=141.23 Aligned_cols=143 Identities=21% Similarity=0.227 Sum_probs=111.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++. +.+ ....|||+++.+. . .++++++|+|+|++|++++|+++.+|++ |++++.+++|++
T Consensus 108 ~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~ 183 (308)
T TIGR01202 108 VTPASRVCRLDPALGPQG-ALL-ALAATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRD 183 (308)
T ss_pred EcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 568889999999998764 444 4578999999764 2 4688999999999999999999999996 556667776766
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
.+.+ + .++|+.+. ...++|++|||+|++..++.++++++++|+++.+|...+..+++...++.++.++
T Consensus 184 ~a~~-~---~~i~~~~~-----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i 251 (308)
T TIGR01202 184 GATG-Y---EVLDPEKD-----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARL 251 (308)
T ss_pred hhhh-c---cccChhhc-----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEE
Confidence 5544 3 34554321 2347999999999986789999999999999999976655677777777777653
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-19 Score=143.21 Aligned_cols=153 Identities=20% Similarity=0.286 Sum_probs=124.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|.++++++|+++++++++.+++.+.|||+++... ..++++++|+|+|+ |++|++++++++.+|+++++++++++|
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~ 230 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK 230 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 467789999999999999999999999999998754 45688999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCCh-------------------------HHHHHhcC---CccEEEEcCCCccchHHHHHhhhcC
Q 030694 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQ 130 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~-------------------------~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~ 130 (173)
++.+++ +|++.+++++.. +.+.++.+ ++|++|||+|+. .+..++++++++
T Consensus 231 ~~~~~~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~ 308 (393)
T cd08246 231 AEYCRA-LGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRG 308 (393)
T ss_pred HHHHHH-cCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccC
Confidence 999988 999888886432 11122222 699999999986 688999999999
Q ss_pred CEEEEeCCCCC-CcccCccccccCccc
Q 030694 131 GKLVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 131 G~~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
|+++.+|...+ ...++...+..++..
T Consensus 309 G~~v~~g~~~~~~~~~~~~~l~~~~~~ 335 (393)
T cd08246 309 GMVVICAGTTGYNHTYDNRYLWMRQKR 335 (393)
T ss_pred CEEEEEcccCCCCCCCcHHHHhhheeE
Confidence 99999986543 234455555544443
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=140.17 Aligned_cols=148 Identities=25% Similarity=0.354 Sum_probs=123.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+||+++.....++++++++|+|+|++|++++++++.+|++ |++++++++|++
T Consensus 143 ~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~ 222 (365)
T cd05279 143 VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFE 222 (365)
T ss_pred EecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4677899999999999999999999999999987777779999999998899999999999999995 777788999999
Q ss_pred HHHHHcCCCEEeeCCCh--HHHH---Hh-cCCccEEEEcCCCccchHHHHHhhh-cCCEEEEeCCCC--CCcccCcccc
Q 030694 81 EAVERLGADSFLVSRDQ--DEMQ---AA-MGTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE--KPLELPAFPL 150 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~~---~~-~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~ 150 (173)
.+++ +|.+++++..+. +..+ +. .+++|++||++|....+..++++++ ++|+++.+|... ....++...+
T Consensus 223 ~~~~-~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 300 (365)
T cd05279 223 KAKQ-LGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL 300 (365)
T ss_pred HHHH-hCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH
Confidence 9977 999888877654 3222 22 2489999999997557889999999 999999998653 3456666665
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=138.50 Aligned_cols=164 Identities=24% Similarity=0.272 Sum_probs=130.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC--CcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST--SPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~--~~~~~ 79 (173)
+++.+.++++|+++++++++ ++..+.+||+++.....++++++|+|.|+|.+|.+++++++..|++|+.+.. ++++.
T Consensus 125 ~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~ 203 (306)
T cd08258 125 LVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRL 203 (306)
T ss_pred EcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 46778999999999999876 8888899999998877789999999987799999999999999999887743 44467
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+.+++ +|.+.+ ++...+..+++ . +++|++||++|....+...+++|+++|+++.+|...+ ...++...++++
T Consensus 204 ~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 281 (306)
T cd08258 204 DVAKE-LGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQK 281 (306)
T ss_pred HHHHH-hCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhc
Confidence 77777 898777 76654433332 2 3799999999876578899999999999999997652 356777778878
Q ss_pred cccceeeeccccccCCC
Q 030694 154 EEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (173)
+++ +.+.+.++++|+
T Consensus 282 ~~~--i~g~~~~~~~~~ 296 (306)
T cd08258 282 ELS--VIGSRSSTPASW 296 (306)
T ss_pred CcE--EEEEecCchHhH
Confidence 776 556666666654
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=138.43 Aligned_cols=154 Identities=28% Similarity=0.358 Sum_probs=125.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||+++.....+.++++|+|+|+|.+|.+++|+++..|+ +|+++++++++.+
T Consensus 135 ~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~ 214 (350)
T cd08240 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214 (350)
T ss_pred EecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 456678899999999999999999999999999888776789999999889999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+.+ +|.+.+++....+..++ .. +++|++||++|....+..++++|+++|+++.+|...+...++...+.+++..
T Consensus 215 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08240 215 AAKA-AGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALT 293 (350)
T ss_pred HHHH-hCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcE
Confidence 9977 99888888765433222 22 3799999999976578999999999999999987655434444444444444
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-19 Score=139.33 Aligned_cols=139 Identities=26% Similarity=0.375 Sum_probs=117.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.+++++.|||+++.....++++++|+|+|+|++|++++++++.+|+ +|++++++++|++
T Consensus 150 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 229 (373)
T cd08299 150 VVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFA 229 (373)
T ss_pred EecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998777777999999999889999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCChH--H---HHHh-cCCccEEEEcCCCccchHHHHHhh-hcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQD--E---MQAA-MGTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~ 141 (173)
.+++ +|++.++++.+.+ . +.+. .+++|+++||+|.+..+..++..+ +++|+++.+|....
T Consensus 230 ~a~~-lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~ 296 (373)
T cd08299 230 KAKE-LGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296 (373)
T ss_pred HHHH-cCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence 9977 9998888875422 2 2222 247999999999865677766655 57999999997643
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=137.24 Aligned_cols=153 Identities=23% Similarity=0.260 Sum_probs=125.1
Q ss_pred cccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchH
Q 030694 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~ 79 (173)
++.+ .++++|++++.++++.+++.+.|||+++.....+.++++++|.|+|.+|.+++|+++.+| .+|++++++++|.
T Consensus 125 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~ 204 (345)
T cd08286 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRL 204 (345)
T ss_pred cccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4555 899999999999999999999999998766667789999999988999999999999999 6999988888888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++...+...+ .. .++|++|||+|....++.++++++++|+++.+|.......++...++.++
T Consensus 205 ~~~~~-~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 283 (345)
T cd08286 205 EVAKK-LGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKN 283 (345)
T ss_pred HHHHH-hCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcC
Confidence 88887 99988888765433222 22 37999999999876788899999999999999965544555655555555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 284 ~~ 285 (345)
T cd08286 284 IT 285 (345)
T ss_pred cE
Confidence 54
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=138.83 Aligned_cols=154 Identities=25% Similarity=0.446 Sum_probs=126.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.++.++.|||+++.....+.++++++|+|+|.+|.+++++++..|++ +++++.++++.+
T Consensus 147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~ 226 (367)
T cd08263 147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA 226 (367)
T ss_pred EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4567899999999999999999999999999998887778999999998799999999999999997 988989999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
.+++ +|.+.++++...++.+++ . .++|++||++++......++++++++|+++.+|..+. ...++...++.+
T Consensus 227 ~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 305 (367)
T cd08263 227 KAKE-LGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR 305 (367)
T ss_pred HHHH-hCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence 8877 999889888765443332 2 3799999999987457899999999999999986543 234554554444
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 306 ~~~ 308 (367)
T cd08263 306 GIK 308 (367)
T ss_pred CeE
Confidence 443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=137.27 Aligned_cols=154 Identities=33% Similarity=0.415 Sum_probs=127.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
+++.+.++++|++++.++++.++..+.|||+++.....++++++++|.|+|.+|.+++++++..|++|+++++++++.+.
T Consensus 125 ~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~ 204 (338)
T cd08254 125 VVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLEL 204 (338)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 45678899999999999999999999999999988887899999999887999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|.+.+++......... . .+++|+++||+|....+..++++|+++|+++.+|.......++...++.++..
T Consensus 205 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 282 (338)
T cd08254 205 AKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELR 282 (338)
T ss_pred HHH-hCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccE
Confidence 977 89888877665332221 1 23799999999877678899999999999999986554445555555555554
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-19 Score=135.96 Aligned_cols=153 Identities=37% Similarity=0.611 Sum_probs=126.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.++..+.|||+++... .++++++++|+|+ +.+|.+++++++.+|++|+++.+++++.+
T Consensus 126 ~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 126 IADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred EeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998775 5689999999998 67999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++ . +++|+++|+.+.......++++++++|+++.+|..+.. .+++...++.++
T Consensus 205 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08297 205 LAKE-LGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRG 283 (341)
T ss_pred HHHH-cCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcc
Confidence 9876 999888888765443332 2 37999999877666788999999999999999865532 245555555555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 284 ~~ 285 (341)
T cd08297 284 IT 285 (341)
T ss_pred cE
Confidence 54
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-20 Score=155.10 Aligned_cols=160 Identities=21% Similarity=0.259 Sum_probs=135.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+++|.+|...++++|+..|+.|.|||+++...++.++|+++||+++ |++|.+++.++.++|++|+.++.+.+|++
T Consensus 1512 l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRe 1591 (2376)
T KOG1202|consen 1512 LASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKRE 1591 (2376)
T ss_pred hcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHH
Confidence 45678999999999999999999999999999999999999999999966 99999999999999999999999999999
Q ss_pred HHHHHcC---CCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccC-ccccc
Q 030694 81 EAVERLG---ADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLL 151 (173)
Q Consensus 81 ~~~~~~g---~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~ 151 (173)
++++.|. ...+-|.++.++.+-+. +|+|+|++....+ .++.+++||+..||+..+|-.+-+.+.+ .+..+
T Consensus 1592 fL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavf 1670 (2376)
T KOG1202|consen 1592 FLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVF 1670 (2376)
T ss_pred HHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhh
Confidence 9999776 56677877766544332 2999999999998 5999999999999999999655333333 35677
Q ss_pred cCcccceeeec
Q 030694 152 TGEEEDSWWQS 162 (173)
Q Consensus 152 ~~~~~~~~~~~ 162 (173)
.++.+++....
T Consensus 1671 LkNvsfHGiLL 1681 (2376)
T KOG1202|consen 1671 LKNVSFHGILL 1681 (2376)
T ss_pred hcccceeeeeh
Confidence 77877666543
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-19 Score=134.97 Aligned_cols=154 Identities=22% Similarity=0.310 Sum_probs=123.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhC---CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG---LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|++.++++|+++++++++.+++++.|||+++.... ....+++|+|+|+ |.+|.+++++++.+|++|++++++++
T Consensus 103 ~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (326)
T cd08289 103 RVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD 182 (326)
T ss_pred EEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence 4677899999999999999999999999998885432 2345789999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+++.+++ +|.+.++++.+.. .+.+.. +++|++||++|+. .+...+++++++|+++.+|.... ..+++...++.+
T Consensus 183 ~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~ 260 (326)
T cd08289 183 AADYLKK-LGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILR 260 (326)
T ss_pred HHHHHHH-cCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhc
Confidence 9999987 9998888776532 122222 3799999999986 68999999999999999996543 234445555555
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
+...
T Consensus 261 ~~~~ 264 (326)
T cd08289 261 GVNL 264 (326)
T ss_pred cceE
Confidence 5543
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.2e-19 Score=135.32 Aligned_cols=135 Identities=19% Similarity=0.313 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~ 74 (173)
+++++.++++|+++++++++.+++++.|||+++.....+.+ +++|+|+|+ |++|.+++|+++.+ |++|+++++
T Consensus 103 ~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~ 182 (336)
T TIGR02817 103 LVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182 (336)
T ss_pred EEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence 46778899999999999999999999999999977666666 999999997 99999999999998 999999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh--HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
++++.+.+++ +|+++++++... ..+.+.. +++|+++|++++.......+++++++|+++.++
T Consensus 183 ~~~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~ 247 (336)
T TIGR02817 183 RPESQEWVLE-LGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALID 247 (336)
T ss_pred cHHHHHHHHH-cCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEc
Confidence 9999999977 999999885541 2222232 379999999876557889999999999999885
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.7e-19 Score=135.49 Aligned_cols=149 Identities=28% Similarity=0.360 Sum_probs=123.4
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 86 (173)
+++++|++++.++++.++..+.|||+++.....+.++++++|+|+|.+|.+++++++..|++|+++.+++++.+.+++ +
T Consensus 130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~ 208 (345)
T cd08260 130 NLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-L 208 (345)
T ss_pred ceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-h
Confidence 899999999999999999999999999877677789999999999999999999999999999999999999999987 9
Q ss_pred CCCEEeeCCC-hHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC---cccCccccccCccc
Q 030694 87 GADSFLVSRD-QDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP---LELPAFPLLTGEEE 156 (173)
Q Consensus 87 g~~~v~~~~~-~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~ 156 (173)
|.+.++++.. .+..+.+ . +++|++|||+|........+++++++|+++.+|..... ..++...++.++..
T Consensus 209 g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 286 (345)
T cd08260 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELE 286 (345)
T ss_pred CCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccE
Confidence 9998988876 4433332 2 27999999999755688999999999999999965432 34444444444443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=133.49 Aligned_cols=153 Identities=22% Similarity=0.256 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||+++.....+.++++++|+|+ |.+|.+++++++.+|++++++.+++++++
T Consensus 98 ~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 177 (323)
T cd05282 98 VAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE 177 (323)
T ss_pred ecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence 45677899999999999999999999999999988777789999999998 89999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++. .++|+++||+|+. .....+++++++|+++.+|.... ...++...+..++
T Consensus 178 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 255 (323)
T cd05282 178 ELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKD 255 (323)
T ss_pred HHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcC
Confidence 9977 9998888887654433332 3799999999998 46788999999999999986544 2345555554355
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 256 ~~ 257 (323)
T cd05282 256 IT 257 (323)
T ss_pred ce
Confidence 44
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=134.08 Aligned_cols=153 Identities=27% Similarity=0.478 Sum_probs=122.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.++..+.|||+++ ....++++++|+|+|+|++|.+++++++. .|++|+++++++++++
T Consensus 123 ~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~ 201 (338)
T PRK09422 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLA 201 (338)
T ss_pred EEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 456778999999999999999999999999998 44556999999999999999999999998 4999999999999999
Q ss_pred HHHHHcCCCEEeeCCC-hH---HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRD-QD---EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~---~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.++++.. .+ .+.+..+++|.++.+.+....+..++++++++|+++.+|.......++...+..+...
T Consensus 202 ~~~~-~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 280 (338)
T PRK09422 202 LAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIE 280 (338)
T ss_pred HHHH-cCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcE
Confidence 9977 99988888754 22 2333345789555555555578999999999999999986544444555455545444
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=134.78 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=115.1
Q ss_pred ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH
Q 030694 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (173)
..++++|+++++++++.++..+.|||+++.. ..++++++|+|+|+|++|++++|+++.+|+ +|+++++++++.+.+++
T Consensus 131 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~ 209 (351)
T cd08285 131 ANLAPLPDGLTDEQAVMLPDMMSTGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE 209 (351)
T ss_pred CceEECCCCCCHHHhhhhccchhhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 3799999999999999999999999999744 456899999999889999999999999999 58888899999988888
Q ss_pred HcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 85 RLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 85 ~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+|.+.++++...+..++ .. .++|+++||+|+...+..++++++++|+++.+|....
T Consensus 210 -~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 210 -YGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred -cCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence 99998988765443332 22 3799999999987678999999999999999997654
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=132.10 Aligned_cols=153 Identities=24% Similarity=0.292 Sum_probs=124.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCC--C-CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.+|.++++++|+++++++++.+++.+.|||+++...... . .+++|+|+|+ |.+|++++++++.+|++|++++++++
T Consensus 103 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (325)
T cd05280 103 RVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182 (325)
T ss_pred EEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 567789999999999999999999999999998665432 4 4579999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+++.+++ +|.++++++.+.. ..+... +++|++||++|+. .+...+++++++|+++.+|.... +..++...++.+
T Consensus 183 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 260 (325)
T cd05280 183 QADYLKS-LGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILR 260 (325)
T ss_pred HHHHHHh-cCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheee
Confidence 9999987 9998888766432 122222 3799999999997 68999999999999999996543 234555555455
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 261 ~~~ 263 (325)
T cd05280 261 GVS 263 (325)
T ss_pred eeE
Confidence 554
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=134.37 Aligned_cols=154 Identities=22% Similarity=0.290 Sum_probs=125.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---- 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---- 76 (173)
.+|.++++++|+++++++++.+++.+.|||+++.....++++++|+|+|+ |++|++++++++..|++++++..++
T Consensus 106 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (341)
T cd08290 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLE 185 (341)
T ss_pred eccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcch
Confidence 46778999999999999999999999999999987777789999999998 9999999999999999999988876
Q ss_pred chHHHHHHHcCCCEEeeCCCh---HHHHH---hcC-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcc
Q 030694 77 SKKSEAVERLGADSFLVSRDQ---DEMQA---AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF 148 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~---~~~~~---~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 148 (173)
++.+.+++ +|+++++++... +..+. ..+ ++|++|||+|+. .+...+++++++|+++.+|.... ...++..
T Consensus 186 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 263 (341)
T cd08290 186 ELKERLKA-LGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTS 263 (341)
T ss_pred hHHHHHHh-cCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHH
Confidence 56788876 999998887653 33222 222 699999999998 57789999999999999985432 3345554
Q ss_pred ccccCcccc
Q 030694 149 PLLTGEEED 157 (173)
Q Consensus 149 ~~~~~~~~~ 157 (173)
.++.++..+
T Consensus 264 ~~~~~~~~~ 272 (341)
T cd08290 264 LLIFKDITL 272 (341)
T ss_pred HHhhCCceE
Confidence 556666653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=134.99 Aligned_cols=151 Identities=25% Similarity=0.277 Sum_probs=120.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++++.++++|+++++++++.+ ..+.+|++++ ....++++++++|.|+|++|.+++++++.+|++ |+++.+++++.+
T Consensus 124 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~ 201 (343)
T cd05285 124 NHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLE 201 (343)
T ss_pred EecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4667889999999999998766 5778899987 556669999999998899999999999999997 899988999998
Q ss_pred HHHHHcCCCEEeeCCChHH------HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQDE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~------~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (173)
.+++ +|++.++++.+.+. +.+.. +++|++|||+|....+...+++++++|+++.+|..+....++...+..
T Consensus 202 ~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 280 (343)
T cd05285 202 FAKE-LGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASL 280 (343)
T ss_pred HHHH-cCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhh
Confidence 8877 89999888775432 22222 269999999998656889999999999999998654433444444444
Q ss_pred Ccc
Q 030694 153 GEE 155 (173)
Q Consensus 153 ~~~ 155 (173)
+..
T Consensus 281 ~~~ 283 (343)
T cd05285 281 REI 283 (343)
T ss_pred CCc
Confidence 444
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=134.71 Aligned_cols=151 Identities=25% Similarity=0.261 Sum_probs=121.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++++++++.|||+++. ...++++++++|+|+ |++|++++++++.+|++++++++++ +++
T Consensus 138 ~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~ 215 (350)
T cd08274 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEE 215 (350)
T ss_pred EecHHHceeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhH
Confidence 4567789999999999999999999999999984 455689999999998 9999999999999999999888765 788
Q ss_pred HHHHHcCCCEEeeCCChHHHH-Hh-c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQ-AA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~-~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.+++........ .. . +++|++||++|+. .+..++++++++|+++.+|...+. ..++...++.++..
T Consensus 216 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08274 216 AVRA-LGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLT 293 (350)
T ss_pred HHHh-cCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceE
Confidence 8876 9987666654432211 11 2 3799999999987 689999999999999999865443 45666665666654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=133.51 Aligned_cols=153 Identities=26% Similarity=0.390 Sum_probs=126.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.|||.++.....+.++++++|+|+|.+|.+++++++..|++ |+++.+++++.+
T Consensus 142 ~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~ 221 (363)
T cd08279 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE 221 (363)
T ss_pred EeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 4677899999999999999999999999999988777789999999997799999999999999995 999999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~ 153 (173)
.+++ +|.++++++...+...+ .. +++|+++|++++...+...+++++++|+++.+|..+ ....++...+..+
T Consensus 222 ~~~~-~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 300 (363)
T cd08279 222 LARR-FGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLS 300 (363)
T ss_pred HHHH-hCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhc
Confidence 8876 99988888766443333 32 379999999997657889999999999999998654 2345555555444
Q ss_pred cc
Q 030694 154 EE 155 (173)
Q Consensus 154 ~~ 155 (173)
..
T Consensus 301 ~~ 302 (363)
T cd08279 301 EK 302 (363)
T ss_pred Cc
Confidence 33
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=130.91 Aligned_cols=137 Identities=25% Similarity=0.313 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.|||+++.....++++++++|+|+ |++|.+++++++.+|++|+++++++++.+
T Consensus 102 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 102 LVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred EcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999988887799999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+++++... .+.+.+..+++|+++|++|+. .+...+++++++|+++.+|...
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (320)
T cd08243 182 LLKE-LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLG 241 (320)
T ss_pred HHHh-cCCcEEEecCccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCCEEEEEccCC
Confidence 9977 99888765422 122333334899999999986 6899999999999999998643
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-18 Score=131.97 Aligned_cols=151 Identities=23% Similarity=0.290 Sum_probs=125.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|.++++++|++++.++++.+++++.|||+++.....++++++++|+|+ |.+|++++++++.+|++++++.+++++.+
T Consensus 100 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred EecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778999999999999999999999999999988777799999999997 99999999999999999888999999999
Q ss_pred HHHHHcCCCEEeeCCChH-HHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-Ccc-cCcccccc
Q 030694 81 EAVERLGADSFLVSRDQD-EMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLE-LPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~-~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~ 152 (173)
.+++ +|.+.++++...+ ..++ .. .++|++||++|+. .+..++++++++|+++.+|...+ ... ++...++.
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~ 257 (334)
T PTZ00354 180 FCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLR 257 (334)
T ss_pred HHHH-cCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHh
Confidence 9977 9998888876543 3332 22 3799999999976 68899999999999999986543 222 55555554
Q ss_pred Cc
Q 030694 153 GE 154 (173)
Q Consensus 153 ~~ 154 (173)
+.
T Consensus 258 ~~ 259 (334)
T PTZ00354 258 KR 259 (334)
T ss_pred hC
Confidence 54
|
|
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-18 Score=130.27 Aligned_cols=153 Identities=24% Similarity=0.304 Sum_probs=122.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC--CCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~~g~-~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.+|.+.++++|+++++++++.+++.+.+|+.++..... +.+++ +++|+|+ |.+|.+++++++.+|++++++..+++
T Consensus 102 ~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~ 181 (323)
T TIGR02823 102 RVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAE 181 (323)
T ss_pred EEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 46778999999999999999999999999888754332 57888 9999998 99999999999999999999988888
Q ss_pred hHHHHHHHcCCCEEeeCCChHH-HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDE-MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~-~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
+.+.+++ +|.+.+++..+.+. ..... +++|.++||+|+. .+...+++++++|+++.+|.... ...++...++.++
T Consensus 182 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 259 (323)
T TIGR02823 182 EEDYLKE-LGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRG 259 (323)
T ss_pred HHHHHHh-cCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcc
Confidence 8888876 99888887655332 22332 3699999999988 58899999999999999996543 2334445554555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 260 ~~ 261 (323)
T TIGR02823 260 VS 261 (323)
T ss_pred eE
Confidence 54
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=130.49 Aligned_cols=153 Identities=25% Similarity=0.285 Sum_probs=124.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+++.+.|||. +.....++++++++|+|+ |.+|.+++++++.+|++|+++++++++.+
T Consensus 103 ~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 103 VADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred EEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4677899999999999999999999999964 444556689999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+.+ . .++|+++|++|+. ....++++++++|+++.+|..+.. ..++...++.++
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 259 (324)
T cd08244 182 LVRA-LGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRG 259 (324)
T ss_pred HHHH-cCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCC
Confidence 9977 998888887665433332 2 2799999999998 478999999999999999865432 244544555555
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 260 ~~~ 262 (324)
T cd08244 260 VTV 262 (324)
T ss_pred cEE
Confidence 543
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-18 Score=131.35 Aligned_cols=150 Identities=26% Similarity=0.314 Sum_probs=119.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++++ ++++|+++++++++.+ ..+.++++++ ....+.++++|||+|+|.+|.+++++++.+|++|+++.+++++.+.
T Consensus 122 ~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~ 198 (337)
T cd08261 122 VVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEF 198 (337)
T ss_pred Eechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHH
Confidence 46677 9999999999998866 5677888887 5566789999999988999999999999999999999999999998
Q ss_pred HHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 82 AVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
+++ +|.++++++...+..+. .. .++|+++||+|+...+..++++|+++|+++.+|..+....++...+..+..
T Consensus 199 ~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~ 276 (337)
T cd08261 199 ARE-LGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKEL 276 (337)
T ss_pred HHH-hCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCC
Confidence 877 89999988876443332 22 269999999988657889999999999999998655433444444444443
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-18 Score=136.30 Aligned_cols=152 Identities=21% Similarity=0.237 Sum_probs=123.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHh--hCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
+++.++++++|+++++++++.+.+.+.|||+++.. ...+.++++++|+|+ |.+|++++++++.+|++++++++++++
T Consensus 147 ~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~ 226 (398)
T TIGR01751 147 LVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK 226 (398)
T ss_pred EechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 46678899999999999999999999999999865 355688999999998 999999999999999999998888999
Q ss_pred HHHHHHHcCCCEEeeCCChH----------------------H---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCC
Q 030694 79 KSEAVERLGADSFLVSRDQD----------------------E---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQG 131 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~----------------------~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G 131 (173)
.+.+++ +|++.++|+...+ + +.+.. +++|++|||+|.. .+...+++++++|
T Consensus 227 ~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G 304 (398)
T TIGR01751 227 AEYCRE-LGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGG 304 (398)
T ss_pred HHHHHH-cCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCC
Confidence 999988 9999998875421 1 11122 3699999999976 6889999999999
Q ss_pred EEEEeCCCCCC-cccCccccccCcc
Q 030694 132 KLVLLGAPEKP-LELPAFPLLTGEE 155 (173)
Q Consensus 132 ~~v~~g~~~~~-~~~~~~~~~~~~~ 155 (173)
+++.+|..++. ..++...+..+..
T Consensus 305 ~~v~~g~~~~~~~~~~~~~~~~~~~ 329 (398)
T TIGR01751 305 MVVICGGTTGYNHDYDNRYLWMRQK 329 (398)
T ss_pred EEEEEccccCCCCCcCHHHHhhccc
Confidence 99999976542 3444444444443
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=131.98 Aligned_cols=148 Identities=22% Similarity=0.313 Sum_probs=118.9
Q ss_pred ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH
Q 030694 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (173)
+.++++|+++++++++++++++.|||+++.. ..+.++++|+|+|+|.+|.+++++++.+|+ +|+++++++++.+.+++
T Consensus 132 ~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~ 210 (344)
T cd08284 132 GTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA 210 (344)
T ss_pred CceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4999999999999999999999999999976 456889999999889999999999999997 89999888888888877
Q ss_pred HcCCCEEeeCCChHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCccc
Q 030694 85 RLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 85 ~~g~~~v~~~~~~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
+|+. .++....++ +.++. +++|++||++|+...+...+++++++|+++.+|..+. ....+....+.++..
T Consensus 211 -~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 286 (344)
T cd08284 211 -LGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLT 286 (344)
T ss_pred -hCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcE
Confidence 9975 455554333 22222 3799999999986678899999999999999996653 233444445555554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=131.27 Aligned_cols=151 Identities=20% Similarity=0.142 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCe-EEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~-v~~~~~~~~~~ 79 (173)
+++.+.++++|+++++++++ +...+.+++++.. ...++++++|+|+|+|++|++++|+++. +|++ +++++++++|.
T Consensus 122 ~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~ 199 (339)
T PRK10083 122 VVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERL 199 (339)
T ss_pred EechHHeEECcCCCCHHHHh-hhchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH
Confidence 46778899999999988765 6677788886554 4456899999999999999999999996 6995 77788888999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhcC---CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
+.+++ +|++.++++.+.+..+.+.+ ++|++||++|....+..++++++++|+++.+|.......++...+..+..
T Consensus 200 ~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (339)
T PRK10083 200 ALAKE-SGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKEL 277 (339)
T ss_pred HHHHH-hCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcce
Confidence 88888 99999988776544444432 46799999997667899999999999999999655433344444443433
|
|
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-18 Score=131.21 Aligned_cols=138 Identities=22% Similarity=0.311 Sum_probs=116.2
Q ss_pred ccccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch
Q 030694 2 VADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~ 78 (173)
+++.+ +++++|++++.++++.+++++.|||+++ ....++++++|+|.|+|.+|.+++|+++.+|+ +++++++++++
T Consensus 126 ~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~ 204 (347)
T cd05278 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPER 204 (347)
T ss_pred EecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 34555 8999999999999999999999999998 45567899999998779999999999999997 88888888888
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.+++ +|.+.++++...+..+.+ . +++|++||++|+...+..++++|+++|+++.+|...+
T Consensus 205 ~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 271 (347)
T cd05278 205 LDLAKE-AGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK 271 (347)
T ss_pred HHHHHH-hCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 888887 898889888765443332 2 3799999999985468899999999999999985543
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.1e-18 Score=129.75 Aligned_cols=151 Identities=23% Similarity=0.305 Sum_probs=119.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.++++. ..++++||+++.....+ ++++|+|.|+|.+|.+++++++.+|+ +++++++++++.+
T Consensus 127 ~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~ 204 (339)
T cd08232 127 VVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA 204 (339)
T ss_pred EechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 467788999999999988764 67888999999887775 89999998889999999999999999 8999998888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.++++...+ ..+. .+++|+++|++|+...++..+++|+++|+++.+|..+.....+...++.++..
T Consensus 205 ~~~~-~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 281 (339)
T cd08232 205 VARA-MGADETVNLARDP-LAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELD 281 (339)
T ss_pred HHHH-cCCCEEEcCCchh-hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceE
Confidence 7777 8988888876544 2222 23699999999975568899999999999999985443333344444444443
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-18 Score=132.88 Aligned_cols=152 Identities=21% Similarity=0.171 Sum_probs=120.0
Q ss_pred cccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
++.+ .++++|+++++++++.++..+.|||+++ ....+.++++|+|+|+|.+|.+++++++..|+ +|+++++++++.
T Consensus 144 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~ 222 (386)
T cd08283 144 VPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL 222 (386)
T ss_pred cccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4555 8999999999999999999999999999 55667899999999889999999999999998 599999999999
Q ss_pred HHHHHHcCCCEEeeCCChH-HHHHh---c--CCccEEEEcCCCc---------------------cchHHHHHhhhcCCE
Q 030694 80 SEAVERLGADSFLVSRDQD-EMQAA---M--GTMDGIIDTVSAV---------------------HPLMPLIGLLKSQGK 132 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~-~~~~~---~--~~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~ 132 (173)
+.+++ ++...++++...+ ..+.+ . +++|++||++|+. ..+..++++++++|+
T Consensus 223 ~~~~~-~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 301 (386)
T cd08283 223 EMARS-HLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT 301 (386)
T ss_pred HHHHH-cCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCE
Confidence 99998 6433567766542 33333 2 2799999999863 246789999999999
Q ss_pred EEEeCCCCC-CcccCccccccCccc
Q 030694 133 LVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 133 ~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
++.+|.... ...++...++.+...
T Consensus 302 iv~~g~~~~~~~~~~~~~~~~~~~~ 326 (386)
T cd08283 302 VSIIGVYGGTVNKFPIGAAMNKGLT 326 (386)
T ss_pred EEEEcCCCCCcCccCHHHHHhCCcE
Confidence 999986554 233444444555554
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.3e-18 Score=133.03 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=107.0
Q ss_pred ccccc--eeEECCCCCCc----ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeE-EEEeC
Q 030694 2 VADEH--FVVRIPEGAPL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV-TVIST 74 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v-~~~~~ 74 (173)
++|.. .++++|++++. ++++++.+.+.++|+++.+ ..++++++|+|.|+|++|++++|+++.+|+++ +++++
T Consensus 140 ~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~ 218 (393)
T TIGR02819 140 MVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDL 218 (393)
T ss_pred EechhhCceEECCCcccccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Confidence 45543 69999998653 3567888899999999876 45589999999888999999999999999974 44567
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh---HHHHHhcC--CccEEEEcCCCc--------------cchHHHHHhhhcCCEEEE
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~ 135 (173)
+++|++.+++ +|++.+.+..+. +.+.+..+ ++|++||++|.+ ..+++++++++++|+++.
T Consensus 219 ~~~r~~~a~~-~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~ 297 (393)
T TIGR02819 219 NPARLAQARS-FGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI 297 (393)
T ss_pred CHHHHHHHHH-cCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence 7889999998 998754332222 22333332 799999999986 368999999999999999
Q ss_pred eCCC
Q 030694 136 LGAP 139 (173)
Q Consensus 136 ~g~~ 139 (173)
+|..
T Consensus 298 ~G~~ 301 (393)
T TIGR02819 298 PGLY 301 (393)
T ss_pred eeec
Confidence 9986
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=128.69 Aligned_cols=152 Identities=22% Similarity=0.309 Sum_probs=124.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~ 74 (173)
.++.++++++|++++.++++.+++.+.|||+++.+...+.+ +++++|+|+ |++|++++++++.+| ++|+++++
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~ 183 (336)
T cd08252 104 LVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATAS 183 (336)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcC
Confidence 45778899999999999999999999999999877666666 999999997 999999999999999 89999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh--HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
++++.+.+++ +|.++++++... ..+.... +++|++||++|+...+..++++++++|+++.+|... ..++...+.
T Consensus 184 ~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~ 260 (336)
T cd08252 184 RPESIAWVKE-LGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLK 260 (336)
T ss_pred ChhhHHHHHh-cCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--Ccccchhhh
Confidence 9999999977 999888887641 1222222 379999999997557899999999999999998543 344555554
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
.++..
T Consensus 261 ~~~~~ 265 (336)
T cd08252 261 SKSAS 265 (336)
T ss_pred cccce
Confidence 45554
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.4e-18 Score=129.64 Aligned_cols=139 Identities=30% Similarity=0.336 Sum_probs=117.0
Q ss_pred cccc-ceeEECCCCCC--cccccc-hhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADE-HFVVRIPEGAP--LDATAP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.++. +.++++|++++ ++++++ +++.+.|||+++.....+.++++++|+|+ |++|.+++++++..|++|+++++++
T Consensus 101 ~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 101 VVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred EecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 4577 88999999985 444445 99999999999988777789999999997 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++.+.+++.+|.+.++++.+.+..+++. +++|++|||+|+. .+..++++++++|+++.+|..+.
T Consensus 181 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 248 (329)
T cd05288 181 EKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQ 248 (329)
T ss_pred HHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccC
Confidence 9988887768988888877654433322 4799999999987 68899999999999999986543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.7e-18 Score=130.73 Aligned_cols=152 Identities=20% Similarity=0.253 Sum_probs=120.7
Q ss_pred ccccce-----eEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCC
Q 030694 2 VADEHF-----VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTS 75 (173)
Q Consensus 2 ~~~~~~-----~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~ 75 (173)
++|.++ ++++|+++++++++.+ ..+.+||+++... .++++++|+|+|+|.+|.+++++++..|++ |+++.++
T Consensus 122 ~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s 199 (343)
T cd08235 122 RVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLN 199 (343)
T ss_pred EecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 345556 9999999999988765 7889999999765 679999999998899999999999999998 9888899
Q ss_pred cchHHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC--cccCcc
Q 030694 76 PSKKSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAF 148 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~ 148 (173)
+++.+.+++ +|.++++++.+.+..+++ . +++|+++||+++...+...+++++++|+++.+|..... ..++..
T Consensus 200 ~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 278 (343)
T cd08235 200 EFRLEFAKK-LGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPN 278 (343)
T ss_pred HHHHHHHHH-hCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHH
Confidence 999998876 898888888765543332 2 26999999999765688999999999999999864432 334434
Q ss_pred ccccCccc
Q 030694 149 PLLTGEEE 156 (173)
Q Consensus 149 ~~~~~~~~ 156 (173)
.+..+...
T Consensus 279 ~~~~~~~~ 286 (343)
T cd08235 279 LIHYREIT 286 (343)
T ss_pred HHhhCceE
Confidence 44444443
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=128.23 Aligned_cols=152 Identities=45% Similarity=0.727 Sum_probs=123.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.++++++|+++++++++.+++.+.|||+++.. ..++++++++|+|+|.+|.+++++++..|++|+++.+++++.+.
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~ 201 (330)
T cd08245 123 VADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKREL 201 (330)
T ss_pred EEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999976 45689999999988889999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCcc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEE 155 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 155 (173)
+++ +|.+.+++....+......+++|+++++++.......++++++++|+++.+|..... ..++..+++.++.
T Consensus 202 ~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~ 275 (330)
T cd08245 202 ARK-LGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQ 275 (330)
T ss_pred HHH-hCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCC
Confidence 977 898888776544333323347999999988766788999999999999999865332 2222344444444
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.4e-18 Score=129.61 Aligned_cols=138 Identities=26% Similarity=0.276 Sum_probs=117.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEE
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 70 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~ 70 (173)
.+|.+.++++|+++++++++.+++.+.|||+++.....+ .++++++|+|+ |.+|++++++++..|++|+
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~ 183 (339)
T cd08249 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVI 183 (339)
T ss_pred EechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEE
Confidence 467788999999999999999999999999998765433 68999999998 8999999999999999999
Q ss_pred EEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhc--CCEEEEeCCCCC
Q 030694 71 VISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 71 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++. ++++++.+++ +|.+.++++...+..+.+ . +++|++||++|.+..+..+++++++ +|+++.+|....
T Consensus 184 ~~~-~~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 184 TTA-SPKNFDLVKS-LGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred EEE-CcccHHHHHh-cCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence 888 5688888877 999889888765443333 2 3799999999985578999999999 999999986543
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=128.46 Aligned_cols=137 Identities=22% Similarity=0.293 Sum_probs=111.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++ ++..+.+||+++ ....++++++|+|+|+|++|.+++|+++.+|++ ++++++++++.+
T Consensus 123 ~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 200 (341)
T cd08262 123 LLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRA 200 (341)
T ss_pred EechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 56778999999999998776 778889999986 455668999999998899999999999999996 666777888888
Q ss_pred HHHHHcCCCEEeeCCChHHH------HHh-c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEM------QAA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~------~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.++++++...+.. ... . +++|++||++|+...+..++++++++|+++.+|....
T Consensus 201 ~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~ 268 (341)
T cd08262 201 LALA-MGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME 268 (341)
T ss_pred HHHH-cCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC
Confidence 8877 998888887654211 111 1 3799999999985467889999999999999986643
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=129.43 Aligned_cols=136 Identities=24% Similarity=0.383 Sum_probs=114.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++.+ ..+.|||+++. ...++++++|+|+|+|.+|.+++++++.+|++ |+++++++++.+
T Consensus 121 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~ 198 (343)
T cd08236 121 SVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA 198 (343)
T ss_pred EechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 4677899999999999998877 67789999987 45568999999998899999999999999997 999999988888
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.+.++++.+.. .++ ..+ ++|++|||+|....+..++++|+++|+++.+|...+
T Consensus 199 ~l~~-~g~~~~~~~~~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 262 (343)
T cd08236 199 VARE-LGADDTINPKEED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYG 262 (343)
T ss_pred HHHH-cCCCEEecCcccc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC
Confidence 8876 8988888876543 322 222 699999999876678899999999999999996544
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.3e-18 Score=130.03 Aligned_cols=148 Identities=26% Similarity=0.350 Sum_probs=118.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.+||+++.. ..++++++++|+|+ |++|++++++++.+|++|+++.+ .+
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~ 197 (325)
T cd08264 123 VVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KD 197 (325)
T ss_pred EcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HH
Confidence 45677899999999999999999999999999976 56699999999998 99999999999999999888863 36
Q ss_pred HHHHHcCCCEEeeCCCh-HHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.++++++.+. +.+.+..+++|++++++|.. .+...+++++++|+++.+|... ....++...++.+...
T Consensus 198 ~~~~-~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd08264 198 WLKE-FGADEVVDYDEVEEKVKEITKMADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQIS 273 (325)
T ss_pred HHHH-hCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcE
Confidence 6666 898888876542 22222336899999999986 7899999999999999998642 2345565555544443
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-19 Score=119.11 Aligned_cols=113 Identities=33% Similarity=0.438 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhh
Q 030694 53 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLL 127 (173)
Q Consensus 53 ~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l 127 (173)
++|++++|+++..|++|++++++++|++.+++ +|+++++++++.+..+++ .+ ++|++|||+|....++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 58999999999999999999999999999999 999999999887554444 33 7999999999777899999999
Q ss_pred hcCCEEEEeCCCC-CCcccCccccccCcccceeeeccccccC
Q 030694 128 KSQGKLVLLGAPE-KPLELPAFPLLTGEEEDSWWQSHWGVEG 168 (173)
Q Consensus 128 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (173)
+++|+++.+|... ...+++...++.++++ +.+++.++.+
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~--i~g~~~~~~~ 119 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEIT--IRGSWGGSPE 119 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEE--EEEESSGGHH
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcE--EEEEccCCHH
Confidence 9999999999887 5679999999999998 5555555543
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=126.37 Aligned_cols=144 Identities=27% Similarity=0.419 Sum_probs=119.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|+++++++++++++.+.|||+++...... ++++++|+|+ |++|.+++++++..|++|+.+++++++.+
T Consensus 93 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 171 (305)
T cd08270 93 AVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAE 171 (305)
T ss_pred EEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999887764 5999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
.+++ +|.+..++... +. ..+++|+++|++|+. ....++++++++|+++.+|.... ...++...+..
T Consensus 172 ~~~~-~g~~~~~~~~~-~~---~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 238 (305)
T cd08270 172 GLRE-LGAAEVVVGGS-EL---SGAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVG 238 (305)
T ss_pred HHHH-cCCcEEEeccc-cc---cCCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhc
Confidence 9988 99766554322 11 124799999999988 68999999999999999986543 23455554444
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=128.63 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=114.2
Q ss_pred cccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 3 ADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 3 ~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+|++ .++++|+++++++++.+ ..+.|+|+++ ....++++++|+|.|+|.+|.+++++++.+|++ ++++++++++.+
T Consensus 136 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 213 (350)
T cd08256 136 FPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLA 213 (350)
T ss_pred cccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHH
Confidence 4555 57899999999998887 8889999998 555668999999977799999999999999984 677788888888
Q ss_pred HHHHHcCCCEEeeCCChHH---HHHhcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcc
Q 030694 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF 148 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~---~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 148 (173)
.+.+ +|++.++++...+. +.+..+ ++|++||++|+...+..++++++++|+++.+|.......++..
T Consensus 214 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 285 (350)
T cd08256 214 LARK-FGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWS 285 (350)
T ss_pred HHHH-cCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChh
Confidence 7777 99988888765433 333332 6999999999755688999999999999999865543344433
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=130.39 Aligned_cols=151 Identities=23% Similarity=0.269 Sum_probs=116.8
Q ss_pred ccccceeEECCCCC-------CcccccchhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEE
Q 030694 2 VADEHFVVRIPEGA-------PLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVI 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~ 72 (173)
+++.+.++++|+.+ +.+ +++++.++.+||+++... ..++++++|+|+|+|++|++++++++..|+ +|+++
T Consensus 156 ~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~ 234 (384)
T cd08265 156 AVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAF 234 (384)
T ss_pred EechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 46778899999863 344 567888899999998655 567899999999889999999999999999 79999
Q ss_pred eCCcchHHHHHHHcCCCEEeeCCCh---HHHH---Hhc--CCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCCCCCCc
Q 030694 73 STSPSKKSEAVERLGADSFLVSRDQ---DEMQ---AAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~---~~~--~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
+++++|.+.+++ +|.+.++++.+. ++.+ +.. +++|+++|++|+. ..+..++++++++|+++.+|......
T Consensus 235 ~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 313 (384)
T cd08265 235 EISEERRNLAKE-MGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTV 313 (384)
T ss_pred cCCHHHHHHHHH-cCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCC
Confidence 988888888888 999888876632 2222 222 2799999999974 35788999999999999998654434
Q ss_pred ccCccccccCc
Q 030694 144 ELPAFPLLTGE 154 (173)
Q Consensus 144 ~~~~~~~~~~~ 154 (173)
.++...+..+.
T Consensus 314 ~~~~~~~~~~~ 324 (384)
T cd08265 314 PLHLEVLQVRR 324 (384)
T ss_pred cccHHHHhhCc
Confidence 44444443333
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.7e-18 Score=129.21 Aligned_cols=137 Identities=23% Similarity=0.293 Sum_probs=118.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||.++.....+.++++++|+|+ |.+|.+++++++.+|++|+++++++++.+
T Consensus 100 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred EcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46677899999999999999999999999999887777789999999986 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHH---Hhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~---~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+ +.. .++|+++||+|+. .....+++++++|+++.+|...
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 180 RAKK-AGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred HHHH-CCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCC
Confidence 9977 9988888776543322 222 2799999999986 6888999999999999998654
|
|
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=126.87 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|.++++++|++++.++++.+ ....++|.++ +...++++++++|+|+|.+|.+++|+++.+|++|++++.++++++.
T Consensus 117 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~ 194 (319)
T cd08242 117 TLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLAL 194 (319)
T ss_pred EechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677889999999998887753 4445667666 4455689999999988999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|++.++++... .-.+++|+++||+|+...+..++++++++|+++..+.......++...+..++..
T Consensus 195 ~~~-~g~~~~~~~~~~----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
T cd08242 195 ARR-LGVETVLPDEAE----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEIT 264 (319)
T ss_pred HHH-cCCcEEeCcccc----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceE
Confidence 998 998887776432 1224799999999986578899999999999998776554455666555556554
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=130.42 Aligned_cols=135 Identities=29% Similarity=0.388 Sum_probs=114.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+++.+.+||+++... .++++++++|+|+ |.+|++++++++..|++++++++++++.+
T Consensus 123 ~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 123 KVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred ecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999877 6689999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-HHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ + +++++++... ..+.+. +++|+++||+|+. ....++++++++|+++.+|..+.
T Consensus 202 ~~~~-~-~~~~~~~~~~~~~v~~~-~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 259 (334)
T PRK13771 202 IVSK-Y-ADYVIVGSKFSEEVKKI-GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDP 259 (334)
T ss_pred HHHH-H-HHHhcCchhHHHHHHhc-CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCC
Confidence 8876 7 6666655411 122222 4799999999997 58899999999999999997543
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=134.58 Aligned_cols=148 Identities=19% Similarity=0.253 Sum_probs=110.1
Q ss_pred eeEECCCCCCcccccch---hhHHHHHHHHHH--------hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEE
Q 030694 7 FVVRIPEGAPLDATAPL---LCAGITVYSPLR--------FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTV 71 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l---~~~~~ta~~~l~--------~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~---~v~~ 71 (173)
.++++|+++++++++.+ ++. .++++++. ....+++|++|+|+|+ |++|++++|+++..|+ +|++
T Consensus 130 ~~~~lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~ 208 (410)
T cd08238 130 DCLLIYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV 208 (410)
T ss_pred CeEECCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence 58999999999988743 233 23444432 3345689999999986 9999999999999864 7999
Q ss_pred EeCCcchHHHHHHHc--------CCC-EEeeCCC-hHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 72 ISTSPSKKSEAVERL--------GAD-SFLVSRD-QDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 72 ~~~~~~~~~~~~~~~--------g~~-~v~~~~~-~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++++++|++.+++ + |++ .++++.+ .+. +.+.. .++|++||++|.+..+..++++++++|+++.+
T Consensus 209 ~~~~~~r~~~a~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~ 287 (410)
T cd08238 209 TDVNDERLARAQR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFF 287 (410)
T ss_pred EcCCHHHHHHHHH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEE
Confidence 9999999999988 6 655 4677653 222 22332 27999999999877889999999999988776
Q ss_pred CCC-CC--CcccCccccccCccc
Q 030694 137 GAP-EK--PLELPAFPLLTGEEE 156 (173)
Q Consensus 137 g~~-~~--~~~~~~~~~~~~~~~ 156 (173)
+.. .+ ..+++...++.++.+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T cd08238 288 AGPVDKNFSAPLNFYNVHYNNTH 310 (410)
T ss_pred EccCCCCccccccHHHhhhcCcE
Confidence 432 22 246777777777776
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=127.07 Aligned_cols=149 Identities=22% Similarity=0.293 Sum_probs=116.6
Q ss_pred ceeEECCCCCCccccc-----chhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 6 HFVVRIPEGAPLDATA-----PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
+.++++|++++.+++. ++...+.|||+++.. ..++++++++|.|+|++|++++++++..|++ ++++++++++.
T Consensus 128 ~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~ 206 (345)
T cd08287 128 GTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQ 206 (345)
T ss_pred CceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 3899999999873211 233678899999864 4568999999988899999999999999995 88888888888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++...+..+++ . .++|+++|++|+...+..++++++++|+++.+|....+..++....+.++
T Consensus 207 ~~~~~-~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 285 (345)
T cd08287 207 ALARE-FGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRN 285 (345)
T ss_pred HHHHH-cCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcc
Confidence 88887 999999988765444333 2 27999999999876789999999999999999865544455554445555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 286 ~~ 287 (345)
T cd08287 286 VG 287 (345)
T ss_pred eE
Confidence 55
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=126.28 Aligned_cols=153 Identities=31% Similarity=0.396 Sum_probs=126.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++.+++.+++.+.+||+++.....++++++++|+|+|++|.+++++++..|++|+++++++++.+.
T Consensus 120 ~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~ 199 (336)
T cd08276 120 VLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLER 199 (336)
T ss_pred EecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 35677899999999999999999999999999988777799999999987999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCC-hHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 82 AVERLGADSFLVSRD-QDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~-~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
+.+ +|.+.+++... .+. +.+.. .++|+++|+++.. ....++++++++|+++.+|..... ...+...++.++
T Consensus 200 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (336)
T cd08276 200 AKA-LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKG 277 (336)
T ss_pred HHH-cCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcc
Confidence 988 89888887654 322 22232 3799999999876 688999999999999999865432 234455555666
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 278 ~~ 279 (336)
T cd08276 278 AT 279 (336)
T ss_pred eE
Confidence 54
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-17 Score=123.38 Aligned_cols=150 Identities=24% Similarity=0.322 Sum_probs=116.5
Q ss_pred ccccceeEECCCCCCcccccchh-hHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLL-CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~-~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
+++++.++++|+++ . .++++ .++.++++++. ...++++++++|+|+|.+|.+++++++..|++ |+++.+++++.
T Consensus 92 ~v~~~~~~~lP~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~ 167 (312)
T cd08269 92 LADADHAVPLPSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL 167 (312)
T ss_pred EEchhheEECCCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence 56788999999988 2 23344 78889999887 56668999999998899999999999999998 99999998888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+.+++ +|.+.++++...+..++ .. .++|+++||+|........+++++++|+++.+|.... ...++...+..+
T Consensus 168 ~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~ 246 (312)
T cd08269 168 ALARE-LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWK 246 (312)
T ss_pred HHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhc
Confidence 87777 99888887654433333 32 3799999999877678899999999999999986542 234444444445
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
...
T Consensus 247 ~~~ 249 (312)
T cd08269 247 GID 249 (312)
T ss_pred CCE
Confidence 443
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-17 Score=125.53 Aligned_cols=151 Identities=19% Similarity=0.208 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++. ...+.++++++.. ...+|++++|.|+|.+|.+++++++..|+ +|+++.+++++.+
T Consensus 126 ~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T PRK05396 126 VIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLE 202 (341)
T ss_pred EechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 467788999999999888764 4555666655543 23689999998889999999999999999 6888888888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++++++++..+..+. +. +++|++|||.|....+..++++++++|+++.+|..+....++...+..+..
T Consensus 203 ~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 281 (341)
T PRK05396 203 LARK-MGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGL 281 (341)
T ss_pred HHHH-hCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcce
Confidence 8887 99999988776543333 22 379999999998767899999999999999999765544555555555555
Q ss_pred c
Q 030694 156 E 156 (173)
Q Consensus 156 ~ 156 (173)
.
T Consensus 282 ~ 282 (341)
T PRK05396 282 T 282 (341)
T ss_pred E
Confidence 4
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=123.55 Aligned_cols=152 Identities=28% Similarity=0.388 Sum_probs=124.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+||+++.....+.++++++|+|+ |++|.+++++++..|++|+++++++++.+
T Consensus 104 ~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 183 (325)
T cd08253 104 VVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE 183 (325)
T ss_pred EecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35667889999999999999999999999999988777789999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+.+ +|.+.+++....+..+. .. +++|++++|+|.. .....+++++++|+++.+|.......++...++.+..
T Consensus 184 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T cd08253 184 LVRQ-AGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEA 261 (325)
T ss_pred HHHH-cCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCc
Confidence 9977 89888887765443332 22 3799999999988 5788899999999999998654333444444344444
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.6e-17 Score=121.37 Aligned_cols=137 Identities=26% Similarity=0.413 Sum_probs=117.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+++.+.++|+++.....+.++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 64 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 64 RTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred EccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778999999999999999999999999999877677789999999996 99999999999999999999999999999
Q ss_pred HHHHHcCC--CEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGA--DSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~--~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|. +.++++.+.+..+++. +++|.++|++|+. .....+++++++|+++.+|...
T Consensus 144 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 144 FLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred HHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcC
Confidence 9977 997 6777776544433322 2799999999975 6889999999999999998653
|
Enoylreductase in Polyketide synthases. |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=7e-17 Score=124.73 Aligned_cols=151 Identities=19% Similarity=0.209 Sum_probs=115.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++++.++++|++++.++ ++++..+.+|++++. ...+++++++|.|+|++|.+++++++.+|++ |+++.+++++.+
T Consensus 124 ~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~~--~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~ 200 (340)
T TIGR00692 124 VVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTVL--AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLE 200 (340)
T ss_pred EeehHHcEECcCCCChHh-hhhcchHHHHHHHHH--ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 456778999999999855 467788889988863 3347899999987799999999999999996 888877787888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcc-ccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++ . +++|+++||+|....+...+++|+++|+++.+|.......++.. .++.+.
T Consensus 201 ~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 279 (340)
T TIGR00692 201 LAKK-MGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKG 279 (340)
T ss_pred HHHH-hCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcc
Confidence 7777 998888877654433332 2 37999999999766788999999999999999975433333333 344444
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 280 ~~ 281 (340)
T TIGR00692 280 LT 281 (340)
T ss_pred eE
Confidence 43
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.1e-17 Score=123.34 Aligned_cols=137 Identities=30% Similarity=0.371 Sum_probs=118.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.++|+++.....+.++++++|+|+ |++|.+++++++.+|++|+++++++++.+
T Consensus 96 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 96 VVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred EecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45677899999999999999999999999999887777789999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+.... .. .++|++++|+++. .....+++++++|+++.+|...
T Consensus 176 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 176 LARA-AGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcEEEEEecCC
Confidence 9977 99888887765443332 22 2799999999986 6889999999999999998654
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.5e-17 Score=124.36 Aligned_cols=136 Identities=23% Similarity=0.229 Sum_probs=112.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++.+++.+ ..+.++++++ ....++++++++|+|+|.+|.+++++++..|++ |+++.+++++.+
T Consensus 121 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 198 (334)
T cd08234 121 VVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLE 198 (334)
T ss_pred EecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999988755 7788999988 555668999999998899999999999999997 888999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHH--Hh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ--AA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~--~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.++++...+... .. .+++|++|||+|........+++++++|+++.+|...
T Consensus 199 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 199 LAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred HHHH-hCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCC
Confidence 8877 8987787776543221 11 2379999999987657889999999999999998654
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=8e-17 Score=124.59 Aligned_cols=135 Identities=31% Similarity=0.392 Sum_probs=114.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC----CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK----PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~----~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.+|.+.++++|++++.++++.+++.+.|||+++.+...+. +|++++|+|+ |++|.+++++++..|++|+++.++
T Consensus 118 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~- 196 (350)
T cd08248 118 VVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST- 196 (350)
T ss_pred EecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-
Confidence 4677889999999999999999999999999997776654 4999999997 999999999999999999888765
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++.+.+++ +|.+.+++..+.+..+.+. +++|++||++|+. ....++++++++|+++.+|..
T Consensus 197 ~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 197 DAIPLVKS-LGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred chHHHHHH-hCCceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence 56666666 8988888876654444433 4799999999988 689999999999999999854
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.1e-17 Score=124.34 Aligned_cols=131 Identities=34% Similarity=0.446 Sum_probs=114.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++.+++.+++.+.|||+++ ....++++++++|+|+|++|++++++++..|++|+++++++++++.
T Consensus 128 ~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~ 206 (329)
T cd08298 128 VADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL 206 (329)
T ss_pred EecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHH
Confidence 467788999999999999999999999999999 6666799999999988999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+++ +|++.+++.... ..+++|+++++.+....+..++++++++|+++.+|..
T Consensus 207 ~~~-~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 207 ARE-LGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIH 258 (329)
T ss_pred HHH-hCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCC
Confidence 977 998877765432 1247999999877666789999999999999998853
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-17 Score=125.86 Aligned_cols=136 Identities=23% Similarity=0.218 Sum_probs=111.0
Q ss_pred ccccc--eeEECCCCCCcc---cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 030694 2 VADEH--FVVRIPEGAPLD---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~ 75 (173)
++|.+ +++++|++++++ +++++++.+.|||+++ ....+.++++|+|.|+|++|++++|+++..|+ +|++++++
T Consensus 132 ~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~ 210 (375)
T cd08282 132 RVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHV 210 (375)
T ss_pred EeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34544 899999999998 5688999999999999 45566899999998889999999999999998 79999899
Q ss_pred cchHHHHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeCCCC
Q 030694 76 PSKKSEAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|.+.+++ +|+. .+++.+.+.... .. +++|+++||+|... .+..++++++++|+++.+|...
T Consensus 211 ~~~~~~~~~-~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~ 288 (375)
T cd08282 211 PERLDLAES-IGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV 288 (375)
T ss_pred HHHHHHHHH-cCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence 999998888 9984 456655433332 22 37999999999873 3789999999999999887643
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.9e-17 Score=120.92 Aligned_cols=134 Identities=27% Similarity=0.404 Sum_probs=111.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+ +.+.|||+++.. ..++++++++|+|+|.+|.+++++++.+|++ |+++++++++.+
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~ 136 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE 136 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH
Confidence 4677899999999999888888 889999999864 5668999999998899999999999999998 999999999999
Q ss_pred HHHHHcC-CCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +| .+.+++..... ....++|++||+++........+++++++|+++.+|..+.
T Consensus 137 ~~~~-~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~ 194 (277)
T cd08255 137 LAEA-LGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGL 194 (277)
T ss_pred HHHH-cCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCC
Confidence 7787 88 55555432211 0123799999999976678899999999999999986544
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.5e-17 Score=123.20 Aligned_cols=135 Identities=27% Similarity=0.321 Sum_probs=114.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+. +.+++.+++++.|||+++.....+.++++++|+|+ |.+|.+++++++..|++|+++.+++++.+
T Consensus 101 ~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 101 VVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred EechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4677889999987 35678899999999999988777799999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+. . .+++|++||++|+. .+...+++++++|+++.+|...
T Consensus 179 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 179 FLKS-LGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred HHHH-cCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEeccc
Confidence 9977 99888887665433222 2 23799999999986 6889999999999999998654
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=122.51 Aligned_cols=135 Identities=29% Similarity=0.387 Sum_probs=115.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.|||+++.. ..+.++++++|+|+ |++|++++++++..|++|+++.+++++.+
T Consensus 123 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 123 KVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred EechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 46778899999999999999999999999999987 66689999999998 99999999999999999999999988888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.+ +|.+.+++..+ ..+.+. .++|++++++|.. ....++++++++|+++.+|....
T Consensus 202 ~~~~-~~~~~~~~~~~--~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~ 260 (332)
T cd08259 202 ILKE-LGADYVIDGSK--FSEDVKKLGGADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTP 260 (332)
T ss_pred HHHH-cCCcEEEecHH--HHHHHHhccCCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCC
Confidence 8876 88877776543 222222 2799999999988 48899999999999999986543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=119.58 Aligned_cols=137 Identities=26% Similarity=0.361 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.++|+++.....++++++++|+|+ |.+|++++++++.+|++++++.+++++.+
T Consensus 68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 147 (293)
T cd05195 68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKRE 147 (293)
T ss_pred EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999877777799999999986 99999999999999999999999999999
Q ss_pred HHHHHcC--CCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLG--ADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g--~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ ++ .+.++++...+..+++ . .++|++++++|+. .++..+++++++|+++.+|...
T Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 148 FLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred HHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccc
Confidence 9888 66 6777777654433332 2 2799999999998 7899999999999999998654
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=123.38 Aligned_cols=152 Identities=22% Similarity=0.296 Sum_probs=114.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++. .....++++++ ....+.++++++|+|+|++|.+++++++..|++ +++++++++|.+
T Consensus 143 ~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 220 (364)
T PLN02702 143 VHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLS 220 (364)
T ss_pred EcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 466778999999999888764 22344577777 445568999999998899999999999999995 777778888888
Q ss_pred HHHHHcCCCEEeeCC--ChHH---HHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 81 EAVERLGADSFLVSR--DQDE---MQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~--~~~~---~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+++ +|++.++++. ..+. +.++ .+++|++||++|....+..++++++++|+++.+|...+...++...+.
T Consensus 221 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 299 (364)
T PLN02702 221 VAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAA 299 (364)
T ss_pred HHHH-hCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHH
Confidence 8877 9988776643 2222 2222 237999999999765789999999999999999965443344444555
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
.++..
T Consensus 300 ~~~~~ 304 (364)
T PLN02702 300 AREVD 304 (364)
T ss_pred hCccE
Confidence 55554
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=120.99 Aligned_cols=153 Identities=30% Similarity=0.342 Sum_probs=124.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|+++++++++.++..+.++|+++.....+.++++++|+|+ |++|++++++++..|++|+++.+++++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 99 VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred EcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45677899999999999999999999999999887777789999999998 89999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.+++....+....+ . +++|++++++|+.. ....+++++++|+++.+|..+. ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd05276 179 ACRA-LGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKR 256 (323)
T ss_pred HHHH-cCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhC
Confidence 8877 898888877654433332 1 37999999999884 7889999999999999986542 2344444444454
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 257 ~~ 258 (323)
T cd05276 257 LT 258 (323)
T ss_pred Ce
Confidence 43
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=122.30 Aligned_cols=136 Identities=21% Similarity=0.289 Sum_probs=109.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.+. ++++..+.++++++.. ...++++|+|.|+|.+|.+++++++..|+ +|++++++++|.+
T Consensus 126 ~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~~~--~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T cd05281 126 VVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTVLA--GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLE 202 (341)
T ss_pred EechHHcEECcCCCCHHH-hhhhhHHHHHHHHHHh--cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 567789999999998854 4677778888887652 33789999998889999999999999999 7988888888888
Q ss_pred HHHHHcCCCEEeeCCChHH--HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDE--MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~--~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.++++++...+. +.+.. +++|++|||+|.......++++|+++|+++.+|....
T Consensus 203 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (341)
T cd05281 203 LAKK-MGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG 266 (341)
T ss_pred HHHH-hCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence 8787 99888887654433 22222 3799999999987678899999999999999986544
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=120.63 Aligned_cols=153 Identities=31% Similarity=0.329 Sum_probs=124.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|++++..+++.++..+.|+|+++.....+.++++++|+|+ |++|.+++++++..|++|+++.+++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 99 AVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred EecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777899999999997 99999999999999999999999999888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.+++....+....+. +++|++++++|.. .....+++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (325)
T TIGR02824 179 ACEA-LGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKR 256 (325)
T ss_pred HHHH-cCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcC
Confidence 8866 8987777766544333322 3699999999987 68899999999999999986442 2245555554555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 257 ~~ 258 (325)
T TIGR02824 257 LT 258 (325)
T ss_pred CE
Confidence 54
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=120.28 Aligned_cols=154 Identities=21% Similarity=0.282 Sum_probs=120.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHH---hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+++.+.++++|++++.++++.+++.+.+|+.++. .....+++++++|+|+ |++|.+++++++.+|++|+++..+++
T Consensus 103 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~ 182 (324)
T cd08288 103 RVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE 182 (324)
T ss_pred EEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4677889999999999999999999999987764 3344236789999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChHH-HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDE-MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~-~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
|.+.+++ +|+++++++.+.+. +.... +++|.++|++++. .+...+..++.+|+++.+|...+ +..++...++.++
T Consensus 183 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~ 260 (324)
T cd08288 183 EADYLRS-LGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRG 260 (324)
T ss_pred HHHHHHh-cCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccc
Confidence 9999977 99999988765332 22222 3689999999985 57788899999999999986532 2234444444555
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
.++
T Consensus 261 ~~~ 263 (324)
T cd08288 261 VTL 263 (324)
T ss_pred cEE
Confidence 553
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=120.36 Aligned_cols=136 Identities=21% Similarity=0.267 Sum_probs=116.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.++..+.+||+++. ...++++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 159 (303)
T cd08251 81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE 159 (303)
T ss_pred EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4677889999999999999999999999999985 566799999999987 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+.... .. .++|+++|++++. .....+++++++|+++.+|..+
T Consensus 160 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 160 YLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred HHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccC
Confidence 9977 99988888765443332 22 3799999999876 6889999999999999987543
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.2e-16 Score=118.69 Aligned_cols=138 Identities=26% Similarity=0.325 Sum_probs=117.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+|++++.....+.++++++|+|+ +.+|++++++++..|++|+++++++++.+
T Consensus 126 ~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 126 AVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred EechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777789999999998 79999999999999999999999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh----c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA----M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~----~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.. ++.+.+++..+.+..+.+ . +++|+++++.|.. .+...+++++++|+++.+|....
T Consensus 206 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 206 RAKE-LGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred HHHH-cCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCC
Confidence 8877 887777776654433332 1 3799999999987 58899999999999999986543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=117.18 Aligned_cols=136 Identities=19% Similarity=0.192 Sum_probs=115.2
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+..++.|||-.+...+..++|++++|-|| |.+|.++-|+++.+||+|+..+.+++|.+.++..+|.+..+||.++..
T Consensus 132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~ 211 (343)
T KOG1196|consen 132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESD 211 (343)
T ss_pred hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccC
Confidence 3788899999999999988899999999998 999999999999999999999999999999999899999999998743
Q ss_pred HHH-hc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC---Cc---ccCccccccCcccc
Q 030694 100 MQA-AM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PL---ELPAFPLLTGEEED 157 (173)
Q Consensus 100 ~~~-~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~---~~~~~~~~~~~~~~ 157 (173)
+.+ +. .++|+.||.+|+. .++..+..|+..||++.||..+. +. --+...++.|++.+
T Consensus 212 ~~~aL~r~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~i 279 (343)
T KOG1196|consen 212 LSAALKRCFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRI 279 (343)
T ss_pred HHHHHHHhCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEe
Confidence 333 32 3999999999999 69999999999999999997553 11 12235666666654
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-16 Score=117.75 Aligned_cols=138 Identities=30% Similarity=0.378 Sum_probs=117.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++..+++.+...+.+|++++.....+.++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 99 VVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred EcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35667889999999998888899999999999886677789999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.+.+++....+..+. .. .++|.+++++|+. ....++++++++|+++.+|....
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~ 242 (323)
T cd08241 179 LARA-LGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASG 242 (323)
T ss_pred HHHH-cCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCC
Confidence 9987 89877777665433322 22 3799999999986 68889999999999999986543
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.5e-16 Score=117.49 Aligned_cols=153 Identities=24% Similarity=0.355 Sum_probs=123.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.++|+++.....+.++++++|+|+ |++|..++++++..|++++++++++++.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 104 LVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred EechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45778899999999999999999999999999987777789999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+.+ +|.+.+++....+.... .. .++|++++++|+. ....++++++++|+++.+|.... ...++....+.++
T Consensus 184 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 261 (328)
T cd08268 184 ALLA-LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKS 261 (328)
T ss_pred HHHH-cCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcC
Confidence 8876 89877877665433222 22 2799999999996 68899999999999999985432 2233333334444
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 262 ~~ 263 (328)
T cd08268 262 LT 263 (328)
T ss_pred CE
Confidence 43
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.8e-16 Score=116.84 Aligned_cols=135 Identities=29% Similarity=0.366 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|++++.++++.+++.+.+||+++.+...++++++++|+|+ |.+|++++++++..|++|+.+.++ ++.+
T Consensus 104 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~ 182 (326)
T cd08272 104 VVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAA 182 (326)
T ss_pred EecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHH
Confidence 45677889999999999999999999999999877777799999999997 999999999999999999999988 8888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++.... ..+.+ . .++|.++|++++. .....+++++++|+++.+|...
T Consensus 183 ~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~ 244 (326)
T cd08272 183 FARS-LGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA 244 (326)
T ss_pred HHHH-cCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC
Confidence 8877 998888776544 33322 2 2799999999987 5888999999999999998553
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=117.14 Aligned_cols=129 Identities=26% Similarity=0.306 Sum_probs=105.9
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhC-CCCCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCCcchHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~-g~~G~~a~~~~~~~-g~-~v~~~~~~~~~~~~~ 82 (173)
.++++|+++++++++.+++++.|||+++.... .+++|++++|+|+ |.+|.+++++++.. |. +++.+. ++++.+.+
T Consensus 115 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~ 193 (352)
T cd08247 115 SITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN 193 (352)
T ss_pred eeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH
Confidence 78999999999999999999999999998876 6789999999998 89999999999987 44 566665 45556677
Q ss_pred HHHcCCCEEeeCCChH---HH----HHhc--CCccEEEEcCCCccchHHHHHhhh---cCCEEEEeC
Q 030694 83 VERLGADSFLVSRDQD---EM----QAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLLG 137 (173)
Q Consensus 83 ~~~~g~~~v~~~~~~~---~~----~~~~--~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g 137 (173)
++ +|.+.++++.+.+ .. +... +++|++|||+|+......++++++ ++|+++.++
T Consensus 194 ~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 194 KK-LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred HH-hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 66 9988888876533 22 2222 489999999998556788999999 999999874
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.3e-15 Score=115.52 Aligned_cols=135 Identities=24% Similarity=0.321 Sum_probs=113.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++++.+||+++.....+.++++++|+|+ |.+|.+++++++..|++|++++. +++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~ 177 (331)
T cd08273 99 NLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHA 177 (331)
T ss_pred EechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHH
Confidence 45677899999999999999999999999999988777799999999998 99999999999999999999987 78888
Q ss_pred HHHHHcCCCEEeeCCChHHHH-Hh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ-AA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~-~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|... ++....+... .. .+++|++++|+|+.. ...++++++++|+++.+|...
T Consensus 178 ~~~~-~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~ 236 (331)
T cd08273 178 ALRE-LGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNS 236 (331)
T ss_pred HHHH-cCCeE-EcCCCcchhhhhccCCCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCC
Confidence 8877 88654 3443332222 12 247999999999985 889999999999999998654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-15 Score=113.66 Aligned_cols=135 Identities=29% Similarity=0.408 Sum_probs=114.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++..+++.+++.+.+|++++.....+.++++++|+|+ |.+|++++++++..|++|+++. ++++.+
T Consensus 101 ~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~ 179 (325)
T cd08271 101 VVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFE 179 (325)
T ss_pred EeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHH
Confidence 45677899999999999999999999999999988877789999999998 8999999999999999988877 667778
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.+ +|.+.+++....+...+ .. .++|.+++++++. .....+++++++|+++.+|..
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 180 YVKS-LGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred HHHH-cCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCC
Confidence 8866 89888887665433322 22 2799999999987 467789999999999998744
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-15 Score=114.20 Aligned_cols=137 Identities=33% Similarity=0.426 Sum_probs=110.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.+||+++.....++++++++|+|+ |++|.+++++++..|++|++++++ ++.+
T Consensus 103 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~ 181 (319)
T cd08267 103 VAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAE 181 (319)
T ss_pred EechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHH
Confidence 45677899999999999999999999999999988887799999999998 999999999999999999998875 7788
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh--cCCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA--MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..... .+++|++++|+|+. ......+..++++|+++.+|...
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 182 LVRS-LGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred HHHH-cCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 8866 998878776544332112 23799999999953 12334444599999999998654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-15 Score=113.03 Aligned_cols=136 Identities=31% Similarity=0.420 Sum_probs=114.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.++++++.....+.++++++|+|+ |.+|++++++++..|++|+++..++ +.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~ 182 (309)
T cd05289 104 VVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NAD 182 (309)
T ss_pred EecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHH
Confidence 35667888999999999999999999999999988876789999999998 9999999999999999999998877 788
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+.. .+++|++++++|+. ....++++++++|+++.+|...
T Consensus 183 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 183 FLRS-LGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred HHHH-cCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCC
Confidence 8866 898778776654432211 23799999999998 6889999999999999998644
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-14 Score=108.37 Aligned_cols=136 Identities=27% Similarity=0.346 Sum_probs=109.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~~ 79 (173)
.++.+.++++|+++++++++.+++.+.+||+++.....++++++|+|+|+ |.+|.+++++++.. +..++.. ..+++.
T Consensus 98 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~ 176 (337)
T cd08275 98 NVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKH 176 (337)
T ss_pred EecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHH
Confidence 35667899999999999999999999999999887777799999999998 99999999999998 3333222 234577
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.++. +|.+.+++....+.... . .+++|+++||+|+. .....+++++++|+++.+|...
T Consensus 177 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 239 (337)
T cd08275 177 EALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRLVVYGAAN 239 (337)
T ss_pred HHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEEEEEeecC
Confidence 77766 89888887765433222 2 24799999999987 5889999999999999998543
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.9e-13 Score=106.57 Aligned_cols=115 Identities=23% Similarity=0.268 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCCh-------------HHH------
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQ-------------DEM------ 100 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~~------ 100 (173)
.++++|+|+|+|++|+++++.++.+|++|++++++++|++.+++ +|++.+ +|..+. +..
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 57999999999999999999999999999999999999999999 998854 554321 111
Q ss_pred -HHhcCCccEEEEcCCCcc-----c-hHHHHHhhhcCCEEEEeCCCC-CC--cccCcccccc-Cccc
Q 030694 101 -QAAMGTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLLGAPE-KP--LELPAFPLLT-GEEE 156 (173)
Q Consensus 101 -~~~~~~~d~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~ 156 (173)
.+..+++|++|+|++.+. . .+++++.+++||+++++|... +. .+.+...++. ++++
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVt 308 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVT 308 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEE
Confidence 111247999999999742 4 489999999999999999753 43 4555556665 6765
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-12 Score=101.82 Aligned_cols=119 Identities=17% Similarity=0.170 Sum_probs=95.8
Q ss_pred HHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCc
Q 030694 29 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 29 ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 107 (173)
+.+.++.+. ....+|++|+|+|+|++|+.+++.++..|++|+++++++.|++.++. +|.+.+ + ..+...+.
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~------~~e~v~~a 258 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-T------MEEAVKEG 258 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-c------HHHHHcCC
Confidence 345665554 33468999999999999999999999999999999999999999988 897533 2 12334578
Q ss_pred cEEEEcCCCccchHHH-HHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 108 DGIIDTVSAVHPLMPL-IGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 108 d~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
|++|+|+|.+..+... +..++++|+++.+|.. ...++...+..++...
T Consensus 259 DVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i 307 (413)
T cd00401 259 DIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEV 307 (413)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEE
Confidence 9999999998777765 9999999999999965 3567887787777653
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.1e-10 Score=87.57 Aligned_cols=111 Identities=16% Similarity=0.201 Sum_probs=86.9
Q ss_pred HHHHHHHHhhCCC-CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCC
Q 030694 28 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 28 ~ta~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (173)
...|.++.+...+ ..|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|.. +.+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecC------HHHHHhC
Confidence 4457777766333 48999999999999999999999999999999999888766666 5654 221 2334458
Q ss_pred ccEEEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 107 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 107 ~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
+|++|+++|....++ ..+..+++|+.++..|....+..++
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~~ 308 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVA 308 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccChH
Confidence 999999999887676 6788999999999999877554443
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.5e-09 Score=81.28 Aligned_cols=118 Identities=19% Similarity=0.297 Sum_probs=87.5
Q ss_pred hhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 23 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
.+.+..+...++.....-..+++++|+|.|.+|+.+++.++.+|++|++++++.++.+.+.. +|.+.+ . .+.+.+
T Consensus 132 ~~~aegav~~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~---~~~l~~ 206 (296)
T PRK08306 132 IPTAEGAIMMAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-H---LSELAE 206 (296)
T ss_pred HhHHHHHHHHHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-c---HHHHHH
Confidence 33333333334444443347899999999999999999999999999999999888888777 886533 2 233444
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCccc
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL 145 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 145 (173)
...++|++|+|++........+..+++++.++.++..++...+
T Consensus 207 ~l~~aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~ 249 (296)
T PRK08306 207 EVGKIDIIFNTIPALVLTKEVLSKMPPEALIIDLASKPGGTDF 249 (296)
T ss_pred HhCCCCEEEECCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe
Confidence 5568999999998764445777889999999999977765443
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-09 Score=86.34 Aligned_cols=100 Identities=25% Similarity=0.314 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCC-------------hHH-------
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD-------------QDE------- 99 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~------- 99 (173)
.++++++|+|+|.+|+.+++.++.+|++|+++++++++++.+++ +|.+.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999998 997653 22211 111
Q ss_pred HHHhcCCccEEEEcC---CCcc---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 100 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 100 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..+...++|++|+|+ |.+. ..+..++.|++|+.+++++...|
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 222234899999999 6543 46688999999999999986554
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.5e-09 Score=82.16 Aligned_cols=104 Identities=21% Similarity=0.171 Sum_probs=81.4
Q ss_pred HHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCcc
Q 030694 30 VYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 30 a~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (173)
.+.++.+.. ....|++|+|+|.|.+|+.+++.++..|++|+++++++.+...+.. .|.. +.+ +++...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~------leeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMT------MEEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCC------HHHHHhcCC
Confidence 355555543 3368999999999999999999999999999999998887766666 6753 321 122345789
Q ss_pred EEEEcCCCccchHH-HHHhhhcCCEEEEeCCCCC
Q 030694 109 GIIDTVSAVHPLMP-LIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 109 ~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~~ 141 (173)
++|+++|.+..++. .+..+++++.++.+|..+.
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 99999999877764 8889999999999987643
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=81.44 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=81.8
Q ss_pred HHHHHhhCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++.+... ...|++++|+|.|.+|+.+++.++..|++|+++++++.+...+.. .|...+ + +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCeec-c------HHHHHhhCCE
Confidence 555555533 367999999999999999999999999999999999887666666 665422 1 2334457899
Q ss_pred EEEcCCCccch-HHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++++.|....+ ...+..|++++.++.+|....
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCCC
Confidence 99999988654 789999999999999997543
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-08 Score=79.03 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=77.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC-----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA----- 116 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~----- 116 (173)
++.+++|+|+|.+|+.+++.++.+|++|+++++++++++.+...++........+.+.+.+...++|++|+|++.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 346699999999999999999999999999999998888887656653223334445555566789999999842
Q ss_pred cc-chHHHHHhhhcCCEEEEeCCCCC
Q 030694 117 VH-PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 117 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+. .....+..+++++.++.++...+
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 21 13678888999999999986554
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-07 Score=72.21 Aligned_cols=100 Identities=20% Similarity=0.310 Sum_probs=77.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.+++++|+|.|.+|..+++.++..|++|++.++++++.+.+.+ .|...+ . .+.+.+...+.|+++++++.....
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence 46899999999999999999999999999999999887777665 664322 2 233444556899999999866323
Q ss_pred HHHHHhhhcCCEEEEeCCCCCCccc
Q 030694 121 MPLIGLLKSQGKLVLLGAPEKPLEL 145 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~ 145 (173)
...+..++++..++.++..++...+
T Consensus 224 ~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 4677889999999999877665444
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.5e-08 Score=76.24 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=80.1
Q ss_pred HHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++.+. ...-.|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|...+ .+.+.....|++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~-------~leell~~ADIV 313 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVV-------TLEDVVETADIF 313 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceec-------cHHHHHhcCCEE
Confidence 444333 34468999999999999999999999999999999988777655555 565422 133455689999
Q ss_pred EEcCCCccchH-HHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 141 (173)
+.++|....+. ..+..|++++.++.+|....
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d~ 345 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFDN 345 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCch
Confidence 99999887665 88999999999999997653
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.1e-08 Score=73.36 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=73.8
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCC---CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (173)
..+++|+.+..+.++... +...++.++...... .++.+|+|+|+|.+|..+++.++..|+ +|++++++.++...+
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 345567777766655322 233334454433321 478999999999999999999988776 899999998887666
Q ss_pred HHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 83 VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 83 ~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.+|.. +++. +...+....+|++|.|++.+..
T Consensus 219 a~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 5558874 3332 2233344579999999999854
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-07 Score=67.21 Aligned_cols=112 Identities=16% Similarity=0.286 Sum_probs=83.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHH----HHh---cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEM----QAA---MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~----~~~---~~~~d~ 109 (173)
+++.++|.|+ +++|.+.++.....|++|+.+.|+.+|++.+..+++. ...+|-.+.+.+ ..+ .+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578999999 8999999999999999999999999999999998983 234555555432 222 247999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCCCcccCccccccC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
.+++.|... .....+..| +..|.++.+|+..+..+.+....+-.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~A 155 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGA 155 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchh
Confidence 999999741 123444444 34689999998887766666555443
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.9e-07 Score=61.53 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=75.0
Q ss_pred HHHHH-hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLR-FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~-~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++. .....-.|++++|+|.|.+|...++.++.+|++|++++.++-+.-++.. -|.. +. .+.+.....|+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-v~------~~~~a~~~adi 81 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-VM------TLEEALRDADI 81 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-EE-------HHHHTTT-SE
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-ec------CHHHHHhhCCE
Confidence 44443 3345578999999999999999999999999999999999977666655 4543 32 24455678999
Q ss_pred EEEcCCCccch-HHHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
+|.++|..+.+ .+.+..|+.+..+..+|..+.++.++
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~ 119 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVD 119 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHH
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeec
Confidence 99999998654 47888999999999999877665544
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.6e-07 Score=63.35 Aligned_cols=97 Identities=20% Similarity=0.360 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
-++++++|+|+|++|..++..+...|+ +|+++.|+.+|.+.+.+.++.. ..+...+ ..+....+|++|+|++.+
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 568999999999999999999999999 5999999999998888877432 2333332 223345899999999987
Q ss_pred cc-h-HHHHHhhhc-CCEEEEeCCCC
Q 030694 118 HP-L-MPLIGLLKS-QGKLVLLGAPE 140 (173)
Q Consensus 118 ~~-~-~~~~~~l~~-~G~~v~~g~~~ 140 (173)
.. + ...+....+ -+.++.++.+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CcccCHHHHHHHHhhhhceeccccCC
Confidence 32 1 222222222 15788887543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.3e-07 Score=67.36 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=81.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc----
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---- 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---- 118 (173)
..+|.|+|+|.+|.-+++++..+|++|++.+.+.+|+..+...++...-.-++....+.+...+.|++|.++-.+.
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 4568899999999999999999999999999999999999997776534445666777777779999998876541
Q ss_pred --chHHHHHhhhcCCEEEEeCCCCC
Q 030694 119 --PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 119 --~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..++.+..|+||+.++.+..-.+
T Consensus 248 kLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEEcCC
Confidence 35688999999999999976554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-06 Score=65.04 Aligned_cols=111 Identities=13% Similarity=0.225 Sum_probs=79.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----E--eeCCChHHHHHhc-------C
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----F--LVSRDQDEMQAAM-------G 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~~-------~ 105 (173)
..+.+++|.|+ +++|...++.+...|++++.+.|+++|++.+.+++...+ + +|.++++....+. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999999 999999999999999999999999999999888765222 2 3444444333322 2
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCCCcccCccccc
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+|+.+++.|-.. .....+..|. ..|.++.+++..+..+.+....+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY 156 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVY 156 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHH
Confidence 7999999999741 1112333342 34889999987765555544443
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.8e-07 Score=77.23 Aligned_cols=78 Identities=24% Similarity=0.370 Sum_probs=59.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC---------------------cchHHHHHHHcCCCEEeeCCC-h
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS---------------------PSKKSEAVERLGADSFLVSRD-Q 97 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~v~~~~~-~ 97 (173)
.+.|++|+|+|+|+.|+++++.++..|++|+++++. +.+++.+++ +|.+..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECC
Confidence 478999999999999999999999999999999853 235566776 88776665432 1
Q ss_pred H-HHHHhcCCccEEEEcCCCcc
Q 030694 98 D-EMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 98 ~-~~~~~~~~~d~vid~~g~~~ 118 (173)
+ ...+...++|++|+++|...
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCC
Confidence 1 12233457999999999763
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.4e-06 Score=65.57 Aligned_cols=100 Identities=22% Similarity=0.278 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCEE-eeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~vid 112 (173)
.++++++||.+|+|. |..+..+++..|. +|++++.+++.++.+++. .+...+ +...+...+....+.+|+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 458899999999976 8877777877765 699999999998888773 232211 111111111101237999985
Q ss_pred cCC------CccchHHHHHhhhcCCEEEEeCCC
Q 030694 113 TVS------AVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 113 ~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
... ....+..+++.|+|||+++..+..
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 532 223578999999999999987643
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.8e-06 Score=60.18 Aligned_cols=99 Identities=27% Similarity=0.276 Sum_probs=70.7
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCCCEE-eeCCChHHHHHhcCCccEEE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF-LVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~d~vi 111 (173)
....++++++||-+|+| +|..++-+++..+ +|+.+++.++=.+.+++ .+|...| +...+...=..-...||.++
T Consensus 66 ~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~ 143 (209)
T COG2518 66 QLLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRII 143 (209)
T ss_pred HHhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEE
Confidence 44445999999999998 6999999999888 99999998874444433 2675333 22222111001123899999
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
-+.+.+..-..+++.|++||+++..
T Consensus 144 Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 144 VTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred EeeccCCCCHHHHHhcccCCEEEEE
Confidence 8888887667889999999998865
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.9e-06 Score=70.30 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=70.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
+|++++|+|+ |++|+.+++.+...|++|+++++++++.+.+.+.++. . ...|-.+.+.+.+. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999999999999999998887776665543 1 12344444333222 34899
Q ss_pred EEEEcCCCcc-------------------------chHHHHHhhhc---CCEEEEeCCCC
Q 030694 109 GIIDTVSAVH-------------------------PLMPLIGLLKS---QGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~-------------------------~~~~~~~~l~~---~G~~v~~g~~~ 140 (173)
++|++.|... .++.+++.+++ +|+++.+++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 9999999421 13344566655 68999998654
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.7e-06 Score=65.38 Aligned_cols=74 Identities=30% Similarity=0.468 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|.+|..+++.++..|+ +|+++.++.++...+.+.+|.. +++. +...+...++|++|+|+|.+.
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---DELPEALAEADIVISSTGAPH 254 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence 578999999999999999999999998 8999999988877555547754 3332 223334458999999999874
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.8e-06 Score=53.50 Aligned_cols=93 Identities=27% Similarity=0.344 Sum_probs=65.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHc---C--CC-EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERL---G--AD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~---g--~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
|+.+||-+|+| .|..+..+++ ..+++|++++.+++-.+.+++.. + .. .++..+- .......+++|+++...
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEECC
Confidence 57899999987 4777777777 57889999999999988888866 2 12 2333322 22223345899999877
Q ss_pred -CCc---c------chHHHHHhhhcCCEEEEe
Q 030694 115 -SAV---H------PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 115 -g~~---~------~~~~~~~~l~~~G~~v~~ 136 (173)
... . .++.+.+.|+|||+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1 267888999999998763
|
... |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.6e-06 Score=63.53 Aligned_cols=98 Identities=24% Similarity=0.274 Sum_probs=75.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC---CCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+|+|+|+|.+|+.+++.+...+ .+|++.+|+.++.+.+....+ ....+|-.+.+...++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 57999999999999999988888 699999999999888877332 23456777777777778888999999998854
Q ss_pred hHHHHHhhhcCCEEEEeCCCCC
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..-+-.|++.|-.++.......
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~ 103 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEE 103 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCc
Confidence 4333356666667777765443
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-05 Score=63.29 Aligned_cols=115 Identities=26% Similarity=0.220 Sum_probs=80.1
Q ss_pred ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 20 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
...+..+..+.+..+.....++++++||.+|+| .|..+..+++..|++|++++.+++..+.+++...... ++....+
T Consensus 145 ~~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~D- 221 (383)
T PRK11705 145 ADTLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQD- 221 (383)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEECc-
Confidence 345667777777776666666899999999986 5777788888889999999999999999888442111 1111111
Q ss_pred HHHhcCCccEEEEc-----CCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 100 MQAAMGTMDGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 100 ~~~~~~~~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..++.+.+|.|+.. +|.. ..+..+.+.|+|||+++...
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12234579998643 3432 34678888999999988754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.2e-05 Score=58.90 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++++.+.. .+... ..|-.+.+.+.+. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999998 999999999999999999999999888776655 44332 3455554433332 248999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9985
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.8e-05 Score=64.92 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--------CC------C-EEeeCCChHHHHHh
Q 030694 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------GA------D-SFLVSRDQDEMQAA 103 (173)
Q Consensus 40 ~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--------g~------~-~v~~~~~~~~~~~~ 103 (173)
.+.|++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ |. . ...|-.+.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 367899999998 99999999999999999999999988876554322 11 1 12344455556666
Q ss_pred cCCccEEEEcCCCcc---------------chHHHHHhhhc--CCEEEEeCCCC
Q 030694 104 MGTMDGIIDTVSAVH---------------PLMPLIGLLKS--QGKLVLLGAPE 140 (173)
Q Consensus 104 ~~~~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 140 (173)
.+++|++|.+.|... ....+++.+.. .+++|.++...
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 679999999998641 01233444433 36899888654
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-05 Score=64.04 Aligned_cols=74 Identities=19% Similarity=0.371 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|.+|..+++.++..|+ +|+++.++.++...+.+.+|.. .+.. +...+...++|++|+|++.+.
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~---~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF---EDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH---HHHHHHHhhCCEEEECCCCCC
Confidence 678999999999999999999999994 8999999988876555547764 2322 223344458999999999774
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.3e-05 Score=57.93 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHh-------cCCccEEEEcC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~vid~~ 114 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.+ .+...+ .|..+.+.+.+. .+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 57899998 999999999999999999999999887777665 454332 465554443332 24799999999
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 84
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.8e-05 Score=58.85 Aligned_cols=125 Identities=24% Similarity=0.288 Sum_probs=79.0
Q ss_pred ccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHH
Q 030694 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 4 ~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (173)
+...++.+++++++..+. .+.+.. ....+... ..++++|+.+|+|. |..++.+++ .|+ +|++++.++...+.+
T Consensus 85 ~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A 158 (250)
T PRK00517 85 PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAA 158 (250)
T ss_pred CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHH
Confidence 345677778877777544 222211 12223222 36789999999986 777765544 676 699999999988888
Q ss_pred HHHcCCCEE---eeCCChHHHHHhcCCccEEEEcCCCc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 83 VERLGADSF---LVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 83 ~~~~g~~~v---~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++++....+ +.-... ...+|+++.+.... ..+..+.+.|+|||+++..|...
T Consensus 159 ~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 159 RENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred HHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 774321111 110000 01599998766543 23557888999999999988654
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.6e-05 Score=58.66 Aligned_cols=111 Identities=17% Similarity=0.308 Sum_probs=78.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cC-CC-EE---eeCCChHHH-------HHhc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LG-AD-SF---LVSRDQDEM-------QAAM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g-~~-~v---~~~~~~~~~-------~~~~ 104 (173)
-.++.|+|.|| +++|..++.-....|++++.+++..++++.+.++ .+ .+ .. .|-++.+.. ....
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 35799999999 8999999998889999999998888877777332 23 23 11 222333222 2334
Q ss_pred CCccEEEEcCCCc-------------------------cchHHHHHhhhcC--CEEEEeCCCCCCcccCccccc
Q 030694 105 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKSQ--GKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 105 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+++|+.+++.|-. .....++..|++. |+++.+++..|...+|...++
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y 163 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY 163 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence 6999999999974 1234667777544 999999998887777776543
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.8e-05 Score=57.97 Aligned_cols=99 Identities=21% Similarity=0.362 Sum_probs=68.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CCEEe--eCCChHHHHH-------hcCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADSFL--VSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~v~--~~~~~~~~~~-------~~~~~d 108 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+. ....+ |-.+.+...+ ..+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999998 999999999999999999999999887766633232 22222 3333332222 234789
Q ss_pred EEEEcCCCcc-----------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 109 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.++.+.|... .++..+++++++|+++.+++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999998531 1345556677789999888654
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.7e-05 Score=55.90 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=69.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHH---cC-CC--EEeeCCChHHHHHhcCCccE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LG-AD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~---~g-~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
..+.++++++.+|+|. |..++.+++..+ .+|++++.+++..+.++++ +| .+ .++..+..+.+....+.+|.
T Consensus 36 l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~ 114 (198)
T PRK00377 36 LRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDR 114 (198)
T ss_pred cCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCE
Confidence 3458999999999986 888888887654 4899999999988877653 44 22 23332223334444468999
Q ss_pred EEEcCCCc---cchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAV---HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (173)
+|...+.. ..+..+.+.|+|+|+++..
T Consensus 115 V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 115 IFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 99866532 3466778899999998864
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.8e-06 Score=58.05 Aligned_cols=90 Identities=21% Similarity=0.319 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|..+++.++..|++|++.++.........+ .+.. .. .++++....|+++.+++...
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~----~~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVE----YV---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEE----ES---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccce----ee---ehhhhcchhhhhhhhhcccccc
Confidence 46999999999999999999999999999999998876553444 4431 11 23344456899998888431
Q ss_pred ---chHHHHHhhhcCCEEEEeCC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~ 138 (173)
.-...+..|+++..+|.++.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSS
T ss_pred ceeeeeeeeeccccceEEEeccc
Confidence 22377888999998888874
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.1e-05 Score=54.48 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=72.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+++|+.++=+|+| +|...+++++... .+|+++++++++.+..+++ ||.+ .++..+.++.+.++. .+|.+|-
T Consensus 31 ~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFI 108 (187)
T COG2242 31 RPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFI 108 (187)
T ss_pred CCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEE
Confidence 34899999999986 4677788885443 4999999999988877663 6644 455555666655433 7999996
Q ss_pred cCCCc--cchHHHHHhhhcCCEEEEeCCC
Q 030694 113 TVSAV--HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 113 ~~g~~--~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
--|.. ..++.++..|+++|++|.-...
T Consensus 109 GGg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 109 GGGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 55532 3577899999999999877543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.8e-05 Score=56.87 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHcCCCEE-eeCCChHHHHHh---cCCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~---~~~~d~vid~~g 115 (173)
++++++|.|+ |++|..+++.+...|++|+.+.+ ++++.+.+....+...+ .|..+.+.+.+. .+++|++|++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4789999998 99999999999999999888765 44555555444564432 344444333322 246999999988
Q ss_pred Ccc---c----------------------hHHHHHhhhcCCEEEEeCCCCC
Q 030694 116 AVH---P----------------------LMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 116 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
... . ...++..++.+|+++.+++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 531 0 1233455667889998876543
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.7e-05 Score=53.76 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=72.2
Q ss_pred ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChH
Q 030694 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (173)
Q Consensus 20 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 98 (173)
..-.|+...++...+.....--.+++++|+|+|. +|..++..++..|++|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4556777777777777665547899999999986 599899999999999988887632
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+....+|++|.+++.+..+... .++++-.++.++.+.
T Consensus 80 ~l~~~l~~aDiVIsat~~~~ii~~~--~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTKQADIVIVAVGKPGLVKGD--MVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHhhCCEEEEcCCCCceecHH--HccCCeEEEEccCCC
Confidence 1222344689999999987644433 467777788888654
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.9e-05 Score=53.30 Aligned_cols=105 Identities=22% Similarity=0.271 Sum_probs=71.0
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEE
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~v 110 (173)
++.....-.++.+++|+|+|.+|...++.++..| .+|++++++.++.+.+.+.++... .....+ ..+..+++|++
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvv 85 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLI 85 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEE
Confidence 4444433256789999999999999999888886 689999999888777666566421 011111 12235689999
Q ss_pred EEcCCCccc----hHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVHP----LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.|++.... .......++++..++.++..+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 999998642 112234567888888887543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.4e-05 Score=58.04 Aligned_cols=99 Identities=14% Similarity=0.222 Sum_probs=68.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHH----HHh----cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEM----QAA----MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~----~~~----~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++++.+.+ .+...+ .|..+.+.+ +++ .+.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999998 999999999999999999999999888877766 454332 355554322 222 14799999
Q ss_pred EcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 112 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 112 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++.|... ....++..+++ .|+++.+++..+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 9987421 02345555543 478998876543
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.8e-05 Score=53.02 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=57.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CCE-EeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADS-FLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++.+++|+|+ |++|..+++.+...|++|+++.++.++.+.+.+.+. ... ..+..+.+...+...+.|++|.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 46789999997 999999988888889999999999888777655442 221 223344444445556899999999
Q ss_pred CCcc
Q 030694 115 SAVH 118 (173)
Q Consensus 115 g~~~ 118 (173)
+...
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 8774
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-05 Score=56.18 Aligned_cols=110 Identities=17% Similarity=0.206 Sum_probs=79.0
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHh--------cCCccE
Q 030694 41 KPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAA--------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~--g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~--------~~~~d~ 109 (173)
...+.|||.|+ |++|.+++.-....|+.|+++.|+-+++..+..++|. .+=+|-.+++.+.+. .++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 45678999986 9999999999999999999999999999998866883 333455554433222 248999
Q ss_pred EEEcCCCcc----------------------c--hHHHH--HhhhcCCEEEEeCCCCCCcccCcccc
Q 030694 110 IIDTVSAVH----------------------P--LMPLI--GLLKSQGKLVLLGAPEKPLELPAFPL 150 (173)
Q Consensus 110 vid~~g~~~----------------------~--~~~~~--~~l~~~G~~v~~g~~~~~~~~~~~~~ 150 (173)
.++..|.+= + +.+++ .+.+..|+++.+|+..+-.++++..+
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~i 151 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSI 151 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhh
Confidence 999988750 0 11222 34578899999998776555554443
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.4e-06 Score=60.88 Aligned_cols=113 Identities=23% Similarity=0.245 Sum_probs=80.3
Q ss_pred hhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCC
Q 030694 23 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRD 96 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~ 96 (173)
|..+-..++..+.....+++|+++|=+|+| .|.+++.+++..|++|+++.-++++.+.+++. .|-. .+.-
T Consensus 53 L~eAQ~~k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l--- 128 (283)
T COG2230 53 LEEAQRAKLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL--- 128 (283)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe---
Confidence 333445566667777778999999999998 68888999999999999999999988888773 3422 1111
Q ss_pred hHHHHHhcCCccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 97 QDEMQAAMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 97 ~~~~~~~~~~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...++..+.+|-|+ +.+|.. .-+..+.++|+|+|+++......
T Consensus 129 -~d~rd~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 129 -QDYRDFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred -ccccccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 11122334588874 556653 23668889999999998776544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.2e-05 Score=58.22 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--CEE---eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSF---LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ |++|+.+++.+...|++|+++++++++++.+.++++. ... .|-.+.+.+.+. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999999999999888777665652 111 344444333222 25799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999996
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4e-05 Score=57.86 Aligned_cols=96 Identities=17% Similarity=0.284 Sum_probs=75.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|.|. +|.-++.++...|++|++..+... .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 46888777788888877657899999999964 999999999999999998876431 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.....|++|.++|.+..+.. ..++++..++.+|...
T Consensus 196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 2334578999999999865555 3589999999999754
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.8e-05 Score=55.71 Aligned_cols=91 Identities=26% Similarity=0.321 Sum_probs=67.9
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc----cc
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV----HP 119 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~----~~ 119 (173)
|+|+|+ |.+|..+++.+...|.+|+++.|++++.+. . .+.+. ..|..+.+.+.+...++|.+|.++|.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-cccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999998877 2 34332 234555666667777999999999853 23
Q ss_pred hHHHHHhhhcCC--EEEEeCCC
Q 030694 120 LMPLIGLLKSQG--KLVLLGAP 139 (173)
Q Consensus 120 ~~~~~~~l~~~G--~~v~~g~~ 139 (173)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 445666665554 77776643
|
... |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.8e-05 Score=56.72 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=68.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+.+. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999998 999999999999999999999999887776666555321 2344444333222 2479999
Q ss_pred EEcCCCcc------------------------chHHHHHhh-hcCCEEEEeCCCC
Q 030694 111 IDTVSAVH------------------------PLMPLIGLL-KSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~~ 140 (173)
|.+.|... ..+.++..+ +++|+++.+++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 99988520 112333444 5678999887644
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.3e-05 Score=58.66 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=56.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++++.+.++ .|.+. ..|-.+.+.+.+. .++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 35789999998 9999999999999999999999998887665443 34332 2344554433332 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 9999999985
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.9e-05 Score=55.44 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=68.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC---EEeeCCChHHHHHh------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAA------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~------~~~~ 107 (173)
++++++|.|+ +++|+..++.+...|++|+++++++++.+.+.+.+ +.. ...|-.+.+.+++. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999998 89999999999999999999999988776665433 322 12344444333222 2479
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
|+++++.|... ....+++.|+. .|+++.+++...
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 99999998531 12345566643 389999876543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=57.25 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CCEEeeCCChHHHHH----h---cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
.|.+|||.|+ .++|+..++.....|=+|++..|+++++++++..+. ...+.|-.+.+..++ + ....++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999987 799999999999999999999999999999999655 233445444432222 2 23789999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
++.|..
T Consensus 84 NNAGIq 89 (245)
T COG3967 84 NNAGIQ 89 (245)
T ss_pred eccccc
Confidence 998874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.1e-05 Score=57.43 Aligned_cols=100 Identities=16% Similarity=0.304 Sum_probs=69.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++++.+.++ .|.+. ..|..+.+.+++. .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999998 9999999999999999999999998877665443 34332 2344444433322 3589
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
|++|++.|... ....++..+++ .|+++.+++..+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 99999998531 11234555654 589999886543
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.2e-05 Score=58.09 Aligned_cols=100 Identities=29% Similarity=0.273 Sum_probs=64.8
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCE-EeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADS-FLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~~~d~ 109 (173)
....+++|++||-+|+| .|..++-+++..|. +|+.+++.++-.+.+++. ++.+. .+...+...-......||.
T Consensus 66 ~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~ 144 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDR 144 (209)
T ss_dssp HHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEE
T ss_pred HHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCE
Confidence 44446999999999987 57778888887775 699999988766666554 34322 1222222111112348999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++-+.+-+..-...++.|++||+++..
T Consensus 145 I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 145 IIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred EEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 998888876566888999999999874
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.9e-05 Score=57.02 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+++++|+|+|++|.+++..++..| .+|+++.|+.++.+.+.+.++...-+.. ..+ ..+...++|++|+|++....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE-LQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc-chhccccCCEEEECCcCCCC
Confidence 56789999999999999999999999 5999999999988877765552210111 001 11233579999999986521
Q ss_pred -----hHHHHHhhhcCCEEEEeCC
Q 030694 120 -----LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 -----~~~~~~~l~~~G~~v~~g~ 138 (173)
.......++++..++.+-.
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEeec
Confidence 1123456777777777743
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.9e-05 Score=60.98 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=71.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ +++|+..++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+++. .+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999998 999999999999999999999999888887777565332 2344444333222 2579999
Q ss_pred EEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|.+.|... ....++..++.+|+++.+++..+
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 99988520 12344556666799999886543
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.2e-05 Score=56.23 Aligned_cols=76 Identities=28% Similarity=0.329 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++.+...+.+ +.. . ..|-.+.+.+.+ . .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887665543323 222 1 234444333322 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998864
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00012 Score=53.95 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHH-------HhcCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQ-------AAMGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~-------~~~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|..+.+... +..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999998 9999999999999999999999988777776665664321 2333332221 223579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999885
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.4e-05 Score=57.85 Aligned_cols=76 Identities=26% Similarity=0.268 Sum_probs=55.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
++++++|+|+|+.+.+++..+...|+ +|+++.|+.+|.+.+.+.++... +......+...+....+|++|+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 89999999998888876565321 111111122223345799999999875
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00013 Score=54.58 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCE-EeeCCChHHHH-------HhcCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~-------~~~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|-.+.+.+. +..+++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999998 999999999988899999999999888776655455 221 23444443322 2235899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99885
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.2e-05 Score=56.31 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=67.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC-C-----------------C--hHHHH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS-R-----------------D--QDEMQ 101 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~-~-----------------~--~~~~~ 101 (173)
+..+|+|+|+|.+|..|+++++.+|++++..+...++++.... .+...+... . . ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 3478999999999999999999999999999999988888877 665433221 0 0 12233
Q ss_pred HhcCCccEEEEcCCCc------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 102 AAMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 102 ~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+....+|++|.+.-.. -.....++.|+++..++.++.-.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 3334789998543221 13458889999999999997543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=8.4e-05 Score=59.20 Aligned_cols=96 Identities=14% Similarity=0.226 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+.+++|+|+|++|.+++..+...|+ +++++.|+.+|.+.+.+.++...++. .+...+....+|++|+|++.+..
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---LSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCCCCe
Confidence 568899999999999999999999997 79999999888887777676222322 23334445689999999999843
Q ss_pred hHHHHHhhhcC-CEEEEeCCCC
Q 030694 120 LMPLIGLLKSQ-GKLVLLGAPE 140 (173)
Q Consensus 120 ~~~~~~~l~~~-G~~v~~g~~~ 140 (173)
+=. ...++.. =.++.++.+.
T Consensus 256 vi~-~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCCC
Confidence 211 1112211 1456777554
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.1e-05 Score=54.83 Aligned_cols=93 Identities=17% Similarity=0.127 Sum_probs=63.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.|++|+|+|+|.+|..-++.+...|++|++++.... .+..+.+ .|.-..+.. +.. .....+++++|-+++.+..-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~~-~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLAR-CFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEeC-CCC--HHHhCCcEEEEECCCCHHHH
Confidence 578999999999999999999999999999987654 3344433 342222222 111 12345899999999998544
Q ss_pred HHHHHhhhcCCEEEEeCC
Q 030694 121 MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~ 138 (173)
.......+..|..+.+..
T Consensus 84 ~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVD 101 (205)
T ss_pred HHHHHHHHHcCCEEEECC
Confidence 455566667777776543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.5e-05 Score=56.24 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCc---chHHHHHHHcCC---C---EEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAVERLGA---D---SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++++++|+|+|++|++++..+...|++ |+++.|++ ++.+.+.+++.. . ...+..+.+...+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4578999999999999999988899995 99999986 555555443421 1 122333333333344578999
Q ss_pred EEcCCCccc-----hHH-HHHhhhcCCEEEEeC
Q 030694 111 IDTVSAVHP-----LMP-LIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~~~-----~~~-~~~~l~~~G~~v~~g 137 (173)
|+|++-... ... ....+.++..++.+-
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 236 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTV 236 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence 999974310 000 124566666666664
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00015 Score=55.65 Aligned_cols=75 Identities=23% Similarity=0.273 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHH----h---cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+..-. ..|-.+.+.+++ + .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5789999998 999999999999999999999999887766654343111 234444433322 2 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99984
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.2e-05 Score=53.77 Aligned_cols=99 Identities=29% Similarity=0.274 Sum_probs=67.1
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCcc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d 108 (173)
....++++++||-+|+| .|..+..+++..+ .+|+.++.+++-.+.+++.+ |.. .++..+..... ...+.+|
T Consensus 70 ~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD 147 (212)
T PRK13942 70 ELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYD 147 (212)
T ss_pred HHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcC
Confidence 33445899999999987 4667777777665 59999999998877776643 322 22222211110 0124799
Q ss_pred EEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 109 GIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 109 ~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
.++-...........++.|++||+++..
T Consensus 148 ~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 148 RIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 9987666565667888999999998765
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00012 Score=55.06 Aligned_cols=103 Identities=20% Similarity=0.123 Sum_probs=68.1
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCccE
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~d~ 109 (173)
++.+.....++++++|+|+|++|.+++..+...|++|+++.+++++.+.+.+.++. ..... .+. .....+|+
T Consensus 107 ~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~Di 181 (270)
T TIGR00507 107 DLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDL 181 (270)
T ss_pred HHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccE
Confidence 34332333557899999999999999998888999999999998887776664432 11211 111 12247999
Q ss_pred EEEcCCCcc--ch---HHHHHhhhcCCEEEEeCCCC
Q 030694 110 IIDTVSAVH--PL---MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 110 vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+|++... .. ......++++..++.+...+
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999999741 11 11234577777888776433
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.8e-05 Score=54.85 Aligned_cols=106 Identities=13% Similarity=0.014 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+++|+|+|+|.+|...++.+...|++|+++.+... ++..+.. -+.- ..... .+......++|++|-+++.+.
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i-~~~~~--~~~~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKI-RWKQK--EFEPSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCE-EEEec--CCChhhcCCceEEEEcCCCHH-
Confidence 3688999999999999999988889999999976532 2222222 1211 11211 111222458999999999995
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
++..+...+..+.++.+...+....+-.....
T Consensus 83 lN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~ 114 (202)
T PRK06718 83 VNEQVKEDLPENALFNVITDAESGNVVFPSAL 114 (202)
T ss_pred HHHHHHHHHHhCCcEEECCCCccCeEEEeeEE
Confidence 56555555555666655433333333333333
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00022 Score=46.66 Aligned_cols=98 Identities=17% Similarity=0.252 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+.++++++-+|+|. |..+..+++..+ .+|++++.++...+.+++. ++.. .++..+.........+.+|+++.
T Consensus 16 ~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~ 94 (124)
T TIGR02469 16 RLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFI 94 (124)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEE
Confidence 346788999999975 888888888764 5999999999888777653 3322 23322211112223358999997
Q ss_pred cCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..+.. ..++.+.+.|+++|+++...
T Consensus 95 ~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 95 GGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 65433 24678889999999988654
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00015 Score=53.31 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
.++++++|+|+ |++|..++..+...|++|+++++++++...+.+.+ +.. . ..|-.+.+.+.+. .++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887666554322 322 1 2244444333222 257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999986
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.5e-05 Score=60.10 Aligned_cols=108 Identities=31% Similarity=0.285 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C-EEeeCCChHHH
Q 030694 26 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D-SFLVSRDQDEM 100 (173)
Q Consensus 26 ~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~-~v~~~~~~~~~ 100 (173)
+-.--+..+.....+++|++||-+|+| .|..+..+++..|++|+++..++++.+.+++.. |. + .-+...+.
T Consensus 46 AQ~~k~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~--- 121 (273)
T PF02353_consen 46 AQERKLDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY--- 121 (273)
T ss_dssp HHHHHHHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---
Confidence 333334445555667999999999997 677788888888999999999999988887643 31 1 11111111
Q ss_pred HHhcCCccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 101 QAAMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 101 ~~~~~~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
.++...+|.|+ +.+|.+ ..+..+.+.|+|||+++.-.
T Consensus 122 ~~~~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 122 RDLPGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp GG---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred cccCCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 22344899985 445433 23667889999999987543
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00012 Score=55.59 Aligned_cols=97 Identities=26% Similarity=0.244 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC---CC-EEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG---AD-SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+++++|+-+|+|. |..+..+++ .|+ +|++++.++...+.++++.. .. .+.... .+......+++|+++....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-cccccccCCCceEEEEecC
Confidence 6789999999986 777766665 565 89999999988887776432 11 111111 1111122348999997655
Q ss_pred Cc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 116 AV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 116 ~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.. ..+..+.+.|+|||.++..|...
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 43 23557789999999999988644
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.8e-05 Score=57.64 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHCCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..|...++.. ...++ +|.++++++++.+.+.+.+ +.. +....+ .++.....|+++.|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC---HHHHHhcCCEEEEcc
Confidence 5678999999999998777654 45676 8999999998877766544 332 222222 223446899999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCCCC-CcccCc
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPA 147 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 147 (173)
+....+- . ..+++|-.+..+|.... ...++.
T Consensus 201 ~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 201 NAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCCCcch-H-HhcCCCcEEEecCCCCcccccCCH
Confidence 9885433 3 78899999999997543 334443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00019 Score=58.72 Aligned_cols=76 Identities=22% Similarity=0.385 Sum_probs=57.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
.++++++|.|+ +++|...++.+...|++|+.++++.++++.+.++++... ..|-.+.+.+++. .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999998 899999999999999999999999888877766666432 3444444333222 257999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999875
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00021 Score=53.21 Aligned_cols=75 Identities=20% Similarity=0.301 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CC-C---EEeeCCChHHHHH----h---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA-D---SFLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~v~~~~~~~~~~~----~---~~ 105 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.+ +. . ...|-.+.+.+++ + .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999998 89999999999999999999999988766554432 11 1 1234444433322 2 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.2e-05 Score=56.85 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|+.+.+++..++..|+ +++++.|+.+|.+.+.+.++.... +............ .+|++|+|++...
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-~~dliINaTp~Gm 202 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-EADLLINATPVGM 202 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-ccCEEEECCCCCC
Confidence 458999999999999999999999997 899999999998888876663221 0111111111111 5899999998642
Q ss_pred chH-----HHHHhhhcCCEEEEeC
Q 030694 119 PLM-----PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 ~~~-----~~~~~l~~~G~~v~~g 137 (173)
.-. ....++++.-.+..+=
T Consensus 203 ~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 203 AGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCcHHhcCcCCEEEEec
Confidence 110 0145566666665553
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00022 Score=53.59 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.+.+. .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999998 999999999999999999999999888776666333211 2344444333222 2479999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+.+.|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999863
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=6.2e-05 Score=57.08 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|+.|.+++..+...|+ +|++++++.+|.+.+.+.++. ..+.... ...+....+|++|+|++
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 456899999999999999999999998 899999999988877665531 1222211 11223357999999975
Q ss_pred Ccc----chHHHHHhhhcCCEEEEeC
Q 030694 116 AVH----PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 116 ~~~----~~~~~~~~l~~~G~~v~~g 137 (173)
... ...-....++++..++.+-
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 320 0111123466666665554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00016 Score=58.28 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--chHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++ ++++.+.++++... ..|-.+.+.+.+. .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999998 9999999999999999999998743 33444444455332 3455554433322 2479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00019 Score=53.13 Aligned_cols=76 Identities=25% Similarity=0.377 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |.+|+.+++.+...|++|+++++++++.+.+.+.+ |... ..|-.+.+.+++. .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999999999999999987766554433 2211 1244444333322 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 89 d~li~~ag~~ 98 (255)
T PRK07523 89 DILVNNAGMQ 98 (255)
T ss_pred CEEEECCCCC
Confidence 9999999863
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00018 Score=52.53 Aligned_cols=75 Identities=23% Similarity=0.269 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEE--eeCCChHHHHH----h---cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSF--LVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~----~---~~~~d 108 (173)
.+.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+.. -+. .|..+.+.+.+ + .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999998 9999999999888999999999988877666554431 111 23333332222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00027 Score=53.17 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcch---HHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
+++++||.|+ + ++|...++.+...|++|++.+++++. .+.+.++.|.... .|-.+.+.++.+ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999998 4 89999999999999999999887532 2333232453322 344444333222 258
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+++++.|... .....+..|+.+|+++.+++..
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 999999998420 1223445666678998887544
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00018 Score=54.41 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 24 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 24 ~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
+++-......+..+...-+|++++|+|+|+ +|...+.++...|++|++..+... .+.+
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~~------------------ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLPE------------------ 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHHH------------------
Confidence 444433344455555557899999999976 999999999999998888766321 1111
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...++|++|.++|.+..+.. ..++++..++.+|...
T Consensus 199 ~~~~aDIvI~AtG~~~~v~~--~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIKK--DWIKQGAVVVDAGFHP 234 (283)
T ss_pred HhccCCEEEEccCCCCcCCH--HHcCCCCEEEEEEEee
Confidence 12478999999997754433 5589999999998543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.2e-05 Score=59.11 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=64.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
|+|+|+|.+|..+++.+...+- +|++.+++.++.+.+.+.+. ....+|..+.+.+.+...+.|+||+|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6899999999999999888764 89999999999888876422 12345666667778888899999999998744
Q ss_pred hHHHHHhhhcCCEEEEe
Q 030694 120 LMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~ 136 (173)
..-+-.|++.|-.++..
T Consensus 81 ~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHT-EEEES
T ss_pred HHHHHHHHHhCCCeecc
Confidence 44455666677777774
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00024 Score=52.94 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.+.+. .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 89999999999999999999999887766554432 322 1 2344554443322 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00023 Score=52.37 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CC---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--AD---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|+|+ |.+|..+++.+...|++|+++++++++.+.+...+. .. ...|-.+.+.++.. .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999998 999999999999999999999999887766655343 11 12233444333222 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999986
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.2e-05 Score=49.65 Aligned_cols=90 Identities=20% Similarity=0.170 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-++++|+|+|+|.+|..-++.+...|++|++++... +..+ +.-..... .+ +....+++++|-+++.+..-
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~~~---~~-~~~l~~~~lV~~at~d~~~n 74 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLIRR---EF-EEDLDGADLVFAATDDPELN 74 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEEES---S--GGGCTTESEEEE-SS-HHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHHhh---hH-HHHHhhheEEEecCCCHHHH
Confidence 368999999999999999999999999999999886 2222 22222221 11 23456899999999998654
Q ss_pred HHHHHhhhcCCEEEEeCCCC
Q 030694 121 MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~ 140 (173)
+......+..|..+.+...+
T Consensus 75 ~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 75 EAIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHHhhCCEEEEECCCc
Confidence 55566666688888886544
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00025 Score=54.45 Aligned_cols=94 Identities=21% Similarity=0.251 Sum_probs=65.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCccc---
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVHP--- 119 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~~--- 119 (173)
+|+|+|+ |.+|..+++.+...|.+|++++|+.++...+.. .+.+.+ .|..+.+.+.+...++|++|.+++....
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6999998 999999999999999999999998766554444 454332 2444555566666789999998764310
Q ss_pred ---------hHHHHHhhhcCC--EEEEeCCC
Q 030694 120 ---------LMPLIGLLKSQG--KLVLLGAP 139 (173)
Q Consensus 120 ---------~~~~~~~l~~~G--~~v~~g~~ 139 (173)
...+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 123445554444 78887753
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=9.8e-05 Score=51.81 Aligned_cols=90 Identities=23% Similarity=0.366 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CCEEeeCCChHHHHHhcCCccEEEEcCCCc--c-
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--H- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--~- 118 (173)
+|.|+|+ |.+|....+-++.+|..|++++|+++|....+. .. ...+++. ..+.+...++|+||++.|.. .
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-~~i~q~Difd~---~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-VTILQKDIFDL---TSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-ceeecccccCh---hhhHhhhcCCceEEEeccCCCCCh
Confidence 6889998 999999999999999999999999988765432 21 1113322 22334556999999999976 1
Q ss_pred ------chHHHHHhhhcCC--EEEEeCC
Q 030694 119 ------PLMPLIGLLKSQG--KLVLLGA 138 (173)
Q Consensus 119 ------~~~~~~~~l~~~G--~~v~~g~ 138 (173)
..+.++..++..| |++.+|.
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 1234666676644 7888874
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00031 Score=52.17 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=54.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CC---EEeeCCChHHHHH----h----cCCccEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD---SFLVSRDQDEMQA----A----MGTMDGI 110 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~---~v~~~~~~~~~~~----~----~~~~d~v 110 (173)
++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+..+ .. ...|-.+.+.+.+ . .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57999998 999999999999999999999999888777766443 11 1234444433222 2 3478999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+.+.|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999863
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0001 Score=54.12 Aligned_cols=76 Identities=21% Similarity=0.358 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhc---CCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAM---GTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~---~~~d~vid~~g 115 (173)
.++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.+.+.. +++|++|.+.|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 35789999998 899999999999999999999999887777666455432 23555544443332 47999999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 5
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00017 Score=52.10 Aligned_cols=99 Identities=25% Similarity=0.244 Sum_probs=66.4
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
....++++++||-+|+| .|..+..+++..+ .+|+.++.+++-.+.+++++ +. ..++..+..+... ..+.+
T Consensus 66 ~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~f 143 (205)
T PRK13944 66 ELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPF 143 (205)
T ss_pred HhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCc
Confidence 33344789999999987 4767777777654 58999999988777666533 32 1233322221111 12479
Q ss_pred cEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 108 d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
|.++-+.......+.+++.|++||+++..
T Consensus 144 D~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 144 DAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred cEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 99997776665566788999999998764
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00021 Score=55.09 Aligned_cols=97 Identities=22% Similarity=0.188 Sum_probs=68.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCEEeeCCChHHHHHh--cCCccEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSFLVSRDQDEMQAA--MGTMDGI 110 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~--~~~~d~v 110 (173)
..++++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++. .|.+.+... ..+..... .+.+|++
T Consensus 76 L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD~~~~~~~~~~fD~I 153 (322)
T PRK13943 76 VGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGDGYYGVPEFAPYDVI 153 (322)
T ss_pred cCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCChhhcccccCCccEE
Confidence 345889999999998 58888888887764 699999998877666553 454322111 11111111 2479999
Q ss_pred EEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 111 IDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+.+........++.|+++|+++..
T Consensus 154 i~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 154 FVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred EECCchHHhHHHHHHhcCCCCEEEEE
Confidence 99888765566788999999998764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0005 Score=51.51 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC----EEeeCCChHHHHH----h---cCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD----SFLVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~v~~~~~~~~~~~----~---~~~~d 108 (173)
++++|+|+ |++|..+++.+...|++|+++++++++.+.+.++ .+.. ...|-.+.+.+.+ + .+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899998 9999999999999999999999988766555332 2322 1245555433222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999985
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00051 Score=46.03 Aligned_cols=112 Identities=14% Similarity=0.064 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.++.+++++|.| .|...+..++..|.+|++++.+++..+.+++ .+.+.+.+.-. +.--++.+++|+++..-+.+...
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf-~p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLF-NPNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCC-CCCHHHHhcCCEEEEeCCCHHHH
Confidence 457889999999 8876666777889999999999999988888 66544433211 11112455899999999998755
Q ss_pred HHHHHhhhcCC-EEEEeCCCCCCcccCccccccCcc
Q 030694 121 MPLIGLLKSQG-KLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 121 ~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
..+++.-++-| -++..-........++.-..+|..
T Consensus 92 ~~~~~la~~~~~~~~i~~l~~e~~~~~~kl~ny~~~ 127 (134)
T PRK04148 92 PFILELAKKINVPLIIKPLSGEEPIKELKLINYKGK 127 (134)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCcceEEEecCCe
Confidence 55555544433 455444433332333333444444
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00022 Score=54.25 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=75.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++|.|+|. +.+|.-++.++...|++|++..+.... .
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 468887777777887776578999999998 699999999999999999998655331 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 197 ~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 223346799999999987666555 8999999999843
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.9e-06 Score=55.67 Aligned_cols=50 Identities=40% Similarity=0.500 Sum_probs=36.8
Q ss_pred cCCCEEeeCCChHHHHHhcCCccEEEEcCC--CccchHHHHHhhhcCCEEEEeCC
Q 030694 86 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 86 ~g~~~v~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+++++||++.++ .-.+++|++||++| +...+..++++| ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999997666 22469999999999 554456777888 9999999984
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00018 Score=54.59 Aligned_cols=129 Identities=25% Similarity=0.285 Sum_probs=79.6
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER 85 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~ 85 (173)
.++++.+++.+- ......|++..-..-..++++++++=+|+| .|.+++..++ +|+ +|++++.++...+.++++
T Consensus 131 ~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eN 204 (300)
T COG2264 131 LNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAAREN 204 (300)
T ss_pred eEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHHHH
Confidence 334444444333 334556655443333444799999999997 4766666655 777 799999998877777664
Q ss_pred c---CCCEEeeCCChHHHHHhc-CCccEEEEcCCCc---cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 86 L---GADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 86 ~---g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
. +....+............ +.+|+|+-+.=.. ...++..++++|+|++++.|....
T Consensus 205 a~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 205 ARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 2 222111011111222223 4899999777544 234577789999999999997653
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00037 Score=52.53 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcCCCE--EeeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADS--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~~ 106 (173)
.+++++|.|+ +++|+.+++.+...|++|+++++++ ++.+.+.+.++... ..|-.+.+.+++ + .++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999997 4899999999999999999998875 23444434355332 234444433222 2 258
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+|++|++.|... .....++.|+++|+++.+++..+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 999999998410 13355667777899998875443
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00022 Score=51.85 Aligned_cols=98 Identities=31% Similarity=0.334 Sum_probs=65.0
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
...++++++||-+|+| .|..+..+++..+. +|+.++.+++..+.+++.+ |.+ .++..+..+.. .....||+
T Consensus 72 ~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~ 149 (215)
T TIGR00080 72 LLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDR 149 (215)
T ss_pred HhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCE
Confidence 3345899999999987 46666777776553 6999999988777776543 322 22221111110 11247999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++-..........+++.|++||+++..
T Consensus 150 Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 150 IYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 986655555566888999999998765
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0002 Score=54.28 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|+.+.+++..+...|+ +++++.|+.+|.+.+.+.+. ...+ ...+.....+....+|++++|++
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecCHhHHHHHHhhcCEEEEcCC
Confidence 457899999999999999998888998 89999999988887766443 1112 11111111222347999999987
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 204 ~G 205 (283)
T PRK14027 204 MG 205 (283)
T ss_pred CC
Confidence 43
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00016 Score=53.55 Aligned_cols=75 Identities=21% Similarity=0.277 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
++++++|+|+ |++|..+++.+...|++|+++++++++.+...+.++.. ...|..+.+.+++. .+++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999998 99999999999999999999999888776665545533 22355554433322 247999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00062 Score=55.75 Aligned_cols=98 Identities=24% Similarity=0.358 Sum_probs=67.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
.+.+|+|+|+|.+|.++++.+...|+ +|+++.++.++.+.+.+.++...+ .....+...+...+.|++|.|++.+..
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 47899999999999999999999998 799999999998888776642211 111222233445689999999987632
Q ss_pred -hHHHHHhhhcC----C---EEEEeCCCC
Q 030694 120 -LMPLIGLLKSQ----G---KLVLLGAPE 140 (173)
Q Consensus 120 -~~~~~~~l~~~----G---~~v~~g~~~ 140 (173)
....+..+.++ + .++.++.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 23444444321 2 477777654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00015 Score=53.77 Aligned_cols=77 Identities=19% Similarity=0.313 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC----EEeeCCChHHHHH-------hcCCcc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~-------~~~~~d 108 (173)
.++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+.. ...|..+.+.+.+ ..+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999998 99999999999999999999999887776665534322 2234444433322 225899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
.+|.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999999864
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00041 Score=52.75 Aligned_cols=77 Identities=14% Similarity=0.210 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc---hHHHHHHHcCCC-----EEeeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---KKSEAVERLGAD-----SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~---~~~~~~~~~g~~-----~v~~~~~~~~~~~~~~~~d~vi 111 (173)
.++++++|+|+|+.+.+++..+...|+ +++++.|+++ |.+.+.+.++.. .+....+...+.+...++|+++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 467899999999899887777777888 8999999854 655555545421 1211111111222335799999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
+|++-.
T Consensus 202 NaTp~G 207 (288)
T PRK12749 202 NGTKVG 207 (288)
T ss_pred ECCCCC
Confidence 998753
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00068 Score=50.06 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=52.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH----h---cCCccEEEEc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MGTMDGIIDT 113 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~~~d~vid~ 113 (173)
+++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++.+. ..|-.+.+.+.+ + .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899998 999999999999999999999999888777766455332 123334332222 1 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00023 Score=58.04 Aligned_cols=73 Identities=19% Similarity=0.243 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+.++++|+|+|.|.+|++++++++..|++|++.+.++++.+.+++ .|... +...... +....+|+++.+.|.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~-~~~~~~~---~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVAT-VSTSDAV---QQIADYALVVTSPGFR 81 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEE-EcCcchH---hHhhcCCEEEECCCCC
Confidence 356899999999999999999999999999999987766666655 67643 3222211 1224689999999987
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00042 Score=50.95 Aligned_cols=73 Identities=16% Similarity=0.039 Sum_probs=51.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhc----CCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAM----GTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~----~~~d~vid~~g~ 116 (173)
.+++|.|+ |++|...++.+...|++|+++++++++.+.+.+..... ...|-.+.+.+.+.. ...|.++.+.|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 57899998 99999999988889999999999988877776522211 123444544443332 346777777763
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00051 Score=50.56 Aligned_cols=98 Identities=19% Similarity=0.295 Sum_probs=62.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
++++++|.|+ |++|..+++.+...|++|+++.++.+ +.+.+... .+... ..|..+.+.+.+. .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999998 99999999999999999999888653 33333221 23221 2344444433222 247
Q ss_pred ccEEEEcCCCc-------------------cchHHHHHhhhcCCEEEEeCCC
Q 030694 107 MDGIIDTVSAV-------------------HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 107 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+|++|.+.|.. ..++.+.+.+..+|+++.+++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 99999888653 1233444555566888888753
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00017 Score=53.56 Aligned_cols=74 Identities=20% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+++++|.|+ |++|...++.+...|++|+++++++. +.+.... ... ....|-.+.+.+.+..+++|++|++.|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4689999998 89999999999999999999998763 2222111 111 1234555555556666789999999985
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0003 Score=51.99 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC---E-EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---S-FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-v~~~~~~~~~~~~-------~~ 105 (173)
++++++|.|+ |++|...++.+...|++|+++.+++++.+.+.+.+ +.. . ..|-.+.+.+.+. .+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999999888776554433 221 1 2244444333222 24
Q ss_pred CccEEEEcCC
Q 030694 106 TMDGIIDTVS 115 (173)
Q Consensus 106 ~~d~vid~~g 115 (173)
++|++|.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6999999986
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00069 Score=50.05 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |.+|...++.....|++|+++++++++.+.+...+ +.. ...|-.+.+.+.+. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999998 99999999999999999999999988766554433 322 12244444333222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00021 Score=54.78 Aligned_cols=93 Identities=18% Similarity=0.236 Sum_probs=65.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
..+|.|+|+|.+|...++.++..|. +|+++++++++.+.+++ .|....+..+ ..+...+.|++|.|++....
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~~----~~~~~~~aDvViiavp~~~~~ 80 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTTS----AAEAVKGADLVILCVPVGASG 80 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecCC----HHHHhcCCCEEEECCCHHHHH
Confidence 4689999999999999998888885 89999999988888877 7742211111 12234579999999997631
Q ss_pred --hHHHHHhhhcCCEEEEeCCCC
Q 030694 120 --LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 --~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+......++++..++.+|...
T Consensus 81 ~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 81 AVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHhhCCCCCEEEeCccch
Confidence 223334566777777776543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00055 Score=50.74 Aligned_cols=75 Identities=12% Similarity=0.235 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHH----H---HhcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEM----Q---AAMG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~----~---~~~~ 105 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.+. ..|-.+.+.+ + +..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999999887766554433 2111 1233333322 1 2235
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 89999999986
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00054 Score=51.41 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=53.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH----h---cCCccEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
+++++|.|+ |++|..+++.+...|++|++++++.++++.+.+.++... ..|..+.+.+.+ + .+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999998 999999999998899999999999887776666444221 123334332222 1 24799999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
.+.|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 999864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00052 Score=51.49 Aligned_cols=74 Identities=16% Similarity=0.315 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ +++|...++.+...|++|++++++ ++.+.+.+++ +.. ...|-.+.+.+.. + .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999998 899999999999999999999998 5544433323 321 1234444332222 2 2579
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00012 Score=50.85 Aligned_cols=90 Identities=23% Similarity=0.349 Sum_probs=61.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|-++|.|.+|...++-+...|++|++.++++++.+.+.+ .|.... .+..+ .....|++|-|+.+.......
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~--~s~~e----~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA--DSPAE----AAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE--SSHHH----HHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh--hhhhh----HhhcccceEeecccchhhhhh
Confidence 47889999999999999999999999999999999999988 564322 22222 233569999999986444443
Q ss_pred ------HHhhhcCCEEEEeCCCC
Q 030694 124 ------IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ------~~~l~~~G~~v~~g~~~ 140 (173)
+..++++..++.++..+
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhHHhhccccceEEEecCCcc
Confidence 44456677777777554
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0003 Score=53.52 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=73.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
-+||+....+..+..+..--.|++|.|+|. +.+|.-++.++...|+.|+++. ++.+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence 467877777777777766578999999995 9999999999999999999984 4321
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.++.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 1223446799999999987665554 8999999999853
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00066 Score=48.86 Aligned_cols=80 Identities=21% Similarity=0.154 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc-CCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~ 119 (173)
-+|++++|+|.|.+|..+++.+...|++|++.++++++.+.+.+.+|... ++.. ++. ..+|+++-|......
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~------~l~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE------EIYSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch------hhccccCCEEEeccccccc
Confidence 46889999999999999999999999999999999988888877567542 2321 111 257777755443323
Q ss_pred hHHHHHhh
Q 030694 120 LMPLIGLL 127 (173)
Q Consensus 120 ~~~~~~~l 127 (173)
....+..|
T Consensus 99 ~~~~~~~l 106 (200)
T cd01075 99 NDDTIPQL 106 (200)
T ss_pred CHHHHHHc
Confidence 33444445
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00044 Score=50.38 Aligned_cols=75 Identities=21% Similarity=0.376 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-EeeCCChHHHHH-------hcCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-FLVSRDQDEMQA-------AMGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~~-------~~~~~d~ 109 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.....+.+ +... ..|..+.+.+.+ ..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999998 99999999999889999999999876644332222 2221 133333332222 2347999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999875
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00056 Score=51.04 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ + ++|...++.+...|++|++..+++. +.+.+.+..|.... .|-.+.+.+++. .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999998 4 7999999988889999999887642 23333332353322 344444333222 257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0002 Score=53.35 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHH----h---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQA----A---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~----~---~~~~d~v 110 (173)
++++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.++.. . ..|-.+.+.+++ . .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999998 89999999999999999999999988887776655532 1 223333332222 1 2479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00053 Score=51.69 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C--CCEEeeCCChHHHHH-------hcCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G--ADSFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g--~~~v~~~~~~~~~~~-------~~~~~d 108 (173)
.|+.|||.|+ +++|+..++-...+|+++++++.+.+-.++-.++. | ..++.|-++.+.+.+ ..+.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 5899999998 79999998888889999999998877554444422 4 134556666543332 345899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
+++++.|..
T Consensus 117 ILVNNAGI~ 125 (300)
T KOG1201|consen 117 ILVNNAGIV 125 (300)
T ss_pred EEEeccccc
Confidence 999999975
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00014 Score=55.26 Aligned_cols=76 Identities=21% Similarity=0.338 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++++.+.+.+ +.. .. .|-.+.+.+.+. .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 99999999999999999999999988776665433 322 11 233343332222 3489
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999999853
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00054 Score=51.01 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHh------cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAA------MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~------~~~~d~ 109 (173)
++++++|+|+ |++|...++.+...|++|+++++++++.+.+...+ +.. .. .|-.+.+.+... .+++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999998 99999999999999999999999988777665533 211 11 233333322222 257999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999886
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00028 Score=54.06 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
....+++|+|+|..|.+.++.+.. .+. +|.++.+++++.+.+.+++... .+. . +..++...+.|+++.|++.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence 567899999999999998888764 665 7999999999888777756421 121 1 1223344689999999998
Q ss_pred ccchHHHHHhhhcCCEEEEeCCCC-CCcccC
Q 030694 117 VHPLMPLIGLLKSQGKLVLLGAPE-KPLELP 146 (173)
Q Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 146 (173)
...+-..+ ++||-.+..+|... +...++
T Consensus 199 ~~Pl~~~~--~~~g~hi~~iGs~~p~~~El~ 227 (304)
T PRK07340 199 RTPVYPEA--ARAGRLVVAVGAFTPDMAELA 227 (304)
T ss_pred CCceeCcc--CCCCCEEEecCCCCCCcccCC
Confidence 75433333 78999999999654 334555
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0005 Score=51.79 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++++.+.+.+ +... ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 99999999999999999999999887766554433 3221 2233343333222 3479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0014 Score=48.07 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=65.7
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe---EEEEeCC----cchH--------HHHHHHcCCCEEeeCC
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK--------SEAVERLGADSFLVSR 95 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~---v~~~~~~----~~~~--------~~~~~~~g~~~v~~~~ 95 (173)
..++.....--++.+++|+|+|+.|..++..+...|++ +++++++ .+|. +.++. ++... .+
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~-~~~~~-~~-- 88 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKE-TNPEK-TG-- 88 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHH-hccCc-cc--
Confidence 34454444335678999999999999999998889975 9999998 4442 22233 43211 11
Q ss_pred ChHHHHHhcCCccEEEEcCCCccch-HHHHHhhhcCCEEEEeCCC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ +.+...++|++|++++.. .+ ...++.|+++..+..+..+
T Consensus 89 -~~-l~~~l~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 89 -GT-LKEALKGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred -CC-HHHHHhcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeCCC
Confidence 12 212334699999999843 34 3667778777766655533
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00028 Score=48.82 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.|++|+|+|+|.+|..-++.+...|++|++++ ++..+.+.+ ++.-.. ... .+......++|+++-+++... .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~-l~~i~~-~~~--~~~~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMKE-LPYITW-KQK--TFSNDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh-ccCcEE-Eec--ccChhcCCCceEEEECCCCHH-H
Confidence 468999999999999999998888999999885 344455555 553222 211 111122358999999999985 5
Q ss_pred HHHHHhhhcCCEEEEe
Q 030694 121 MPLIGLLKSQGKLVLL 136 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~ 136 (173)
+..+...++.+.++..
T Consensus 84 N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 84 NMMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHHCCcEEE
Confidence 6555555444434443
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00038 Score=48.23 Aligned_cols=95 Identities=20% Similarity=0.321 Sum_probs=63.1
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|+......+.++.
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------ 75 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ 75 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------
Confidence 5678887777888888776678999999998 689999999999999999987665433322
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.....|+++.++|.+..+.. ..+++|..++.+|.
T Consensus 76 ---~~~~ADIVVsa~G~~~~i~~--~~ik~gavVIDvG~ 109 (160)
T PF02882_consen 76 ---ITRRADIVVSAVGKPNLIKA--DWIKPGAVVIDVGI 109 (160)
T ss_dssp ---HHTTSSEEEE-SSSTT-B-G--GGS-TTEEEEE--C
T ss_pred ---eeeeccEEeeeecccccccc--ccccCCcEEEecCC
Confidence 23357899999998865443 35788888998885
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00057 Score=50.63 Aligned_cols=75 Identities=16% Similarity=0.312 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEE---eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~~ 107 (173)
+++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+. .+.... .|-.+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999998766555443 333221 233444333222 2469
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00027 Score=52.65 Aligned_cols=75 Identities=27% Similarity=0.277 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHH----HHh---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEM----QAA---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~----~~~---~~~~d~v 110 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+.. . ..|-.+.+.. ++. .+++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999998 89999999999999999999999988777776644422 1 1243443222 222 2579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00053 Score=50.93 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-EE--eeCCChHHHHHh---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF--LVSRDQDEMQAA---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~---~~~~d~v 110 (173)
++++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.+ +.. .. .|-.+.+.+.+. .+++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999998 89999999999999999999999988766654433 321 11 233343333332 3579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999885
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00034 Score=55.34 Aligned_cols=96 Identities=27% Similarity=0.408 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+.++||+|+|-+|..++..+...|. +|++..|+.+|...+.+++|+..+ ..+.+......+|++|.+++.+..
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCcc
Confidence 478999999999999999999999996 899999999998888777995433 234444455689999999998732
Q ss_pred ---hHHHHHhhhcC-C-EEEEeCCCC
Q 030694 120 ---LMPLIGLLKSQ-G-KLVLLGAPE 140 (173)
Q Consensus 120 ---~~~~~~~l~~~-G-~~v~~g~~~ 140 (173)
-......++.. . .++.++.+.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 11333344332 2 466777654
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00034 Score=51.53 Aligned_cols=102 Identities=25% Similarity=0.311 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---CE-EeeCCChHHHHHhcCCccEEEEc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
..++|++||=+|+| +|-.+..+++..|- +|++++.+++-++.+++.... .. -+...+...+.-....+|.+..+
T Consensus 48 ~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~ 126 (238)
T COG2226 48 GIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTIS 126 (238)
T ss_pred CCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEee
Confidence 33589999999877 68888999998875 999999999988888885442 11 01122222222122379999888
Q ss_pred CCCc------cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 114 VSAV------HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 114 ~g~~------~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.|-. ..+..+.+.|+|||+++.+.....
T Consensus 127 fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 127 FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred ehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 7765 257788999999999998876554
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00066 Score=51.08 Aligned_cols=97 Identities=22% Similarity=0.328 Sum_probs=63.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh------cCCccEE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA------MGTMDGI 110 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~------~~~~d~v 110 (173)
+++++|.|+|++|..+++.+. .|++|+++++++++.+.+.+++ |.+ . ..|-.+.+.+.+. .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357888898899999998885 7999999999887766554433 322 1 2344443322222 2479999
Q ss_pred EEcCCCcc------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVH------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
|.+.|... .++.++..++++|+++.+++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99998531 1234445566677777776543
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00098 Score=49.65 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=64.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcC-CC---EEeeCCChHHH----HHh---c
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLG-AD---SFLVSRDQDEM----QAA---M 104 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g-~~---~v~~~~~~~~~----~~~---~ 104 (173)
.+++++|.|+ +++|..+++.....|++|+++.+++ ++++.+.+++. .. ...|-.+.+.+ +++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5789999997 4999999999999999999987643 44555554442 11 12344443322 222 2
Q ss_pred CCccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++|+++++.|... .....++.|+++|+++.+++..+
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 57999999887320 01234556667899998886544
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0011 Score=49.10 Aligned_cols=75 Identities=20% Similarity=0.388 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-E--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (173)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... . .|-.+.+.+.+. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999999999999999887766554433 2211 1 233343332222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0013 Score=44.64 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=71.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
.+|+.....+..+..+..--.|++++|+|. ..+|.-++.++...|++|+...++...++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 456666666666777665578999999998 78999999999999999999876543222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.....|+++.++|.+..+... .+++|..++.+|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i~~~--~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKVPTE--WIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCccCHH--HcCCCCEEEEcCCCc
Confidence 2234678999999988655544 489999998888543
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00043 Score=54.61 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~- 120 (173)
.|++|.|+|.|.+|..+++.++..|++|.+.++.....+.... +|.... . .++++....|+++-+++.....
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 5789999999999999999999999999999987643333333 553211 1 2345566789998888854221
Q ss_pred ----HHHHHhhhcCCEEEEeCC
Q 030694 121 ----MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ----~~~~~~l~~~G~~v~~g~ 138 (173)
...+..|+++..+|.++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 256778888888887764
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00031 Score=55.39 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=64.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|++|.|+|.|.+|...++.++..|++|++.+++....+...+ .|.... +.++++....|+++-+++....
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE------EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 6889999999999999999999999999999877543333333 553321 1233455678899888875421
Q ss_pred --h-HHHHHhhhcCCEEEEeCC
Q 030694 120 --L-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 --~-~~~~~~l~~~G~~v~~g~ 138 (173)
+ ...+..|+++..+|.++.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 1 256778888888887764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00034 Score=52.10 Aligned_cols=70 Identities=14% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH----h---cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA----A---MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~---~~~~d~vid~ 113 (173)
++++++|.|+ |++|...++.+...|++|+++++++.+.. + .- ....|-.+.+.+.+ + .+++|++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~---~-~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN---D-VD-YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC---c-eE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4789999998 89999999999999999999998765432 1 10 11234444433222 2 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 885
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00086 Score=49.75 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=63.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-C---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~g---~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
.+++++|.|++ ++|...++.+...|++|++++++++..+.+++ +.. . ...|-.+.+.+++ + .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999973 89999999999999999999887433333333 321 1 1233344332222 2 2579
Q ss_pred cEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|+++++.|... .....+..++.+|+++.+++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 99999987420 12234566667789888875443
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0007 Score=51.12 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=73.6
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.-++.+++..|++|++..+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 468887777888887776567999999998 569999999999999999888654221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++.++|.+..+.. ..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 2334468999999999865444 668999999999943
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00029 Score=52.36 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CC---EEeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD---SFLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~v~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++. .. ...|..+.+.+.+. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999998 999999999999999999999998887766655432 11 12243443322222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999985
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00028 Score=53.46 Aligned_cols=77 Identities=25% Similarity=0.257 Sum_probs=58.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee---C-----CCh----HHHHHh---c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV---S-----RDQ----DEMQAA---M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~---~-----~~~----~~~~~~---~ 104 (173)
++..+++|.|+ .++|++.+..++..|++|+++.++.+|+..+++.++..+.+. + .+. ..++++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578999987 899999999999999999999999999999998777322211 1 111 122222 3
Q ss_pred CCccEEEEcCCCc
Q 030694 105 GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ~~~d~vid~~g~~ 117 (173)
+.+|.+|.|.|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 5899999999984
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0011 Score=49.29 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=64.7
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCcch---HHHHHHHcCCCEE--eeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~g---~~G~~a~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~----~---~~~ 106 (173)
++++++|.|++ ++|..+++.....|++|++++++++. .+.+.++++.... .|-.+.+.+++ + .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999973 89999999999999999999887543 3333333443222 23333332222 2 257
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+++++.|... ..+.++..|+.+|+++.+++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 999999987420 1234566677778988876543
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00067 Score=51.27 Aligned_cols=95 Identities=19% Similarity=0.261 Sum_probs=73.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. +.+|.-++.++...|++|++..+... .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence 467877777777777776578999999998 56699999999999999988543221 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence 2334468999999998865554 679999999999954
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00048 Score=51.92 Aligned_cols=77 Identities=17% Similarity=0.267 Sum_probs=54.9
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++..... ..+++++|+|+|+.+++++..++..|+ +|+++.|+.+|.+.+.+.++... . +.. ....+|++
T Consensus 112 ~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dlv 182 (272)
T PRK12550 112 KLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADIL 182 (272)
T ss_pred HHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCEE
Confidence 34443333 456799999999999999999999998 69999999998888776554211 0 111 12358999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
|+|++..
T Consensus 183 INaTp~G 189 (272)
T PRK12550 183 VNVTPIG 189 (272)
T ss_pred EECCccc
Confidence 9998743
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0013 Score=50.15 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=63.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHH---HcCCCEE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVE---RLGADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
.++++||.|+ |++|..+++.+...|++|+++.++.+. .+...+ ..|.... .|-.+.+.+++. .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999998 999999999999999999888765332 222221 1343221 233443332222 34
Q ss_pred CccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|.+.|... ..+.+++.|+++|+++.+++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 8999999998520 1224445566788999887654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00068 Score=51.73 Aligned_cols=76 Identities=25% Similarity=0.290 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCC-E--EeeCCChHHHH----Hh---c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQ----AA---M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~----~~---~ 104 (173)
..+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. . ..|-.+.+.++ ++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 36789999998 99999999999889999999999877655443322 111 1 22434433222 22 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|.+.|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 479999999984
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00099 Score=50.10 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=64.6
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcCCCE--EeeCCChHHHHH----h---cC
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADS--FLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~ 105 (173)
-.+++++|.|+ +++|+..++.+...|++|+++.+++ ++.+.+.++++... ..|-.+.+.+++ + .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 35789999987 5899999999999999999887763 34444444355322 234334332222 2 24
Q ss_pred CccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|+++++.|... ....++..++.+|+++.+++..
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 7999999987420 1223455666779988887543
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0013 Score=48.72 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hH-HHHHHHcCCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KK-SEAVERLGADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~-~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ +++|..+++.+...|++|+++++++. +. +.+++ .+.+. ..|-.+.+.+++. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 89999999999999999998887543 21 22222 44321 2344444433332 25799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
+++.+.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999885
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00047 Score=51.00 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=53.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCChHHHHHhc-CCccEEEEcC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAAM-GTMDGIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~-~~~d~vid~~ 114 (173)
+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. ...|..+.+.+.+.. +++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 468999998 9999999999999999999999987766555442 2221 123555554444433 4899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 84
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00041 Score=50.45 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----------------EeeCCChHHHHHh
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----------------FLVSRDQDEMQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----------------v~~~~~~~~~~~~ 103 (173)
.++.++|+.|+| .|.-+..++. .|++|++++.++.-.+.+.++.+... ++..+-.+.-...
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 567899999998 5777777765 89999999999998877544333211 0000000110111
Q ss_pred cCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEEeCC
Q 030694 104 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 104 ~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.+.+|.++|+..-- ..+..+.+.|+|||+++..+.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 24689999976421 236688899999998666653
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00072 Score=51.05 Aligned_cols=95 Identities=15% Similarity=0.231 Sum_probs=73.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|+++.|+|. |.+|.-++.++...|++|++.-.... ..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 467777777777777776578999999998 89999999999999999998732211 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin 232 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMN 232 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEecce
Confidence 233446899999999997666654 9999999999854
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00062 Score=49.66 Aligned_cols=92 Identities=15% Similarity=0.044 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.++.+|||+|+|.++.-=++.+...|++|+++...-. .+..+.+ .|.-..+. .. +......++++||-|+..+.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~--~~~~dl~g~~LViaATdD~~- 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GN--YDKEFIKDKHLIVIATDDEK- 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CC--CChHHhCCCcEEEECCCCHH-
Confidence 3578999999999998888888889999999987543 2333333 34322322 11 11122358999999999985
Q ss_pred hHHHHHhh-hcCCEEEEeC
Q 030694 120 LMPLIGLL-KSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l-~~~G~~v~~g 137 (173)
++..+... +..+.++...
T Consensus 98 vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 98 LNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHHcCCeEEEc
Confidence 55555444 4446655554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00038 Score=51.56 Aligned_cols=75 Identities=12% Similarity=0.215 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|-.+.+.+.+. .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999988776665433 322 12344444333222 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00082 Score=50.07 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=63.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcc------hHHHHHHHcCCCE--EeeCCChHHHHH----h---
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAVERLGADS--FLVSRDQDEMQA----A--- 103 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~------~~~~~~~~~g~~~--v~~~~~~~~~~~----~--- 103 (173)
.+++++|.|+ +++|+..++.+...|++|+++.++.+ ..+.+.+..+... ..|-.+.+.+++ +
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4789999996 48999999999999999988764332 2333333222111 234444433322 2
Q ss_pred cCCccEEEEcCCCc-------c----------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 104 MGTMDGIIDTVSAV-------H----------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 104 ~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++|+++++.|.. . ..+.+++.|+++|+++.+++..+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 25799999999842 0 12345667777899998876443
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00039 Score=51.49 Aligned_cols=76 Identities=26% Similarity=0.336 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CCEE--eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-ADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
..+++++|.|+ |.+|..+++.+...|++|+++.+++++++.+...+ + ...+ .|-.+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45799999998 99999999999999999999999988876665432 2 1112 233333322222 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 9999999985
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00063 Score=50.63 Aligned_cols=76 Identities=20% Similarity=0.344 Sum_probs=54.4
Q ss_pred CCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCEE----eeCCChHHHHHh-------
Q 030694 41 KPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADSF----LVSRDQDEMQAA------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~------- 103 (173)
.++++++|.|+ | ++|..+++.+...|++|+++++++++.+...+. ++...+ .|..+.+.+++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999997 6 799999999999999999999988776655442 342222 244444333222
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|++|.+.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2579999999985
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0011 Score=49.99 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++|+|+|.| .+|.-++.++...|++|++.-.... .+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~l 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------DL 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------HH
Confidence 4678877777778777665689999999985 9999999999999999988743221 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|.
T Consensus 195 ~~~~~~ADIvV~AvG~p~~i~~--~~vk~GavVIDvGi 230 (285)
T PRK14191 195 SFYTQNADIVCVGVGKPDLIKA--SMVKKGAVVVDIGI 230 (285)
T ss_pred HHHHHhCCEEEEecCCCCcCCH--HHcCCCcEEEEeec
Confidence 2334468999999999865543 35799999999995
|
|
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00025 Score=57.52 Aligned_cols=75 Identities=21% Similarity=0.359 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCCh-H-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRDQ-D- 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~-~- 98 (173)
.+++|+|+|+|+.|+.++..++..|.+|+++++.+. ..+.+++ +|.+..++.... +
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCcc
Confidence 578999999999999999999999999999987642 3455555 786654443211 1
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 030694 99 EMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~ 117 (173)
...+...++|.+|.++|..
T Consensus 219 ~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred CHHHHHhcCCEEEEEeCCC
Confidence 1222334799999999985
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0015 Score=48.36 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-CCCEE-eeCCC-hHHHHHhc-CCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-GADSF-LVSRD-QDEMQAAM-GTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-g~~~v-~~~~~-~~~~~~~~-~~~d~vid~~g 115 (173)
..+.+++|+|+ |.+|..+++.+...|++|+++.++.++........ +...+ .|..+ ...+.+.. .++|++|.+.|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g 94 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG 94 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence 34689999998 99999999998889999999999877654332211 12211 24433 23333334 48999999887
Q ss_pred Ccc-------------chHHHHHhhhcC--CEEEEeCCC
Q 030694 116 AVH-------------PLMPLIGLLKSQ--GKLVLLGAP 139 (173)
Q Consensus 116 ~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 139 (173)
... ....+++.++.. ++++.++..
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 531 123444545433 588887754
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00063 Score=54.13 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CC-EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
++++++|.|+ |++|...++.....|++|+++++++++.+...+..+ .. ...|-.+.+.+.+..+++|++|.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999998 999999999988899999999988766543322112 11 123555556566666789999998875
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0006 Score=50.53 Aligned_cols=76 Identities=18% Similarity=0.309 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHH----HHh---cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEM----QAA---MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~----~~~---~~~~d~ 109 (173)
.++++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.++... ..|-.+.+.+ +++ .+++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999998 999999999999999999999988776665554455321 2333443332 222 246999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999985
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00057 Score=52.91 Aligned_cols=94 Identities=17% Similarity=0.274 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..+.+.+..+. ..+. +|+++.++.+|.+.+.+.+ |.. +.... ..++...+.|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhccCCEEEEec
Confidence 45679999999999988887776 4675 8999999999877776544 322 22222 2233445899999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+....+- ....++++-.+..+|..
T Consensus 203 ~s~~p~i-~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPIL-HAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCCCcEe-cHHHcCCCcEEEeeCCC
Confidence 8763211 12357888888888854
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=48.78 Aligned_cols=100 Identities=15% Similarity=0.213 Sum_probs=62.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHc---CCCEE---eeCCChH----HHHHh------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERL---GADSF---LVSRDQD----EMQAA------ 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~---g~~~v---~~~~~~~----~~~~~------ 103 (173)
.+++++|.|+ |++|..+++.+...|++|++.. +++++.+....++ +.... .|-.+.+ ..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4789999998 8999999999999999998875 4445444333222 32211 1222221 11111
Q ss_pred -c--CCccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 104 -M--GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 104 -~--~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
. +++|+++.+.|... ....+++.+++.|+++.+++..+
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 1 27999999988420 12235566667799999986654
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00077 Score=51.05 Aligned_cols=111 Identities=17% Similarity=0.232 Sum_probs=74.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----C---CEEeeCCChHH-HHHh----cC-C
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----A---DSFLVSRDQDE-MQAA----MG-T 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~---~~v~~~~~~~~-~~~~----~~-~ 106 (173)
+-|+..+|.|+ .++|...+.-+..+|.+|+.+.|+++|++..+++.. . ..++|...++. .+.+ .+ .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 34788999999 799988777777799999999999999988877554 1 12456655442 2222 22 5
Q ss_pred ccEEEEcCCCcc---------------------------chHHHHHhh--hcCCEEEEeCCCCCCcccCccccc
Q 030694 107 MDGIIDTVSAVH---------------------------PLMPLIGLL--KSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 107 ~d~vid~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+-+.++++|-.. ..+..+..| ++.|.++.+|+..+-.+++....+
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~y 200 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVY 200 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHH
Confidence 777889998642 011222222 355899999988876666654444
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0016 Score=48.96 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC--C-E--EeeCCChHHHHH---h---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA--D-S--FLVSRDQDEMQA---A---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~--~-~--v~~~~~~~~~~~---~---~~~~ 107 (173)
+++++|.|+ |.+|...++.+...|++|+++++++++.+.+.+. .+. . . ..|..+.+.++. . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 578999998 9999999999999999999999988776555432 121 1 1 234444433322 2 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00024 Score=59.78 Aligned_cols=75 Identities=20% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCC--hH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRD--QD 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~~ 98 (173)
.+++|+|+|+|+.|+.++..++..|.+|+++++.+. +.+.+++ +|.+..++... .-
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987763 3455555 77665544321 11
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 030694 99 EMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~ 117 (173)
.+.++..++|.+|.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2233445899999999974
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00073 Score=50.48 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.. .+.. ...|..+.+.+++. .+++|++|.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999998 9999999999999999999999987654322 1222 23344454433332 247999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9986
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00048 Score=51.94 Aligned_cols=76 Identities=20% Similarity=0.334 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.++++||.|+ |++|..+++.+...|++|++++++.++++...+.+ +... ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999998 99999999999999999999999877666554433 3221 1233343333322 2478
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999863
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00066 Score=52.70 Aligned_cols=88 Identities=23% Similarity=0.367 Sum_probs=63.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.+++.+.. .... .+... . ...++....|+++-+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAEY----R---PLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence 57899999999999999999999999999999875432 2222 44321 1 23344557889988887542
Q ss_pred -ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..++.++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 12 366778888888887764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0004 Score=53.34 Aligned_cols=75 Identities=23% Similarity=0.216 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----C-CC-E--EeeCCChHHHHH----h---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G-AD-S--FLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g-~~-~--v~~~~~~~~~~~----~---~~ 105 (173)
.+++++|.|+ +++|..+++.+...|++|+++++++++.+.+.+++ + .. . ..|-.+.+.+++ + .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999998 89999999999999999999999988766554432 1 11 1 234444333222 2 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999999885
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00062 Score=49.07 Aligned_cols=77 Identities=25% Similarity=0.457 Sum_probs=51.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------chHHHHHHH---cCCC-EE--eeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAVER---LGAD-SF--LVSR 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~-------------------~~~~~~~~~---~g~~-~v--~~~~ 95 (173)
.+.+|+|+|+|++|..+++.+...|. ++++++.+. .|.+.+.+. +... .+ ++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 46889999999999999999999998 899998772 222222222 2221 11 1111
Q ss_pred -ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 -~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+.+...+...++|++|+|+.+..
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~ 123 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFA 123 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHH
Confidence 12334445568999999998874
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00065 Score=51.06 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++. . ...|-.+.+.+.+. .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999999989999999999887766555544432 1 12344444433332 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0017 Score=48.15 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
..+++++|.|+ |++|..+++.+...|++ |+++++++++....... .+... ..|..+.+.+.+. .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35788999998 99999999999999998 99999887655533221 34321 2344444433322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999985
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0026 Score=48.38 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=74.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-C---CCEEeeCCChHHHHHh-------c--CC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-G---ADSFLVSRDQDEMQAA-------M--GT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-g---~~~v~~~~~~~~~~~~-------~--~~ 106 (173)
.+++.|+|.|+ .+.|..++.-+...|++|++.+.+++..+.++... . .+..+|-..++.+++. . .+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45677999999 89999999999999999999999888878777744 2 1224455555433332 2 27
Q ss_pred ccEEEEcCCCc--------------------------cchHHHHHhhhc-CCEEEEeCCCCCCcccC
Q 030694 107 MDGIIDTVSAV--------------------------HPLMPLIGLLKS-QGKLVLLGAPEKPLELP 146 (173)
Q Consensus 107 ~d~vid~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~ 146 (173)
.--++++.|.. ......+..+++ .||+|.+++..|..+.|
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p 173 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP 173 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc
Confidence 88889999832 112344555654 49999999887765553
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00058 Score=53.28 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CCEEeeC-CChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLVS-RDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~~-~~~~~~~~~~~~~d~vid~~ 114 (173)
-.|+++.|+|.|.+|..+++.++..|++|++.+++..+... .. ++ .....+. .....+.++....|+++.++
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35889999999999999999999999999999886432111 10 10 0000000 01223445566789999888
Q ss_pred CCcc----c-hHHHHHhhhcCCEEEEeCC
Q 030694 115 SAVH----P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 115 g~~~----~-~~~~~~~l~~~G~~v~~g~ 138 (173)
+... . -...+..|+++..+|.++.
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 7532 1 2367788899888888863
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0011 Score=49.85 Aligned_cols=95 Identities=16% Similarity=0.231 Sum_probs=73.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.+....|++|++..+... .+
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------NL 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------HH
Confidence 467777777777877776578999999998 58999999999999999988776532 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|++|.++|.+..+...+ +++|..++.+|..
T Consensus 190 ~~~~~~ADIvI~Avgk~~lv~~~~--vk~GavVIDVgi~ 226 (279)
T PRK14178 190 KAELRQADILVSAAGKAGFITPDM--VKPGATVIDVGIN 226 (279)
T ss_pred HHHHhhCCEEEECCCcccccCHHH--cCCCcEEEEeecc
Confidence 233446899999999775555444 7999999999965
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0016 Score=48.32 Aligned_cols=74 Identities=28% Similarity=0.341 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++.. ..+.+++ +.+ ...|-.+.+.+.+ + .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 999999999999999999999987532 2222212 322 1234444332222 2 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999974
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0023 Score=48.05 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCC----C--EEeeCCChHHHHHhcCCccEEE-E
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGA----D--SFLVSRDQDEMQAAMGTMDGII-D 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~~~d~vi-d 112 (173)
.+.++||++|+|+ |..+..+++.. +.++++++.+++-.+.+++.++. . .++..+..+.+.+..+.+|+|+ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4568899999873 66777777766 45999999999988888886552 1 2344443455555556899997 3
Q ss_pred cCCC---------ccchHHHHHhhhcCCEEEEe
Q 030694 113 TVSA---------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 136 (173)
.... ...+..+.++|+|+|+++..
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3221 12456788999999998873
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00059 Score=50.51 Aligned_cols=75 Identities=24% Similarity=0.333 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-E--eeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.+. . .|-.+.+.+.+ + .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999998 89999999999999999999999988776665433 3221 1 23334332222 2 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0017 Score=48.54 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCE--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (173)
++++++|.|+ + ++|.+.++.+...|++|++.++++. ..+.+....+... ..|-.+.+.+++. .++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 5789999997 3 7999999999999999998887632 2233332223211 2344444333322 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999999983
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0012 Score=47.05 Aligned_cols=95 Identities=24% Similarity=0.258 Sum_probs=60.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCCcchHHHHHHH---cCCCE--EeeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAVER---LGADS--FLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
++++.+|+-+|+| .|..+..+++. .+++|++++.+++..+.+++. .+.+. ++..+..+ ... .+.+|+++..
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~-~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEE-FGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhh-CCC-CCCccEEEEc
Confidence 3558999999986 34444445543 457999999999877776653 33321 22211111 111 3479999864
Q ss_pred CCCc--cchHHHHHhhhcCCEEEEeC
Q 030694 114 VSAV--HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g~~--~~~~~~~~~l~~~G~~v~~g 137 (173)
.... ..+..+.+.|+|||+++.+-
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 3322 34667889999999998874
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00044 Score=51.17 Aligned_cols=76 Identities=21% Similarity=0.311 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH-------hcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~-------~~~~ 106 (173)
-++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ...|-.+.+.+.. ..++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887766655433 221 2234344333222 1257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 9999999975
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00049 Score=45.84 Aligned_cols=89 Identities=19% Similarity=0.337 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.-+|-|+|+|.+|..+....+..|..|..+. ++.+..+.+...++...+.+ ..++....|++|-++++. .
T Consensus 8 ~~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~------~~~~~~~aDlv~iavpDd-a 80 (127)
T PF10727_consen 8 AARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILD------LEEILRDADLVFIAVPDD-A 80 (127)
T ss_dssp ----EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CC-H
T ss_pred CCccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccc------cccccccCCEEEEEechH-H
Confidence 346789999999999999999999999988875 55556666666555543432 223456899999999999 5
Q ss_pred hHHHHHhhhcC-----CEEEEe
Q 030694 120 LMPLIGLLKSQ-----GKLVLL 136 (173)
Q Consensus 120 ~~~~~~~l~~~-----G~~v~~ 136 (173)
+...+..|+.. |+++.-
T Consensus 81 I~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 81 IAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHHHHhccCCCCcEEEE
Confidence 88888888765 665544
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0015 Score=49.71 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=63.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--chHHHHHH---HcCCCE---EeeCCChHHHHHh-------c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVE---RLGADS---FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~--~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~ 104 (173)
-++++++|.|+ |++|...++.+...|++|++..++. ++.+.+.+ ..+... ..|-.+.+.+.+. .
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35689999998 9999999999999999999887543 23333332 123221 2344444332222 3
Q ss_pred CCccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 105 GTMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 105 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+++|+++.+.|... .+..++..|+.+|+++.+++..
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 47999999887420 1234445566789999887644
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0021 Score=48.76 Aligned_cols=100 Identities=15% Similarity=0.194 Sum_probs=63.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
.++++++|.|+ |++|..+++.+...|++|+++.+++++ .+...+. .+... ..|-.+.+.+.+. .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 999999999999899999999887542 2222221 23222 1233333332222 24
Q ss_pred CccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|.+.|... ....++..++++|+++.+++..
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 7999999987520 1123345566778999888644
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00049 Score=52.95 Aligned_cols=74 Identities=20% Similarity=0.247 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+. .. . ..|-.+.+.+++. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4788999998 999999999999999999999999888776655442 11 1 1244443322221 2369
Q ss_pred cEEEEcCC
Q 030694 108 DGIIDTVS 115 (173)
Q Consensus 108 d~vid~~g 115 (173)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999988
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00085 Score=49.35 Aligned_cols=75 Identities=23% Similarity=0.441 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHH----Hh---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQ----AA---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~----~~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|-.+.+... .+ .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999988776655442 23321 23333333222 22 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.+|.+.|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999884
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00056 Score=47.18 Aligned_cols=74 Identities=24% Similarity=0.381 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCC--cchHHHHHHHc---CCCE-E--eeCCChHHHHH-------hcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAVERL---GADS-F--LVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~--~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~-------~~~~ 106 (173)
++++|+|+ +++|...++.....|. +|+.+.++ .++.+.+.+.+ +... + .|-.+.+.+++ ..+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 9999999998888877 77888887 45555443323 4221 2 23333332222 2358
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999999975
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00073 Score=49.94 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-C---EEeeCCChHHHHH----h---cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D---SFLVSRDQDEMQA----A---MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~----~---~~~~d~ 109 (173)
++++++|.|+ |++|...++.+...|++|++++++++..+...+ ... . ...|-.+.+.+.+ + .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999998 999999999999999999999998765444444 322 1 1234344332222 1 247999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0013 Score=41.31 Aligned_cols=86 Identities=21% Similarity=0.363 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEE-eCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
++.++|+|.+|.+.++-....| .+|+.. .+++++.+.+.++++..... .+..+ ..+..|++|-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~----~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEE----AAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHH----HHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHH----hhccCCEEEEEECHHH-H
Confidence 5778899999999999999999 789955 99999999988867754332 11122 2336899999999884 5
Q ss_pred HHHHHhh---hcCCEEEEe
Q 030694 121 MPLIGLL---KSQGKLVLL 136 (173)
Q Consensus 121 ~~~~~~l---~~~G~~v~~ 136 (173)
...+..+ .++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 5555444 455666654
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0016 Score=50.16 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=71.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CE----EeeCCChHHHHH-------hc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DS----FLVSRDQDEMQA-------AM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~----v~~~~~~~~~~~-------~~ 104 (173)
.++.+++|.|+ +++|..+++.+...|++|++.+|+.++.+.+.+++.. .. ..|-++.+.+.. ..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 45788999999 8999999999999999999999999887777665432 21 223333322222 23
Q ss_pred CCccEEEEcCCCcc-----------------------chHHHHHhhhcC--CEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQ--GKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------~~~~~~~~l~~~--G~~v~~g~~~~ 141 (173)
.+.|+.|++.|.-. ....++..|+.. +|+|.+++..+
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 48999999988631 133555666655 79999986543
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00066 Score=52.52 Aligned_cols=91 Identities=20% Similarity=0.226 Sum_probs=67.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----------EeeCCChHHHHHhcCCccEEE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----------FLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----------v~~~~~~~~~~~~~~~~d~vi 111 (173)
..+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+ .+... +... +...+.....|++|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~---~~~~e~~~~aD~Vi 79 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPT---ADPEEALAGADFAV 79 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEe---CCHHHHHcCCCEEE
Confidence 457999999999999999988899999999999888777765 32100 1111 11223345799999
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
-|+.... +...+..++++-.++.+..
T Consensus 80 ~~v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 80 VAVPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred EECchHH-HHHHHHhcCcCCEEEEEee
Confidence 9999984 7888888888877776643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00061 Score=50.39 Aligned_cols=74 Identities=20% Similarity=0.308 Sum_probs=52.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EEe--eCCChHHHHH----h---cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SFL--VSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~----~---~~~~d 108 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ..+ |-.+.+.+++ + .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999998 89999999999999999999999887766554433 211 222 4344433322 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00082 Score=51.70 Aligned_cols=89 Identities=20% Similarity=0.317 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
..+++|.|+|.|.+|...++.++..|++|+++++..++.. +..... ....+.+...+.|+++.+++.....
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence 3678999999999999999999999999999987654321 111111 1123445566788888888864221
Q ss_pred -----HHHHHhhhcCCEEEEeCC
Q 030694 121 -----MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 -----~~~~~~l~~~G~~v~~g~ 138 (173)
...+..|+++..+|.+|-
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECCC
Confidence 246677888888877764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0017 Score=49.94 Aligned_cols=74 Identities=26% Similarity=0.279 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC--C--EE--eeCCChHHH----HHh---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA--D--SF--LVSRDQDEM----QAA---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~--~--~v--~~~~~~~~~----~~~---~~~~ 107 (173)
+++++|.|+ +++|..+++.+...| ++|+++++++++.+.+.+.++. . .. .|-.+.+.+ +++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999998 899999999888899 8999999998877766554531 1 11 344443322 222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00055 Score=50.10 Aligned_cols=92 Identities=29% Similarity=0.385 Sum_probs=63.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEEeeCCChH--HHHHhcCCccEEE-----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVSRDQD--EMQAAMGTMDGII----- 111 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~--~~~~~~~~~d~vi----- 111 (173)
+|.+||=+|+|+ |++...+|+ .|++|++++-+++-.+.++.. -|.. +||.... .+.+..+.||+|+
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 789999999952 555555555 889999999999988888752 2222 4555432 2222335899996
Q ss_pred EcCCCcc-chHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAVH-PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~~-~~~~~~~~l~~~G~~v~~g 137 (173)
+-+..+. .+..+.+.++|+|.+...-
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 4566553 3557888999999987654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0028 Score=46.91 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|++..++.+ +.+.+.. .+... ..|-.+.+.+.+. .+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 99999999999999999988765443 3444443 33222 2344444333222 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99875
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0023 Score=46.75 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE-E--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|+|+ |.+|..+++.+...|.+|+++.+++++.+.+... .+... . .|..+.+.+.+. .+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999999989999999999998775544332 23221 1 244443322221 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999876
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0019 Score=50.19 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=66.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
-.+++|+|+|+ |.+|..+++.+.. .|. +++.+.++++++..+.++++...+. .+.+...+.|+++.+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCC
Confidence 46799999999 9999999888864 465 8999999988888876655522221 2334556899999999976
Q ss_pred cchHHHHHhhhcCCEEEEeCCCC
Q 030694 118 HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..+.---..++++-.++.++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 43211123557777888888654
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0043 Score=44.34 Aligned_cols=102 Identities=15% Similarity=0.105 Sum_probs=63.0
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
.....+++++|+-+|+| .|..+..+++.. +.+|++++.+++..+.++++ ++.. .++..+..+....+...+|.
T Consensus 34 ~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~ 112 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDR 112 (196)
T ss_pred HhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCE
Confidence 33345788999999875 344555555543 46999999999888877663 3432 23333333333333334455
Q ss_pred EEEcCCC--ccchHHHHHhhhcCCEEEEeCC
Q 030694 110 IIDTVSA--VHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 110 vid~~g~--~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
++-..+. ...+..+.+.|+|||+++....
T Consensus 113 v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 113 VCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred EEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 4432232 2356788899999999887753
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00073 Score=46.68 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CC----EEeeCC--ChHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD----SFLVSR--DQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~----~v~~~~--~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|.|+|+|..|.+++..+...|.+|+.+.++++..+.+++.-. .. ..+... ..+.+++...+.|+++-+++..
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5889999999999999999999999999999988888877321 01 111110 0123344556899999999988
Q ss_pred cchHHHHHhhhc---CCEEEEe
Q 030694 118 HPLMPLIGLLKS---QGKLVLL 136 (173)
Q Consensus 118 ~~~~~~~~~l~~---~G~~v~~ 136 (173)
..+..+..+++ .+..+..
T Consensus 81 -~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 81 -AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GHHHHHHHHTTTSHTT-EEEE
T ss_pred -HHHHHHHHHhhccCCCCEEEE
Confidence 46777777766 3544444
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0018 Score=48.97 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=73.3
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
.-.||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|++..+....
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~--------------------- 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD--------------------- 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence 3468877777777887776568999999998 569999999999999999887743221
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++.++|.+..+. -..+++|..++.+|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i~--~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLIK--ADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCccccC--HHHcCCCcEEEEeccc
Confidence 1223346789999999986553 3468999999999963
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00075 Score=52.05 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=58.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----------cCCC--EEeeC-CChHHHHHhcCCccE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----------LGAD--SFLVS-RDQDEMQAAMGTMDG 109 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----------~g~~--~v~~~-~~~~~~~~~~~~~d~ 109 (173)
-++|.|+|+|.+|...++.+...|.+|++.+++++..+.+.+. .+.. ..... .....+.+...+.|+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 3689999999999999999999999999999998765544331 1100 00000 000112334468999
Q ss_pred EEEcCCCcc-----chHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAVH-----PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~~-----~~~~~~~~l~~~G~~v~~g 137 (173)
|++++.... .+..+-..++++ .++...
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~-aIlaSn 118 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPD-AIIASS 118 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCC-eEEEEC
Confidence 999999763 233333444444 454443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00082 Score=48.87 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=51.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHH----hc-CCccEEEEcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQA----AM-GTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~----~~-~~~d~vid~~g 115 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.+ ++... ..|-.+.+..++ +. +++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 57899998 999999999999999999999999887766655 43222 234344333322 22 37999999886
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 5
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0023 Score=47.09 Aligned_cols=72 Identities=19% Similarity=0.295 Sum_probs=49.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHHcC----CC----EEeeCCChHHHHH-------hcCCcc
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLG----AD----SFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~-------~~~~~d 108 (173)
++|.|+ |++|...++.+...|++|++++++ +++.+.+.+.+. .. ...|-.+.+.+++ ..+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 789998 999999999999999999999987 665555544332 11 1224444433322 235799
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
++|.+.|..
T Consensus 82 ~vi~~ag~~ 90 (251)
T PRK07069 82 VLVNNAGVG 90 (251)
T ss_pred EEEECCCcC
Confidence 999998853
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0024 Score=48.46 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC----------CEEeeCCChHHHHHhcCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----------DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----------~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+..++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. -.++..+...++....+.+|+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 4568999999863 5566666776565 899999999988888774421 123333334455443458999
Q ss_pred EEEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
||.....+ .-+..+.+.|+++|.++...
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 98654332 12457789999999988754
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00082 Score=49.21 Aligned_cols=70 Identities=23% Similarity=0.362 Sum_probs=55.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCC
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
|+|+|+ |.+|...++.+...+.+|.+..|++.+ .+.++. .|...+ .|+.+.+.+.+...++|.+|.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999999999999998743 455566 787543 3555667777778899999999994
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00075 Score=51.32 Aligned_cols=87 Identities=22% Similarity=0.252 Sum_probs=61.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (173)
+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|.|++........
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~---~~~~~~~aDivi~~vp~~~~~~~v~ 73 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-AGAVTA---ET---ARQVTEQADVIFTMVPDSPQVEEVA 73 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHHH
Confidence 3778999999999888888899999999999998888877 664321 11 223345789999999876433333
Q ss_pred ------HHhhhcCCEEEEeCC
Q 030694 124 ------IGLLKSQGKLVLLGA 138 (173)
Q Consensus 124 ------~~~l~~~G~~v~~g~ 138 (173)
+..++++-.++.++.
T Consensus 74 ~~~~~~~~~~~~g~iivd~st 94 (291)
T TIGR01505 74 FGENGIIEGAKPGKTLVDMSS 94 (291)
T ss_pred cCcchHhhcCCCCCEEEECCC
Confidence 234455556665553
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0046 Score=46.83 Aligned_cols=76 Identities=26% Similarity=0.342 Sum_probs=51.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc---------chHHHHHHHc---CCCEE---eeCCChHHHH---
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVERL---GADSF---LVSRDQDEMQ--- 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~v---~~~~~~~~~~--- 101 (173)
.++++++|.|+ +++|...++.+...|++|++++++. ++.+.+.+++ +.... .|-.+.+.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45789999998 8999999999999999999988765 4444443323 32211 2333433222
Q ss_pred -Hh---cCCccEEEEcCCC
Q 030694 102 -AA---MGTMDGIIDTVSA 116 (173)
Q Consensus 102 -~~---~~~~d~vid~~g~ 116 (173)
++ .+++|++|++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 22 3589999999885
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.001 Score=48.72 Aligned_cols=75 Identities=11% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cC-C
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MG-T 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~-~ 106 (173)
++++++|.|+ +++|+..++.+...|++|+++.+++++++.+.++. +.+. ..|-.+.+.+++ + .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 89999999999999999999999988876654432 4221 234344433322 2 24 7
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999973
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00038 Score=49.46 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=45.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc---------------CCccE
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---------------GTMDG 109 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---------------~~~d~ 109 (173)
+|.|+|.|-+|+-++..+...|.+|++++.++++.+.+++ |..++..+.-.+.+++.. ...|+
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~--g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN--GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT--TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred EEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh--ccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 6889999999999999999999999999999999888866 433333222223333221 16999
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
+|-|++.+
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 99999987
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.002 Score=48.55 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=72.9
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l--------------------- 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL--------------------- 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467877777777877776578999999998 7899999999999999998876432222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+... .+++|..++.+|..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~~~--~ik~gavVIDvGin 232 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFIDEE--YVKEGAIVIDVGTS 232 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccCHH--HcCCCcEEEEeecc
Confidence 22334579999999999755543 48999999999854
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0011 Score=48.95 Aligned_cols=72 Identities=19% Similarity=0.268 Sum_probs=53.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHH----HHh----cCCccEEEEc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEM----QAA----MGTMDGIIDT 113 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~----~~~----~~~~d~vid~ 113 (173)
++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+ .+... ..|..+.+.+ +.+ .+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 999999999999999999999999988887766 66443 2344443322 222 1468899988
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0007 Score=49.88 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ |.+|..+++.+...|++|+.+.++.++.....+.+ +.. .. .|-.+.+.+++. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999998 99999999988889999999999887666555433 221 11 233444333222 24899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
.+|.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0024 Score=46.80 Aligned_cols=75 Identities=20% Similarity=0.390 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCCE-E--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |.+|..++..+...|++|+++ .+++++.+.+.+.+ +... + .|-.+.+.+.+. .++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999998 999999999888899999998 88877665554422 2211 1 233333332222 237
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998875
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0018 Score=48.34 Aligned_cols=94 Identities=27% Similarity=0.304 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C--EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D--SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++.+||-+|+| .|..+..+++ .|.+|++++.+++..+.+++.. |. . .++..+..+......+.+|+|+...
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~-~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAE-LGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence 456799999987 4666667766 5889999999999888887643 21 1 2222222222122345799998543
Q ss_pred C-----Cc-cchHHHHHhhhcCCEEEEe
Q 030694 115 S-----AV-HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 115 g-----~~-~~~~~~~~~l~~~G~~v~~ 136 (173)
. .+ ..+..+.+.|+|||+++.+
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2 22 2467888999999998765
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0012 Score=50.27 Aligned_cols=90 Identities=22% Similarity=0.289 Sum_probs=62.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|.|++........
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~~---~~e~~~~~d~vi~~vp~~~~~~~v 75 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-AGAETA---ST---AKAVAEQCDVIITMLPNSPHVKEV 75 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CC---HHHHHhcCCEEEEeCCCHHHHHHH
Confidence 36899999999998888888899999999999888887776 664211 11 122345789999999876433333
Q ss_pred -------HHhhhcCCEEEEeCCCC
Q 030694 124 -------IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 -------~~~l~~~G~~v~~g~~~ 140 (173)
...++++-.++.++...
T Consensus 76 ~~~~~~~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 76 ALGENGIIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HcCcchHhhcCCCCcEEEECCCCC
Confidence 34455666666665433
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0012 Score=48.98 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-----EEeeCCChHHHHH----h---cCCccE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-----SFLVSRDQDEMQA----A---MGTMDG 109 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~v~~~~~~~~~~~----~---~~~~d~ 109 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+... ...|-.+.+.+.+ + .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999998 99999999999999999999999988877665534311 1234444333322 2 246899
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
++.+.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.003 Score=46.31 Aligned_cols=99 Identities=18% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~ 106 (173)
++++++|+|+ |++|...++.+...|++++.+.++.+ +.+.+.+. .+.. .. .|-.+.+.+.+. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 99999999999999999888776543 22222221 3321 11 233333322222 247
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|++|.+.|... ....+++.++++|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 999999998521 1223445566778999887543
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00086 Score=49.38 Aligned_cols=75 Identities=20% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~-------~~~~~ 107 (173)
.+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|-.+.+.+.+ ..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999998 99999999999999999999999877655544322 211 1 234344332222 22479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00088 Score=49.59 Aligned_cols=74 Identities=20% Similarity=0.337 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~~~d 108 (173)
+++++|.|+ |++|..+++.+...|++|+++++++++.+.+...+ +... ..|-.+.+.+++ + .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999998 99999999999999999999999887765554433 2221 123344433222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0029 Score=49.43 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC-------------CCEEeeCCChHHHHHhcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG-------------ADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g-------------~~~v~~~~~~~~~~~~~~~ 106 (173)
...++|||+|+| .|..+..+++..+ .+|++++.+++-.+.+++ +. .-.++..+..+++....+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 445799999976 5666666776544 499999999988888875 21 1112222334455544558
Q ss_pred ccEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|++|--...+. -+..+.+.|+|+|.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999986654431 24577889999999887653
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00087 Score=49.80 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=51.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE--EeeCCChHHHHHh-------cCCccEEE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS--FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
+++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +..+ ..|-.+.+.+++. .+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899998 89999999999999999999999988766654433 3222 2343443332222 25899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99885
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00092 Score=49.55 Aligned_cols=75 Identities=20% Similarity=0.329 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH-------hcCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA-------AMGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~-------~~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.+.+.++... ..|-.+.+.+.+ ..+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 999999999999999999999999888777666454221 123333332222 12479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0024 Score=48.32 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=72.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.++...+++|++..+... .+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence 467777777777887776678999999998 78999999999999999988643221 22
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 196 ~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 196 AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVN 232 (284)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeecc
Confidence 233446899999999986544 3447999999999854
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0012 Score=49.42 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CC-EE--eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD-SF--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~-------~~ 105 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+...+++. .. .+ .|-.+.+.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 999999999999999999999998776655443321 11 12 233333332222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0018 Score=53.48 Aligned_cols=75 Identities=23% Similarity=0.257 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
.+.+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .|.. . ..|-.+.+.+.+. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 9999999999999999999999998776655442 2321 1 2344444333222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999986
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00098 Score=49.21 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EE--eeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+.+.+++ . .+++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 99999999999999999999999877766555433 221 11 23334332222 1 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999884
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.001 Score=50.38 Aligned_cols=89 Identities=22% Similarity=0.226 Sum_probs=61.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc---hH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---LM 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~ 121 (173)
+|.|+|.|.+|...+..++..|.+|+++++++++.+.+.+ .|..... ..+ . +...+.|++|-|++.... +.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~-~g~~~~~---~~~-~-~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIE-RGLVDEA---STD-L-SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCcccc---cCC-H-hHhcCCCEEEEcCCHHHHHHHHH
Confidence 5889999999999988888889999999999988888877 6631111 111 1 124578999999997632 22
Q ss_pred HHHHhhhcCCEEEEeCCC
Q 030694 122 PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 122 ~~~~~l~~~G~~v~~g~~ 139 (173)
.....++++..++.+++.
T Consensus 76 ~l~~~l~~~~ii~d~~Sv 93 (279)
T PRK07417 76 QLIPALPPEAIVTDVGSV 93 (279)
T ss_pred HHHHhCCCCcEEEeCcch
Confidence 333444555566666643
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00063 Score=51.04 Aligned_cols=102 Identities=18% Similarity=0.063 Sum_probs=64.6
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH-h-cCCccEEEEc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA-A-MGTMDGIIDT 113 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~-~~~~d~vid~ 113 (173)
....+.++.+||-+|+| .|..+..+++..+++|++++.+++..+.+++.+....-+.....+.... . .+.+|+|+..
T Consensus 46 ~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~ 124 (263)
T PTZ00098 46 SDIELNENSKVLDIGSG-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSR 124 (263)
T ss_pred HhCCCCCCCEEEEEcCC-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEh
Confidence 33445889999999986 3445566666678899999999988888877443211011111111111 1 2369999852
Q ss_pred C-----C--C-ccchHHHHHhhhcCCEEEEeCC
Q 030694 114 V-----S--A-VHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 114 ~-----g--~-~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
- + . ...+..+.+.|+|||+++....
T Consensus 125 ~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 125 DAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred hhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 1 1 1246678899999999987754
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00081 Score=52.27 Aligned_cols=76 Identities=22% Similarity=0.341 Sum_probs=51.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------chHH----HHHHHcCCCE-E--e
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS----EAVERLGADS-F--L 92 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~---------------------~~~~----~~~~~~g~~~-v--~ 92 (173)
.+.+|+|+|+|++|..++..+...|. ++++++.+. .|.+ .+++ ++.+. + +
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~-inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK-INSEVEIVPV 101 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH-HCCCcEEEEE
Confidence 46789999999999999999999998 888888763 1222 2233 33221 1 1
Q ss_pred e-CCChHHHHHhcCCccEEEEcCCCcc
Q 030694 93 V-SRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 93 ~-~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
. ....+.+.++..++|++|||+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 1 1123445556678999999998764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0034 Score=45.40 Aligned_cols=74 Identities=14% Similarity=0.195 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHhc---CCccEEEEcCCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVSA 116 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~---~~~d~vid~~g~ 116 (173)
.++++|.|+ |.+|...++.+... ++|++++++.++.+.+.+......+ .|-.+.+.+.+.. +++|.+|.+.|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 368999998 99999998887777 9999999998776666543322222 2334444444333 379999999986
Q ss_pred c
Q 030694 117 V 117 (173)
Q Consensus 117 ~ 117 (173)
.
T Consensus 82 ~ 82 (227)
T PRK08219 82 A 82 (227)
T ss_pred C
Confidence 3
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.001 Score=48.49 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=52.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh----cCCccEEEEcCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA----MGTMDGIIDTVS 115 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~----~~~~d~vid~~g 115 (173)
+++|.|+ |++|...++.+...|++|+.+++++++.+.+.+.++... ..|-.+.+.+++. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899998 999999999999999999999999888776655455432 2344444433332 236899999865
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0013 Score=50.79 Aligned_cols=89 Identities=26% Similarity=0.341 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++-|+|.|.+|.+.++.++..|++|...+++.. .+..+.++..++ + +.++....|++.-.++...
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~------~-l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV------D-LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec------c-HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998876 333332555443 1 4445567888876666431
Q ss_pred --c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -...+..|++++.+|.++-
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCC
Confidence 1 2266788888888888764
|
|
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0015 Score=50.59 Aligned_cols=105 Identities=20% Similarity=0.189 Sum_probs=75.3
Q ss_pred HHHHHh-hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~-~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+-++.+ ...+-.|++++|.|-|-+|.-.++.++..|++|++++.++-+.-++.= -|. .|.. +.+....-|+
T Consensus 196 ~DgI~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-~V~~------m~~Aa~~gDi 267 (420)
T COG0499 196 LDGILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-RVMT------MEEAAKTGDI 267 (420)
T ss_pred HHHHHhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-EEEE------hHHhhhcCCE
Confidence 334444 344578999999999999999999999999999999998865544432 233 2322 2233335699
Q ss_pred EEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCc
Q 030694 110 IIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 110 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
++-++|+.+.+. .-+..|+.+..+...|....++
T Consensus 268 fiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI 302 (420)
T COG0499 268 FVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEI 302 (420)
T ss_pred EEEccCCcCccCHHHHHhccCCeEEecccccceec
Confidence 999999987665 5667788888888888655443
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0026 Score=48.02 Aligned_cols=95 Identities=21% Similarity=0.234 Sum_probs=73.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.++...+++|++.-+....+
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l--------------------- 196 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNL--------------------- 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467777777777777776678999999998 7899999999999999998876433222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin 233 (284)
T PRK14177 197 PSIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCc
Confidence 223346789999999986544 4568999999999964
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0032 Score=47.08 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHH-------hcCCccE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQA-------AMGTMDG 109 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~~~~d~ 109 (173)
++++|.|+ |++|+..++.+...|++|++++++.++.+.+... .+.+. ..|-.+.+.+.+ ..+++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899998 9999999999988999999999988776654432 23221 123333332222 2247999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999985
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00085 Score=51.77 Aligned_cols=75 Identities=13% Similarity=0.245 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE----EeeCCC--hHHHHHh---cC--
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS----FLVSRD--QDEMQAA---MG-- 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----v~~~~~--~~~~~~~---~~-- 105 (173)
.|++++|.|+ +++|...++.....|++|+++++++++++.+.+++ +... ..|-.+ .+..+++ .+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999998 89999999988889999999999998877665433 2111 233332 2222222 23
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
.+|+++++.|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 46699998874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0017 Score=48.62 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=53.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEEEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
+++||.|+ |.+|..+++.+...|++|+++.+++++.+.+.+..+... ..|-.+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999998 999999999999999999999999888777766444221 2344444333221 247999999
Q ss_pred cCCCc
Q 030694 113 TVSAV 117 (173)
Q Consensus 113 ~~g~~ 117 (173)
+.|..
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 98853
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.001 Score=50.61 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcCCC----EEeeCCChHHHHH--hcCCccEEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQA--AMGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~--~~~~~d~vid 112 (173)
...++|+-+|+|+.++.++.+++.+. .+++.++.+++..+.+++.+..+ .-+.....+..+. ..+++|+||.
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~ 201 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL 201 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence 37799999999999988888886654 47999999999888888754221 1111111122211 1358999987
Q ss_pred cCC------C-ccchHHHHHhhhcCCEEEEeC
Q 030694 113 TVS------A-VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g------~-~~~~~~~~~~l~~~G~~v~~g 137 (173)
.+- . ...++...+.|+|||.++.=.
T Consensus 202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred ecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 741 1 135678889999999987654
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0021 Score=47.42 Aligned_cols=101 Identities=21% Similarity=0.169 Sum_probs=72.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCEEee---CCChHHHHHhc-CCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLV---SRDQDEMQAAM-GTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~---~~~~~~~~~~~-~~~d~vi 111 (173)
..+.+|++|+-.|.| .|.+++-+++..|. +|+..+..++..+.+++++..-.+.| ....+..+... ..+|.+|
T Consensus 90 ~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~ 168 (256)
T COG2519 90 LGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVF 168 (256)
T ss_pred cCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEE
Confidence 445899999999887 57788888887765 99999999999988888654211111 11122221122 2799998
Q ss_pred EcCCCc-cchHHHHHhhhcCCEEEEeCCC
Q 030694 112 DTVSAV-HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 112 d~~g~~-~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
=-.+.| ..++.+.+.|+|||+++++...
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 777766 5688999999999999998643
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0012 Score=48.94 Aligned_cols=75 Identities=23% Similarity=0.330 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+++ + .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999887766555422 222 1234444443322 1 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.+|.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0014 Score=47.42 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=69.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-+|++|+|+|+|.+|..=+++....|++|+++.... .++..+.++.+.. .+. ..+......+++++|-+++++..
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~---~~~~~~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE---REFDAEDLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh---cccChhhhcCceEEEEeCCCHHH
Confidence 368899999999999999999999999999998766 4444444422211 111 11111122259999999999864
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
-....+..++.+.++.+...+...++......
T Consensus 86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~ 117 (210)
T COG1648 86 NERIAKAARERRILVNVVDDPELCDFIFPAIV 117 (210)
T ss_pred HHHHHHHHHHhCCceeccCCcccCceecceee
Confidence 44555666677877777644443344433333
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0013 Score=48.81 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcch-HHHHHHHc---CC-C-EE--eeCCChHH----HHHhc-
Q 030694 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSK-KSEAVERL---GA-D-SF--LVSRDQDE----MQAAM- 104 (173)
Q Consensus 40 ~~~g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~-~~~~~~~~---g~-~-~v--~~~~~~~~----~~~~~- 104 (173)
+..+++++|.|+ |++|..+++.+...| ++|+++++++++ ++.+.+++ +. . ++ .|..+.+. .+++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999998 999999999877775 899999998875 54443322 32 1 22 23333332 22222
Q ss_pred -CCccEEEEcCCCc
Q 030694 105 -GTMDGIIDTVSAV 117 (173)
Q Consensus 105 -~~~d~vid~~g~~ 117 (173)
+++|+++.+.|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 4799999888764
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0029 Score=48.38 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=61.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH--
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP-- 122 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 122 (173)
+|.++|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+...+.+.....|+++-|+... ..+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~-~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE-DRTTGV---ANLRELSQRLSAPRVVWVMVPHG-IVDAVL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCccc---CCHHHHHhhcCCCCEEEEEcCch-HHHHHH
Confidence 5889999999999888888899999999999999888887 553221 12222222234678888888876 3343
Q ss_pred --HHHhhhcCCEEEEeCCC
Q 030694 123 --LIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 123 --~~~~l~~~G~~v~~g~~ 139 (173)
+...++++-.++.++..
T Consensus 77 ~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred HHHHhhCCCCCEEEECCCC
Confidence 33444555556665543
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0031 Score=45.94 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhc------CCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAM------GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~------~~~d~vid~ 113 (173)
++++++|.|+ |++|...++.+...|++|+++.++.++ . .... ...|..+.+.+.+.. .++|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 3678999998 999999999999999999999988764 1 2211 223444443332221 268999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 885
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0019 Score=47.29 Aligned_cols=75 Identities=24% Similarity=0.352 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-E--eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-F--LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |.+|..+++.+...|+.|+...++.++++.+....+... . .|-.+.+.+.+. .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 999999999999999999988888877776655455321 1 233333332222 3579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999985
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.002 Score=49.93 Aligned_cols=94 Identities=19% Similarity=0.302 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..|.+.+..+.. .+. +|.++.++.++.+.+.+.+ |.. +....+ .++...+.|+++.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 456789999999999887776664 565 8999999999888776644 322 211222 233445789999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+....+-.. ..++++-.+..+|..
T Consensus 206 ~s~~p~i~~-~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILKA-EWLHPGLHVTAMGSD 229 (330)
T ss_pred CCCCcEecH-HHcCCCceEEeeCCC
Confidence 876322111 236777777777754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0033 Score=46.42 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCC-EE--eeCCChHHH----HHhc-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD-SF--LVSRDQDEM----QAAM----- 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~----~~~~----- 104 (173)
.+.+++|.|+ |++|..+++.+...|++|++. .+++++.+...+.+ +.. .. .|-.+.+.+ +++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999998 999999999999999988775 56666554443322 222 12 233443322 2211
Q ss_pred ----CCccEEEEcCCC
Q 030694 105 ----GTMDGIIDTVSA 116 (173)
Q Consensus 105 ----~~~d~vid~~g~ 116 (173)
+++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 369999999876
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0018 Score=49.92 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcCC-C-E--EeeCCChHHHHHhcCCccEEEEcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGA-D-S--FLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~-~-~--v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++++||.|+ |.+|..+++.+...| .+|++.++++.+...+.+.+.. . . ..|-.+.+.+.+...++|++|.+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4789999998 999999999887775 6899988876655444332321 1 1 125455666666667899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 75
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0066 Score=46.79 Aligned_cols=95 Identities=24% Similarity=0.239 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+..++++|+|+|..|...++.... .+. +|+++.+++++.+.+.+.+... .+.... ...+...+.|+|+.|++.
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~---~~~~av~~aDIVi~aT~s 199 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVT---DLEAAVRQADIISCATLS 199 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeC---CHHHHHhcCCEEEEeeCC
Confidence 678899999999999998864443 564 8999999999888777655321 121111 122334589999999987
Q ss_pred ccc-hHHHHHhhhcCCEEEEeCCCC
Q 030694 117 VHP-LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 117 ~~~-~~~~~~~l~~~G~~v~~g~~~ 140 (173)
... +. -..+++|-.+..+|...
T Consensus 200 ~~pvl~--~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 200 TEPLVR--GEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCCEec--HHHcCCCCEEEeeCCCC
Confidence 632 22 24678888777777544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0013 Score=48.64 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+. .+.. . ..|-.+.+.+.+ . .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999999989999999999988765544432 2322 1 123333332222 1 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0029 Score=48.56 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHh-cCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAA-MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~-~~~~d~ 109 (173)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. -.++..+...++++. .+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 5578999999864 5556667776554 899999988777777664431 122333333455544 347999
Q ss_pred EEEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
||--...+ .-++.+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 98654432 12567789999999997654
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0028 Score=46.31 Aligned_cols=94 Identities=24% Similarity=0.235 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
++++++||-+|+|. |..+..+++. ++ +|++++.+++..+.++++. +.. .+++.+-.+.. ..+.+|+|+...
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~~--~~~~fD~Vi~np 109 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARAV--EFRPFDVVVSNP 109 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhhc--cCCCeeEEEECC
Confidence 47889999999985 7777777764 66 9999999998777666532 322 23332211211 124799999763
Q ss_pred CCc---------------------------cchHHHHHhhhcCCEEEEeC
Q 030694 115 SAV---------------------------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~---------------------------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-. ..+..+.+.|++||+++.+-
T Consensus 110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 211 12346778999999998763
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0034 Score=47.42 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l--------------------- 193 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL--------------------- 193 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH---------------------
Confidence 467887777777877776578999999998 7889999999999999998764432212
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 194 ~~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin 230 (282)
T PRK14169 194 KQLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGIS 230 (282)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeecc
Confidence 223345789999999986544 3468999999999954
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=48.30 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+.+++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|..+.+.+.+. .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3678999998 99999999998899999999999887655543322 3221 1233333332222 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999998753
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0013 Score=48.93 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
+.+++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|..+.+.+.+. .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999998 9999999999999999999999987765544332 23221 2233333322221 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0039 Score=46.97 Aligned_cols=96 Identities=21% Similarity=0.149 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~v 110 (173)
+..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+.. -.++..+..+.+++..+.+|+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI 149 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI 149 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence 4456999999864 4445555565534 899999998877777664321 1122222234444445689999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-....+ ..++.+.+.|+++|.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 7544321 12457789999999998874
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0018 Score=49.02 Aligned_cols=90 Identities=19% Similarity=0.211 Sum_probs=68.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|..+|.|.+|.-+++-+...|..|++.++++++ .+.++. .|+...-+ ..+.....|++|-|+++.....+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~-~Ga~~a~s------~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAA-AGATVAAS------PAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHH-cCCcccCC------HHHHHHhCCEEEEecCCHHHHHHH
Confidence 5788899999999999999999999999999999 666666 78754321 123344789999999998655544
Q ss_pred H-------HhhhcCCEEEEeCCCCC
Q 030694 124 I-------GLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~~~ 141 (173)
+ ..+++|..+|.++..+.
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTisp 99 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTISP 99 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCCCH
Confidence 4 44567888888876553
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0014 Score=47.77 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-----------------eeCCChHHHHHh
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-----------------LVSRDQDEMQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-----------------~~~~~~~~~~~~ 103 (173)
.++.+||+.|+| .|.-+..++. .|++|++++.++...+.+.++.+.... ...+-.+.....
T Consensus 36 ~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 567899999987 5677777765 899999999999877766443442110 000001110111
Q ss_pred cCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEE
Q 030694 104 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 104 ~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~ 135 (173)
.+.+|.++|..--- ..+..+.+.|+|||+++.
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 23689999866421 236678899999997554
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0033 Score=47.59 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=71.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l 192 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L 192 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777777776568999999998 789999999999999999876543322 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 193 ~~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDVGin 229 (287)
T PRK14173 193 PAVTRRADVLVVAVGRPHLIT--PEMVRPGAVVVDVGIN 229 (287)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCc
Confidence 223345789999999886543 4457999999999954
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0061 Score=44.75 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCCEE---eeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGADSF---LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~----~---~~~ 106 (173)
++++++|.|+ |++|..+++.+...|++|++... ++.+.....+. .+.... .|-.+.+.+.+ + .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999998 99999999999999998887543 33332222221 343322 34444333222 1 258
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|.+.|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999999863
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0019 Score=52.00 Aligned_cols=88 Identities=25% Similarity=0.334 Sum_probs=59.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---ch
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PL 120 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~ 120 (173)
+|.|+|+ |.+|.+.+..++..|.+|+++++++++......++|.... .+ ..+.....|++|-|++... .+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~~---~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---ND---NIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---cC---HHHHhccCCEEEEecCHHHHHHHH
Confidence 6889985 9999999999999999999999988775444333675211 11 1223457899998888652 12
Q ss_pred HHHHHhhhcCCEEEEeCC
Q 030694 121 MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~ 138 (173)
......++++..++.+++
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 233344566777777775
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0017 Score=47.43 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHH----HHh---cCCccEEEEc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEM----QAA---MGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~----~~~---~~~~d~vid~ 113 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.....+..+... ..|..+.+.+ +++ .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999998 899999999999999999999988764332222245321 2333333322 222 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 885
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0029 Score=46.77 Aligned_cols=70 Identities=24% Similarity=0.298 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-EEeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-SFLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++ .. .+. . ...|..+.+.+++. .+++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 999999999999999999999998754 11 221 1 12344443332222 2478999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0038 Score=47.16 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=72.5
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n---------------------l 194 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L 194 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467877777777877776578999999998 788999999999999999876543322 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvIsAvGkp~~i~~--~~vk~GavVIDvGin 231 (282)
T PRK14166 195 SLYTRQADLIIVAAGCVNLLRS--DMVKEGVIVVDVGIN 231 (282)
T ss_pred HHHHhhCCEEEEcCCCcCccCH--HHcCCCCEEEEeccc
Confidence 2233467899999999865543 458999999999953
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0013 Score=47.79 Aligned_cols=78 Identities=18% Similarity=0.287 Sum_probs=50.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc------------------chHHHHHHH---cCCC-EE--eeC-C
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEAVER---LGAD-SF--LVS-R 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~------------------~~~~~~~~~---~g~~-~v--~~~-~ 95 (173)
...+|+|+|+|++|..+++.+.+.|. ++++++.+. .|.+.+.+. ++.. .+ ++. -
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 46789999999999999999999999 799988772 122222221 2221 11 111 1
Q ss_pred ChHHHHHhcCCccEEEEcCCCccc
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+...+...++|+||||+.+...
T Consensus 107 ~~~~~~~~~~~~DvVI~a~D~~~~ 130 (212)
T PRK08644 107 DEDNIEELFKDCDIVVEAFDNAET 130 (212)
T ss_pred CHHHHHHHHcCCCEEEECCCCHHH
Confidence 123333455689999999887743
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0016 Score=48.22 Aligned_cols=76 Identities=24% Similarity=0.302 Sum_probs=53.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
-++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.++ .+.. . ..|..+.+.+.+ + .++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35889999998 9999999998888999999999988766554432 2321 1 224344332222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.+|.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999885
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0015 Score=47.83 Aligned_cols=76 Identities=13% Similarity=0.226 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
..+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|-.+.+.+.. + .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35678999998 99999999999999999999999887766554422 211 1 223333332222 1 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00097 Score=47.84 Aligned_cols=93 Identities=18% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHH-HhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQ-AAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~-~~~~~~d~vid~~g~ 116 (173)
.++.+||-+|+| .|..+..+++ .|++|++++.+++-.+.+++.. +...+ +....+... ...+.+|+|+....-
T Consensus 29 ~~~~~vLDiGcG-~G~~a~~La~-~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~fD~I~~~~~~ 105 (197)
T PRK11207 29 VKPGKTLDLGCG-NGRNSLYLAA-NGFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLTFDGEYDFILSTVVL 105 (197)
T ss_pred CCCCcEEEECCC-CCHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCCcCCCcCEEEEecch
Confidence 567899999987 3666677776 4889999999988666665522 22111 111111111 123479999876442
Q ss_pred --------ccchHHHHHhhhcCCEEEEe
Q 030694 117 --------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 117 --------~~~~~~~~~~l~~~G~~v~~ 136 (173)
...+..+.+.|+|||.++.+
T Consensus 106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 106 MFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 12456777889999996543
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0018 Score=47.67 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHcCCC-E--EeeCCChHHHH----Hh---cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGAD-S--FLVSRDQDEMQ----AA---MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~~-~--v~~~~~~~~~~----~~---~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++.. .+.+.+ .+.. . ..|-.+.+.+. ++ .+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 899999999999999999999986521 122222 4432 1 22333433222 22 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999885
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0077 Score=42.76 Aligned_cols=98 Identities=20% Similarity=0.188 Sum_probs=58.5
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHH---H-h-cCCc
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQ---A-A-MGTM 107 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~---~-~-~~~~ 107 (173)
+....++++++||.+|+|+-++......+..+ .+|++++.++.+ ...+...+ .|..+.+... + . .+++
T Consensus 25 ~~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 25 QKFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKV 99 (188)
T ss_pred HHhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCc
Confidence 34556689999999999755543333333323 489999998764 11233222 2332222221 1 2 2379
Q ss_pred cEEEEcC-----CC------------ccchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTV-----SA------------VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 137 (173)
|+++... |. ...+..+.++|+|+|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999532 22 124667889999999998865
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0016 Score=47.89 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |.+|...++.+...|++|++++++.++...+... .+.. .+ .|-.+.+.+.+. .+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999999999999999987655444332 2321 11 233343333222 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|.+|.+.|..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999998763
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0063 Score=45.21 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-++++++|.|+ |++|...++.+...|++|+++.++.. +...+.+. .+... ..|-.+.+.+.+. .+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 99999999999999999888877543 33322221 23221 2344444333222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|+++.+.|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0031 Score=45.65 Aligned_cols=98 Identities=28% Similarity=0.213 Sum_probs=62.1
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vi 111 (173)
....+++++||-+|+| .|..+..+++.. .+|+.++.+++..+.+++.+ +.. .++..+..+.. ...+.+|+++
T Consensus 73 ~l~~~~~~~VLeiG~G-sG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~ 149 (212)
T PRK00312 73 LLELKPGDRVLEIGTG-SGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW-PAYAPFDRIL 149 (212)
T ss_pred hcCCCCCCEEEEECCC-ccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC-CcCCCcCEEE
Confidence 3445789999999986 344445555543 48999999988777776643 322 12222111110 0124799998
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.............+.|++||+++..-
T Consensus 150 ~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 150 VTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred EccCchhhhHHHHHhcCCCcEEEEEE
Confidence 76655555667889999999987653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=50.04 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEE--eeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSF--LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v--~~~~~~~~~~~~~~~~d~vid 112 (173)
.++++||.|+ |.+|..+++.+...|++|+++.++.++........ +. -.. .|-.+.+.+.+...++|++|.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4789999998 99999999999999999998888766543332211 11 112 244445555555668999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.+.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9984
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0017 Score=48.73 Aligned_cols=75 Identities=21% Similarity=0.327 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|+..++.+...|++|+++++++++.+.+.+.+ +... ..|..+.+.+.. + .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999877665554432 3221 223333332222 1 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999883
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.004 Score=47.37 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=71.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|++.-+....+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l--------------------- 195 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL--------------------- 195 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 457776777777777766568999999998 7889999999999999998875432222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin 232 (297)
T PRK14186 196 ASITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIH 232 (297)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 223345789999999886444 3458899999999854
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0039 Score=47.43 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=73.2
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~n--------------------- 203 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPD--------------------- 203 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3567887777777887776578999999998 688999999999999999987543221
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 204 l~~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin 241 (299)
T PLN02516 204 PESIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN 241 (299)
T ss_pred HHHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence 2223446799999999886544 3458999999999954
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0035 Score=51.00 Aligned_cols=71 Identities=24% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-h----HHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-K----KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|++|+.++..++..|++|++++.++. . .+.+++ .|......... . ...++|+++-+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~~~-~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGPGP-T----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECCCc-c----ccCCCCEEEECCC
Confidence 4578999999999999999999999999999986543 1 223334 56543332211 1 2346899998888
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
.+
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 75
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.002 Score=45.06 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~~~ 107 (173)
+++.++|.|+ +++|...+..+...|++|+++++++++.+...+++ +... ..|..+.+..++ ..+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 89999999998889999999998877654443323 4221 233333332222 12579
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+++++.|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999998864
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0017 Score=47.71 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=51.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+...+ +.. . ..|..+.+.+.+ + .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999998 99999999988889999999999988776654422 211 1 124444432222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999874
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0043 Score=46.87 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=73.5
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl-------------------- 195 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL-------------------- 195 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH--------------------
Confidence 4578887777888888776578999999998 7889999999999999998875432211
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 196 -~~~~k~ADIvIsAvGkp~~i~~--~~vk~gavVIDvGin 232 (282)
T PRK14180 196 -KSHTTKADILIVAVGKPNFITA--DMVKEGAVVIDVGIN 232 (282)
T ss_pred -HHHhhhcCEEEEccCCcCcCCH--HHcCCCcEEEEeccc
Confidence 1223467999999999965443 568999999999954
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0022 Score=49.73 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|.+|.|+|.|.+|..+++.++..|++|++.++++++.... .. . ...+.+.....|+++.+++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~--~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----Y--KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----c--cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 57899999999999999999999999999999876532211 00 0 01233445578888888876521
Q ss_pred ---hHHHHHhhhcCCEEEEeCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (173)
....+..|+++..+|.++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 2255567777777777763
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0034 Score=50.25 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=63.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-----------cCCccEEEE
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-----------MGTMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----------~~~~d~vid 112 (173)
.+|.|+|.|.+|+.++..+...|.+|+++++++++.+.++. |...+..+.-.+.+.+. ..+.|++|-
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~--g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii 81 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR--GEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLI 81 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHC--CCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEE
Confidence 57999999999999999988899999999999998887543 43222221112222111 126899999
Q ss_pred cCCCc---------cch----HHHHHhhhcCCEEEEeCCCC
Q 030694 113 TVSAV---------HPL----MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 113 ~~g~~---------~~~----~~~~~~l~~~G~~v~~g~~~ 140 (173)
|++.+ ..+ +.+...++++..++..+..+
T Consensus 82 ~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 82 AVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred EcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 99985 122 33445566666666665433
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0042 Score=46.93 Aligned_cols=95 Identities=12% Similarity=0.157 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l 194 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD---------------------L 194 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467887777777777776578999999998 788999999999999998876543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin 231 (284)
T PRK14170 195 PQVAKEADILVVATGLAKFVK--KDYIKPGAIVIDVGMD 231 (284)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCc
Confidence 233446789999999986544 3458899999999954
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0033 Score=45.80 Aligned_cols=113 Identities=22% Similarity=0.343 Sum_probs=74.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CCE-EeeCCC---h----HHHHHh---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADS-FLVSRD---Q----DEMQAA---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-v~~~~~---~----~~~~~~---~~ 105 (173)
.|+++++.|+ |++|+.....+...|+++.++.-+.|+.+...+ +- ... ++-.-+ . ..++++ .+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3899999987 999999999999999999888887776555544 33 222 211111 1 122222 35
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhh-----cCCEEEEeCCCCCCcccCccccccCcc
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+|+.|+..|.-. ....++..+. +||.++..++..|-.+.+..+.+....
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsK 154 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASK 154 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcc
Confidence 8999999888641 2234444442 678999999887766666666665444
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0025 Score=48.67 Aligned_cols=90 Identities=14% Similarity=0.203 Sum_probs=62.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.++|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|-|+.....+...
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~-~g~~~~---~s---~~~~~~~aDvVi~~vp~~~~~~~v 74 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVD-KGATPA---AS---PAQAAAGAEFVITMLPNGDLVRSV 74 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-cCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHH
Confidence 36889999999999988888899999999999999888877 564321 11 122344789999999887433433
Q ss_pred H-------HhhhcCCEEEEeCCCC
Q 030694 124 I-------GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~~ 140 (173)
+ ..++++-.++.++...
T Consensus 75 l~~~~~i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 75 LFGENGVCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HcCcccHhhcCCCCCEEEECCCCC
Confidence 2 2345555666665433
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0012 Score=55.90 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCC--h
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRD--Q 97 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~ 97 (173)
..+++|+|+|+|+.|+.++..++..|++|+++++.+. +.+.+++ +|.+...+... .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCc
Confidence 3588999999999999999999999999999987643 2344444 67543322211 1
Q ss_pred HHHHHhcCCccEEEEcCCCc
Q 030694 98 DEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 98 ~~~~~~~~~~d~vid~~g~~ 117 (173)
-.+.++..++|.+|.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 11222334799999999864
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0055 Score=45.42 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=48.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCC-EE--eeCCChHHH----HHh---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGAD-SF--LVSRDQDEM----QAA---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~-~v--~~~~~~~~~----~~~---~~~~ 107 (173)
+++++|.|+ |++|..+++.+...|++|+++.+ +.++.+.+.+. .+.. +. .|-.+.+.+ +++ .+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999998 89999999999999999988865 43333333221 3432 22 344443322 222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0019 Score=47.92 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=51.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~ 106 (173)
..+++++|.|+ |++|...++.+...|++|+++.++ ++.+.+.+. .+.. ...|-.+.+.+.+. .++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 999999999999999999999887 443333332 3322 12343443332222 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999885
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0025 Score=46.65 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C---EEeeCCC--hH----HHHHh---c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D---SFLVSRD--QD----EMQAA---M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~v~~~~~--~~----~~~~~---~ 104 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. + ...|..+ .+ ..+++ .
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4689999998 99999999999999999999999988766654433 21 1 1123221 11 11112 2
Q ss_pred -CCccEEEEcCCC
Q 030694 105 -GTMDGIIDTVSA 116 (173)
Q Consensus 105 -~~~d~vid~~g~ 116 (173)
+.+|++|.+.|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 578999999984
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0044 Score=47.04 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=72.3
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+....+
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l-------------------- 197 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDL-------------------- 197 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCH--------------------
Confidence 3467777777777877776678999999998 7889999999999999999876543222
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 198 -~~~~~~ADIvVsAvGkp~~i~~--~~ik~gaiVIDVGin 234 (294)
T PRK14187 198 -ADYCSKADILVAAVGIPNFVKY--SWIKKGAIVIDVGIN 234 (294)
T ss_pred -HHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEeccc
Confidence 2233467899999998865443 447899999999853
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0045 Score=46.89 Aligned_cols=95 Identities=12% Similarity=0.226 Sum_probs=71.6
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~---------------------L 196 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHN---------------------L 196 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777887776678999999998 788999999999999998876543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin 233 (288)
T PRK14171 197 SSITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN 233 (288)
T ss_pred HHHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence 223346789999999886444 3458899999999943
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0022 Score=49.91 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CC-EEeeCCChHHHHHhcC--CccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----AD-SFLVSRDQDEMQAAMG--TMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~--~~d~vid~ 113 (173)
+++++||.|+ |.+|..+++.+...|.+|+++++++.........++ .. ...|-.+.+.+.+... ++|++|.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4789999998 999999999999999999999987665433322122 11 1224344444444443 68999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.+.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 984
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0027 Score=44.71 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=55.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc------------------chHHHHHHH---cCC-CEEe--eCC-ChH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEAVER---LGA-DSFL--VSR-DQD 98 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~------------------~~~~~~~~~---~g~-~~v~--~~~-~~~ 98 (173)
+|+|+|+|++|...++.+.+.|. +++.++.+. .|.+.+++. +.. ..+. +.. +.+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 48999999999999999999999 799998775 122222221 221 1221 111 122
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcC-CEEEEeC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLG 137 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g 137 (173)
...+...++|++|+|+.+...-....+.+.+. +.-...+
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 33445568999999988875333344444333 5433343
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0023 Score=49.19 Aligned_cols=35 Identities=43% Similarity=0.654 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.|+++.|+|.|.+|...++.++..|++|++.++..
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCc
Confidence 68999999999999999999999999999998753
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0044 Score=45.71 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-----cCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-----MGT 106 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-----~~~ 106 (173)
..+.++||-+|.| +|..+..+++.. +.+|+.++.+++..+.+++.+ |.. .++..+..+.+.++ .+.
T Consensus 66 ~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~ 144 (234)
T PLN02781 66 IMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPE 144 (234)
T ss_pred HhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCC
Confidence 3567899999974 455555566654 349999999999888887743 321 23333334444443 247
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
||.+|--...+ ..++.+++++++||.++.-.
T Consensus 145 fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 145 FDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 99998544322 34678889999999988543
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0047 Score=46.62 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
.+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~n---------------------l 194 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTAD---------------------L 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 468887777777887776678999999998 788999999999999988886443221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvI~AvGk~~~i~~--~~ik~gaiVIDvGin 231 (282)
T PRK14182 195 AGEVGRADILVAAIGKAELVKG--AWVKEGAVVIDVGMN 231 (282)
T ss_pred HHHHhhCCEEEEecCCcCccCH--HHcCCCCEEEEeece
Confidence 2233467999999998865443 458899999999954
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0036 Score=47.97 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=34.1
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHH
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV 83 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~ 83 (173)
-.|++++|.|+ .++|.+.++.+...|++|++ .++.++++.+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~ 51 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFE 51 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHH
Confidence 35899999998 79999999999999999988 66655554443
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0031 Score=49.82 Aligned_cols=77 Identities=23% Similarity=0.376 Sum_probs=53.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-------------------cchHHHHHHHc---CC-CEEeeCC--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAVERL---GA-DSFLVSR-- 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~-------------------~~~~~~~~~~~---g~-~~v~~~~-- 95 (173)
.+.+|+|+|+|++|..++..+...|. ++++++.+ ..|.+.+.+.+ .. ..+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 56789999999999999999999999 89999887 33444443333 22 2221111
Q ss_pred -ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 -~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+.+...++..++|+|++|+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12334445568999999999874
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0045 Score=46.69 Aligned_cols=95 Identities=19% Similarity=0.229 Sum_probs=71.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~---------------------l 194 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD---------------------L 194 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC---------------------H
Confidence 467777777777777776578999999998 588999999999999988865332211 1
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvV~AvGkp~~i~--~~~vk~gavvIDvGin 231 (281)
T PRK14183 195 KAHTKKADIVIVGVGKPNLIT--EDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHHhhCCEEEEecCcccccC--HHHcCCCcEEEEeecc
Confidence 223446899999999986544 3458899999999953
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0032 Score=48.43 Aligned_cols=88 Identities=19% Similarity=0.208 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
-.+++|.|+|.|.+|...++.++..|.+|++..+.....+.+.. .|.. +. .+.+.....|+++-+++.+..
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence 46899999999999999999999999999998776544445544 5653 21 234556689999999987532
Q ss_pred --h-HHHHHhhhcCCEEEEe
Q 030694 120 --L-MPLIGLLKSQGKLVLL 136 (173)
Q Consensus 120 --~-~~~~~~l~~~G~~v~~ 136 (173)
+ ...+..|+++..+++.
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 2456777887766554
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0026 Score=49.53 Aligned_cols=95 Identities=23% Similarity=0.298 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C--EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D--SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+++++||-+|+| .|..+..+++..|++|++++.+++..+.+++.. |. + .++..+..+ .....+.+|+|+...
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~-~~~~~~~FD~V~s~~ 194 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALN-QPFEDGQFDLVWSME 194 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCccc-CCCCCCCccEEEECC
Confidence 678899999987 466667778877999999999988777666522 21 1 121111111 101124799998644
Q ss_pred CCc------cchHHHHHhhhcCCEEEEeC
Q 030694 115 SAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
... ..+..+.+.|+|||+++...
T Consensus 195 ~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 195 SGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred chhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 322 24567889999999998764
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0043 Score=46.22 Aligned_cols=96 Identities=22% Similarity=0.180 Sum_probs=65.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.++++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+....++..+..++. ....+|+++....-.
T Consensus 28 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 104 (258)
T PRK01683 28 PLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ--PPQALDLIFANASLQ 104 (258)
T ss_pred CCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC--CCCCccEEEEccChh
Confidence 34778999999986 456666777765 46999999999988888775443333332221111 123799998654431
Q ss_pred ------cchHHHHHhhhcCCEEEEeC
Q 030694 118 ------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ------~~~~~~~~~l~~~G~~v~~g 137 (173)
..+..+.+.|+|||+++...
T Consensus 105 ~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 105 WLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 24668889999999988763
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0033 Score=42.19 Aligned_cols=95 Identities=23% Similarity=0.361 Sum_probs=57.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc-------------------hHHHHHHH---cC-CCEEe--eCC-
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAVER---LG-ADSFL--VSR- 95 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~~~---~g-~~~v~--~~~- 95 (173)
..+|+|+|+|++|..++..+...|. ++++++.+.- |.+.+++. +. ...+. +..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999999999 8888876521 22222221 22 11221 111
Q ss_pred ChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCE-EEEeC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLLG 137 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~g 137 (173)
..+...+...++|++|+|+........+.+..+..+. ++..+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 1334444456899999999987533344444455554 44443
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0021 Score=47.87 Aligned_cols=75 Identities=17% Similarity=0.279 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ +++|...+..+...|++|+++.+++++.+.+.+.+ +... ..|-.+.+.+.+. .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999998 89999999988899999999999887766554433 3221 2343443322221 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999986
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.011 Score=43.54 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHH----HHHHcCCC-EE--eeCCChHHHHH-------hcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSE----AVERLGAD-SF--LVSRDQDEMQA-------AMG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~----~~~~~g~~-~v--~~~~~~~~~~~-------~~~ 105 (173)
.+++++|.|+ |.+|...++.+...|++|+...++. ++... +++ .+.. .. .|..+.+.+.. ..+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3689999998 9999999998889999988776532 22222 222 3322 11 33333332222 124
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++|++|.+.|... ..+.+++.+++.|+++.+++..+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 7999999998410 12244556667789999886543
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0027 Score=48.32 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=60.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeC--CChHHHHHhcCCccEEEEcCCCccc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVS--RDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~--~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
+|.|+|+|.+|...+..+...|.+|+.+++++++.+.+++ .|... -... ...+...+. +.+|++|-|+....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 5899999999999888888889999999998887777776 45321 0000 001112223 68999999999773
Q ss_pred hHHHHHhhhc----CCEEEEeC
Q 030694 120 LMPLIGLLKS----QGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~----~G~~v~~g 137 (173)
+..++..+++ +..++.+.
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEec
Confidence 5666655553 44666554
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0031 Score=45.98 Aligned_cols=100 Identities=25% Similarity=0.316 Sum_probs=64.9
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~ 109 (173)
....+.++++||.+|+|. |..+..+++..+ .++++++.+++..+.+++.. +. ..+...+..+ .....+.+|+
T Consensus 13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~ 90 (241)
T PRK08317 13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG-LPFPDGSFDA 90 (241)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc-CCCCCCCceE
Confidence 334458899999999974 777778887763 58999999998888887741 11 1121111111 0011247898
Q ss_pred EEEcCC-----Cc-cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVS-----AV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g-----~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
++.... .+ ..+..+.++|+++|.++...
T Consensus 91 v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 91 VRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 875432 21 25678889999999998765
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0032 Score=46.60 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=52.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC---EEeeCCChHHHHHh-------cCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
-++++++|+|+ |++|..+++.+...|++|+++++++++.+...+ ..+.. ...|-.+.+.+... .+++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 35789999998 899999999999999999999988876533332 12322 12333333322221 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0028 Score=52.24 Aligned_cols=90 Identities=26% Similarity=0.325 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.++... .+...+ +|...+ +.++++....|+++-+++...
T Consensus 137 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~-~g~~~~------~~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYIS-PERAEQ-LGVELV------DDLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHh-cCCEEc------CCHHHHHhhCCEEEEccCCChhhc
Confidence 578999999999999999999999999999987532 223333 554221 123445567889988887542
Q ss_pred -ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 209 ~li~~~~l~~mk~ga~lIN~aRG 231 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCARG 231 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcCCC
Confidence 12 3567788888888877643
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0053 Score=46.38 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-----cCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-----MGT 106 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-----~~~ 106 (173)
..+.++||-+|.+ +|..++.+++.. +.+|+.++.+++..+.+++.+ |.. .++.....+.+.++ .+.
T Consensus 116 ~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~ 194 (278)
T PLN02476 116 ILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS 194 (278)
T ss_pred hcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence 3568899999974 455555666655 347999999999888887754 432 23334444555544 247
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
||.+|--.... ..++.+++.|++||.++.=.
T Consensus 195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 99997554432 34678899999999988554
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0085 Score=46.61 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=63.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH--HHHHHcC---CC-EEe--eCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS--EAVERLG---AD-SFL--VSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~--~~~~~~g---~~-~v~--~~~~~~~~~~~~~~~d~vi 111 (173)
.++++++|.|+ |.+|..+++.+...|.+|++++++.++.. .+.. +. .. .++ |-.+.+.+.+...++|++|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRE-LEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHH-hhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 45789999998 99999999999999999999998765422 1222 21 11 122 3334455555566899999
Q ss_pred EcCCCcc------------chHHHHHhhhcCC--EEEEeCC
Q 030694 112 DTVSAVH------------PLMPLIGLLKSQG--KLVLLGA 138 (173)
Q Consensus 112 d~~g~~~------------~~~~~~~~l~~~G--~~v~~g~ 138 (173)
.+.+... ....+++.+++.| +++.+++
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 9987531 1123444444443 7887765
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0047 Score=47.78 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=72.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+....+
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl--------------------- 251 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDP--------------------- 251 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCH---------------------
Confidence 467777777777777776578999999998 7889999999999999988765432211
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 252 ~~~~~~ADIvIsAvGkp~~v~--~d~vk~GavVIDVGin 288 (345)
T PLN02897 252 EQITRKADIVIAAAGIPNLVR--GSWLKPGAVVIDVGTT 288 (345)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 223446899999999996544 3458999999999954
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0027 Score=48.73 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C-EE--eeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SF--LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v--~~~~~~~~~~~~~~~~d~vid 112 (173)
.+++|+|.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+.. +. . .+ .|-.+.+.+.+...++|++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4789999998 99999999998889999999888776544333211 11 1 12 233334445555568999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.+.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 9874
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0065 Score=43.32 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=77.2
Q ss_pred cchhhHHHHHHHHHHhhCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE
Q 030694 21 APLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS 90 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~---------~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~ 90 (173)
.-+||+....+..+..+.. --.|++++|+|. ..+|.=++.++...|++|++...+.-.. ... .+.
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~-~~~-- 105 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTR-GES-- 105 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccc-ccc--
Confidence 3467887777777776643 367999999998 6889999999999999999886543211 111 110
Q ss_pred EeeCC-----C-hHHHHHhcCCccEEEEcCCCccc-hHHHHHhhhcCCEEEEeCCC
Q 030694 91 FLVSR-----D-QDEMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 91 v~~~~-----~-~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~ 139 (173)
...+ + .+.+.+.....|+++-++|.+.. +. -..+++|..++.+|..
T Consensus 106 -~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~--~d~ik~GavVIDVGi~ 158 (197)
T cd01079 106 -IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVP--TELLKDGAICINFASI 158 (197)
T ss_pred -cccccccccchhhHHHHHhhhCCEEEEccCCCCCccC--HHHcCCCcEEEEcCCC
Confidence 0111 1 12244566789999999999964 34 4558999999999954
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0037 Score=51.52 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=65.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.++...+ +.... .|.... .+.++....|+++-+++...
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~-~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERAAQ-LGVELV-------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHh-cCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999985432 22333 554322 13345567899998888642
Q ss_pred -ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aRG 232 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCARG 232 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCCC
Confidence 22 3677888888888888643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0027 Score=46.75 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHH-------HHHhcCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDE-------MQAAMGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~-------~~~~~~~~d 108 (173)
++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+. +.+..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999998 99999999999899999999999887766655422 2221 124444432 222235799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988875
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0036 Score=50.46 Aligned_cols=71 Identities=25% Similarity=0.345 Sum_probs=50.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hH----HHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KK----SEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+++++|+|+|.+|+.+++.+...|++|+++++++. .. +.+.+ .|.. ++-....+ +..+++|+++.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 478999999988999999999999999999998752 22 22322 4543 22222222 334579999999986
Q ss_pred c
Q 030694 117 V 117 (173)
Q Consensus 117 ~ 117 (173)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
|
|
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.003 Score=51.15 Aligned_cols=107 Identities=9% Similarity=0.001 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+++|||+|+|.++..=++.....|++|+++...-. ++..+.+ -|.-..+.. ++......++++||-|++++..
T Consensus 10 l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~~---~~~~~dl~~~~lv~~at~d~~~ 85 (457)
T PRK10637 10 LRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVEG---PFDESLLDTCWLAIAATDDDAV 85 (457)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEeC---CCChHHhCCCEEEEECCCCHHH
Confidence 4689999999999998878888889999999876532 3333333 333222221 1222234588999999999864
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
-.+.....+..|.++.+...+....+-...+.
T Consensus 86 n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~ 117 (457)
T PRK10637 86 NQRVSEAAEARRIFCNVVDAPKAASFIMPSII 117 (457)
T ss_pred hHHHHHHHHHcCcEEEECCCcccCeEEEeeEE
Confidence 44555555667887777644433333333333
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0037 Score=45.91 Aligned_cols=99 Identities=18% Similarity=0.311 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc------h-HHHHHHHcCCCE---------EeeCCC--------
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS------K-KSEAVERLGADS---------FLVSRD-------- 96 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~------~-~~~~~~~~g~~~---------v~~~~~-------- 96 (173)
+..+|+|+|.|++|.+++..+.+.|+ +++.++.++- | ...+....|... -+|+..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 45889999999999999999999998 8888875432 1 111211123110 122221
Q ss_pred --hHHHHHhcC-CccEEEEcCCCccc-hHHHHHhhhcCCEEEEeCCCC
Q 030694 97 --QDEMQAAMG-TMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 97 --~~~~~~~~~-~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+.++.. ++|+++||.-.-.. ...+..|.+.+=.++.++...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 234444443 89999999987632 223334666666777776444
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0028 Score=47.05 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
.++.+||-+|+|. |..+..++ ..|.+|++++.+++.++.+++.......+..+..+ .....+.+|+|+....-.
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~-~~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWR-ERGSQVTALDLSPPMLAQARQKDAADHYLAGDIES-LPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHH-HcCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc-CcCCCCcEEEEEECchhhhcC
Confidence 4678899999874 55554444 46889999999999888888743322222221111 111123699998654321
Q ss_pred ---cchHHHHHhhhcCCEEEEeCCC
Q 030694 118 ---HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 118 ---~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
..+..+.+.|+|||.++.....
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~ 142 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLV 142 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2467888999999999877543
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0049 Score=50.23 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
..+++++|+|+|++|.+++..+...|+++++..+++++.+.+.+.++.. .++.. .... ...+|++++|++...
T Consensus 330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---~~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---SLPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---Hhcc-cCCCCEEEEcCCCCC
Confidence 4678999999999999999999999999999999888877766645432 22211 1111 247999999998763
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0051 Score=47.85 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~n---------------------l 268 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------P 268 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCC---------------------H
Confidence 467777777777777776568999999998 788999999999999999887543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 269 ~~~~r~ADIVIsAvGkp~~i~--~d~vK~GAvVIDVGIn 305 (364)
T PLN02616 269 EEITREADIIISAVGQPNMVR--GSWIKPGAVVIDVGIN 305 (364)
T ss_pred HHHHhhCCEEEEcCCCcCcCC--HHHcCCCCEEEecccc
Confidence 223446899999999986544 3458999999999953
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0026 Score=48.93 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=60.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe------e--CCChHHHHHhcCCccEEEEcCCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL------V--SRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~------~--~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+|.|+|+|.+|...+..+...|.+|+++++++++.+.+++ .+..... . ........+...+.|++|-|+..
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINA-DRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPS 81 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCH
Confidence 6899999999999999988899999999999888887776 3311000 0 00011122334578999999998
Q ss_pred ccchHHHHHhh----hcCCEEEEeC
Q 030694 117 VHPLMPLIGLL----KSQGKLVLLG 137 (173)
Q Consensus 117 ~~~~~~~~~~l----~~~G~~v~~g 137 (173)
. .+...+..+ .++..++.+.
T Consensus 82 ~-~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 82 Q-ALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred H-HHHHHHHHHHhhcCCCCEEEEEe
Confidence 6 355554444 4455566663
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0062 Score=46.56 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=61.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (173)
+|.++|.|.+|...++-+...|.+|++.++++++.+.+.+ .|... ..+....-+.....|++|-|++....+...
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~---~~s~~~~~~~~~~advVi~~vp~~~~~~~v~ 77 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK-LGITA---RHSLEELVSKLEAPRTIWVMVPAGEVTESVI 77 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee---cCCHHHHHHhCCCCCEEEEEecCchHHHHHH
Confidence 5788999999999888888899999999999988888876 66431 112221111112368888888876333333
Q ss_pred ---HHhhhcCCEEEEeCCCC
Q 030694 124 ---IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ---~~~l~~~G~~v~~g~~~ 140 (173)
...++++..++.++...
T Consensus 78 ~~i~~~l~~g~ivid~st~~ 97 (299)
T PRK12490 78 KDLYPLLSPGDIVVDGGNSR 97 (299)
T ss_pred HHHhccCCCCCEEEECCCCC
Confidence 33455666777776443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.012 Score=43.04 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE-Ee--eCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS-FL--VSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~-v~--~~~~~~~~~~----~---~~~ 106 (173)
.+++++|.|+ |.+|...++.+...|++|+++.++..+ .+...+. .+... .+ |-.+.+.+.+ + .++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 999999999999999999888776543 2222221 23221 22 4444333222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.+|.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999885
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0089 Score=44.00 Aligned_cols=70 Identities=19% Similarity=0.229 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |.+|...++.+...|++|++++++. ... .+.. . ..|-.+.+.+++. .+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999998 8999999999999999999999876 122 2321 1 1233333333222 2469999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
|.+.|..
T Consensus 81 i~~ag~~ 87 (252)
T PRK08220 81 VNAAGIL 87 (252)
T ss_pred EECCCcC
Confidence 9998863
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0056 Score=53.99 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCC-Ce-------------EEEEeCCcchHHHHHHHc-CCC-EEeeCCChHHHHHhcC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMG-VK-------------VTVISTSPSKKSEAVERL-GAD-SFLVSRDQDEMQAAMG 105 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g-~~-------------v~~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~ 105 (173)
..++|+|+|+|.+|...++.+.... +. |++.+.+.++.+.+.+.+ +.. ..+|..+.+.+.+...
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 4678999999999999888886543 34 777888877777766645 322 3455667666666666
Q ss_pred CccEEEEcCCCccchHHHHHhhhcCC
Q 030694 106 TMDGIIDTVSAVHPLMPLIGLLKSQG 131 (173)
Q Consensus 106 ~~d~vid~~g~~~~~~~~~~~l~~~G 131 (173)
++|+|+.|++...+...+..|++.|-
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGk 673 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKK 673 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCC
Confidence 79999999998754444444544443
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0024 Score=46.00 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~ 75 (173)
...+|+|+|+|++|...++.+.+.|. ++++++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999 79999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0069 Score=45.99 Aligned_cols=41 Identities=29% Similarity=0.274 Sum_probs=36.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
.+|.|+|+|.+|...++.+...|.+|+++++++++++.+++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 57999999999999999998899999999999887776654
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0042 Score=47.02 Aligned_cols=93 Identities=26% Similarity=0.327 Sum_probs=61.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
..+|.|+|.|.+|.+.++..+..|..+.+++++.+ +.+...+ +|. ++....+.........|+||=+++... .
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~-lgv---~d~~~~~~~~~~~~~aD~VivavPi~~-~ 77 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALE-LGV---IDELTVAGLAEAAAEADLVIVAVPIEA-T 77 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhh-cCc---ccccccchhhhhcccCCEEEEeccHHH-H
Confidence 46788999999999999999999997766655544 4444444 663 222111222223447899999999873 4
Q ss_pred HHHHHh----hhcCCEEEEeCCCC
Q 030694 121 MPLIGL----LKSQGKLVLLGAPE 140 (173)
Q Consensus 121 ~~~~~~----l~~~G~~v~~g~~~ 140 (173)
...+.. ++++..++.+++..
T Consensus 78 ~~~l~~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 78 EEVLKELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred HHHHHHhcccCCCCCEEEeccccc
Confidence 444444 44677788887544
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0051 Score=50.67 Aligned_cols=96 Identities=20% Similarity=0.120 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH--cC----------CCEEeeCCChHHHHHhcCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER--LG----------ADSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~--~g----------~~~v~~~~~~~~~~~~~~~~ 107 (173)
++.++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++. +. .-+++..+..+++++..+++
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f 374 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF 374 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence 457899999986 3555566666544 5999999999988887772 11 11233333344554445689
Q ss_pred cEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+-....+. .++.+.+.|+|+|.++...
T Consensus 375 DvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 375 DVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 99986654431 2457788999999988764
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0038 Score=48.65 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.++...+...+ +.. .+ .|-.+.+.+.+...++|++|.+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 56789999998 99999999999999999999988776555443322 111 12 23334455555556899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 75
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0021 Score=50.04 Aligned_cols=77 Identities=27% Similarity=0.428 Sum_probs=51.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------chHHHHHHH---cCCCE-E--ee
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKSEAVER---LGADS-F--LV 93 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~---------------------~~~~~~~~~---~g~~~-v--~~ 93 (173)
...+|+|+|+|++|..++..+...|. ++++++.+. .|.+.+.+. ++.+. + +.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 45889999999999999999999999 899998863 122222221 33221 1 11
Q ss_pred -CCChHHHHHhcCCccEEEEcCCCcc
Q 030694 94 -SRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 94 -~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.-..+...++..++|++++|+.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123344555678999999999874
|
|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0056 Score=46.37 Aligned_cols=95 Identities=20% Similarity=0.221 Sum_probs=71.8
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHH----CCCeEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA----MGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~----~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++.. .+++|++..+....
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~------------------ 197 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPD------------------ 197 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchh------------------
Confidence 468887777777888776678999999998 6889998888887 78888887654322
Q ss_pred hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 198 ---l~~~~~~ADIVI~AvG~p~li~~--~~vk~GavVIDVGi~ 235 (286)
T PRK14184 198 ---LAEECREADFLFVAIGRPRFVTA--DMVKPGAVVVDVGIN 235 (286)
T ss_pred ---HHHHHHhCCEEEEecCCCCcCCH--HHcCCCCEEEEeeee
Confidence 22233467899999999865544 446999999999854
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0034 Score=46.48 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=52.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--E--EeeCCChHHHHHh-------cCCccEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--S--FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~-------~~~~d~v 110 (173)
+++++|.|+ |.+|...+..+...|++|++++++.++.+.+.+.+... + ..|-.+.+.+... .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 99999999998889999999999888776655534211 1 2344444333221 1369999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999985
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.009 Score=45.86 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=60.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc-------CCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+|.|+|+|.+|..++..+...|. +++++++++++.+.....+ +....+...+. .+ ..+.|++|.++|
T Consensus 2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~---~~-l~~aDIVIitag 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY---SD-CKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH---HH-hCCCCEEEEccC
Confidence 68999999999999998888884 7999999888755443333 22211211111 12 358999999999
Q ss_pred Ccc---------------chH---HHHHhhhcCCEEEEeCCCC
Q 030694 116 AVH---------------PLM---PLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 116 ~~~---------------~~~---~~~~~l~~~G~~v~~g~~~ 140 (173)
.+. .+. ..+..-+|.+.++.++++-
T Consensus 78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~ 120 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPV 120 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChH
Confidence 751 122 3333446778888887543
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0022 Score=48.67 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=51.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc------CCC-EEeeCC----------ChHHHHHhcCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL------GAD-SFLVSR----------DQDEMQAAMGT 106 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~------g~~-~v~~~~----------~~~~~~~~~~~ 106 (173)
++|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+.. +.. ..++.. ......+...+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 4799999999999999998889999999999999887765421 100 001100 00112233458
Q ss_pred ccEEEEcCCCcc
Q 030694 107 MDGIIDTVSAVH 118 (173)
Q Consensus 107 ~d~vid~~g~~~ 118 (173)
.|++|+|++...
T Consensus 82 aD~Vi~avpe~~ 93 (288)
T PRK09260 82 ADLVIEAVPEKL 93 (288)
T ss_pred CCEEEEeccCCH
Confidence 999999999873
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00089 Score=51.00 Aligned_cols=124 Identities=32% Similarity=0.385 Sum_probs=72.8
Q ss_pred eeEECCCCCCcccccchhhHHHHHHH--HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYS--PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAV 83 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~--~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~ 83 (173)
.++.+++++.+-.. ....|... ++.+. .+++++||=+|+| .|.+++..++ +|+ +|++++.++.-.+.++
T Consensus 130 ~~I~idPg~AFGTG----~H~TT~lcl~~l~~~--~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~ 201 (295)
T PF06325_consen 130 IVIEIDPGMAFGTG----HHPTTRLCLELLEKY--VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAAR 201 (295)
T ss_dssp EEEEESTTSSS-SS----HCHHHHHHHHHHHHH--SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHH
T ss_pred EEEEECCCCcccCC----CCHHHHHHHHHHHHh--ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHH
Confidence 44555555544433 24444332 33443 4788999999986 4555555555 687 8999999988777766
Q ss_pred HHc---C-CCEEeeCCChHHHHHhcCCccEEEEcCCCcc---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 84 ERL---G-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 84 ~~~---g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++. | .+.+......+. ..+++|+|+-+.-... ..+...++++++|.+++.|....
T Consensus 202 ~N~~~N~~~~~~~v~~~~~~---~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 202 ENAELNGVEDRIEVSLSEDL---VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHHTT-TTCEEESCTSCT---CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHHcCCCeeEEEEEeccc---ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 632 2 222211111111 1268999997766552 23355678899999999997654
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0033 Score=47.43 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=55.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CC------EEeeCCChHHH--------HH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD------SFLVSRDQDEM--------QA 102 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~--------~~ 102 (173)
-.++.++|.|+ .++|.+.+..+...|++|+++.+++++.+.....+. .. ...|-...+.. ++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999998 899999999999999999999999998777665432 21 12233333222 22
Q ss_pred hcCCccEEEEcCCCc
Q 030694 103 AMGTMDGIIDTVSAV 117 (173)
Q Consensus 103 ~~~~~d~vid~~g~~ 117 (173)
..+++|+.+++.|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 245899999999875
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0042 Score=47.58 Aligned_cols=85 Identities=19% Similarity=0.296 Sum_probs=58.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|+++.|+|.|.+|...++.++..|++|++.+++..+ .+..... ..++++....|+++.+++....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~~-----~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSIY-----MEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCccccc-----CCHHHHHhhCCEEEECCCCCchhh
Confidence 5899999999999999999999999999999986321 1211111 1233445567888877775421
Q ss_pred ---hHHHHHhhhcCCEEEEeCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (173)
-...+..|+++..++.++.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1255677777777777764
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0049 Score=46.23 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=63.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC------CC--EEeeCCChHHHHHhcCCcc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG------AD--SFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g------~~--~v~~~~~~~~~~~~~~~~d 108 (173)
.++++++||-+|+| .|..+..+++..+ .+|++++.+++-++.+++... .. .++..+..+ +.-..+.+|
T Consensus 70 ~~~~~~~VLDlGcG-tG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~-lp~~~~sfD 147 (261)
T PLN02233 70 GAKMGDRVLDLCCG-SGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD-LPFDDCYFD 147 (261)
T ss_pred CCCCCCEEEEECCc-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-CCCCCCCEe
Confidence 45789999999986 3556666777655 489999999998887765322 11 122211111 110123699
Q ss_pred EEEEcCCCc------cchHHHHHhhhcCCEEEEeCCC
Q 030694 109 GIIDTVSAV------HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 109 ~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.|+...+-. ..+..+.+.|+|||+++.+-..
T Consensus 148 ~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 148 AITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 997654322 2467888999999998877543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0039 Score=46.32 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|+|+ |++|..+++.+...|++|++++++++..+...+ ..+.. ...|-.+.+.+.+. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 999999999999999999999988753333222 12322 12333443332222 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99999985
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0037 Score=46.02 Aligned_cols=76 Identities=17% Similarity=0.310 Sum_probs=51.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EE--eeCC--ChHH-------HHHh
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SF--LVSR--DQDE-------MQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v--~~~~--~~~~-------~~~~ 103 (173)
.++++++|.|+ |++|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|.. +.+. +.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 57889999998 99999999999889999999999887655443322 211 12 2222 2211 2222
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|.+|.+.|.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 3479999998875
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0037 Score=48.35 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=57.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
.|+++.|+|.|.+|...++.++ ..|++|+..++.... +.... ++.... .++++....|++.-+++...
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~~-~~~~~~-------~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK-EAEER-FNARYC-------DLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch-hhHHh-cCcEec-------CHHHHHHhCCEEEEeCCCChHH
Confidence 5799999999999999999998 899999988765322 11122 443211 13344556777776666431
Q ss_pred --c-hHHHHHhhhcCCEEEEeC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g 137 (173)
. -...+..|+++..+|.++
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAG 236 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECC
Confidence 1 125667777777776665
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0074 Score=45.67 Aligned_cols=96 Identities=22% Similarity=0.315 Sum_probs=71.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHH--CCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~--~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 98 (173)
.+||+....+..+..+..--.|++++|+|. ..+|.-++.++.. .+++|++.-+....
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~-------------------- 196 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRD-------------------- 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCC--------------------
Confidence 468887777877877776567999999998 7889999888887 68888776543211
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+.....|+++-++|.+..+. -..+++|..++.+|...
T Consensus 197 -l~~~~k~ADIvV~AvGkp~~i~--~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 197 -LAAHTRRADIIVAAAGVAHLVT--ADMVKPGAAVLDVGVSR 235 (284)
T ss_pred -HHHHHHhCCEEEEecCCcCccC--HHHcCCCCEEEEccccc
Confidence 2233446799999999986443 34589999999999543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0038 Score=46.21 Aligned_cols=75 Identities=16% Similarity=0.249 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE---EeeCCChHHHHH-------hcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS---FLVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~~~ 106 (173)
++++++|.|+ +++|..+++.+...|++|+++++++++ .+.+.+. .+... ..|-.+.+.+.+ ..++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 899999999999999999999987543 2333221 23221 123333332222 1247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999985
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.008 Score=45.53 Aligned_cols=96 Identities=18% Similarity=0.308 Sum_probs=70.8
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC----CCeEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~----g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
.-+||+....+..+..+..--.|++++|+|. ..+|.=++.++... +++|++.-+...
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~------------------ 192 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSE------------------ 192 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCC------------------
Confidence 3567877777777877776578999999998 68899999998888 677776543221
Q ss_pred ChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 193 ---~l~~~~~~ADIvV~AvG~p~~i~--~~~ik~GavVIDvGin 231 (287)
T PRK14181 193 ---NLTEILKTADIIIAAIGVPLFIK--EEMIAEKAVIVDVGTS 231 (287)
T ss_pred ---CHHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 12233446799999999986544 3458999999999954
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0026 Score=47.11 Aligned_cols=81 Identities=23% Similarity=0.402 Sum_probs=52.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch-------------------HH----HHHHHcCCC-EE--eeC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------KS----EAVERLGAD-SF--LVS 94 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~-------------------~~----~~~~~~g~~-~v--~~~ 94 (173)
.+.+|+|+|+|++|..+++.+.+.|. ++++++.+.-+ .+ .+++ ++.+ .+ ++.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~-inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQ-INPHIAINPINA 101 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHH-HCCCcEEEEEec
Confidence 35789999999999999999999998 88887765322 11 2222 2221 11 111
Q ss_pred -CChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 95 -RDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 95 -~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
-+.+...++..++|+++||+.+.. ....+
T Consensus 102 ~i~~~~~~~~~~~~DlVvd~~D~~~-~r~~l 131 (240)
T TIGR02355 102 KLDDAELAALIAEHDIVVDCTDNVE-VRNQL 131 (240)
T ss_pred cCCHHHHHHHhhcCCEEEEcCCCHH-HHHHH
Confidence 112334455668999999999885 34333
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0039 Score=45.40 Aligned_cols=97 Identities=23% Similarity=0.256 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCCE---EeeC-CChHHHHH-hcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GADS---FLVS-RDQDEMQA-AMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~-~~~~~~~~-~~~~~d~v 110 (173)
+..+++|-+|.+ +|..+++++..+. .+++.+++++++.+.+++.+ |.+. ++.. +..+.+.+ ..+.||++
T Consensus 58 ~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDli 136 (219)
T COG4122 58 SGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDLV 136 (219)
T ss_pred cCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccEE
Confidence 567899999864 4566666666665 48999999999999998855 4332 2221 33344443 34689999
Q ss_pred EEcCC-Cc--cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVS-AV--HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g-~~--~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|-=.. .. ..++.+++.|++||.++.-..
T Consensus 137 FIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 137 FIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred EEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 74333 32 357789999999999886653
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.003 Score=46.79 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~-------~~~~~ 107 (173)
.+++++|.|+ +++|...++.+...|++++++++++++.+.+.+. .+.+ . ..|-.+.+.+.+ ..+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999887766554332 2322 1 234444433322 12479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0068 Score=46.41 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=49.3
Q ss_pred EEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC--CE----EeeCCChHHHHH----h---cCCccEEE
Q 030694 47 GVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA--DS----FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 47 lI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~--~~----v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
+|.|+ +++|+.+++.+...| ++|+++++++++.+.+.+.++. .. ..|-.+.+.+++ + .+++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 47888 899999999998899 8999999988877666554431 11 234444433222 2 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99985
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.005 Score=46.95 Aligned_cols=89 Identities=24% Similarity=0.238 Sum_probs=58.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-------EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-------FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-------v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|+|+|+|.+|...+..+...|.+|+.+++ +++.+.+++ .|... .+.........+....+|++|-|+...
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~ 79 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE-RGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh-CCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence 689999999999888888888999999999 777777766 45211 000000111122235799999999877
Q ss_pred cchHHHHHhhh----cCCEEEEe
Q 030694 118 HPLMPLIGLLK----SQGKLVLL 136 (173)
Q Consensus 118 ~~~~~~~~~l~----~~G~~v~~ 136 (173)
. +...+..++ ++..++.+
T Consensus 80 ~-~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 80 Q-LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred C-HHHHHHHHHhhcCCCCEEEEe
Confidence 3 555555554 44455555
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.011 Score=42.01 Aligned_cols=84 Identities=19% Similarity=0.262 Sum_probs=55.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCcc--
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~-- 118 (173)
+++|.|+ |++|...++.+... .+|+.+++++.. ...|-.+.+.+++. .+++|+++.+.|...
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 6899998 89999988887777 899999887531 12344443333332 247999999988521
Q ss_pred -----------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 119 -----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 119 -----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..+..++.++++|+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 1223345566789988887544
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0079 Score=44.16 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHc---CCCEEeeCCChH--HHHHhcCCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERL---GADSFLVSRDQD--EMQAAMGTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~--~~~~~~~~~d~vi 111 (173)
..++++++|+=+|+| .|..+..+++..+ .+|++++.+++.++.+.+.. ..-..+..+..+ ....+.+.+|+++
T Consensus 68 l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~ 146 (226)
T PRK04266 68 FPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIY 146 (226)
T ss_pred CCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEE
Confidence 455899999999985 2444455555543 48999999998766554421 111222222111 1112334699999
Q ss_pred EcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
.....+. .+..+.+.|+|||+++..
T Consensus 147 ~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 147 QDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 6555432 256777899999998883
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0038 Score=44.67 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHHHhcCCccEEEEcCCC-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSA- 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid~~g~- 116 (173)
.++.+||-+|+| .|..+..+++ .|++|++++.+++-.+.+++.. +........+... ....+.+|+++.+..-
T Consensus 29 ~~~~~vLDiGcG-~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~I~~~~~~~ 105 (195)
T TIGR00477 29 VAPCKTLDLGCG-QGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINA-AALNEDYDFIFSTVVFM 105 (195)
T ss_pred CCCCcEEEeCCC-CCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchh-ccccCCCCEEEEecccc
Confidence 456789999986 4666666665 5889999999988766665422 2210011011110 0123479999865321
Q ss_pred -------ccchHHHHHhhhcCCEEEEe
Q 030694 117 -------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 117 -------~~~~~~~~~~l~~~G~~v~~ 136 (173)
+..+..+.+.|+|||.++.+
T Consensus 106 ~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 106 FLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 12456778899999985544
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0042 Score=46.53 Aligned_cols=86 Identities=22% Similarity=0.284 Sum_probs=59.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC---CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g---~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.++.|+|+|.+|...++.....| .+|+++++++++.+.+.+.+|.. +. .+ ..+.....|++|-|+... .+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-~~-~~----~~~~~~~advVil~v~~~-~~ 75 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-AA-TD----NQEAAQEADVVVLAVKPQ-VM 75 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-ec-CC----hHHHHhcCCEEEEEcCHH-HH
Confidence 46899999999999888877777 68999999988888777745642 21 11 112234789999998776 46
Q ss_pred HHHHHhhhcC--CEEEEe
Q 030694 121 MPLIGLLKSQ--GKLVLL 136 (173)
Q Consensus 121 ~~~~~~l~~~--G~~v~~ 136 (173)
...++.+++. ..++.+
T Consensus 76 ~~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 76 EEVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHHhhcCCEEEEe
Confidence 6666666553 344444
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0028 Score=52.30 Aligned_cols=94 Identities=19% Similarity=0.097 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
..+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ ..+......|++++|++....
T Consensus 377 ~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~--~~~~~~~~~diiINtT~vGm~~ 453 (529)
T PLN02520 377 LAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLAD--LENFHPEEGMILANTTSVGMQP 453 (529)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhH--hhhhccccCeEEEecccCCCCC
Confidence 3478999999999999999999999999999999988888777656532 222211 111112357889988865410
Q ss_pred ----hHHHHHhhhcCCEEEEeC
Q 030694 120 ----LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ----~~~~~~~l~~~G~~v~~g 137 (173)
..-....+++.+.++.+-
T Consensus 454 ~~~~~pl~~~~l~~~~~v~D~v 475 (529)
T PLN02520 454 NVDETPISKHALKHYSLVFDAV 475 (529)
T ss_pred CCCCCcccHhhCCCCCEEEEec
Confidence 011224466666666664
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0032 Score=46.25 Aligned_cols=75 Identities=20% Similarity=0.300 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
+++++||.|+ |.+|..+++.+...|++|++++++.++...+.+. .+.. .+ .|..+.+.+++. .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999999999988776655442 2221 12 233333332222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999984
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0019 Score=49.41 Aligned_cols=71 Identities=20% Similarity=0.243 Sum_probs=53.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+++|.|+ |.+|..+++.+...|.+|+++++++++...+.. .+... ..|..+.+.+.+...++|++|.+.+.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 6899998 999999999999999999999998776543333 34332 23555556666666789999998864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0036 Score=47.98 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----------chHHHHHHH---cCCCE---EeeCCChHHHH---
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAVER---LGADS---FLVSRDQDEMQ--- 101 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~----------~~~~~~~~~---~g~~~---v~~~~~~~~~~--- 101 (173)
.+++++|.|+ +++|+.+++.+...|++|+++++++ ++.+.+.+. .|... ..|-.+.+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4789999998 8999999999999999999999873 333333221 33221 12333333222
Q ss_pred -Hh---cCCccEEEEcC-C
Q 030694 102 -AA---MGTMDGIIDTV-S 115 (173)
Q Consensus 102 -~~---~~~~d~vid~~-g 115 (173)
++ .+++|++|++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 22 25799999998 6
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0054 Score=47.52 Aligned_cols=100 Identities=22% Similarity=0.325 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+...++.|+|+|..|...++... ..+. +|.++++++++.+.+.+++. ....+ ..+ .++... .|+|+.|+
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aDiVv~aT 201 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CDILVTTT 201 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CCEEEEec
Confidence 56788999999999988877665 3456 78888999888877766543 22111 222 222334 89999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCCC-CCcccC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELP 146 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 146 (173)
+....+ -....+++|-.+..+|... +...++
T Consensus 202 ps~~P~-~~~~~l~~g~hV~~iGs~~p~~~El~ 233 (326)
T PRK06046 202 PSRKPV-VKAEWIKEGTHINAIGADAPGKQELD 233 (326)
T ss_pred CCCCcE-ecHHHcCCCCEEEecCCCCCccccCC
Confidence 976422 2234578988888999654 333444
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0034 Score=46.52 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCC--EE--eeCCChHHHHH----h---cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGAD--SF--LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~v--~~~~~~~~~~~----~---~~~ 106 (173)
+++++|.|+ |.+|...++.+...|++|+.++++.++.+.+.+. .+.. .. .|-.+.+.+.+ + .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 8999999999999999999999987766554332 2211 11 23333332222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 9999999985
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0037 Score=45.68 Aligned_cols=71 Identities=25% Similarity=0.322 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHhc---CCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAAM---GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~---~~~d~vid~ 113 (173)
.+++++|+|+ |.+|..+++.+...|+ +|+++++++++.+. .+.. . ..|-.+.+.+.+.. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999998 9999999999999999 99999998776543 2211 1 13444444433332 368999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 987
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0035 Score=45.46 Aligned_cols=72 Identities=21% Similarity=0.245 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHH----hc-CCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQA----AM-GTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~----~~-~~~d~vid~~g~ 116 (173)
++++|+|+ |++|...++.+...|++|+++++++++.+.+.. .+.. ...|-.+.+.+.. +. +++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47899998 999999999888899999999999887777665 4532 2334444443333 22 269999998876
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0065 Score=44.57 Aligned_cols=82 Identities=17% Similarity=0.332 Sum_probs=61.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH-HHHHcCCCE-EeeCCChHHHHHh-cCCccEEEEcCCCccchH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE-AVERLGADS-FLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~-~~~~~g~~~-v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~ 121 (173)
+++|+|+|.+|...++.+...|..|+.+++++++.+. +.++++... ..+..+.+.+.+. ...+|+++=++|... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 6889999999999999999999999999999998777 333344332 3455566777666 358999999999863 44
Q ss_pred HHHHhh
Q 030694 122 PLIGLL 127 (173)
Q Consensus 122 ~~~~~l 127 (173)
..+-++
T Consensus 81 ~i~~~l 86 (225)
T COG0569 81 SVLALL 86 (225)
T ss_pred HHHHHH
Confidence 444333
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0075 Score=45.36 Aligned_cols=99 Identities=26% Similarity=0.427 Sum_probs=58.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc-------------------hHHHHHHH---cCCC-EEeeCC--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAVER---LGAD-SFLVSR-- 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~~~---~g~~-~v~~~~-- 95 (173)
.+.+|+|+|+|++|..++..+.+.|. ++++++.+.- |.+.+.+. ++.+ .+....
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 56889999999999999999999996 8988886522 11122121 2221 121111
Q ss_pred -ChHHHHHhc-CCccEEEEcCCCccchHHHHHhhh-cCCEEEEeCCCC
Q 030694 96 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE 140 (173)
Q Consensus 96 -~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 140 (173)
..+...++. .++|+||||......-..+....+ .+=.++.+|...
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 123333343 479999999998633333333333 344566665443
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0021 Score=49.55 Aligned_cols=34 Identities=35% Similarity=0.546 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.|+++.|+|.|.+|...++.++..|++|++.++.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~ 179 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHK 179 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCC
Confidence 5789999999999999999999999999998764
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0087 Score=45.59 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=70.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC----CCeEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~----g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.=++.++... +++|++.-+....
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~------------------ 197 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDD------------------ 197 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCC------------------
Confidence 457777777777777776678999999998 78899998888877 7788775332211
Q ss_pred hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|-+..+.. ..+++|..++.+|..
T Consensus 198 ---l~~~~~~ADIvIsAvGkp~~i~~--~~ik~gaiVIDvGin 235 (297)
T PRK14167 198 ---LAAKTRRADIVVAAAGVPELIDG--SMLSEGATVIDVGIN 235 (297)
T ss_pred ---HHHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEcccc
Confidence 22234467999999999865543 568999999999943
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0061 Score=45.76 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE-E--eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~ 106 (173)
.+.++++|.|+ |.+|..+++.+...|++|++++++.++...+... .+... . .|-.+.+.+.+. .++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 34578999998 9999999999999999999999887765544332 23221 1 243443333221 247
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|.+|.+.|..
T Consensus 88 id~vi~~Ag~~ 98 (274)
T PRK07775 88 IEVLVSGAGDT 98 (274)
T ss_pred CCEEEECCCcC
Confidence 89999999863
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 173 | ||||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 1e-56 | ||
| 2cf5_A | 357 | Crystal Structures Of The Arabidopsis Cinnamyl Alco | 1e-29 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 3e-20 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 7e-15 | ||
| 1ps0_A | 360 | Crystal Structure Of The Nadp(H)-Dependent Cinnamyl | 4e-12 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 6e-11 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 2e-09 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 7e-09 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 8e-09 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 2e-07 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 4e-07 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 2e-04 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 2e-04 |
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 2e-95
Identities = 116/153 (75%), Positives = 136/153 (88%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
MVA+E +++R P+ PLD APLLCAGITVYSPL+++GLD+PG H+G+VGLGGLGHVAVK
Sbjct: 146 MVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVK 205
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
FAKA G KVTVISTSPSKK EA++ GADSFLVSRDQ++MQAA GT+DGIIDTVSAVHPL
Sbjct: 206 FAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL 265
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
+PL GLLKS GKL+L+GAPEKPLELPAF L+ G
Sbjct: 266 LPLFGLLKSHGKLILVGAPEKPLELPAFSLIAG 298
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 3e-95
Identities = 75/153 (49%), Positives = 103/153 (67%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V + FVV+IPEG ++ APLLCAG+TVYSPL +GL +PG+ G++GLGG+GH+ VK
Sbjct: 139 TVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVK 198
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
AKAMG VTVIS+S K+ EA++ LGAD +++ DQ +M ++D +IDTV H L
Sbjct: 199 IAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL 258
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
P + LLK GKL+L+G PL+ L+ G
Sbjct: 259 EPYLSLLKLDGKLILMGVINNPLQFLTPLLMLG 291
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 3e-88
Identities = 72/155 (46%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
Query: 1 MVADEHFVVRIPEG-APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 59
+V E +V+RI L A APLLCAGIT YSPLR + PG VGVVG+GGLGH+ +
Sbjct: 153 IVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGI 211
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
K A AMG V +TS +K+ A + LGAD + SR+ DEM A + + D I++TV+A H
Sbjct: 212 KLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN 270
Query: 120 LMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLLTG 153
L LLK G + L+GAP P + P F L+
Sbjct: 271 LDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMK 305
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 255 bits (654), Expect = 7e-86
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+ EHFVV IPE P APLLC G+TVYSPL G PG VG+VGLGG+G +
Sbjct: 139 VRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTL 197
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHP 119
+KAMG + VIS S K+ +A+ ++GAD ++ + ++ D + T D I+ S++
Sbjct: 198 ISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTD 256
Query: 120 L--MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
+ + +K G++V + PE+ L P
Sbjct: 257 IDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLK 292
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 6e-82
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V DE++V+ + + APL+ APLLCAGIT YSPL+F + G VGV G GGLG +AVK
Sbjct: 136 IVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKV-TKGTKVGVAGFGGLGSMAVK 194
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
+A AMG +V+V + + KK +A+ +G F Q +D II T+ + L
Sbjct: 195 YAVAMGAEVSVFARNEHKKQDAL-SMGVKHFYTDPKQ-----CKEELDFIISTIPTHYDL 248
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLE--LPAFPLL 151
+ LL G L L+G P + L F +
Sbjct: 249 KDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFI 281
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 2e-69
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
A +VV+IP+ + AP+ CAG+T Y L+ G KPG V + G+GGLGHVAV+
Sbjct: 124 CRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQ 182
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTMDGIIDTVSAV 117
+AKAMG+ V + K A + LGAD + +D M+ +G + + T +
Sbjct: 183 YAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSK 241
Query: 118 HPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
++ G VL+G P + + +P F +
Sbjct: 242 PAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNG 278
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 5e-68
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+VAD ++V +P+ AP+LCAG+TVY L+ +PG V + G+GGLGHVAV+
Sbjct: 126 VVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIGGLGHVAVQ 184
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTMDGIIDTVSAV 117
+A+AMG++V + +K + A RLGA+ + +RD D +Q +G G++ T +
Sbjct: 185 YARAMGLRVAAVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSP 243
Query: 118 HPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
IG+++ G + L G P P F ++
Sbjct: 244 KAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKG 280
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 2e-63
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 59
AD IP+G L AP+LCAGITVY L+ L G V + G GGLG +AV
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAV 187
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE-----MQAAMGTMDGIIDTV 114
++AKAMG +V I K+ +G + F+ + + ++A G G+I+
Sbjct: 188 QYAKAMGYRVLGIDGGEGKEELF-RSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTG 153
+ + +++ G VL+G P F +
Sbjct: 247 VSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVK 286
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-31
Identities = 39/161 (24%), Positives = 59/161 (36%), Gaps = 7/161 (4%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGLGGLGHV 57
M+ + APL AG T +R + V V G+GGL
Sbjct: 126 MLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVY 185
Query: 58 AVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDE--MQAAMGTM-DGIIDT 113
++ KA+ +T++ S SK + LGAD +D + + G ID
Sbjct: 186 TIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDL 245
Query: 114 VSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
V L LL +G ++L+G K + L AF
Sbjct: 246 VGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWN 286
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 6e-30
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAV 59
++ + + APL C+GIT Y +R L P + VVG GGLG +AV
Sbjct: 130 VIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAV 188
Query: 60 KFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDT 113
+ AKA+ G + + EA +R GAD + + QD + +D +ID
Sbjct: 189 QIAKAVSGATIIGVDVREEAV-EAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247
Query: 114 VSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
++ L L QGK V++G L A + E
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSE 288
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-28
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 1 MVADEHFVVRIPEGAPLDAT---APLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGH 56
M V+++P+ + APL AGIT Y ++ PG +V +VG+GGLGH
Sbjct: 141 MRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGH 200
Query: 57 VAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQD--EMQAAMGTM--DGII 111
+AV+ K M V + K + ERLGAD + +R ++ + +
Sbjct: 201 IAVQLLKVMTPATVIALDVKEEKL-KLAERLGADHVVDARRDPVKQVMELTRGRGVNVAM 259
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
D V + + LL G+L+++G + L P +++ E
Sbjct: 260 DFVGSQATVDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSE 301
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-27
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 7/160 (4%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAV 59
M+ D + A APL AG+T Y + PG V+G+GGLGHV +
Sbjct: 129 MIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGI 188
Query: 60 KFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTV 114
+ +A+ +V + + +GAD+ + S D ++ G + D V
Sbjct: 189 QILRAVSAARVIAVDLDDDRL-ALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV 247
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
A + ++ G + ++G F ++
Sbjct: 248 GAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFG 287
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-16
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 11/161 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 61
+ E V+++ E LD A +C+G T Y Y G V + G G LG V
Sbjct: 155 LDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVI 214
Query: 62 AKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQD--EMQAAMGTM------DGIID 112
A+++G V VI+ SP++ A E +GAD L R+ E + A+ + D I++
Sbjct: 215 ARSLGAENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 273
Query: 113 TVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
L+ LL+ G + G +P F +
Sbjct: 274 ATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVP-FKVYEW 313
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-16
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V + V+ +P+ + A L C +T + L V +VG G + ++ +
Sbjct: 102 TVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPL-TKQREVLIVGFGAVNNLLTQ 160
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
G V S S + G Q + I D V++ +
Sbjct: 161 MLNNAG--YVVDLVSASLSQALAAKRGVRHLYREPSQVTQK-----YFAIFDAVNSQN-A 212
Query: 121 MPLIGLLKSQGKLVLLGAPEKPLELPAF 148
L+ LK+ G ++ + PAF
Sbjct: 213 AALVPSLKANGHIICIQDRIPAPIDPAF 240
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 8e-16
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAV 59
+ A +++ E A L AG+T L + K G V + GG+GH+A+
Sbjct: 112 VCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAI 170
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119
+ AK G TVI+T+ + ++ LGA+ + ++D + A +D +ID V
Sbjct: 171 QLAKQKGT--TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-DV 227
Query: 120 LMPLIGLLKSQGKLVLLGAPEKPLELPA 147
+ I LK G +V + +
Sbjct: 228 GIQSIDCLKETGCIVSVPTITAGRVIEV 255
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 7e-15
Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAV 59
+V E + P+ + A + +T + + +PG V V+ G+ A+
Sbjct: 125 VVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAI 184
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV 114
+ AK G +V + S K + LGAD + D + G ++D
Sbjct: 185 QIAKLFGARVIATAGSEDKL-RRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHT 243
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGA 138
A++ +I + G++ + GA
Sbjct: 244 GALY-FEGVIKATANGGRIAIAGA 266
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 8e-15
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
+V E + V P+ + L CAG+T + L G + G V V G GG+ ++
Sbjct: 148 VVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ 207
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 115
AKA G +V V S+S +K + LGAD + ++D ++ I++
Sbjct: 208 IAKATGAEVIVTSSSR-EKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG 266
Query: 116 AVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLL 151
L + + G++ ++G E P PLL
Sbjct: 267 GAG-LGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLL 302
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 6e-14
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 1 MVADEHFVVRIPEGAPLD----ATAPLLCAGITVY------SPLRFYGLDKPGMHVGVV- 49
+ +E V + P+ + + PL GIT Y + + G + ++
Sbjct: 103 QLINERLVAKAPKN--ISAEQAVSLPL--TGITAYETLFDVFGISRNRNENEGKTLLIIN 158
Query: 50 GLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQDEMQ---AAMG 105
G GG+G +A + AKA G + VI+T S ++ E +++GAD L ++ Q +
Sbjct: 159 GAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIE 216
Query: 106 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF 148
+D + T + +I L+K +G + + A E +L A
Sbjct: 217 LVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNAL 259
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 1e-13
Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 11/145 (7%)
Query: 1 MVADEHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHV 57
D + P + + PL IT + L + G V + G GG+GHV
Sbjct: 109 AAVDARLLASKPAALTMRQASVLPL--VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHV 166
Query: 58 AVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTV 114
A++ A A G V +T+ E V LGA SR+ ++ A D + DT+
Sbjct: 167 AIQIALARG--ARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTL 224
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139
L +K G +V
Sbjct: 225 GGPV-LDASFSAVKRFGHVVSCLGW 248
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 4e-13
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 12/151 (7%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG----LDKPGMHVGVVG-LGGLG 55
+V + V P+ A L +T +S + G + G V ++G GG+G
Sbjct: 138 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 197
Query: 56 HVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD--EMQAAMGTMDGIIDT 113
A++ KA V + SE V +LGAD + + E ++ D I+D
Sbjct: 198 TFAIQVMKAWD--AHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDN 255
Query: 114 VSAVHPLMPLIGLLKSQ--GKLVLLGAPEKP 142
V LK V L P
Sbjct: 256 VGG-STETWAPDFLKKWSGATYVTLVTPFLL 285
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 8e-13
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 16/164 (9%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
V + + P+ P + PL A V + L G V + G G LG +
Sbjct: 129 AVVPAQNIWKNPKSIPPEYATLQEPLGNA---VDTVLAG---PISGKSVLITGAGPLGLL 182
Query: 58 AVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----II 111
+ AKA G V V S ++ A +++GAD + ++D ++ M DG +
Sbjct: 183 GIAVAKASGAYPVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVMDITDGNGVDVFL 241
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+ A L + + G++ LLG + + L+ +
Sbjct: 242 EFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKA 285
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-12
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
+V V +P P++ A P+ +++ +V ++G G +G +
Sbjct: 121 IVVKRKNVFALPTDMPIEDGAFIEPITVG---LHAFHL--AQGCENKNVIIIGAGTIGLL 175
Query: 58 AVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----II 111
A++ A A+G VT I S K + A + GA S + Q + I+
Sbjct: 176 AIQCAVALGAKSVTAIDISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLRELRFNQLIL 234
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150
+T + + + +L L+G + L L +
Sbjct: 235 ETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATF 273
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-12
Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GGLGHV 57
V ++ P + A T Y L K G V + G GGLG
Sbjct: 177 GVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSY 236
Query: 58 AVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117
A++F K G + +S K+ AV LG D + + +++T +
Sbjct: 237 AIQFVKNGGGIPVAVVSSAQKE-AAVRALGCDLVINRAELGITDDIADDPRRVVETGRKL 295
Query: 118 HPLMPLIG 125
L+
Sbjct: 296 AKLVVEKA 303
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 3e-12
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GGLGHV 57
+ + ++ P+ + A T Y L R K G +V + G GGLG
Sbjct: 185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSY 244
Query: 58 AVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98
A +FA A G + +SP K E +GA++ + +
Sbjct: 245 ATQFALAGGANPICVVSSPQKA-EICRAMGAEAIIDRNAEG 284
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 5e-12
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
+ ++ +PEG + A + +T Y L+ +PG V V G LG AV+
Sbjct: 86 AVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQ 144
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120
A+AMG++V ++ P K LGA+ + E A G +D +++ +
Sbjct: 145 VARAMGLRVLAAASRPEKL-ALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKE--V 201
Query: 121 MPLIGLLKSQGKLVLLGAP--EKPLELPAFPLL 151
+GLL G+LV +GA E +P L+
Sbjct: 202 EESLGLLAHGGRLVYIGAAEGEVA-PIPPLRLM 233
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 5e-12
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 14/156 (8%)
Query: 1 MVADEHFVVRIPEGAPLDA--TAPLLCA---------GITVYSPLRFYGLDKPGMHVGVV 49
D ++V+IP+ PL V VV
Sbjct: 128 WYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVV 187
Query: 50 GLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAVERLGADSFLVSRDQDEMQAAMGTM 107
G G +G + + G++V + + + +E + + S D+++ ++G
Sbjct: 188 GTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKF 247
Query: 108 DGIIDTV-SAVHPLMPLIGLLKSQGKLVLLGAPEKP 142
D IID + V+ L +I LL G L L G
Sbjct: 248 DVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG 283
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 5e-12
Identities = 25/160 (15%), Positives = 43/160 (26%), Gaps = 21/160 (13%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV------------ 49
V +IP+G + A L T ++ GL P
Sbjct: 112 VTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVY 171
Query: 50 -GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ----AAM 104
G V ++ + G I+T + + GA+ R + Q
Sbjct: 172 GGSTATATVTMQMLRLSG--YIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTK 229
Query: 105 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLV--LLGAPEKP 142
+ +D ++ V + G L PE
Sbjct: 230 NNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHA 269
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 27/171 (15%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDK----PGMHVGVVGLGG 53
++ IP A PL C +G+D G V ++G G
Sbjct: 143 VLVPRKQAFEIPLTLDPVHGAFCEPLACC---------LHGVDLSGIKAGSTVAILGGGV 193
Query: 54 LGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG--- 109
+G + V+ A+ G V + + +K+ A E +GA + + D ++A G +
Sbjct: 194 IGLLTVQLARLAGATTVILSTRQATKRRLA-EEVGATATVDPSAGDVVEAIAGPVGLVPG 252
Query: 110 ----IIDTVSAVHPLMPLIGLLKSQGKLVLLG--APEKPLELPAFPLLTGE 154
+I+ + L K+ G +V+LG + +E+ F +L E
Sbjct: 253 GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRE 303
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 27/170 (15%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V E + R+ + A L+ + C + Y PG V GLG +G A+
Sbjct: 154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAII 213
Query: 61 FAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQD--------EMQA--------A 103
K G ++ I + K +A + LGA L R+ D E+ A
Sbjct: 214 GCKIAGASRIIAIDINGEKFPKA-KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272
Query: 104 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
GT + V G ++GA + +P ++ G
Sbjct: 273 AGTAQTLKAAVDCTV---------LGWGSCTVVGAKVDEMTIPTVDVILG 313
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 2e-11
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 8/161 (4%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
++ E+ V++ + P++ PL C T P G G +G A+
Sbjct: 149 ALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL 208
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVS 115
AK G + + S+ A + LGA + S+ QD + A G ++ +++
Sbjct: 209 AAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQDPVAAIKEITDGGVNFALESTG 267
Query: 116 AVHPLMPLIGLLKSQGKLVLLGAP--EKPLELPAFPLLTGE 154
+ L + L GK+ ++GAP + LL G
Sbjct: 268 SPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGG 308
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-11
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 11/150 (7%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPL-RFYGLDKPGMHVG-----VVGLGGL 54
+ DE V R P+ A L IT + ++KP V G GG+
Sbjct: 125 HLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGV 184
Query: 55 GHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQDEMQAA---MGTMDGI 110
G +AV+ A+ +TVI+T S + E V+ LGA + + A +G +
Sbjct: 185 GSIAVQIARQRT-DLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFV 243
Query: 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140
T + L+ QG+ L+ P
Sbjct: 244 FSTTHTDKHAAEIADLIAPQGRFCLIDDPS 273
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 6e-11
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 18/166 (10%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
V F ++P+ L+ A PL V++ R + G V V+G G +G V
Sbjct: 129 YVHAADFCHKLPDNVSLEEGALLEPLSVG---VHACRR--AGVQLGTTVLVIGAGPIGLV 183
Query: 58 AVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV--SRDQDEMQAAM-------GTMD 108
+V AKA G V + SP + A + GAD LV ++E +
Sbjct: 184 SVLAAKAYGAFVVCTARSPRRLEVA-KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242
Query: 109 GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
ID + I + ++ G L+L+G + + +P E
Sbjct: 243 VTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACARE 288
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 9e-11
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
+ ++ P+G A L TV++ L G V + G G+G A++
Sbjct: 127 LLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQ 186
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSA 116
A+A G +V + S K EA ERLGA + R +D ++A G +D I+D + A
Sbjct: 187 LARAFGAEVYATAGSTGKC-EACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA 245
Query: 117 VHPLMPLIGLLKSQGKLVLLGAP--EKPLELPAFPLLT 152
+ I L G L ++ ++ P++
Sbjct: 246 AY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMV 282
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 1e-10
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 11/161 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 59
V E ++++P PL + A L T Y L + +PG V G+G +
Sbjct: 126 AVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVI 185
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVSRDQDEMQAAMGTMDG-----II 111
+ A A+G++ + + +R LGA+ + + + D +
Sbjct: 186 QIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLAL 245
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLGAP-EKPLELPAFPLL 151
+ V L+ L G +V G ++P+ L+
Sbjct: 246 NCVGG-KSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLI 285
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-10
Identities = 21/160 (13%), Positives = 51/160 (31%), Gaps = 13/160 (8%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVA 58
VA+ + + + + A ++ +T + + V+ G L +
Sbjct: 124 AVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ-EGEKAF-VMTAGASQLCKLI 181
Query: 59 VKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDT 113
+ AK G + V + ++ +GA L + D M +D
Sbjct: 182 IGLAKEEGFRPIVTVRRDEQI-ALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDA 240
Query: 114 VSAVHPLMPLIGLLKSQGKLVLLGA--PEKPLELPAFPLL 151
V+ + + + + ++ G P+ + L+
Sbjct: 241 VTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLI 279
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 2e-10
Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 17/165 (10%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
+ F ++P+ + A PL +++ R G G V V G G +G V
Sbjct: 132 YKHNAAFCYKLPDNVTFEEGALIEPLSVG---IHACRR--GGVTLGHKVLVCGAGPIGMV 186
Query: 58 AVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-------GTMDG 109
+ AKAMG +V V S ++ S+A + +GAD L + + A +
Sbjct: 187 TLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIARKVEGQLGCKPEV 245
Query: 110 IIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
I+ A + I +S G LVL+G + +P E
Sbjct: 246 TIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIRE 290
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 3e-10
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
+A +H V ++PE A + T Y L K G V V G GG+G A +
Sbjct: 130 LAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ 189
Query: 61 FAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV 114
A+A G + ++ T+ ++ + V + GA R+ + + + II+ +
Sbjct: 190 IARAYG--LKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML 247
Query: 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152
+ V+ L + LL G+++++G+ +E+ +
Sbjct: 248 ANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMA 283
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-10
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 10/162 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V ++ V +I APLD L C T + +PG V GLG +G AV
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 113
+ G ++ + +P K +A + GA F+ D E + + G +D ++
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKA-KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269
Query: 114 VSAVHPLMP-LIGLLKSQGKLVLLG-APEKPLELPAFPLLTG 153
V V + L LK G VL+G + L+ G
Sbjct: 270 VGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAG 311
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-10
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V + V +I APLD L C T Y +PG V GLGG+G +
Sbjct: 149 TVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIM 208
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 113
K G ++ + + K + A + GA + +D + +Q + G +D +
Sbjct: 209 GCKVAGASRIIGVDINKDKFARA-KEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267
Query: 114 VSAVHPLMPLIGLL-KSQGKLVLLG--APEKPLELPAFPLLTG 153
+ V + + K G V++G A + + F L+TG
Sbjct: 268 IGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTG 310
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-10
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
E ++ IPEG L A + A +T + L G + G +V + GL G+G A++
Sbjct: 122 TVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQ 181
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 115
+ G V + S K + E+LGA + + +D +A + G I+D +
Sbjct: 182 LTRMAGAIPLVTAGSQKKL-QMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240
Query: 116 AVHPLMPLIGLLKSQGKLVLLG 137
+ + L G+ VL G
Sbjct: 241 GSY-WEKNVNCLALDGRWVLYG 261
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-10
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V DE V +I +PL+ + C T Y G V GLGG+G +
Sbjct: 150 TVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM 209
Query: 61 FAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM------GTMDGIIDT 113
KA G ++ + + K ++A + +GA + +D + + G +D +
Sbjct: 210 GCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268
Query: 114 VSAVHPLMPLIGLL-KSQGKLVLLG--APEKPLELPAFPLLTG 153
+ + ++ + ++ G V++G + L + LL+G
Sbjct: 269 IGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSG 311
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 1e-09
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 9/141 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
FV +IP+ A +T Y L + GM V V GG+G +
Sbjct: 102 CTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQ 161
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSA 116
+ V T+ + K EA++ L R+ D E++ +D ++D +
Sbjct: 162 LCSTVPNVT-VFGTASTFKHEAIKDSVTH--LFDRNADYVQEVKRISAEGVDIVLDCLCG 218
Query: 117 VHPLMPLIGLLKSQGKLVLLG 137
+ + LLK G +L G
Sbjct: 219 DN-TGKGLSLLKPLGTYILYG 238
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 2e-09
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVK 60
++ P L+ T+Y G + G V V+G GG+G A++
Sbjct: 119 AVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQ 178
Query: 61 FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96
AK MG KV + + +E V+ +GAD L +
Sbjct: 179 IAKGMGAKVIAVVNRTA-ATEFVKSVGADIVLPLEE 213
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 2e-09
Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 13/162 (8%)
Query: 1 MVADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 57
+V P+ P + A P A V++ G V + G G +G +
Sbjct: 125 VVVPAENAWVNPKDLPFEVAAILEPFGNA---VHTVYAG-SG-VSGKSVLITGAGPIGLM 179
Query: 58 AVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRD--QDEMQAAMGT-MDGIIDT 113
A +A G + V +P + + A + + ++ G+ ++ +++
Sbjct: 180 AAMVVRASGAGPILVSDPNPYRLAFA-RPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEF 238
Query: 114 VSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155
+ + L G+ +LG P P+ L
Sbjct: 239 SGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRG 280
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 4e-09
Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 6/100 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR-FYGLDKPGMHVGVVG-LGGLGHVAV 59
FVV IP+ A + +T + L + + V +GH+
Sbjct: 104 KTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNL-QRNDVLLVNACGSAIGHLFA 162
Query: 60 KFAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQD 98
+ ++ + +I+ +K +E + RLGA + +
Sbjct: 163 QLSQILN--FRLIAVTRNNKHTEELLRLGAAYVIDTSTAP 200
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 7e-09
Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 1 MVADEHFVVRIPEGA-------PLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVG 50
+ D + + E A + P A + + G +PG +V ++G
Sbjct: 165 VKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA---YNAVIVRGGGIRPGDNVVILG 221
Query: 51 LGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109
G +G AV K G KV + S +++ A + LGAD + ++ ++A + +G
Sbjct: 222 GGPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHVIDPTKENFVEAVLDYTNG 280
Query: 110 -----IIDTVSAVHPLMPLIGLLKSQGK-----LVLLGAPEKPLELPAFPLLTGE 154
++ + P I + + + + ++ + + L
Sbjct: 281 LGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRR 335
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-08
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
V + V +I APL++ + C T Y PG V GLGG+G A+
Sbjct: 151 TVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIV 209
Query: 61 FAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 113
KA G ++ + T K +A LGA L +D D+ + + G +D ++
Sbjct: 210 GCKAAGASRIIGVGTHKDKFPKA-IELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268
Query: 114 VSAVHPL-MPLIGLLKSQGKLVLLG--APEKPLELPAFPLLTG 153
+ + L G V+LG +P + L L LLTG
Sbjct: 269 AGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG 311
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-08
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAV 59
V +P P LL +G T Y L+ G G V +V GG G A+
Sbjct: 125 VVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKV-LVTAAAGGTGQFAM 181
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98
+ +K V +S +KS ++ LG D + + +
Sbjct: 182 QLSKKAKCHVIGTCSSD-EKSAFLKSLGCDRPINYKTEP 219
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 4e-08
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ 101
G +V V+GLG +G + A+G KV V + + E +G + F +
Sbjct: 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF----HISKAA 208
Query: 102 AAMGTMDGIIDTV 114
+ +D I+T+
Sbjct: 209 QELRDVDVCINTI 221
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 1e-07
Identities = 14/99 (14%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 59
+ +PEGA A +T + L + + LG +
Sbjct: 131 RCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRL-EGHSALVHTAAASNLGQMLN 189
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98
+ G+K+ I + + ++ GA +
Sbjct: 190 QICLKDGIKLVNIVRKQEQA-DLLKAQGAVHVCNAASPT 227
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-07
Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 10/162 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATA--PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHV 57
+ E ++VRIP P+ + + D V+G G LG +
Sbjct: 128 FTSPEKYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLL 187
Query: 58 AVKFAKAMG---VKVTVISTS--PSKKSEAVERLGADSFLVSRD-QDEMQAAMGTMDGII 111
+ K + + P + +E L A + +++ MD I
Sbjct: 188 TLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIY 247
Query: 112 DTVSAVHPLMPLIGLLKSQGKLVLLG-APEKPLELPAFPLLT 152
+ + + L G LLG + E+ A
Sbjct: 248 EATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHR 289
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 5e-07
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVK 60
+P + A G+TVY LR KP GG+G +A +
Sbjct: 100 NIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159
Query: 61 FAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQD 98
+AKA+G +I T + K+++ + GA + R++D
Sbjct: 160 WAKALG--AKLIGTVGTAQKAQSALKAGAWQVINYREED 196
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-06
Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 24/169 (14%)
Query: 1 MVADEHFVVRIP-----EGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLG 55
+ + +I GA L+ PL + + R + G V + G G +G
Sbjct: 141 VNHPAVWCHKIGNMSYENGAMLE---PL---SVALAGLQRAG--VRLGDPVLICGAGPIG 192
Query: 56 HVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRD----QDEMQAAMGTMDG- 109
+ + AKA G + + + A + + + + ++ + + + G
Sbjct: 193 LITMLCAKAAGACPLVITDIDEGRLKFA-KEICPEVVTHKVERLSAEESAKKIVESFGGI 251
Query: 110 ----IIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
++ + I +K GK+ ++G + +++P E
Sbjct: 252 EPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVRE 300
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-06
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 2 VADEHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVA 58
+ ++++P+ LD A L+ G+T L KPG +V + GG+GH+
Sbjct: 103 LYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIM 162
Query: 59 VKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQD 98
V +A+ +G TVI T ++ K+E +LG + QD
Sbjct: 163 VPWARHLG--ATVIGTVSTEEKAETARKLGCHHTINYSTQD 201
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-06
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
V E +V++ + + A L+ G+TV LR KPG + GG+G +A +
Sbjct: 100 VLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQ 159
Query: 61 FAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQD 98
+AKA+G +I T S K+ + LGA + +D
Sbjct: 160 WAKALG--AKLIGTVSSPEKAAHAKALGAWETIDYSHED 196
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-06
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 17/165 (10%)
Query: 3 ADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVK 60
+ P G ++ A + +T Y L Y PG + G +G A +
Sbjct: 127 PAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQ 186
Query: 61 FAKAMGVKV-TVISTSPSK--KSEAVERLGADSFLVSRDQDEMQAAM----------GTM 107
K + +VI P+ +++ LGA + + + G
Sbjct: 187 IGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA 246
Query: 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLL 151
++ V + L + G ++ G P+ +P +
Sbjct: 247 KLALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYI 290
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-06
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVK 60
+ +H +P L+ A + T Y L G +PG V + G GG+G A+
Sbjct: 1627 LLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIA 1686
Query: 61 FAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVSRDQD 98
A + G +V S K++ R L F SRD
Sbjct: 1687 IALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS 1727
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 5e-06
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 2 VADEHFVVRIPEGAP---LDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHV 57
++ + V+++P+G L A L +T S K G +V + GG+G +
Sbjct: 105 ISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLI 164
Query: 58 AVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQD 98
+ K G I+ + + K + + GA+ + + +D
Sbjct: 165 LNQLLKMKG--AHTIAVASTDEKLKIAKEYGAEYLINASKED 204
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 7e-06
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLGHVAV 59
VV IP+ + A A +T + + L PG V + GG+G AV
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAW-----HSLCEVGRLSPGERVLIHSATGGVGMAAV 56
Query: 60 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109
AK +G ++ + S +K+ E + RLG + SR D + DG
Sbjct: 57 SIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRSVDFADEILELTDG 105
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-05
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 6/94 (6%)
Query: 2 VADE-HFVVRIPE-----GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLG 55
+ E +V I G P TA + G+ + F G+ V V GLG +
Sbjct: 126 IHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVA 185
Query: 56 HVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD 89
K G K+ V + + S AV GAD
Sbjct: 186 KALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 219
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-05
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 18/105 (17%)
Query: 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLG 55
VAD V RIP G A + +T Y Y L +PG + V GG+G
Sbjct: 305 VADHRMVTRIPAGWSFARAASVPIVFLTAY-----YALVDLAGLRPGESLLVHSAAGGVG 359
Query: 56 HVAVKFAKAMGVKV--TVISTSPSKKSEAVERLGADSFLVSRDQD 98
A++ A+ +G +V T S K L + SR D
Sbjct: 360 MAAIQLARHLGAEVYATA---SEDKWQAV--ELSREHLASSRTCD 399
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 9e-05
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86
G + ++G G +G K G+KV +S S ++ +++
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSG-RERAGFDQV 182
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Length = 334 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 1e-04
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 28 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87
+ P F G D G +G++GLG +G K AK ++ ++ S ++K E L
Sbjct: 135 GVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR--ILYYSRTRKEEVERELN 192
Query: 88 A 88
A
Sbjct: 193 A 193
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ 101
G V V+GLG G + A+G V V + S + + E DE++
Sbjct: 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELK 210
Query: 102 AAMGTMDGIIDTVSA 116
+ +D I+T+ +
Sbjct: 211 EHVKDIDICINTIPS 225
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86
VG++G G LG + +A G + S S K VE
Sbjct: 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSR-KSWPGVESY 181
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 2e-04
Identities = 10/49 (20%), Positives = 20/49 (40%)
Query: 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF 91
G + + G G +G A A+G+ V ++T+ E + +
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTAT 185
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 3e-04
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 39 LDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ 97
L GM V VVG G + + K G + + + + E + GA +V+ +
Sbjct: 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE 75
Query: 98 DEMQAAMGTMDGIIDTVSA 116
++ A ++D ++ +
Sbjct: 76 EDFSHAFASIDAVVFAAGS 94
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 3e-04
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV 93
H V G L + G VTVIS P + +E+ D+ V
Sbjct: 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADV 53
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A Length = 393 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 4e-04
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF 91
+ + D MHVG V G +G ++ V + T + E+VE+ ++
Sbjct: 180 ADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVH--LHYTDRHRLPESVEKELNLTW 237
Query: 92 LVSRDQ 97
+R+
Sbjct: 238 HATRED 243
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A Length = 351 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 4e-04
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER-LGA 88
+ + + D G +G VG G +G + ++ K G ++ + + +E+ GA
Sbjct: 153 AGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN--LLYHDRLQMAPELEKETGA 208
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 8e-04
Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99
K G V V+G+G +G ++V A +G ++ + + + GA + ++ D
Sbjct: 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEYGATDIINYKNGDI 223
Query: 100 MQAAMGTMDGI-----IDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP 146
++ + DG + VH + ++K + + + +
Sbjct: 224 VEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNID 275
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 8e-04
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 34 LRFYGLDKP-GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD 89
+ GL G+ V V GLG +G A G ++ V T + + AV LG
Sbjct: 165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHT 220
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 173 | |||
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 99.95 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 99.95 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 99.95 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 99.95 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 99.95 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 99.94 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 99.94 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 99.94 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 99.94 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 99.94 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 99.94 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 99.94 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 99.94 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 99.94 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 99.93 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 99.93 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 99.93 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 99.93 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 99.93 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 99.93 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 99.93 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 99.93 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 99.93 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 99.93 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 99.93 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 99.93 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 99.93 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 99.93 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 99.93 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 99.93 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 99.93 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 99.92 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 99.92 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 99.92 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 99.92 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 99.92 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 99.92 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 99.92 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 99.92 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 99.92 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 99.92 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 99.92 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 99.92 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 99.92 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 99.91 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 99.91 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 99.91 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 99.91 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 99.91 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 99.91 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 99.91 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 99.91 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 99.91 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 99.91 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 99.91 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 99.91 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 99.91 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 99.91 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 99.91 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 99.91 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.9 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 99.89 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 99.89 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 99.89 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 99.89 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 99.88 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 99.88 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.88 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 99.88 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 99.88 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.83 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 99.33 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 99.3 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 99.28 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 99.21 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 99.18 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 99.02 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.99 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.98 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.96 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.96 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 98.94 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 98.92 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.88 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.81 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 98.79 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.78 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 98.78 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.74 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.67 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 98.57 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 98.56 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.55 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.46 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.45 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.45 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.44 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.44 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.44 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.44 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.42 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.4 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.4 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.4 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 98.4 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.39 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.39 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.38 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.38 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.38 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.38 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.38 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.37 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.37 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.37 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.37 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.36 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.36 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.34 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.34 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.33 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.33 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.33 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.32 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.32 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.32 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.31 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.31 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.3 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.3 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.3 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.3 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.29 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.29 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 98.29 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.29 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.28 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.27 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.27 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.27 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.27 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.27 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.26 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.26 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.26 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.26 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.26 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.25 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.25 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.24 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.24 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.24 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 98.24 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.23 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.23 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.23 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 98.22 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.22 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 98.22 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.22 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.22 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.22 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.21 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 98.21 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.21 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.21 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.21 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.2 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.2 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.19 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.19 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.19 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.19 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.19 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.19 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.18 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.18 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 98.18 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.18 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.18 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.18 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.17 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.17 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.17 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.17 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.17 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.17 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.17 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.17 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.17 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.16 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 98.16 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.16 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.15 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 98.15 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 98.15 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.15 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.15 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.15 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.15 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.14 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 98.14 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.14 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.14 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.14 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 98.14 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 98.14 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 98.13 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 98.13 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 98.13 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.13 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.13 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.13 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.12 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.12 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.12 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.12 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.11 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 98.11 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.11 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.11 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.11 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 98.1 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 98.1 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.1 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.1 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.1 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.1 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.1 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.1 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.1 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 98.09 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.09 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 98.09 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.08 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.08 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.08 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.08 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.08 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.08 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.08 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.08 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.08 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.08 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.07 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.07 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.07 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.07 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 98.06 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.06 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.06 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 98.06 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.06 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.06 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.05 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.04 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.04 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.04 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.04 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.04 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.04 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.04 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.04 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 98.04 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 98.03 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 98.03 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 98.03 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.03 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.03 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 98.02 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.02 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.02 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.02 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.02 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 98.02 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.01 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.01 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.01 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.01 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 98.01 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.01 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.01 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.01 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.01 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.0 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.0 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 98.0 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.0 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 97.99 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 97.99 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.98 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.98 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 97.98 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 97.98 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.98 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.98 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.98 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.98 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 97.98 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.98 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 97.98 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.97 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.97 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.97 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 97.96 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.96 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.96 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.96 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 97.96 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.95 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.95 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 97.95 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 97.94 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.94 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.94 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.93 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 97.93 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.93 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 97.92 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 97.92 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.92 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.92 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 97.92 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 97.92 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.92 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.92 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.91 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 97.91 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.91 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.91 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 97.91 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 97.91 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 97.91 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.91 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 97.9 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 97.9 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.9 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 97.9 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.9 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 97.9 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 97.9 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.89 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.89 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 97.89 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.89 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.89 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.88 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 97.88 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.88 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.88 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 97.88 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.88 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 97.87 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.87 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 97.87 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.87 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 97.87 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.87 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.86 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 97.86 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.85 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 97.85 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 97.85 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 97.85 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.84 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.84 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 97.84 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 97.84 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.84 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.84 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.84 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 97.83 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.83 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 97.83 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 97.82 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.82 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.82 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.81 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.81 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 97.81 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 97.81 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 97.81 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.8 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.8 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 97.8 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 97.8 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.8 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.8 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 97.79 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.79 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 97.78 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 97.78 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.77 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 97.77 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 97.77 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.77 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.77 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.76 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 97.76 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.75 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.75 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 97.75 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.75 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 97.75 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 97.73 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 97.73 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.73 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 97.73 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 97.72 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 97.72 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 97.72 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.72 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.72 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.72 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 97.71 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 97.71 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 97.71 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 97.7 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.7 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.7 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 97.69 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.69 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 97.69 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 97.67 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.66 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 97.66 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 97.65 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 97.64 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 97.64 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.64 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 97.63 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.62 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 97.62 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 97.61 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 97.61 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 97.61 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 97.61 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 97.61 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 97.6 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.6 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.6 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.6 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.6 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.6 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 97.6 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 97.59 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 97.59 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.58 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 97.58 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.57 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 97.57 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.57 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 97.56 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.56 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.55 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.55 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 97.55 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.55 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.54 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.54 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 97.53 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.53 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.52 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.52 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 97.52 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 97.52 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.52 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 97.51 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 97.51 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.5 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 97.49 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.49 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 97.49 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.49 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.49 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 97.49 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.48 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.48 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 97.48 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 97.48 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.48 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 97.47 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.47 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 97.47 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.47 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 97.46 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 97.46 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.46 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 97.46 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 97.46 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 97.45 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 97.45 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 97.45 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 97.45 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 97.45 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 97.45 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 97.45 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 97.44 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.44 |
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-28 Score=187.40 Aligned_cols=153 Identities=46% Similarity=0.750 Sum_probs=134.1
Q ss_pred ccccceeEECCCC-CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEG-APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++ ++++++|++++++.|||+++.+. .+++|++|||+|+|++|++++|+++..|++|+++++++++++
T Consensus 154 ~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~ 232 (369)
T 1uuf_A 154 VVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKRE 232 (369)
T ss_dssp EEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred EEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5688899999999 99999999999999999999886 569999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc-ccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~ 156 (173)
.+++ +|++.++|+.+.+..+++.+++|++||++|.+..++.++++++++|+++.+|...+.. .++...++.++.+
T Consensus 233 ~a~~-lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 308 (369)
T 1uuf_A 233 AAKA-LGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRA 308 (369)
T ss_dssp HHHH-HTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCE
T ss_pred HHHH-cCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcE
Confidence 9998 9999999998877766666799999999998867899999999999999999766544 5677777777776
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=183.11 Aligned_cols=154 Identities=74% Similarity=1.231 Sum_probs=137.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC-CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++|++++|++++++.|||+++.+... + +|++|+|+|+|++|++++|+++..|++|+++++++++++
T Consensus 147 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~-~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 225 (366)
T 1yqd_A 147 VANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL-DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKE 225 (366)
T ss_dssp EEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHH
T ss_pred EEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCc-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 56888999999999999999999999999999987654 6 999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+++++|++.++|+.+.+.+.+..+++|++||++|....+..++++++++|+++.+|...+...++...++.++.+
T Consensus 226 ~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 301 (366)
T 1yqd_A 226 EALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI 301 (366)
T ss_dssp HHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCE
T ss_pred HHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcE
Confidence 9885599999999988777777667999999999987668999999999999999998766566777777778776
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-28 Score=185.66 Aligned_cols=152 Identities=37% Similarity=0.561 Sum_probs=135.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|+++++++||++++++.|||+++.+ ..+++|++|||+|+|++|++++|+++.+|++|++++++++|++.
T Consensus 140 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~ 218 (360)
T 1piw_A 140 RVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED 218 (360)
T ss_dssp EEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred EEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 57889999999999999999999999999999988 45699999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCCh-HHHHHhcCCccEEEEcCCC--ccchHHHHHhhhcCCEEEEeCCCCCCc-ccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSA--VHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~-~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~ 156 (173)
+++ +|+++++++.+. +..+++.+++|++||++|. +..+..++++++++|+++.+|...+ . .++...++.++++
T Consensus 219 ~~~-lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~ 295 (360)
T 1piw_A 219 AMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVS 295 (360)
T ss_dssp HHH-HTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCE
T ss_pred HHH-cCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeE
Confidence 998 999999998766 6666666799999999998 5578899999999999999997665 4 5666777777776
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-28 Score=184.66 Aligned_cols=154 Identities=33% Similarity=0.572 Sum_probs=137.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|++++++++|++++++.|||+++... .+++|++|||+|+|++|++++|+++..|++|++++++++|++.
T Consensus 127 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 205 (340)
T 3s2e_A 127 VADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVT-DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNL 205 (340)
T ss_dssp EECTTTSEECCTTSCHHHHGGGGTHHHHHHHHHHTT-TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EechHHEEECCCCCCHHHhhcccchhHHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 578899999999999999999999999999999655 5599999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
+++ +|+++++|+.+.+..+.+ .+++|++||++|....++.++++++++|+++.+|...+..+++...++.++.++
T Consensus 206 ~~~-lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i 283 (340)
T 3s2e_A 206 ARR-LGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITI 283 (340)
T ss_dssp HHH-TTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEE
T ss_pred HHH-cCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEE
Confidence 988 999999999875544333 358999999999887899999999999999999987776777777888887763
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=184.50 Aligned_cols=153 Identities=50% Similarity=0.898 Sum_probs=134.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC-CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+... + +|++|+|+|+|++|++++|+++..|++|++++++++|++
T Consensus 140 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~ 218 (357)
T 2cf5_A 140 VVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL-KQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRE 218 (357)
T ss_dssp EEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHHHTST-TSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHH
T ss_pred EechhhEEECcCCCCHHHhhhhhhhHHHHHHHHHhcCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 57888999999999999999999999999999987654 7 999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcc-cCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE-LPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~ 156 (173)
.+++++|+++++++.+.+.+.+..+++|++||++|.+..++.++++++++|+++.+|...+... ++.. ++.++.+
T Consensus 219 ~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~ 294 (357)
T 2cf5_A 219 EALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKV 294 (357)
T ss_dssp HHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCE
T ss_pred HHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccE
Confidence 9884499999999988766666667999999999987678999999999999999997665443 5555 6666665
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=182.53 Aligned_cols=154 Identities=28% Similarity=0.364 Sum_probs=134.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+++..|++|++++++++|++.
T Consensus 149 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 228 (363)
T 3uog_A 149 VLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDR 228 (363)
T ss_dssp EEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence 57889999999999999999999999999999977777799999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCcc
Q 030694 82 AVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEE 155 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 155 (173)
+++ +|+++++|+...+..++ ..+ ++|++|||+|.. .+..++++++++|+++.+|...+. ..++...++.++.
T Consensus 229 ~~~-lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 306 (363)
T 3uog_A 229 AFA-LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSP 306 (363)
T ss_dssp HHH-HTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCC
T ss_pred HHH-cCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCc
Confidence 988 99999999553443333 332 899999999966 799999999999999999987653 5777788888887
Q ss_pred cc
Q 030694 156 ED 157 (173)
Q Consensus 156 ~~ 157 (173)
++
T Consensus 307 ~i 308 (363)
T 3uog_A 307 VV 308 (363)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-27 Score=182.61 Aligned_cols=155 Identities=40% Similarity=0.692 Sum_probs=133.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|+++++++||++++++.|||+++.+. .+++|++|||+|+|++|++++|+++..|++|++++++++|++.
T Consensus 137 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 215 (348)
T 3two_A 137 VVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQD 215 (348)
T ss_dssp EEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHH
T ss_pred EechhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 578899999999999999999999999999999876 5699999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcc-cCccccc-cCcccce
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLE-LPAFPLL-TGEEEDS 158 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~~~ 158 (173)
+++ +|+++++ .+.+. +..++|++||++|++..++.++++++++|+++.+|... +... ++...++ .++++
T Consensus 216 ~~~-lGa~~v~--~~~~~---~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~-- 287 (348)
T 3two_A 216 ALS-MGVKHFY--TDPKQ---CKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRK-- 287 (348)
T ss_dssp HHH-TTCSEEE--SSGGG---CCSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCE--
T ss_pred HHh-cCCCeec--CCHHH---HhcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeE--
Confidence 998 9999988 33332 23399999999999977999999999999999999876 5554 7777777 77776
Q ss_pred eeecccc
Q 030694 159 WWQSHWG 165 (173)
Q Consensus 159 ~~~~~~~ 165 (173)
+.+++..
T Consensus 288 i~g~~~~ 294 (348)
T 3two_A 288 VYGSLIG 294 (348)
T ss_dssp EEECCSC
T ss_pred EEEEecC
Confidence 4444433
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=178.36 Aligned_cols=154 Identities=23% Similarity=0.287 Sum_probs=133.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+...+++|++|||+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 150 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~ 229 (371)
T 1f8f_A 150 LSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLE 229 (371)
T ss_dssp EEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHH
T ss_pred EechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 567889999999999999999999999999999766677999999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~ 154 (173)
.+++ +|+++++++.+.++.+++ . +++|++||++|.+..+..++++++++|+++.+|...+ ...++...++.++
T Consensus 230 ~a~~-lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 308 (371)
T 1f8f_A 230 LAKQ-LGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGG 308 (371)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTT
T ss_pred HHHH-cCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCC
Confidence 9988 999999998765443333 2 3799999999987678999999999999999997653 3567777777777
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
.+
T Consensus 309 ~~ 310 (371)
T 1f8f_A 309 KT 310 (371)
T ss_dssp CE
T ss_pred CE
Confidence 75
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=177.22 Aligned_cols=153 Identities=22% Similarity=0.294 Sum_probs=134.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++|| ++.++.|||+++.... +++|++|||+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 144 ~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 221 (370)
T 4ej6_A 144 LVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGVDLSG-IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRR 221 (370)
T ss_dssp EEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred EEchhhEEECCCCCCHHHHh-hhhHHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 57889999999999999987 8889999999995544 5999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-------CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-------~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|++.++|+++.+..+.+. +++|++|||+|....++.++++++++|+++.+|...+ ..+++...++
T Consensus 222 ~a~~-lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~ 300 (370)
T 4ej6_A 222 LAEE-VGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDIL 300 (370)
T ss_dssp HHHH-HTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHH
T ss_pred HHHH-cCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHH
Confidence 9988 9999999988766554443 3899999999987679999999999999999997665 4678888888
Q ss_pred cCcccc
Q 030694 152 TGEEED 157 (173)
Q Consensus 152 ~~~~~~ 157 (173)
.++.++
T Consensus 301 ~~~~~i 306 (370)
T 4ej6_A 301 FRELRV 306 (370)
T ss_dssp HTTCEE
T ss_pred hCCcEE
Confidence 888873
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-26 Score=177.76 Aligned_cols=152 Identities=22% Similarity=0.322 Sum_probs=131.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++|+.+++++.|||+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 155 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 234 (376)
T 1e3i_A 155 VVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFP 234 (376)
T ss_dssp EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999999777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCCcccCccccccC
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
.+++ +|+++++|+.+ .+. +.+.. +++|++|||+|....+..++++++++ |+++.+|.......++...++.+
T Consensus 235 ~a~~-lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 313 (376)
T 1e3i_A 235 KAKA-LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG 313 (376)
T ss_dssp HHHH-TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTT
T ss_pred HHHH-hCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhcc
Confidence 9988 99999998764 222 22222 48999999999866789999999999 99999998544456676667666
Q ss_pred c
Q 030694 154 E 154 (173)
Q Consensus 154 ~ 154 (173)
+
T Consensus 314 ~ 314 (376)
T 1e3i_A 314 R 314 (376)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-27 Score=179.74 Aligned_cols=153 Identities=32% Similarity=0.571 Sum_probs=134.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|++++++++|++++++.|||+++.+. .+++|++|+|+|+|++|++++|+++..|++|+++++++++++.
T Consensus 125 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 203 (339)
T 1rjw_A 125 RAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL 203 (339)
T ss_dssp EEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred EechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 568889999999999999999999999999999887 5699999999999889999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|++.++|+.+.+..+++ .+++|++||++|....++.++++++++|+++.+|...+...++...++.++.+
T Consensus 204 ~~~-lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 280 (339)
T 1rjw_A 204 AKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK 280 (339)
T ss_dssp HHH-TTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCE
T ss_pred HHH-CCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcE
Confidence 988 999999988754433322 36899999999986678999999999999999998766566777777777776
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=178.02 Aligned_cols=158 Identities=25% Similarity=0.369 Sum_probs=134.1
Q ss_pred ccc-cceeEECCCCCCcccccchhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcch
Q 030694 2 VAD-EHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~-~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~ 78 (173)
++| ++.++++|+ ++++++|++++++.|||+++.+. ..+++|++|+|+|+|++|++++|+++.. |++|++++++++|
T Consensus 130 ~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~ 208 (345)
T 3jv7_A 130 IVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDR 208 (345)
T ss_dssp EESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHH
T ss_pred EecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 456 889999999 99999999999999999999884 4569999999999999999999999999 6799999999999
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcccccc
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
++.+++ +|+++++++.+ +..++ ..+ ++|++|||+|++..++.++++++++|+++.+|...+ ..+++. .++.
T Consensus 209 ~~~~~~-lGa~~~i~~~~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~ 285 (345)
T 3jv7_A 209 LALARE-VGADAAVKSGA-GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIP 285 (345)
T ss_dssp HHHHHH-TTCSEEEECST-THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSC
T ss_pred HHHHHH-cCCCEEEcCCC-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHh
Confidence 999998 99999999876 33333 322 899999999998779999999999999999998766 567775 6777
Q ss_pred Ccccceeeecccc
Q 030694 153 GEEEDSWWQSHWG 165 (173)
Q Consensus 153 ~~~~~~~~~~~~~ 165 (173)
++.+ +.+.++.
T Consensus 286 ~~~~--i~g~~~~ 296 (345)
T 3jv7_A 286 FGAS--VVTPYWG 296 (345)
T ss_dssp TTCE--EECCCSC
T ss_pred CCCE--EEEEecC
Confidence 7766 3344443
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=179.15 Aligned_cols=151 Identities=26% Similarity=0.437 Sum_probs=131.2
Q ss_pred ccccceeEECCCCCCccccc---chhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCc
Q 030694 2 VADEHFVVRIPEGAPLDATA---PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa---~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~ 76 (173)
++|++.++++|+++++++|| ++++++.|||+++.+. ..+++|++|||+|+|++|++++|+++.. |++|+++++++
T Consensus 142 ~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~ 221 (359)
T 1h2b_A 142 RTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE 221 (359)
T ss_dssp EECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 57889999999999999998 8999999999999885 5669999999999999999999999999 99999999999
Q ss_pred chHHHHHHHcCCCEEeeCCCh--HHHHHhc-C-CccEEEEcCCCcc--chHHHHHhhhcCCEEEEeCCCCCCcccCcccc
Q 030694 77 SKKSEAVERLGADSFLVSRDQ--DEMQAAM-G-TMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~-~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 150 (173)
+|++.+++ +|+++++|+++. +.+.++. + ++|++||++|++. .+..++++ ++|+++.+|...+. .++...+
T Consensus 222 ~~~~~~~~-lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~ 297 (359)
T 1h2b_A 222 EKLKLAER-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRV 297 (359)
T ss_dssp HHHHHHHH-TTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHH
T ss_pred HHHHHHHH-hCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHH
Confidence 99999998 999999998875 3333443 3 7999999999985 67888877 99999999976655 6777777
Q ss_pred ccCccc
Q 030694 151 LTGEEE 156 (173)
Q Consensus 151 ~~~~~~ 156 (173)
+.++.+
T Consensus 298 ~~~~~~ 303 (359)
T 1h2b_A 298 ISSEVS 303 (359)
T ss_dssp HHTTCE
T ss_pred HhCCcE
Confidence 777776
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=173.95 Aligned_cols=151 Identities=28% Similarity=0.395 Sum_probs=129.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++ +|++++++.|||+++.+...+++|++|||+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 152 ~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 230 (373)
T 1p0f_A 152 VVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFP 230 (373)
T ss_dssp EEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred EEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 56888999999999999 999999999999999777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|+++++|+.+ .+. +.+.. +++|++|||+|....+..++++++++ |+++.+|.... ...++...++
T Consensus 231 ~a~~-lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 309 (373)
T 1p0f_A 231 KAIE-LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL 309 (373)
T ss_dssp HHHH-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH
T ss_pred HHHH-cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhc
Confidence 9998 99999998763 223 33332 38999999999866789999999999 99999997653 3466666666
Q ss_pred cCc
Q 030694 152 TGE 154 (173)
Q Consensus 152 ~~~ 154 (173)
.+.
T Consensus 310 ~~~ 312 (373)
T 1p0f_A 310 TGR 312 (373)
T ss_dssp TTC
T ss_pred cCc
Confidence 665
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=178.28 Aligned_cols=152 Identities=26% Similarity=0.333 Sum_probs=134.0
Q ss_pred ccc-cceeEECCCCCCcccccchhhHHHHHHHHHHhh----CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeC
Q 030694 2 VAD-EHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY----GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVIST 74 (173)
Q Consensus 2 ~~~-~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~----~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~ 74 (173)
++| +++++++ ++++++++|++++++.|||+++.+. ..+ +|++|||+|+|++|++++|+++.. |++|+++++
T Consensus 127 ~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~ 204 (344)
T 2h6e_A 127 LVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR 204 (344)
T ss_dssp EESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred EecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 567 8999999 9999999999999999999999887 366 999999999999999999999999 999999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCC-hHHHHHhc-C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 75 SPSKKSEAVERLGADSFLVSRD-QDEMQAAM-G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+++|++.+++ +|+++++|+.+ .+...++. + ++|++||++|.+..+..++++++++|+++.+|...+...++...++
T Consensus 205 ~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~ 283 (344)
T 2h6e_A 205 SKKHRDFALE-LGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTA 283 (344)
T ss_dssp CHHHHHHHHH-HTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHH
T ss_pred CHHHHHHHHH-hCCCEEeccccchHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHh
Confidence 9999999988 99999998776 55555554 3 7999999999986789999999999999999987665667777777
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
.++.+
T Consensus 284 ~~~~~ 288 (344)
T 2h6e_A 284 VWNKK 288 (344)
T ss_dssp HTTCE
T ss_pred hCCcE
Confidence 77776
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=176.02 Aligned_cols=150 Identities=23% Similarity=0.349 Sum_probs=129.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 153 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~ 232 (378)
T 3uko_A 153 VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYE 232 (378)
T ss_dssp EEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred EechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 568889999999999999999999999999999877778999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCC--ChHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSR--DQDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~--~~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|+++++|+. +.+. +.++. +++|++|||+|.+..++.++++++++ |+++.+|.... ...++...++
T Consensus 233 ~a~~-lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T 3uko_A 233 TAKK-FGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV 311 (378)
T ss_dssp HHHT-TTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred HHHH-cCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh
Confidence 9988 9999999986 3333 33332 38999999999977789999999996 99999997653 3455555554
Q ss_pred c
Q 030694 152 T 152 (173)
Q Consensus 152 ~ 152 (173)
.
T Consensus 312 ~ 312 (378)
T 3uko_A 312 T 312 (378)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=174.11 Aligned_cols=152 Identities=24% Similarity=0.343 Sum_probs=130.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 152 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~ 231 (374)
T 1cdo_A 152 VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 231 (374)
T ss_dssp EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 467889999999999999999999999999999777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC-CcccCcccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
.+++ +|+++++|+.+ .+. +.+.. +++|++||++|....+..++++++++ |+++.+|...+ ...++...++.
T Consensus 232 ~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 310 (374)
T 1cdo_A 232 KAKV-FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA 310 (374)
T ss_dssp HHHH-TTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHT
T ss_pred HHHH-hCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhc
Confidence 9998 99999998763 222 22222 48999999999876789999999999 99999997654 45666666666
Q ss_pred Cc
Q 030694 153 GE 154 (173)
Q Consensus 153 ~~ 154 (173)
+.
T Consensus 311 ~~ 312 (374)
T 1cdo_A 311 GR 312 (374)
T ss_dssp TC
T ss_pred CC
Confidence 65
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=173.48 Aligned_cols=152 Identities=24% Similarity=0.371 Sum_probs=130.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 151 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~ 230 (374)
T 2jhf_A 151 VVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 230 (374)
T ss_dssp EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 568889999999999999999999999999999777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|+++++|+.+ .+. +.+.. +++|++||++|.+..+..++++++++ |+++.+|.... ...++...++
T Consensus 231 ~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 309 (374)
T 2jhf_A 231 KAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL 309 (374)
T ss_dssp HHHH-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred HHHH-hCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHh
Confidence 9988 99999998764 222 33332 38999999999876789999999999 99999997653 3466666666
Q ss_pred cCc
Q 030694 152 TGE 154 (173)
Q Consensus 152 ~~~ 154 (173)
.++
T Consensus 310 ~~~ 312 (374)
T 2jhf_A 310 SGR 312 (374)
T ss_dssp TTC
T ss_pred cCC
Confidence 666
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=173.76 Aligned_cols=152 Identities=24% Similarity=0.339 Sum_probs=130.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 150 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~ 229 (373)
T 2fzw_A 150 VVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 229 (373)
T ss_dssp EEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred EEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999999777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|+++++++.+ .+. +.+.. +++|++||++|....+..++++++++ |+++.+|.... ..+++...++
T Consensus 230 ~~~~-lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 308 (373)
T 2fzw_A 230 RAKE-FGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 308 (373)
T ss_dssp HHHH-HTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred HHHH-cCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHh
Confidence 9998 99999998764 222 33332 38999999999876789999999999 99999997653 3466666666
Q ss_pred cCc
Q 030694 152 TGE 154 (173)
Q Consensus 152 ~~~ 154 (173)
.++
T Consensus 309 ~~~ 311 (373)
T 2fzw_A 309 TGR 311 (373)
T ss_dssp TTC
T ss_pred cCC
Confidence 666
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-26 Score=173.24 Aligned_cols=153 Identities=22% Similarity=0.297 Sum_probs=127.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++
T Consensus 119 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 198 (342)
T 4eye_A 119 AVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE 198 (342)
T ss_dssp EECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred EEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999987777899999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|++.++++. .+..+++ .+ ++|++|||+|++ .+..++++++++|+++.+|...+. ..++...++.++
T Consensus 199 ~~~~-~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 275 (342)
T 4eye_A 199 FVKS-VGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRN 275 (342)
T ss_dssp HHHH-HTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTT
T ss_pred HHHh-cCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcC
Confidence 9998 9999999887 4443333 22 799999999998 689999999999999999976643 467777788888
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
.++
T Consensus 276 ~~i 278 (342)
T 4eye_A 276 ASL 278 (342)
T ss_dssp CEE
T ss_pred CEE
Confidence 763
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=175.00 Aligned_cols=153 Identities=22% Similarity=0.226 Sum_probs=135.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|++++++++|++
T Consensus 127 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 206 (353)
T 4dup_A 127 LLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE 206 (353)
T ss_dssp EEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred EEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999987777899999999976 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cc-cCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-LPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~ 154 (173)
.+++ +|++.++++.+.+..+.+. +++|++|||+|.. .+..++++++++|+++.+|...+. .. ++...++.++
T Consensus 207 ~~~~-lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 284 (353)
T 4dup_A 207 ACER-LGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKR 284 (353)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTT
T ss_pred HHHh-cCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcC
Confidence 9998 9999999988755443332 4899999999998 689999999999999999977653 33 7777888887
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
.+
T Consensus 285 ~~ 286 (353)
T 4dup_A 285 LT 286 (353)
T ss_dssp CE
T ss_pred ce
Confidence 76
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=177.20 Aligned_cols=163 Identities=26% Similarity=0.437 Sum_probs=140.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~ 80 (173)
.+|++.++++|+++++++++++++++.|||++++.... ++|++|+|+|+|++|.+++++++.. |++|++++++++|++
T Consensus 124 ~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~ 202 (348)
T 4eez_A 124 IVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLN 202 (348)
T ss_dssp EEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHH
T ss_pred cccccceeecCCCCCHHHHhhcccceeeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhh
Confidence 46788999999999999999999999999999987665 9999999999999999999999876 569999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++.++|+++.+..+++ .+ ++|.+++++++...+..++++++++|+++.+|.......++...++.+++
T Consensus 203 ~~~~-~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 281 (348)
T 4eez_A 203 LAKK-IGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGV 281 (348)
T ss_dssp HHHH-TTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCC
T ss_pred hhhh-cCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCe
Confidence 9998 999999999886655444 32 79999999999988999999999999999999877777888888888888
Q ss_pred cceeeeccccccC
Q 030694 156 EDSWWQSHWGVEG 168 (173)
Q Consensus 156 ~~~~~~~~~~~~~ 168 (173)
+ +.+++.+++.
T Consensus 282 ~--i~gs~~~~~~ 292 (348)
T 4eez_A 282 E--VAGSLVGTRL 292 (348)
T ss_dssp E--EEECCSCCHH
T ss_pred E--EEEEecCCHH
Confidence 7 4455555443
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=171.16 Aligned_cols=153 Identities=25% Similarity=0.248 Sum_probs=130.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++|+.+ ..+.|||+++... .+++|++|||+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 133 ~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 210 (356)
T 1pl8_A 133 KHNAAFCYKLPDNVTFEEGALI-EPLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS 210 (356)
T ss_dssp EEEGGGEEECCTTSCHHHHHHH-HHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred EeehHHEEECcCCCCHHHHHhh-chHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5788999999999999998754 6788999999554 45999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCC---ChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccC
Q 030694 81 EAVERLGADSFLVSR---DQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~---~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
.+++ +|++++++++ ..+..+++. +++|++||++|.+..+..++++++++|+++.+|.......++...++.+
T Consensus 211 ~a~~-lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 289 (356)
T 1pl8_A 211 KAKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 289 (356)
T ss_dssp HHHH-TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHT
T ss_pred HHHH-hCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhc
Confidence 9998 9999999987 244433332 4899999999998678999999999999999997555566777777777
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
++.+
T Consensus 290 ~~~i 293 (356)
T 1pl8_A 290 EVDI 293 (356)
T ss_dssp TCEE
T ss_pred ceEE
Confidence 7763
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=170.47 Aligned_cols=155 Identities=21% Similarity=0.252 Sum_probs=132.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC------CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK------PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
++|++.++++|+++++++|+.+++++.|||+++.+...++ +|++|+|+|+ |++|++++|+++..|++|+++++
T Consensus 104 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~ 183 (346)
T 3fbg_A 104 LINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS 183 (346)
T ss_dssp EEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 5788999999999999999999999999999998777777 8999999965 99999999999999999999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh--HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+++|++.+++ +|+++++++.+. +.+.+.. +++|++|||+|++..++.++++++++|+++.++... ..++...+.
T Consensus 184 ~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~ 260 (346)
T 3fbg_A 184 RNETIEWTKK-MGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALK 260 (346)
T ss_dssp SHHHHHHHHH-HTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGT
T ss_pred CHHHHHHHHh-cCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCcccccc
Confidence 9999999999 999999998752 2233332 389999999998866799999999999999988533 356666777
Q ss_pred cCccccee
Q 030694 152 TGEEEDSW 159 (173)
Q Consensus 152 ~~~~~~~~ 159 (173)
.++.++.+
T Consensus 261 ~~~~~~~~ 268 (346)
T 3fbg_A 261 PKSLSFSH 268 (346)
T ss_dssp TTTCEEEE
T ss_pred ccceEEEE
Confidence 77776433
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-26 Score=176.14 Aligned_cols=154 Identities=28% Similarity=0.393 Sum_probs=129.8
Q ss_pred cc-ccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC-CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch
Q 030694 2 VA-DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (173)
Q Consensus 2 ~~-~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~ 78 (173)
++ |++.++++|+++++++.|++..++.|||+++... . +++|++|||+|+|++|++++|+++..|+ +|++++++++|
T Consensus 154 ~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 232 (380)
T 1vj0_A 154 VLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEY-PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 232 (380)
T ss_dssp EECTTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHTC-SSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHH
T ss_pred EEcccceEEECCCCCChHHhHhhhcHHHHHHHHHHhc-CCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHH
Confidence 46 8899999999999993444555999999999654 5 6999999999999999999999999994 99999999999
Q ss_pred HHHHHHHcCCCEEeeCC---ChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-C-CcccCcc
Q 030694 79 KSEAVERLGADSFLVSR---DQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-K-PLELPAF 148 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~---~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~ 148 (173)
++.+++ +|+++++++. +.++.++ ..+ ++|++|||+|.+..+..++++++++|+++.+|... + ..+++..
T Consensus 233 ~~~~~~-lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~ 311 (380)
T 1vj0_A 233 LKLAEE-IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVY 311 (380)
T ss_dssp HHHHHH-TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHH
T ss_pred HHHHHH-cCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchH
Confidence 999998 9999999987 4443333 322 79999999998767899999999999999999776 5 5677777
Q ss_pred c-cccCcccc
Q 030694 149 P-LLTGEEED 157 (173)
Q Consensus 149 ~-~~~~~~~~ 157 (173)
. ++.+++++
T Consensus 312 ~~~~~~~~~i 321 (380)
T 1vj0_A 312 EWLVLKNATF 321 (380)
T ss_dssp HHTTTTTCEE
T ss_pred HHHHhCCeEE
Confidence 7 77787763
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=169.84 Aligned_cols=153 Identities=25% Similarity=0.268 Sum_probs=129.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|+++++++|+++++++|+.+ ..+.|||+++... .+++|++|||+|+|++|++++|+++.+|++|++++++++|++.
T Consensus 130 ~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 207 (352)
T 1e3j_A 130 VHAADFCHKLPDNVSLEEGALL-EPLSVGVHACRRA-GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEV 207 (352)
T ss_dssp EEEGGGEEECCTTSCHHHHHTH-HHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EeChHHeEECcCCCCHHHHHhh-chHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 5788999999999999998754 6788999999554 4599999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCC-hHH---HHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcccccc
Q 030694 82 AVERLGADSFLVSRD-QDE---MQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~-~~~---~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (173)
+++ +|+++++++++ .+. +.+.. +++|++||++|....++.++++++++|+++.+|...+..+++...++.
T Consensus 208 ~~~-lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 286 (352)
T 1e3j_A 208 AKN-CGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACA 286 (352)
T ss_dssp HHH-TTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHT
T ss_pred HHH-hCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHh
Confidence 988 99999999874 332 22222 479999999999867889999999999999999765556677777778
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
+++.+
T Consensus 287 ~~~~i 291 (352)
T 1e3j_A 287 REIDI 291 (352)
T ss_dssp TTCEE
T ss_pred cCcEE
Confidence 87764
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=171.17 Aligned_cols=150 Identities=25% Similarity=0.308 Sum_probs=132.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++++++.+.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|++++++++|++
T Consensus 100 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 179 (325)
T 3jyn_A 100 VLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA 179 (325)
T ss_dssp EEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred EecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999998888899999999996 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc-ccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 153 (173)
.+++ +|++.++|+.+.+..+++ . .++|++|||+|.. .+..++++++++|+++.+|...+.. .++...+..+
T Consensus 180 ~~~~-~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~ 256 (325)
T 3jyn_A 180 HAKA-LGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQK 256 (325)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHT
T ss_pred HHHH-cCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhc
Confidence 9998 999999998876544443 2 2799999999996 7899999999999999999876543 5777666666
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=168.35 Aligned_cols=151 Identities=27% Similarity=0.432 Sum_probs=129.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+.. +++|++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 86 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 164 (302)
T 1iz0_A 86 AVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA 164 (302)
T ss_dssp EEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH
T ss_pred EEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5788999999999999999999999999999998666 799999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCC-hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~ 157 (173)
.+++ +|+++++|+.+ .+..+++ +++|++|| +|+. .+..++++++++|+++.+|...+. ..++...++.++.++
T Consensus 165 ~~~~-~ga~~~~~~~~~~~~~~~~-~~~d~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T 1iz0_A 165 LPLA-LGAEEAATYAEVPERAKAW-GGLDLVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAV 239 (302)
T ss_dssp HHHH-TTCSEEEEGGGHHHHHHHT-TSEEEEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEE
T ss_pred HHHh-cCCCEEEECCcchhHHHHh-cCceEEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeE
Confidence 9988 99999999876 6655555 78999999 9985 789999999999999999976543 356666677777653
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=172.18 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=123.9
Q ss_pred ccccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch
Q 030694 2 VADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~ 78 (173)
++|++ .++++|+++++++++.+++++.|||+++.. ..+++|++|+|+|+|++|++++|+++..|+ +|++++++++|
T Consensus 125 ~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~ 203 (352)
T 3fpc_A 125 HVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHC 203 (352)
T ss_dssp EESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHHHH-TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHH
T ss_pred EeccccCeEEECCCCCCHHHHhhccchhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHH
Confidence 35654 899999999999999999999999999955 455999999999999999999999999999 89999999999
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA 147 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 147 (173)
++.+++ +|+++++|+++.+..+++ .+ ++|++||++|++..++.++++++++|+++.+|...+...++.
T Consensus 204 ~~~~~~-lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~ 276 (352)
T 3fpc_A 204 CDIALE-YGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDI 276 (352)
T ss_dssp HHHHHH-HTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEE
T ss_pred HHHHHH-hCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceec
Confidence 999998 999999998765544433 32 799999999997679999999999999999997664433333
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=170.92 Aligned_cols=152 Identities=19% Similarity=0.236 Sum_probs=130.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC-----CCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-----PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~g~~vlI~G~-g~~G~~a~~~~~~-~g~~v~~~~~ 74 (173)
++|++.++++|+++++++||++++++.|||+++.+...++ +|++|||+|+ |++|++++|+++. .|++|+++++
T Consensus 126 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~ 205 (363)
T 4dvj_A 126 LVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205 (363)
T ss_dssp EEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS
T ss_pred EeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC
Confidence 5688899999999999999999999999999998777777 8999999995 9999999999998 5889999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcccc
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 150 (173)
+++|++.+++ +|+++++|+.+ +..+++. +++|++|||+|++..++.++++++++|+++.+|.. ..++...+
T Consensus 206 ~~~~~~~~~~-lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~ 280 (363)
T 4dvj_A 206 RPETQEWVKS-LGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLF 280 (363)
T ss_dssp SHHHHHHHHH-TTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGG
T ss_pred CHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHH
Confidence 9999999998 99999999875 3333332 38999999999886789999999999999999742 35667777
Q ss_pred ccCcccce
Q 030694 151 LTGEEEDS 158 (173)
Q Consensus 151 ~~~~~~~~ 158 (173)
..++.++.
T Consensus 281 ~~k~~~i~ 288 (363)
T 4dvj_A 281 KRKAVSIH 288 (363)
T ss_dssp TTTTCEEE
T ss_pred hhccceEE
Confidence 77777643
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=168.73 Aligned_cols=154 Identities=19% Similarity=0.194 Sum_probs=135.0
Q ss_pred ccc-cceeEECCCCCCccc---ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VAD-EHFVVRIPEGAPLDA---TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~-~~~~~~~p~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++| ++.++++|+++++++ ++++++.+.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|+++++++
T Consensus 104 ~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 183 (334)
T 3qwb_A 104 KISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183 (334)
T ss_dssp EEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456 889999999999999 88999999999999998878899999999996 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCcccc
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPL 150 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~ 150 (173)
+|++.+++ +|++.++++.+.+..+++ . .++|++|||+|.. .+..++++++++|+++.+|...+. ..++...+
T Consensus 184 ~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 261 (334)
T 3qwb_A 184 EKLKIAKE-YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRL 261 (334)
T ss_dssp HHHHHHHH-TTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGG
T ss_pred HHHHHHHH-cCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhh
Confidence 99999988 999999998876544443 2 2799999999986 799999999999999999987654 36777777
Q ss_pred ccCcccc
Q 030694 151 LTGEEED 157 (173)
Q Consensus 151 ~~~~~~~ 157 (173)
..++...
T Consensus 262 ~~~~~~~ 268 (334)
T 3qwb_A 262 SPKNITL 268 (334)
T ss_dssp TTTTCEE
T ss_pred hhCceEE
Confidence 7777753
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=170.18 Aligned_cols=153 Identities=24% Similarity=0.268 Sum_probs=132.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||++++++.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 122 ~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 201 (354)
T 2j8z_A 122 TVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ 201 (354)
T ss_dssp EEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred EeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999977777799999999996 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCc-cccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPA-FPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~ 153 (173)
.+++ +|++.++|+.+.+..+++ . +++|++|||+|++ .+..++++++++|+++.+|...+. ..++. ..++.+
T Consensus 202 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 279 (354)
T 2j8z_A 202 MAEK-LGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFK 279 (354)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHT
T ss_pred HHHH-cCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhC
Confidence 9977 999999998775544333 2 3799999999998 689999999999999999976543 45666 666777
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+.+
T Consensus 280 ~~~ 282 (354)
T 2j8z_A 280 RGS 282 (354)
T ss_dssp TCE
T ss_pred CCE
Confidence 665
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=170.90 Aligned_cols=153 Identities=21% Similarity=0.218 Sum_probs=132.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++++++++.|||+++.+...++++++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 126 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~ 205 (343)
T 2eih_A 126 VLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR 205 (343)
T ss_dssp EEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred EeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 56888999999999999999999999999999988767799999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|++.++|+.+.+..++ .. +++|++||++|.. .+..++++++++|+++.+|...+. ..++...++.++
T Consensus 206 ~~~~-~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 283 (343)
T 2eih_A 206 RAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQ 283 (343)
T ss_dssp HHHH-HTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSCSS-SHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTT
T ss_pred HHHh-cCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCC
Confidence 9987 99998998876544333 32 3799999999954 789999999999999999976653 346777777777
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
++
T Consensus 284 ~~ 285 (343)
T 2eih_A 284 LS 285 (343)
T ss_dssp CE
T ss_pred cE
Confidence 76
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=169.62 Aligned_cols=151 Identities=19% Similarity=0.210 Sum_probs=129.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||.++ .+.|||+++. ...+ +|++|+|+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 130 ~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l~-~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 206 (348)
T 2d8a_A 130 VVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTVL-AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRE 206 (348)
T ss_dssp EEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHHT-TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred EeChHHeEECCCCCCHHHHHhhh-HHHHHHHHHH-hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 57889999999999999998775 7789999994 4566 99999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc-cccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~ 154 (173)
.+++ +|+++++|+.+.+..+++ .+ ++|++||++|....+..++++++++|+++.+|...+...++. ..++.++
T Consensus 207 ~~~~-~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 285 (348)
T 2d8a_A 207 LAKK-VGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKA 285 (348)
T ss_dssp HHHH-HTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTT
T ss_pred HHHH-hCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCC
Confidence 9988 999999998765443333 22 799999999996678999999999999999998766566777 6777777
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
++
T Consensus 286 ~~ 287 (348)
T 2d8a_A 286 LT 287 (348)
T ss_dssp CE
T ss_pred cE
Confidence 76
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-26 Score=172.88 Aligned_cols=154 Identities=23% Similarity=0.286 Sum_probs=130.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCC--CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKP--GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~--g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++|++.++++|+++++++||++++++.|||+++... ..+++ ++ |||+|+ |++|++++|+++..|++|+++++++
T Consensus 103 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~ 181 (324)
T 3nx4_A 103 RVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRE 181 (324)
T ss_dssp EECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred ecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578899999999999999999999999999988532 33455 45 999998 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
+|++.+++ +|+++++|+.+.+..+++. +++|++|||+|++ .++.++++++++|+++.+|...+. .+++...++.++
T Consensus 182 ~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 259 (324)
T 3nx4_A 182 STHGYLKS-LGANRILSRDEFAESRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRN 259 (324)
T ss_dssp GGHHHHHH-HTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHC
T ss_pred HHHHHHHh-cCCCEEEecCCHHHHHhhcCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcC
Confidence 99999998 9999999987644322222 3899999999998 799999999999999999977653 567777777777
Q ss_pred ccce
Q 030694 155 EEDS 158 (173)
Q Consensus 155 ~~~~ 158 (173)
.++.
T Consensus 260 ~~~~ 263 (324)
T 3nx4_A 260 VRLQ 263 (324)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 7643
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=170.36 Aligned_cols=153 Identities=24% Similarity=0.345 Sum_probs=132.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+...++++++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 130 ~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 209 (351)
T 1yb5_A 130 LAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK 209 (351)
T ss_dssp EEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred EECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence 57889999999999999999999999999999987777799999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++.++|+.+.+..+++ . +++|++|||+|+. .+..++++++++|+++.+|.. +...++...++.++.
T Consensus 210 ~~~~-~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~ 286 (351)
T 1yb5_A 210 IVLQ-NGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKES 286 (351)
T ss_dssp HHHH-TTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTC
T ss_pred HHHH-cCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCc
Confidence 8887 999999998775544433 2 2799999999987 688999999999999999964 345677777777776
Q ss_pred cc
Q 030694 156 ED 157 (173)
Q Consensus 156 ~~ 157 (173)
++
T Consensus 287 ~i 288 (351)
T 1yb5_A 287 SI 288 (351)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=170.55 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=132.6
Q ss_pred ccccceeEECCCCCCc------ccccchhhHHHHHHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEe
Q 030694 2 VADEHFVVRIPEGAPL------DATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIS 73 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~------~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~ 73 (173)
++|++.++++|+.++. .++++++.++.|||+++.... .+++|++|||+|+|++|++++|+++..|+ +|++++
T Consensus 166 ~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp EEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 5788899999998864 447899999999999997543 67999999999999999999999999999 999999
Q ss_pred CCcchHHHHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCc-cchHHHHHhh----hcCCEEEEeCCCCCCc
Q 030694 74 TSPSKKSEAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAV-HPLMPLIGLL----KSQGKLVLLGAPEKPL 143 (173)
Q Consensus 74 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~ 143 (173)
++++|++.+++ +|+++++|+.+.+..+++ .+ ++|++|||+|++ ..+..+++++ +++|+++.+|...+..
T Consensus 246 ~~~~~~~~~~~-lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~ 324 (404)
T 3ip1_A 246 PSEVRRNLAKE-LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKI 324 (404)
T ss_dssp SCHHHHHHHHH-HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCE
T ss_pred CCHHHHHHHHH-cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCC
Confidence 99999999998 999999998776544433 32 799999999998 3466777777 9999999999887777
Q ss_pred ccCccccccCcccc
Q 030694 144 ELPAFPLLTGEEED 157 (173)
Q Consensus 144 ~~~~~~~~~~~~~~ 157 (173)
+++...++.++.++
T Consensus 325 ~~~~~~~~~~~~~i 338 (404)
T 3ip1_A 325 PLTGEVFQVRRAQI 338 (404)
T ss_dssp EECHHHHHHTTCEE
T ss_pred cccHHHHhccceEE
Confidence 88888888888863
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=177.34 Aligned_cols=160 Identities=18% Similarity=0.211 Sum_probs=135.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|+++++++|+++++++||.+++++.|||+++... ..+++|++|+|+|+ |++|++++|+++..|++|++++++++|
T Consensus 186 ~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~ 265 (456)
T 3krt_A 186 LVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQK 265 (456)
T ss_dssp EEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred EechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 578899999999999999999999999999999754 56799999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCCh--------------------HHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 79 KSEAVERLGADSFLVSRDQ--------------------DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~--------------------~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++.+++ +|++.++++.+. +.+.++. .++|++|||+|+. .+..++++++++|+++.+
T Consensus 266 ~~~~~~-lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 266 AEICRA-MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHH-HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHEEEEEEEEES
T ss_pred HHHHHh-hCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHhhCCcEEEEE
Confidence 999988 999999998763 2333333 3899999999995 799999999999999999
Q ss_pred CCCCC-CcccCccccccCcccceeeecccc
Q 030694 137 GAPEK-PLELPAFPLLTGEEEDSWWQSHWG 165 (173)
Q Consensus 137 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 165 (173)
|...+ ...++...++.+..+ +.+++..
T Consensus 344 G~~~~~~~~~~~~~~~~~~~~--i~g~~~~ 371 (456)
T 3krt_A 344 ASTSGYMHEYDNRYLWMSLKR--IIGSHFA 371 (456)
T ss_dssp CCTTCSEEEEEHHHHHHTTCE--EEECCSC
T ss_pred ecCCCcccccCHHHHHhcCeE--EEEeccC
Confidence 97765 346666667776665 4444433
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-25 Score=168.15 Aligned_cols=155 Identities=23% Similarity=0.252 Sum_probs=132.2
Q ss_pred ccccceeEECCCCCCcccc--cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|++.++++|+++++.++ +++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++
T Consensus 107 ~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~ 186 (336)
T 4b7c_A 107 IGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEK 186 (336)
T ss_dssp EECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred EechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 5788999999999987776 7899999999999977777899999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC----C---cccCc
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK----P---LELPA 147 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~ 147 (173)
++.+.+++|++.++|+.+.+..+.+. +++|++|||+|+. .+..++++++++|+++.+|...+ . ..++.
T Consensus 187 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 265 (336)
T 4b7c_A 187 CRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANY 265 (336)
T ss_dssp HHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTT
T ss_pred HHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhH
Confidence 99994449999999988765444332 3799999999986 68999999999999999997552 1 35666
Q ss_pred cccccCcccc
Q 030694 148 FPLLTGEEED 157 (173)
Q Consensus 148 ~~~~~~~~~~ 157 (173)
..++.++.++
T Consensus 266 ~~~~~~~~~i 275 (336)
T 4b7c_A 266 LSLLVNRARM 275 (336)
T ss_dssp THHHHTTCEE
T ss_pred HHHHhCCcEE
Confidence 6777777763
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=165.84 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=120.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh-CCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCe
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLD-----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVK 68 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~-~~~-----------~~g~~vlI~G~-g~~G~~a~~~~~~~g~~ 68 (173)
++|++.++++|+++++++|+.+++++.|||+++.+. ..+ ++|++|+|+|+ |++|++++|+++..|++
T Consensus 112 ~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~ 191 (371)
T 3gqv_A 112 VTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYI 191 (371)
T ss_dssp ECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCE
T ss_pred EEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCE
Confidence 578899999999999999999999999999999776 432 88999999999 99999999999999999
Q ss_pred EEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhh-hcCCEEEEeCCCC
Q 030694 69 VTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPE 140 (173)
Q Consensus 69 v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~ 140 (173)
|+++. +++|++.+++ +|+++++|+.+.+..+++. +++|++|||+|++..+..+++++ +++|+++.+|...
T Consensus 192 Vi~~~-~~~~~~~~~~-lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 266 (371)
T 3gqv_A 192 PIATC-SPHNFDLAKS-RGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFP 266 (371)
T ss_dssp EEEEE-CGGGHHHHHH-TTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCC
T ss_pred EEEEe-CHHHHHHHHH-cCCcEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCc
Confidence 99887 7889998888 9999999998766544432 37999999999976789999999 5999999999654
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=167.55 Aligned_cols=153 Identities=12% Similarity=0.135 Sum_probs=128.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCC-CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
++|++.++++|+++++++||++++.++|||+++.... +++ ++++|+|+ |++|++++|+++..|++|++++++++|+
T Consensus 125 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~ 202 (349)
T 3pi7_A 125 VAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI 202 (349)
T ss_dssp EEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH
T ss_pred eechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5788999999999999999999999999997776655 445 78999866 9999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCc-ccccc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPA-FPLLT 152 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~ 152 (173)
+.+++ +|+++++|+++.+..+.+. .++|++|||+|++ .+..++++++++|+++.+|...+ ...++. ..++.
T Consensus 203 ~~~~~-~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 280 (349)
T 3pi7_A 203 ALLKD-IGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIF 280 (349)
T ss_dssp HHHHH-HTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHH
T ss_pred HHHHH-cCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhc
Confidence 99998 9999999998766544443 2899999999998 47899999999999999996554 456777 77777
Q ss_pred Ccccce
Q 030694 153 GEEEDS 158 (173)
Q Consensus 153 ~~~~~~ 158 (173)
+++++.
T Consensus 281 ~~~~i~ 286 (349)
T 3pi7_A 281 QHKHIE 286 (349)
T ss_dssp SCCEEE
T ss_pred cccEEE
Confidence 877643
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=166.54 Aligned_cols=154 Identities=19% Similarity=0.246 Sum_probs=127.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHh--hCCCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|++.++++|+++++++|+.+++++.|||.++.. ...+++++ +|+|+|+ |++|++++|+++..|++|++++++++
T Consensus 106 ~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~ 185 (328)
T 1xa0_A 106 RLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 185 (328)
T ss_dssp EECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred EechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 57889999999999999999999999999988753 24568886 9999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
|++.+++ +|+++++|+.+.+ ...++. +++|++|||+|+. .+..++++++++|+++.+|...+ ...++...++.+
T Consensus 186 ~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~ 263 (328)
T 1xa0_A 186 EHDYLRV-LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILR 263 (328)
T ss_dssp CHHHHHH-TTCSEEEECC---------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHT
T ss_pred HHHHHHH-cCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhc
Confidence 9999988 9999999987542 223333 3799999999997 79999999999999999997654 345666667777
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
+.++
T Consensus 264 ~~~i 267 (328)
T 1xa0_A 264 GVSL 267 (328)
T ss_dssp TCEE
T ss_pred CceE
Confidence 7764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=171.83 Aligned_cols=150 Identities=19% Similarity=0.216 Sum_probs=127.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCC------CEEEEEcCChHHHHH-HHHH-HHCCCe-EEEE
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPG------MHVGVVGLGGLGHVA-VKFA-KAMGVK-VTVI 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g------~~vlI~G~g~~G~~a-~~~~-~~~g~~-v~~~ 72 (173)
++|++.++++|++++ + +|+++.++.|||+++... .+++| ++|+|+|+|++|+++ +|++ +.+|++ |+++
T Consensus 129 ~v~~~~~~~iP~~~~-~-~aal~~~~~ta~~al~~~-~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~ 205 (357)
T 2b5w_A 129 TSPEKYLVRIPRSQA-E-LGFLIEPISITEKALEHA-YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCL 205 (357)
T ss_dssp EEEGGGEEECCGGGS-T-TGGGHHHHHHHHHHHHHH-HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred EEchHHeEECCCCcc-h-hhhhhchHHHHHHHHHhc-CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEE
Confidence 578899999999999 5 466889999999999654 45889 999999999999999 9999 999997 9999
Q ss_pred eCCcc---hHHHHHHHcCCCEEeeCCChHH--HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccC
Q 030694 73 STSPS---KKSEAVERLGADSFLVSRDQDE--MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELP 146 (173)
Q Consensus 73 ~~~~~---~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 146 (173)
+++++ |++.+++ +|++++ |+.+.++ +.+..+++|++||++|.+..+..++++++++|+++.+|... ...+++
T Consensus 206 ~~~~~~~~~~~~~~~-lGa~~v-~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~ 283 (357)
T 2b5w_A 206 GRRDRPDPTIDIIEE-LDATYV-DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVD 283 (357)
T ss_dssp ECCCSSCHHHHHHHH-TTCEEE-ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCC
T ss_pred eCCcccHHHHHHHHH-cCCccc-CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceec
Confidence 99999 9999988 999988 8875432 33333489999999999767899999999999999999776 555677
Q ss_pred cccc----ccCccc
Q 030694 147 AFPL----LTGEEE 156 (173)
Q Consensus 147 ~~~~----~~~~~~ 156 (173)
...+ +.++++
T Consensus 284 ~~~~~~~~~~~~~~ 297 (357)
T 2b5w_A 284 AGAFHREMVLHNKA 297 (357)
T ss_dssp HHHHHHHHHHTTCE
T ss_pred HHHHhHHHHhCCeE
Confidence 7666 677765
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=168.40 Aligned_cols=131 Identities=18% Similarity=0.271 Sum_probs=110.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|++++++++|++++++.|||+++ +...+++|++|||+|+|++|++++|+++..|++|++++ +++|++.
T Consensus 103 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~ 180 (315)
T 3goh_A 103 VLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQAL 180 (315)
T ss_dssp EEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHH
T ss_pred EEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHH
Confidence 578899999999999999999999999999999 66777999999999999999999999999999999999 8999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++ +|++++++ + .+++.+++|++|||+|++. ...++++++++|+++.+|....
T Consensus 181 ~~~-lGa~~v~~--d---~~~v~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 233 (315)
T 3goh_A 181 AAK-RGVRHLYR--E---PSQVTQKYFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIP 233 (315)
T ss_dssp HHH-HTEEEEES--S---GGGCCSCEEEEECC--------TTGGGEEEEEEEEEECCC--
T ss_pred HHH-cCCCEEEc--C---HHHhCCCccEEEECCCchh-HHHHHHHhcCCCEEEEEeCCCC
Confidence 988 99998884 2 3334559999999999984 6889999999999999986543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=168.57 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=125.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|++.++++|+ +++++||.+ ..+.|||+++.... +++|++|||+|+|++|++++|+++..|++ |++++++++|++
T Consensus 142 ~v~~~~~~~iP~-~s~~~aa~~-~~~~ta~~~l~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 218 (363)
T 3m6i_A 142 NHPAVWCHKIGN-MSYENGAML-EPLSVALAGLQRAG-VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLK 218 (363)
T ss_dssp EEEGGGEEECTT-CCHHHHHHH-HHHHHHHHHHHHHT-CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred EEehhhEEECCC-CCHHHHHhh-hHHHHHHHHHHHcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 578899999999 999999877 57889999996554 59999999999999999999999999996 999999999999
Q ss_pred HHHHHcCCCEEeeCC-----ChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcccc
Q 030694 81 EAVERLGADSFLVSR-----DQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL 150 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~-----~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 150 (173)
.+++ + ++.++++. ..++.+++ . .++|++|||+|++..+..++++++++|+++.+|...+...++...+
T Consensus 219 ~a~~-l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~ 296 (363)
T 3m6i_A 219 FAKE-I-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRA 296 (363)
T ss_dssp HHHH-H-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHH
T ss_pred HHHH-h-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHH
Confidence 9998 7 54444442 23333333 2 2899999999998678999999999999999998776667787788
Q ss_pred ccCcccc
Q 030694 151 LTGEEED 157 (173)
Q Consensus 151 ~~~~~~~ 157 (173)
+.+++.+
T Consensus 297 ~~~~~~i 303 (363)
T 3m6i_A 297 SVREVDL 303 (363)
T ss_dssp HHHTCEE
T ss_pred HhcCcEE
Confidence 8887763
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=164.83 Aligned_cols=151 Identities=22% Similarity=0.285 Sum_probs=131.0
Q ss_pred ccccceeEECCCCCCccc--ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDA--TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|++.++++|+++++++ +|++++++.|||+++.+...++++++|+|+|+ |++|++++|+++..|++|+++++++++
T Consensus 103 ~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~ 182 (333)
T 1wly_A 103 LYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK 182 (333)
T ss_dssp EEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred EecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 578889999999999999 99999999999999987777799999999997 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcc-ccc
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF-PLL 151 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~ 151 (173)
++.+++ +|++.++|+++.+..+++ . .++|++|||+|+. .++.++++++++|+++.+|...+ ...++.. .++
T Consensus 183 ~~~~~~-~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~ 260 (333)
T 1wly_A 183 AETARK-LGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLG 260 (333)
T ss_dssp HHHHHH-HTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTT-THHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTT
T ss_pred HHHHHH-cCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHH-HHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhh
Confidence 999988 999999988765443332 2 3799999999995 78999999999999999997654 3456666 666
Q ss_pred cCc
Q 030694 152 TGE 154 (173)
Q Consensus 152 ~~~ 154 (173)
.++
T Consensus 261 ~~~ 263 (333)
T 1wly_A 261 VRG 263 (333)
T ss_dssp TTT
T ss_pred hcC
Confidence 776
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=164.45 Aligned_cols=153 Identities=21% Similarity=0.218 Sum_probs=131.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||++++++.|||+++.+...++++++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 100 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~ 179 (327)
T 1qor_A 100 NIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179 (327)
T ss_dssp EEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred EecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999987777799999999996 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccC-
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTG- 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~- 153 (173)
.+++ +|++.++|+.+.+..+++ . .++|++|||+|.. .+..++++++++|+++.+|...+. ..++...++.+
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 257 (327)
T 1qor_A 180 SALK-AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKG 257 (327)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTT
T ss_pred HHHH-cCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhcc
Confidence 9988 999999988765544333 2 2799999999954 789999999999999999976543 35666666666
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 258 ~~~ 260 (327)
T 1qor_A 258 SLY 260 (327)
T ss_dssp SCE
T ss_pred ceE
Confidence 443
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=168.20 Aligned_cols=154 Identities=16% Similarity=0.252 Sum_probs=128.4
Q ss_pred ccccceeEECCC-----------CCCcccccchhhHHHHHHHHHHhhCCCCCC-CEEEEEcC-ChHHHHHHHHHHHCCCe
Q 030694 2 VADEHFVVRIPE-----------GAPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVK 68 (173)
Q Consensus 2 ~~~~~~~~~~p~-----------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlI~G~-g~~G~~a~~~~~~~g~~ 68 (173)
++|++.++++|+ ++++++||++++++.|||+++.+...+++| ++|+|+|+ |++|++++|+++..|++
T Consensus 115 ~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~ 194 (364)
T 1gu7_A 115 LGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN 194 (364)
T ss_dssp EEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE
T ss_pred ecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCE
Confidence 578889999998 899999999999999999999887777999 99999998 99999999999999999
Q ss_pred EEEEeCCcch----HHHHHHHcCCCEEeeCCC---hHH---HHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEE
Q 030694 69 VTVISTSPSK----KSEAVERLGADSFLVSRD---QDE---MQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 134 (173)
Q Consensus 69 v~~~~~~~~~----~~~~~~~~g~~~v~~~~~---~~~---~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 134 (173)
|++++++.++ ++.+++ +|+++++++.+ .++ +.+.. +++|++|||+|+.. ...++++++++|+++
T Consensus 195 vi~~~~~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v 272 (364)
T 1gu7_A 195 SISVIRDRPNLDEVVASLKE-LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLML 272 (364)
T ss_dssp EEEEECCCTTHHHHHHHHHH-HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEE
T ss_pred EEEEecCccccHHHHHHHHh-cCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEE
Confidence 9999877665 566766 99999998764 332 33332 38999999999985 458899999999999
Q ss_pred EeCCCCC-CcccCccccccCcccc
Q 030694 135 LLGAPEK-PLELPAFPLLTGEEED 157 (173)
Q Consensus 135 ~~g~~~~-~~~~~~~~~~~~~~~~ 157 (173)
.+|...+ ...++...++.++.++
T Consensus 273 ~~g~~~~~~~~~~~~~~~~~~~~~ 296 (364)
T 1gu7_A 273 TYGGMSFQPVTIPTSLYIFKNFTS 296 (364)
T ss_dssp ECCCCSSCCEEECHHHHHHSCCEE
T ss_pred EecCCCCCCcccCHHHHhhcCcEE
Confidence 9997653 4567776777777763
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=166.18 Aligned_cols=148 Identities=22% Similarity=0.206 Sum_probs=125.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++.+++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++ .++++++
T Consensus 110 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~ 188 (343)
T 3gaz_A 110 AVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE 188 (343)
T ss_dssp EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred EecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence 57889999999999999999999999999999977777799999999996 999999999999999999999 8888999
Q ss_pred HHHHHcCCCEEeeCCChHHH---HHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEM---QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~---~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++. ++ ...+.. .+.. .++|++|||+|++ .+..++++++++|+++.+|... .++...+..++.
T Consensus 189 ~~~~-lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~ 261 (343)
T 3gaz_A 189 YVRD-LGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQA 261 (343)
T ss_dssp HHHH-HTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTC
T ss_pred HHHH-cCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCc
Confidence 9988 99988 67 443332 2222 3899999999987 6899999999999999998654 345666667776
Q ss_pred cc
Q 030694 156 ED 157 (173)
Q Consensus 156 ~~ 157 (173)
..
T Consensus 262 ~~ 263 (343)
T 3gaz_A 262 TY 263 (343)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=166.41 Aligned_cols=152 Identities=17% Similarity=0.182 Sum_probs=129.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++|+.+ ..+.|||+++.....+ +|++|+|+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 126 ~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 203 (343)
T 2dq4_A 126 VVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLA 203 (343)
T ss_dssp EEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred EEchHHeEECCCCCCHHHHHhh-hHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5688999999999999998876 5677999999745666 99999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc-cccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~ 155 (173)
.+++ + +++++++.+.+..+.+ .+++|++||++|....++.++++++++|+++.+|...+...++. ..++.++.
T Consensus 204 ~~~~-l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 281 (343)
T 2dq4_A 204 FARP-Y-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGI 281 (343)
T ss_dssp GGTT-T-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTC
T ss_pred HHHH-h-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCce
Confidence 9988 8 9999998765443333 24899999999996578999999999999999998666667777 77777777
Q ss_pred cc
Q 030694 156 ED 157 (173)
Q Consensus 156 ~~ 157 (173)
++
T Consensus 282 ~i 283 (343)
T 2dq4_A 282 TA 283 (343)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=166.86 Aligned_cols=154 Identities=21% Similarity=0.284 Sum_probs=125.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc---
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--- 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~--- 77 (173)
++|++.++++|+++++++||++++.+.|||+++.+...+++|++|||+|+ |++|++++|+++..|+++++++++++
T Consensus 127 ~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~ 206 (357)
T 1zsy_A 127 VFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 206 (357)
T ss_dssp EEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHH
T ss_pred ecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchH
Confidence 57889999999999999999999999999999988777899999999998 99999999999999998888876543
Q ss_pred -hHHHHHHHcCCCEEeeCCCh--HHHHHhcC---CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcccc
Q 030694 78 -KKSEAVERLGADSFLVSRDQ--DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPL 150 (173)
Q Consensus 78 -~~~~~~~~~g~~~v~~~~~~--~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~ 150 (173)
+++.+++ +|+++++|+.+. +.+.++.+ ++|++|||+|++. ...++++++++|+++.+|...+ ...++...+
T Consensus 207 ~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 284 (357)
T 1zsy_A 207 KLSDRLKS-LGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLL 284 (357)
T ss_dssp HHHHHHHH-TTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHH
T ss_pred HHHHHHHh-cCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHH
Confidence 4567777 999999986432 12222222 5999999999884 5679999999999999986543 456676677
Q ss_pred ccCcccc
Q 030694 151 LTGEEED 157 (173)
Q Consensus 151 ~~~~~~~ 157 (173)
+.+++++
T Consensus 285 ~~~~~~i 291 (357)
T 1zsy_A 285 IFKDLKL 291 (357)
T ss_dssp HHSCCEE
T ss_pred HhcCceE
Confidence 7777763
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-25 Score=173.21 Aligned_cols=153 Identities=19% Similarity=0.165 Sum_probs=130.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|+++++++|+++++++||.+++++.|||+++... ..+++|++|+|+|+ |++|++++|+++..|++|++++++++|
T Consensus 178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~ 257 (447)
T 4a0s_A 178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK 257 (447)
T ss_dssp EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 578899999999999999999999999999999643 66799999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCChH---------------------HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 79 KSEAVERLGADSFLVSRDQD---------------------EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~---------------------~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++.+++ +|++.++++.+.+ .+.+.. +++|++|||+|.. .+..++.+++++|+++.+
T Consensus 258 ~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 258 EAAVRA-LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEEES
T ss_pred HHHHHh-cCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEEEE
Confidence 999988 9999888864322 222222 3899999999997 689999999999999999
Q ss_pred CCCCC-CcccCccccccCccc
Q 030694 137 GAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 137 g~~~~-~~~~~~~~~~~~~~~ 156 (173)
|...+ ...++...++.+...
T Consensus 336 G~~~~~~~~~~~~~~~~~~~~ 356 (447)
T 4a0s_A 336 GSSSGYLHTFDNRYLWMKLKK 356 (447)
T ss_dssp CCTTCSEEEEEHHHHHHTTCE
T ss_pred ecCCCcccccCHHHHHhCCCE
Confidence 97665 346666667777665
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=165.26 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=123.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++||++++.++|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 104 ~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 183 (340)
T 3gms_A 104 KTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE 183 (340)
T ss_dssp EEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred EcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 57889999999999999999999999999999988788899999999998 69999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|+++++|+.+.+..+.+ . .++|++|||+|.+. ....+++++++|+++.+|...+
T Consensus 184 ~~~~-lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~ 247 (340)
T 3gms_A 184 ELLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG 247 (340)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS
T ss_pred HHHh-CCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC
Confidence 9998 999999998875544433 2 28999999999984 6677799999999999997654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-25 Score=168.15 Aligned_cols=153 Identities=31% Similarity=0.474 Sum_probs=130.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++++++++.|||+++.+. .+++|++|+|+|+ |++|++++++++..|++|+++++++++++
T Consensus 130 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~ 208 (347)
T 2hcy_A 130 TADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE 208 (347)
T ss_dssp EEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred EeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH
Confidence 568889999999999999999999999999999877 5699999999998 99999999999999999999999999998
Q ss_pred HHHHHcCCCEEeeCCC-hH---HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRD-QD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~---~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|++.++|+.+ .+ .+.+.. +++|++||++|....+..++++|+++|+++.+|...+ ..+++...++.++
T Consensus 209 ~~~~-~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 287 (347)
T 2hcy_A 209 LFRS-IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKS 287 (347)
T ss_dssp HHHH-TTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTT
T ss_pred HHHH-cCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCC
Confidence 8887 99988888763 22 222322 3799999999986678899999999999999997663 3566767777777
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
.+
T Consensus 288 ~~ 289 (347)
T 2hcy_A 288 IS 289 (347)
T ss_dssp CE
T ss_pred cE
Confidence 76
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=163.76 Aligned_cols=135 Identities=25% Similarity=0.286 Sum_probs=118.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++++++++.|||+++ +...+++|++|+|+|+ |++|++++|+++..|++|+++++ +++++
T Consensus 113 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~~ 190 (321)
T 3tqh_A 113 CASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHA 190 (321)
T ss_dssp EECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHHH
T ss_pred EecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchHH
Confidence 578899999999999999999999999999999 5566699999999985 99999999999999999999885 55688
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|+++++|+.+.+...+..+++|++|||+|++. ...++++++++|+++.+|...
T Consensus 191 ~~~~-lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~ 248 (321)
T 3tqh_A 191 FLKA-LGAEQCINYHEEDFLLAISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTIT 248 (321)
T ss_dssp HHHH-HTCSEEEETTTSCHHHHCCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTT
T ss_pred HHHH-cCCCEEEeCCCcchhhhhccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCC
Confidence 8887 999999999887634444579999999999985 689999999999999998654
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=161.41 Aligned_cols=152 Identities=20% Similarity=0.228 Sum_probs=124.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|+++++++|++++++++|.++ ...++++++... .+++|++|+|+|+|++|++++|+++.+|++ +++++++++|++
T Consensus 122 ~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~~~~~-~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~ 199 (346)
T 4a2c_A 122 VVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLA-QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLA 199 (346)
T ss_dssp EEEGGGEEECCTTSCGGGGGGHH-HHHHHHHHHHHT-TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred ccchheEEECCCCCCHHHHHhch-HHHHHHHHHHHh-ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHH
Confidence 57889999999999999998765 345556665554 459999999999999999999999999995 577888999999
Q ss_pred HHHHHcCCCEEeeCCChHHH---HHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc---ccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQDEM---QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL---ELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~---~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~ 152 (173)
.+++ +|+++++|+++.+.. .++. +++|+++|++|.+..++.++++++++|+++.+|...+.. .++...++.
T Consensus 200 ~a~~-lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 278 (346)
T 4a2c_A 200 LAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILR 278 (346)
T ss_dssp HHHH-TTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHH
T ss_pred HHHH-cCCeEEEeCCCCCHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhh
Confidence 9998 999999999875433 3332 389999999999878999999999999999999876643 334456677
Q ss_pred Cccc
Q 030694 153 GEEE 156 (173)
Q Consensus 153 ~~~~ 156 (173)
|+++
T Consensus 279 k~~~ 282 (346)
T 4a2c_A 279 KELT 282 (346)
T ss_dssp HTCE
T ss_pred ceeE
Confidence 7776
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-24 Score=164.66 Aligned_cols=137 Identities=24% Similarity=0.272 Sum_probs=120.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC----CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL----DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++|++.++++|+++++++||++++++.|||+++.+... +++|++|+|+|+ |++|++++|+++..|++|++++ ++
T Consensus 139 ~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~ 217 (375)
T 2vn8_A 139 VVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQ 217 (375)
T ss_dssp EEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CG
T ss_pred EEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-Ch
Confidence 57889999999999999999999999999999976666 799999999996 9999999999999999999988 57
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++++.+++ +|++.++|+.+.+..+++. +++|++|||+|+. ..+..++++++++|+++.+|...
T Consensus 218 ~~~~~~~~-lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 218 DASELVRK-LGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp GGHHHHHH-TTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred HHHHHHHH-cCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence 88888877 9999999988766555554 4899999999998 44588999999999999999654
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-25 Score=171.69 Aligned_cols=152 Identities=18% Similarity=0.191 Sum_probs=126.0
Q ss_pred ccccc--eeEECCCCCCccc----ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 030694 2 VADEH--FVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST 74 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~ 74 (173)
++|++ .++++|+++++++ ++++++++.|||+++. ...+++|++|||+|+|++|++++|+++.+|+ +|+++++
T Consensus 140 ~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 218 (398)
T 2dph_A 140 LVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQ 218 (398)
T ss_dssp EESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred EeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45665 7999999999998 8899999999999995 4566999999999999999999999999999 9999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCChHH----HHHhcC--CccEEEEcCCCcc--------------chHHHHHhhhcCCEEE
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQDE----MQAAMG--TMDGIIDTVSAVH--------------PLMPLIGLLKSQGKLV 134 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~~~----~~~~~~--~~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v 134 (173)
+++|++.+++ +|++ ++|+.+.+. +.+..+ ++|++||++|... .+..++++++++|+++
T Consensus 219 ~~~~~~~a~~-lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv 296 (398)
T 2dph_A 219 NPERLKLLSD-AGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG 296 (398)
T ss_dssp CHHHHHHHHT-TTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHHH-cCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence 9999999988 9995 788876443 333332 7999999999863 5789999999999999
Q ss_pred EeCCCC-------------CCcccCccccccCccc
Q 030694 135 LLGAPE-------------KPLELPAFPLLTGEEE 156 (173)
Q Consensus 135 ~~g~~~-------------~~~~~~~~~~~~~~~~ 156 (173)
.+|... +...++...++.++++
T Consensus 297 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 331 (398)
T 2dph_A 297 IPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIR 331 (398)
T ss_dssp CCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCE
T ss_pred EeccccccccccccccccCCcccccHHHHhhcCCE
Confidence 999762 2235566666777765
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=166.19 Aligned_cols=154 Identities=19% Similarity=0.272 Sum_probs=128.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHh--hCCCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|++.++++|+++++++|+.+++++.|||.++.. ...+++++ +|+|+|+ |++|++++|+++..|++|++++++++
T Consensus 107 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~ 186 (330)
T 1tt7_A 107 SVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE 186 (330)
T ss_dssp EECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred EecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57889999999999999999999999999988753 24558886 9999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
|++.+++ +|+++++|+.+.+ ...++. +++|++|||+|++ .+..++++++++|+++.+|...+ ...++...++.+
T Consensus 187 ~~~~~~~-lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~ 264 (330)
T 1tt7_A 187 AADYLKQ-LGASEVISREDVYDGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILR 264 (330)
T ss_dssp THHHHHH-HTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTS
T ss_pred HHHHHHH-cCCcEEEECCCchHHHHHHhhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhc
Confidence 9999988 9999998864321 111122 3799999999997 78999999999999999997654 356676677777
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
+.++
T Consensus 265 ~~~i 268 (330)
T 1tt7_A 265 GVSL 268 (330)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 7764
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=166.16 Aligned_cols=151 Identities=27% Similarity=0.373 Sum_probs=131.0
Q ss_pred cccc-ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcch
Q 030694 2 VADE-HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~-~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~ 78 (173)
++|+ +.++++ +++++++++++++++.|||+++.+ ..++++++|+|+|+ |++|++++|+++.. |++|+++++++++
T Consensus 131 ~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~ 208 (347)
T 1jvb_A 131 IVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA 208 (347)
T ss_dssp EESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH
T ss_pred EecCccceEEe-CCCCHHHcccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 5688 899999 999999999999999999999977 55699999999999 59999999999999 9999999999999
Q ss_pred HHHHHHHcCCCEEeeCCChHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccCcccccc
Q 030694 79 KSEAVERLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLT 152 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~ 152 (173)
++.+++ +|++.++++.+.+. +.+.. +++|++||++|....++.++++++++|+++.+|... +. .++...++.
T Consensus 209 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~ 286 (347)
T 1jvb_A 209 VEAAKR-AGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITL 286 (347)
T ss_dssp HHHHHH-HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHH
T ss_pred HHHHHH-hCCCEEecCCCccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHh
Confidence 999987 99999998876554 33443 489999999999867889999999999999999766 55 677767777
Q ss_pred Cccc
Q 030694 153 GEEE 156 (173)
Q Consensus 153 ~~~~ 156 (173)
++.+
T Consensus 287 ~~~~ 290 (347)
T 1jvb_A 287 SEIQ 290 (347)
T ss_dssp HTCE
T ss_pred CceE
Confidence 7765
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=149.71 Aligned_cols=133 Identities=24% Similarity=0.337 Sum_probs=105.8
Q ss_pred ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
+.++++|+++++++++++++++.|||+++.+...+++|++|+|+|+ |++|++++++++..|++|+++++++++.+.+++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 5789999999999999999999999999987777799999999996 999999999999999999999999998888877
Q ss_pred HcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 85 RLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 85 ~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|.+.++|..+.+..+.+ . +++|++||++|.. .+..++++++++|+++.+|...
T Consensus 82 -~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 82 -LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp -TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGG
T ss_pred -cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCC
Confidence 898888887765443332 2 3799999999876 6889999999999999999754
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=163.27 Aligned_cols=135 Identities=21% Similarity=0.213 Sum_probs=115.5
Q ss_pred ccccc--eeEECCCCCCccc----ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 030694 2 VADEH--FVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST 74 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~ 74 (173)
++|++ .++++|+++++++ ++++++++.|||+++.. ..+++|++|||+|+|++|++++|+++.+|+ +|+++++
T Consensus 140 ~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~ 218 (398)
T 1kol_A 140 LVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDL 218 (398)
T ss_dssp EESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred EecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcC
Confidence 45665 7999999999887 78999999999999975 556999999999999999999999999999 7999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCChH----HHHHhcC--CccEEEEcCCCcc---------------chHHHHHhhhcCCEE
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQD----EMQAAMG--TMDGIIDTVSAVH---------------PLMPLIGLLKSQGKL 133 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~~~--~~d~vid~~g~~~---------------~~~~~~~~l~~~G~~ 133 (173)
+++|++.+++ +|++ ++++...+ .+.+..+ ++|++||++|... .+..++++++++|++
T Consensus 219 ~~~~~~~a~~-lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i 296 (398)
T 1kol_A 219 NPARLAHAKA-QGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKI 296 (398)
T ss_dssp CHHHHHHHHH-TTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEE
T ss_pred CHHHHHHHHH-cCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEE
Confidence 9999999988 9997 77876532 2333332 7999999999863 578999999999999
Q ss_pred EEeCCC
Q 030694 134 VLLGAP 139 (173)
Q Consensus 134 v~~g~~ 139 (173)
+.+|..
T Consensus 297 v~~G~~ 302 (398)
T 1kol_A 297 GIPGLY 302 (398)
T ss_dssp EECSCC
T ss_pred EEeccc
Confidence 999965
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-24 Score=163.50 Aligned_cols=149 Identities=19% Similarity=0.248 Sum_probs=124.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHH--h--hCCCC--C-------CCEEEEEcCChHHHHHHHHHHHCCCe
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR--F--YGLDK--P-------GMHVGVVGLGGLGHVAVKFAKAMGVK 68 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~--~--~~~~~--~-------g~~vlI~G~g~~G~~a~~~~~~~g~~ 68 (173)
++|++.++++|++++ ++| +++.++.|||+++. . ...++ + |++|+|+|+|++|++++|+++..|++
T Consensus 129 ~v~~~~~~~iP~~l~-~~A-al~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~ 206 (366)
T 2cdc_A 129 YDDPKYLVKIPKSIE-DIG-ILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLE 206 (366)
T ss_dssp EECGGGEEEECGGGT-TTG-GGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCE
T ss_pred EechHHeEECcCCcc-hhh-hhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCE
Confidence 578899999999999 775 58889999999998 3 44557 8 99999999999999999999999999
Q ss_pred EEEEeCCc---chHHHHHHHcCCCEEeeCCChHHHHH---hcCCccEEEEcCCCccch-HHHHHhhhcCCEEEEeCCCCC
Q 030694 69 VTVISTSP---SKKSEAVERLGADSFLVSRDQDEMQA---AMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 69 v~~~~~~~---~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|+++++++ ++++.+++ +|++.+ | .+ +..++ ..+++|++||++|....+ +.++++|+++|+++.+|...+
T Consensus 207 Vi~~~~~~~~~~~~~~~~~-~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~ 282 (366)
T 2cdc_A 207 VWMANRREPTEVEQTVIEE-TKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS 282 (366)
T ss_dssp EEEEESSCCCHHHHHHHHH-HTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS
T ss_pred EEEEeCCccchHHHHHHHH-hCCcee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 99999998 88888887 999888 7 54 32222 226899999999997667 899999999999999997665
Q ss_pred C-cccCccc---cccCccc
Q 030694 142 P-LELPAFP---LLTGEEE 156 (173)
Q Consensus 142 ~-~~~~~~~---~~~~~~~ 156 (173)
. ..++... ++.++.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~ 301 (366)
T 2cdc_A 283 GSVPLDYKTLQEIVHTNKT 301 (366)
T ss_dssp CEEEEEHHHHHHHHHTTCE
T ss_pred CccccChhhhHHHHhcCcE
Confidence 4 5666666 7777776
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=162.86 Aligned_cols=151 Identities=14% Similarity=0.055 Sum_probs=123.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEc--CChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG--LGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G--~g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
++|++.++++|+++++++|+++++.+.|||+++.... ++|++|+|+| +|++|++++|+++..|++|++++++++|+
T Consensus 132 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~ 209 (379)
T 3iup_A 132 CIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA 209 (379)
T ss_dssp EEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH
T ss_pred EeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 5788999999999999999999999999998887654 7899999994 49999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhh-----cC-----------CEEEEeCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLK-----SQ-----------GKLVLLGA 138 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~ 138 (173)
+.+++ +|+++++|+++.++.+++. .++|++|||+|++...+.++++++ ++ |+++.+|.
T Consensus 210 ~~~~~-lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~ 288 (379)
T 3iup_A 210 DLLKA-QGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG 288 (379)
T ss_dssp HHHHH-TTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCC
T ss_pred HHHHh-CCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecC
Confidence 99998 9999999998766555443 289999999999866788888886 44 55555554
Q ss_pred CCCCcccCccccccCccc
Q 030694 139 PEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~ 156 (173)
... .+++...++.++.+
T Consensus 289 ~~~-~~~~~~~~~~~~~~ 305 (379)
T 3iup_A 289 LDT-SPTEFNRNFGMAWG 305 (379)
T ss_dssp SEE-EEEEECCCSCSCEE
T ss_pred CCC-CccccccccccceE
Confidence 332 23444555566654
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=153.82 Aligned_cols=154 Identities=21% Similarity=0.180 Sum_probs=125.6
Q ss_pred ccccceeEECCCC----CCccc-ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 2 VADEHFVVRIPEG----APLDA-TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 2 ~~~~~~~~~~p~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|++.++++|++ +++++ ++++++++.|||+++.+...+++|++++|+|+ |++|++++++++..|++|++++++
T Consensus 100 ~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 179 (333)
T 1v3u_A 100 ISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179 (333)
T ss_dssp EESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999999997 88887 48999999999999977777799999999998 999999999999999999999999
Q ss_pred cchHHHHHHHcCCCEEeeCCC-hHHH---HHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC------c-
Q 030694 76 PSKKSEAVERLGADSFLVSRD-QDEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP------L- 143 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~-~~~~---~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~- 143 (173)
+++++.+++ +|++.++|+.+ .+.. .+.. +++|++||++|.. .+..++++++++|+++.+|...+. .
T Consensus 180 ~~~~~~~~~-~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 257 (333)
T 1v3u_A 180 DEKIAYLKQ-IGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPP 257 (333)
T ss_dssp HHHHHHHHH-TTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCB
T ss_pred HHHHHHHHh-cCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCC
Confidence 999999966 99988888876 3332 2222 4799999999987 589999999999999999976531 1
Q ss_pred ccCccccccCcccc
Q 030694 144 ELPAFPLLTGEEED 157 (173)
Q Consensus 144 ~~~~~~~~~~~~~~ 157 (173)
.++...++.++.++
T Consensus 258 ~~~~~~~~~~~~~i 271 (333)
T 1v3u_A 258 GPSPESIIYKQLRI 271 (333)
T ss_dssp CCCHHHHHHTTCEE
T ss_pred CcCHHHHhhcCceE
Confidence 13455666776653
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-23 Score=158.79 Aligned_cols=134 Identities=22% Similarity=0.278 Sum_probs=107.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~ 79 (173)
++|++.++++|++++++++|++++++.|||+++.+...+++|++|+|+|+ |++|++++|+++..| ++|++++ +++|+
T Consensus 102 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~ 180 (349)
T 4a27_A 102 CTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKH 180 (349)
T ss_dssp EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGH
T ss_pred EecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHH
Confidence 57889999999999999999999999999999988788899999999998 999999999999986 5888887 55666
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.++ +|++++++ .+.++.++ .. +++|++|||+|++. +..++++++++|+++.+|...
T Consensus 181 ~~~~--~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~ 241 (349)
T 4a27_A 181 EAIK--DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSN 241 (349)
T ss_dssp HHHG--GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC--------CTTEEEEEEEEEEC---
T ss_pred HHHH--cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCc
Confidence 6665 89999998 54443333 32 48999999999984 689999999999999999653
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=156.38 Aligned_cols=135 Identities=21% Similarity=0.279 Sum_probs=118.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|+. + .+++++++++.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|+++++++++++
T Consensus 125 ~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 202 (362)
T 2c0c_A 125 VVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA 202 (362)
T ss_dssp EEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred EEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 5788999999996 3 4678899999999999988777799999999996 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|++.++++++.+..+.+ . +++|++|||+|.. .+..++++++++|+++.+|...
T Consensus 203 ~~~~-~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~ 264 (362)
T 2c0c_A 203 FLKS-LGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFIS 264 (362)
T ss_dssp HHHH-TTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGG
T ss_pred HHHH-cCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCC
Confidence 9998 999999998765433332 2 3799999999986 6899999999999999999754
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-23 Score=175.26 Aligned_cols=136 Identities=24% Similarity=0.336 Sum_probs=120.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++++|++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++ |.+
T Consensus 305 ~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~ 383 (795)
T 3slk_A 305 VADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQ 383 (795)
T ss_dssp EEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG
T ss_pred EeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh
Confidence 57889999999999999999999999999999988888899999999997 9999999999999999999999766 555
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.++ +|+++++|+++.++.+++. .++|++||++|+. .+..++++++++|+++.+|....
T Consensus 384 ~l~--lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~ 446 (795)
T 3slk_A 384 AVE--LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGE-FADASLRMLPRGGRFLELGKTDV 446 (795)
T ss_dssp GSC--SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTT-TTHHHHTSCTTCEEEEECCSTTC
T ss_pred hhh--cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcH-HHHHHHHHhcCCCEEEEeccccc
Confidence 443 8999999988766555443 2899999999997 68999999999999999997654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=155.89 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=119.0
Q ss_pred ccccceeEECCCCC-----CcccccchhhHHHHHHHHHHhhCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEE
Q 030694 2 VADEHFVVRIPEGA-----PLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVI 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~ 72 (173)
++|++.++++|+++ +++ ++++++++.|||+++.+...+++| ++|+|+|+ |++|++++|+++..|+ +|+++
T Consensus 114 ~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~ 192 (357)
T 2zb4_A 114 ILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGI 192 (357)
T ss_dssp EEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 57889999999998 555 678999999999999777777999 99999998 9999999999999999 99999
Q ss_pred eCCcchHHHHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 73 STSPSKKSEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++++++++.+++++|++.++|+.+.+..+.+ . +++|++|||+|+. .+..++++++++|+++.+|...
T Consensus 193 ~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~ 263 (357)
T 2zb4_A 193 CGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQIS 263 (357)
T ss_dssp ESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGG
T ss_pred eCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCcc
Confidence 9999999888866899999998765433332 2 3799999999985 6899999999999999999754
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=153.90 Aligned_cols=154 Identities=18% Similarity=0.173 Sum_probs=124.6
Q ss_pred ccccce--eEECCC---CCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 2 VADEHF--VVRIPE---GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 2 ~~~~~~--~~~~p~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
+++++. ++++|+ .++++ +|++++++.|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|++++++
T Consensus 111 ~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~ 189 (345)
T 2j3h_A 111 VITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189 (345)
T ss_dssp EECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555 899986 35555 67899999999999977777799999999998 999999999999999999999999
Q ss_pred cchHHHHHHHcCCCEEeeCCCh----HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC------Ccc
Q 030694 76 PSKKSEAVERLGADSFLVSRDQ----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK------PLE 144 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~ 144 (173)
+++++.+++++|++.++|+.+. +.+.+.. +++|++||++|.. .+..++++++++|+++.+|...+ ...
T Consensus 190 ~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~ 268 (345)
T 2j3h_A 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGV 268 (345)
T ss_dssp HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCB
T ss_pred HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCcccc
Confidence 9999999844999988887652 2333333 3799999999986 78999999999999999996543 234
Q ss_pred cCccccccCcccc
Q 030694 145 LPAFPLLTGEEED 157 (173)
Q Consensus 145 ~~~~~~~~~~~~~ 157 (173)
++...++.++..+
T Consensus 269 ~~~~~~~~~~~~i 281 (345)
T 2j3h_A 269 HNLSNIIYKRNRI 281 (345)
T ss_dssp SCTTHHHHHTCEE
T ss_pred ccHHHHhhhceee
Confidence 5666676776653
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=172.62 Aligned_cols=138 Identities=23% Similarity=0.311 Sum_probs=123.3
Q ss_pred CccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 1 v~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
+++|++.++++|+++++++||.+++++.|||+++.....+++|++|||+|+ |++|++++|+++..|++|++++.+++|+
T Consensus 1626 v~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~ 1705 (2512)
T 2vz8_A 1626 VLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKR 1705 (2512)
T ss_dssp EECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred EEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhh
Confidence 357889999999999999999999999999999988888899999999987 9999999999999999999999999999
Q ss_pred HHHHHH---cCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 80 SEAVER---LGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 80 ~~~~~~---~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+++. +|+++++++++.++.+++. .++|++|||+++. .+..++++++++|+++.+|..
T Consensus 1706 ~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~l~~~l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A 1706 AYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-KLQASVRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp HHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-HHHHHHTTEEEEEEEEECCCH
T ss_pred HHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-HHHHHHHhcCCCcEEEEeecc
Confidence 999874 5788899988766555442 2799999999865 689999999999999999954
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=99.33 E-value=8.4e-12 Score=96.31 Aligned_cols=113 Identities=19% Similarity=0.175 Sum_probs=85.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
++++|+|+|+|++|+.+++.++..|++|++++++++|++.+++ .+... +++... +...+...++|++|+|++.+..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET-LFGSRVELLYSNS-AEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHGGGSEEEECCH-HHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-hhCceeEeeeCCH-HHHHHHHcCCCEEEECCCcCCC
Confidence 3489999999999999999999999999999999999999887 44322 344332 2333334489999999987642
Q ss_pred ------hHHHHHhhhcCCEEEEeCCCCC-------CcccCccccccCccc
Q 030694 120 ------LMPLIGLLKSQGKLVLLGAPEK-------PLELPAFPLLTGEEE 156 (173)
Q Consensus 120 ------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~ 156 (173)
....+..|+++|+++.++..++ ..+++...+..+++.
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~ 293 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVV 293 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEE
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEE
Confidence 5678899999999999997653 234555555566655
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=94.69 Aligned_cols=99 Identities=22% Similarity=0.228 Sum_probs=80.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
++++|+|+|+|++|+.+++.++..|++|+++++++++++.+++.+|.....+......+.+...++|++++|++.+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t 246 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA 246 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 589999999999999999999999999999999999988887767765323333333444455589999999987643
Q ss_pred ----hHHHHHhhhcCCEEEEeCCCC
Q 030694 120 ----LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 ----~~~~~~~l~~~G~~v~~g~~~ 140 (173)
....+..|+++|+++.++...
T Consensus 247 ~~li~~~~l~~mk~g~~iV~va~~~ 271 (377)
T 2vhw_A 247 PKLVSNSLVAHMKPGAVLVDIAIDQ 271 (377)
T ss_dssp CCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred cceecHHHHhcCCCCcEEEEEecCC
Confidence 578889999999999998544
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-11 Score=93.44 Aligned_cols=100 Identities=18% Similarity=0.265 Sum_probs=77.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
++++|+|+|+|++|+.+++.++..|++|+++++++++++.+.+.+|.....+..+.+.+.+...++|++++|++.+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 46899999999999999999999999999999999998888775776643444444445555568999999999763
Q ss_pred ---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.....++.|+++|+++.++...+
T Consensus 245 ~~li~~~~l~~mk~gg~iV~v~~~~g 270 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVDVAVDQG 270 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEECC----
T ss_pred chhHHHHHHHhhcCCCEEEEEecCCC
Confidence 15688899999999999987654
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=93.13 Aligned_cols=119 Identities=19% Similarity=0.232 Sum_probs=93.3
Q ss_pred hhHHHHHHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 24 LCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 24 ~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
+....++|+++.+.. ...+|++|+|+|.|.+|..+++.++..|++|+++++++.+.+.+++ +|.+ +++ +.+
T Consensus 254 ~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-~Ga~-~~~------l~e 325 (494)
T 3ce6_A 254 YGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-EGFD-VVT------VEE 325 (494)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------HHH
T ss_pred hhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCE-Eec------HHH
Confidence 345566677765543 2578999999999999999999999999999999999998888887 8875 322 223
Q ss_pred hcCCccEEEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCcccCcccccc
Q 030694 103 AMGTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (173)
...+.|++++++|....+. ..+..|+++|+++.+|.... .++...+..
T Consensus 326 ~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 326 AIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp HGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHH
T ss_pred HHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHH
Confidence 4568999999999887676 78999999999999996543 355555544
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.5e-10 Score=88.72 Aligned_cols=114 Identities=18% Similarity=0.186 Sum_probs=84.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCC----------------------hH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD----------------------QD 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~----------------------~~ 98 (173)
++++|+|+|+|.+|+.+++.++.+|++|+++++++++++.+++ +|++.+ ++..+ ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 6899999999999999999999999999999999999999988 997654 22211 11
Q ss_pred HHHHhcCCccEEEEcC---CCcc--c-hHHHHHhhhcCCEEEEeCCCCC-Cc--ccCccccccCccc
Q 030694 99 EMQAAMGTMDGIIDTV---SAVH--P-LMPLIGLLKSQGKLVLLGAPEK-PL--ELPAFPLLTGEEE 156 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~~-~~--~~~~~~~~~~~~~ 156 (173)
.+.+...++|++|+|+ |.+. . ....+..|+++++++.++...+ .. ..+...+..+++.
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~ 316 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVK 316 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEE
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEE
Confidence 2445556899999999 5322 2 3678999999999999986432 22 2244444455554
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-09 Score=84.55 Aligned_cols=98 Identities=23% Similarity=0.300 Sum_probs=75.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCC-------------ChH-------HH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSR-------------DQD-------EM 100 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~-------------~~~-------~~ 100 (173)
++++|+|+|+|.+|+.+++.++.+|++|++++++.++++.+++ +|++.+. +.. ..+ .+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999998877 8876442 211 111 23
Q ss_pred HHhcCCccEEEEcCCCc-----cch-HHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAV-----HPL-MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+...+.|++|++++.+ ..+ ...+..|++++.++.++...
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~ 295 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQN 295 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCC
Confidence 34445899999995332 223 57899999999999999653
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.8e-09 Score=83.29 Aligned_cols=99 Identities=20% Similarity=0.197 Sum_probs=77.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee---------CC----------ChHHHHH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV---------SR----------DQDEMQA 102 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~---------~~----------~~~~~~~ 102 (173)
++.+|+|+|+|.+|+.+++.++.+|++|+++++++++++.+.+ +|++.+-. +. ....+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 6789999999999999999999999999999999999999988 88753310 00 1123344
Q ss_pred hcCCccEEEEcCCCc-----c-chHHHHHhhhcCCEEEEeCCCCC
Q 030694 103 AMGTMDGIIDTVSAV-----H-PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 103 ~~~~~d~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
...+.|++|.++..+ . .....++.|++++.++.++...+
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~G 306 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETG 306 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCC
Confidence 556999999997433 1 24689999999999999986554
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=9.4e-11 Score=91.73 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=85.0
Q ss_pred eEECCCCCCcccccchhhHHHHHHHHHHhhC---CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHH
Q 030694 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYG---LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAV 83 (173)
Q Consensus 8 ~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~ 83 (173)
++++|+.++.+.++. ..++.++|.++.... .-.+|++|+|+|+|++|.++++.++..|+ +|++++++.++.+.+.
T Consensus 130 a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la 208 (404)
T 1gpj_A 130 AINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA 208 (404)
T ss_dssp HHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred HhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 344555554444332 334456666654322 11579999999999999999999999999 9999999998874444
Q ss_pred HHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH--HHHHh--h--hcCCEEEEeCCC
Q 030694 84 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM--PLIGL--L--KSQGKLVLLGAP 139 (173)
Q Consensus 84 ~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~ 139 (173)
+.+|.+ +++.. ...+...++|++++|+|....+. ..+.. + ++++.++.++..
T Consensus 209 ~~~g~~-~~~~~---~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 209 RDLGGE-AVRFD---ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp HHHTCE-ECCGG---GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred HHcCCc-eecHH---hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 448875 33332 23334458999999999764332 45555 4 557777777654
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.5e-09 Score=81.66 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=76.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee-------------CCC----------hH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV-------------SRD----------QD 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~-------------~~~----------~~ 98 (173)
++.+|+|+|+|.+|+.+++.++.+|++|+++++++++++.+++ +|.+.+.. +.. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 5789999999999999999999999999999999999999988 88753211 110 11
Q ss_pred HHHHhcCCccEEEEcCCCcc------chHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+...+.|++|.|+..+. .....+..|++|+.++.++...
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~ 315 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVER 315 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCC
Confidence 23334459999999975441 3468999999999999998644
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=73.65 Aligned_cols=104 Identities=19% Similarity=0.198 Sum_probs=76.5
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
+.++..... ..+++++|+|+|.+|...++.++..|++|+++++++++.+.+.+.++.. +....+. .+...++|++
T Consensus 10 ~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~~~---~~~~~~~Div 84 (144)
T 3oj0_A 10 SIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLINDI---DSLIKNNDVI 84 (144)
T ss_dssp HHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECSCH---HHHHHTCSEE
T ss_pred HHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeecCH---HHHhcCCCEE
Confidence 455544443 4489999999999999999998889999999999999888766668853 2233322 2234479999
Q ss_pred EEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.|++....+.. ...+++++.++.++.+.
T Consensus 85 i~at~~~~~~~~-~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 85 ITATSSKTPIVE-ERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp EECSCCSSCSBC-GGGCCTTCEEEECCSSC
T ss_pred EEeCCCCCcEee-HHHcCCCCEEEEccCCc
Confidence 999998743322 26788999999998653
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=2e-08 Score=78.37 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=85.5
Q ss_pred HHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCcc
Q 030694 30 VYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 30 a~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (173)
.+.++.+.. ....|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|.. +. .+.+...+.|
T Consensus 206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-~G~~-v~------~Leeal~~AD 277 (435)
T 3gvp_A 206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-DGFR-LV------KLNEVIRQVD 277 (435)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-EC------CHHHHTTTCS
T ss_pred HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-cCCE-ec------cHHHHHhcCC
Confidence 355555543 3468999999999999999999999999999999998877666665 6643 21 1445667899
Q ss_pred EEEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCcccCc
Q 030694 109 GIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPLELPA 147 (173)
Q Consensus 109 ~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~ 147 (173)
+++.|.|....+. ..+..|++++.++.+|....+..++.
T Consensus 278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~ 317 (435)
T 3gvp_A 278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVAS 317 (435)
T ss_dssp EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGG
T ss_pred EEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHH
Confidence 9999998876666 88999999999999987655444433
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.6e-08 Score=73.29 Aligned_cols=96 Identities=21% Similarity=0.292 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-++++++|+|.|.+|..+++.++..|++|++++++.++.+.+.+ +|... ++. +.+.+...+.|+++.+++.....
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i~ 227 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEP-FHI---SKAAQELRDVDVCINTIPALVVT 227 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEE-EEG---GGHHHHTTTCSEEEECCSSCCBC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee-cCh---hhHHHHhcCCCEEEECCChHHhC
Confidence 57899999999999999999999999999999999887777766 78653 222 23445567899999999875333
Q ss_pred HHHHHhhhcCCEEEEeCCCCC
Q 030694 121 MPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~ 141 (173)
...+..|++++.++.++..+.
T Consensus 228 ~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 228 ANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp HHHHHHSCTTCEEEECSSTTC
T ss_pred HHHHHhcCCCCEEEEecCCCC
Confidence 567888999999999986444
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.7e-08 Score=63.97 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=70.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.+++|+|+|.+|..+++.+...| .+|+++++++++.+.+.. .+... ..|..+.+.+.+...++|++|+|+|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-MGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-TTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-CCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4578999999999999999999999 799999999988888775 56432 34555566666677799999999986643
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
....-.+.+.+..++.++
T Consensus 83 ~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHhCCCEEEec
Confidence 333334445555655543
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.6e-08 Score=67.32 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=70.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHh--cCCccEEEEcCCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA--MGTMDGIIDTVSAVH 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~--~~~~d~vid~~g~~~ 118 (173)
+++++|+|+|.+|..+++.++.. |.+|+++++++++.+.+++ .|...+. |..+.+.+.+. ..++|++|.++++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ 117 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence 66899999999999999999998 9999999999999988887 7866443 55555556555 458999999999874
Q ss_pred chHHHHHhh---hcCCEEEEeC
Q 030694 119 PLMPLIGLL---KSQGKLVLLG 137 (173)
Q Consensus 119 ~~~~~~~~l---~~~G~~v~~g 137 (173)
........+ .+..+++...
T Consensus 118 ~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 118 GNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEE
Confidence 333333334 3445666543
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-07 Score=74.23 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=81.0
Q ss_pred HHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCcc
Q 030694 30 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 30 a~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (173)
.+.++.+. ...-.|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|.. +.+ +++.....|
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-~G~~-vv~------LeElL~~AD 304 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM-DGFE-VVT------LDDAASTAD 304 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCE-ECC------HHHHGGGCS
T ss_pred HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh-cCce-ecc------HHHHHhhCC
Confidence 35555443 44568999999999999999999999999999999998876655554 5653 221 345566899
Q ss_pred EEEEcCCCccch-HHHHHhhhcCCEEEEeCCCCC
Q 030694 109 GIIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 109 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++.+.|....+ ...+..|++++.++.+|....
T Consensus 305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp EEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred EEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence 999999987655 588899999999999986553
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2e-08 Score=68.25 Aligned_cols=96 Identities=10% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHh-cCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|.+|..+++.++..|.+|+++++++++.+.+++..|...+. +..+.+.+.+. ..++|++|.+++...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 5688999999999999999999999999999999999887776225654332 23334444433 347999999999875
Q ss_pred chHHHHHhhhc-CC--EEEEe
Q 030694 119 PLMPLIGLLKS-QG--KLVLL 136 (173)
Q Consensus 119 ~~~~~~~~l~~-~G--~~v~~ 136 (173)
....+...+++ ++ +++..
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 44455555554 44 44443
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.78 E-value=9.8e-08 Score=71.71 Aligned_cols=97 Identities=21% Similarity=0.284 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-++++++|+|+|.+|..+++.++..|++|++.+++.++.+.+.+ +|.. .++. ..+.+...+.|+++.+++....-
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~-~~~~---~~l~~~l~~aDvVi~~~p~~~i~ 229 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLV-PFHT---DELKEHVKDIDICINTIPSMILN 229 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCE-EEEG---GGHHHHSTTCSEEEECCSSCCBC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCe-EEch---hhHHHHhhCCCEEEECCChhhhC
Confidence 57899999999999999999999999999999999887777766 7754 3332 23445667899999999976333
Q ss_pred HHHHHhhhcCCEEEEeCCCCCC
Q 030694 121 MPLIGLLKSQGKLVLLGAPEKP 142 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~ 142 (173)
...+..|++++.++.++..+..
T Consensus 230 ~~~~~~mk~g~~lin~a~g~~~ 251 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLASRPGG 251 (300)
T ss_dssp HHHHTTSCTTCEEEECSSTTCS
T ss_pred HHHHHhCCCCCEEEEEeCCCCC
Confidence 4677889999999999865443
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.74 E-value=4.2e-08 Score=72.78 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=78.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-+|+.+||.|+ +++|++.++.+...|++|+++++++++++.+.+++|.... .|-.+.+.++++ .+++|+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899999998 8999999999999999999999999999888777874322 344444433332 358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.|+++|+++.+++..+
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~ 163 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG 163 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence 999998741 24466778888999999986554
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.2e-07 Score=73.76 Aligned_cols=104 Identities=18% Similarity=0.199 Sum_probs=79.7
Q ss_pred HHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++.+. ...-.|++++|+|+|++|..+++.++..|++|+++++++.+...+.. .|.+ +.+ ..+....+|+
T Consensus 252 ~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-~g~d-v~~------lee~~~~aDv 323 (488)
T 3ond_A 252 PDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-EGLQ-VLT------LEDVVSEADI 323 (488)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------GGGTTTTCSE
T ss_pred HHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-hCCc-cCC------HHHHHHhcCE
Confidence 3444433 32357999999999999999999999999999999999888777776 5643 211 1234558999
Q ss_pred EEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCC
Q 030694 110 IIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKP 142 (173)
Q Consensus 110 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~ 142 (173)
++++.|....+. ..+..|++++.++..|....+
T Consensus 324 Vi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~E 357 (488)
T 3ond_A 324 FVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNE 357 (488)
T ss_dssp EEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTT
T ss_pred EEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcc
Confidence 999999876665 488999999999999865433
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=5.2e-07 Score=67.45 Aligned_cols=98 Identities=13% Similarity=0.209 Sum_probs=73.0
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vi 111 (173)
...++++++||.+|+|+.++.+..+++..|++|++++.+++..+.+++.+ |.+ .++..+..+. ..+.+|+|+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l---~d~~FDvV~ 193 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI---DGLEFDVLM 193 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG---GGCCCSEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC---CCCCcCEEE
Confidence 45568999999999987777777778878999999999999988888742 432 2232222222 145899999
Q ss_pred EcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
.....+ ..++.+.+.|+|||+++...
T Consensus 194 ~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 194 VAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 766543 35778899999999998775
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5e-07 Score=70.71 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=84.6
Q ss_pred HHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++.+. ...-.|++|.|+|.|.+|..+++.++..|++|+++++++.+...+.. .|.... .+.+.....|+
T Consensus 198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~-~G~~~~-------sL~eal~~ADV 269 (436)
T 3h9u_A 198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM-EGYQVL-------LVEDVVEEAHI 269 (436)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-------CHHHHTTTCSE
T ss_pred HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-hCCeec-------CHHHHHhhCCE
Confidence 4455443 33357999999999999999999999999999999998877766666 665322 24556678999
Q ss_pred EEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCcccCcccccc
Q 030694 110 IIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (173)
Q Consensus 110 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (173)
++.+.+....+. ..+..|+++..++.+|... ..++...+..
T Consensus 270 Vilt~gt~~iI~~e~l~~MK~gAIVINvgRg~--vEID~~~L~~ 311 (436)
T 3h9u_A 270 FVTTTGNDDIITSEHFPRMRDDAIVCNIGHFD--TEIQVAWLKA 311 (436)
T ss_dssp EEECSSCSCSBCTTTGGGCCTTEEEEECSSSG--GGBCHHHHHH
T ss_pred EEECCCCcCccCHHHHhhcCCCcEEEEeCCCC--CccCHHHHHh
Confidence 999998876555 7788899999999998433 3455555544
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.55 E-value=3.8e-07 Score=66.80 Aligned_cols=101 Identities=19% Similarity=0.254 Sum_probs=73.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH-------hcCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA-------AMGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~-------~~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++ ..+++|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999998 999999999999999999999999998888877666332 234444433332 2358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.++..++++|+++.+++..+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~ 142 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD 142 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence 999998631 12234455667899999986544
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.46 E-value=4e-06 Score=55.77 Aligned_cols=96 Identities=20% Similarity=0.163 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHh-cCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~~~d~vid~~g~~~ 118 (173)
+-.++++|+|+|.+|..+++.++..|.+|+++++++++.+.+++ .|...+. |..+.+.+.+. ..++|.++-+++...
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence 34578999999999999999999999999999999999999888 7865433 44455555543 248999999999873
Q ss_pred chH---HHHHhhhcCCEEEEeC
Q 030694 119 PLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 ~~~---~~~~~l~~~G~~v~~g 137 (173)
... ..++.+.+..+++.-.
T Consensus 84 ~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 84 EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEEE
Confidence 222 3344555666766543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-06 Score=62.89 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHh-------cCCccEEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
++++||.|+ +++|++.++.+...|++|+++++++++.+.+.++.+... ..|-.+.+.+++. .+++|++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999998 899999999999999999999999998888777433211 2344444433332 358999999
Q ss_pred cCCCcc-------------------------chHHHHHhh-hcCCEEEEeCCCCC
Q 030694 113 TVSAVH-------------------------PLMPLIGLL-KSQGKLVLLGAPEK 141 (173)
Q Consensus 113 ~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~~ 141 (173)
+.|... ..+.+++.| +.+|+++.+++..+
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~ 136 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA 136 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence 998631 123444555 45799999986544
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-06 Score=63.20 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=72.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ |.+. ..|-.+.+.++++ .+++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999998 89999999999999999999999998877665543 4332 2344444433332 3589
Q ss_pred cEEEEcCCCc--------------------------cchHHHHHhhh--cCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAV--------------------------HPLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
|+++++.|.. ...+.+++.|+ .+|++|.+++..+
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g 147 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG 147 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence 9999999842 02345666663 4689999986554
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.44 E-value=4e-07 Score=66.28 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=71.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCEEeeCCChHHHHHh---cCCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRDQDEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~---~~~~d~vid~~g 115 (173)
-+|++++|.|+ +++|++.++.+...|++|+++++++++++.... -. .....|-++.+.+++. .+++|+++++.|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG 87 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAG 87 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 36999999998 899999999999999999999999887654322 11 1122344555544443 358999999998
Q ss_pred Ccc-----------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 116 AVH-----------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 116 ~~~-----------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
... ..+.+++.|+ .+|++|.+++..+
T Consensus 88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 137 (242)
T 4b79_A 88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS 137 (242)
T ss_dssp CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence 641 1234556664 5799999986554
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.4e-06 Score=62.61 Aligned_cols=76 Identities=18% Similarity=0.333 Sum_probs=58.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.++.... .|-.+.+.+++. .+++|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999998 9999999999999999999999999888877776764322 344444433332 248999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|++.|.
T Consensus 86 lv~~Ag~ 92 (259)
T 4e6p_A 86 LVNNAAL 92 (259)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999996
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.6e-06 Score=61.85 Aligned_cols=76 Identities=14% Similarity=0.230 Sum_probs=58.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHhc---CCccEEEEc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAAM---GTMDGIIDT 113 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~---~~~d~vid~ 113 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++++.+.+.+..... .|-.+.+.+.+.. +++|++|.+
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 57899999998 9999999999999999999999999988888776664332 2333444443332 479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 92 Ag~ 94 (249)
T 3f9i_A 92 AGI 94 (249)
T ss_dssp CC-
T ss_pred CCC
Confidence 985
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.5e-06 Score=63.11 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=71.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~-------~~~~d~ 109 (173)
..+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.. . ..|-.+.+.+++. .+++|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45788999998 99999999999999999999999999888877766632 2 2244444433332 248999
Q ss_pred EEEcCCCcc--------------------------chHHHHHhhhc----CCEEEEeCCCCC
Q 030694 110 IIDTVSAVH--------------------------PLMPLIGLLKS----QGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~--------------------------~~~~~~~~l~~----~G~~v~~g~~~~ 141 (173)
+|++.|... ..+.+++.++. +|+++.+++..+
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 167 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA 167 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence 999998621 12334455543 589999987554
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.4e-06 Score=62.48 Aligned_cols=101 Identities=13% Similarity=0.199 Sum_probs=72.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++. .+++|+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45789999998 9999999999999999999999999888887776664322 344444333322 248999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
+|++.|... ..+.++..|++ +|+++.+++..+
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 163 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA 163 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence 999999531 12244555544 579999986543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.6e-06 Score=60.59 Aligned_cols=98 Identities=18% Similarity=0.267 Sum_probs=68.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCCcc-
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 118 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~- 118 (173)
.+.+|+|+|+ |.+|..+++.+...|++|+++++++++.+.+.. .+. .. +..+-.+.+.+..+++|++|.+.|...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~-~~~Dl~~~~~~~~~~~D~vi~~ag~~~~ 97 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDI-VVANLEEDFSHAFASIDAVVFAAGSGPH 97 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEE-EECCTTSCCGGGGTTCSEEEECCCCCTT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceE-EEcccHHHHHHHHcCCCEEEECCCCCCC
Confidence 5789999998 999999999999999999999999998888776 555 32 222111333344569999999999641
Q ss_pred ------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 119 ------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 119 ------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
....+++.++ ..++++.+++...
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 134 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT 134 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 0123333443 2368999887543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=4.4e-06 Score=61.62 Aligned_cols=77 Identities=14% Similarity=0.243 Sum_probs=59.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999998 999999999999999999999999998888877676332 2344444433332 248999
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
++++.|..
T Consensus 89 lv~nAg~~ 96 (271)
T 3tzq_B 89 VDNNAAHS 96 (271)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999853
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-05 Score=58.86 Aligned_cols=75 Identities=21% Similarity=0.270 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++. .+++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5789999998 9999999999999999999999999988887776764432 233344333322 2589999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 85 v~nAg~ 90 (247)
T 3rwb_A 85 VNNASI 90 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999995
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.9e-06 Score=60.72 Aligned_cols=103 Identities=15% Similarity=0.040 Sum_probs=73.6
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C-EEeeCCChHHHHHhcC
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SFLVSRDQDEMQAAMG 105 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v~~~~~~~~~~~~~~ 105 (173)
..+... .++++++||.+|+| .|..+..+++. +.+|++++.+++..+.+++.. +. . .++..+..+.. ...+
T Consensus 82 ~~~~~~-~~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~ 157 (248)
T 2yvl_A 82 YIALKL-NLNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEG 157 (248)
T ss_dssp HHHHHT-TCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTT
T ss_pred HHHHhc-CCCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCC
Confidence 334343 44889999999998 68888888888 889999999999888887743 32 1 22221111110 0123
Q ss_pred CccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 106 TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 106 ~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
++|+++...+.+ ..+..+.+.|+++|+++....
T Consensus 158 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 158 IFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred cccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 799999988876 678899999999999988764
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.6e-06 Score=62.40 Aligned_cols=100 Identities=13% Similarity=0.219 Sum_probs=69.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC-C-E--EeeCCChHHHHH-------hc
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA-D-S--FLVSRDQDEMQA-------AM 104 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~-~-~--v~~~~~~~~~~~-------~~ 104 (173)
+|++++|.|+ | ++|++.++.+...|++|+++++++++++.+.+. .+. . . ..|-.+.+.+.+ ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6899999997 5 899999999999999999999998887776553 332 1 1 234444443322 23
Q ss_pred CCccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++|+++++.|... ........++++|+++.+++..+
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~ 150 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG 150 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 58999999988520 01123445677899999986554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.4e-06 Score=62.35 Aligned_cols=100 Identities=16% Similarity=0.201 Sum_probs=71.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+++. .+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4688999998 999999999999999999999999998888877665332 2344444433332 2489999
Q ss_pred EEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
|++.|... ....+++.++ ..|+++.+++..+
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 141 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG 141 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence 99998531 0334445553 3589999886543
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=7.6e-06 Score=59.42 Aligned_cols=75 Identities=21% Similarity=0.344 Sum_probs=57.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE----EeeCCChHHHHHh------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS----FLVSRDQDEMQAA------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~~~------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 5789999998 999999999999999999999999888777666555322 2344444433332 2589999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 90 i~~Ag~ 95 (254)
T 2wsb_A 90 VNSAGI 95 (254)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999985
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.3e-06 Score=60.99 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=69.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+++. .+++|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 578999998 999999999999999999999999998888777564321 2344444333222 25899999
Q ss_pred EcCCCcc-------------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 112 DTVSAVH-------------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 112 d~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
++.|... ..+.++..|+ .+|+++.+++..+
T Consensus 83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~ 138 (235)
T 3l6e_A 83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA 138 (235)
T ss_dssp EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC
T ss_pred ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh
Confidence 9998631 1234455553 4568888876543
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.6e-06 Score=60.73 Aligned_cols=101 Identities=23% Similarity=0.238 Sum_probs=72.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
-+|++++|.|+ +++|++.++.+...|++|+++++++++++...+++ |.+.. .|-++.+.+++. .++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 36899999998 89999999999999999999999988876665433 43322 233344333322 358
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhh---cCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLK---SQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.+++.|. .+|+++.+++..+
T Consensus 87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~ 149 (255)
T 4g81_D 87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS 149 (255)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence 999999999641 2335566662 4689999986654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.2e-06 Score=62.69 Aligned_cols=101 Identities=18% Similarity=0.259 Sum_probs=72.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999998 899999999999999999999999988888777676332 2344444433322 258999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.| +.+|+++.+++..+
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~ 165 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG 165 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence 999998631 122344445 45689999986543
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=4.6e-06 Score=62.99 Aligned_cols=106 Identities=13% Similarity=0.198 Sum_probs=70.5
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC---cchHHHHHHHcC----C-CEEeeCCChHHHHH
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAVERLG----A-DSFLVSRDQDEMQA 102 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~---~~~~~~~~~~~g----~-~~v~~~~~~~~~~~ 102 (173)
.++.....-..+++++|+|+|++|.+++..+...|+ +|+++.|+ .+|.+.+.++++ . ..+++..+.+.+.+
T Consensus 143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~ 222 (315)
T 3tnl_A 143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK 222 (315)
T ss_dssp HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence 344443333478999999999999999999999999 89999999 666666554333 2 23445554444444
Q ss_pred hcCCccEEEEcCCCccc-----hHH-HHHhhhcCCEEEEeC
Q 030694 103 AMGTMDGIIDTVSAVHP-----LMP-LIGLLKSQGKLVLLG 137 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~-----~~~-~~~~l~~~G~~v~~g 137 (173)
....+|++|+|++.... ..- ....++++..++.+-
T Consensus 223 ~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 223 EIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVV 263 (315)
T ss_dssp HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence 45589999999984310 001 234566766666664
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.37 E-value=3.5e-06 Score=61.34 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=58.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---EEeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++.. ...|-.+.+.+++. .+++|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999998 99999999999999999999999998888777655532 22344554433332 248999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
++++.|.
T Consensus 87 lv~nAg~ 93 (248)
T 3op4_A 87 LVNNAGI 93 (248)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.3e-05 Score=57.83 Aligned_cols=75 Identities=21% Similarity=0.301 Sum_probs=57.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHhc---CCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~---~~~d~vid~~g 115 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++....+ .|-.+.+.+++.. +++|++|++.|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5789999998 9999999999999999999999998887766554432222 3444555554443 37999999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 86 ~ 86 (244)
T 3d3w_A 86 V 86 (244)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.2e-06 Score=63.62 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. . ..|-.+.+.+++. .++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5889999998 99999999999999999999999988877665543 222 2 2344454433322 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 112 iD~lvnnAG~ 121 (281)
T 4dry_A 112 LDLLVNNAGS 121 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.36 E-value=4.8e-06 Score=61.30 Aligned_cols=101 Identities=22% Similarity=0.316 Sum_probs=71.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++. .+++|+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 45789999998 9999999999999999999999999988887776775432 244444333332 258999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
+|++.|... ....++..+ +..|+++.+++..+
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~ 163 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG 163 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHH
Confidence 999999631 022344444 34589999986554
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.3e-06 Score=57.87 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHh-cCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-MGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-~~~~d~vid~~g~~ 117 (173)
++++++|+|+|.+|..+++.++..|.+|+++++++++.+.+++ .+...+ .+..+.+.+.+. .+++|+++.+++..
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 3567999999999999999999999999999998887766655 454322 233344444443 35899999999975
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.34 E-value=4.2e-06 Score=62.73 Aligned_cols=76 Identities=22% Similarity=0.283 Sum_probs=57.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 46789999998 99999999999999999999999998877765543 3221 2344454433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 109 id~lvnnAg~ 118 (301)
T 3tjr_A 109 VDVVFSNAGI 118 (301)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999995
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.34 E-value=5e-06 Score=55.13 Aligned_cols=74 Identities=20% Similarity=0.117 Sum_probs=59.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhc-CCccEEEEcCCCc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~-~~~d~vid~~g~~ 117 (173)
.++++|+|+|.+|..+++.+...|.+|+++++++++.+.+++ .+...+ .|..+.+.+.+.. .++|.+|.+++..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 567999999999999999999999999999999999988887 665432 2445555555543 4899999999965
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=8.3e-06 Score=58.06 Aligned_cols=96 Identities=5% Similarity=0.074 Sum_probs=69.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHH-HCCCeEEEEeCCcc-hHHHHHHHcCCC-E--EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAK-AMGVKVTVISTSPS-KKSEAVERLGAD-S--FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~-~~g~~v~~~~~~~~-~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
++++|+|+ |.+|..+++.+. ..|++|++++++++ +.+.+.. .+.. . ..|..+.+.+.+...++|++|++.|..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 56999998 999999999888 89999999999988 7666643 2321 2 235556666777777999999999974
Q ss_pred cc-hHHHHHhhhcC--CEEEEeCCCC
Q 030694 118 HP-LMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 118 ~~-~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
.. ...+++.++.. ++++.+++..
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeece
Confidence 21 34555556543 5888887544
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=5.1e-06 Score=60.65 Aligned_cols=75 Identities=24% Similarity=0.396 Sum_probs=56.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 999999999999999999999999888777766555322 2344444433332 2489999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 84 v~nAg~ 89 (254)
T 1hdc_A 84 VNNAGI 89 (254)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=7.2e-06 Score=60.09 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---EEeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++.. ...|-.+.+.+++. .+++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 99999999999999999999999988877766545422 12344444433332 2489999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 86 v~~Ag~ 91 (260)
T 1nff_A 86 VNNAGI 91 (260)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.32 E-value=5e-06 Score=62.32 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=73.3
Q ss_pred HHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCC
Q 030694 31 YSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 31 ~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~ 106 (173)
..++.... ...++++++|+|+|++|..++..+...|+ +|+++.|+.+|.+.+.+.++.. .+++ .+...+...+
T Consensus 128 ~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---~~~~~~~~~~ 204 (297)
T 2egg_A 128 VQALEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---LAEAETRLAE 204 (297)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---HHHHHHTGGG
T ss_pred HHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---HHHHHhhhcc
Confidence 33444443 22468899999999999999999999998 9999999999887777767652 2322 1233444568
Q ss_pred ccEEEEcCCCccch-----HHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAVHPL-----MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~~~~-----~~~~~~l~~~G~~v~~g~ 138 (173)
+|++|+|++..... .-....++++..++.+..
T Consensus 205 aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 205 YDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 99999999976310 111245677777777764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-05 Score=58.88 Aligned_cols=75 Identities=17% Similarity=0.305 Sum_probs=58.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ +++|..+++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++. .+++|++
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 87 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL 87 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999998 8999999999999999999999999998888776764322 344444333322 2489999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 88 i~~Ag~ 93 (261)
T 3n74_A 88 VNNAGI 93 (261)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999985
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-05 Score=58.43 Aligned_cols=75 Identities=19% Similarity=0.367 Sum_probs=56.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+|... ..|-.+.+.+++. .+++|++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999998 999999999999999999999999888877766556322 2344454433332 247999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 84 ~Ag~ 87 (245)
T 1uls_A 84 YAGI 87 (245)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.7e-05 Score=58.20 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999999988776654433 4322 1344444433332 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 92 ~id~lv~nAg~ 102 (267)
T 1iy8_A 92 RIDGFFNNAGI 102 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 89999999984
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.2e-05 Score=59.09 Aligned_cols=100 Identities=23% Similarity=0.350 Sum_probs=70.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 4789999998 999999999999999999999999988887766554221 2344444433322 2479999
Q ss_pred EEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|++.|... ..+.++..++.+|+++.+++..+
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 140 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG 140 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 99988421 11233344433789999986554
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.8e-05 Score=58.17 Aligned_cols=76 Identities=24% Similarity=0.318 Sum_probs=56.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .+
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999998 99999999999999999999999988776654433 5332 2344444433322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 99 ~iD~lvnnAg~ 109 (267)
T 1vl8_A 99 KLDTVVNAAGI 109 (267)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 89999999985
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.4e-05 Score=52.49 Aligned_cols=76 Identities=17% Similarity=0.202 Sum_probs=57.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHh-cCCccEEEEcCCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~~~d~vid~~g~~~ 118 (173)
+.+++|+|+|.+|...++.+...|.+|+++++++++.+.+.+.++...+. +..+.+.+.+. ..++|++|.+++...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 46899999999999999999999999999999988888777645653322 33344444333 458999999998763
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.30 E-value=6e-06 Score=60.81 Aligned_cols=100 Identities=14% Similarity=0.307 Sum_probs=69.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|+..++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .+++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 99999999999999999999999988877765544 4322 2344444433332 2589
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
|++|++.|... ..+.++..| +.+|+++.+++..+
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~ 143 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA 143 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence 99999998531 112344444 35689999986543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-05 Score=58.74 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------c-CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------M-GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~-~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. . ++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999988776554433 4322 2344444433332 2 68
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999985
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.1e-05 Score=57.15 Aligned_cols=75 Identities=15% Similarity=0.255 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
.+++++|.|+ |++|...++.+...|++|+++++++ ++.+...+..+... ..|-.+.+.+++. .+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999999999999999999987 66554222255332 2344444433332 358999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|++.|.
T Consensus 86 lv~nAg~ 92 (249)
T 2ew8_A 86 LVNNAGI 92 (249)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.29 E-value=4.2e-06 Score=61.88 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=70.0
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
..++.....--++++++|+|+|++|..+++.+...|++|+++.++.++.+.+.+.++...-++..+.+.+.+ +++|++
T Consensus 107 ~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~Div 184 (271)
T 1nyt_A 107 LSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLI 184 (271)
T ss_dssp HHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEE
T ss_pred HHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEE
Confidence 334444433246899999999999999999999999999999999988877766565310011111111111 689999
Q ss_pred EEcCCCccchH---HHHHhhhcCCEEEEeCCC
Q 030694 111 IDTVSAVHPLM---PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 111 id~~g~~~~~~---~~~~~l~~~G~~v~~g~~ 139 (173)
++|+|....-. -....++++..++.+...
T Consensus 185 Vn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 216 (271)
T 1nyt_A 185 INATSSGISGDIPAIPSSLIHPGIYCYDMFYQ 216 (271)
T ss_dssp EECCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred EECCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 99999763200 012335666677777643
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=98.29 E-value=1e-05 Score=57.26 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=71.5
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhcCCc
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~ 107 (173)
+.... ++++++||-+|+|. |..+..+++. +.+|++++.+++..+.+++.. |.. .++..+..+... ....+
T Consensus 48 l~~l~-~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~ 123 (204)
T 3njr_A 48 LAALA-PRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLP 123 (204)
T ss_dssp HHHHC-CCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCC
T ss_pred HHhcC-CCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCC
Confidence 33434 48899999999974 7777888887 889999999999888887642 422 233333223221 12479
Q ss_pred cEEEEcCCCcc-chHHHHHhhhcCCEEEEeCCC
Q 030694 108 DGIIDTVSAVH-PLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 108 d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~ 139 (173)
|+++...+... .+..+.+.|+|+|+++.....
T Consensus 124 D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 124 EAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence 99997665432 577888999999999887643
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.3e-05 Score=59.75 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=59.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CC-CEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA-DSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~-~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++++++|+|+ |++|..++..+...|++|+++++++++.+.+.+.+ +. ....|..+.+.+.+....+|++|+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 46899999995 99999999999999999999999988777665433 32 23346666666666677899999999
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 197 g~ 198 (287)
T 1lu9_A 197 AI 198 (287)
T ss_dssp CT
T ss_pred Cc
Confidence 74
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-05 Score=59.12 Aligned_cols=75 Identities=16% Similarity=0.295 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C---CC-E--EeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G---AD-S--FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g---~~-~--v~~~~~~~~~~~~-------~ 104 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ + .. . ..|-.+.+.+++. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4688999998 99999999999999999999999988877765544 2 11 1 2344444433332 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|++.|.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 489999999985
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-05 Score=58.79 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=56.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+. ... ..|-.+.+.+++. .+++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 999999999999999999999999998887776543 221 2344444333322 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 85 d~lv~nAg~ 93 (257)
T 3imf_A 85 DILINNAAG 93 (257)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2e-05 Score=57.23 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ |... ..|-.+.+.+++. .+++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 99999999999999999999999988777665433 4322 2344444433322 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 86 d~lv~nAg~ 94 (247)
T 2jah_A 86 DILVNNAGI 94 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.8e-05 Score=57.86 Aligned_cols=75 Identities=16% Similarity=0.277 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 99999999999999999999999988776654433 5332 1344444433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 86 id~lv~~Ag~ 95 (263)
T 3ai3_A 86 ADILVNNAGT 95 (263)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-05 Score=59.33 Aligned_cols=75 Identities=16% Similarity=0.188 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CE----EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DS----FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----v~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +. .. ..|-.+.+.+++. .+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999998 99999999999999999999999988766654432 31 11 1344444433322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 111 ~iD~vi~~Ag~ 121 (279)
T 1xg5_A 111 GVDICINNAGL 121 (279)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999984
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.6e-05 Score=58.19 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+... . ..|-.+.+.+++. .+++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 99999999999999999999999988877766544321 1 2344444433332 2489999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 91 v~~Ag~ 96 (263)
T 3ak4_A 91 CANAGV 96 (263)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999984
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.26 E-value=7.4e-06 Score=59.77 Aligned_cols=75 Identities=25% Similarity=0.259 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHhc------CCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM------GTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~------~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ |... ..|-.+.+.+++.. +++|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence 5789999998 89999999999999999999999999887776544 3221 23444443332221 5899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 86 ~lv~nAg~ 93 (252)
T 3h7a_A 86 VTIFNVGA 93 (252)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999995
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.7e-05 Score=58.14 Aligned_cols=99 Identities=14% Similarity=0.190 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-----C-E--EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----D-S--FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-----~-~--v~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+.. . . ..|-.+.+.+++. .+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999999999999999998876655443321 1 1 2344444333322 24
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhhc-----CCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 140 (173)
++|++|++.|... ....+++.+++ .|+++.+++..
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 142 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 142 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcc
Confidence 7999999998531 11234455543 58999988654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.9e-05 Score=57.70 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------c-CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------M-GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~-~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. . ++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999988766654433 3221 2344444433332 2 68
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 88 id~lv~~Ag~ 97 (260)
T 2ae2_A 88 LNILVNNAGI 97 (260)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-05 Score=55.73 Aligned_cols=75 Identities=23% Similarity=0.300 Sum_probs=56.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHhc---CCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~---~~~d~vid~~g 115 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.++...... .|-.+.+.+++.. +++|++|++.|
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5789999998 9999999999999999999999998877766554432222 3445555555543 36899999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 86 ~ 86 (244)
T 1cyd_A 86 L 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-05 Score=58.12 Aligned_cols=76 Identities=17% Similarity=0.254 Sum_probs=55.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----C--CC-EEeeC--CChHHHHHh-------
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G--AD-SFLVS--RDQDEMQAA------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g--~~-~v~~~--~~~~~~~~~------- 103 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ + .. ...|- .+.+..++.
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 35789999998 99999999999999999999999988877665433 2 11 12333 333322222
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2489999999985
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-05 Score=58.80 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++. .+++|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999998 9999999999999999999999998888777665654322 233444333222 2479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 85 v~~Ag~ 90 (253)
T 1hxh_A 85 VNNAGI 90 (253)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.9e-05 Score=57.58 Aligned_cols=74 Identities=19% Similarity=0.274 Sum_probs=54.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .+++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 578999998 99999999999999999999999988766654433 4321 2344444433332 24899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 82 ~lv~nAg~ 89 (256)
T 1geg_A 82 VIVNNAGV 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-05 Score=59.19 Aligned_cols=77 Identities=16% Similarity=0.233 Sum_probs=57.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. . ..|-.+.+.+++. .++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999998 99999999999999999999999988877765543 322 2 2344444433332 248
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|++.|..
T Consensus 110 iD~lvnnAg~~ 120 (276)
T 3r1i_A 110 IDIAVCNAGIV 120 (276)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999863
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.7e-05 Score=55.82 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++.... .|-.+.+.+++. .+++|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999998 9999999999999999999999998887777664542222 344444333222 24899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 84 ~~Ag~ 88 (234)
T 2ehd_A 84 NNAGV 88 (234)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99984
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.6e-05 Score=59.21 Aligned_cols=76 Identities=24% Similarity=0.314 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CCE---EeeCCCh-HHHHH-------hc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-ADS---FLVSRDQ-DEMQA-------AM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~---v~~~~~~-~~~~~-------~~ 104 (173)
..+++++|.|+ |++|+.+++.+...|++|+++++++++.+.+.+++ + ... ..|-.+. +.++. ..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 35789999998 99999999999999999999999998876665543 2 111 2344443 32222 23
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|++.|.
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 589999999995
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-05 Score=59.12 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=74.5
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+...++..+.+...--.|++++|+|.| .+|..+++++...|++|++..+... .
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~ 197 (285)
T 3l07_A 139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------D 197 (285)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 35677777778888888766789999999985 4899999999999999988765322 1
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+.....|++|.++|.+..+.. ..+++|..++.+|...
T Consensus 198 L~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 198 LKSHTTKADILIVAVGKPNFITA--DMVKEGAVVIDVGINH 236 (285)
T ss_dssp HHHHHTTCSEEEECCCCTTCBCG--GGSCTTCEEEECCCEE
T ss_pred HHHhcccCCEEEECCCCCCCCCH--HHcCCCcEEEEecccC
Confidence 22345578999999998855443 4579999999998643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.1e-05 Score=57.91 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=56.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++..... .|-.+.+.+++. .+++|++|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999998 9999999999999999999999998888777665542222 344444433322 24899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 88 ~nAg~ 92 (270)
T 1yde_A 88 NNAGH 92 (270)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99985
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.23 E-value=9.3e-06 Score=59.57 Aligned_cols=75 Identities=11% Similarity=0.102 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.++++||.|+ |++|...++.+...|++|+++++++++.....+..+...+ .|-.+.+.+++. .+++|++|+
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4688999998 9999999999999999999999998775444433564322 344444333322 258999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 106 nAg~ 109 (260)
T 3gem_A 106 NASE 109 (260)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9985
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.3e-05 Score=58.14 Aligned_cols=101 Identities=19% Similarity=0.282 Sum_probs=70.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++. ... ..|-.+.+.+++. .++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35789999998 999999999999999999999999988877766542 221 2344444333222 258
Q ss_pred ccEEEEcCCCcc--------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH--------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~ 168 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSING 168 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhh
Confidence 999999998521 1223444443 4689999986544
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=7.8e-06 Score=65.18 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.-.|++|.|+|.|.+|..+++.++..|++|++++++..+...+.. .|.. +. .+.+.....|+++.+++....
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~-~G~~-~~------~l~ell~~aDiVi~~~~t~~l 345 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM-EGYR-VV------TMEYAADKADIFVTATGNYHV 345 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECSSSSCS
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHH-cCCE-eC------CHHHHHhcCCEEEECCCcccc
Confidence 357999999999999999999999999999999998876434433 4543 21 244566789999999977655
Q ss_pred h-HHHHHhhhcCCEEEEeCCCC
Q 030694 120 L-MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 ~-~~~~~~l~~~G~~v~~g~~~ 140 (173)
+ ...+..|+++..++.+|...
T Consensus 346 I~~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 346 INHDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp BCHHHHHHCCTTEEEEECSSSS
T ss_pred cCHHHHhhCCCCcEEEEcCCCc
Confidence 5 36788999999999998643
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.22 E-value=2e-05 Score=57.66 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+.+. .++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35789999998 99999999999999999999999998877665543 3221 2344444433322 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999986
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-05 Score=59.28 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=74.8
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+...++..+.+...--.|++++|+|.| .+|..+++++...|++|++..+....++ +
T Consensus 144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l 204 (300)
T 4a26_A 144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------M 204 (300)
T ss_dssp CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------H
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------h
Confidence 4777878888888888776799999999985 5899999999999999999876433222 0
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|++|.++|.+..+.. ..+++|..++.+|..
T Consensus 205 ~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 205 IDYLRTADIVIAAMGQPGYVKG--EWIKEGAAVVDVGTT 241 (300)
T ss_dssp HHHHHTCSEEEECSCCTTCBCG--GGSCTTCEEEECCCE
T ss_pred hhhhccCCEEEECCCCCCCCcH--HhcCCCcEEEEEecc
Confidence 1234468999999998855543 347999999999853
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-05 Score=58.73 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCC-E--EeeCCChHHHHHhcC------C
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQAAMG------T 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~------~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|-.+.+.+++... +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4789999998 99999999999999999999999988776655433 312 1 234445443333221 4
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 86 id~lv~~Ag~ 95 (260)
T 2z1n_A 86 ADILVYSTGG 95 (260)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-05 Score=58.50 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CC-E--EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-AD-S--FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~-~--v~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ + .. . ..|-.+.+.+++. .+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 35789999998 99999999999999999999999988877665543 2 12 1 2244444333322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999985
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.7e-05 Score=57.92 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHc----CCCEE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERL----GADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++ .+.+.+.+ +.... .|-.+.+.+++. .+
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4688999998 999999999999999999999998876 55554433 43322 244444333322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 83 ~iD~lv~~Ag~ 93 (260)
T 1x1t_A 83 RIDILVNNAGI 93 (260)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999985
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.8e-06 Score=61.29 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=69.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.++++|+|+ |.+|..+++.+...| ++|+++++++++...+.. .+.. ...|..+.+.+.+...++|++|.+.|....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 568999998 999999999999999 799999999876543322 1221 123555667777777899999999987632
Q ss_pred ---hHHHHHhhhcC--CEEEEeCCCC
Q 030694 120 ---LMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 120 ---~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
...+++.++.. +++|.+++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecce
Confidence 23455656543 5899887644
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=98.21 E-value=6.8e-06 Score=65.29 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=74.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.-.|++|.|+|.|.+|..+++.++..|++|++++++..+...+.. .|.. +. .+.+.....|+++.+.+....
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~-~g~~-~~------~l~ell~~aDiVi~~~~t~~l 325 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGFN-VV------TLDEIVDKGDFFITCTGNVDV 325 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECCSSSSS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH-cCCE-ec------CHHHHHhcCCEEEECCChhhh
Confidence 367999999999999999999999999999999999876544444 5542 21 244566789999999887765
Q ss_pred hH-HHHHhhhcCCEEEEeCCCC
Q 030694 120 LM-PLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 ~~-~~~~~l~~~G~~v~~g~~~ 140 (173)
+. ..+..|+++..++.+|...
T Consensus 326 I~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 326 IKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp BCHHHHTTCCTTCEEEECSSTT
T ss_pred cCHHHHhhcCCCcEEEEeCCCC
Confidence 54 6778899999999998643
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-05 Score=56.64 Aligned_cols=75 Identities=20% Similarity=0.321 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|+++++ ++++.+.+.+++ +... ..|-.+.+.+++. .++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 99999999999999999999998 776665554333 4322 2344444433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 2uvd_A 83 VDILVNNAGV 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.21 E-value=8.3e-06 Score=59.62 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999988776665533 4322 2344444333322 248
Q ss_pred ccEEEEcCCCcc------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.+++.|+. +|+++.+++..+
T Consensus 90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 150 (256)
T 3gaf_A 90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG 150 (256)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Confidence 999999998531 12234444533 579999986543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.7e-06 Score=60.85 Aligned_cols=100 Identities=14% Similarity=0.224 Sum_probs=68.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHHHHh---cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQAA---MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~---~~~~d~ 109 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+...+++ +... ..|-.+.+.+++. .+++|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 5789999998 99999999999999999999999988766654433 1111 2244444444433 358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.| +..|+++.+++..+
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 147 (267)
T 3t4x_A 89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA 147 (267)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh
Confidence 999998531 122344555 34589999986543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.4e-05 Score=58.87 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ...|-.+.+.+++. .++
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999988776655433 322 12344454433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 106 iD~lvnnAg~ 115 (270)
T 3ftp_A 106 LNVLVNNAGI 115 (270)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.20 E-value=5.9e-06 Score=60.78 Aligned_cols=77 Identities=18% Similarity=0.273 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCE---EeeCCChHHHHH-------hcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADS---FLVSRDQDEMQA-------AMG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~-------~~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++ .+... ..|-.+.+.+++ ..+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 9999999999999999999999998877665543 24322 124344332222 235
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
++|++|++.|..
T Consensus 98 ~id~lv~nAg~~ 109 (266)
T 4egf_A 98 GLDVLVNNAGIS 109 (266)
T ss_dssp SCSEEEEECCCC
T ss_pred CCCEEEECCCcC
Confidence 899999999853
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.1e-05 Score=59.12 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=56.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45889999998 89999999999999999999999988877665543 3222 2344444433322 358
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 89 id~lv~nAg~ 98 (264)
T 3ucx_A 89 VDVVINNAFR 98 (264)
T ss_dssp CSEEEECCCS
T ss_pred CcEEEECCCC
Confidence 9999999975
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-05 Score=56.69 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=55.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---EEeeCCChHHHHHhc----CCccEEEEcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAAM----GTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~----~~~d~vid~~g 115 (173)
++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++.. ...|-.+.+.+++.. ..+|+++++.|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 46899998 99999999999999999999999999988887766532 223445554444433 35699999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 82 ~ 82 (230)
T 3guy_A 82 S 82 (230)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.4e-05 Score=58.63 Aligned_cols=100 Identities=13% Similarity=0.201 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCC--CE--EeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGA--DS--FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~--~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~--~~--v~~~~~~~~~~~~-------~ 104 (173)
.+++++|.|+ |. +|+..++.+...|++|++++++++..+.+.+ ..+. -. ..|-.+.+.+++. .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5789999997 66 9999999999999999999988754444433 2332 11 2343443333222 2
Q ss_pred CCccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++|+++.+.|... ....++..++++|+++.+++..+
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 151 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG 151 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence 58999999998531 12234455667899999986543
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.4e-05 Score=60.40 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C-E--EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-S--FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~--v~~~~~~~~~~~~-------~~ 105 (173)
.++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +. . . ..|-.+.+.+++. .+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5789999998 99999999999999999999999998877665533 22 1 1 2344444433322 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 89999999994
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.4e-05 Score=55.31 Aligned_cols=91 Identities=21% Similarity=0.313 Sum_probs=63.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCcc----
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH---- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~---- 118 (173)
+|+|+|+ |.+|..+++.+...|.+|++++|++++...+. -+...+ .|..+.+. +...++|++|.+.|...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 6999998 99999999999999999999999987766543 122221 12222222 44568999999998741
Q ss_pred ----chHHHHHhhhcC--CEEEEeCCC
Q 030694 119 ----PLMPLIGLLKSQ--GKLVLLGAP 139 (173)
Q Consensus 119 ----~~~~~~~~l~~~--G~~v~~g~~ 139 (173)
....+++.++.. ++++.+++.
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 224566666554 688888754
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=3.8e-05 Score=56.43 Aligned_cols=75 Identities=17% Similarity=0.308 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-E--EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-S--FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~-------~~~~d 108 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++. . . ..|-.+.+.+++. .+++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999999999988776666554542 1 1 2344444433332 24899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 95 ~li~~Ag~ 102 (278)
T 2bgk_A 95 IMFGNVGV 102 (278)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999984
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.1e-05 Score=62.18 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=72.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
..+|+|+|+|.+|..+++.+.. ..+|++.+++.++++.+++ ......+|..+.+.+.+...+.|+|++|+|......-
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v 93 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKS 93 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchH
Confidence 3479999999999998887754 5689999999988887766 4433346667777777888899999999997644555
Q ss_pred HHHhhhcCCEEEEeCC
Q 030694 123 LIGLLKSQGKLVLLGA 138 (173)
Q Consensus 123 ~~~~l~~~G~~v~~g~ 138 (173)
+-.|++.+-.++.++.
T Consensus 94 ~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 94 IKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHTCEEEECCC
T ss_pred HHHHHhcCcceEeeec
Confidence 5567777778887763
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-05 Score=58.58 Aligned_cols=76 Identities=24% Similarity=0.287 Sum_probs=57.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~---v~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++.. .. ..|-.+.+.+++. .+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 9999999999999999999999999988777665531 11 2344444333222 35
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999985
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-05 Score=53.70 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=70.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
..+++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++. .|.. ..+..+..+......+.+|+++.
T Consensus 22 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEE
Confidence 348899999999984 88888888876 56999999999988888763 2322 23332222333222268999997
Q ss_pred cCCCcc--chHHHHHhhhcCCEEEEeCC
Q 030694 113 TVSAVH--PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 113 ~~g~~~--~~~~~~~~l~~~G~~v~~g~ 138 (173)
...... .+..+.+.|+|+|+++....
T Consensus 101 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 101 GGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 665442 57889999999999987764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.3e-05 Score=58.89 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-EE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v---~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|-.+.+.+++. .+
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 89999999999999999999999988876665533 221 21 344444433322 35
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|+++++.|.
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999986
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.9e-05 Score=56.69 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=68.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh------cCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSF---LVSRDQDEMQAA------MGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~------~~~~ 107 (173)
-.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +.... .|-.+.+...+. .+++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 35789999998 99999999999999999999999988877665543 43221 233333222221 1589
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
|++|++.|... ..+.++..| +..|+++.+++..+
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~ 171 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ 171 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence 99999999520 122344444 34689999986543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=2.3e-05 Score=57.59 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=69.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC-E--EeeCCChHHHHHh-------cCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
-+|++++|.|+ +++|++.++.+...|++|++.++++++.+.+.+ +.+.. . ..|-.+.+..++. .+++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 36899999998 899999999999999999999998876544332 13422 1 2344444433322 3589
Q ss_pred cEEEEcCCCcc------------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH------------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
|+++++.|... ..+.+++.|+ .+|++|.+++..+
T Consensus 85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 143 (258)
T 4gkb_A 85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA 143 (258)
T ss_dssp CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence 99999998631 1334556664 4699999986543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-05 Score=57.86 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ |... ..|-.+.+.+++. .+++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 99999999999999999999999988766554433 4322 2344444333322 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 101 D~lv~~Ag~ 109 (277)
T 2rhc_B 101 DVLVNNAGR 109 (277)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=9.7e-06 Score=59.30 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
++++++|.|+ |++|..+++.+.. .|++|++++++.++.+.+.+.+ +.. . ..|-.+.+.+++. .++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999998 9999999998888 8999999999987766554433 321 2 2344444333332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 83 id~li~~Ag~ 92 (276)
T 1wma_A 83 LDVLVNNAGI 92 (276)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999985
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-05 Score=60.49 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=67.9
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC---cchHHHHHHHcC----CC-EEeeCCChHHHHH
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAVERLG----AD-SFLVSRDQDEMQA 102 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~---~~~~~~~~~~~g----~~-~v~~~~~~~~~~~ 102 (173)
.++.....-..+++++|+|+|++|.+++..+...|+ +|+++.|+ .+|.+.+.++++ .. ..++..+.++..+
T Consensus 137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~ 216 (312)
T 3t4e_A 137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE 216 (312)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence 334443333468999999999999999999999999 89999999 666655544343 21 2344444322233
Q ss_pred hcCCccEEEEcCCCcc--chHH----HHHhhhcCCEEEEeC
Q 030694 103 AMGTMDGIIDTVSAVH--PLMP----LIGLLKSQGKLVLLG 137 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~--~~~~----~~~~l~~~G~~v~~g 137 (173)
...++|++|+|++... .-.. -...++++..+..+-
T Consensus 217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 3447899999998641 0011 124566666666664
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.17 E-value=2.4e-05 Score=57.88 Aligned_cols=77 Identities=19% Similarity=0.295 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-------------CcchHHHHHHH---cCCCE---EeeCCChHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAVER---LGADS---FLVSRDQDEM 100 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-------------~~~~~~~~~~~---~g~~~---v~~~~~~~~~ 100 (173)
-.+++++|.|+ +++|+..++.+...|++|+++++ ++++.+.+.+. .|... ..|-.+.+.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 46889999998 99999999999999999999987 45555554442 23222 2344454433
Q ss_pred HHh-------cCCccEEEEcCCCc
Q 030694 101 QAA-------MGTMDGIIDTVSAV 117 (173)
Q Consensus 101 ~~~-------~~~~d~vid~~g~~ 117 (173)
++. .+++|++|++.|..
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 332 25899999999863
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.7e-05 Score=56.55 Aligned_cols=76 Identities=13% Similarity=0.267 Sum_probs=55.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 35789999998 99999999999999999999999988776654433 4321 2344444333222 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 109 iD~li~~Ag~ 118 (272)
T 1yb1_A 109 VSILVNNAGV 118 (272)
T ss_dssp CSEEEECCCC
T ss_pred CcEEEECCCc
Confidence 9999999985
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.8e-05 Score=57.55 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC--CEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
..+++++|+|+|++|.+++..+...|+ +|+++.|+.+|.+.+.+.++. .......+ .. ..++|++|+|++..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~--~~~~DivInaTp~g 192 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LE--GQSFDIVVNATSAS 192 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GT--TCCCSEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hc--ccCCCEEEECCCCC
Confidence 468999999999999999999999997 999999999998887776664 22222211 11 15899999999864
Q ss_pred cch---HHHHHhhhcCCEEEEeCC
Q 030694 118 HPL---MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 ~~~---~~~~~~l~~~G~~v~~g~ 138 (173)
..- .-....++++..++.+-.
T Consensus 193 m~~~~~~i~~~~l~~~~~V~DlvY 216 (272)
T 3pwz_A 193 LTADLPPLPADVLGEAALAYELAY 216 (272)
T ss_dssp GGTCCCCCCGGGGTTCSEEEESSC
T ss_pred CCCCCCCCCHHHhCcCCEEEEeec
Confidence 110 011245778888777754
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.7e-06 Score=60.93 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++++.+.. -... ...|-.+.+.+++. .+++|++|+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4789999998 999999999999999999999998776554322 1111 12344444333322 258999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 94 nAg~ 97 (266)
T 3p19_A 94 NAGM 97 (266)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9996
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.5e-05 Score=59.06 Aligned_cols=75 Identities=23% Similarity=0.307 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSF---LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~~~ 107 (173)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.... .|-.+.+.+++. .+++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999998887776655 22221 233344333322 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 87 D~lvnnAg~ 95 (280)
T 3tox_A 87 DTAFNNAGA 95 (280)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.5e-05 Score=56.23 Aligned_cols=73 Identities=23% Similarity=0.364 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++ +.+.+.++. .. .|-.+.+.+++. .+++|++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 999999999999999999999999887 555444542 32 244444333222 25899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 83 ~~Ag~ 87 (256)
T 2d1y_A 83 NNAAI 87 (256)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99985
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.8e-05 Score=57.34 Aligned_cols=99 Identities=19% Similarity=0.330 Sum_probs=67.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHH---cCCCEE---eeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVER---LGADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|++++++. ++.+.+.+. .|.... .|-.+.+.+++. .+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46889999998 9999999999999999999986654 444444332 343322 344444433322 24
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++|++|++.|... ..+.+++.|+++|+++.+++.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 8999999998531 133455667778999999764
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.5e-05 Score=57.03 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=74.7
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+...++..+.++..--.|++++|+|. +.+|..+++++...|++|++..+....+
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L-------------------- 198 (286)
T 4a5o_A 139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL-------------------- 198 (286)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH--------------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH--------------------
Confidence 3567777777888888877678999999998 5589999999999999999886543222
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.....|++|.++|.+..+.. ..+++|..++.+|...
T Consensus 199 -~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 199 -ADHVSRADLVVVAAGKPGLVKG--EWIKEGAIVIDVGINR 236 (286)
T ss_dssp -HHHHHTCSEEEECCCCTTCBCG--GGSCTTCEEEECCSCS
T ss_pred -HHHhccCCEEEECCCCCCCCCH--HHcCCCeEEEEecccc
Confidence 2233468999999998855543 4579999999999653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.16 E-value=3.1e-05 Score=56.66 Aligned_cols=75 Identities=13% Similarity=0.244 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ |... ..|-.+.+.+++. .+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999988776655433 3222 2344444333222 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 86 d~lv~nAg~ 94 (262)
T 1zem_A 86 DFLFNNAGY 94 (262)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-05 Score=60.30 Aligned_cols=89 Identities=21% Similarity=0.377 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ .|.... + ..++....|+++.+++...
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~~----~---l~ell~~aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKE-VNGKFV----D---LETLLKESDVVTIHVPLVEST 210 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-TTCEEC----C---HHHHHHHCSEEEECCCCSTTT
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhh-cCcccc----C---HHHHHhhCCEEEEecCCChHH
Confidence 35889999999999999999999999999999998876 45555 776421 2 2234447899999988542
Q ss_pred --ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|++++.++.++.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred hhhcCHHHHhcCCCCeEEEECCC
Confidence 23 357788999999999985
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-05 Score=58.84 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=74.0
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+....+..+.+...--+|++++|+|+| .+|.-+++++...|++|++..+... .
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~ 201 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------H 201 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc---------------------c
Confidence 35677777777777777765789999999997 5899999999999999998864422 2
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|++|.++|.+..+... .+++|..++.+|..
T Consensus 202 L~~~~~~ADIVI~Avg~p~~I~~~--~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 202 LDEEVNKGDILVVATGQPEMVKGE--WIKPGAIVIDCGIN 239 (301)
T ss_dssp HHHHHTTCSEEEECCCCTTCBCGG--GSCTTCEEEECCCB
T ss_pred HHHHhccCCEEEECCCCcccCCHH--HcCCCcEEEEccCC
Confidence 233455789999999998644433 37899999999964
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.15 E-value=3.5e-05 Score=56.85 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=56.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
-.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ |.... .|-.+.+.+++. .++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 35789999998 99999999999999999999999988877665543 43322 233444333222 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|+++++.|.
T Consensus 104 iD~lv~nAg~ 113 (271)
T 4ibo_A 104 VDILVNNAGI 113 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999995
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.15 E-value=2.6e-05 Score=56.82 Aligned_cols=101 Identities=15% Similarity=0.210 Sum_probs=67.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----C-C-CEE--eeCCChHHHHHh-------
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----G-A-DSF--LVSRDQDEMQAA------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g-~-~~v--~~~~~~~~~~~~------- 103 (173)
..+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ + . ... .|-.+.+.+++.
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35789999998 99999999999999999999999998877665533 2 1 112 344444333222
Q ss_pred cCCccEEEEcCCCcc------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 104 MGTMDGIIDTVSAVH------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 104 ~~~~d~vid~~g~~~------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
.+++|++|++.|... ..+.++..| +..|+++.+++..+
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 148 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAA 148 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHh
Confidence 258999999998621 122334444 34689999986554
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.4e-05 Score=58.38 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=68.3
Q ss_pred CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCCcchHHHH---HHHcCCCEE--eeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSKKSEA---VERLGADSF--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~--~G~~a~~~~~~~g~~v~~~~~~~~~~~~~---~~~~g~~~v--~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |+ +|+..++.+...|++|++++++++..+.+ .+..+.... .|-.+.+.+++. .+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46889999997 66 99999999999999999999986533333 332443222 344444333332 25
Q ss_pred CccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++|++|++.|... ..+.++..|+++|+++.+++..+
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 8999999998531 12345566777899999886543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=5.2e-05 Score=56.44 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=66.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH-HHHHH---HcCCCEE---eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAVE---RLGADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~-~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
.++++||.|+ |++|...++.+...|++|+++++++++. +.+.+ ..|.... .|-.+.+.+++. .++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999999999987642 22222 1343322 244444333322 248
Q ss_pred ccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|++|++.|... ..+.++..|+++|+++.+++..
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 999999987521 1234455667789999998643
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=2.2e-05 Score=58.04 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=67.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------cchHHHHHHH---cCCCE---EeeCCChHHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAVER---LGADS---FLVSRDQDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~------------~~~~~~~~~~---~g~~~---v~~~~~~~~~~ 101 (173)
-.++++||.|+ |++|..+++.+...|++|++++++ .++.+.+... .+... ..|-.+.+.++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 35789999998 999999999999999999999987 4444433321 34322 23444444333
Q ss_pred Hh-------cCCccEEEEcCCCcc-----------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 102 AA-------MGTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 102 ~~-------~~~~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+. .+++|++|++.|... ..+.++..|+++|+++.+++..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 156 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA 156 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence 22 248999999998631 1223445566789999998643
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=2e-06 Score=64.88 Aligned_cols=118 Identities=16% Similarity=0.152 Sum_probs=80.0
Q ss_pred cchhhHHHHHHHHHHh---------hCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--
Q 030694 21 APLLCAGITVYSPLRF---------YGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-- 88 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~---------~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-- 88 (173)
..+||+...+...+.+ ...--.|++++|+|+|. +|..+++++...|++|++..++..+.....+.++.
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~ 225 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK 225 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence 4677877777777777 34335799999999974 69999999999999999998874433221111332
Q ss_pred CEE--eeCCChHHHHHhcCCccEEEEcCCCccc-hHHHHHhhhcCCEEEEeCCCC
Q 030694 89 DSF--LVSRDQDEMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 89 ~~v--~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 140 (173)
... +...+.+.+.+.....|++|.++|.+.. +...| +++|..++.+|...
T Consensus 226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~--vk~GavVIDVgi~r 278 (320)
T 1edz_A 226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEY--IKEGAVCINFACTK 278 (320)
T ss_dssp CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTT--SCTTEEEEECSSSC
T ss_pred ccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHH--cCCCeEEEEcCCCc
Confidence 111 0001124455556689999999998854 44333 68888899998654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=2.7e-05 Score=57.54 Aligned_cols=76 Identities=20% Similarity=0.247 Sum_probs=55.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+...+++ +... ..|-.+.+.+++. .+
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 89999999999999999999999988766554433 4332 2344444333222 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 105 ~id~lv~nAg~ 115 (277)
T 4fc7_A 105 RIDILINCAAG 115 (277)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcC
Confidence 89999999984
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.5e-05 Score=57.75 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CE---EeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DS---FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 104 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+.+.+++. .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5789999998 99999999999999999999999988876665543 22 11 1244444333222 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 589999999996
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=3.2e-05 Score=56.02 Aligned_cols=75 Identities=17% Similarity=0.310 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .+++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999999999999999987766554432 4322 1344444433332 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 90 d~vi~~Ag~ 98 (255)
T 1fmc_A 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.3e-05 Score=56.61 Aligned_cols=97 Identities=23% Similarity=0.126 Sum_probs=69.1
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
...+++++||.+|+| .|..+..+++. +.+|++++.+++..+.+++.+ |.. .++..+..+.. ...+.+|+|+.
T Consensus 73 l~~~~~~~vLdiG~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~ 149 (210)
T 3lbf_A 73 LELTPQSRVLEIGTG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIV 149 (210)
T ss_dssp TTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred cCCCCCCEEEEEcCC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEE
Confidence 344889999999997 47777777776 789999999999888887743 322 22222211111 11358999998
Q ss_pred cCCCccchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
........+.+.+.|+|||+++..-
T Consensus 150 ~~~~~~~~~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 150 TAAPPEIPTALMTQLDEGGILVLPV 174 (210)
T ss_dssp SSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred ccchhhhhHHHHHhcccCcEEEEEE
Confidence 8776656678899999999987763
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=2.4e-05 Score=54.99 Aligned_cols=99 Identities=15% Similarity=0.134 Sum_probs=69.2
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vi 111 (173)
..++++++||.+|+|. |..+..+++... .+|++++.+++..+.+++.. |.+ .++..+..+... ..+.+|+++
T Consensus 36 l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~ 113 (204)
T 3e05_A 36 LRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVF 113 (204)
T ss_dssp TTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEE
T ss_pred cCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEE
Confidence 3458899999999984 778888888753 69999999999888887642 322 233322222111 124799999
Q ss_pred EcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
...... ..+..+.+.|+|+|+++....
T Consensus 114 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 114 IGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp ESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 876532 356788899999999998754
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-05 Score=57.67 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=74.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+...++..+.+...--.|++++|+|.| .+|..+++++...|++|++..+.... +
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~---------------------L 197 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L 197 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC---------------------H
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh---------------------H
Confidence 4677777778888888776799999999985 58999999999999999988754322 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|++|.++|.+..+.. ..+++|..++.+|..
T Consensus 198 ~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 198 SLYTRQADLIIVAAGCVNLLRS--DMVKEGVIVVDVGIN 234 (285)
T ss_dssp HHHHTTCSEEEECSSCTTCBCG--GGSCTTEEEEECCCE
T ss_pred HHHhhcCCEEEECCCCCCcCCH--HHcCCCeEEEEeccC
Confidence 2344578999999998855443 457899999999854
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-05 Score=57.04 Aligned_cols=98 Identities=31% Similarity=0.311 Sum_probs=69.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~v 110 (173)
....++++||.+|+| .|..+..+++..| .+|++++.+++..+.+++.+ +.. .++..+..... ...+.+|+|
T Consensus 73 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v 150 (215)
T 2yxe_A 73 LDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRI 150 (215)
T ss_dssp TTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEE
T ss_pred hCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEE
Confidence 345889999999998 5888888888776 79999999999888887643 322 22222111110 013479999
Q ss_pred EEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
+.+.+.....+.+.+.|+++|+++..-
T Consensus 151 ~~~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 151 YTTAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchHHHHHHHHHHcCCCcEEEEEE
Confidence 988777656678889999999987764
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=6.8e-05 Score=55.34 Aligned_cols=87 Identities=25% Similarity=0.264 Sum_probs=65.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc----
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---- 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---- 118 (173)
+++++|+|+|++|.+++..+...|.+|+++.|+.+|.+.+. +++.. .....+ +. ++|++|+|++...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~------l~-~~DiVInaTp~Gm~~~~ 188 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP------KS-AFDLIINATSASLHNEL 188 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH------hc-cCCEEEEcccCCCCCCC
Confidence 89999999999999999999999999999999999988877 48843 333322 11 7999999988541
Q ss_pred chH-HH-HHhhhcCCEEEEeCC
Q 030694 119 PLM-PL-IGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 ~~~-~~-~~~l~~~G~~v~~g~ 138 (173)
.+. .. ...++++..++.+..
T Consensus 189 ~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 189 PLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp SSCHHHHHHHHHHCSEEEESCC
T ss_pred CCChHHHHhhCCCCCEEEEeCC
Confidence 122 22 236788888888764
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2.6e-05 Score=56.44 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-E--EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-S--FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+.. . . ..|-.+.+.+++. .+++|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4788999998 9999999999999999999999998877766554431 1 1 2344444333322 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 85 ~li~~Ag~ 92 (251)
T 1zk4_A 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999985
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-05 Score=56.69 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++ ++++.+.+.+.+ +... ..|-.+.+.+.+. .++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 99999999999999999999999 766655544322 3221 1244444333322 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 86 id~li~~Ag~ 95 (261)
T 1gee_A 86 LDVMINNAGL 95 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=4e-05 Score=55.97 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .+++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999988766554333 4322 2344444333222 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 93 D~lv~~Ag~ 101 (260)
T 2zat_A 93 DILVSNAAV 101 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.7e-05 Score=58.08 Aligned_cols=75 Identities=23% Similarity=0.220 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCCE---EeeCCChHHHHHhc-------CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGADS---FLVSRDQDEMQAAM-------GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~-------~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++ ++++.+.+.++ .+... ..|-.+.+.+++.. ++
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 99999999999999999999998 66665544332 34332 23444444333322 48
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 100 ~d~vi~~Ag~ 109 (274)
T 1ja9_A 100 LDFVMSNSGM 109 (274)
T ss_dssp EEEEECCCCC
T ss_pred CCEEEECCCC
Confidence 9999999885
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-05 Score=57.19 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=66.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHH---HcCCCEE---eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVE---RLGADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++.++ .+.+.+ ..|.... .|-.+.+.+.+. .++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 999999999999999999999988654 232221 1353321 244443332222 258
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|++|++.|... ..+.+++.|+.+|+++.+++..
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 166 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 166 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechh
Confidence 999999998531 1234455566679999998644
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.12 E-value=5.2e-05 Score=55.42 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHhc--------CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM--------GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~--------~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++.. ++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999988766554433 3321 23444443333322 68
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 93 id~li~~Ag~ 102 (266)
T 1xq1_A 93 LDILINNLGA 102 (266)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 9999999985
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-05 Score=56.16 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHh---cCCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~---~~~~d~vid~~g 115 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+. ++.... ..|-.+.+.+++. .+++|++|++.|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 4789999998 99999999999999999999999987766554 243111 2344555544443 358999999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 84 ~ 84 (246)
T 2ag5_A 84 F 84 (246)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.7e-05 Score=56.77 Aligned_cols=99 Identities=17% Similarity=0.266 Sum_probs=68.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
+++++|.|+ +++|...++.+... |++|+.+++++++.+.+.+.++.... .|-.+.+.+++. .+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 578999998 89999998877666 46899999999988888776663322 244444433332 258999
Q ss_pred EEEcCCCcc--------------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH--------------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.++..|+ .+|+++.+++..+
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~ 140 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDAC 140 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCC
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchh
Confidence 999998621 1223344443 4699999987654
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=98.11 E-value=1.6e-05 Score=60.86 Aligned_cols=91 Identities=21% Similarity=0.248 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|..+++.++..|++|++.+++..+.+.+.+ .|...+ +.+.++....|+++-+++...
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~------~~l~ell~~aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-TGAKFV------EDLNEMLPKCDVIVINMPLTEKT 234 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-HCCEEC------SCHHHHGGGCSEEEECSCCCTTT
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-CCCeEc------CCHHHHHhcCCEEEECCCCCHHH
Confidence 46899999999999999999999999999999998766777766 775432 123455668999999988531
Q ss_pred --c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -...+..|+++..++.++.
T Consensus 235 ~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSC
T ss_pred HHhhcHHHHhcCCCCCEEEECcC
Confidence 1 2477788999999988874
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.6e-05 Score=58.24 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=68.6
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCCCEE--eeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v--~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ | ++|...++.+...|++|++++++++..+.+.+ ..+.... .|-.+.+.+++. .+
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 6 99999999999999999999998765444333 2443322 344444433332 25
Q ss_pred CccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++|++|++.|... ..+.++..|+++|+++.+++..+
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~ 172 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA 172 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence 8999999998531 12234445667899999876543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.6e-05 Score=56.67 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=55.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHhc-------CCccEEEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAAM-------GTMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~-------~~~d~vid 112 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++.. +++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 36889998 999999999999999999999999888877766565322 23444544443332 37999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 81 nAg~ 84 (248)
T 3asu_A 81 NAGL 84 (248)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9984
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.3e-05 Score=57.13 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=68.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHHHcCCCEE---eeCCChHHHHHhc--CCccEEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERLGADSF---LVSRDQDEMQAAM--GTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v---~~~~~~~~~~~~~--~~~d~vid 112 (173)
-+|++++|.|+ +++|++.++.+...|++|++.++++. ..+.+++ .|.... .|-.+.+..++.. +++|++++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 36899999998 89999999999999999999998754 2444454 564332 2333333332222 48999999
Q ss_pred cCCCcc-------------------------chHHHHHhhh---cCCEEEEeCCCCC
Q 030694 113 TVSAVH-------------------------PLMPLIGLLK---SQGKLVLLGAPEK 141 (173)
Q Consensus 113 ~~g~~~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~ 141 (173)
+.|... ..+.+++.|. ++|++|.+++..+
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~ 142 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS 142 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence 999641 1334556552 3589999986554
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.4e-05 Score=55.90 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=65.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.+++|+|+ |.+|..+++.+...|.+|+++++++++...... -+... ..|..+.+.+.+...++|++|.+.|....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS 82 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccC-CceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence 68999998 999999999999999999999998876532211 12221 23445556666667789999999986421
Q ss_pred --------hHHHHHhhhc--CCEEEEeCCC
Q 030694 120 --------LMPLIGLLKS--QGKLVLLGAP 139 (173)
Q Consensus 120 --------~~~~~~~l~~--~G~~v~~g~~ 139 (173)
...+++.+++ -++++.+++.
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 2344444433 2588888754
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.1e-05 Score=58.48 Aligned_cols=89 Identities=19% Similarity=0.226 Sum_probs=65.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|... ..+. .+...+.|++|.|++.+..+...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~---~~~~---~~~~~~aDvvi~~vp~~~~~~~v 74 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-LGAER---AATP---CEVVESCPVTFAMLADPAAAEEV 74 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCee---cCCH---HHHHhcCCEEEEEcCCHHHHHHH
Confidence 57999999999999999999999999999999999999888 56432 1121 12233579999999975334444
Q ss_pred H-------HhhhcCCEEEEeCCC
Q 030694 124 I-------GLLKSQGKLVLLGAP 139 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~ 139 (173)
+ ..++++..++..+..
T Consensus 75 ~~~~~~l~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 75 CFGKHGVLEGIGEGRGYVDMSTV 97 (287)
T ss_dssp HHSTTCHHHHCCTTCEEEECSCC
T ss_pred HcCcchHhhcCCCCCEEEeCCCC
Confidence 4 556777777777543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.2e-05 Score=57.41 Aligned_cols=98 Identities=15% Similarity=0.249 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ +++|...++.+...|++|+++ .+++++.+...+.+ +.. . ..|-.+.+.+++. .++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999998 899999999999999999998 55555554443322 422 1 2344444433332 258
Q ss_pred ccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCC
Q 030694 107 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 107 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+|+++++.|... ..+.++..++++|+++.+++.
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 145 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ 145 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence 999999997430 122344556667899998753
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=6.9e-05 Score=54.12 Aligned_cols=76 Identities=20% Similarity=0.377 Sum_probs=55.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C--CCEEe--eC--CChHHHHH-------h
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G--ADSFL--VS--RDQDEMQA-------A 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g--~~~v~--~~--~~~~~~~~-------~ 103 (173)
-++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ + ...++ +- .+.+.+.+ .
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 35789999998 99999999999999999999999988877665533 2 12222 22 33332222 2
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2589999999985
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.8e-05 Score=57.72 Aligned_cols=100 Identities=21% Similarity=0.352 Sum_probs=67.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-------H----HHHHHHcCCCE---EeeCCChHHHHHh--
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------K----SEAVERLGADS---FLVSRDQDEMQAA-- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-------~----~~~~~~~g~~~---v~~~~~~~~~~~~-- 103 (173)
-.+++++|.|+ +++|...++.+...|++|+++++++++ + +.+.+ .|... ..|-.+.+.+++.
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence 35889999998 999999999999999999999998774 2 22222 44322 2344554433332
Q ss_pred -----cCCccEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 104 -----MGTMDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 104 -----~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
.+++|++|++.|... ..+.++..|+. .|+++.+++..+
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~ 191 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN 191 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 258999999999521 12344455543 489999986543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.10 E-value=4.3e-05 Score=56.19 Aligned_cols=100 Identities=22% Similarity=0.267 Sum_probs=68.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-.++++||.|+ +++|...++.+...|++|++++++ +++.+.+.+. .|... ..|-.+.+.+++. .+
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 899999999999999999998764 4444443332 34332 2344444333322 24
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|++.|... ..+.+++.|+++|+++.+++..
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 8999999998631 1345667777899999998755
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.6e-05 Score=56.45 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=67.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCC-hHHHHHhcCCccEEEEcCCCcc---
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRD-QDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~-~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
+|+|+|+ |.+|..+++.+...|++|+++++++++.+.. .+.. ...|..+ .+.+.+...++|++|.+.|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 6899998 9999999999999999999999998765433 1211 1235555 6666667779999999999652
Q ss_pred ------chHHHHHhhhcC--CEEEEeCCCCC
Q 030694 119 ------PLMPLIGLLKSQ--GKLVLLGAPEK 141 (173)
Q Consensus 119 ------~~~~~~~~l~~~--G~~v~~g~~~~ 141 (173)
....+++.++.. ++++.+++...
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 123445555443 48998886543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.1e-05 Score=57.89 Aligned_cols=75 Identities=19% Similarity=0.336 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CE---EeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DS---FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 104 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+.+.+++. .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 5789999998 99999999999999999999999988776654433 32 21 1344444333322 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|++.|.
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 489999999984
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.10 E-value=8.3e-05 Score=55.05 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|..+++.+...|++|+++.+++++.+.+.+.+ +... ..|-.+.+.+++. .+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999998 99999999999999999999998887766554433 4322 2344444433332 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 123 d~li~~Ag~ 131 (285)
T 2c07_A 123 DILVNNAGI 131 (285)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.09 E-value=7.5e-06 Score=58.38 Aligned_cols=96 Identities=18% Similarity=0.221 Sum_probs=66.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
..+|+|+|+ |.+|..+++.+...|.+|+++++++++...+.. +... ..|..+.+.+.+...++|++|.+.|...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~ 81 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE--HLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN 81 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCT--TEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccC--ceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence 368999998 999999999999999999999999876543211 1111 2344556666667779999999998641
Q ss_pred ---------chHHHHHhhhcC--CEEEEeCCCC
Q 030694 119 ---------PLMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 119 ---------~~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
....+++.++.. .+++.+++..
T Consensus 82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp --CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 122445555544 4899887644
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.1e-05 Score=57.42 Aligned_cols=75 Identities=17% Similarity=0.291 Sum_probs=57.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.++++... ..|-.+.+.+++. .+++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5789999998 999999999999999999999999888877766566432 2344444433332 2489999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 91 i~~Ag~ 96 (265)
T 2o23_A 91 VNCAGI 96 (265)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999884
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=98.09 E-value=4.5e-06 Score=61.24 Aligned_cols=94 Identities=20% Similarity=0.219 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.++.+||.+|+|. |..+..+++.. |.+|++++.+++..+.+++......++..+..+ .....+.+|+|+.... +..
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~-~~~ 160 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR-LPFSDTSMDAIIRIYA-PCK 160 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTS-CSBCTTCEEEEEEESC-CCC
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhh-CCCCCCceeEEEEeCC-hhh
Confidence 5788999999986 88888888876 779999999999999998843332333322111 1111247999996544 447
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
+..+.+.|+|||+++...
T Consensus 161 l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 161 AEELARVVKPGGWVITAT 178 (269)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEE
Confidence 899999999999988775
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=2.3e-05 Score=57.34 Aligned_cols=75 Identities=16% Similarity=0.263 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
+++++||.|+ |++|+..++.+...|++|+++ .+++++.+.+.+.+ +.... .|-.+.+.+++. .++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 999999999999999999987 78877766665533 33221 244444333322 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 83 id~lv~nAg~ 92 (258)
T 3oid_A 83 LDVFVNNAAS 92 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.5e-05 Score=57.69 Aligned_cols=73 Identities=25% Similarity=0.322 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHH----h--cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQA----A--MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~----~--~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|-.+.+.+++ + .+++|++|
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 5789999998 9999999999999999999999999988888776764322 34444433322 2 13789999
Q ss_pred EcC
Q 030694 112 DTV 114 (173)
Q Consensus 112 d~~ 114 (173)
.+.
T Consensus 109 ~~a 111 (281)
T 3ppi_A 109 VAH 111 (281)
T ss_dssp ECC
T ss_pred Ecc
Confidence 883
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.9e-05 Score=55.02 Aligned_cols=74 Identities=18% Similarity=0.263 Sum_probs=53.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
+++++|.|+ |++|...++.+...|++|+++++++++ .+.+.+.+ +... ..|-.+.+.+++. .++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999998 999999999999999999999998876 55544433 3222 1344444433322 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 82 iD~lv~nAg~ 91 (258)
T 3a28_C 82 FDVLVNNAGI 91 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=7e-05 Score=55.83 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHH---HcCCCEEe---eCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVE---RLGADSFL---VSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~---~~g~~~v~---~~~~~~~~~~~-------~~ 105 (173)
.++++||.|+ |++|...++.+...|++|++++++.+ +.+.+.+ ..|....+ |-.+.+.+++. .+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999988632 3333322 24533222 33343332222 35
Q ss_pred CccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++|+++++.|... ..+.++..++++|+++.+++..+
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~ 189 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence 8999999998521 12244456677899999986543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=4.4e-05 Score=56.53 Aligned_cols=76 Identities=21% Similarity=0.285 Sum_probs=53.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC----------------cchHHHHHHHc---CCCE---EeeCCCh
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------------PSKKSEAVERL---GADS---FLVSRDQ 97 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~----------------~~~~~~~~~~~---g~~~---v~~~~~~ 97 (173)
-.+++++|.|+ +++|...++.+...|++|++++++ +++++.+.+.+ +... ..|-.+.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 35789999998 899999999999999999999886 44454444322 3222 2344444
Q ss_pred HHHHHh-------cCCccEEEEcCCC
Q 030694 98 DEMQAA-------MGTMDGIIDTVSA 116 (173)
Q Consensus 98 ~~~~~~-------~~~~d~vid~~g~ 116 (173)
+.+++. .+++|++|++.|.
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 433332 2589999999985
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.08 E-value=3e-05 Score=56.78 Aligned_cols=76 Identities=20% Similarity=0.305 Sum_probs=56.0
Q ss_pred CCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CC-E--EeeCCChHHHHHh-------c
Q 030694 41 KPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-AD-S--FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~-~--v~~~~~~~~~~~~-------~ 104 (173)
-.+++++|.|+ | ++|...++.+...|++|+++++++++.+.+.+++ + .. . ..|-.+.+.+++. .
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 35789999998 7 7999999999999999999999998877766544 2 11 1 2344444333322 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|++.|.
T Consensus 100 g~id~li~~Ag~ 111 (266)
T 3o38_A 100 GRLDVLVNNAGL 111 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 489999999995
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-05 Score=62.71 Aligned_cols=96 Identities=15% Similarity=0.183 Sum_probs=65.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.+|+|+|+|++|..++..+... |.+|++++++.++.+.+.+..+... .+|..+.+.+.+...++|++|+|++....
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~ 101 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH 101 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence 467899999999999999988887 6799999999888777665334322 23444444455555689999999996522
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
......+++++-.++...
T Consensus 102 ~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 102 PNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp HHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHhcCCEEEEee
Confidence 222334556665555543
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.3e-05 Score=57.04 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=54.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-E--EeeCCChHHHHHhc-------CCccEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-S--FLVSRDQDEMQAAM-------GTMDGI 110 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~-------~~~d~v 110 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++.. . . ..|-.+.+.+++.. +++|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999998 8999999999999999999999998888777665532 1 1 23444544443332 378999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 102 vnnAG~ 107 (272)
T 2nwq_A 102 INNAGL 107 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.2e-05 Score=57.93 Aligned_cols=97 Identities=20% Similarity=0.176 Sum_probs=64.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+++++|.|+ |.+|..+++.+...|+ +|+++++++++.+.... -+... ..|..+.+.+.+...++|++|++.|...
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 678999998 9999999999999999 99999998775443221 12211 1233334444455568999999999642
Q ss_pred --------------chHHHHHhhhcC--CEEEEeCCCC
Q 030694 119 --------------PLMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 119 --------------~~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
....+++.+++. ++++.+++..
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~ 134 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG 134 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence 112334444433 6899887654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.07 E-value=7.1e-05 Score=55.42 Aligned_cols=75 Identities=11% Similarity=0.221 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHc----CCCEE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERL----GADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|...++.+...|++|+++++ ++++.+.+.+.+ +.... .|-.+.+.+++. .+
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 4789999998 99999999999999999999998 555555544433 32222 233444333322 35
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 104 ~iD~lv~nAg~ 114 (281)
T 3v2h_A 104 GADILVNNAGV 114 (281)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999996
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.5e-05 Score=59.34 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=67.4
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHHHHhcCC
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~ 106 (173)
.++.....-..+++++|+|+|++|.+++..+...|+ +|+++.|+.+|.+.+.+.++. ..+.... .+.+.+...+
T Consensus 116 ~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~-~~~l~~~l~~ 194 (283)
T 3jyo_A 116 RGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD-ARGIEDVIAA 194 (283)
T ss_dssp HHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC-STTHHHHHHH
T ss_pred HHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC-HHHHHHHHhc
Confidence 334444333568999999999999999999999999 799999999988776554431 1121111 1122233447
Q ss_pred ccEEEEcCCCccc----hHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAVHP----LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g 137 (173)
+|++|+|++.... ..-....++++..++.+-
T Consensus 195 ~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 195 ADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp SSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred CCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 8999999974310 011234566776666664
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.07 E-value=2e-05 Score=58.00 Aligned_cols=100 Identities=14% Similarity=0.225 Sum_probs=66.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
..+++++|.|+ |++|...++.+...|++|++.. +++++.+.+.+. .+... ..|-.+.+.+++. .+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999998 9999999999999999999884 455555544432 34322 2344444433332 25
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|++.|... ..+.+++.++++|+++.+++..
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~ 164 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ 164 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence 8999999998631 1335556677789999998643
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.07 E-value=6e-05 Score=54.79 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .+++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999987765544322 4321 2344444433332 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 92 d~vi~~Ag~ 100 (260)
T 3awd_A 92 DILVACAGI 100 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=98.06 E-value=3.3e-05 Score=56.93 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=71.8
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+.+.. -.|++++|+|.| .+|..+++++...|++|++..+....++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------- 188 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------- 188 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH--------------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH--------------------
Confidence 46777777778888777 689999999985 6899999999999999999876432222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.....|++|.++|.+..+.. ..+++|..++.+|...
T Consensus 189 -~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 189 -SMTRSSKIVVVAVGRPGFLNR--EMVTPGSVVIDVGINY 225 (276)
T ss_dssp -HHHHHSSEEEECSSCTTCBCG--GGCCTTCEEEECCCEE
T ss_pred -HhhccCCEEEECCCCCccccH--hhccCCcEEEEeccCc
Confidence 223357899999998855544 3479999999998643
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.06 E-value=4.5e-05 Score=56.49 Aligned_cols=75 Identities=28% Similarity=0.327 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE----EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS----FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|-.+.+.+++. .++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999999999999999998877665442 24321 1344444333222 258
Q ss_pred ccEEEEc-CCC
Q 030694 107 MDGIIDT-VSA 116 (173)
Q Consensus 107 ~d~vid~-~g~ 116 (173)
+|++|++ .|.
T Consensus 107 iD~li~naag~ 117 (286)
T 1xu9_A 107 LDMLILNHITN 117 (286)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 9999998 453
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.7e-05 Score=58.58 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=68.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
+|||+|+ |.+|..+++.+... |.+|+++++++++...+.. .+... ..|..+.+.+.+...++|++|.+.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 5899998 99999999988877 8999999999887654433 33322 3466667777777789999999998642
Q ss_pred ----chHHHHHhhhcC--CEEEEeCCCC
Q 030694 119 ----PLMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 119 ----~~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
....+++.++.. ++++.+++..
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 123455555544 4788887644
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.2e-05 Score=58.91 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ .|... . .+.++....|+++.+++...
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~---~l~ell~~aDvV~l~~P~t~~t 233 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSAS-FGVQQ----L---PLEEIWPLCDFITVHTPLLPST 233 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHH-TTCEE----C---CHHHHGGGCSEEEECCCCCTTT
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee----C---CHHHHHhcCCEEEEecCCCHHH
Confidence 46889999999999999999999999999999988765 34555 77642 1 13345668999999998652
Q ss_pred --ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|++++.++.++..
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg 257 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARG 257 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCT
T ss_pred HHhhCHHHHhhCCCCcEEEECCCc
Confidence 22 3678889999999999863
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.06 E-value=5.6e-05 Score=55.03 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCCEE---eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGADSF---LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~~v---~~~~~~~~~~~~-------~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|++++++++ .+...+ ..+.... .|-.+.+.+++. .+++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999998 99999999999999999999998876 222222 1243222 244444433332 24899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 82 ~lv~~Ag~ 89 (255)
T 2q2v_A 82 ILVNNAGI 89 (255)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.06 E-value=3.7e-05 Score=56.72 Aligned_cols=77 Identities=22% Similarity=0.310 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-------------CcchHHHHHHH---cCCCE---EeeCCChHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAVER---LGADS---FLVSRDQDEM 100 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-------------~~~~~~~~~~~---~g~~~---v~~~~~~~~~ 100 (173)
-.+++++|.|+ +++|...++.+...|++|+++++ +.++.+...+. .+... ..|-.+.+.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 35789999998 99999999999999999999988 44444444332 23322 2344444433
Q ss_pred HHh-------cCCccEEEEcCCCc
Q 030694 101 QAA-------MGTMDGIIDTVSAV 117 (173)
Q Consensus 101 ~~~-------~~~~d~vid~~g~~ 117 (173)
++. .+++|++|++.|..
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 332 25899999999863
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00011 Score=53.01 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .+++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 99999999999999999999999988777665533 4322 2344444333322 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|++.|..
T Consensus 84 d~li~~Ag~~ 93 (247)
T 3lyl_A 84 DILVNNAGIT 93 (247)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999863
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.04 E-value=6e-05 Score=55.54 Aligned_cols=100 Identities=21% Similarity=0.297 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-------HHHHHHH---cCCCE---EeeCCChHHHHHh----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAVER---LGADS---FLVSRDQDEMQAA---- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-------~~~~~~~---~g~~~---v~~~~~~~~~~~~---- 103 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++ ++...+. .+... ..|-.+.+.+++.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 5789999998 999999999999999999999998764 2322221 34322 2344444433322
Q ss_pred ---cCCccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 104 ---MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 104 ---~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
.+++|++|++.|... ..+.++..|+ ++|+++.+++..+
T Consensus 85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~ 152 (274)
T 3e03_A 85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS 152 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence 258999999999530 1233445553 4589999986554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.7e-05 Score=56.12 Aligned_cols=100 Identities=20% Similarity=0.322 Sum_probs=66.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------cchHHHHHHH---cCCCEE---eeCCChHHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAVER---LGADSF---LVSRDQDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~------------~~~~~~~~~~---~g~~~v---~~~~~~~~~~ 101 (173)
-.++++||.|+ |++|...++.+...|++|++++++ .++.+...+. .+.... .|-.+.+.++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 35789999998 999999999999999999999987 4444433321 343322 3444444333
Q ss_pred Hh-------cCCccEEEEcCCCcc---------------------chHHHHHhhhc---CCEEEEeCCCC
Q 030694 102 AA-------MGTMDGIIDTVSAVH---------------------PLMPLIGLLKS---QGKLVLLGAPE 140 (173)
Q Consensus 102 ~~-------~~~~d~vid~~g~~~---------------------~~~~~~~~l~~---~G~~v~~g~~~ 140 (173)
+. .+++|++|++.|... ..+.++..|.+ +|+++.+++..
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 160 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA 160 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence 32 258999999998641 12234444532 68999998654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.04 E-value=5.4e-05 Score=54.51 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=52.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCC-E---EeeCCChHHHHHh-------cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD-S---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~---v~~~~~~~~~~~~-------~~~ 106 (173)
+++++|.|+ |++|..+++.+...|++|+++ ++++++.+.+.+.+ +.. . ..|-.+.+.+++. .++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 368999998 999999999999999999998 78877766554322 422 1 2244444433332 358
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 81 ~d~li~~Ag~ 90 (245)
T 2ph3_A 81 LDTLVNNAGI 90 (245)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.8e-05 Score=57.72 Aligned_cols=76 Identities=22% Similarity=0.372 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EE--eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SF--LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~ 109 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.. .. .|-.+.+.+++. .+++|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999998 99999999999999999999999988877776656532 12 344444333322 248999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|++.|.
T Consensus 85 lv~nAg~ 91 (257)
T 3tpc_A 85 LVNCAGT 91 (257)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.2e-05 Score=57.13 Aligned_cols=94 Identities=20% Similarity=0.222 Sum_probs=64.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHH----Hh---cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ----AA---MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~---~~~~d~vid~ 113 (173)
-+++++|.|+ |++|...++.+...|++|+++++++++... ....++-.+.+.++ ++ .+++|++|++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3689999998 999999999999999999999998875431 11223333433222 22 2479999999
Q ss_pred CCCc-------c-------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 114 VSAV-------H-------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 114 ~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.|.. . ....++..++++|+++.+++..+
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA 148 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence 9841 0 12344556667899999986543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.04 E-value=3.8e-05 Score=56.98 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHH----cCCCE---EeeCCC----hHHHHHh-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVER----LGADS---FLVSRD----QDEMQAA----- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~----~g~~~---v~~~~~----~~~~~~~----- 103 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++ ++.+.+.+. .+... ..|-.+ .+.+++.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 4788999998 9999999999999999999999988 666555432 24221 234444 4333222
Q ss_pred --cCCccEEEEcCCC
Q 030694 104 --MGTMDGIIDTVSA 116 (173)
Q Consensus 104 --~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 102 RAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 2489999999984
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.2e-05 Score=56.93 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=68.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHHHHh------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQAA------ 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~---~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~------ 103 (173)
.+++++|.|+ |++|...++.+...|+ +|+++++++++.+.+.+.+ +... ..|-.+.+.+++.
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999998 9999999988877777 9999999998877766543 3221 2344444433332
Q ss_pred -cCCccEEEEcCCCcc--------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 104 -MGTMDGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 104 -~~~~d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
.+++|++|++.|... ..+.++..| +..|+++.+++..+
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~ 178 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG 178 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh
Confidence 247999999998421 122344444 35689999986544
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.1e-05 Score=56.04 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=54.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-e--CCcchHHHHHHHc-CCCEEeeCCCh-HHHHHh---cCCccEEEEc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-S--TSPSKKSEAVERL-GADSFLVSRDQ-DEMQAA---MGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~--~~~~~~~~~~~~~-g~~~v~~~~~~-~~~~~~---~~~~d~vid~ 113 (173)
+++++|.|+ |++|...++.+...|++|+++ + +++++.+.+.+++ +. .+.+..+. ...+++ .+++|++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g~iD~lv~~ 79 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGEAIDTIVSN 79 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 468999998 999999999999999999999 6 8888887776655 32 23344432 333333 3489999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 80 Ag~ 82 (244)
T 1zmo_A 80 DYI 82 (244)
T ss_dssp CCC
T ss_pred CCc
Confidence 984
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-05 Score=58.11 Aligned_cols=92 Identities=14% Similarity=0.226 Sum_probs=68.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
...+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... . ...+.....|++|.|++.+..+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~---~~~e~~~~aDvVi~~vp~~~~~~ 102 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-LGATIH---E---QARAAARDADIVVSMLENGAVVQ 102 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TTCEEE---S---SHHHHHTTCSEEEECCSSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-CCCEee---C---CHHHHHhcCCEEEEECCCHHHHH
Confidence 3568999999999999999999999999999999999888877 564322 1 12234457899999999764444
Q ss_pred HHH------HhhhcCCEEEEeCCCC
Q 030694 122 PLI------GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 122 ~~~------~~l~~~G~~v~~g~~~ 140 (173)
..+ ..++++..++.++...
T Consensus 103 ~v~~~~~~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 103 DVLFAQGVAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHTTTCHHHHCCTTCEEEECSCCC
T ss_pred HHHcchhHHhhCCCCCEEEecCCCC
Confidence 443 3567777777776543
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=98.03 E-value=1.6e-05 Score=61.18 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~-- 117 (173)
-.|++|.|+|.|.+|..+++.++..|++ |++.+++..+.+.+.+ +|...+ .+ +.++....|+++.+++..
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK-VGARRV---EN---IEELVAQADIVTVNAPLHAG 234 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH-TTEEEC---SS---HHHHHHTCSEEEECCCCSTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh-cCcEec---CC---HHHHHhcCCEEEECCCCChH
Confidence 4689999999999999999999999997 9999988776666666 774321 11 233445789999999874
Q ss_pred --cch-HHHHHhhhcCCEEEEeCC
Q 030694 118 --HPL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 --~~~-~~~~~~l~~~G~~v~~g~ 138 (173)
..+ ...+..|++++.++.++.
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCC
Confidence 223 356788999999988875
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.03 E-value=4.7e-05 Score=54.30 Aligned_cols=98 Identities=23% Similarity=0.212 Sum_probs=70.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC------CeEEEEeCCcchHHHHHHHc---C-------CCEEeeCCChHHHH-
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG------VKVTVISTSPSKKSEAVERL---G-------ADSFLVSRDQDEMQ- 101 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g------~~v~~~~~~~~~~~~~~~~~---g-------~~~v~~~~~~~~~~- 101 (173)
.++++++||.+|+|. |..+..+++..+ .+|++++.+++..+.+++.+ + .-.++..+..+...
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence 457899999999975 778888888776 59999999999888877642 2 11232222122110
Q ss_pred --HhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 102 --AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 102 --~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
...+.+|+|+........+..+.+.|+++|+++..-
T Consensus 156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 123579999988777767788999999999988764
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.03 E-value=2.6e-05 Score=58.82 Aligned_cols=89 Identities=24% Similarity=0.349 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++.|+|.|.+|...++.++..|++|++.+++.++. .+.+ .|... . + ..++....|+++.+++...
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~g~~~-~---~---l~ell~~aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEK-INAKA-V---S---LEELLKNSDVISLHVTVSKDA 210 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHH-TTCEE-C---C---HHHHHHHCSEEEECCCCCTTS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHh-cCcee-c---C---HHHHHhhCCEEEEeccCChHH
Confidence 468899999999999999999999999999999988764 3445 77542 1 2 2233447899999998542
Q ss_pred --ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|++++.++.++.
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSC
T ss_pred HHhhCHHHHhcCCCCCEEEECCC
Confidence 23 467788999999998875
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.03 E-value=7.1e-05 Score=55.52 Aligned_cols=75 Identities=27% Similarity=0.327 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-------HHH----HHHHcCCCE---EeeCCChHHHHHh---
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSE----AVERLGADS---FLVSRDQDEMQAA--- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-------~~~----~~~~~g~~~---v~~~~~~~~~~~~--- 103 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++ ++. +.+ .+... ..|-.+.+.+++.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 5789999998 999999999999999999999998763 222 222 34322 2244444433322
Q ss_pred ----cCCccEEEEcCCCc
Q 030694 104 ----MGTMDGIIDTVSAV 117 (173)
Q Consensus 104 ----~~~~d~vid~~g~~ 117 (173)
.+++|++|++.|..
T Consensus 87 ~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHSCCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 24899999999853
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.03 E-value=3.7e-05 Score=57.85 Aligned_cols=91 Identities=23% Similarity=0.229 Sum_probs=66.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
...+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+. .+.....|++|-|++.+..+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~~~---~~~~~~aDvvi~~vp~~~~~~ 92 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-HGASVC---ESP---AEVIKKCKYTIAMLSDPCAAL 92 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEEC---SSH---HHHHHHCSEEEECCSSHHHHH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-CCCeEc---CCH---HHHHHhCCEEEEEcCCHHHHH
Confidence 4568999999999999999999999999999999999999887 675321 111 122335799999998764444
Q ss_pred HHH-------HhhhcCCEEEEeCCC
Q 030694 122 PLI-------GLLKSQGKLVLLGAP 139 (173)
Q Consensus 122 ~~~-------~~l~~~G~~v~~g~~ 139 (173)
..+ ..++++..++.++..
T Consensus 93 ~v~~~~~~l~~~l~~g~~vv~~st~ 117 (310)
T 3doj_A 93 SVVFDKGGVLEQICEGKGYIDMSTV 117 (310)
T ss_dssp HHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred HHHhCchhhhhccCCCCEEEECCCC
Confidence 444 345666777777643
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.2e-05 Score=58.47 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC----cch----HHHHHHHcCCCEEeeCCC
Q 030694 26 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS----PSK----KSEAVERLGADSFLVSRD 96 (173)
Q Consensus 26 ~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~----~~~----~~~~~~~~g~~~v~~~~~ 96 (173)
....-+.++.....--+..+|+|+|+|..|..+++++...|+ +|++++++ .+| +...++.+....- ....
T Consensus 175 ~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~~ 253 (388)
T 1vl6_A 175 VSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PERL 253 (388)
T ss_dssp HHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTCC
T ss_pred HHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccCc
Confidence 333335555555533467899999999999999999999999 89999998 655 3344443332110 0112
Q ss_pred hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
...+.+...+.|++|.+.+..-.....++.|+++..++.++.+..
T Consensus 254 ~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 254 SGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp CSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred hhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 233445566799999999843334577788998887777776654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=9.5e-05 Score=53.68 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=64.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCcc--hHHHHHHHc-CCC-E--EeeCCCh-HHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPS--KKSEAVERL-GAD-S--FLVSRDQ-DEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~-v~~~~~~~~--~~~~~~~~~-g~~-~--v~~~~~~-~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|..+++.+...|++ |++++++++ ..+.+.+.. +.. . ..|-.+. +.+++. .+
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4789999998 99999999999999996 999998763 344454422 211 1 1244433 322222 24
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhhc-----CCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 140 (173)
++|++|++.|... ..+.+++.+.+ +|+++.+++..
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~ 140 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchh
Confidence 8999999998531 12234444432 58899988644
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.7e-05 Score=58.92 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=59.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHhc---CCccEEEEc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAAM---GTMDGIIDT 113 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~---~~~d~vid~ 113 (173)
-.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+++.. +++|++|++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 46889999998 999999999999999999999999998888776565322 23444554444433 478999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 94 Ag~ 96 (291)
T 3rd5_A 94 AGI 96 (291)
T ss_dssp CCC
T ss_pred CcC
Confidence 985
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.02 E-value=5e-05 Score=55.32 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----------CCEE--eeCCChHHHHHh----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----------ADSF--LVSRDQDEMQAA---- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----------~~~v--~~~~~~~~~~~~---- 103 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+. .-.. .|-.+.+.+++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 4789999998 999999999999999999999999887776654332 1112 243444333222
Q ss_pred ---cCCc-cEEEEcCCC
Q 030694 104 ---MGTM-DGIIDTVSA 116 (173)
Q Consensus 104 ---~~~~-d~vid~~g~ 116 (173)
.+++ |++|.+.|.
T Consensus 86 ~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHSSCCSEEEECCCC
T ss_pred HHHhCCCCeEEEECCCc
Confidence 2356 999999985
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=6.8e-05 Score=56.58 Aligned_cols=92 Identities=20% Similarity=0.142 Sum_probs=68.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHH-hcCCccEEEEcCCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQA-AMGTMDGIIDTVSAVH 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~-~~~~~d~vid~~g~~~ 118 (173)
..+|.|+|.|.+|...++.++..|. +|+++++++++.+.+.+ .|.. .... + ..+ ...+.|+||-|++...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-~G~~~~~~~-~----~~~~~~~~aDvVilavp~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTT-S----IAKVEDFSPDFVMLSSPVRT 106 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEES-C----TTGGGGGCCSEEEECSCGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-CCCcchhcC-C----HHHHhhccCCEEEEeCCHHH
Confidence 3689999999999999999999998 99999999999988887 7752 2221 1 112 3457999999999763
Q ss_pred ---chHHHHHhhhcCCEEEEeCCCC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+..+...++++..++.+++..
T Consensus 107 ~~~vl~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 107 FREIAKKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred HHHHHHHHhhccCCCcEEEECCCCc
Confidence 2234445567777887777543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3.5e-05 Score=56.45 Aligned_cols=75 Identities=13% Similarity=0.233 Sum_probs=51.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++ +..+.+.+..+.... .|-.+.+.+++. .++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999985 6999999999999999999999987 333344333343222 344454433332 237
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.01 E-value=4.7e-05 Score=56.38 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
..+++++|.|+ |++|...++.+...|++|+++++ ++++.+.+.++ .|... ..|-.+.+.+++. .+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45789999998 99999999999999999999985 65555544432 24322 2244443332222 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 107 ~iD~lvnnAg~ 117 (280)
T 4da9_A 107 RIDCLVNNAGI 117 (280)
T ss_dssp CCCEEEEECC-
T ss_pred CCCEEEECCCc
Confidence 89999999986
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3.9e-05 Score=56.52 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=52.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCE--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++++ ..+.+.+..+... ..|-.+.+.+++. .++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999985 69999999999999999999999875 3444444344222 2344454433322 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999984
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=5.4e-05 Score=55.69 Aligned_cols=77 Identities=22% Similarity=0.263 Sum_probs=53.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|..+++.+...|++|+++++ ++++.+.+.+. .+... ..|-.+.+.+++. .+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 99999999999999999999988 55555444332 34322 2344444333322 24
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
++|++|++.|..
T Consensus 106 ~id~lv~nAg~~ 117 (269)
T 4dmm_A 106 RLDVLVNNAGIT 117 (269)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 899999999864
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.5e-05 Score=57.33 Aligned_cols=97 Identities=29% Similarity=0.315 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEEEc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
.++++++||.+|+| .|..+..+++..+.+|++++.+++..+.+++.+ |.. .++..+..... ....++|+|+.+
T Consensus 88 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 88 NLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF-PPKAPYDVIIVT 165 (235)
T ss_dssp TCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEEC
T ss_pred CCCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCC-CCCCCccEEEEC
Confidence 34889999999998 688888888877689999999998888877743 321 12221111100 012259999988
Q ss_pred CCCccchHHHHHhhhcCCEEEEeC
Q 030694 114 VSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.......+.+.+.|++||+++..-
T Consensus 166 ~~~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 166 AGAPKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CcHHHHHHHHHHhcCCCcEEEEEE
Confidence 776666678899999999987654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.01 E-value=3.9e-05 Score=60.73 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=61.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
+++|+|+|+|.+|..+++.+...|++|++++++.++.+.+.+.++... ..|..+.+.+.+...++|++++|++.....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence 578999999999999999888899999999999877766554344211 224444455555566899999999864222
Q ss_pred HHHHHhhhcCCEEEE
Q 030694 121 MPLIGLLKSQGKLVL 135 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~ 135 (173)
.....+++++..++.
T Consensus 83 ~i~~a~l~~g~~vvd 97 (450)
T 1ff9_A 83 TVIKSAIRQKKHVVT 97 (450)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHhCCCeEEE
Confidence 223344444444443
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00011 Score=54.17 Aligned_cols=76 Identities=16% Similarity=0.279 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------cchHHHHHH---HcCCCEE---eeCCChHHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAVE---RLGADSF---LVSRDQDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~~v---~~~~~~~~~~ 101 (173)
-.+++++|.|+ |++|...++.+...|++|++++++ .++.+...+ ..+.... .|-.+.+.++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 35789999998 999999999999999999999987 333333222 1343322 2444443333
Q ss_pred Hh-------cCCccEEEEcCCC
Q 030694 102 AA-------MGTMDGIIDTVSA 116 (173)
Q Consensus 102 ~~-------~~~~d~vid~~g~ 116 (173)
+. .+++|++|++.|.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 22 2589999999985
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=2.9e-05 Score=57.08 Aligned_cols=75 Identities=16% Similarity=0.358 Sum_probs=53.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHcCCC---EEeeCCChHHHHHh-------cC--
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGAD---SFLVSRDQDEMQAA-------MG-- 105 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~-- 105 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++ .+.+.+.++.. ...|-.+.+.+++. .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999984 799999999999999999999998765 35555445422 12344454433322 24
Q ss_pred -CccEEEEcCCC
Q 030694 106 -TMDGIIDTVSA 116 (173)
Q Consensus 106 -~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 86 ~~iD~lv~nAg~ 97 (269)
T 2h7i_A 86 NKLDGVVHSIGF 97 (269)
T ss_dssp CCEEEEEECCCC
T ss_pred CCceEEEECCcc
Confidence 79999999984
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.01 E-value=2.4e-05 Score=57.35 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=66.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHc---CCCE---EeeCCChHHHHHh-------
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERL---GADS---FLVSRDQDEMQAA------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~---g~~~---v~~~~~~~~~~~~------- 103 (173)
-.+++++|.|+ +++|...++.+...|++|++++++.. +.+.+.+++ |... ..|-.+.+.+++.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35789999998 89999999999999999999876543 344443323 3221 2344444433332
Q ss_pred cCCccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 104 MGTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 104 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++|++|++.|... ..+.++..|+++|+++.+++..
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~ 150 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSL 150 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechh
Confidence 258999999999530 1223445556789999987643
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.4e-05 Score=57.17 Aligned_cols=91 Identities=20% Similarity=0.301 Sum_probs=67.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
..+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|...... +. .+.....|++|.|++.+..+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~~~-~~----~e~~~~aDvvi~~vp~~~~~~~ 80 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-EGACGAAA-SA----REFAGVVDALVILVVNAAQVRQ 80 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEES-SS----TTTTTTCSEEEECCSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-cCCccccC-CH----HHHHhcCCEEEEECCCHHHHHH
Confidence 357999999999999999999999999999999999998888 67654121 11 1233478999999998644454
Q ss_pred HH-------HhhhcCCEEEEeCCC
Q 030694 123 LI-------GLLKSQGKLVLLGAP 139 (173)
Q Consensus 123 ~~-------~~l~~~G~~v~~g~~ 139 (173)
.+ ..++++..++..+..
T Consensus 81 v~~~~~~l~~~l~~g~ivv~~st~ 104 (303)
T 3g0o_A 81 VLFGEDGVAHLMKPGSAVMVSSTI 104 (303)
T ss_dssp HHC--CCCGGGSCTTCEEEECSCC
T ss_pred HHhChhhHHhhCCCCCEEEecCCC
Confidence 43 456677777776643
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00017 Score=48.43 Aligned_cols=94 Identities=23% Similarity=0.114 Sum_probs=63.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHHc--CCCEE-eeCCChHHHHHh-cCCccEEEEcCCCc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERL--GADSF-LVSRDQDEMQAA-MGTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~~--g~~~v-~~~~~~~~~~~~-~~~~d~vid~~g~~ 117 (173)
..+++|+|+|.+|...++.+...|.+|++++++ +++.+.+.+.+ |...+ -|..+.+.+.+. ..+.|.++-+++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 567999999999999999999999999999997 45555555433 33322 133445555544 56899999999987
Q ss_pred cchH----HHHHhhhcCCEEEEeC
Q 030694 118 HPLM----PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ~~~~----~~~~~l~~~G~~v~~g 137 (173)
. .+ ...+.+.+..+++..-
T Consensus 83 ~-~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 83 A-DNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp H-HHHHHHHHHHHHTSSSCEEEEC
T ss_pred H-HHHHHHHHHHHHCCCCEEEEEE
Confidence 3 23 2233444555665543
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=7.6e-05 Score=55.65 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=71.3
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhcCC
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~ 106 (173)
.+.....++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++.. |.. .++..+-.+ +.+.
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~ 137 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE----FDEP 137 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG----CCCC
T ss_pred HHHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH----cCCC
Confidence 344444558999999999984 78888888887899999999999888887743 321 222222112 2568
Q ss_pred ccEEEEcCCCc---------------cchHHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAV---------------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+|+....-. ..+..+.+.|+|||+++....
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 99998653321 246688899999999987764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.7e-05 Score=54.03 Aligned_cols=91 Identities=22% Similarity=0.325 Sum_probs=63.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCc-----
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV----- 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~----- 117 (173)
+|+|+|+ |.+|..+++.+...|.+|+++++++++...+.. -+...+ .|..+.+. +..+++|++|.+.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 6899998 999999999999999999999999877665533 233222 12222222 4556899999999873
Q ss_pred -----cchHHHHHhhh-cCCEEEEeCC
Q 030694 118 -----HPLMPLIGLLK-SQGKLVLLGA 138 (173)
Q Consensus 118 -----~~~~~~~~~l~-~~G~~v~~g~ 138 (173)
.....+++.++ .+++++.+++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 11234555554 3478888864
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4.3e-05 Score=56.46 Aligned_cols=97 Identities=24% Similarity=0.371 Sum_probs=73.1
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcCCCEEeeCCCh
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLGADSFLVSRDQ 97 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 97 (173)
.-+||+...++..+.+...--+|++++|+|+|. +|..+++++... |++|++..+...
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~-------------------- 195 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTR-------------------- 195 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCS--------------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchh--------------------
Confidence 356777777777788876557899999999974 699999999999 899998754432
Q ss_pred HHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 98 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 98 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+.....|++|.++|.+..+.. ..+++|..++.+|...
T Consensus 196 -~L~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 196 -DLPALTRQADIVVAAVGVAHLLTA--DMVRPGAAVIDVGVSR 235 (281)
T ss_dssp -CHHHHHTTCSEEEECSCCTTCBCG--GGSCTTCEEEECCEEE
T ss_pred -HHHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEccCCC
Confidence 223344578999999998854433 3378999999998643
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=4.6e-05 Score=56.45 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=73.3
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+.......+.++..--+|++++|+|+| .+|.-+++++...|++|++..+....+..
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~------------------ 198 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH------------------ 198 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH------------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH------------------
Confidence 35677777777778887766789999999997 57999999999999999998755433322
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.....|++|.++|.+..+... .+++|..++.+|..
T Consensus 199 ---~~~~ADIVI~Avg~p~lI~~~--~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 199 ---HVENADLLIVAVGKPGFIPGD--WIKEGAIVIDVGIN 233 (288)
T ss_dssp ---HHHHCSEEEECSCCTTCBCTT--TSCTTCEEEECCCE
T ss_pred ---HhccCCEEEECCCCcCcCCHH--HcCCCcEEEEccCC
Confidence 223578999999988544333 36899999999864
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.3e-05 Score=56.79 Aligned_cols=101 Identities=17% Similarity=0.032 Sum_probs=68.3
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCc
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
.++.....-..+++++|+|+|++|..++..+...|+ +|+++.|+.++.+.+.+.++. ....... ++..++
T Consensus 115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~a 188 (281)
T 3o8q_A 115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSY 188 (281)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCE
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCC
Confidence 334444333478999999999999999999999997 999999999988777665653 1222221 122589
Q ss_pred cEEEEcCCCccchH---HHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDTVSAVHPLM---PLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~ 138 (173)
|++|+|++....-+ --...++++..++.+..
T Consensus 189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp EEEEECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence 99999998652110 01235666666677653
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.7e-05 Score=54.64 Aligned_cols=75 Identities=13% Similarity=0.217 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCEE---eeCCChHHHHHhc-------CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADSF---LVSRDQDEMQAAM-------GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v---~~~~~~~~~~~~~-------~~ 106 (173)
++++++|.|+ |++|...++.+...|++|++++++.++.+.+.++ .+.... .|-.+.+.+++.. ++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 3678999998 9999999999999999999999998877665443 343322 3445555444443 48
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 81 id~li~~Ag~ 90 (235)
T 3l77_A 81 VDVVVANAGL 90 (235)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999986
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=97.98 E-value=3.5e-05 Score=59.86 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
-.|+++.|+|.|.+|..+++.++..|++|++.+++..+.+...+ +|.... . .++++....|+++.+++..
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~-~G~~~~---~---~l~ell~~aDvV~l~~Plt~~t 261 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTWH---A---TREDMYPVCDVVTLNCPLHPET 261 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEEC---S---SHHHHGGGCSEEEECSCCCTTT
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhh-cCceec---C---CHHHHHhcCCEEEEecCCchHH
Confidence 36889999999999999999999999999999998766666665 775421 1 1334566899999998853
Q ss_pred -cch-HHHHHhhhcCCEEEEeCC
Q 030694 118 -HPL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 -~~~-~~~~~~l~~~G~~v~~g~ 138 (173)
..+ ...+..|+++..++.++.
T Consensus 262 ~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHHhhHHHHhhCCCCCEEEECCC
Confidence 223 467788999988888874
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=9.2e-05 Score=55.57 Aligned_cols=100 Identities=15% Similarity=0.182 Sum_probs=69.8
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCc
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
+.....++++++||.+|+|. |..+..+++..|++|++++.+++..+.+++.. |. ..++.. +.. ++.+.+
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~---~~~~~f 156 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE---DFAEPV 156 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG---GCCCCC
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-ChH---HCCCCc
Confidence 34444558899999999975 77778888877899999999999888887743 21 122222 111 123689
Q ss_pred cEEEEc-----CCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|+|+.. ++.+ ..+..+.+.|+|||+++....
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999876 4322 245677899999999887653
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-05 Score=57.73 Aligned_cols=76 Identities=28% Similarity=0.439 Sum_probs=54.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------chHHHHHHHcC---CC-EE--eeC-C
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAVERLG---AD-SF--LVS-R 95 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~-------------------~~~~~~~~~~g---~~-~v--~~~-~ 95 (173)
+.+|+|+|+|++|..+++.+...|. ++++++++. .|.+.+.+.+. .. .+ ++. -
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 5789999999999999999999998 899999887 66666654332 22 22 111 1
Q ss_pred ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
..+...+...++|++|+|+.+..
T Consensus 111 ~~~~~~~~~~~~DvVi~~~d~~~ 133 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDCTDNVA 133 (249)
T ss_dssp CHHHHHHHHHTSSEEEECCSSHH
T ss_pred CHhHHHHHHhCCCEEEEeCCCHH
Confidence 22334445568999999998874
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00022 Score=53.01 Aligned_cols=75 Identities=20% Similarity=0.282 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .++
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 99999999999999999999999988766554433 4322 1344444333222 347
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 105 id~li~~Ag~ 114 (302)
T 1w6u_A 105 PNIVINNAAG 114 (302)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999984
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=2.6e-05 Score=55.65 Aligned_cols=96 Identities=25% Similarity=0.233 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---C-------CCEEeeCCChHHHHHhcCCc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---G-------ADSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g-------~~~v~~~~~~~~~~~~~~~~ 107 (173)
++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++.+ + .-.++..+... .....+.+
T Consensus 75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM-GYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG-CCGGGCCE
T ss_pred CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc-CcccCCCc
Confidence 57899999999874 777777887765 59999999999888876632 1 11222221111 00113479
Q ss_pred cEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+........+..+.+.|+|||+++..-
T Consensus 153 D~i~~~~~~~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 153 DAIHVGAAAPVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 999987776667789999999999988753
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=58.17 Aligned_cols=95 Identities=24% Similarity=0.284 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHHHHHh-cCCccEEEEcC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAA-MGTMDGIIDTV 114 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~-~~~~d~vid~~ 114 (173)
++++++||-+|+|. |..+..+++ .|++|++++.++...+.++++. +.. .++.. +....+ .+.+|+++.+.
T Consensus 118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~---d~~~~~~~~~fD~Vv~n~ 192 (254)
T 2nxc_A 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAALPFGPFDLLVANL 192 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHHGGGCCEEEEEEEC
T ss_pred cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEEC---ChhhcCcCCCCCEEEECC
Confidence 37889999999875 666666665 5779999999999888887742 322 22222 222223 35899999764
Q ss_pred CCc---cchHHHHHhhhcCCEEEEeCCC
Q 030694 115 SAV---HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~---~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
... ..+..+.+.|+|+|+++..+..
T Consensus 193 ~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 193 YAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 322 2456778899999999987643
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0001 Score=54.31 Aligned_cols=77 Identities=17% Similarity=0.184 Sum_probs=52.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCCE---EeeCCChHHHHHh------cCCcc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGADS---FLVSRDQDEMQAA------MGTMD 108 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~------~~~~d 108 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++...+.+.+ ..+... ..|-.+.+.+.+. .+++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 35889999998 999999999999999999999966443333322 123221 2344444333322 24899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
++|++.|..
T Consensus 109 ~lv~nAg~~ 117 (273)
T 3uf0_A 109 VLVNNAGII 117 (273)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999863
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.2e-05 Score=57.29 Aligned_cols=75 Identities=24% Similarity=0.311 Sum_probs=57.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.++.... .|-.+.+.+++. .+++|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999998 9999999999999999999999999988888776664322 244444332222 3589999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
+++.|.
T Consensus 84 vnnAg~ 89 (281)
T 3zv4_A 84 IPNAGI 89 (281)
T ss_dssp ECCCCC
T ss_pred EECCCc
Confidence 999985
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.2e-05 Score=56.39 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHh--cCCccEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA--MGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~--~~~~d~vi 111 (173)
.++++||.+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |. -.++..+..+..... .+.+|+|+
T Consensus 53 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred cCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 568899999998 677888888877 579999999999888887743 42 123332223333334 45899998
Q ss_pred EcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
...+.. ..+..+.+.|++||+++...
T Consensus 132 ~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 132 IDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 766542 34567788999999998863
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=5.1e-05 Score=56.46 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=37.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHH
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVE 84 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~ 84 (173)
.+++++|.|+ |++|...++.+...|++|++++ +++++.+.+.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~ 52 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA 52 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 4788999998 9999999999999999999999 98877665544
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=4.1e-05 Score=56.23 Aligned_cols=98 Identities=20% Similarity=0.247 Sum_probs=69.1
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
.++.+...-..+ +++|+|+|.+|...++.+...|++|++++++.++.+.+.+.+|.. . .+ ..+. .+.|+++
T Consensus 106 ~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~~---~~~~-~~~Divi 176 (263)
T 2d5c_A 106 EALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--VP---LEKA-REARLLV 176 (263)
T ss_dssp HHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--CC---GGGG-GGCSEEE
T ss_pred HHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--hh---Hhhc-cCCCEEE
Confidence 334443332456 999999999999999999999999999999988877776657753 2 12 1233 5799999
Q ss_pred EcCCCccch---HH-HHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVHPL---MP-LIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~~~---~~-~~~~l~~~G~~v~~g~ 138 (173)
.|++..... .. ....++++..++.++.
T Consensus 177 ~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 177 NATRVGLEDPSASPLPAELFPEEGAAVDLVY 207 (263)
T ss_dssp ECSSTTTTCTTCCSSCGGGSCSSSEEEESCC
T ss_pred EccCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 999976210 00 1456778888887764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.97 E-value=8.8e-05 Score=53.47 Aligned_cols=75 Identities=17% Similarity=0.280 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++ .+++++.+.+.+. .+... ..|-.+.+.+++. .++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4688999998 999999999999999999999 5666665554432 24322 2244444433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 84 ~d~vi~~Ag~ 93 (247)
T 2hq1_A 84 IDILVNNAGI 93 (247)
T ss_dssp CCEEEECC--
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=5.8e-05 Score=55.20 Aligned_cols=75 Identities=20% Similarity=0.333 Sum_probs=52.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++++ ..+.+.+..+.... .|-.+.+.+++. .++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999986 69999999999989999999999875 34444443443222 344444433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 87 iD~lv~~Ag~ 96 (261)
T 2wyu_A 87 LDYLVHAIAF 96 (261)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.96 E-value=5e-05 Score=56.42 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=67.8
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
..++.....-..+++++|+|+|++|.+++..++..|+ +|+++.|+.+|.+.+.+.++ .+.. +.+.+ . .+|+
T Consensus 110 ~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~-l-~~Di 181 (282)
T 3fbt_A 110 GKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSN-L-KGDV 181 (282)
T ss_dssp HHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTT-C-CCSE
T ss_pred HHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHh-c-cCCE
Confidence 3444444433568999999999999999999999999 99999999888766654332 2221 22223 3 7999
Q ss_pred EEEcCCCcc--c---hHHHHHhhhcCCEEEEeCC
Q 030694 110 IIDTVSAVH--P---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 110 vid~~g~~~--~---~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+|++... . ..-....++++..++.+-.
T Consensus 182 vInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY 215 (282)
T 3fbt_A 182 IINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIY 215 (282)
T ss_dssp EEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCC
T ss_pred EEECCccCccCCCccCCCCHHHcCCCCEEEEEee
Confidence 999996531 0 1113455778877777753
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=9.1e-05 Score=53.91 Aligned_cols=74 Identities=14% Similarity=0.049 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC-EEeeCCCh-HHHHHh---cCCccEEEEcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD-SFLVSRDQ-DEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~-~v~~~~~~-~~~~~~---~~~~d~vid~~g 115 (173)
++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+ ..+.+ ..++..+. ...+++ .+++|++|++.|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg 81 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI 81 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 47899998 999999999999999999999998887665543 12432 22244332 222222 358999999998
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 82 ~~ 83 (254)
T 1zmt_A 82 FA 83 (254)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.96 E-value=7.7e-05 Score=53.74 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=53.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC-------eEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-----
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV-------KVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA----- 103 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~-------~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~----- 103 (173)
+++++|.|+ |++|...++.+...|+ +|+++++++++.+.+.+.+ +... ..|-.+.+.+++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 578999998 9999999999888999 9999999988777665543 3221 1344444333322
Q ss_pred --cCCccEEEEcCCC
Q 030694 104 --MGTMDGIIDTVSA 116 (173)
Q Consensus 104 --~~~~d~vid~~g~ 116 (173)
.+++|++|.+.|.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 2489999999985
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.5e-05 Score=55.85 Aligned_cols=97 Identities=20% Similarity=0.223 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-------CeEEEEeCCcchHHHHHHHc----------CCCEEeeCCChHHHH
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPSKKSEAVERL----------GADSFLVSRDQDEMQ 101 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-------~~v~~~~~~~~~~~~~~~~~----------g~~~v~~~~~~~~~~ 101 (173)
.++++++||.+|+|. |..+..+++..+ .+|++++.+++..+.+++.+ ..-.++..+..+...
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP 159 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC
Confidence 357899999999874 777777777665 49999999998887776632 111222222111110
Q ss_pred HhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 102 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 102 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
..+.+|+|+...........+.+.|++||+++..-
T Consensus 160 -~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp -GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred -cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence 12479999988887766788999999999987653
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.95 E-value=8e-05 Score=55.61 Aligned_cols=76 Identities=26% Similarity=0.360 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------cchHHHHHHH---cCCCE---EeeCCChHHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAVER---LGADS---FLVSRDQDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~------------~~~~~~~~~~---~g~~~---v~~~~~~~~~~ 101 (173)
-.+++++|.|+ +++|...++.+...|++|++++++ +++++...+. .|... ..|-.+.+.++
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 35789999998 899999999999999999999887 4444443322 34332 23444444333
Q ss_pred Hh-------cCCccEEEEcCCC
Q 030694 102 AA-------MGTMDGIIDTVSA 116 (173)
Q Consensus 102 ~~-------~~~~d~vid~~g~ 116 (173)
+. .+++|++|++.|.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhCCCCEEEECCCC
Confidence 32 2589999999985
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.95 E-value=4.9e-05 Score=55.17 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=56.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++. .+++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999988877765543 3221 2344444333322 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 88 d~li~~Ag~ 96 (253)
T 3qiv_A 88 DYLVNNAAI 96 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999986
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=97.95 E-value=5.7e-05 Score=55.60 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+. .+... ..|-.+.+.+++. .++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 35789999998 9999999999988999999999988766555432 24321 2344444433332 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 112 id~li~~Ag~ 121 (279)
T 3ctm_A 112 IDVFVANAGV 121 (279)
T ss_dssp CSEEEECGGG
T ss_pred CCEEEECCcc
Confidence 9999999873
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.94 E-value=9.3e-05 Score=53.74 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=50.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eC-CChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VS-RDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~-~~~~~~~~~~~~~d~vid~~g~ 116 (173)
..+++++|.|+ |++|..+++.+...|++|++++++++. +.+ ++....+ |- .+.+.+-+...++|++|++.|.
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~-~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKR-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHH-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHh-hCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 56889999998 999999999999999999999998733 333 4522222 22 1112111222389999999985
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0001 Score=53.06 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=51.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+++++|.|+ |++|..+++.+...|++|+++ .+++++.+.+.+. .+... ..|-.+.+.+++. .+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999998 999999999999999999985 7877766554432 24321 1344444433332 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 81 d~li~~Ag~ 89 (244)
T 1edo_A 81 DVVVNNAGI 89 (244)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00011 Score=55.51 Aligned_cols=75 Identities=24% Similarity=0.299 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---------CcchHHHHHHH---cCCCEEeeCCChHHH----HHh-
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAVER---LGADSFLVSRDQDEM----QAA- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~---------~~~~~~~~~~~---~g~~~v~~~~~~~~~----~~~- 103 (173)
.+++++|.|+ |++|..+++.+...|++|++.++ +.++.+.+.++ .+...+.|..+.+.. +++
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 5789999998 99999999999999999999754 45555444332 344445566654322 222
Q ss_pred --cCCccEEEEcCCC
Q 030694 104 --MGTMDGIIDTVSA 116 (173)
Q Consensus 104 --~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 88 ~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 88 DTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHTSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 3589999999984
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.2e-05 Score=59.26 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=66.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++. +.+.+.+ .|...+ +.+.++....|+++-+++...
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~-~g~~~~------~~l~ell~~aDiV~l~~Plt~~t~ 230 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SKERARA-DGFAVA------ESKDALFEQSDVLSVHLRLNDETR 230 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHH-TTCEEC------SSHHHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHh-cCceEe------CCHHHHHhhCCEEEEeccCcHHHH
Confidence 58899999999999999999999999999999875 3344445 675422 122334457899999987542
Q ss_pred -c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 -P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. ....+..|+++..++.++.
T Consensus 231 ~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 231 SIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred HhhCHHHHhhCCCCcEEEECCC
Confidence 1 2367788999999999984
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=8.8e-05 Score=53.71 Aligned_cols=76 Identities=26% Similarity=0.345 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHH---cCCCEE---eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|++++++ +++.+.+.+. .+.... .|-.+.+.+++. .++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 999999999999999999998874 4555444332 343322 244444333322 248
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|+++++.|..
T Consensus 83 id~lv~nAg~~ 93 (246)
T 3osu_A 83 LDVLVNNAGIT 93 (246)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999853
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0002 Score=52.44 Aligned_cols=69 Identities=20% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++ . -... ...|-.+.+.+++. .+++|++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999998 999999999999999999999998765 1 1121 12344444433322 248999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 81 ~Ag~ 84 (264)
T 2dtx_A 81 NAGI 84 (264)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=4.7e-05 Score=54.83 Aligned_cols=73 Identities=23% Similarity=0.154 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+++++|+|+ |.+|..+++.+... |++|+++++++++.+.+ . -+... ..|..+.+.+.+...++|++|.+.|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-G-GEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-T-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-C-CCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 4688999998 99999999999888 78999999987665433 1 12222 23555666676777789999999884
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.92 E-value=9.8e-05 Score=52.83 Aligned_cols=97 Identities=22% Similarity=0.255 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC----EEeeCCChHHHHHh-cCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD----SFLVSRDQDEMQAA-MGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~----~v~~~~~~~~~~~~-~~~~d~v 110 (173)
+++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+.+... .+.||+|
T Consensus 55 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 55 NGSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp TTCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 456699999987 577788888876 579999999999888887743 322 22222222333333 3589999
Q ss_pred EEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|-..... ..+..+++.|+|||.++.-..
T Consensus 134 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 134 FGQVSPMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EEcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 8654433 246688899999999987543
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.92 E-value=2.1e-05 Score=56.28 Aligned_cols=95 Identities=17% Similarity=0.193 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-cCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~~~ 119 (173)
+++.+||-+|+| .|..+..+++. |++|++++.+++.++.+++......++..+..+..... .+.+|+|+........
T Consensus 47 ~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~ 124 (226)
T 3m33_A 47 TPQTRVLEAGCG-HGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSV 124 (226)
T ss_dssp CTTCEEEEESCT-TSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGG
T ss_pred CCCCeEEEeCCC-CCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHH
Confidence 678999999986 36666666665 88999999999999988885333333332221111111 3479999988666667
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
+..+.+.|+|||+++..+
T Consensus 125 l~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 125 ILRLPELAAPDAHFLYVG 142 (226)
T ss_dssp GGGHHHHEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEeC
Confidence 889999999999999554
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=97.92 E-value=4.2e-05 Score=57.90 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~- 118 (173)
-.|+++.|+|.|.+|...++.++..|++|++.++ +.++ ..+.+ +|... . .+ ..++....|+++.+++...
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~-~g~~~-~--~~---l~ell~~aDvVil~~p~~~~ 215 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEAS-YQATF-H--DS---LDSLLSVSQFFSLNAPSTPE 215 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHH-HTCEE-C--SS---HHHHHHHCSEEEECCCCCTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhh-cCcEE-c--CC---HHHHHhhCCEEEEeccCchH
Confidence 4688999999999999999999999999999999 7765 34444 67632 1 11 2234447899999988542
Q ss_pred ---ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 ---PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 ---~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|++++.++.++.
T Consensus 216 t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 216 TRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHhhcCHHHHhhCCCCcEEEECCC
Confidence 23 356788999999988875
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=9.7e-05 Score=54.30 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=64.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHH-------hcCCccEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQA-------AMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~-------~~~~~d~v 110 (173)
-+|+++||.|+ +++|++.++.+...|++|+++++++++. .... ...|-.+.+..++ ..+++|++
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 36899999998 8999999999999999999999976531 2211 1234444433222 23589999
Q ss_pred EEcCCCcc---------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 111 IDTVSAVH---------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~---------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~ 142 (261)
T 4h15_A 83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR 142 (261)
T ss_dssp EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence 99988420 1335556663 4689999986544
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.92 E-value=3.2e-05 Score=56.97 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=67.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
+|+|+|+ |.+|..+++.+... |++|+++++++++...+.. .+... ..|..+.+.+.+...++|++|.+.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 5899998 99999999988888 8999999998887766654 44432 2355566667777779999999988521
Q ss_pred -----chHHHHHhhhcC--CEEEEeCCC
Q 030694 119 -----PLMPLIGLLKSQ--GKLVLLGAP 139 (173)
Q Consensus 119 -----~~~~~~~~l~~~--G~~v~~g~~ 139 (173)
....+++.++.. ++++.+++.
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 122444444443 478887753
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.92 E-value=7.1e-05 Score=55.09 Aligned_cols=99 Identities=24% Similarity=0.291 Sum_probs=70.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc----C--CC--EEeeCCChHHHHHhcCCc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL----G--AD--SFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~----g--~~--~v~~~~~~~~~~~~~~~~ 107 (173)
..++++++||.+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ | .. .++..+..+. ....+.+
T Consensus 95 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~ 172 (280)
T 1i9g_A 95 GDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSV 172 (280)
T ss_dssp TTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCE
T ss_pred cCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCce
Confidence 345889999999998 677888888865 469999999999888887743 4 21 2222211111 0012379
Q ss_pred cEEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|+|+.....+ ..+..+.+.|+++|+++.+..
T Consensus 173 D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 173 DRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred eEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9999877765 567888999999999988753
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00011 Score=54.19 Aligned_cols=76 Identities=11% Similarity=0.194 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCCc--chHHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~--~G~~a~~~~~~~g~~v~~~~~~~--~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
-.+++++|.|+ |. +|+..++.+...|++|+++++++ ++.+.+.+..+.... .|-.+.+.+++. .++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 45789999995 54 99999999999999999999987 555556554453222 344444333222 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 104 id~li~nAg~ 113 (280)
T 3nrc_A 104 LDAIVHSIAF 113 (280)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999985
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00017 Score=53.40 Aligned_cols=75 Identities=15% Similarity=0.252 Sum_probs=52.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCE--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++++ ..+.+.+..+... ..|-.+.+.+++. .++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999986 59999999999999999999999875 3334433334222 2344444433322 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 100 iD~lv~~Ag~ 109 (285)
T 2p91_A 100 LDIIVHSIAY 109 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.4e-05 Score=57.83 Aligned_cols=102 Identities=19% Similarity=0.134 Sum_probs=68.5
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-EEeeCCChHHHHHhc-CCc
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-SFLVSRDQDEMQAAM-GTM 107 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~~-~~~ 107 (173)
.++.....-.++++++|+|+|++|..++..+...|++|+++.|+.+|.+.+.+.++. . ...+. .++. +.+
T Consensus 108 ~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~ 181 (272)
T 1p77_A 108 TDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTY 181 (272)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCC
T ss_pred HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCC
Confidence 344443332468899999999999999999999999999999999888777665543 1 12221 1222 489
Q ss_pred cEEEEcCCCccchH---HHHHhhhcCCEEEEeCCC
Q 030694 108 DGIIDTVSAVHPLM---PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 108 d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~~ 139 (173)
|++|+|++....-. -....++++..++.+...
T Consensus 182 DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 216 (272)
T 1p77_A 182 DLVINATSAGLSGGTASVDAEILKLGSAFYDMQYA 216 (272)
T ss_dssp SEEEECCCC-------CCCHHHHHHCSCEEESCCC
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCC
Confidence 99999999763210 012346677778887653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.91 E-value=7.6e-05 Score=54.49 Aligned_cols=76 Identities=12% Similarity=0.112 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCC---CeEEEEeCCcchHHHHHHH--cCCC-EE--eeCCChHHHHHhc-------
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAVER--LGAD-SF--LVSRDQDEMQAAM------- 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g---~~v~~~~~~~~~~~~~~~~--~g~~-~v--~~~~~~~~~~~~~------- 104 (173)
.++++++|.|+ |++|..+++.+...| ++|+++++++++.+.+.+. .+.. .. .|-.+.+.+++..
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 45789999998 999999999999999 9999999988765544431 1322 11 2334433333222
Q ss_pred C--CccEEEEcCCC
Q 030694 105 G--TMDGIIDTVSA 116 (173)
Q Consensus 105 ~--~~d~vid~~g~ 116 (173)
+ ++|++|.+.|.
T Consensus 99 g~~~id~li~~Ag~ 112 (267)
T 1sny_A 99 KDQGLNVLFNNAGI 112 (267)
T ss_dssp GGGCCSEEEECCCC
T ss_pred CCCCccEEEECCCc
Confidence 2 69999999984
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00022 Score=51.12 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+++|||+|+|.+|...++.+...|++|+++++... .++.+.+ .+.-..+...-. .....++|+||-+++.+.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~-~~~i~~i~~~~~---~~dL~~adLVIaAT~d~~- 103 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA-KGQLRVKRKKVG---EEDLLNVFFIVVATNDQA- 103 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH-TTSCEEECSCCC---GGGSSSCSEEEECCCCTH-
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH-cCCcEEEECCCC---HhHhCCCCEEEECCCCHH-
Confidence 4689999999999999999999999999999987654 3444444 343233322111 122458999999999985
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccccC
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
.+..+...++.|..+..-..+...++-...+..+
T Consensus 104 ~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~r 137 (223)
T 3dfz_A 104 VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSR 137 (223)
T ss_dssp HHHHHHHHSCTTCEEEC-----CCSEECCEEEEE
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEe
Confidence 5655555555777776654333334444444433
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=7.4e-05 Score=56.90 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=60.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCCcchHHHHHHHcCC---C-EEeeCCChHHHHHhcCCccEEEEc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAVERLGA---D-SFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~-g~-~v~~~~~~~~~~~~~~~~~g~---~-~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
-.+++|||.|+ |.+|..+++.+... |. +|+++++++.+...+.+.+.. . ...|-.+.+.+.+...++|++|.+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 35789999998 99999999988888 98 999999998887766654532 1 123555666677777799999999
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
.+..
T Consensus 99 Aa~~ 102 (344)
T 2gn4_A 99 AALK 102 (344)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9864
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=7.4e-05 Score=56.88 Aligned_cols=89 Identities=20% Similarity=0.334 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.+.++.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ +|... .+ ..+.....|+++.+++...
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~---l~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERE-LNAEF----KP---LEDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-HCCEE----CC---HHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhh-cCccc----CC---HHHHHhhCCEEEECCCCChHH
Confidence 35789999999999999999999999999999998877 55555 66531 12 2233447899999998753
Q ss_pred --ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..++.++.
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHhhCHHHHhcCCCCcEEEECCC
Confidence 23 356788999999888873
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.91 E-value=6.8e-05 Score=56.81 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=37.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHH
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVE 84 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~ 84 (173)
.++++||.|+ |++|..+++.+...|++|++++ +++++.+.+.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~ 89 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA 89 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 4688999998 9999999999999999999999 98887766554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.90 E-value=5.5e-05 Score=55.66 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=51.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++||.|+ |++|...++.+...|++|+++++++++... ... ...|-.+.+.+++. .+++|++|
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 86 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57899999998 999999999999999999999998765421 111 12344554433332 25899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 87 ~nAg~ 91 (269)
T 3vtz_A 87 NNAGI 91 (269)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99986
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.6e-05 Score=56.79 Aligned_cols=85 Identities=21% Similarity=0.176 Sum_probs=61.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~ 117 (173)
.+++++|.|+ +++|...++.+...|++|++++++++ .|-.+.+.+++. .+++|+++++.|..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4788999998 99999999999999999999988754 233443333332 25899999999853
Q ss_pred c--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 118 H--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 118 ~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
. ..+.+++.++++|+++.+++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 0 1223445566789999998654
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.90 E-value=7.8e-05 Score=53.24 Aligned_cols=97 Identities=18% Similarity=0.058 Sum_probs=68.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
...+++++||.+|+|. |..+..+++. +.+|++++.+++..+.+++.+.. -.++..+..+.. ...+.+|+|+...
T Consensus 66 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 142 (231)
T 1vbf_A 66 LDLHKGQKVLEIGTGI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWA 142 (231)
T ss_dssp TTCCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESS
T ss_pred cCCCCCCEEEEEcCCC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECC
Confidence 3458899999999974 7777777775 48999999999999888885432 123322211111 1135799999877
Q ss_pred CCccchHHHHHhhhcCCEEEEeC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.-....+.+.+.|+|||+++..-
T Consensus 143 ~~~~~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 143 TAPTLLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp BBSSCCHHHHHTEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHcCCCcEEEEEE
Confidence 66655678889999999988774
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.90 E-value=7.9e-05 Score=56.15 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------cchHHHHHHH---cCCCEE---eeCCChHHHH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAVER---LGADSF---LVSRDQDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~------------~~~~~~~~~~---~g~~~v---~~~~~~~~~~ 101 (173)
-.+++++|.|+ |++|..+++.+...|++|++++++ .++++...+. .|.... .|-.+.+.++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 35789999998 999999999999999999999876 3343333221 343322 3444444333
Q ss_pred Hh-------cCCccEEEEcCCCc
Q 030694 102 AA-------MGTMDGIIDTVSAV 117 (173)
Q Consensus 102 ~~-------~~~~d~vid~~g~~ 117 (173)
+. .+++|++|++.|..
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 32 25899999999853
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.3e-05 Score=59.47 Aligned_cols=102 Identities=14% Similarity=0.041 Sum_probs=65.9
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++.....-..+++++|+|+|++|.+++..+...|+ +|+++.|+.+|.+.+.+.+ ... ..+...+...++|++
T Consensus 106 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~---~~~---~~~~~~~~~~~aDiV 179 (277)
T 3don_A 106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI---NKI---NLSHAESHLDEFDII 179 (277)
T ss_dssp HHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC---EEE---CHHHHHHTGGGCSEE
T ss_pred HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc---ccc---cHhhHHHHhcCCCEE
Confidence 344444433468899999999999999999999999 8999999988765543311 111 123334445579999
Q ss_pred EEcCCCcc--chH--HHHHhhhcCCEEEEeCCC
Q 030694 111 IDTVSAVH--PLM--PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 111 id~~g~~~--~~~--~~~~~l~~~G~~v~~g~~ 139 (173)
|+|++... ... -....++++..++.+...
T Consensus 180 InaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~ 212 (277)
T 3don_A 180 INTTPAGMNGNTDSVISLNRLASHTLVSDIVYN 212 (277)
T ss_dssp EECCC-------CCSSCCTTCCSSCEEEESCCS
T ss_pred EECccCCCCCCCcCCCCHHHcCCCCEEEEecCC
Confidence 99987541 000 013456777777777543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=97.90 E-value=3.6e-05 Score=55.89 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-------cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~~~d~vid~ 113 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+. + ...|-.+.+.+++. .+++|++|++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999998 99999999999999999999999876554321 1 23455554433322 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 89 Ag~ 91 (247)
T 1uzm_A 89 AGL 91 (247)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=5.7e-05 Score=52.07 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--CEEeeCCChHHHHH-hcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--DSFLVSRDQDEMQA-AMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~~v~~~~~~~~~~~-~~~~~d~vid 112 (173)
.++++++||-+|+| .|..+..+++. +.+|++++.+++..+.+++.. |. -.++. .+...+.. ..+.+|+++.
T Consensus 19 ~~~~~~~vLDiGcG-~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 19 VLDDESIVVDATMG-NGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp TCCTTCEEEESCCT-TSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEE
T ss_pred hCCCCCEEEEEcCC-CCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEE
Confidence 34789999999987 37777777776 889999999999888877643 32 23333 22222211 2347999986
Q ss_pred cCCCc---------------cchHHHHHhhhcCCEEEEeCC
Q 030694 113 TVSAV---------------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 113 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+.+-- ..+..+.+.|+|||+++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 64321 124677899999999887653
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.5e-05 Score=55.73 Aligned_cols=97 Identities=14% Similarity=0.217 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCC----CEEe-eCCChHHHHHhcCCccEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGA----DSFL-VSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~----~~v~-~~~~~~~~~~~~~~~d~vi 111 (173)
.+++|++||=+|+| .|..+..+++..|. +|++++.+++.++.+++.... ..+. +...+.......+.+|++|
T Consensus 74 ~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 74 PVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEE
Confidence 35999999999997 47778888888765 899999999988888774431 1121 1222222222345799998
Q ss_pred EcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
..+..+. .+..+.+.|+|||+++..
T Consensus 153 ~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 153 ADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 7666552 355677889999998865
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00014 Score=53.65 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=65.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcC-CccEEEEcCCCccc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMG-TMDGIIDTVSAVHP 119 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~-~~d~vid~~g~~~~ 119 (173)
.+|.|+|+|.+|...++.++..|. +|+++++++++.+.+++ .|.. ... .+. .+... +.|++|.|++....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~g~~~~~~--~~~---~~~~~~~aDvVilavp~~~~ 75 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGT--TSI---AKVEDFSPDFVMLSSPVRTF 75 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEE--SCG---GGGGGTCCSEEEECSCHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-CCCccccc--CCH---HHHhcCCCCEEEEcCCHHHH
Confidence 478999999999999999998998 89999999998888877 7753 121 111 12345 79999999997632
Q ss_pred ---hHHHHHhhhcCCEEEEeCCCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+......++++..++.++...
T Consensus 76 ~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 76 REIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHHHHHHSCTTCEEEECCSCC
T ss_pred HHHHHHHHhhCCCCcEEEECCCCc
Confidence 223334566777777766443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=5.1e-05 Score=55.80 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=65.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
+|+|.|+ |.+|..+++.+... |++|+++++++++.+.+.. .+... ..|..+.+.+.+...++|++|.+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence 4899998 99999999988887 8999999999887766655 44432 235556666777777999999998852
Q ss_pred --cchHHHHHhhhc-C-CEEEEeCCC
Q 030694 118 --HPLMPLIGLLKS-Q-GKLVLLGAP 139 (173)
Q Consensus 118 --~~~~~~~~~l~~-~-G~~v~~g~~ 139 (173)
.....+++.++. + ++++.+++.
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 123344554543 3 578887653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.89 E-value=7.9e-05 Score=58.17 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=68.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC---CeEEEEeCCcchHHHHHHHcCC-----CE--EeeCCChHHHHHhcC--CccEEE
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAVERLGA-----DS--FLVSRDQDEMQAAMG--TMDGII 111 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g---~~v~~~~~~~~~~~~~~~~~g~-----~~--v~~~~~~~~~~~~~~--~~d~vi 111 (173)
.+|+|+|+|.+|..+++.+...| .+|++.+++.++.+.+.+.++. -. .+|-.+.+.+.+... ++|++|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 47999999999999999888887 4899999999988877665531 11 234445555555544 499999
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+|.......+-.+++.+-.++.+..
T Consensus 82 n~ag~~~~~~v~~a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQDLTIMEACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred ECCCcccChHHHHHHHHhCCCEEEecC
Confidence 999865434445566777777776543
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=5.3e-05 Score=56.43 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=64.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+ .|.. . ..+.+ +...++|++|.|++.+..+...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~-~--~~~~~---~~~~~~D~vi~~v~~~~~~~~~ 78 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAE-T--ASTAK---AIAEQCDVIITMLPNSPHVKEV 78 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-E--CSSHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-CCCe-e--cCCHH---HHHhCCCEEEEECCCHHHHHHH
Confidence 37999999999999999888899999999999998888877 5642 1 22221 2223689999999976444544
Q ss_pred H-------HhhhcCCEEEEeCC
Q 030694 124 I-------GLLKSQGKLVLLGA 138 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~ 138 (173)
+ ..++++..++.++.
T Consensus 79 ~~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 79 ALGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHSTTCHHHHCCTTCEEEECSC
T ss_pred HhCcchHhhcCCCCCEEEECCC
Confidence 4 45677777777754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00018 Score=54.53 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH----HHHHHHc-----CCCE--EeeCCChHHHHHhcCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK----SEAVERL-----GADS--FLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~----~~~~~~~-----g~~~--v~~~~~~~~~~~~~~~~d~ 109 (173)
.+.+|||+|+ |.+|..+++.+...|.+|++++++..+. ..+...+ +.-. ..|..+.+.+.+...++|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4689999998 9999999999999999999999865432 2222211 2112 2345556667777779999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.+.
T Consensus 104 Vih~A~~ 110 (351)
T 3ruf_A 104 VLHQAAL 110 (351)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999986
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.88 E-value=6.7e-05 Score=55.40 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--CE-E--eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DS-F--LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~-v--~~~~~~~~~~~~-------~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++.. .. . .|-.+.+.+++. .+++|
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999998 9999999999999999999999998877766554431 11 1 233443333222 25899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 108 ~lvnnAg~ 115 (276)
T 2b4q_A 108 ILVNNAGT 115 (276)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=97.88 E-value=6.4e-05 Score=57.56 Aligned_cols=92 Identities=18% Similarity=0.316 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~- 118 (173)
-.|+++.|+|.|.+|...++.++ ..|++|++.+++.++.+.+.+ +|...+ .+ ..++....|+++.+++...
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-LGAERV---DS---LEELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HTCEEC---SS---HHHHHHHCSEEEECCCCSGG
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-cCcEEe---CC---HHHHhccCCEEEEeCCCChH
Confidence 46889999999999999999999 999999999998877666655 675422 12 2233446899999998642
Q ss_pred ---ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 ---PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 ---~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 234 t~~li~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCC
Confidence 22 3567788888888877643
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.88 E-value=6.7e-05 Score=54.21 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=54.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .+++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 578999998 99999999999999999999999988777665544 2221 2344444433332 2489
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 82 d~li~~Ag~ 90 (250)
T 2cfc_A 82 DVLVNNAGI 90 (250)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.88 E-value=3.8e-05 Score=57.02 Aligned_cols=89 Identities=19% Similarity=0.191 Sum_probs=64.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+. .+...+.|++|.|++.+..+...
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~~---~~~~~~advvi~~v~~~~~~~~v 74 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-LGARQA---SSP---AEVCAACDITIAMLADPAAAREV 74 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-HTCEEC---SCH---HHHHHHCSEEEECCSSHHHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CCH---HHHHHcCCEEEEEcCCHHHHHHH
Confidence 36889999999999998888889999999999999998888 664321 121 12233579999999986444444
Q ss_pred H-------HhhhcCCEEEEeCCC
Q 030694 124 I-------GLLKSQGKLVLLGAP 139 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~ 139 (173)
+ ..++++..++.++..
T Consensus 75 ~~~~~~l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 75 CFGANGVLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp HHSTTCGGGTCCTTCEEEECSCC
T ss_pred HcCchhhhhcccCCCEEEECCCC
Confidence 4 345566677766643
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=6.3e-05 Score=54.68 Aligned_cols=101 Identities=17% Similarity=0.091 Sum_probs=69.3
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCccEEEE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
....++++.+||-+|+| .|..+..+++..+++|++++.+++..+.+++.... -.++..+..+. ....+.+|+|+.
T Consensus 49 ~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~ 126 (266)
T 3ujc_A 49 SDIELNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-EFPENNFDLIYS 126 (266)
T ss_dssp TTCCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-CCCTTCEEEEEE
T ss_pred HhcCCCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-CCCCCcEEEEeH
Confidence 33345789999999997 67777788887788999999999999999884322 12222211111 111347999997
Q ss_pred cCCCcc--------chHHHHHhhhcCCEEEEeCC
Q 030694 113 TVSAVH--------PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 113 ~~g~~~--------~~~~~~~~l~~~G~~v~~g~ 138 (173)
...-.. .+..+.+.|+|||+++....
T Consensus 127 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 127 RDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 644332 35678899999999988753
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.2e-05 Score=55.57 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=71.1
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhc-CC
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAM-GT 106 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~-~~ 106 (173)
....++++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+ ... +.
T Consensus 87 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~ 162 (255)
T 3mb5_A 87 AYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---GIEEEN 162 (255)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---CCCCCS
T ss_pred HhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---ccCCCC
Confidence 334458899999999975 77888888874 569999999999888887743 422 222221111 122 36
Q ss_pred ccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+++...+.+ ..+..+.+.|+|+|+++.+..
T Consensus 163 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 163 VDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp EEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99999887766 367899999999999988753
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=97.87 E-value=7.6e-05 Score=54.87 Aligned_cols=76 Identities=18% Similarity=0.252 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHH---cCCCE-E--eeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~ 105 (173)
-.+++++|.|+ |++|..+++.+...|++|++++++. ++.+.+.+. .+... + .|-.+.+.+.+. .+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999999999999999954 433433332 34322 2 233443332222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 107 ~id~li~nAg~ 117 (271)
T 4iin_A 107 GLSYLVNNAGV 117 (271)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 89999999986
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.87 E-value=7.4e-05 Score=55.25 Aligned_cols=77 Identities=23% Similarity=0.303 Sum_probs=55.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
..++++||.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+.+++. .++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999988877665544 3222 2344444433222 258
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|++.|..
T Consensus 102 id~lv~nAg~~ 112 (279)
T 3sju_A 102 IGILVNSAGRN 112 (279)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCCC
Confidence 99999999863
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=9.1e-05 Score=53.39 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCE-E--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADS-F--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... . .|-.+.+.+++. .++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4788999998 9999999999999999999999998876655443 24322 1 244444433332 248
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 86 ~d~vi~~Ag~ 95 (248)
T 2pnf_A 86 IDILVNNAGI 95 (248)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.87 E-value=9.3e-05 Score=53.65 Aligned_cols=98 Identities=20% Similarity=0.196 Sum_probs=70.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc----CCC--EEeeCCChHHHHHhc-CCcc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL----GAD--SFLVSRDQDEMQAAM-GTMD 108 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~----g~~--~v~~~~~~~~~~~~~-~~~d 108 (173)
..++++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+. .+. +.+|
T Consensus 92 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D 168 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYD 168 (258)
T ss_dssp TTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEE
T ss_pred cCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcC
Confidence 3458899999999984 88888888875 569999999999888887743 522 2222221111 012 3699
Q ss_pred EEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 109 GIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 109 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+++...+.+ ..+..+.+.|+++|+++.+..
T Consensus 169 ~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 169 GVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 999877765 567888999999999988764
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.9e-05 Score=59.01 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=68.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~---- 117 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++..+.+...+ +|.... + +.++....|+++-+++..
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~---l~ell~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-LGLRQV----A---CSELFASSDFILLALPLNADTL 215 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-HTEEEC----C---HHHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-cCceeC----C---HHHHHhhCCEEEEcCCCCHHHH
Confidence 5889999999999999999999999999999998755565655 674321 1 233444689999998843
Q ss_pred cch-HHHHHhhhcCCEEEEeCCC
Q 030694 118 HPL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 118 ~~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
..+ ...+..|+++..++.++..
T Consensus 216 ~li~~~~l~~mk~gailIN~arg 238 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCRG 238 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSCG
T ss_pred HHhCHHHHhhCCCCcEEEECCCC
Confidence 122 3677889999999988743
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0002 Score=56.09 Aligned_cols=95 Identities=17% Similarity=0.317 Sum_probs=71.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHh-cCCccEEEEcCCCccc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-MGTMDGIIDTVSAVHP 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-~~~~d~vid~~g~~~~ 119 (173)
.+.+|+|+|.|.+|..+++.++..|..|++++.++++.+.+++ .|...+ -|..+.+.+... ..+.|+++-+++....
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~ 81 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 81 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence 4567999999999999999999999999999999999999988 785433 255556666655 3589999999998742
Q ss_pred hH---HHHHhhhcCCEEEEeC
Q 030694 120 LM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~---~~~~~l~~~G~~v~~g 137 (173)
.. ...+.+.|..+++.-.
T Consensus 82 n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp HHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEE
Confidence 22 3334455665665543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00011 Score=53.35 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+...|++|++++++++. .+ .+... ..|-.+.+.+++. .+++|++|+
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQ-YPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SC-CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hc-CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999998 999999999999999999999998653 11 34221 2344454433332 248999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 81 ~Ag~ 84 (250)
T 2fwm_X 81 AAGI 84 (250)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9985
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00012 Score=56.01 Aligned_cols=93 Identities=20% Similarity=0.265 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCC-------------C------hHHHH
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSR-------------D------QDEMQ 101 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~-------------~------~~~~~ 101 (173)
.+|++|.|.|.|.+|+.+++.++..|++|++.+.++++.+..++ +|++.+ +.. . .+..+
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~-~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~ 250 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR 250 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHh-cCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence 57999999999999999999999999999988888766444444 775433 110 0 01111
Q ss_pred HhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 102 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 102 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.+ +.++++++..++.+.+.+.+.|+.+|.++.-+
T Consensus 251 ~l--k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd 284 (355)
T 1c1d_A 251 TL--DCSVVAGAANNVIADEAASDILHARGILYAPD 284 (355)
T ss_dssp HC--CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred hC--CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence 11 46777777776643335667777777665433
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=6.8e-05 Score=54.34 Aligned_cols=75 Identities=21% Similarity=0.379 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHHc---CCCE---EeeCCChHHHHHhc-------CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++ +++.+.+.+++ +... ..|-.+.+.+++.. ++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 999999999999999999999998 77666554433 3221 23444444333322 48
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 86 id~vi~~Ag~ 95 (258)
T 3afn_B 86 IDVLINNAGG 95 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=3.6e-05 Score=55.94 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=60.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~ 118 (173)
++++|.|+ |++|..+++.+...|++|+++++++++.+. ....|-.+.+.+++.. +++|++|++.|...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 47899998 999999999999999999999998765321 1011111222233322 57899999998642
Q ss_pred ------------------chHHHHHhhhcC--CEEEEeCCCC
Q 030694 119 ------------------PLMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 119 ------------------~~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
..+.+++.|++. |+++.+++..
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 116 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA 116 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence 123455555443 8999998654
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00013 Score=53.79 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=68.2
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCc
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
+.....++++.+||-+|+|. |..+..+++..|++|++++.+++..+.+++.+ |. -.++.. +.. ++.+.+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~---~~~~~f 130 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GWE---QFDEPV 130 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CGG---GCCCCC
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Chh---hCCCCe
Confidence 33444458899999999874 77777888777899999999999888887743 21 122222 111 122689
Q ss_pred cEEEEc-----CCC---ccchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDT-----VSA---VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+.. ++. ...+..+.+.|+|||+++...
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999865 221 124667889999999988764
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.85 E-value=2.3e-05 Score=57.68 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=64.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH-------hcCCccEEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA-------AMGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-------~~~~~d~vid 112 (173)
-.+++++|.|+ |++|...++.+...|++|++++++.++...... . ..|-.+.+...+ ..+++|++|+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH-L----PGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEE-C----CCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhc-c----CcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35789999998 999999999999999999999988765432211 1 123333332222 2358999999
Q ss_pred cCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 113 TVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 113 ~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+.|... ..+.++..|+ .+|+++.+++..+
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~ 156 (266)
T 3uxy_A 101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG 156 (266)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence 999631 1223444444 3689999986554
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=1.7e-05 Score=57.28 Aligned_cols=96 Identities=23% Similarity=0.123 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---C-CEEeeCCChHHHHHhc-CCccEE-EEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---A-DSFLVSRDQDEMQAAM-GTMDGI-IDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~-~~~d~v-id~~ 114 (173)
.+|.+||-+|+| +|..+..+++..+.++++++.+++-++.+++... . ..++..+..+...... +.||.+ +|++
T Consensus 59 ~~G~rVLdiG~G-~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCT-TSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCC-ccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 789999999997 5777777777667799999999998888887322 1 1222222122221222 368888 4655
Q ss_pred CCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 115 SAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
... ..+..+.+.|+|||+++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 442 13456889999999998874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00013 Score=52.72 Aligned_cols=98 Identities=16% Similarity=0.205 Sum_probs=58.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHH-H-------hcCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ-A-------AMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~-------~~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+.. |++|+++++++++.+.+.+ ......+..+-.+... + ..+++|++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 4688999998 9999999888765 8899999999888877766 4322222221111110 0 1137999999
Q ss_pred cCCCcc-------------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 113 TVSAVH-------------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 113 ~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
+.|... ....++..++ .+|+++.+++..+
T Consensus 82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~ 136 (245)
T 3e9n_A 82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAG 136 (245)
T ss_dssp CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----
T ss_pred CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccc
Confidence 998631 0223344443 4689999886554
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.5e-05 Score=55.92 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=63.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCCEE---eeCCChHHHHHh----c-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADSF---LVSRDQDEMQAA----M----- 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~----~----- 104 (173)
.+++++|.|+ +++|...++.+...|++|+++ .+++++.+...+.+ +.... .|-.+.+.++.. .
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 5789999998 999999999999999999886 55555555444322 32211 233333322221 1
Q ss_pred ----CCccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 105 ----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 105 ----~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++|++|++.|... ..+.++..++++|+++.+++..+
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~ 151 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 151 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence 24999999998631 11233344556789999986543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=97.84 E-value=7e-05 Score=56.37 Aligned_cols=99 Identities=19% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-EE---eeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF---LVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v---~~~~~~~~~~~~~~~~d~vi 111 (173)
.++.+|||.|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|-.+.+.+.+...++|++|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 46789999998 99999999999999999999999887765554422 221 12 24344444444455899999
Q ss_pred EcCCCcc--------------chHHHHHhhhc---CCEEEEeCCC
Q 030694 112 DTVSAVH--------------PLMPLIGLLKS---QGKLVLLGAP 139 (173)
Q Consensus 112 d~~g~~~--------------~~~~~~~~l~~---~G~~v~~g~~ 139 (173)
.+.+... ....+++.+++ .++++.+++.
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 9998541 01234444432 3689988753
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0001 Score=60.53 Aligned_cols=100 Identities=17% Similarity=0.230 Sum_probs=62.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---------CcchHHHHHHH---cCCCEEeeCCChHHHHHhc---
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAVER---LGADSFLVSRDQDEMQAAM--- 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~---------~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~--- 104 (173)
-.|++++|.|+ +++|...++.+...|++|+++++ +.++.+.+.++ .+...+.|..+.+...++.
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~ 96 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA 96 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence 35789999998 89999999999999999999877 55555444332 3555566666654333322
Q ss_pred ----CCccEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCC
Q 030694 105 ----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPE 140 (173)
Q Consensus 105 ----~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 140 (173)
+++|++|++.|... ..+.++..|+. .|++|.+++..
T Consensus 97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a 163 (613)
T 3oml_A 97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS 163 (613)
T ss_dssp --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHH
T ss_pred HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence 37999999999631 12345555644 47999988643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.84 E-value=7.1e-05 Score=54.54 Aligned_cols=72 Identities=22% Similarity=0.297 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~------~~~~d~vi 111 (173)
.+++++|.|+ +++|...++.+...|++|++++++.++. ..+ ++... ..|-.+.+.+++. .+++|+++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv 84 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VAD-LGDRARFAAADVTDEAAVASALDLAETMGTLRIVV 84 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHH-TCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHh-cCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 4789999998 9999999999999999999999865432 233 55332 2344444433322 25899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 85 ~nAg~ 89 (257)
T 3tl3_A 85 NCAGT 89 (257)
T ss_dssp ECGGG
T ss_pred ECCCC
Confidence 99984
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00012 Score=53.93 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=70.1
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC--C-EEeeCCChHHHHHhc-CCcc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA--D-SFLVSRDQDEMQAAM-GTMD 108 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~--~-~v~~~~~~~~~~~~~-~~~d 108 (173)
..+.++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++.+ +. . .++..+..+. +. +.+|
T Consensus 108 ~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D 183 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVD 183 (277)
T ss_dssp TTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEE
T ss_pred hCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccC
Confidence 3458899999999975 77888888875 469999999999888887743 42 1 1222111111 22 3699
Q ss_pred EEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 109 GIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 109 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+++...+.+ ..+..+.+.|+++|+++....
T Consensus 184 ~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 184 ALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred EEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999877765 567889999999999988753
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00015 Score=52.14 Aligned_cols=71 Identities=21% Similarity=0.310 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCC---hHHHHH---hcCCccEEEEcC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD---QDEMQA---AMGTMDGIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~---~~~~~~---~~~~~d~vid~~ 114 (173)
+++++|.|+ |++|...++.+...|++|+++++++++ ..++ ++...+ .|-.+ ....++ ..+++|+++++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQS-LGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHH-HTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHh-hCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999998 999999999999999999999998876 2233 553221 23222 112222 235899999999
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 79 g~ 80 (239)
T 2ekp_A 79 AV 80 (239)
T ss_dssp CC
T ss_pred CC
Confidence 85
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.83 E-value=3e-05 Score=54.09 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCccEEE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
++++++||-+|+|. |..+..+++..+ .+|++++.+++..+.+++.+ |. -.++..+..+......+.+|+++
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 37889999999874 677777777754 59999999999888887742 22 12332222222112235799998
Q ss_pred EcCCC---------------ccchHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSA---------------VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~---------------~~~~~~~~~~l~~~G~~v~~g 137 (173)
...+- ...+..+.+.|+++|+++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 66533 125778889999999998775
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.83 E-value=9.5e-05 Score=53.26 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh---------
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA--------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~--------- 103 (173)
.++++||.+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+...+.
T Consensus 59 ~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 59 SGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 568899999987 588888888887 569999999999888887743 421 23332222323322
Q ss_pred ------c-CCccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 104 ------M-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 104 ------~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
. +.+|+|+...... ..+..+.+.|++||+++...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 6799999876654 24567889999999998764
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=9.6e-05 Score=54.35 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHc----CCCE---EeeCCCh----HHHHHh-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERL----GADS---FLVSRDQ----DEMQAA----- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~----g~~~---v~~~~~~----~~~~~~----- 103 (173)
.+++++|.|+ |++|..+++.+...|++|+++++ ++++.+.+.+++ +... ..|-.+. +.+++.
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4688999998 99999999999999999999999 877766655433 4322 1243344 333322
Q ss_pred --cCCccEEEEcCCC
Q 030694 104 --MGTMDGIIDTVSA 116 (173)
Q Consensus 104 --~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 90 ~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 2489999999984
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=2.5e-05 Score=56.46 Aligned_cols=94 Identities=21% Similarity=0.208 Sum_probs=62.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHH----h---c--CCcc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQA----A---M--GTMD 108 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~----~---~--~~~d 108 (173)
..+++++|.|+ |++|...++.+...|++|+++++++++.. +.... .|-.+.+.+++ + . +++|
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD 78 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD 78 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 45789999998 99999999999999999999999876542 11111 22222222222 1 2 5899
Q ss_pred EEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 109 GIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++.|... ..+.+++.|+++|+++.+++..
T Consensus 79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 9999998420 1123345555678999998654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0002 Score=52.53 Aligned_cols=76 Identities=21% Similarity=0.255 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHH---cCCC-E--EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVER---LGAD-S--FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~-------~~ 105 (173)
..+++++|.|+ |++|...++.+...|++|++++ ++.++.+...+. .+.. . ..|-.+.+.+++. .+
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35788999998 9999999999999999999998 454444433322 2322 1 2344444333322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 103 ~id~li~nAg~ 113 (269)
T 3gk3_A 103 KVDVLINNAGI 113 (269)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 89999999985
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00014 Score=53.20 Aligned_cols=76 Identities=16% Similarity=0.248 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHH---HHcCCCE--EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV---ERLGADS--FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~-------~~ 105 (173)
.++++++|.|+ +++|...++.+...|++|+++++++...+.++ +..+... ..|-.+.+.+++. .+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56899999984 69999999999999999999998855433333 3344222 2344444433332 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 92 ~id~lv~nAg~ 102 (271)
T 3ek2_A 92 SLDGLVHSIGF 102 (271)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 89999999985
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.81 E-value=1.7e-05 Score=57.14 Aligned_cols=93 Identities=24% Similarity=0.258 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHH----h---c--CCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQA----A---M--GTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~----~---~--~~~d~ 109 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+ +.... .|-.+.+.+++ + . +++|+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~ 75 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG 75 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 3678999998 99999999999999999999999876532 11111 12222222222 1 2 58999
Q ss_pred EEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 110 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 110 vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|++.|... ..+.++..|+++|+++.+++..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 999998420 0233445555678999988644
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00012 Score=52.19 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhc-----CCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAM-----GTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~-----~~~ 107 (173)
.++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |. -.++..+..+...++. +.+
T Consensus 68 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 68 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 567899999987 677788888865 569999999999888887743 32 1233333233333332 579
Q ss_pred cEEEEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|+++...... ..+..+.+.|++||.++....
T Consensus 147 D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 147 DVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9998655432 246788899999999988653
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00012 Score=56.27 Aligned_cols=87 Identities=18% Similarity=0.327 Sum_probs=66.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++. +.+.+.+ .|... . .+.++....|+++-+++...
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~-~g~~~----~---~l~ell~~aDvV~l~~Plt~~T~ 245 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEE-NGVEP----A---SLEDVLTKSDFIFVVAAVTSENK 245 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHH-TTCEE----C---CHHHHHHSCSEEEECSCSSCC--
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhh-cCeee----C---CHHHHHhcCCEEEEcCcCCHHHH
Confidence 48899999999999999999999999999999875 3444445 66532 1 23345568999998887542
Q ss_pred -ch-HHHHHhhhcCCEEEEeC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g 137 (173)
.+ ...+..|++++.++.++
T Consensus 246 ~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEECS
T ss_pred hhcCHHHHhcCCCCcEEEECc
Confidence 12 47788899999999988
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00017 Score=52.55 Aligned_cols=70 Identities=19% Similarity=0.165 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-------cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~~~d~vid~ 113 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+ .....|-.+.+.+++. .+++|++|++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n 94 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF-----LAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN 94 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccc-----eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4789999998 9999999999999999999999987654321 0112344444333222 3579999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 95 Ag~ 97 (253)
T 2nm0_A 95 AGV 97 (253)
T ss_dssp CSC
T ss_pred CCC
Confidence 885
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.80 E-value=4.1e-05 Score=56.64 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=69.5
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
..++.+......+.+++|+|+|.+|..++..+...|++|++++++.++.+.+.+.+|.. +.+ + ..+...++|++
T Consensus 117 ~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiV 190 (275)
T 2hk9_A 117 LKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVI 190 (275)
T ss_dssp HHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEE
T ss_pred HHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEE
Confidence 33444433324678999999999999999999889999999999988877666545532 211 1 11233479999
Q ss_pred EEcCCCccch--HHH--HHhhhcCCEEEEeCC
Q 030694 111 IDTVSAVHPL--MPL--IGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~~~~--~~~--~~~l~~~G~~v~~g~ 138 (173)
+.|++..... ... ...++++..++.++.
T Consensus 191 i~atp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 191 VNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp EECSSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred EEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 9999976311 011 345677778877765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00016 Score=59.28 Aligned_cols=99 Identities=20% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc---------chHHHHHHH---cCCCEEeeCCChH----HHHHh-
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVER---LGADSFLVSRDQD----EMQAA- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---------~~~~~~~~~---~g~~~v~~~~~~~----~~~~~- 103 (173)
.+++++|.|+ +++|+..++.+...|++|++.+++. ++.+.+.++ .|...+.|..+.+ .+++.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 5788999998 8999999999999999999987654 444443332 3544455655532 22222
Q ss_pred --cCCccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCC
Q 030694 104 --MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPE 140 (173)
Q Consensus 104 --~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~ 140 (173)
.+++|+++++.|... ..+.++..|+ .+|++|.+++..
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~a 152 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA 152 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence 358999999999520 2345666664 358999998643
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.80 E-value=5.3e-05 Score=52.98 Aligned_cols=60 Identities=17% Similarity=0.297 Sum_probs=45.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc---CCccEEEEcCCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~~~d~vid~~g~ 116 (173)
+++|.|+ |.+|...++.+. .|++|++++++++ ....|-.+.+.+++.. +++|++|.+.|.
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~ 68 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS 68 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 7999998 999999999988 9999999998764 1233444544443332 469999999884
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.80 E-value=7e-05 Score=55.31 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CE---EeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DS---FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 104 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+.+.+++. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4788999998 99999999999999999999999988777665433 22 21 1344444333322 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|++.|.
T Consensus 85 g~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 GKIDVLVNNAGA 96 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 489999999984
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00021 Score=50.81 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=58.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHh-cCCccEEEEcCCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 118 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~~~d~vid~~g~~~ 118 (173)
+++|+|+|.+|..+++.+...|.+|+++++++++.+.+.+..|...+. |..+.+.+.+. ..++|+++-+++...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 589999999999999999999999999999999988876646654322 34445555544 458999999999874
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.80 E-value=9.8e-05 Score=56.09 Aligned_cols=90 Identities=19% Similarity=0.263 Sum_probs=67.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.+.+|.|+|.|.+|...++.++..|++|++.+++.++.+.+.+ .|.... + ..+.....|+++.+++...
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~---l~e~l~~aDvVi~~vp~~~~t~ 225 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQAEFV----S---TPELAAQSDFIVVACSLTPATE 225 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TTCEEC----C---HHHHHHHCSEEEECCCCCTTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh-cCceeC----C---HHHHHhhCCEEEEeCCCChHHH
Confidence 5789999999999999999999999999999988776666554 564321 2 2233346899999998642
Q ss_pred -ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 226 ~~i~~~~~~~mk~gailIn~srg 248 (330)
T 2gcg_A 226 GLCNKDFFQKMKETAVFINISRG 248 (330)
T ss_dssp TCBSHHHHHHSCTTCEEEECSCG
T ss_pred HhhCHHHHhcCCCCcEEEECCCC
Confidence 23 3567788888888877643
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=7.9e-05 Score=57.01 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++.|+|.|.+|...++.++..|++|++.+++.++. .... +|...+ . + +.++....|+++-+++...
T Consensus 166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~g~~~~-~--~---l~ell~~aDvV~l~~P~t~~t 237 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERA-LGLQRV-S--T---LQDLLFHSDCVTLHCGLNEHN 237 (347)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHH-HTCEEC-S--S---HHHHHHHCSEEEECCCCCTTC
T ss_pred CCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhh-cCCeec-C--C---HHHHHhcCCEEEEcCCCCHHH
Confidence 368899999999999999999999999999999876643 2333 675322 1 1 2234446899998887531
Q ss_pred --ch-HHHHHhhhcCCEEEEeCCCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+ ...+..|+++..++.++...
T Consensus 238 ~~li~~~~l~~mk~gailIN~arg~ 262 (347)
T 1mx3_A 238 HHLINDFTVKQMRQGAFLVNTARGG 262 (347)
T ss_dssp TTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred HHHhHHHHHhcCCCCCEEEECCCCh
Confidence 23 46678888988888887543
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.79 E-value=8.4e-05 Score=55.51 Aligned_cols=88 Identities=20% Similarity=0.183 Sum_probs=65.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH--
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM-- 121 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-- 121 (173)
.+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|... .. ...+... .|++|.|++.+..+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~---~~---~~~~~~~-aDvvi~~vp~~~~~~~v 87 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-AGATL---AD---SVADVAA-ADLIHITVLDDAQVREV 87 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-TTCEE---CS---SHHHHTT-SSEEEECCSSHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-CCCEE---cC---CHHHHHh-CCEEEEECCChHHHHHH
Confidence 57999999999999999999899999999999999998888 66432 11 2233455 899999999763333
Q ss_pred --HHHHhhhcCCEEEEeCCC
Q 030694 122 --PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 122 --~~~~~l~~~G~~v~~g~~ 139 (173)
.....++++..++..+..
T Consensus 88 ~~~l~~~l~~g~ivv~~st~ 107 (296)
T 3qha_A 88 VGELAGHAKPGTVIAIHSTI 107 (296)
T ss_dssp HHHHHTTCCTTCEEEECSCC
T ss_pred HHHHHHhcCCCCEEEEeCCC
Confidence 344455666677776643
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0001 Score=53.36 Aligned_cols=99 Identities=21% Similarity=0.173 Sum_probs=66.7
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~d~ 109 (173)
....++++.+||-+|+|. |..+..+++..|++|++++.+++.++.+++.. |. -.++..+..+.. ..+.+|+
T Consensus 30 ~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~ 106 (256)
T 1nkv_A 30 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--ANEKCDV 106 (256)
T ss_dssp HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--CSSCEEE
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC--cCCCCCE
Confidence 334458899999999974 77778888888899999999998888776632 32 122222211111 1347999
Q ss_pred EEEcCCC------ccchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSA------VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~------~~~~~~~~~~l~~~G~~v~~g 137 (173)
|+..... ...+..+.+.|+|||+++...
T Consensus 107 V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 107 AACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 9853221 123667788999999988753
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.78 E-value=8.5e-05 Score=53.98 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=50.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~ 105 (173)
.+++++||.|+ |++|...++.+...|++|++++ ++.++.+...+. .+.. .. .|-.+.+.+++. .+
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 56889999998 9999999999999999999988 555554433322 3422 22 233443332222 34
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 91 ~id~lv~~Ag~ 101 (256)
T 3ezl_A 91 EIDVLVNNAGI 101 (256)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999985
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00012 Score=55.07 Aligned_cols=88 Identities=24% Similarity=0.247 Sum_probs=64.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+ .|.. + ..+.. +...+.|++|.|++.+..+...
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~-~--~~~~~---~~~~~~DvVi~av~~~~~~~~v 103 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-EGAR-L--GRTPA---EVVSTCDITFACVSDPKAAKDL 103 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-TTCE-E--CSCHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-cCCE-E--cCCHH---HHHhcCCEEEEeCCCHHHHHHH
Confidence 67999999999999999888899999999999999888877 6643 2 11221 2223689999999965445555
Q ss_pred HH-------hhhcCCEEEEeCC
Q 030694 124 IG-------LLKSQGKLVLLGA 138 (173)
Q Consensus 124 ~~-------~l~~~G~~v~~g~ 138 (173)
+. .++++..++.++.
T Consensus 104 ~~~~~~~~~~l~~~~~vv~~s~ 125 (316)
T 2uyy_A 104 VLGPSGVLQGIRPGKCYVDMST 125 (316)
T ss_dssp HHSTTCGGGGCCTTCEEEECSC
T ss_pred HcCchhHhhcCCCCCEEEECCC
Confidence 53 3556677776764
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0001 Score=56.08 Aligned_cols=87 Identities=23% Similarity=0.302 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ +|... .+ ..+.....|+++.+++...
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~---l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-LKARY----MD---IDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-HTEEE----CC---HHHHHHHCSEEEECCCCCTTT
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee----cC---HHHHHhhCCEEEEcCCCChHH
Confidence 46789999999999999999999999999999998876 44544 66421 12 2233346899999998751
Q ss_pred --chH-HHHHhhhcCCEEEEeC
Q 030694 119 --PLM-PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 --~~~-~~~~~l~~~G~~v~~g 137 (173)
.+. ..+..|+++ .++.++
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECS
T ss_pred HHHhCHHHHhhCCCC-EEEECC
Confidence 232 457788888 777776
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00022 Score=53.78 Aligned_cols=76 Identities=24% Similarity=0.334 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC----------cchHHHHHHH---cCCCEEe---eCCChHHHHHh
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAVER---LGADSFL---VSRDQDEMQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~----------~~~~~~~~~~---~g~~~v~---~~~~~~~~~~~ 103 (173)
-.++++||.|+ |++|...++.+...|++|++++++ .++.+.+.++ .+..... |-.+.+.+.+.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 35789999998 999999999999999999999887 4555444432 3432222 33333333222
Q ss_pred -------cCCccEEEEcCCC
Q 030694 104 -------MGTMDGIIDTVSA 116 (173)
Q Consensus 104 -------~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 2489999999996
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00011 Score=55.09 Aligned_cols=92 Identities=21% Similarity=0.288 Sum_probs=66.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
...+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|... ..+. .+.....|++|.|++.+..+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~---~~~~---~e~~~~aDvVi~~vp~~~~~~ 80 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-AGAHL---CESV---KAALSASPATIFVLLDNHATH 80 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-HTCEE---CSSH---HHHHHHSSEEEECCSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCee---cCCH---HHHHhcCCEEEEEeCCHHHHH
Confidence 3467999999999999999999999999999999999988887 57532 1111 122335899999999774344
Q ss_pred HHH-----HhhhcCCEEEEeCCCC
Q 030694 122 PLI-----GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 122 ~~~-----~~l~~~G~~v~~g~~~ 140 (173)
..+ ..+.++..++.++...
T Consensus 81 ~v~~~~~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 81 EVLGMPGVARALAHRTIVDYTTNA 104 (306)
T ss_dssp HHHTSTTHHHHTTTCEEEECCCCC
T ss_pred HHhcccchhhccCCCEEEECCCCC
Confidence 433 3355667777776543
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00025 Score=52.58 Aligned_cols=91 Identities=23% Similarity=0.239 Sum_probs=61.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc------------CCC---------EEeeCCChHHHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL------------GAD---------SFLVSRDQDEMQA 102 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~------------g~~---------~v~~~~~~~~~~~ 102 (173)
++|.|+|+|.+|...++.+...|++|+++++++++.+.+.+.. +.. .+.-. ....+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~---~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS---DDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE---SCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe---CCHHH
Confidence 6899999999999999999999999999999999887776631 110 00000 11223
Q ss_pred hcCCccEEEEcCCCc-----cchHHHHHhhhcCCEEEEeC
Q 030694 103 AMGTMDGIIDTVSAV-----HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 103 ~~~~~d~vid~~g~~-----~~~~~~~~~l~~~G~~v~~g 137 (173)
...+.|++|++++.. ..+..+...++++..++...
T Consensus 82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 345899999999975 12334445556666555443
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.76 E-value=8.9e-05 Score=53.36 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc-CCC-E--EeeCCChHHHHHhc-------C--
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL-GAD-S--FLVSRDQDEMQAAM-------G-- 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~-g~~-~--v~~~~~~~~~~~~~-------~-- 105 (173)
.+++++|.|+ |++|..+++.+...| ++|+++++++++.+.+.+ . +.. . ..|-.+.+.+++.. +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-ccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 3678999998 999999999999999 999999999888877765 4 222 1 23444443333322 2
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
++|++|.+.|..
T Consensus 81 ~id~li~~Ag~~ 92 (250)
T 1yo6_A 81 GLSLLINNAGVL 92 (250)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCccc
Confidence 799999999853
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00022 Score=52.38 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
.++++++|.|+ |++|..+++.+...|++|+++ .+++++.+.+.+.+ +... ..|-.+.+.+++. .+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 45789999998 999999999999999999887 66666655554432 3222 1244444333222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 104 ~id~li~nAg~ 114 (272)
T 4e3z_A 104 RLDGLVNNAGI 114 (272)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999985
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00022 Score=52.04 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHH----HHh----cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEM----QAA----MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~----~~~----~~~ 106 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+ +++ .++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4688999998 99999999999999999999999988776655433 4221 1244443322 222 458
Q ss_pred ccEEEEcCC
Q 030694 107 MDGIIDTVS 115 (173)
Q Consensus 107 ~d~vid~~g 115 (173)
+|++|++.|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 999999994
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0001 Score=53.60 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhcC--CccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAMG--TMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~--~~d~v 110 (173)
.++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+......+ .+|+|
T Consensus 62 ~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 62 TQAKRILEIGTL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred cCCCEEEEecCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 567899999987 477777888876 569999999999888887743 422 2333332333443333 79999
Q ss_pred EEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+-..... ..+..+.+.|+|||.++....
T Consensus 141 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8544432 246678899999999987654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00033 Score=52.11 Aligned_cols=92 Identities=21% Similarity=0.270 Sum_probs=63.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-----chHHHHHH--HcCCCE-EeeCCChHHHHHhcCCccEEEEc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAVE--RLGADS-FLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-----~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
..+|+|+|+ |.+|..+++.+...|.+|++++|+. ++.+.+.. ..+... ..|..+.+.+.+...++|++|.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 457999998 9999999999999999999999984 34433332 123322 23555666666777799999999
Q ss_pred CCCc------cchHHHHHhhhcCC---EEE
Q 030694 114 VSAV------HPLMPLIGLLKSQG---KLV 134 (173)
Q Consensus 114 ~g~~------~~~~~~~~~l~~~G---~~v 134 (173)
.+.. .....+++.++..| +++
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 9854 12334555555444 676
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00014 Score=53.13 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=64.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|+|.+|...+..+...|..|.++++++++.+.+.+.+|... ..+. .+...+.|++|.|++.. .....
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~---~~~~~~~D~Vi~~v~~~-~~~~v 76 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSH---QDLIDQVDLVILGIKPQ-LFETV 76 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSH---HHHHHTCSEEEECSCGG-GHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCH---HHHHhcCCEEEEEeCcH-hHHHH
Confidence 47999999999999988888888899999999998888876567531 1222 12233799999999944 56777
Q ss_pred HHhhhcCCEEEEe
Q 030694 124 IGLLKSQGKLVLL 136 (173)
Q Consensus 124 ~~~l~~~G~~v~~ 136 (173)
+..++++..++..
T Consensus 77 ~~~l~~~~~vv~~ 89 (259)
T 2ahr_A 77 LKPLHFKQPIISM 89 (259)
T ss_dssp HTTSCCCSCEEEC
T ss_pred HHHhccCCEEEEe
Confidence 7777766666655
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00016 Score=54.73 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=63.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++|||+|+ |.+|..+++.+...|++|+++++++++ .+... ..|..+.+.+.+...++|++|.+.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~ 89 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS 89 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence 45788999998 999999999999999999999998765 22222 3455566666677779999999988541
Q ss_pred c---------------hHHHHHhhhcC--CEEEEeCC
Q 030694 119 P---------------LMPLIGLLKSQ--GKLVLLGA 138 (173)
Q Consensus 119 ~---------------~~~~~~~l~~~--G~~v~~g~ 138 (173)
. ...+++.++.. ++++.+++
T Consensus 90 ~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 90 WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 1 12344444433 48888765
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00029 Score=52.73 Aligned_cols=92 Identities=13% Similarity=0.171 Sum_probs=63.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc------chHHHHHH--HcCCCE-EeeCCChHHHHHhcCCccEEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------SKKSEAVE--RLGADS-FLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~d~vid 112 (173)
..+|+|+|+ |.+|..+++.+...|++|++++|+. ++.+.+.. ..+... ..|..+.+.+.+...++|++|.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467999998 9999999999999999999999986 23333322 134332 2455666667777779999999
Q ss_pred cCCCcc--chHHHHHhhhcC---CEEE
Q 030694 113 TVSAVH--PLMPLIGLLKSQ---GKLV 134 (173)
Q Consensus 113 ~~g~~~--~~~~~~~~l~~~---G~~v 134 (173)
+.+... ....+++.++.. ++++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEe
Confidence 998642 234555555443 3666
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00015 Score=53.80 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=63.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-------chHHHHHH--HcCCCE-EeeCCChHHHHHhcCCccEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-------SKKSEAVE--RLGADS-FLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~d~vi 111 (173)
+++|+|+|+ |.+|..+++.+...|.+|++++|++ ++.+.+++ ..+... ..|..+.+.+.+...++|++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 467999998 9999999999888999999999986 44443332 134432 245556666667777999999
Q ss_pred EcCCCcc--chHHHHHhhhcC---CEEE
Q 030694 112 DTVSAVH--PLMPLIGLLKSQ---GKLV 134 (173)
Q Consensus 112 d~~g~~~--~~~~~~~~l~~~---G~~v 134 (173)
.+.+... ....+++.++.. .+++
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9998642 223445555433 4666
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0003 Score=51.81 Aligned_cols=86 Identities=21% Similarity=0.188 Sum_probs=62.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+ .|.. ... .+ ..+. .+.|++|-|++.. .....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~--~~---~~~~-~~~D~vi~av~~~-~~~~~ 73 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAG--QD---LSLL-QTAKIIFLCTPIQ-LILPT 73 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEE--SC---GGGG-TTCSEEEECSCHH-HHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCCcccc--CC---HHHh-CCCCEEEEECCHH-HHHHH
Confidence 6889999999999999988899999999999998888876 7743 222 11 1234 5899999999976 34444
Q ss_pred HH----hhhcCCEEEEeCC
Q 030694 124 IG----LLKSQGKLVLLGA 138 (173)
Q Consensus 124 ~~----~l~~~G~~v~~g~ 138 (173)
+. .++++..++.++.
T Consensus 74 ~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 74 LEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp HHHHGGGSCTTCEEEECCS
T ss_pred HHHHHhhCCCCCEEEECCC
Confidence 43 3455666766654
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=55.24 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=65.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~---- 117 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++..+.+.. .|...+ +.+.++....|+++-+++..
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~~~------~~l~ell~~sDvV~l~~Plt~~T~ 242 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAIYH------DTLDSLLGASDIFLIAAPGRPELK 242 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCEEC------SSHHHHHHTCSEEEECSCCCGGGT
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCeEe------CCHHHHHhhCCEEEEecCCCHHHH
Confidence 47899999999999999999999999999999886544322 243221 12334455789999998853
Q ss_pred cch-HHHHHhhhcCCEEEEeCC
Q 030694 118 HPL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 ~~~-~~~~~~l~~~G~~v~~g~ 138 (173)
..+ ...+..|+++..++.++.
T Consensus 243 ~li~~~~l~~mk~gailIN~aR 264 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISR 264 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 122 467788999999988874
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.72 E-value=9.2e-05 Score=55.14 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--------CCCE---EeeCCChHHHHHh------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------GADS---FLVSRDQDEMQAA------ 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~------ 103 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+++.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 4789999998 99999999999999999999999988776654433 2221 1344444433332
Q ss_pred -cCCccEEEEcCCC
Q 030694 104 -MGTMDGIIDTVSA 116 (173)
Q Consensus 104 -~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 97 ~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 TFGKINFLVNNGGG 110 (303)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 2479999999983
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00048 Score=52.58 Aligned_cols=96 Identities=16% Similarity=0.083 Sum_probs=64.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH--HHHHHHc-CCCE-Eee-CCChHHHHHhcCCccEEEEcCCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAVERL-GADS-FLV-SRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~--~~~~~~~-g~~~-v~~-~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+.+|+|+|+ |.+|..+++.+...|++|+++++++++. +.+.. . +... ..| ..+.+.+.+...++|++|.+.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 567999998 9999999999888999999999987765 23322 2 2221 234 44566666667789999987764
Q ss_pred c--c---chHHHHHhhhc-C--CEEEEeCCC
Q 030694 117 V--H---PLMPLIGLLKS-Q--GKLVLLGAP 139 (173)
Q Consensus 117 ~--~---~~~~~~~~l~~-~--G~~v~~g~~ 139 (173)
. . ....+++.++. + ++++.+++.
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 3 0 11234444433 3 588888754
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00064 Score=50.20 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=68.1
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEE
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
++..... ..+++++|+|+|++|.+++..++..|+ +|+++.|+.+|.+.+.+.++.. . ... .. ...+|++|
T Consensus 110 ~l~~~~~-~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~~-~~-----~~~~DivI 180 (271)
T 1npy_A 110 LIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-INS-LE-----NQQADILV 180 (271)
T ss_dssp HHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ESC-CT-----TCCCSEEE
T ss_pred HHHHhCC-CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-chh-hh-----cccCCEEE
Confidence 3444333 467899999999999999999999998 8999999998877777667752 2 111 11 24799999
Q ss_pred EcCCCccc-------hHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVHP-------LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~~-------~~~~~~~l~~~G~~v~~g~ 138 (173)
+|++.... ..-....++++..++.+-.
T Consensus 181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY 214 (271)
T 1npy_A 181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA 214 (271)
T ss_dssp ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred ECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence 99996521 1111345677777777754
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00033 Score=52.99 Aligned_cols=75 Identities=17% Similarity=0.174 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-----cchHHHHHHH---cCCCE---EeeCCChHHHHHh------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-----PSKKSEAVER---LGADS---FLVSRDQDEMQAA------ 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-----~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~------ 103 (173)
.+++++|.|+ |++|...++.+...|++|+++.++ .++.+.+.+. .+... ..|-.+.+.+.+.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 3678999998 999999999999999999998775 3333333321 34322 2344444333222
Q ss_pred -cCCccEEEEcCCC
Q 030694 104 -MGTMDGIIDTVSA 116 (173)
Q Consensus 104 -~~~~d~vid~~g~ 116 (173)
.+++|++|++.|.
T Consensus 84 ~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 84 EDGRIDVLIHNAGH 97 (324)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 2489999999994
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00022 Score=53.73 Aligned_cols=100 Identities=20% Similarity=0.165 Sum_probs=68.7
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCcc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d 108 (173)
....++++++||.+|+|. |..+..+++..+ .+|++++.+++..+.+++.+ |.. .++..+..+.. ...+.+|
T Consensus 69 ~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD 146 (317)
T 1dl5_A 69 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYD 146 (317)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEE
T ss_pred HhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCCCeE
Confidence 334458999999999875 777777777643 36999999999888887743 422 22222211111 1135799
Q ss_pred EEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 109 GIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 109 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
+|+...........+.+.|+|||+++..-
T Consensus 147 ~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 147 VIFVTVGVDEVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred EEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 99988776655678889999999988764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00038 Score=51.86 Aligned_cols=90 Identities=14% Similarity=0.189 Sum_probs=61.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.+|||+|+ |.+|..+++.+...|.+|+++++++.+.+ +. +... ..|.. .+.+.+...++|++|.+.+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 68999998 99999999999999999999999855544 32 3322 23445 66666677799999999986421
Q ss_pred -----------hHHHHHhhhcC--CEEEEeCC
Q 030694 120 -----------LMPLIGLLKSQ--GKLVLLGA 138 (173)
Q Consensus 120 -----------~~~~~~~l~~~--G~~v~~g~ 138 (173)
...+++.++.. .+++.+++
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 13445555444 36887764
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00014 Score=53.77 Aligned_cols=96 Identities=20% Similarity=0.093 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHc-----C----CCEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERL-----G----ADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~-----g----~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
...++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++.+ + .-.++..+..+.+.+..+.+|+|
T Consensus 74 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGG-DGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCT-TCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCc-hHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 356899999986 3555566666555 49999999999888887754 2 12344444455554444589999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-....+ ..+..+.+.|+++|.++...
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8655432 24678889999999998874
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00033 Score=50.87 Aligned_cols=96 Identities=16% Similarity=0.099 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHh------cCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~------~~~ 106 (173)
.++++||-+|+| .|..+..+++.. +.+|+.++.+++..+.+++.+ |. -.++..+..+.+... .+.
T Consensus 78 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 78 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 457899999986 466777777775 579999999999888887643 32 123333333444443 357
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
||+||-..... ..+..+++.|+|||.++.-.
T Consensus 157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998554332 24668889999999998754
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00028 Score=54.31 Aligned_cols=70 Identities=26% Similarity=0.250 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
-+|++|+|+|.|.+|..+++.+...|++|++.+++.++++.+.+++|++.+ +.. +. +...+|+++-|...
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~--~l---l~~~~DIvip~a~~ 240 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APN--AI---YGVTCDIFAPCALG 240 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGG--GT---TTCCCSEEEECSCS
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChH--HH---hccCCcEeeccchH
Confidence 578999999999999999999999999999999998888866665776433 211 10 11256776666543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=97.70 E-value=6.1e-05 Score=54.38 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=57.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~ 118 (173)
++++|.|+ |.+|..+++.+...|++|+++++++++.+. ....|-.+.+.+++. .+++|++|.+.|...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 47999998 999999999999999999999998765321 000111112222222 258999999998542
Q ss_pred ------------------chHHHHHhhhcC--CEEEEeCCCC
Q 030694 119 ------------------PLMPLIGLLKSQ--GKLVLLGAPE 140 (173)
Q Consensus 119 ------------------~~~~~~~~l~~~--G~~v~~g~~~ 140 (173)
.++.+++.++.. ++++.+++..
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 116 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIA 116 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccc
Confidence 112333344333 8999987643
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00042 Score=53.19 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=66.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
..+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|... ..+....-+....+|+||-|++.. .+..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~---~~s~~e~~~~a~~~DvVi~~vp~~-~v~~ 96 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-EGIAG---ARSIEEFCAKLVKPRVVWLMVPAA-VVDS 96 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TTCBC---CSSHHHHHHHSCSSCEEEECSCGG-GHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-CCCEE---eCCHHHHHhcCCCCCEEEEeCCHH-HHHH
Confidence 468999999999999999999999999999999999888877 56431 122222211123569999999987 4554
Q ss_pred HH----HhhhcCCEEEEeCCCC
Q 030694 123 LI----GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 123 ~~----~~l~~~G~~v~~g~~~ 140 (173)
.+ ..++++..++.++...
T Consensus 97 vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 97 MLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHHHGGGCCTTCEEEECSSCC
T ss_pred HHHHHHhhCCCCCEEEeCCCCC
Confidence 44 3455666777766443
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00028 Score=52.89 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=66.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
++|-++|.|.+|...++-+...|++|+++++++++.+.+.+ .|+... + ...+.....|++|-|+++.......
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~-~Ga~~a-~-----s~~e~~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-AGASAA-R-----SARDAVQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCEEC-S-----SHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-cCCEEc-C-----CHHHHHhcCCceeecCCchHHHHHH
Confidence 57899999999999888888899999999999999999988 776422 1 1233455788888888887555544
Q ss_pred H-------HhhhcCCEEEEeCCCC
Q 030694 124 I-------GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~~ 140 (173)
+ ..+++|..+|.++...
T Consensus 77 ~~~~~g~~~~~~~g~iiId~sT~~ 100 (300)
T 3obb_A 77 YLDDDGLLAHIAPGTLVLECSTIA 100 (300)
T ss_dssp HHSSSSSTTSCCC-CEEEECSCCC
T ss_pred HhchhhhhhcCCCCCEEEECCCCC
Confidence 4 2345666777776544
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00015 Score=55.51 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCE-EeeCC-ChHHHHHhcCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADS-FLVSR-DQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~-~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.+.+|||+|+ |.+|..+++.+... |++|++++++.++...+...-+... ..|.. +.+.+.+...++|+||.+.+..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~ 102 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIA 102 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccc
Confidence 3578999998 99999999988887 8999999998877655433122222 23444 5555665666899999988854
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00028 Score=53.82 Aligned_cols=94 Identities=19% Similarity=0.139 Sum_probs=67.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
..+|.|+|.|.+|...++.++..|.+|+++++++++.+.+.+ .|.... .+..+.+.+...+.|+||-|++.. .+..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-~G~~~~--~~~~e~~~~a~~~aDlVilavP~~-~~~~ 83 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-EGFDVS--ADLEATLQRAAAEDALIVLAVPMT-AIDS 83 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-TTCCEE--SCHHHHHHHHHHTTCEEEECSCHH-HHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeee--CCHHHHHHhcccCCCEEEEeCCHH-HHHH
Confidence 467999999999999999999999999999999999988887 887432 111222222223679999999965 3444
Q ss_pred HHHh---hhcCCEEEEeCCCC
Q 030694 123 LIGL---LKSQGKLVLLGAPE 140 (173)
Q Consensus 123 ~~~~---l~~~G~~v~~g~~~ 140 (173)
.+.. ++++..++.+++..
T Consensus 84 vl~~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 84 LLDAVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp HHHHHHHHCTTCCEEECCSCS
T ss_pred HHHHHHccCCCCEEEEcCCCC
Confidence 3332 35666777776543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00013 Score=53.45 Aligned_cols=71 Identities=14% Similarity=0.189 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.++++||.|+ |++|...++.+...|++|++++++.++.... ... ...|-.+.+.+++. .+++|++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP----DIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST----TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC----ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 5789999998 9999999999999999999999987653221 111 12244444433332 248999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 103 nAg~ 106 (260)
T 3un1_A 103 NAGV 106 (260)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00017 Score=54.87 Aligned_cols=87 Identities=21% Similarity=0.212 Sum_probs=64.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++.++. +.+ . ... . .+ ..++....|+++.+++...
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~-~~~-~--~~---l~ell~~aDvV~l~~p~~~~t~ 214 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-K-GYY-V--DS---LDDLYKQADVISLHVPDVPANV 214 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-T-TCB-C--SC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-h-Cee-c--CC---HHHHHhhCCEEEEcCCCcHHHH
Confidence 47899999999999999999999999999999987654 333 3 221 1 11 2334457899999998642
Q ss_pred -ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|++++.++.++.
T Consensus 215 ~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 215 HMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHhHHHHhhCCCCcEEEECCC
Confidence 12 356788999999998875
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00021 Score=54.44 Aligned_cols=91 Identities=19% Similarity=0.188 Sum_probs=61.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC---------CChHHHHHhcCCccEEEEcC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS---------RDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~---------~~~~~~~~~~~~~d~vid~~ 114 (173)
.+|.|+|+|.+|...+..+...|.+|+++++++++.+.+++..+. .+... .......+...++|++|-|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI-IAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE-EEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe-EEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 479999999999999888888999999999999988888773331 11000 00112223345899999999
Q ss_pred CCccchHHHHHh----hhcCCEEEEe
Q 030694 115 SAVHPLMPLIGL----LKSQGKLVLL 136 (173)
Q Consensus 115 g~~~~~~~~~~~----l~~~G~~v~~ 136 (173)
+... ....+.. ++++..++..
T Consensus 84 ~~~~-~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 84 PAIH-HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CGGG-HHHHHHHHGGGCCTTCEEEES
T ss_pred CchH-HHHHHHHHHHhCCCCCEEEEc
Confidence 9874 4544443 4455555555
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.4e-05 Score=55.76 Aligned_cols=85 Identities=19% Similarity=0.319 Sum_probs=61.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++.++.+. . .. . +.++++....|+++-+++...
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~-~~--~---~~l~ell~~aDiV~l~~P~t~~t~ 188 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------D-VI--S---ESPADLFRQSDFVLIAIPLTDKTR 188 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------S-EE--C---SSHHHHHHHCSEEEECCCCCTTTT
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------c-cc--c---CChHHHhhccCeEEEEeeccccch
Confidence 5789999999999999999999999999999988654321 1 11 1 122233446788888887421
Q ss_pred -ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..++.++.
T Consensus 189 ~li~~~~l~~mk~gailIN~aR 210 (290)
T 3gvx_A 189 GMVNSRLLANARKNLTIVNVAR 210 (290)
T ss_dssp TCBSHHHHTTCCTTCEEEECSC
T ss_pred hhhhHHHHhhhhcCceEEEeeh
Confidence 12 466778888888888874
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00054 Score=51.54 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CC-eEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~-~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
....++.|+|+|.+|...++.+... |. +|.++++++++.+.+.+.++. -.. ..+ ..+...+.|+|+.|++..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~--~~~---~~e~v~~aDiVi~atp~~ 207 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRV--CSS---VQEAVAGADVIITVTLAT 207 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEE--CSS---HHHHHTTCSEEEECCCCS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEE--eCC---HHHHHhcCCEEEEEeCCC
Confidence 5678999999999999888776654 87 899999999998888775663 112 122 223445799999999854
Q ss_pred c-chHHHHHhhhcCCEEEEeCCCC
Q 030694 118 H-PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 118 ~-~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
. .+.. ..++++-.++.+|...
T Consensus 208 ~~v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 208 EPILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp SCCBCG--GGSCTTCEEEECCCCS
T ss_pred CcccCH--HHcCCCcEEEeCCCCC
Confidence 2 1212 5678888888877543
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00016 Score=50.85 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=59.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-----------------CEEeeCCChHHHHH
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----------------DSFLVSRDQDEMQA 102 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-----------------~~v~~~~~~~~~~~ 102 (173)
+.++.+||.+|+| .|..+..+++. |++|++++.+++-++.+++..+. -.++..+-.+....
T Consensus 20 ~~~~~~vLD~GCG-~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCG-KSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTC-CSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCC-CcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 3688999999987 46666677765 88999999999998888875432 11211111111000
Q ss_pred hcCCccEEEEcCCCc--------cchHHHHHhhhcCCEEE
Q 030694 103 AMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLV 134 (173)
Q Consensus 103 ~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v 134 (173)
..+.+|+|++...-. ..+..+.+.|+|||+++
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 014799999743221 13456789999999933
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00011 Score=54.33 Aligned_cols=85 Identities=14% Similarity=0.100 Sum_probs=60.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
+|.|+|+|.+|...+..+.. |.+|+++++++++.+.+.+ .|... .+ . .+...+.|++|.|++.+..+...+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~-~g~~~-~~--~----~~~~~~~D~vi~~v~~~~~~~~v~ 73 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQE-EFGSE-AV--P----LERVAEARVIFTCLPTTREVYEVA 73 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHH-HHCCE-EC--C----GGGGGGCSEEEECCSSHHHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHH-CCCcc-cC--H----HHHHhCCCEEEEeCCChHHHHHHH
Confidence 58899999999998888877 9999999999998888877 45432 22 1 122347899999999874345444
Q ss_pred ----HhhhcCCEEEEeCC
Q 030694 125 ----GLLKSQGKLVLLGA 138 (173)
Q Consensus 125 ----~~l~~~G~~v~~g~ 138 (173)
..++++..++.++.
T Consensus 74 ~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 74 EALYPYLREGTYWVDATS 91 (289)
T ss_dssp HHHTTTCCTTEEEEECSC
T ss_pred HHHHhhCCCCCEEEECCC
Confidence 34455556666654
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00013 Score=53.36 Aligned_cols=94 Identities=20% Similarity=0.142 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---------------------C-EEeeCCChH
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---------------------D-SFLVSRDQD 98 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---------------------~-~v~~~~~~~ 98 (173)
.++.+||.+|+| .|..+..+++ .|++|++++.++.-.+.+++..+. . .++..+-.+
T Consensus 67 ~~~~~vLD~GCG-~G~~~~~La~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCG-KAIEMKWFAD-RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCT-TCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCC-CcHHHHHHHH-CCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 578899999987 3666666666 599999999999988888764431 1 111111111
Q ss_pred HHHHhcCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEEe
Q 030694 99 EMQAAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~ 136 (173)
......+.||+|++...-. ..+..+.+.|+|||+++++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 1101125799999754321 1355677899999998643
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00021 Score=54.20 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC----------------CCEEeeCCChHHH
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG----------------ADSFLVSRDQDEM 100 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g----------------~~~v~~~~~~~~~ 100 (173)
.+.++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++.+. .-.++..+..+..
T Consensus 102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 348899999999975 777777887765 689999999998888877421 1122222222211
Q ss_pred HHh-cCCccEEEEcCCCcc-chHHHHHhhhcCCEEEEeCC
Q 030694 101 QAA-MGTMDGIIDTVSAVH-PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 101 ~~~-~~~~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~ 138 (173)
..+ .+.+|+|+-....+. .+..+.+.|+|||+++.+..
T Consensus 181 ~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 111 236999997666553 47788999999999987653
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0002 Score=51.39 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhc-----CCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAM-----GTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~-----~~~ 107 (173)
.++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+.+.++. +.+
T Consensus 71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 457899999987 677888888876 469999999999888887643 421 233333233333332 579
Q ss_pred cEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
|++|-..... ..+..+++.|+|||.++.-.
T Consensus 150 D~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9998544322 23678889999999998764
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00029 Score=50.02 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhc-----CCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAM-----GTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~-----~~~ 107 (173)
.++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |. -.++..+..+...... +.+
T Consensus 63 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 63 MQAKKVIDIGTF-TGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hCCCEEEEeCCc-chHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 467899999987 477777788765 569999999999888887743 42 2233333334444443 689
Q ss_pred cEEEEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|+|+-..... ..+..+.+.|+|||.++....
T Consensus 142 D~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9999544432 235678899999999987653
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=50.20 Aligned_cols=98 Identities=13% Similarity=0.011 Sum_probs=66.6
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-C-EEeeCCChHHHHHhcCCccEEEEc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D-SFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~-~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
....+.++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++ .+. . .++..+..+. ...+.+|+|+..
T Consensus 40 ~l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~d~~~~--~~~~~~D~v~~~ 114 (218)
T 3ou2_A 40 RLRAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEAGR-HGLDNVEFRQQDLFDW--TPDRQWDAVFFA 114 (218)
T ss_dssp HHTTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHGG-GCCTTEEEEECCTTSC--CCSSCEEEEEEE
T ss_pred HHhcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHHh-cCCCCeEEEecccccC--CCCCceeEEEEe
Confidence 334457788999999873 6666667666 8899999999998888877 552 2 2222222221 123479999865
Q ss_pred CCC--------ccchHHHHHhhhcCCEEEEeCC
Q 030694 114 VSA--------VHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 114 ~g~--------~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
..- ...+..+.+.|+|||+++....
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 433 2245677899999999887753
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00017 Score=54.34 Aligned_cols=72 Identities=24% Similarity=0.349 Sum_probs=53.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+|||+|+ |.+|..+++.+...|++|+++++++.+.+.+.+ .+... ..|..+.+.+.+...++|++|.+.+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 48999998 999999999999999999999998776544432 24322 23455566666777789999999885
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00031 Score=49.82 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhc----CCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAM----GTMD 108 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~----~~~d 108 (173)
.++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |. -.++..+..+...... +.+|
T Consensus 57 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 57 QGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 567899999987 577777788776 579999999999888877643 42 1233333233333322 4699
Q ss_pred EEEEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 109 GIIDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 109 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+-..... ..+..+.+.|+|||.++.-..
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998554433 246677899999998887654
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00034 Score=52.90 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+...+++|+|+|.+|...++.++. .+. +|.+.+++.++.+.+.+.++.. .+. ..+ .++.. +.|+|+.|++.
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~---~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQP---AEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECC---HHHHT-SSSEEEECCCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECC---HHHHh-CCCEEEEeeCC
Confidence 567899999999999988776665 454 8999999999888887755421 122 222 23345 79999999997
Q ss_pred ccchHHHHHhhhcCCEEEEeCCCC
Q 030694 117 VHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...+-. ...+++|-.++.+|...
T Consensus 198 ~~pv~~-~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 198 RKPVVK-AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SSCCBC-GGGCCTTCEEEECSCCS
T ss_pred CCceec-HHHcCCCeEEEECCCCC
Confidence 532111 25678888888887654
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00014 Score=54.45 Aligned_cols=96 Identities=19% Similarity=0.152 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC---CEEeeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA---DSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~---~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
++++++||-+|+| .|..+..+++..|++|++++.+++..+.+++. .|. -.++..+..+ .....+.+|+|+..
T Consensus 115 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 115 AGPDDTLVDAGCG-RGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD-TPFDKGAVTASWNN 192 (312)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCTTCEEEEEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc-CCCCCCCEeEEEEC
Confidence 6789999999987 36677777777689999999999988887764 231 1222222111 10012479999864
Q ss_pred CC-----CccchHHHHHhhhcCCEEEEeC
Q 030694 114 VS-----AVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g-----~~~~~~~~~~~l~~~G~~v~~g 137 (173)
-. ....+..+.+.|+|||+++...
T Consensus 193 ~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 32 2235778889999999998775
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.60 E-value=4e-05 Score=53.31 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=62.1
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC----------CeEEEEeCCcchHHHHHHHcCCCEEe-eCC--ChHHHH
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG----------VKVTVISTSPSKKSEAVERLGADSFL-VSR--DQDEMQ 101 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g----------~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~--~~~~~~ 101 (173)
.....++++++||.+|+|+ |..+..+++..| .+|++++.++.+. ......+ ..+ ..+...
T Consensus 15 ~~~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 15 ERHQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------LEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp HHHCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------CTTCEEECSCCTTSHHHHH
T ss_pred HhcCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc------CCCCeEEEeccCCCHHHHH
Confidence 3445568899999999986 888888888876 6899999887531 1111222 111 122111
Q ss_pred ---H-hc-CCccEEEEc-----CCCc------------cchHHHHHhhhcCCEEEEeC
Q 030694 102 ---A-AM-GTMDGIIDT-----VSAV------------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 102 ---~-~~-~~~d~vid~-----~g~~------------~~~~~~~~~l~~~G~~v~~g 137 (173)
+ .. +.+|+|+.. ++.. ..+..+.+.|+|||+++...
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1 12 379999953 3321 24567889999999998764
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0003 Score=50.38 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC--C-EEeeCCChH--HHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA--D-SFLVSRDQD--EMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~--~~~~~~~~~d~vid 112 (173)
.++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++.... . ..+..+..+ ......+.+|+++.
T Consensus 71 ~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 71 PIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp CCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred CCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE
Confidence 347899999999974 777788888776 5999999999888887764321 1 122111111 00111247999997
Q ss_pred cCCCc---c-chHHHHHhhhcCCEEEEe
Q 030694 113 TVSAV---H-PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 ~~g~~---~-~~~~~~~~l~~~G~~v~~ 136 (173)
.+..+ . .+..+.+.|+|||+++..
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 66654 2 367788899999998885
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00036 Score=50.69 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH----HcCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE----RLGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |++|..+++.+...|++|++++++.++.....+ ..+... ..|-.+.+.+++. .++
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4688999998 999999999999999999999997655433222 234322 2344444433322 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 93 id~li~~Ag~ 102 (265)
T 1h5q_A 93 ISGLIANAGV 102 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00017 Score=53.62 Aligned_cols=94 Identities=10% Similarity=0.016 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---E---EeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---S---FLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~---v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
-.+++++|+|+|++|..++..+...| +|+++.++.++.+.+.+.++.. . .++..+ . .+..+++|++++++
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~-~~~~~~~DilVn~a 201 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L-DVDLDGVDIIINAT 201 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T-TCCCTTCCEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H-HHhhCCCCEEEECC
Confidence 46889999999999999999999999 9999999988877665544320 0 011111 1 22345899999999
Q ss_pred CCccch-----HH-HHHhhhcCCEEEEeCC
Q 030694 115 SAVHPL-----MP-LIGLLKSQGKLVLLGA 138 (173)
Q Consensus 115 g~~~~~-----~~-~~~~l~~~G~~v~~g~ 138 (173)
|..... .- ....++++..++.+..
T Consensus 202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231 (287)
T ss_dssp CTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence 965310 01 1345677777887764
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.60 E-value=2.9e-05 Score=56.89 Aligned_cols=88 Identities=18% Similarity=0.179 Sum_probs=61.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
++ +++|+|+|++|.+++..+...|+ +|+++.|+.+|.+.+.+.++. ... +...+...++|++|+|++..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~---~~~~~~~~~aDiVInatp~gm~p 180 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL---DQLDEVVKKAKSLFNTTSVGMKG 180 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG---GGHHHHHHTCSEEEECSSTTTTS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH---HHHHhhhcCCCEEEECCCCCCCC
Confidence 46 89999999999999999999999 999999998876665443331 222 22233445799999998642
Q ss_pred --cchHHHHHhhhcCCEEEEeCC
Q 030694 118 --HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 --~~~~~~~~~l~~~G~~v~~g~ 138 (173)
..+. ...++++..++.+-.
T Consensus 181 ~~~~i~--~~~l~~~~~V~Divy 201 (253)
T 3u62_A 181 EELPVS--DDSLKNLSLVYDVIY 201 (253)
T ss_dssp CCCSCC--HHHHTTCSEEEECSS
T ss_pred CCCCCC--HHHhCcCCEEEEeeC
Confidence 1121 345677777777653
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=97.60 E-value=8.6e-05 Score=52.06 Aligned_cols=126 Identities=18% Similarity=0.207 Sum_probs=73.1
Q ss_pred ccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHH
Q 030694 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 4 ~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (173)
+....+.+++++++.... .+.. ......+... ++++++||-+|+|. |..+..+++ .+. +|++++.+++..+.+
T Consensus 26 ~~~~~~~~~~~~~f~~~~-~~~~-~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a 99 (205)
T 3grz_A 26 KDQEIIRLDPGLAFGTGN-HQTT-QLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDISDESMTAA 99 (205)
T ss_dssp TTCEEEEESCC-----CC-HHHH-HHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEESCHHHHHHH
T ss_pred CCceeEEecCCcccCCCC-CccH-HHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEECCHHHHHHH
Confidence 345556666666555432 1111 1112222222 36789999999874 666666665 455 999999999988887
Q ss_pred HHHc---CC--CEEeeCCChHHHHHhcCCccEEEEcCCCcc---chHHHHHhhhcCCEEEEeCC
Q 030694 83 VERL---GA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 83 ~~~~---g~--~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~ 138 (173)
++.+ +. -.++..+..+ ...+.+|+++....... .+..+.+.|+++|+++..+.
T Consensus 100 ~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 100 EENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp HHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred HHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 7742 32 2233322222 22358999997655431 24566678999999988643
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00044 Score=51.21 Aligned_cols=95 Identities=24% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHH--HHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKS--EAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~--~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.++|+|+|+ |.+|..+++.+...| .+|+++++++++.. .+.. .+... ..|..+.+.+.+...++|.+|.+.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 83 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALNGAYATFIVTNYW 83 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEEECCCHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCC
Confidence 478999998 999999999888888 89999999877642 2333 35432 235556666767777999999998742
Q ss_pred c---------chHHHHHhhhc-C-CEEEEeCC
Q 030694 118 H---------PLMPLIGLLKS-Q-GKLVLLGA 138 (173)
Q Consensus 118 ~---------~~~~~~~~l~~-~-G~~v~~g~ 138 (173)
. ....+++.++. + ++++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 1 12234444433 2 57777554
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0003 Score=48.31 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=64.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C-EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v~~~~~~~~~~~~~~~~d~vid 112 (173)
...++++||.+|+|. |..+..+++.. .+|++++.+++..+.+++.+ +. . .++..+..+.... .+.+|+++.
T Consensus 30 ~~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~ 106 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVV 106 (192)
T ss_dssp CCCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEE
T ss_pred CCCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEE
Confidence 347899999999875 77777777655 89999999998888887642 32 1 2222221221111 147999997
Q ss_pred cCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..... ..+..+.+.|+++|+++...
T Consensus 107 ~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 107 GGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp SCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 65422 34567778899999988765
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00096 Score=48.96 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=64.7
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHH--HHHhcCCccEEEEc
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDE--MQAAMGTMDGIIDT 113 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~--~~~~~~~~d~vid~ 113 (173)
...++++.+||-+|+| .|..+..+++ .|++|++++.+++-++.+++...... ..+..+.+. .....+.+|+|+.+
T Consensus 40 ~l~l~~g~~VLDlGcG-tG~~a~~La~-~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 40 LENIVPGSTVAVIGAS-TRFLIEKALE-RGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp TTTCCTTCEEEEECTT-CHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred hcCCCCcCEEEEEeCc-chHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEh
Confidence 3445889999999997 5777777776 58899999999999999988654321 111111111 11234589999876
Q ss_pred CCCc--------cchHHHHHhhhcCCEEEEe
Q 030694 114 VSAV--------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 114 ~g~~--------~~~~~~~~~l~~~G~~v~~ 136 (173)
..-. ..+..+.+.+ |||+++..
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred hhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 4321 1355666788 99998755
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00031 Score=51.43 Aligned_cols=88 Identities=16% Similarity=0.160 Sum_probs=63.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
.+|.|+|+|.+|...++.+...|.+ |.++++++++.+.+.+.+|... . .+. .+.....|++|.|+.... ...
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~--~~~---~~~~~~~Dvvi~av~~~~-~~~ 83 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-T--TDL---AEVNPYAKLYIVSLKDSA-FAE 83 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-E--SCG---GGSCSCCSEEEECCCHHH-HHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-e--CCH---HHHhcCCCEEEEecCHHH-HHH
Confidence 5799999999999998888888997 8999999998888877567532 1 111 123457999999999873 455
Q ss_pred HHHhhh----cCCEEEEeCC
Q 030694 123 LIGLLK----SQGKLVLLGA 138 (173)
Q Consensus 123 ~~~~l~----~~G~~v~~g~ 138 (173)
.+..+. ++..++.++.
T Consensus 84 v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 84 LLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp HHHHHHTTCCTTCEEEECCT
T ss_pred HHHHHHhhcCCCcEEEECCC
Confidence 554443 5555666543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=54.39 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH-HHHHHcCCCE--EeeCCChHHHHHhcCC--ccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAVERLGADS--FLVSRDQDEMQAAMGT--MDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~~~~~--~d~vid~~g 115 (173)
.+.+|||+|+ |.+|..+++.+...|++|++++++..+.. .+.+ +.... ..|-.+.+.+.+...+ +|++|.+.+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD-HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh-cCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 4678999998 99999999999999999999998754321 1111 11111 2344455555555444 999999998
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 99 ~~ 100 (333)
T 2q1w_A 99 SY 100 (333)
T ss_dssp CC
T ss_pred ec
Confidence 54
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0011 Score=52.76 Aligned_cols=95 Identities=20% Similarity=0.246 Sum_probs=64.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|+|.+|...+..+...|.+|.+.++++++.+.+.+..+...+....+....-+-.++.|+||-|+.....+...
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 46999999999999999888899999999999999888877442111222223222211123589999999985334544
Q ss_pred HH----hhhcCCEEEEeCC
Q 030694 124 IG----LLKSQGKLVLLGA 138 (173)
Q Consensus 124 ~~----~l~~~G~~v~~g~ 138 (173)
+. .++++..++.++.
T Consensus 86 l~~l~~~l~~g~iiId~s~ 104 (474)
T 2iz1_A 86 IKSLLPLLDIGDILIDGGN 104 (474)
T ss_dssp HHHHGGGCCTTCEEEECSC
T ss_pred HHHHHhhCCCCCEEEECCC
Confidence 43 4556666666654
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00085 Score=53.47 Aligned_cols=94 Identities=23% Similarity=0.230 Sum_probs=63.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+..|. ..+....+.+..-+-..+.|+||-|+.....+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v 82 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence 58899999999999998888999999999999998888774451 11222223222211123689999999985334
Q ss_pred HHHH----HhhhcCCEEEEeCC
Q 030694 121 MPLI----GLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~----~~l~~~G~~v~~g~ 138 (173)
...+ ..++++..++..+.
T Consensus 83 ~~vl~~l~~~l~~g~iIId~sn 104 (478)
T 1pgj_A 83 DSTIEQLKKVFEKGDILVDTGN 104 (478)
T ss_dssp HHHHHHHHHHCCTTCEEEECCC
T ss_pred HHHHHHHHhhCCCCCEEEECCC
Confidence 4444 44556666666653
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00025 Score=52.77 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=62.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+ .|.. + ..+.. +.....|++|.|++.+..+...
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~-~--~~~~~---~~~~~~D~vi~~vp~~~~~~~v 77 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-QGAQ-A--CENNQ---KVAAASDIIFTSLPNAGIVETV 77 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-TTCE-E--CSSHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-CCCe-e--cCCHH---HHHhCCCEEEEECCCHHHHHHH
Confidence 57999999999999988888889999999999888887766 4532 1 22221 2223589999999876444444
Q ss_pred H-------HhhhcCCEEEEeCC
Q 030694 124 I-------GLLKSQGKLVLLGA 138 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~ 138 (173)
+ ..++++..++.++.
T Consensus 78 ~~~~~~l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 78 MNGPGGVLSACKAGTVIVDMSS 99 (301)
T ss_dssp HHSTTCHHHHSCTTCEEEECCC
T ss_pred HcCcchHhhcCCCCCEEEECCC
Confidence 4 35666777776653
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0003 Score=52.91 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=61.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC--cchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+|.|+|.|.+|...++.+...|. +|++++++ +++.+.+.+ .|.... .+.. +.....|++|-|++....
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~-~g~~~~---~~~~---e~~~~aDvVi~~vp~~~~ 96 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE-LGVSCK---ASVA---EVAGECDVIFSLVTAQAA 96 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH-TTCEEC---SCHH---HHHHHCSEEEECSCTTTH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH-CCCEEe---CCHH---HHHhcCCEEEEecCchhH
Confidence 4689999999999999999888999 99999997 467777776 675321 1211 222358999999988743
Q ss_pred h---HHHHHhhhcCCEEEEeCCC
Q 030694 120 L---MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 120 ~---~~~~~~l~~~G~~v~~g~~ 139 (173)
. ......++++..++.++..
T Consensus 97 ~~~~~~l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 97 LEVAQQAGPHLCEGALYADFTSC 119 (312)
T ss_dssp HHHHHHHGGGCCTTCEEEECCCC
T ss_pred HHHHHhhHhhcCCCCEEEEcCCC
Confidence 2 2333445566666666543
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=54.68 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=61.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch---
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL--- 120 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~--- 120 (173)
++|-++|.|.+|...++-+...|++|+++++++++.+.+.+ .|+... + ...+...+.|++|-|++.+...
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-~G~~~~-~-----s~~e~~~~~dvvi~~l~~~~~~~~v 78 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK-LGATVV-E-----NAIDAITPGGIVFSVLADDAAVEEL 78 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTT-TTCEEC-S-----SGGGGCCTTCEEEECCSSHHHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCeEe-C-----CHHHHHhcCCceeeeccchhhHHHH
Confidence 57999999999999999888999999999999998888777 675422 1 1123445788999888876432
Q ss_pred --HHHHHhhhcCCEEEEeCCCC
Q 030694 121 --MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 121 --~~~~~~l~~~G~~v~~g~~~ 140 (173)
...+..+++++.++.++...
T Consensus 79 ~~~~~~~~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 79 FSMELVEKLGKDGVHVSMSTIS 100 (297)
T ss_dssp SCHHHHHHHCTTCEEEECSCCC
T ss_pred HHHHHHhhcCCCeEEEECCCCC
Confidence 24566777888888877544
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.55 E-value=7.2e-05 Score=54.09 Aligned_cols=95 Identities=19% Similarity=0.156 Sum_probs=61.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~-~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~ 113 (173)
.+++++|.|+ |++|...++.+.. .|++|+..+++++ +.+. . .....|-.+.+.+++.. +++|+++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~----~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n 77 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN----L-KFIKADLTKQQDITNVLDIIKNVSFDGIFLN 77 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTT----E-EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccccc----c-eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence 4678999998 9999999987777 7889999988765 2211 1 01123444444333322 379999999
Q ss_pred CCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 114 VSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 114 ~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.|... ..+.+++.++++|+++.+++..+
T Consensus 78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~ 130 (244)
T 4e4y_A 78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC 130 (244)
T ss_dssp CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence 99631 12223345556789999876543
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00058 Score=49.76 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=60.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|.|+|+|.+|...+..+...| .+|+++++++++.+.+.+.+|... .. +. .+.. ..|++|-|+. +......
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~-~~-~~----~~~~-~~D~vi~~v~-~~~~~~v 73 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SA-TL----PELH-SDDVLILAVK-PQDMEAA 73 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ES-SC----CCCC-TTSEEEECSC-HHHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEE-eC-CH----HHHh-cCCEEEEEeC-chhHHHH
Confidence 6889999999999988888889 899999999999888877567532 21 11 1123 6899999998 4456666
Q ss_pred HHhhhc-CCEEEEe
Q 030694 124 IGLLKS-QGKLVLL 136 (173)
Q Consensus 124 ~~~l~~-~G~~v~~ 136 (173)
+..+.+ +..++.+
T Consensus 74 ~~~l~~~~~ivv~~ 87 (263)
T 1yqg_A 74 CKNIRTNGALVLSV 87 (263)
T ss_dssp HTTCCCTTCEEEEC
T ss_pred HHHhccCCCEEEEe
Confidence 665643 3345444
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00049 Score=50.98 Aligned_cols=78 Identities=19% Similarity=0.150 Sum_probs=58.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC---eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~---~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.+|.|+|+|.+|...++.+...|. +|+++++++++.+.+.+.+|.... + + ..+...+.|++|-|+... .+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-~--~---~~~~~~~aDvVilav~p~-~~ 76 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-Q--D---NRQGALNADVVVLAVKPH-QI 76 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-S--C---HHHHHSSCSEEEECSCGG-GH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-C--C---hHHHHhcCCeEEEEeCHH-HH
Confidence 579999999999999999888888 899999999999988885675321 1 1 122345789999999654 45
Q ss_pred HHHHHhhh
Q 030694 121 MPLIGLLK 128 (173)
Q Consensus 121 ~~~~~~l~ 128 (173)
...+..++
T Consensus 77 ~~vl~~l~ 84 (280)
T 3tri_A 77 KMVCEELK 84 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00029 Score=53.07 Aligned_cols=76 Identities=20% Similarity=0.231 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-EE--eeCCChHHHHHhcC--CccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF--LVSRDQDEMQAAMG--TMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~~--~~d~vi 111 (173)
.+.+|||.|+ |.+|..+++.+...|++|++++++.++.....+.+ +.. .. .|-.+.+.+.+... ++|++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 4678999998 99999999999999999999998766543332212 321 22 24445555555544 899999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
.+.+..
T Consensus 84 h~A~~~ 89 (341)
T 3enk_A 84 HFAALK 89 (341)
T ss_dssp ECCCCC
T ss_pred ECcccc
Confidence 999864
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00038 Score=50.20 Aligned_cols=96 Identities=17% Similarity=0.093 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh------cCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~------~~~ 106 (173)
.++++||-+|+| .|..+..+++.. +.+|+.++.+++..+.+++.+ |.. .++..+..+.+... .+.
T Consensus 69 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 69 VNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 457899999986 466677777775 569999999999888887643 421 23333333444444 357
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
+|++|-..... ..++.+.+.|+|||.++.-.
T Consensus 148 fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99998554332 23667889999999988754
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00026 Score=52.59 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=60.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
+|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+ .|.. + ..+.. +.....|++|-|++.+......+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~-~--~~~~~---~~~~~~Dvvi~~vp~~~~~~~v~ 74 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-AGEQ-V--VSSPA---DVAEKADRIITMLPTSINAIEAY 74 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-TTCE-E--CSSHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCe-e--cCCHH---HHHhcCCEEEEeCCCHHHHHHHH
Confidence 5889999999999998888899999999999988888776 5532 1 11221 22235899999997764455555
Q ss_pred Hh-------hhcCCEEEEeC
Q 030694 125 GL-------LKSQGKLVLLG 137 (173)
Q Consensus 125 ~~-------l~~~G~~v~~g 137 (173)
.. ++++..++..+
T Consensus 75 ~~~~~~~~~l~~~~~vv~~s 94 (296)
T 2gf2_A 75 SGANGILKKVKKGSLLIDSS 94 (296)
T ss_dssp HSTTSGGGTCCTTCEEEECS
T ss_pred hCchhHHhcCCCCCEEEECC
Confidence 42 34555565543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0012 Score=54.13 Aligned_cols=98 Identities=18% Similarity=0.271 Sum_probs=64.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-ch-HHHHHHHcCCCEEeeCCCh-HH----HHHh---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SK-KSEAVERLGADSFLVSRDQ-DE----MQAA---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~-~~~~~~~~g~~~v~~~~~~-~~----~~~~---~~~~d~v 110 (173)
.+++++|.|+ +++|+..++.+...|++|++.++.. ++ .+.+++ .|...+....+. .. .++. .+++|++
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL 399 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL 399 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 8999999999999999999987532 22 233333 454444344443 21 2222 3589999
Q ss_pred EEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~ 140 (173)
+++.|... ..+.++..|+ .+|+++.+++..
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~a 456 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS 456 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence 99999530 2345666664 358999998643
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.52 E-value=8.5e-05 Score=56.10 Aligned_cols=87 Identities=21% Similarity=0.332 Sum_probs=58.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~---- 117 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++.++.+ +..... ....++++....|+++-+++..
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~---~~~~l~ell~~aDiV~l~~Plt~~t~ 208 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWP------GVESYV---GREELRAFLNQTRVLINLLPNTAQTV 208 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCT------TCEEEE---SHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhh------hhhhhc---ccCCHHHHHhhCCEEEEecCCchhhh
Confidence 588999999999999999999999999999998765431 111111 1123344445677777776632
Q ss_pred cch-HHHHHhhhcCCEEEEeC
Q 030694 118 HPL-MPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ~~~-~~~~~~l~~~G~~v~~g 137 (173)
..+ ...+..|+++..++.++
T Consensus 209 ~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 209 GIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp TCBSHHHHTTSCTTEEEEECS
T ss_pred hhccHHHHhhCCCCCEEEECC
Confidence 112 35556667776666665
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00013 Score=53.66 Aligned_cols=94 Identities=20% Similarity=0.247 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH---CCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHhcCCccEE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~---~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~d~v 110 (173)
+++|.+||-+|+| .|..+..+++. .|++|++++.+++-++.+++.+ +.. .++..+-.+ -..+.+|++
T Consensus 68 ~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~---~~~~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCS-LGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD---IAIENASMV 143 (261)
T ss_dssp CCTTCEEEEETCT-TTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT---CCCCSEEEE
T ss_pred CCCCCEEEEEeCC-CCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc---ccccccccc
Confidence 4889999999987 46666677765 3679999999999888887743 211 122221111 112468888
Q ss_pred EEcCCCc--------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
+....-. ..+..+.+.|+|||+++..-
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 7654321 24667889999999998764
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00031 Score=52.08 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc----C---------C--CEEeeCCChHHHHHhc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL----G---------A--DSFLVSRDQDEMQAAM 104 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~----g---------~--~~v~~~~~~~~~~~~~ 104 (173)
..+++||++|+|. |..+..+++. +. +|++++.+++-.+.+++.+ + . -.++..+..+.+.. .
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 4568999999863 5555666666 54 9999999999888888765 2 1 12333322344444 5
Q ss_pred CCccEEEEcCCC----------ccchHHHHHhhhcCCEEEEe
Q 030694 105 GTMDGIIDTVSA----------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 105 ~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+|+|+-.... ...+..+.+.|+|+|.++..
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 689999855442 22366888999999998876
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.52 E-value=9.8e-05 Score=55.95 Aligned_cols=88 Identities=19% Similarity=0.244 Sum_probs=61.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|..+++.++..|++|++.+++.++.+.+ ...... ..+.++....|+++-+++...
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~------~~~~~~---~~l~ell~~aDvV~l~lPlt~~t~ 206 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF------HETVAF---TATADALATANFIVNALPLTPTTH 206 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC------SEEEEG---GGCHHHHHHCSEEEECCCCCGGGT
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH------hhcccc---CCHHHHHhhCCEEEEcCCCchHHH
Confidence 58899999999999999999999999999999886543211 112111 122233446888888887431
Q ss_pred -c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 -P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -...+..|+++..++.++.
T Consensus 207 ~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 207 HLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp TCBSHHHHHTCCSCCEEEECSC
T ss_pred HhcCHHHHhcCCCCCEEEEcCC
Confidence 1 2366777888888888874
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00028 Score=49.81 Aligned_cols=93 Identities=26% Similarity=0.211 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCEEeeCCChHHHHHhcCCccEEEEcCCCcc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~- 118 (173)
.++.+||-+|+| .|..+..+++. ++++++++.+++..+.+++.+. .-.++..+..+.. ..+.+|+|+....-..
T Consensus 44 ~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 44 KSFGNVLEFGVG-TGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE--VPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp TCCSEEEEECCT-TSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC--CCSCCSEEEEESCGGGS
T ss_pred cCCCeEEEeCCC-CCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC--CCCCeEEEEECcchhcC
Confidence 578999999986 35566666664 8899999999998888888554 1222222211110 1158999986643321
Q ss_pred -------chHHHHHhhhcCCEEEEeC
Q 030694 119 -------PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 -------~~~~~~~~l~~~G~~v~~g 137 (173)
.+..+.+.|+|||+++...
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4668889999999988774
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0001 Score=56.94 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=70.5
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc-------chHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------SKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~-------~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
+.++...+.--+..+|+|+|+|..|..+++++...|+ +|++++++- +++...++.+....- .......+.+
T Consensus 176 l~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~-~~~~~~~L~e 254 (398)
T 2a9f_A 176 FNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN-REFKSGTLED 254 (398)
T ss_dssp HHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS-CTTCCCSCSH
T ss_pred HHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC-cccchhhHHH
Confidence 4445444443456799999999999999999999999 999999862 223333322221100 0001111222
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
...+.|++|.+.+..-..+..++.|+++..++.++++..
T Consensus 255 av~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 255 ALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIP 293 (398)
T ss_dssp HHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred HhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence 233689999998844345588899999999999987764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0016 Score=47.38 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchH-----HHHHHHcCCCEE---eeCCChHHHHH-------
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKK-----SEAVERLGADSF---LVSRDQDEMQA------- 102 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~-----~~~~~~~g~~~v---~~~~~~~~~~~------- 102 (173)
-.+++++|.|+ +++|..+++.+...|++|++++++.++. +.+.+..+.... .|-.+.+.+++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 35789999986 4999999999999999999998875543 223332353322 23344333222
Q ss_pred hcCCccEEEEcCCC
Q 030694 103 AMGTMDGIIDTVSA 116 (173)
Q Consensus 103 ~~~~~d~vid~~g~ 116 (173)
..+++|++|++.|.
T Consensus 98 ~~g~id~li~nAg~ 111 (267)
T 3gdg_A 98 DFGQIDAFIANAGA 111 (267)
T ss_dssp HTSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 23589999999985
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00028 Score=51.97 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc----CCC--EEeeCCChHHHHHh-cCCcc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL----GAD--SFLVSRDQDEMQAA-MGTMD 108 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~----g~~--~v~~~~~~~~~~~~-~~~~d 108 (173)
..++++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.+ .++..+..+ .. .+.+|
T Consensus 106 ~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD 181 (275)
T 1yb2_A 106 CGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYD 181 (275)
T ss_dssp CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEE
T ss_pred cCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCcc
Confidence 345889999999987 466677777763 569999999999888887753 422 222221111 11 23699
Q ss_pred EEEEcCCCc-cchHHHHHhhhcCCEEEEeCC
Q 030694 109 GIIDTVSAV-HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 109 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+.....+ ..+..+.+.|+|+|+++....
T Consensus 182 ~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 182 AVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred EEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999876654 457788999999999988763
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0013 Score=52.52 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=66.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
.+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .+.. .+.-..+....-+...+.|+++-+++....+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-NEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-TTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 46899999999999999999999999999999999988877 4321 12112222222222236899999999853333
Q ss_pred ----HHHHhhhcCCEEEEeCCCC
Q 030694 122 ----PLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 122 ----~~~~~l~~~G~~v~~g~~~ 140 (173)
.+...++++..++..+...
T Consensus 84 ~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 84 DFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCC
Confidence 4445566777777776544
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00076 Score=49.21 Aligned_cols=102 Identities=25% Similarity=0.260 Sum_probs=67.1
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCc
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
+.....++++.+||-+|+|. |..+..+++..+++|++++.+++..+.+++.. |. ..++..+..+ .....+.+
T Consensus 53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~f 130 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASF 130 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCE
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCc
Confidence 33444558899999999873 77777888878899999999998887777642 31 1222221111 00012479
Q ss_pred cEEEEcCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+..-.-. ..+..+.+.|+|||+++...
T Consensus 131 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 131 DAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9998543221 24667888999999988764
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00051 Score=48.98 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=64.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEE-EeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTV-ISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
-.+|.|+|+|.+|...++.+...|.+|++ .++++++.+.+.+.+|..... ...+ .....|++|-++... ...
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~--~~~~----~~~~aDvVilavp~~-~~~ 95 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA--VELK----DALQADVVILAVPYD-SIA 95 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE--CCHH----HHTTSSEEEEESCGG-GHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc--ChHH----HHhcCCEEEEeCChH-HHH
Confidence 35799999999999999988889999998 889999988877667865432 1222 135789999999865 466
Q ss_pred HHHHhhh--cCCEEEEeC
Q 030694 122 PLIGLLK--SQGKLVLLG 137 (173)
Q Consensus 122 ~~~~~l~--~~G~~v~~g 137 (173)
..+..++ ++..++.+.
T Consensus 96 ~v~~~l~~~~~~ivi~~~ 113 (220)
T 4huj_A 96 DIVTQVSDWGGQIVVDAS 113 (220)
T ss_dssp HHHTTCSCCTTCEEEECC
T ss_pred HHHHHhhccCCCEEEEcC
Confidence 6666554 333455544
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00036 Score=52.02 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=62.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC--------CChHHHHHhcC---CccEEEE
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS--------RDQDEMQAAMG---TMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~--------~~~~~~~~~~~---~~d~vid 112 (173)
.+|.|+|+|.+|...+..+...|.+|+++++++++.+.+++ .|.. +... ...+ ..+... ++|++|-
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK-NGLI-ADFNGEEVVANLPIFS-PEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HCEE-EEETTEEEEECCCEEC-GGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-CCEE-EEeCCCeeEecceeec-chhhcccCCCCCEEEE
Confidence 47999999999999999888899999999999998888877 4532 1110 0000 012223 7999999
Q ss_pred cCCCccchHHHHHhh----hcCCEEEEeC
Q 030694 113 TVSAVHPLMPLIGLL----KSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~~~~~~~~~~l----~~~G~~v~~g 137 (173)
|+... .....+..+ +++..++.+.
T Consensus 81 ~v~~~-~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 81 LTKAQ-QLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CSCHH-HHHHHHHHHGGGCCTTCEEEECC
T ss_pred Eeccc-cHHHHHHHHHHhcCCCCEEEEec
Confidence 99976 355555444 4455666664
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00036 Score=50.04 Aligned_cols=96 Identities=17% Similarity=0.164 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHH-HhcCCccEEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQ-AAMGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~-~~~~~~d~vid 112 (173)
.++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |. -.++..+..+... ...+.+|+|+-
T Consensus 70 ~~~~~vLDiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 70 NNVKNILEIGTA-IGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HTCCEEEEECCS-SSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred cCCCEEEEEeCc-hhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 467899999986 355666666643 669999999999888887743 32 2344433334444 44568999985
Q ss_pred cCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..... ..+..+.+.|+|||.++.-.
T Consensus 149 ~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 149 DAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 54433 23457778999999998854
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00075 Score=48.90 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch--------------HHHHHHHcCCCEEeeCCChHHHHHhcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--------------KSEAVERLGADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~--------------~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (173)
..+.+|.|+|+|.+|...++.+...|.+|+++++++++ .+.+.+.++....- ...+....
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~e~~~~ 90 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLA------AFADVAAG 90 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEE------EHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceecc------CHHHHHhc
Confidence 45789999999999999999999999999999999886 33333324433221 11222346
Q ss_pred ccEEEEcCCCccchHHHHHhh----hcCCEEEEeC
Q 030694 107 MDGIIDTVSAVHPLMPLIGLL----KSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~~~~~~~~~~l----~~~G~~v~~g 137 (173)
.|++|-|+.... ....+..+ .++..++.++
T Consensus 91 aDvVilavp~~~-~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 91 AELVVNATEGAS-SIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp CSEEEECSCGGG-HHHHHHHHCHHHHTTSEEEECC
T ss_pred CCEEEEccCcHH-HHHHHHHhhhhhcCCCEEEECC
Confidence 899999999874 33333222 2566777776
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00022 Score=54.25 Aligned_cols=88 Identities=24% Similarity=0.277 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|..+++.++..|++|++.+++.++. +.+ . . .+.+ +.++....|+++.+++...
T Consensus 143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~-~----~~~~---l~ell~~aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--DHP-D-F----DYVS---LEDLFKQSDVIDLHVPGIEQN 211 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--CCT-T-C----EECC---HHHHHHHCSEEEECCCCCGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--hHh-c-c----ccCC---HHHHHhcCCEEEEcCCCchhH
Confidence 357899999999999999999999999999999877543 111 1 1 1112 2234447899999988652
Q ss_pred --ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|++++.++.++..
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg 235 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARP 235 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCT
T ss_pred HHHhCHHHHhhCCCCcEEEECCCC
Confidence 12 4677889999999988754
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00058 Score=52.06 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++.|+|.|.+|...++.++..|++|++.+++.++. .+... . ..+.++....|+++-+++...
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~---~---~sl~ell~~aDvVil~vP~t~~t 236 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG------VDWIA---H---QSPVDLARDSDVLAVCVAASAAT 236 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT------SCCEE---C---SSHHHHHHTCSEEEECC------
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc------cCcee---c---CCHHHHHhcCCEEEEeCCCCHHH
Confidence 358899999999999999999999999999999887641 23221 1 123344557899999988431
Q ss_pred --ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 237 ~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSCC
T ss_pred HHHhhHHHHhcCCCCCEEEECCCC
Confidence 22 4667889999999988744
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00037 Score=49.64 Aligned_cols=96 Identities=21% Similarity=0.181 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHh-cCCccEEEEcC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAA-MGTMDGIIDTV 114 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~-~~~~d~vid~~ 114 (173)
++++++||-+|+|..|..+..+++..+.+|++++.+++..+.+++.. +. -.++..+.. ..... .+.+|+|+...
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-IIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-SSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-hhhhcccCceeEEEECC
Confidence 47899999999885677777777766789999999999888877643 32 223332211 11111 25799999552
Q ss_pred CC-------------------------ccchHHHHHhhhcCCEEEEe
Q 030694 115 SA-------------------------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 115 g~-------------------------~~~~~~~~~~l~~~G~~v~~ 136 (173)
+- ...+..+.+.|+|||+++.+
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 21 22466777889999998875
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00027 Score=53.26 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
..|+++.|+|.|.+|..+++.++..|++|++.+++.++.. +...+ ..+.....|+++-+++...
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------~~~~~---l~ell~~aDvV~l~~p~~~~t 207 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----------YPFLS---LEELLKEADVVSLHTPLTPET 207 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------SCBCC---HHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----------cccCC---HHHHHhhCCEEEEeCCCChHH
Confidence 4678999999999999999999999999999998776432 11111 2223345778877776541
Q ss_pred --ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..++.++.
T Consensus 208 ~~li~~~~l~~mk~ga~lin~sr 230 (311)
T 2cuk_A 208 HRLLNRERLFAMKRGAILLNTAR 230 (311)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSC
T ss_pred HhhcCHHHHhhCCCCcEEEECCC
Confidence 12 245667777777777764
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0019 Score=51.45 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=64.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
..+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+..+...+....+....-+-....|++|-++.....+..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 94 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDA 94 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHH
Confidence 35699999999999999999889999999999999988887743211122222222211111248999999998533454
Q ss_pred HHH----hhhcCCEEEEeCCC
Q 030694 123 LIG----LLKSQGKLVLLGAP 139 (173)
Q Consensus 123 ~~~----~l~~~G~~v~~g~~ 139 (173)
.+. .++++..++.++..
T Consensus 95 vl~~l~~~l~~g~iIId~s~g 115 (480)
T 2zyd_A 95 AIDSLKPYLDKGDIIIDGGNT 115 (480)
T ss_dssp HHHHHGGGCCTTCEEEECSCC
T ss_pred HHHHHHhhcCCCCEEEECCCC
Confidence 443 44556667766643
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0001 Score=54.02 Aligned_cols=71 Identities=20% Similarity=0.191 Sum_probs=54.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+++|+|.|+ |.+|..+++.+...|++|+++++++.+.. . .+.. ...|-.+.+.+.+...++|++|.+.|..
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~ 75 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---G-PNEECVQCDLADANAVNAMVAGCDGIVHLGGIS 75 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---C-TTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---C-CCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc
Confidence 468999998 99999999999999999999999876543 1 1211 1235556667777777999999998863
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00044 Score=50.29 Aligned_cols=75 Identities=16% Similarity=0.094 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH---CCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHHH----Hhc-
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQ----AAM- 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~---~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~----~~~- 104 (173)
.+++++|.|+ |++|...++.+.. .|++|+++++++++.+.+.+++ +... ..|-.+.+.++ ++.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4678999998 9999999998887 8999999999988777665543 3221 13444443322 221
Q ss_pred ----CCcc--EEEEcCCC
Q 030694 105 ----GTMD--GIIDTVSA 116 (173)
Q Consensus 105 ----~~~d--~vid~~g~ 116 (173)
+++| ++|++.|.
T Consensus 85 ~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred ccccccCCccEEEECCcc
Confidence 3678 99999884
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.001 Score=50.24 Aligned_cols=93 Identities=18% Similarity=0.067 Sum_probs=63.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCC-----CEEeeCCChHHHHHh-cCCccEEEEcCCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGA-----DSFLVSRDQDEMQAA-MGTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~-~~~~d~vid~~g~ 116 (173)
.+||++|+| .|..+..+++.. +.+|++++.+++-.+.+++.++. -.++..+..+++.+. .+.+|+||.....
T Consensus 91 ~rVLdIG~G-~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGG-ACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCG-GGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECC-cCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 399999986 356666777754 66999999999999999886652 123333334444443 2479999864322
Q ss_pred c----------cchHHHHHhhhcCCEEEEeC
Q 030694 117 V----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 117 ~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
. ..+..+.++|+++|.++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 23567889999999987654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00047 Score=51.17 Aligned_cols=92 Identities=17% Similarity=0.249 Sum_probs=61.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc------hHHHHHH--HcCCCEE-eeCCChHHHHHhcCCccEEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAVE--RLGADSF-LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~------~~~~~~~--~~g~~~v-~~~~~~~~~~~~~~~~d~vid 112 (173)
..+|+|+|+ |.+|..+++.+...|.+|++++|+.. +.+.++. ..|...+ .|..+.+.+.+...++|++|.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 467999998 99999999999999999999998743 3332322 1243322 355555666666668999999
Q ss_pred cCCCcc--chHHHHHhhhcC---CEEE
Q 030694 113 TVSAVH--PLMPLIGLLKSQ---GKLV 134 (173)
Q Consensus 113 ~~g~~~--~~~~~~~~l~~~---G~~v 134 (173)
+.+... ....+++.++.. .+++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 998642 223444555433 4666
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0006 Score=48.48 Aligned_cols=96 Identities=23% Similarity=0.217 Sum_probs=64.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC---CCEEeeCCChH--HHHHhcCCccEEEE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG---ADSFLVSRDQD--EMQAAMGTMDGIID 112 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~--~~~~~~~~~d~vid 112 (173)
++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++... .-.++..+..+ ......+.+|+++.
T Consensus 71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 57899999999874 777777777754 599999999876666655332 11222222211 11122347999997
Q ss_pred cCCCcc---c-hHHHHHhhhcCCEEEEe
Q 030694 113 TVSAVH---P-LMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 ~~g~~~---~-~~~~~~~l~~~G~~v~~ 136 (173)
....+. . +..+.+.|+|||+++..
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 766442 2 66788999999998876
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00095 Score=50.59 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc----hHHHHHHHc------CCCE-EeeCCChHHHHHhcCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAVERL------GADS-FLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~----~~~~~~~~~------g~~~-v~~~~~~~~~~~~~~~~d~ 109 (173)
.+.+|||+|+ |.+|..+++.+...|++|+++++++. +.+.+.+.+ +... ..|..+.+.+.+...++|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 3578999998 99999999999999999999998654 233333212 1111 2344455666666679999
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
+|.+.+..
T Consensus 106 vih~A~~~ 113 (352)
T 1sb8_A 106 VLHQAALG 113 (352)
T ss_dssp EEECCSCC
T ss_pred EEECCccc
Confidence 99999853
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00032 Score=52.44 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC--------C-CEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG--------A-DSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g--------~-~~v~~~~~~~~~~~~~~~~d~v 110 (173)
..+++||++|+| .|..+..+++..+ .+|++++.+++..+.+++.+. . -.++..+..+.+....+.+|+|
T Consensus 89 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGG-DGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECT-TCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCC-cCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 346899999986 3555566666544 599999999998888877541 1 1233322222222223479999
Q ss_pred EEcCCCc-----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV-----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~-----------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-....+ ..+..+.+.|+|+|.++...
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8533221 24568889999999998874
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00047 Score=51.99 Aligned_cols=96 Identities=21% Similarity=0.126 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~v 110 (173)
...++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++.+.. -.++..+..+.+....+.+|+|
T Consensus 107 ~~~~~VLdIG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGG-DGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCT-TSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 346899999986 3555666666543 5999999999988888886531 1222222233344334579999
Q ss_pred EEcCCC----------ccchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSA----------VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~----------~~~~~~~~~~l~~~G~~v~~g 137 (173)
+..... ...+..+.+.|+|+|.++...
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 855422 234668889999999998764
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00013 Score=52.81 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=68.8
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCC
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~ 106 (173)
.+.....++++.+||-+|+| .|..+..+++..+.+|++++.+++..+.+++.. |. -.++..+..+ .....+.
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 114 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCG-TGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN-LPFQNEE 114 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCT-TSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CSSCTTC
T ss_pred HHHHHhcCCCCCeEEEeCCC-CCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh-CCCCCCC
Confidence 34444456789999999997 477888888887779999999998888776642 31 1222222111 1111247
Q ss_pred ccEEEEcCCC-----ccchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSA-----VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g 137 (173)
+|+|+....- ...+..+.+.|+|||+++...
T Consensus 115 fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 115 LDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999754332 234678888999999988765
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00039 Score=50.29 Aligned_cols=97 Identities=16% Similarity=0.054 Sum_probs=65.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
....++.+||-+|+| .|..+..+++.. +.++++++.+++..+.+++....-.++..+..+.. ..+.+|+|+....-
T Consensus 29 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l 105 (259)
T 2p35_A 29 VPLERVLNGYDLGCG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK--PAQKADLLYANAVF 105 (259)
T ss_dssp CCCSCCSSEEEETCT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC--CSSCEEEEEEESCG
T ss_pred cCCCCCCEEEEecCc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC--ccCCcCEEEEeCch
Confidence 334788999999987 466666676665 67999999999988888874333333332222211 23479999876542
Q ss_pred c------cchHHHHHhhhcCCEEEEeC
Q 030694 117 V------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 117 ~------~~~~~~~~~l~~~G~~v~~g 137 (173)
. ..+..+.+.|+|||+++...
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 106 QWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 23556778999999988764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=54.68 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHhcC--CccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAAMG--TMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~--~~d~vid~~g~ 116 (173)
.+.+|||.|+ |.+|..+++.+...|++|++++++..+...+.+.+.... ..|-.+.+.+.+... ++|++|.+.|.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 98 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA 98 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 4679999998 999999999999999999999986543221111122111 234445555555555 89999999985
Q ss_pred c
Q 030694 117 V 117 (173)
Q Consensus 117 ~ 117 (173)
.
T Consensus 99 ~ 99 (330)
T 2pzm_A 99 Y 99 (330)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00036 Score=52.86 Aligned_cols=93 Identities=17% Similarity=0.224 Sum_probs=63.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----chHHHHHH--HcCCCE-EeeCCChHHHHHhcC--CccEEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAVE--RLGADS-FLVSRDQDEMQAAMG--TMDGIID 112 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~----~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~--~~d~vid 112 (173)
..+|+|+|+ |.+|..+++.+...|.+|++++|++ ++...+.. ..+... ..|..+.+.+.+... ++|+||.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 457999999 9999999999999999999999976 34443332 134332 235556666666666 9999999
Q ss_pred cCCCcc--chHHHHHhhhcCC---EEEE
Q 030694 113 TVSAVH--PLMPLIGLLKSQG---KLVL 135 (173)
Q Consensus 113 ~~g~~~--~~~~~~~~l~~~G---~~v~ 135 (173)
+.+... ....+++.++..| +++.
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 999642 2235555555544 5553
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00042 Score=52.82 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH--CCCeEEEEeCCcch-------------HHHHHHHcCCC-EEeeCCChHHHHHh-
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSK-------------KSEAVERLGAD-SFLVSRDQDEMQAA- 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~--~g~~v~~~~~~~~~-------------~~~~~~~~g~~-~v~~~~~~~~~~~~- 103 (173)
.+.+|||.|+ |.+|..+++.+.. .|++|++++++... ...... .+.. ...|-.+.+.+.+.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIG-FKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTT-CCSEEEECCTTCHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccc-cCceEEECCCCCHHHHHHhh
Confidence 5789999998 9999999999988 89999999986541 111111 1111 12344556666666
Q ss_pred cCCccEEEEcCCCc
Q 030694 104 MGTMDGIIDTVSAV 117 (173)
Q Consensus 104 ~~~~d~vid~~g~~ 117 (173)
..++|++|.+.+..
T Consensus 88 ~~~~D~vih~A~~~ 101 (362)
T 3sxp_A 88 KLHFDYLFHQAAVS 101 (362)
T ss_dssp TSCCSEEEECCCCC
T ss_pred ccCCCEEEECCccC
Confidence 66999999999853
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00062 Score=50.86 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=63.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHH--HcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVE--RLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
++|+|+|+ |.+|..+++.+...|.+|++++|+++ +.+.+.+ ..+... ..|..+.+.+.+...++|++|.+.+...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~ 91 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ 91 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence 47999998 99999999999999999999999875 4333322 135432 2355666667777779999999998542
Q ss_pred --chHHHHHhhhcC---CEEE
Q 030694 119 --PLMPLIGLLKSQ---GKLV 134 (173)
Q Consensus 119 --~~~~~~~~l~~~---G~~v 134 (173)
....+++.++.. .+++
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEE
T ss_pred hHHHHHHHHHHHhcCCCCEEE
Confidence 233455555433 3665
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00055 Score=50.69 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+.++.+||-+|+| .|..+..+++..|++|++++.++..++.+++.. |. -.++..+..+ .....+.+|+|+.
T Consensus 79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~ 156 (297)
T 2o57_A 79 VLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE-IPCEDNSYDFIWS 156 (297)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS-CSSCTTCEEEEEE
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc-CCCCCCCEeEEEe
Confidence 55889999999987 577777788777889999999998877776632 31 1222221111 1001237999986
Q ss_pred cCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
...-. ..+..+.+.|+|||+++...
T Consensus 157 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 157 QDAFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 54321 24678889999999988775
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00073 Score=47.59 Aligned_cols=88 Identities=18% Similarity=0.124 Sum_probs=59.2
Q ss_pred EEEEEc-CChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 45 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 45 ~vlI~G-~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+++|+| +|.+|...++.+...|.+|+++++++++.+.+.+.++ .+ + ... ...+...+.|++|.|++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~~~~D~Vi~~~~~~- 75 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS-I-TGM---KNEDAAEACDIAVLTIPWE- 75 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC-E-EEE---EHHHHHHHCSEEEECSCHH-
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC-C-Chh---hHHHHHhcCCEEEEeCChh-
Confidence 689999 6999999999888899999999999888777665444 22 1 111 1222234689999999965
Q ss_pred chHHHHHhhh---cCCEEEEeCC
Q 030694 119 PLMPLIGLLK---SQGKLVLLGA 138 (173)
Q Consensus 119 ~~~~~~~~l~---~~G~~v~~g~ 138 (173)
.....+..+. ++..++.+..
T Consensus 76 ~~~~~~~~l~~~~~~~~vi~~~~ 98 (212)
T 1jay_A 76 HAIDTARDLKNILREKIVVSPLV 98 (212)
T ss_dssp HHHHHHHHTHHHHTTSEEEECCC
T ss_pred hHHHHHHHHHHHcCCCEEEEcCC
Confidence 3444443332 4555665553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 173 | ||||
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 1e-16 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 8e-16 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 3e-14 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 5e-14 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 1e-13 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 2e-13 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 5e-13 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 2e-12 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 9e-12 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 6e-11 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 2e-10 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 2e-09 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 3e-09 | |
| d1rjwa2 | 168 | c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu | 7e-09 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 2e-07 | |
| d1jvba2 | 170 | c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo | 1e-06 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 2e-06 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 9e-06 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 1e-05 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 4e-05 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 5e-05 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 7e-05 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 9e-05 | |
| d1tt7a1 | 162 | b.35.1.2 (A:2-127,A:295-330) Hypothetical protein | 3e-04 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 4e-04 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 7e-04 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 0.002 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 0.002 | |
| d1pjca1 | 168 | c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phorm | 0.003 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 0.004 |
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 71.1 bits (173), Expect = 1e-16
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 12 PEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 71
P+ L A APLLCAGIT YSPLR + PG VGVVG+GGLGH+ +K A AMG V
Sbjct: 2 PQ-EQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVA 59
Query: 72 ISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 131
T+ K EA + LGAD + SR+ DEM A + + D I++TV+A H L LLK G
Sbjct: 60 F-TTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDG 118
Query: 132 KLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDSRD 172
+ L+GAP P + P L + + S G ++++
Sbjct: 119 TMTLVGAPATPHKSPEVFNLIMKRR-AIAGSMIGGIPETQE 158
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.9 bits (167), Expect = 8e-16
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75
P APLLC G+TVYSPL G PG VG+VGLGG+G + +KAM T + +
Sbjct: 2 PSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISR 59
Query: 76 PSKKSEAVERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMP--LIGLLKSQGK 132
S+K E ++GAD ++ + ++ + + T D I+ S++ + + +K G+
Sbjct: 60 SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGR 119
Query: 133 LVLLGAPEKPLELPAFPLLTGE 154
+V + PE+ L P
Sbjct: 120 IVSISIPEQHEMLSLKPYGLKA 141
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 64.6 bits (156), Expect = 3e-14
Identities = 32/158 (20%), Positives = 55/158 (34%), Gaps = 10/158 (6%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
A L+ + C + Y PG V GLG +G A+ K G +
Sbjct: 1 ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60
Query: 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVSAVHPLMPLI-GLL 127
+K + LGA L R+ D+ + G +D +D L + +
Sbjct: 61 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120
Query: 128 KSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWG 165
G ++GA + +P ++ G S + +G
Sbjct: 121 LGWGSCTVVGAKVDEMTIPTVDVILGR---SINGTFFG 155
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 64.1 bits (155), Expect = 5e-14
Identities = 36/144 (25%), Positives = 49/144 (34%), Gaps = 8/144 (5%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
APL++ + C T Y PG V GLGG+G A+ KA G +
Sbjct: 1 APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59
Query: 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPLMPLIGLL 127
+ K LGA L +D D+ + G + + L
Sbjct: 60 THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119
Query: 128 KSQGKLVLLGAPEKPLELPAFPLL 151
G V+LG LP PLL
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLL 143
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 63.4 bits (153), Expect = 1e-13
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75
P++ PL C T P G G +G A+ AK G + +
Sbjct: 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61
Query: 76 PSKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQG 131
+ E ++LGA + S+ QD + A G ++ +++ + L + L G
Sbjct: 62 VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121
Query: 132 KLVLLGAPEKP--LELPAFPLLTGE 154
K+ ++GAP+ + LL G
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGG 146
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 63.1 bits (152), Expect = 2e-13
Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 6/164 (3%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
+PL+ + C T Y G V GLGG+G + KA G +
Sbjct: 1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 75 SPSKKSEAVERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLK 128
K + +GA + +D + + + G +D + + + ++ + +
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 129 SQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDSRD 172
+ ++ + + + +W + +G
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDS 164
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 61.4 bits (148), Expect = 5e-13
Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
AP + + C T Y G KPG V GLGG+G + K+ G +
Sbjct: 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61
Query: 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPLIGLL 127
K E +GA + +D + + + + + L
Sbjct: 62 LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 128 KSQGKLVLLGAPEKPLELPAFPLL 151
+ G V++G P L P+L
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPML 145
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 60.0 bits (144), Expect = 2e-12
Identities = 39/165 (23%), Positives = 56/165 (33%), Gaps = 9/165 (5%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
APLD L C T + +PG V GLG +G AV + G K +
Sbjct: 1 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60
Query: 75 SPSKKSEAVERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGL-L 127
K E + GA F+ D E + G +D ++ V V + + L
Sbjct: 61 LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 128 KSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDSRD 172
K G VL+G + L +W S +G
Sbjct: 121 KGWGVSVLVGWTDLHDVATRPIQLIAGR--TWKGSMFGGFKGKDG 163
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 58.1 bits (139), Expect = 9e-12
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74
APLD L C T Y +PG V GLGG+G + K G +
Sbjct: 1 APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60
Query: 75 SPSKKSEAVERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLI 124
K + GA + +D + ++ G +D + + V + +
Sbjct: 61 INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAAL 116
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 56.1 bits (134), Expect = 6e-11
Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 10/149 (6%)
Query: 17 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76
LD A +C+G T Y Y G V + G G LG V A+++G + ++
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 77 SKKSEAVERLGADSFLVSRDQDEMQAAMGTM--------DGIIDTVSAVHPLMPLIGLLK 128
+ + E +GAD L R+ + M D I++ L+ LL+
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 129 SQGKLVLLG--APEKPLELPAFPLLTGEE 155
G + G P+ P+ + L +
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKN 151
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 54.3 bits (129), Expect = 2e-10
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75
AP+LCAG+TVY L+ +PG V + G+GGLGHVAV++A+AMG+ V I
Sbjct: 2 EFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDID 60
Query: 76 PSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPLIGLLKSQGK 132
+K E +LGA + +R +D ++A + G ++ T + IG+ + G
Sbjct: 61 DAKL-ELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGT 119
Query: 133 LVLLGAPEKPLELPAFPLLTGE 154
+ L+G P P F ++
Sbjct: 120 IALVGLPPGDFPTPIFDVVLKG 141
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 51.5 bits (122), Expect = 2e-09
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 11 IPEGAPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKV 69
I ++ APL AGIT Y ++ PG +V +VG+GGLGH+AV+ K M
Sbjct: 1 ISREKLVEM-APLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPAT 59
Query: 70 TVISTSPSKKSEAVERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHPLMPLIG 125
+ +K + ERLGAD + +R ++ +D V + +
Sbjct: 60 VIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPY 119
Query: 126 LLKSQGKLVLLGAPEKPLELPAFPLLTGE 154
LL G+L+++G + P +++ E
Sbjct: 120 LLGRMGRLIIVGYGGEL-RFPTIRVISSE 147
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 51.8 bits (123), Expect = 3e-09
Identities = 6/64 (9%), Positives = 14/64 (21%), Gaps = 5/64 (7%)
Query: 3 ADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 62
+ ++++P+ + LD G G +
Sbjct: 142 YADFNLLKLPDRDKAMEKINIAEVVGVQV-----ISLDDAPRGYGEFDAGVPKKFVIDPH 196
Query: 63 KAMG 66
K
Sbjct: 197 KTFS 200
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 50.5 bits (119), Expect = 7e-09
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75
+ AP+ CAG+T Y L+ G KPG V + G+GGLGHVAV++AKAMG+ V +
Sbjct: 2 SFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 60
Query: 76 PSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG--IIDTVSAVHPLMPLIGLLKSQGKL 133
K A E ++ + T + ++ G
Sbjct: 61 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 120
Query: 134 VLLGAPEKPLELPAFPLLTGE 154
VL+G P + + +P F +
Sbjct: 121 VLVGLPPEEMPIPIFDTVLNG 141
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 46.1 bits (108), Expect = 2e-07
Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 8/158 (5%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75
PL+ + T + + + G V V+G+G +G + + AK G + S
Sbjct: 2 PLENAVMITDMMTTGFHGAELADI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 76 PSKKSEAVERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQ 130
EA + GA L ++ M +D +I L + ++K
Sbjct: 61 RPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120
Query: 131 GKLVLLGAPEKP--LELPAFPLLTGEEEDSWWQSHWGV 166
G + + L +P G +
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG 158
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 44.0 bits (102), Expect = 1e-06
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIST 74
++A APL C+GIT Y +R L P + VVG GGLG +AV+ AKA+ +
Sbjct: 3 AVEA-APLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60
Query: 75 SPSKKSEAVERLGADSFLVSRDQDEMQA-----AMGTMDGIIDTVSAVHPLMPLIGLLKS 129
+ EA +R GAD + + QD + +D +ID ++ L L
Sbjct: 61 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120
Query: 130 QGKLVLLGAPEKPLELPAFPLLTGE 154
QGK V++G L A + E
Sbjct: 121 QGKYVMVGLFGADLHYHAPLITLSE 145
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 44.2 bits (103), Expect = 2e-06
Identities = 7/71 (9%), Positives = 18/71 (25%), Gaps = 25/71 (35%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
++ E+ V++ + P D + A+
Sbjct: 146 ALSRENNTVKVTKDFPFDQLVKFYAF-------------------------DEINQAAID 180
Query: 61 FAKAMGVKVTV 71
K + +K +
Sbjct: 181 SRKGITLKPII 191
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 41.8 bits (97), Expect = 9e-06
Identities = 8/46 (17%), Positives = 13/46 (28%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 46
V ++ V +I LD +V + K V
Sbjct: 151 TVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTV 196
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 41.4 bits (96), Expect = 1e-05
Identities = 7/49 (14%), Positives = 13/49 (26%), Gaps = 3/49 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 49
V + V +I +D + + L G + V
Sbjct: 149 TVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE---LMHSGKSIRTV 194
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 40.0 bits (92), Expect = 4e-05
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81
PL R G+ + G V V+G G +G V+V AKA V + ++ E
Sbjct: 11 PLSVG----VHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLE 64
Query: 82 AVERLGADSFLVSRDQDEMQAAMGTM---------DGIIDTVSAVHPLMPLIGLLKSQGK 132
+ GAD LV E ++++ + ID + I + ++ G
Sbjct: 65 VAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGT 124
Query: 133 LVLLGAPEKPLELPAFPLLTGE 154
L+L+G + + +P E
Sbjct: 125 LMLVGMGSQMVTVPLVNACARE 146
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 39.6 bits (91), Expect = 5e-05
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Query: 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKK 79
A G+TVY LR KP G +G +A ++AKA+G K+ + K
Sbjct: 7 AASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA 66
Query: 80 SEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGK 132
A++ GA + R++D ++ G ++ + L+ +G
Sbjct: 67 QSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGL 122
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (91), Expect = 7e-05
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGI-TVYSPLRFYGLDKPGMHVGV 48
+ EHFVV IPE ++ P+ AG+ + + + + +
Sbjct: 139 VRVHEHFVVPIPENIWVET-LPVGEAGVHEAFERMEKGDV-RYRFTLVG 185
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 39.1 bits (90), Expect = 9e-05
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 50
V E + R+ + LD ++ + L K G + +
Sbjct: 154 TVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 37.2 bits (85), Expect = 3e-04
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 3/60 (5%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 60
++V +P+ L I + PG ++ G V VK
Sbjct: 105 ASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL---EETPGALKDILQNRIQGRVIVK 161
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 37.2 bits (85), Expect = 4e-04
Identities = 5/56 (8%), Positives = 11/56 (19%), Gaps = 10/56 (17%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 56
V + V +I ++ + + G G
Sbjct: 150 TVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI 195
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 7e-04
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100
G V V G G +G V + AKAMG V++ + + + +GAD L +
Sbjct: 25 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQ 84
Query: 101 QAAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG 153
+ A + I+ A + I +S G LVL+G + +P
Sbjct: 85 EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 144
Query: 154 E 154
E
Sbjct: 145 E 145
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 35.3 bits (80), Expect = 0.002
Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 49
++AD ++V +P+ L + +R G V +
Sbjct: 129 VLADPNYVGILPKNVKATIHPGKLDDINQILDQMR--AGQIEGRIVLEM 175
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 35.0 bits (79), Expect = 0.002
Identities = 20/146 (13%), Positives = 41/146 (28%), Gaps = 15/146 (10%)
Query: 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSK 78
A + +T Y L Y PG + +G A + K + +
Sbjct: 7 ATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66
Query: 79 ---KSEAVERLGADSFLVSRDQDEMQ----------AAMGTMDGIIDTVSAVHPLMPLIG 125
+++ LGA + + + + G ++ V
Sbjct: 67 LDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARK 126
Query: 126 LLKSQGKLVLLGAPEKPLELPAFPLL 151
L + L G +P+ +P +
Sbjct: 127 LNNNGLMLTYGGMSFQPVTIPTSLYI 152
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Score = 34.1 bits (78), Expect = 0.003
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ 101
V ++G G +G A K A +G +V + + + S G+ L+ + E++
Sbjct: 31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIE 90
Query: 102 AAMGTMDGIIDTV 114
A+ D +I V
Sbjct: 91 TAVAEADLLIGAV 103
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 34.2 bits (77), Expect = 0.004
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Query: 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 50
A +VV+IP+ ++ PL L+ G V +
Sbjct: 124 CRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLKG---QINGRVVLTLE 169
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 173 | |||
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.96 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.96 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.96 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.96 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.96 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.95 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.95 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.95 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.95 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.95 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.95 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.94 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.94 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.94 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.94 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.94 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.93 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.93 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.93 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.93 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.92 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.92 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.91 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.91 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.89 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.89 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.65 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 99.13 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.99 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.87 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 98.7 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.69 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.68 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.68 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.66 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.64 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.63 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.62 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.6 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.58 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.57 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 98.56 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.55 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 98.53 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.51 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.49 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.49 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.49 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.48 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.48 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.47 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.46 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.45 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 98.44 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.44 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 98.43 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.43 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 98.41 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.41 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.41 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.4 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.39 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.37 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.36 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.35 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 98.35 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.34 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.34 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.32 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.3 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.3 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 98.29 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.27 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.26 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.23 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.22 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 98.22 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.2 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.19 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 98.18 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.17 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.16 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.16 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.16 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.15 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.14 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 98.14 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.14 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.13 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.13 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 98.13 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.11 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.11 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 98.11 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 98.11 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 98.1 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.09 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.07 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.07 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.07 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.06 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.06 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 98.05 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.05 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.05 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.04 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.02 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.02 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 98.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.98 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.95 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.93 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 97.9 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.88 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.87 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.86 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 97.82 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 97.82 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.8 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 97.79 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.78 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.78 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.78 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.78 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 97.77 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.76 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.73 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.67 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.67 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.67 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 97.66 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.64 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.63 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 97.63 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.61 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.61 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 97.61 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 97.6 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 97.59 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.58 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.57 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 97.57 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.56 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 97.55 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 97.54 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 97.52 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 97.52 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.49 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.47 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.44 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.44 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 97.41 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.4 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.35 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.35 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 97.34 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.33 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 97.31 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 97.28 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 97.28 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 97.27 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.26 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.25 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 97.24 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.22 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 97.22 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.22 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 97.22 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 97.19 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.13 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 97.13 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.12 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 97.1 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.09 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 97.08 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.08 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 97.08 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.05 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 97.04 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 97.04 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.01 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 97.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 96.99 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.99 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 96.99 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.99 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 96.98 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 96.97 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.95 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 96.93 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.93 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 96.92 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.9 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 96.89 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 96.89 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 96.87 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 96.87 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.84 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 96.84 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 96.84 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.84 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.81 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 96.8 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 96.8 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.79 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.79 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 96.79 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.78 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.78 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 96.77 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.77 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.77 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 96.75 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.72 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 96.71 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.71 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 96.71 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 96.7 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 96.7 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 96.69 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.68 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 96.66 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 96.66 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.63 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.62 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.59 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 96.58 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 96.55 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.55 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 96.54 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 96.53 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 96.53 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.52 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 96.52 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.51 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 96.51 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.51 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.5 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 96.5 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 96.5 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.48 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 96.48 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 96.48 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 96.48 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.47 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 96.45 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 96.45 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 96.44 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 96.43 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 96.42 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.41 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.4 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.39 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.39 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.39 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 96.39 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 96.37 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.37 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 96.35 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.35 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.31 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 96.31 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 96.29 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 96.29 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 96.27 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 96.27 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.25 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 96.23 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.21 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.2 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 96.2 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 96.19 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 96.19 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 96.18 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 96.18 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 96.15 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 96.15 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 96.14 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 96.13 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 96.13 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.12 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 96.11 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 96.11 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 96.11 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 96.1 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.09 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.08 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.08 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 96.07 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.06 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 96.06 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 96.03 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 95.99 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.98 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 95.97 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 95.97 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 95.96 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.96 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 95.95 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 95.93 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.9 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 95.9 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.89 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.88 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.87 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.87 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 95.85 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 95.84 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.81 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.81 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.77 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.75 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.73 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.72 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 95.72 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.71 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 95.7 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 95.7 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.7 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.68 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.68 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 95.58 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.58 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 95.55 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 95.54 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.53 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 95.49 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.48 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 95.44 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.43 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 95.33 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.31 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 95.23 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 95.21 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.2 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.2 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 95.16 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 95.16 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 95.15 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 95.15 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 95.07 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.05 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 95.03 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 95.0 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 94.98 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 94.91 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 94.86 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 94.82 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 94.82 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 94.79 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 94.75 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 94.73 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 94.68 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 94.66 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.65 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 94.64 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.61 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.6 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.49 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.37 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.33 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 94.3 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 94.24 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 94.19 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 94.18 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 94.18 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 94.17 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 94.14 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 94.12 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 94.09 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.08 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.06 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 94.02 | |
| d2cula1 | 230 | GidA-related protein TTHA1897 {Thermus thermophilu | 93.91 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 93.8 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.72 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 93.67 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 93.59 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 93.58 | |
| d1v71a1 | 318 | Hypothetical protein C320.14 (SPCC320.14, SPCC330. | 93.54 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 93.49 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.4 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.25 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 93.21 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 92.99 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 92.92 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.83 | |
| d1neka2 | 330 | Succinate dehydogenase {Escherichia coli [TaxId: 5 | 92.76 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 92.75 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 92.74 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 92.63 | |
| d2gjca1 | 311 | Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( | 92.6 | |
| d1o58a_ | 293 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 92.59 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 92.57 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.52 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 92.33 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.09 | |
| d1p5ja_ | 319 | L-serine dehydratase {Human (Homo sapiens) [TaxId: | 92.02 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 91.92 | |
| d1jzta_ | 243 | Hypothetical protein YNL200c (YNU0_YEAST) {Baker's | 91.9 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 91.89 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 91.88 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.85 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 91.84 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 91.78 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 91.7 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 91.48 | |
| d1xdia1 | 233 | Dihydrolipoamide dehydrogenase {Mycobacterium tube | 91.31 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 91.3 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 91.01 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 90.86 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 90.81 | |
| d1ve1a1 | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 90.66 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 90.55 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 90.49 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 90.43 | |
| d1chua2 | 305 | L-aspartate oxidase {Escherichia coli [TaxId: 562] | 90.36 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 90.3 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 89.84 | |
| d1kf6a2 | 311 | Fumarate reductase {Escherichia coli [TaxId: 562]} | 89.77 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 89.52 | |
| d1aoga1 | 238 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 89.4 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 89.36 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 89.22 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 89.15 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 88.79 | |
| d1trba2 | 126 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 88.69 | |
| d1feca1 | 240 | Trypanothione reductase {Crithidia fasciculata [Ta | 88.15 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 88.13 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 88.12 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 88.06 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.83 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 87.81 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 87.77 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 87.23 | |
| d1ve5a1 | 310 | Threonine deaminase {Thermus thermophilus [TaxId: | 86.86 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 86.42 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 85.4 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 85.38 | |
| d2ayia1 | 406 | Aminopeptidase T {Thermus thermophilus [TaxId: 274 | 85.37 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 85.31 | |
| d1qopb_ | 390 | Tryptophan synthase, beta-subunit {Salmonella typh | 84.85 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 84.83 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 84.68 | |
| d2bm8a1 | 232 | Cephalosporin hydroxylase CmcI {Streptomyces clavu | 84.36 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 84.22 | |
| d1v7ca_ | 351 | Threonine synthase {Thermus thermophilus [TaxId: 2 | 83.87 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 82.85 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 82.8 | |
| d1zn7a1 | 178 | Adenine PRTase {Human (Homo sapiens) [TaxId: 9606] | 82.66 | |
| d3bswa1 | 193 | Acetyltransferase PglD {Campylobacter jejuni [TaxI | 81.35 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 80.64 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 80.61 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 80.46 |
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-30 Score=181.21 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=128.9
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV 93 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~ 93 (173)
+|+++||++++++.|||+++.+...+++|++|||+|+ |++|++++|+++.+|++|++++++++|++.+++ +|+++++|
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccc-cCcccccc
Confidence 5889999999999999999988888899999999997 999999999999999999999999999999998 99999999
Q ss_pred CCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccc
Q 030694 94 SRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHW 164 (173)
Q Consensus 94 ~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (173)
+++.+..+++. +++|++|||+|++ .++.++++++++|+++.+|..+ ..+++...++.++.++.+...+.
T Consensus 80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~ 153 (174)
T d1yb5a2 80 HREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS 153 (174)
T ss_dssp TTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred cccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence 98876655543 3799999999987 6999999999999999999644 47888889999988755443333
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=1.6e-30 Score=179.17 Aligned_cols=152 Identities=33% Similarity=0.560 Sum_probs=133.3
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+|++++|+++|++.|||+++++.. +++|++|+|+|+|++|++++|+++..|++|++++++++|++.+++ +|+++++|+
T Consensus 1 v~f~~aA~l~ca~~Ta~~al~~~~-~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCccccccc
Confidence 478999999999999999998865 599999999999999999999999999999999999999999999 999999998
Q ss_pred CChHHHHHh---cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccccccCCC
Q 030694 95 RDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 95 ~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (173)
.+.+..+++ ..+.+.++++++++..++.++++++++|+++.+|...+..+++..+++.|+++ +.+++.++++|+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~--i~Gs~~~~~~d~ 155 (166)
T d1llua2 79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLH--IAGSIVGTRADL 155 (166)
T ss_dssp TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCE--EEECCSCCHHHH
T ss_pred cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcE--EEEEeecCHHHH
Confidence 876554443 35788888888888889999999999999999998877789999999999988 556666665543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=9.3e-30 Score=175.73 Aligned_cols=152 Identities=44% Similarity=0.672 Sum_probs=130.1
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
.+++++|+++|++.|+|+++++. .+++|++|+|+|+|++|++++|+++.+|+++++++++++|++.+++ +|+++++|+
T Consensus 4 ~~~a~~Apl~Cag~Tay~al~~~-~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~-lGad~~i~~ 81 (168)
T d1uufa2 4 EQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNS 81 (168)
T ss_dssp GGHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEET
T ss_pred ccHHHHHHHHhHHHHHHHHHHHh-CCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhc-cCCcEEEEC
Confidence 45678889999999999999764 5599999999999999999999999999999999999999999998 999999999
Q ss_pred CChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccceeeeccccccCCC
Q 030694 95 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 95 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (173)
.+.+......+++|++|||+|.+..+..++++++++|+++.+|...+ ...++...++.++++ +.+++.+++.|+
T Consensus 82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~--i~Gs~~~~~~d~ 156 (168)
T d1uufa2 82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRA--IAGSMIGGIPET 156 (168)
T ss_dssp TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCE--EEECCSCCHHHH
T ss_pred chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcE--EEEEeecCHHHH
Confidence 98887776677999999999998789999999999999999997665 346788888888887 667777666554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=4.9e-30 Score=177.12 Aligned_cols=151 Identities=34% Similarity=0.502 Sum_probs=131.3
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
+.+.||+++|++.|+|+++++.. +++|++|+|+|+|++|++++|+++.+|++|++++++++|++.+++ +|+++++++.
T Consensus 2 p~e~AApl~cag~Ta~~al~~~~-~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-lGa~~~i~~~ 79 (168)
T d1piwa2 2 PSHLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATL 79 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHHHHTT-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEEGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHhC-cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhc-cCCcEEeecc
Confidence 34668899999999999998765 599999999999999999999999999999999999999999999 9999999876
Q ss_pred C-hHHHHHhcCCccEEEEcCCCcc--chHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccccccCCC
Q 030694 96 D-QDEMQAAMGTMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 96 ~-~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (173)
+ .++.+...+++|.++||++... .++.++++++++|+++.+|...+..+++..+++.|+.+ +.++++++++|+
T Consensus 80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~--i~Gs~~g~~~~~ 155 (168)
T d1piwa2 80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVS--ISYSALGSIKEL 155 (168)
T ss_dssp GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCE--EEECCCCCHHHH
T ss_pred chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcE--EEEEeeCCHHHH
Confidence 5 3555666779999999988753 46789999999999999998877788999999999887 667777776654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=1.4e-29 Score=175.52 Aligned_cols=149 Identities=19% Similarity=0.213 Sum_probs=125.0
Q ss_pred CCcccccchhhHHHHHHHHHH---hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE
Q 030694 15 APLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS 90 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~ 90 (173)
+|++|||+++++++|||++++ .....++|++|||+|+ |++|.+++|+++..|++|++++++++|.+.+++ +|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-cccce
Confidence 689999999999999997754 5577788999999997 999999999999999999999999999999999 99999
Q ss_pred EeeCCChHH--HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccceeeecccc
Q 030694 91 FLVSRDQDE--MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEEDSWWQSHWG 165 (173)
Q Consensus 91 v~~~~~~~~--~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 165 (173)
++|+++... ..... +++|++||++|+. .+..++++|+++|+++.+|...+ ..+++.+.++.|++++....++..
T Consensus 80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~ 157 (176)
T d1xa0a2 80 VLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYC 157 (176)
T ss_dssp EEECC---------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSC
T ss_pred eeecchhHHHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcC
Confidence 999875421 11112 3899999999999 69999999999999999998754 568999999999998555434443
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.96 E-value=9.1e-29 Score=171.13 Aligned_cols=140 Identities=27% Similarity=0.397 Sum_probs=118.3
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV 93 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~ 93 (173)
+|+||||++++++.|||+++.+ ..+++|++|+|+|+ |++|++++|+++..|++|++++++++|++.+++ +|+++++|
T Consensus 1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-cccceeee
Confidence 5889999999999999999987 56699999999997 999999999999999999999999999999998 99999999
Q ss_pred CCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccce
Q 030694 94 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEEDS 158 (173)
Q Consensus 94 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~ 158 (173)
+.+........+++|++|||+| + .+++++++++++|+++.+|..++ ..+++...++.|+.++.
T Consensus 79 ~~~~~~~~~~~~g~D~v~d~~G-~-~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~ 142 (171)
T d1iz0a2 79 YAEVPERAKAWGGLDLVLEVRG-K-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVL 142 (171)
T ss_dssp GGGHHHHHHHTTSEEEEEECSC-T-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEE
T ss_pred hhhhhhhhhccccccccccccc-h-hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEE
Confidence 8764333233458999999988 3 58999999999999999997764 45788999999988743
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.95 E-value=2.5e-29 Score=173.83 Aligned_cols=151 Identities=29% Similarity=0.346 Sum_probs=132.2
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEe
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFL 92 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~ 92 (173)
+|+.|||+++|++.|||+++++.. ++++++|+|+|+ |++|++++++++..|+ +|++++++++|++.+++ +|+++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al~~~~-~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~Ga~~~i 78 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADYVI 78 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTT-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cCCceee
Confidence 578899999999999999997765 599999999997 9999999999999996 99999999999999999 9999999
Q ss_pred eCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeecccccc
Q 030694 93 VSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVE 167 (173)
Q Consensus 93 ~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (173)
++++.+..+++. +++|++|||+|++..++.++++++++|+++.+|...++.+++...+++|+++ +.+++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~--i~Gs~~~~~ 156 (170)
T d1jvba2 79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQ--FVGSLVGNQ 156 (170)
T ss_dssp ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCE--EEECCSCCH
T ss_pred ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcE--EEEEecCCH
Confidence 988765544432 3799999999998788999999999999999998877789999999999987 556666655
Q ss_pred CC
Q 030694 168 GD 169 (173)
Q Consensus 168 ~~ 169 (173)
+|
T Consensus 157 ~d 158 (170)
T d1jvba2 157 SD 158 (170)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.95 E-value=5.9e-28 Score=167.47 Aligned_cols=146 Identities=23% Similarity=0.244 Sum_probs=126.5
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+++.+++++|++.|||+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++++++|++.+++ +|+++++|+
T Consensus 2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga~~~i~~ 80 (174)
T d1f8fa2 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINS 80 (174)
T ss_dssp CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCSEEEET
T ss_pred CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCCeEEEeC
Confidence 5678999999999999999888888999999999999999999999999999 56677889999999998 999999999
Q ss_pred CChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccCcccceeeeccc
Q 030694 95 RDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGEEEDSWWQSHW 164 (173)
Q Consensus 95 ~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 164 (173)
++.+..+++ . +++|++|||+|.+..++.++++++++|+++.+|.... ..+++..+++.++++ +.+++.
T Consensus 81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~--i~Gs~~ 154 (174)
T d1f8fa2 81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKT--ILGVVE 154 (174)
T ss_dssp TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCE--EEECSG
T ss_pred CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCE--EEEEEe
Confidence 876555443 2 4899999999998888999999999999999997543 468889999999987 445443
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=1.7e-28 Score=171.43 Aligned_cols=149 Identities=26% Similarity=0.346 Sum_probs=123.5
Q ss_pred cccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 17 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 17 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
++.+|++.|++.|||+++.+...+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++|+.
T Consensus 3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~ 81 (182)
T d1vj0a2 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLNRR 81 (182)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCSEEEETT
T ss_pred HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheeccccccccccccccccccccccccc-ccceEEEecc
Confidence 456789999999999999988888999999999999999999999999999 89999999999999998 9999999988
Q ss_pred ChHH------HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCcc-ccccCcccceeeeccc
Q 030694 96 DQDE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAF-PLLTGEEEDSWWQSHW 164 (173)
Q Consensus 96 ~~~~------~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~-~~~~~~~~~~~~~~~~ 164 (173)
+.+. +.+.. .++|++|||+|.+..++.++++++++|+++.+|...+ +.+++.. .++.|+++ +.+++.
T Consensus 82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~--i~G~~~ 159 (182)
T d1vj0a2 82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNAT--FKGIWV 159 (182)
T ss_dssp TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCE--EEECCC
T ss_pred ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcE--EEEEEe
Confidence 6432 22222 2799999999998788999999999999999997643 3455543 36678777 456665
Q ss_pred cccC
Q 030694 165 GVEG 168 (173)
Q Consensus 165 ~~~~ 168 (173)
++.+
T Consensus 160 ~~~~ 163 (182)
T d1vj0a2 160 SDTS 163 (182)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5544
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=1.6e-28 Score=169.24 Aligned_cols=151 Identities=32% Similarity=0.549 Sum_probs=131.6
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+|+|+||++++++.|||+++++... ++|++|+|+|+|++|++++++++..|++|++++++++|++.+++ +|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al~~~~~-~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHHTC-CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-cCcceeccc
Confidence 5899999999999999999988765 99999999999999999999999999999999999999999999 999999998
Q ss_pred CChHHH---HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccccccCC
Q 030694 95 RDQDEM---QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGD 169 (173)
Q Consensus 95 ~~~~~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (173)
.+.+.. .+...+.|.++++.++...++.++++++++|+++.+|...+..+++...++.++++ +.+++..++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~--i~gs~~~~~~~ 154 (168)
T d1rjwa2 79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK--IIGSIVGTRKD 154 (168)
T ss_dssp TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCE--EEECCSCCHHH
T ss_pred ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcE--EEEEeeCCHHH
Confidence 876443 33345777777888888789999999999999999998888889999999999987 55566555444
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.95 E-value=3.5e-27 Score=163.36 Aligned_cols=137 Identities=23% Similarity=0.320 Sum_probs=118.8
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+++++|.++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++.+++|++.+++ +|+++++++
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~~~i~~ 80 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNP 80 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCCcccCC
Confidence 5688999999999999999888888999999999999999999999999999 78899999999999999 999999986
Q ss_pred CChH-----HHHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCCcccCccccccC
Q 030694 95 RDQD-----EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 95 ~~~~-----~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
...+ ...... +++|++|||+|.+.+++.++++++++ |+++.+|...++.+++...++++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~~ 146 (174)
T d1e3ia2 81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG 146 (174)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTT
T ss_pred ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhcc
Confidence 5321 122222 49999999999998899999999996 99999998877778887776553
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.95 E-value=3.2e-28 Score=168.51 Aligned_cols=150 Identities=29% Similarity=0.362 Sum_probs=127.7
Q ss_pred cccccchhhHHHHHHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 17 LDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 17 ~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+.++|+++|+++|||+++.+.. .+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++++
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga~~~i~~ 84 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGADHVVDA 84 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCSEEEET
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cccceeecC
Confidence 4678999999999999998865 46899999999999999999999999998 78888999999999999 999999998
Q ss_pred CChHHH--HHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccccccCCC
Q 030694 95 RDQDEM--QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 95 ~~~~~~--~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (173)
++.+.. .+.. .++|++|||+|+...++.++++++++|+++.+|.. ++.++|...++.++++ +.+++.++++|+
T Consensus 85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~--i~Gs~~~~~~d~ 161 (172)
T d1h2ba2 85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVS--FEGSLVGNYVEL 161 (172)
T ss_dssp TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCE--EEECCSCCHHHH
T ss_pred cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcE--EEEEEecCHHHH
Confidence 864432 2222 27999999999987899999999999999999964 4578999999999887 667777666554
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.4e-27 Score=166.11 Aligned_cols=138 Identities=22% Similarity=0.248 Sum_probs=120.2
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV 93 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~ 93 (173)
+|+++||+++++++|||+++.+...+++|++|+|+|+ |++|++++|+++..|++|++++++++|++.+++ +|+++++|
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cCCeEEEE
Confidence 5889999999999999999998888899999999987 889999999999999999999999999999998 99999999
Q ss_pred CCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 94 SRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 94 ~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
+++.++.+++. .++|+++|++|++ .+..++.+++++|+++.+|...+ ...++...+..+.
T Consensus 80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 145 (179)
T d1qora2 80 YREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKG 145 (179)
T ss_dssp TTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTT
T ss_pred CCCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccCCccccchhhhhccc
Confidence 98876665543 2799999999987 69999999999999999987654 3455555544443
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.94 E-value=2.6e-27 Score=164.12 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=113.2
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEee
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLV 93 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~ 93 (173)
+|+|+|+.+++++.|||++++.. .+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++|
T Consensus 1 ip~e~A~~l~~~~~ta~~a~~~a-~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa~~~i~ 78 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGAELA-DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGATDILN 78 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHHHHT-TCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTCSEEEC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHh-CCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHh-hCcccccc
Confidence 57899999999999999999775 55999999999999999999999999998 79999999999999998 99999999
Q ss_pred CCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 94 SRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 94 ~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
+++.++.+++ .+ ++|++|||+|.+..+++++++++++|+++.+|.......++
T Consensus 79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~ 136 (174)
T d1jqba2 79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALL 136 (174)
T ss_dssp GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEE
T ss_pred ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCc
Confidence 8875544433 32 79999999999878999999999999999999766543333
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.94 E-value=4.8e-26 Score=157.70 Aligned_cols=147 Identities=27% Similarity=0.329 Sum_probs=117.4
Q ss_pred cccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 17 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 17 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
+.+||.|.|++.|+|+++.+...+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++|++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa~~~i~~~ 80 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLNPK 80 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCSEEECGG
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCCcEEEcCC
Confidence 567899999999999999887778999999999999999999999999998 89999999999999999 9999999876
Q ss_pred ChH-----HHHHhc-CCccEEEEcCCCccchHHHHHhhhc-CCEEEEeCCCCCCcccCccc-cccCcccceeeeccccc
Q 030694 96 DQD-----EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLLGAPEKPLELPAFP-LLTGEEEDSWWQSHWGV 166 (173)
Q Consensus 96 ~~~-----~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (173)
..+ ...... +++|++||++|....+...+..+++ +|+++.+|.......+++.+ ++.++.+ +.+++.++
T Consensus 81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~--i~Gs~~G~ 157 (174)
T d1p0fa2 81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRS--LKGSVFGG 157 (174)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCE--EEECSGGG
T ss_pred CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCE--EEEEEeCC
Confidence 432 112222 4899999999999888888888866 59999999766544454432 2234444 44555443
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.2e-26 Score=159.07 Aligned_cols=145 Identities=26% Similarity=0.244 Sum_probs=123.4
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEee
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLV 93 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~ 93 (173)
+|+|+|| +..+..+||+++++... ++|++|+|+|+|++|++++|+++..|+ +|++++++++|++.+++ +|++++++
T Consensus 1 vS~e~Aa-l~epla~a~~a~~~~~~-~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~Ga~~~~~ 77 (171)
T d1pl8a2 1 VTFEEGA-LIEPLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLVLQ 77 (171)
T ss_dssp SCHHHHH-HHHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEE
T ss_pred CCHHHHH-HHHHHHHHHHHHHHhCC-CCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hCCccccc
Confidence 4677866 55677889999988765 999999999999999999999999999 89999999999999998 99999988
Q ss_pred CCChHH---HHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeeeccc
Q 030694 94 SRDQDE---MQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHW 164 (173)
Q Consensus 94 ~~~~~~---~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (173)
+...+. .+.+ ..++|++|||+|++..++.++++++++|+++.+|.+.+..++|...++.|++.+ .+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i--~Gs~~ 153 (171)
T d1pl8a2 78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDI--KGVFR 153 (171)
T ss_dssp CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEE--EECCS
T ss_pred ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEE--EEEeC
Confidence 775432 1111 238999999999998899999999999999999988877899999999999874 44443
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.94 E-value=8.9e-26 Score=155.74 Aligned_cols=141 Identities=26% Similarity=0.269 Sum_probs=119.3
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
+|+|+|| +..+.++||+++.+... ++|++|+|+|+|++|++++|+++..|++|++++++++|++.+++ +|++..++.
T Consensus 1 VS~e~Aa-l~ePla~a~~a~~~~~~-~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGA-LLEPLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTLVV 77 (170)
T ss_dssp SCHHHHH-THHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEEC
T ss_pred CCHHHHH-HHHHHHHHHHHHHHhCC-CCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEEec
Confidence 4678866 44567789999988765 99999999999999999999999999999999999999999999 998877655
Q ss_pred CCh-----HHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccce
Q 030694 95 RDQ-----DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDS 158 (173)
Q Consensus 95 ~~~-----~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 158 (173)
+.. +..+++ . +++|++|||+|++..++.++++++++|+++.+|.+.+..++|+..++.|++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~ 150 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIK 150 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEE
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEE
Confidence 431 222222 2 389999999999988999999999999999999887778899999999998743
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=1.3e-26 Score=161.67 Aligned_cols=122 Identities=23% Similarity=0.327 Sum_probs=110.7
Q ss_pred ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 18 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 18 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
||||++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+++ +|+++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~Ga~~vi~~~~ 79 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYVGDSRS 79 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCCSEEEETTC
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-ccccccccCCc
Confidence 5789999999999999998888899999999997 999999999999999999999999999999988 99999999988
Q ss_pred hHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 97 QDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 97 ~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.++.+++. .++|++|||+|++ .++.++++++++|+++.+|..++
T Consensus 80 ~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~ 128 (183)
T d1pqwa_ 80 VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDV 128 (183)
T ss_dssp STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGG
T ss_pred cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCC
Confidence 76655542 3899999999997 68999999999999999996654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.93 E-value=2.3e-26 Score=160.49 Aligned_cols=138 Identities=22% Similarity=0.221 Sum_probs=117.6
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+++.++++|||+++.+...+++|++|||+|+ |++|++++|+++..|++|++++++++|.+.+++ +|+++++++++.+.
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~~~ 86 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTVNS 86 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSCSC
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-hhhhhhcccccccH
Confidence 5788999999999999998999999999998 899999999999999999999999999999999 99999999887654
Q ss_pred HHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-------CcccCccccccCcccceee
Q 030694 100 MQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-------PLELPAFPLLTGEEEDSWW 160 (173)
Q Consensus 100 ~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~~~~~ 160 (173)
.++.. +++|++|||+|++ .+++++++++++|+++.+|..++ ...++...++.|+.++..+
T Consensus 87 ~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~ 158 (182)
T d1v3va2 87 LEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGF 158 (182)
T ss_dssp HHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEEC
T ss_pred HHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEE
Confidence 43322 3899999999987 69999999999999999996432 2345566788888875443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.5e-27 Score=164.35 Aligned_cols=143 Identities=21% Similarity=0.228 Sum_probs=122.3
Q ss_pred CCcccccchhhHHHHHHHHHH---hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE
Q 030694 15 APLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS 90 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~ 90 (173)
+|+.+|+++++++.|||++++ +....+++++|||+|+ |++|.+++|++|.+|++|++++++++|.+.+++ +|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~-lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh-hcccc
Confidence 578899999999999997764 4455456679999988 999999999999999999999999999999988 99999
Q ss_pred EeeCCChHHHHHhcC-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCccccee
Q 030694 91 FLVSRDQDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEEDSW 159 (173)
Q Consensus 91 v~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~ 159 (173)
++|+++.++.+.+.. ..|.++|++|++ .+...+++++++|+++.+|..++ ..++|...++.|+.++.+
T Consensus 80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G 149 (177)
T d1o89a2 80 VLPRDEFAESRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQG 149 (177)
T ss_dssp EEEGGGSSSCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEE
T ss_pred ccccccHHHHHHHHhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEE
Confidence 999876655444433 689999999998 69999999999999999997765 468888899888887544
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.93 E-value=9.3e-26 Score=156.47 Aligned_cols=146 Identities=20% Similarity=0.344 Sum_probs=118.4
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
++++||.++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++..|+ +|++++.+++|++.+++ +|+++++|+
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~in~ 81 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISP 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEECG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEECc
Confidence 4789999999999999999887778999999999999999999999999997 89999999999999999 999999997
Q ss_pred CChHH----HHHh-c-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCCc--ccCccccccCcccceeeecccc
Q 030694 95 RDQDE----MQAA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPL--ELPAFPLLTGEEEDSWWQSHWG 165 (173)
Q Consensus 95 ~~~~~----~~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 165 (173)
++.+. ..+. . +++|++||++|.+..+..++..+.++ |+++.+|...+.. .++...++ ++.. +.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~--i~Gs~~G 158 (176)
T d1d1ta2 82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRT--WKGCVFG 158 (176)
T ss_dssp GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCE--EEECSGG
T ss_pred cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCE--EEEEEEe
Confidence 75432 2221 2 48999999999998788888877665 9999999876543 44444444 3444 3445544
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.93 E-value=6.1e-25 Score=152.24 Aligned_cols=148 Identities=20% Similarity=0.231 Sum_probs=116.3
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
++|+||+++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++|+
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lGa~~~i~~ 80 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECINP 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCSEEECG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hCCcEEEeC
Confidence 5688999999999999999887778999999999999999999999999997 78888899999999998 999999988
Q ss_pred CCh-H----HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccCcccceeeeccccc
Q 030694 95 RDQ-D----EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGEEEDSWWQSHWGV 166 (173)
Q Consensus 95 ~~~-~----~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (173)
.+. + .++... +++|++||++|....+..++.+++++|+++.++.... ....+....+.++++ +.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--i~Gs~~G~ 158 (176)
T d2fzwa2 81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRT--WKGTAFGG 158 (176)
T ss_dssp GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCE--EEECSGGG
T ss_pred CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCE--EEEEeeeC
Confidence 642 2 222222 4899999999999888899999999988877754432 233333444445554 44554443
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.92 E-value=1.4e-25 Score=157.35 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=119.0
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCeEEEEeCCcch----HHHHHHHcCC
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAVERLGA 88 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~----~~~~~~~~g~ 88 (173)
+|+++||+++++++|||+++.+...+++|++++|+ |+ |++|++++|++|.+|++|++++++.++ .+.+++ +|+
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~-lGa 79 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGA 79 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh-ccc
Confidence 58899999999999999999998888999999997 55 899999999999999999999876554 345566 999
Q ss_pred CEEeeCCChH------HHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccc
Q 030694 89 DSFLVSRDQD------EMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEED 157 (173)
Q Consensus 89 ~~v~~~~~~~------~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 157 (173)
++++++++.+ ...++ .+++|++||++|++ .+..++++|+++|+++.+|..++ ..++|...+++|+.++
T Consensus 80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i 158 (189)
T d1gu7a2 80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS 158 (189)
T ss_dssp SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence 9999875432 12222 24799999999988 58999999999999999997654 5688999999888865
Q ss_pred ee
Q 030694 158 SW 159 (173)
Q Consensus 158 ~~ 159 (173)
..
T Consensus 159 ~G 160 (189)
T d1gu7a2 159 AG 160 (189)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.92 E-value=1.8e-24 Score=149.75 Aligned_cols=147 Identities=23% Similarity=0.289 Sum_probs=118.0
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
++++||+++|++.|+|+++.+...+++|++|+|+|+|++|++++++++..|+ +|++++++++|++.+++ +|+++++|+
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd~~in~ 80 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFVNP 80 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCEEECG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCcEEEcC
Confidence 5788999999999999999887778999999999999999999999999988 79999999999999999 999999998
Q ss_pred CChH-HHHH---h-c-CCccEEEEcCCCccchHHHHHhhhcCC-EEEEeCCCCCCcccCccccccCcccceeeecccc
Q 030694 95 RDQD-EMQA---A-M-GTMDGIIDTVSAVHPLMPLIGLLKSQG-KLVLLGAPEKPLELPAFPLLTGEEEDSWWQSHWG 165 (173)
Q Consensus 95 ~~~~-~~~~---~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (173)
.+.+ ...+ . . +++|++||++|....+..++.+++++| +++..|...+...++...++.++.+ +.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~--i~Gs~~G 156 (175)
T d1cdoa2 81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRT--WKGSMFG 156 (175)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCE--EEECSGG
T ss_pred CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcE--EEEEEEe
Confidence 6532 1222 1 2 489999999999877888888887775 5555665555556666666666665 4455443
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.91 E-value=8.9e-24 Score=146.40 Aligned_cols=148 Identities=20% Similarity=0.285 Sum_probs=115.7
Q ss_pred CcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeC
Q 030694 16 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 16 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 94 (173)
++++||+++|++.|+|+++.+...+++|++|+|+|+|++|++++++++..|+ +|++++++++|++.+++ +|+++++++
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga~~~i~~ 80 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECVNP 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCCeeEEec
Confidence 4678999999999999999888888999999999999999999999999997 99999999999999999 999998887
Q ss_pred CCh-HH----HHHhc-CCccEEEEcCCCccchHHHHHhhhcCC-EEEEeCCCCCCc-ccCccccccCcccceeeeccccc
Q 030694 95 RDQ-DE----MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQG-KLVLLGAPEKPL-ELPAFPLLTGEEEDSWWQSHWGV 166 (173)
Q Consensus 95 ~~~-~~----~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 166 (173)
.+. +. .+... +++|++||++|.+..++.++..++++| +++..+...+.. ..+...++.+++. +.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--i~Gs~~G~ 158 (176)
T d2jhfa2 81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT--WKGAIFGG 158 (176)
T ss_dssp GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCE--EEECSGGG
T ss_pred CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCE--EEEEEEeC
Confidence 542 21 22222 489999999999988888999998875 555555444433 3333455566665 44454443
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=4.4e-25 Score=151.57 Aligned_cols=138 Identities=22% Similarity=0.271 Sum_probs=113.3
Q ss_pred hhHHHHHHHH---HHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 24 LCAGITVYSP---LRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 24 ~~~~~ta~~~---l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
.+++.|||.+ +.+....+++++|||+|+ |++|.+++|+++.+|++|++++++++|.+.+++ +|++.++++++...
T Consensus 2 G~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~vi~~~~~~~ 80 (167)
T d1tt7a2 2 GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVYD 80 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHCS
T ss_pred CChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccceEeccchhc
Confidence 4567888755 455566577889999998 999999999999999999999999999999999 99999988643211
Q ss_pred --HHHh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccceeeecc
Q 030694 100 --MQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEEDSWWQSH 163 (173)
Q Consensus 100 --~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 163 (173)
.... .+++|++||++|++ .++.++++|+++|+++.+|...+ ..+++..+++.|++++....+.
T Consensus 81 ~~~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~ 147 (167)
T d1tt7a2 81 GTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV 147 (167)
T ss_dssp SCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred hhhhcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence 0001 13899999999999 69999999999999999998765 5789999999999986554443
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=7.2e-24 Score=148.24 Aligned_cols=124 Identities=19% Similarity=0.197 Sum_probs=101.4
Q ss_pred CCcccccchhhHHHHHHHHHHhhCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCcchHHHHHHHcCCCE
Q 030694 15 APLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVERLGADS 90 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~~~~~~~g~~~ 90 (173)
+|+.+. +++++++|||+++.....+++| ++|||+|+ |++|++++|+|+..|++ |+++++++++...+...+|+++
T Consensus 2 ~~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~ 80 (187)
T d1vj1a2 2 LSYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA 80 (187)
T ss_dssp GGGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred ccHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence 566664 4888999999999999888877 88999997 99999999999999995 5566777777776665599999
Q ss_pred EeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 91 FLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 91 v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|+.+++..+.+ . .++|++||++|++ .+..++++++++|+++.+|..+
T Consensus 81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~s 133 (187)
T d1vj1a2 81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGD-ISNTVISQMNENSHIILCGQIS 133 (187)
T ss_dssp EEETTSSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEEC----
T ss_pred EeeccchhHHHHHHHHhccCceEEEecCCch-hHHHHhhhccccccEEEecccc
Confidence 9999886544433 2 3899999999987 6999999999999999999654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.89 E-value=6.9e-23 Score=144.00 Aligned_cols=122 Identities=23% Similarity=0.173 Sum_probs=105.9
Q ss_pred ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 18 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 18 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
++.++|+....|||+++.+. .+++|++|+|+|+|++|++++++++..|+ +|++++.+++|++.+++ +|+++++++.+
T Consensus 2 ~d~~~l~d~~~ta~~a~~~a-~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~Ga~~~~~~~~ 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFEIADLSLD 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCEEEETTSS
T ss_pred chHHhcccHHHHHHHHHHHh-CCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhh-ccccEEEeCCC
Confidence 45678999999999999775 56999999999999999999999999999 89999999999999999 99999998877
Q ss_pred hHHHHHh---c--CCccEEEEcCCCc---------------cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 97 QDEMQAA---M--GTMDGIIDTVSAV---------------HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 97 ~~~~~~~---~--~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+..+++ . .++|++||++|.+ ..++.++++++++|+++.+|.+.+
T Consensus 80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~ 144 (195)
T d1kola2 80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVT 144 (195)
T ss_dssp SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCS
T ss_pred cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCC
Confidence 6554443 2 2899999999953 468899999999999999997653
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=1.1e-16 Score=94.73 Aligned_cols=73 Identities=25% Similarity=0.276 Sum_probs=65.8
Q ss_pred CCcccccchhhHHHHHHHHHH---hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC
Q 030694 15 APLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA 88 (173)
Q Consensus 15 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~ 88 (173)
+|++||+.+++++.|||++++ +....+++++++|+|+ |++|.+++|+++..|++|+++.+++++.+.+++ +|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~-lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH-CCC
Confidence 578999999999999998875 4455588999999998 999999999999999999999999999999988 874
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=99.13 E-value=3.4e-10 Score=75.73 Aligned_cols=100 Identities=19% Similarity=0.236 Sum_probs=82.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
+..+|+|+|+|..|+.+++.++.+|++|++++.+.+++++++..++........+...+.+.....|++|.++-.+.
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a 110 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 110 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence 45789999999999999999999999999999999999999986664333334555666666678999999987652
Q ss_pred ---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
....+++.|+||+.++++..-++
T Consensus 111 P~lIt~~mv~~Mk~GSVIVDvaidqG 136 (168)
T d1pjca1 111 PILVPASLVEQMRTGSVIVDVAVDQG 136 (168)
T ss_dssp CCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred CeeecHHHHhhcCCCcEEEEeecCCC
Confidence 34589999999999999987654
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.99 E-value=2.7e-09 Score=72.22 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=76.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee-CC----------------------ChH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV-SR----------------------DQD 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~-~~----------------------~~~ 98 (173)
+..+|+|+|+|..|+.+++.|+.+|++|++++.+.++++++++ ++...+-- .. +.+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~-l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH-hhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999 76543310 00 012
Q ss_pred HHHHhcCCccEEEEcCCCcc------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.+.....|++|.++-.+. .-+++++.|+||+.++++...++
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqG 155 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAG 155 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGT
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCC
Confidence 22333458999999887652 34689999999999999986554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.87 E-value=2.9e-08 Score=68.14 Aligned_cols=87 Identities=13% Similarity=0.082 Sum_probs=70.1
Q ss_pred HHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CCEEeeCCChHHHHHhc
Q 030694 31 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLVSRDQDEMQAAM 104 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~ 104 (173)
+........--+|++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+++. .....|..+.+.+.+..
T Consensus 11 ~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 90 (191)
T d1luaa1 11 ALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV 90 (191)
T ss_dssp HHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred HHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh
Confidence 334445555568999999998 999999999999999999999999998877766543 23456777778888888
Q ss_pred CCccEEEEcCCCc
Q 030694 105 GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ~~~d~vid~~g~~ 117 (173)
+++|++|++.|..
T Consensus 91 ~~iDilin~Ag~g 103 (191)
T d1luaa1 91 KGAHFVFTAGAIG 103 (191)
T ss_dssp TTCSEEEECCCTT
T ss_pred cCcCeeeecCccc
Confidence 8999999998853
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=2.1e-07 Score=61.76 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=83.6
Q ss_pred HHHHHHHHh-hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCC
Q 030694 28 ITVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 28 ~ta~~~l~~-~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (173)
-+.+.++.+ ....-.|+++.|+|.|.+|...++.++..|++|++++.++.+.-++.- -|.. +. .+++....
T Consensus 8 ~S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-dG~~-v~------~~~~a~~~ 79 (163)
T d1li4a1 8 ESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAM-EGYE-VT------TMDEACQE 79 (163)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-EC------CHHHHTTT
T ss_pred hhHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhc-CceE-ee------ehhhhhhh
Confidence 344555544 455568999999999999999999999999999999999876544443 3432 32 23445667
Q ss_pred ccEEEEcCCCccch-HHHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 107 MDGIIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 107 ~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
.|+++-++|+...+ ...++.|+++..+..+|....++.++
T Consensus 80 adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~ 120 (163)
T d1li4a1 80 GNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVK 120 (163)
T ss_dssp CSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHH
T ss_pred ccEEEecCCCccchhHHHHHhccCCeEEEEeccccceecHH
Confidence 89999999997544 47888999999999999777655443
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.69 E-value=1.5e-07 Score=67.27 Aligned_cols=100 Identities=18% Similarity=0.276 Sum_probs=75.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe---eCCChHHHHH-------hcCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL---VSRDQDEMQA-------AMGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~---~~~~~~~~~~-------~~~~~d~v 110 (173)
+|++++|.|+ +++|++.++.+...|++|++.++++++++.+.++++..... |-.+.+..++ ..+++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 6899999998 89999999999999999999999999999888888865443 3333332222 23589999
Q ss_pred EEcCCCcc-------------------------chHHHHHhhh-cCCEEEEeCCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLLK-SQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 141 (173)
+++.|... ....+++.|+ .+|+++.+++..+
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~ 141 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS 141 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence 99999641 2345666675 5799999986554
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=7.7e-08 Score=68.45 Aligned_cols=99 Identities=21% Similarity=0.342 Sum_probs=75.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---EEeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 110 (173)
+|++++|.|+ +++|...++.+...|++|+++++++++++.+.++++.. ...|-.+.+..++. .+++|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 5899999998 89999999999999999999999999999888877643 23455554433332 3589999
Q ss_pred EEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~ 140 (173)
+++.|... ..+.+++.| +.+|+++.+++..
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~ 139 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV 139 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchh
Confidence 99988641 244666776 3468999998654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=1.7e-07 Score=66.64 Aligned_cols=101 Identities=18% Similarity=0.214 Sum_probs=76.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhc---CCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~---~~~d~vid~~ 114 (173)
-+|+++||.|+ +++|++.++.+...|++|+++++++++++.+.++++.. ...|-.+.+.+++.. +++|+++++.
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA 84 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence 46899999998 89999999999999999999999999998888767632 234556666555543 4899999999
Q ss_pred CCcc-------------------------chHHHHHh-hh--cCCEEEEeCCCCC
Q 030694 115 SAVH-------------------------PLMPLIGL-LK--SQGKLVLLGAPEK 141 (173)
Q Consensus 115 g~~~-------------------------~~~~~~~~-l~--~~G~~v~~g~~~~ 141 (173)
|... ..+.+++. ++ .+|+++.+++..+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~ 139 (244)
T d1pr9a_ 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS 139 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence 8741 12344553 33 3589999886543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.66 E-value=3.9e-07 Score=60.59 Aligned_cols=78 Identities=26% Similarity=0.300 Sum_probs=61.2
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEc
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
..... -.+.+++|+|+|.+|..+++.+...|+ +++++.|+.+|.+.+.+.+|.. .++. +.+.+....+|++|.|
T Consensus 17 ~~~~~-l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~---~~~~~~l~~~Divi~a 91 (159)
T d1gpja2 17 RELGS-LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF---DELVDHLARSDVVVSA 91 (159)
T ss_dssp HHHSC-CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG---GGHHHHHHTCSEEEEC
T ss_pred HHhCC-cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc---hhHHHHhccCCEEEEe
Confidence 34444 678999999999999999999999998 7999999988888777768854 3333 2333445589999999
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
++.+
T Consensus 92 tss~ 95 (159)
T d1gpja2 92 TAAP 95 (159)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 9976
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.64 E-value=2.3e-07 Score=66.09 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=74.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
-+|+++||.|+ +++|+..++.+...|++|++.++++++.+.+++ .+... ..|-.+.+.+++. .+++|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 81 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-IGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 81 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH-HTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 46899999998 899999999999999999999999888776666 67543 2444554433332 35899999
Q ss_pred EcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 112 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 112 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++.|... ..+.+++.|++ +|+++.+++..+
T Consensus 82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~ 138 (248)
T d2d1ya1 82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG 138 (248)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence 9998631 24466677754 589999986554
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.63 E-value=1.4e-07 Score=67.47 Aligned_cols=100 Identities=22% Similarity=0.365 Sum_probs=74.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.++++... ..|-.+.+.++++ .+++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 6899999998 899999999999999999999999999988888777432 2344444433332 2589999
Q ss_pred EEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 111 IDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+++.|... ..+.+++.|+ ++|+++.+++..+
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~ 141 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG 141 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence 99998641 2334555543 4689999986554
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=2e-07 Score=66.53 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=73.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
+|++++|.|+ +++|.+.++.+...|++|++.++++++++.+.++++... ..|-++.+.++++ .+++|+++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999998 899999999999999999999999999998888666322 2344454433332 25899999
Q ss_pred EcCCCc--------------------------cchHHHHHhhhc-CCEEEEeCCCC
Q 030694 112 DTVSAV--------------------------HPLMPLIGLLKS-QGKLVLLGAPE 140 (173)
Q Consensus 112 d~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~~ 140 (173)
++.|.. ...+.+++.|++ +|+++.+++..
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~ 140 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLV 140 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccc
Confidence 999852 023456666654 58999988654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.60 E-value=1.7e-07 Score=66.71 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=75.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-+|++++|.|+ +++|+..++.+...|++|+++++++++++.+.++++.... .|-.+.+.+++. .+++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 46899999998 8999999999999999999999999999888887764322 344444433322 358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 142 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 142 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence 999999741 1234555553 4589999986554
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.58 E-value=4.6e-07 Score=64.29 Aligned_cols=76 Identities=24% Similarity=0.319 Sum_probs=61.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhc---CCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~---~~~d~vid~~g 115 (173)
+|+++||.|+ +++|.+.++.+...|++|+++++++++++.+.++++.. ...|-.+.+.+++.. +++|+++++.|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 5899999998 89999999999999999999999999988888766532 234555555555543 48999999998
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 84 ~~ 85 (242)
T d1cyda_ 84 LV 85 (242)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=5e-07 Score=64.49 Aligned_cols=100 Identities=14% Similarity=0.197 Sum_probs=72.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-----CE---EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----DS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~---v~~~~~~~~~~~~-------~~ 105 (173)
.|+++||.|+ +++|++.++.+...|++|+++++++++++.+.+++.. .. ..|-++.+.+++. .+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 5899999998 8999999999999999999999999988877665421 11 2344454433332 25
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhhc-----CCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~~ 141 (173)
++|+++++.|... ....+++.|++ +|+++.+++..+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~ 139 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 139 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence 8999999999752 12344555543 488999986544
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=98.56 E-value=9.8e-07 Score=58.24 Aligned_cols=107 Identities=14% Similarity=0.171 Sum_probs=82.0
Q ss_pred HHHHH-hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLR-FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~-~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++. .....-.|++++|+|-|-+|.-.++.++.+|++|++++.++-+. ++....-..+. .+++..+..|+
T Consensus 10 ~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lqA~mdGf~v~------~~~~a~~~aDi 81 (163)
T d1v8ba1 10 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICA--IQAVMEGFNVV------TLDEIVDKGDF 81 (163)
T ss_dssp HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHH--HHHHTTTCEEC------CHHHHTTTCSE
T ss_pred HHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhh--HHHHhcCCccC------chhHccccCcE
Confidence 44443 33555789999999999999999999999999999999999654 33323222332 24456678899
Q ss_pred EEEcCCCccch-HHHHHhhhcCCEEEEeCCCCCCccc
Q 030694 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEKPLEL 145 (173)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~ 145 (173)
++.++|+.+.+ ...++.|+.+..+...|....++.+
T Consensus 82 ~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv 118 (163)
T d1v8ba1 82 FITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQV 118 (163)
T ss_dssp EEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCH
T ss_pred EEEcCCCCccccHHHHHHhhCCeEEEeccccchhhhh
Confidence 99999998654 4778999999999999987765544
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.55 E-value=2.8e-07 Score=65.96 Aligned_cols=76 Identities=16% Similarity=0.294 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~v 110 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++|.... .|-.+.+.+++. .+++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 5899999998 8999999999999999999999999999888888885432 344454433332 2589999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+++.|..
T Consensus 84 VnnAg~~ 90 (256)
T d1k2wa_ 84 VNNAALF 90 (256)
T ss_dssp EECCCCC
T ss_pred Eeecccc
Confidence 9999964
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=98.53 E-value=1.7e-07 Score=65.28 Aligned_cols=100 Identities=21% Similarity=0.161 Sum_probs=70.3
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~ 109 (173)
....+++|++||-+|+|. |..++.+++..| .+|+.++.+++..+.+++.+ +.+ ..+...+........+.||+
T Consensus 69 ~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~ 147 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDV 147 (213)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhh
Confidence 344569999999999974 778888888776 48999999999888887743 322 12111221111112347999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++.+.+-....+.+++.|+|||+++..
T Consensus 148 I~~~~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 148 IFVTVGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp EEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred hhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence 998877766567889999999999873
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.51 E-value=7.7e-07 Score=63.72 Aligned_cols=99 Identities=13% Similarity=0.217 Sum_probs=71.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ |.+. ..|-.+.+.+++. .+++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999998 89999999999999999999999999888776644 3322 2344444333322 3589
Q ss_pred cEEEEcCCCcc--------------------------chHHHHHhh--hcCCEEEEeCCCC
Q 030694 108 DGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLLGAPE 140 (173)
Q Consensus 108 d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~ 140 (173)
|+++++.|... ..+.+++.| +.+|+++.+++..
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~ 144 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMA 144 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechh
Confidence 99999988530 233455555 4679999998644
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=4.8e-07 Score=64.28 Aligned_cols=105 Identities=12% Similarity=0.262 Sum_probs=75.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH-------hcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~~ 106 (173)
-.|++++|.|+ +++|...+......|++|++.++++++++.+.+++ |... ..|-++.+.++. ..+.
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 46899999998 89999999999999999999999999888776643 3321 234445433322 2358
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCCCccc
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEKPLEL 145 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~~ 145 (173)
+|+++++.|... ....+++.|++ .|+++.+++..+....
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~ 150 (244)
T d1yb1a_ 85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV 150 (244)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH
T ss_pred CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC
Confidence 999999999851 23456666754 4789999877654433
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.49 E-value=4.9e-07 Score=64.47 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=72.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-E--EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-S--FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~-------~~~~d 108 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+.++. . . ..|-.+.+.++++ .+++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 5899999998 8999999999999999999999999998888776652 1 1 2344444433322 35899
Q ss_pred EEEEcCCCcc-------------------------chHHHHHhhhc---CCEEEEeCCCCC
Q 030694 109 GIIDTVSAVH-------------------------PLMPLIGLLKS---QGKLVLLGAPEK 141 (173)
Q Consensus 109 ~vid~~g~~~-------------------------~~~~~~~~l~~---~G~~v~~g~~~~ 141 (173)
+++++.|... ....+++.|++ +|+++.+++..+
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~ 145 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence 9999998741 23455666643 358888876543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.49 E-value=6.4e-07 Score=63.86 Aligned_cols=98 Identities=20% Similarity=0.290 Sum_probs=71.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH----HcCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE----RLGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
+|++++|.|+ +++|+..++.+...|++|+++++++++++...+ ..|.+. ..|-.+.+.+++. .++
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5899999998 899999999999999999999999888765543 245432 2344444433332 358
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAP 139 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~ 139 (173)
+|+++++.|... ..+.+++.|+ .+|+++.+++.
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL 143 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence 999999998641 2446677774 45799998764
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.48 E-value=6e-07 Score=64.86 Aligned_cols=75 Identities=27% Similarity=0.342 Sum_probs=59.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++|... ..|-.+.+..++. .+++|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 5899999998 899999999999999999999999999988887777432 2344444433332 3589999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
+++.|.
T Consensus 84 vnnAG~ 89 (276)
T d1bdba_ 84 IPNAGI 89 (276)
T ss_dssp ECCCCC
T ss_pred cccccc
Confidence 999984
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.48 E-value=1.5e-06 Score=62.47 Aligned_cols=99 Identities=15% Similarity=0.275 Sum_probs=72.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC---E--EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---S--FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~-------~~~~d 108 (173)
+|+++||.|+ +++|+..++.+...|++|+++++++++++.+.++++.. . ..|-.+.+.+++. .+++|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 6899999998 89999999999999999999999999988888766531 1 2244444433332 35899
Q ss_pred EEEEcCCCcc---------------------------chHHHHHhhh--cCCEEEEeCCCC
Q 030694 109 GIIDTVSAVH---------------------------PLMPLIGLLK--SQGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~---------------------------~~~~~~~~l~--~~G~~v~~g~~~ 140 (173)
+++++.|... ..+.+++.|. .+|+++.+++..
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~ 145 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS 145 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGG
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccc
Confidence 9999998520 2335666664 457888887543
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.47 E-value=7.5e-07 Score=59.64 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=71.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee--CCChHHHHHhcCCccEEEEcCCCccch
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
+++|+|+|+|.+|..+++.+...|.+|++++++.++.+.+.+.++...+.. ..............|.++.+++.....
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~ 81 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 81 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhh
Confidence 689999999999999999999999999999999999999888566433322 122344444556889999888876544
Q ss_pred HHHHHhhhcCCEEEEeCC
Q 030694 121 MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~ 138 (173)
.....+.+.+..++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~ 99 (182)
T d1e5qa1 82 TVIKSAIRQKKHVVTTSY 99 (182)
T ss_dssp HHHHHHHHHTCEEECSSC
T ss_pred HHHHHHHhhccceeeccc
Confidence 455566666667766653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=4e-07 Score=61.12 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=69.6
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.+++.......++++|+|+|+|+.+.+++..+...|++++++.|+.+|.+.+.+.+.....+.....+. .....+|++
T Consensus 6 ~~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~--~~~~~~dli 83 (170)
T d1nyta1 6 LSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE--LEGHEFDLI 83 (170)
T ss_dssp HHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG--GTTCCCSEE
T ss_pred HHHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc--cccccccee
Confidence 344556665578999999999999999999999999999999999999888877554211111111111 113479999
Q ss_pred EEcCCCccc---hHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAVHP---LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~~~---~~~~~~~l~~~G~~v~~g 137 (173)
|+|++.... ...-...++++..++.+-
T Consensus 84 IN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v 113 (170)
T d1nyta1 84 INATSSGISGDIPAIPSSLIHPGIYCYDMF 113 (170)
T ss_dssp EECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred ecccccCcccCCCCCcHHHhccCcEEEEee
Confidence 999976411 111123456666666554
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1.3e-06 Score=62.45 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=57.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CCEE----eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-ADSF----LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~v----~~~~~~~~~~~~-------~~ 105 (173)
+|+++||.|+ +++|+..++.+...|++|+++++++++++.+.+++ + ...+ .|-.+++.+++. .+
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 89999999999999999999999999888775543 2 1222 244454433332 35
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
++|++|++.|..
T Consensus 89 ~iD~lVnnAg~~ 100 (257)
T d1xg5a_ 89 GVDICINNAGLA 100 (257)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEeccccc
Confidence 899999999874
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=98.44 E-value=6.9e-07 Score=59.79 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=68.9
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
..+..... .++++|+|+|+|+.+.+++..++..|+ +++++.|+.+|.+.+.+.++...+ +... ...+|++
T Consensus 7 ~~l~~~~~-~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------~~~~Dli 77 (167)
T d1npya1 7 KLIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------NQQADIL 77 (167)
T ss_dssp HHHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------TCCCSEE
T ss_pred HHHHHcCC-CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------ccchhhh
Confidence 34555555 578999999999999999999999998 899999999998888886775443 2111 2368999
Q ss_pred EEcCCCcc-----c--hHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAVH-----P--LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~~-----~--~~~~~~~l~~~G~~v~~g 137 (173)
|+|++... . +.-....+.+...++.+-
T Consensus 78 INaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~v 111 (167)
T d1npya1 78 VNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV 111 (167)
T ss_dssp EECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC
T ss_pred eeccccCCccccccccccccHhhcCCcceEEEEe
Confidence 99987420 0 111123456666776664
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.44 E-value=9e-07 Score=63.33 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=71.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cC-C
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MG-T 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~-~ 106 (173)
+|+++||.|+ +++|++.++.+...|++|++.++++++++.+.+++ |... ..|-.+.+..++ + .+ +
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999998 89999999999999999999999999887776644 3222 234444433222 2 23 6
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 148 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG 148 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence 999999999641 1234555563 4689999986554
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.43 E-value=2.5e-07 Score=64.50 Aligned_cols=98 Identities=29% Similarity=0.293 Sum_probs=69.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEE-eeCCChHHHHHhcCCccEEEEc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~vid~ 113 (173)
..++++++||.+|+| +|..++.+++..|.+|+.++.+++-.+.+++. +|.+.+ +...+...-....+.+|.++-+
T Consensus 74 L~l~~g~~VLeIGsG-sGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv~ 152 (215)
T d1jg1a_ 74 ANLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVT 152 (215)
T ss_dssp HTCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred hccCccceEEEecCC-CChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEee
Confidence 345999999999987 57888888888888899999998766666553 453322 2222221111123489999988
Q ss_pred CCCccchHHHHHhhhcCCEEEEe
Q 030694 114 VSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 114 ~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
.+.......++..|++||+++..
T Consensus 153 ~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 153 AGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp SBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cccccCCHHHHHhcCCCCEEEEE
Confidence 77776667889999999999874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.43 E-value=2.8e-06 Score=60.66 Aligned_cols=100 Identities=18% Similarity=0.274 Sum_probs=70.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ +... ..|-.+.+.+++. .+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 89999999999999999999999998877665433 2221 2244554433332 35
Q ss_pred CccEEEEcCCCc--------------------------cchHHHHHhhh--cCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAV--------------------------HPLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
++|+++++.|.. ...+.++..|+ .+|+++.+++..+
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 146 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG 146 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence 899999998842 01334555553 5689999986554
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=98.41 E-value=7.5e-07 Score=62.41 Aligned_cols=98 Identities=17% Similarity=0.073 Sum_probs=69.2
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCccEEEE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
....+++|++||-+|+| .|..++.+++. +.+|+.++.+++..+.+++.+.. ..++..+..... ...+.||.++-
T Consensus 64 ~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~-~~~~pfD~Iiv 140 (224)
T d1vbfa_ 64 DELDLHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVV 140 (224)
T ss_dssp HHTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred HHhhhcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcc-hhhhhHHHHHh
Confidence 44456999999999997 57777767764 56999999999988888875442 122222211100 11347999997
Q ss_pred cCCCccchHHHHHhhhcCCEEEEe
Q 030694 113 TVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 ~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+.+...+.++++|++||+++..
T Consensus 141 ~~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 141 WATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp SSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred hcchhhhhHHHHHhcCCCCEEEEE
Confidence 777666667888999999998875
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.41 E-value=1.3e-06 Score=62.22 Aligned_cols=100 Identities=15% Similarity=0.204 Sum_probs=71.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+++.++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ |... ..|-.+.+.+++. .+++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 5889999998 89999999999999999999999998887766543 3322 2344444433322 3589
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
|+++++.|... ..+.+++.| +++|++|.+++..+
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 149 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG 149 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence 99999998741 233455555 45699999986543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.41 E-value=8.5e-07 Score=63.50 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=68.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h----cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A----MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~----~~~ 106 (173)
+|++++|.|+ +++|+..++.+...|++|+++++++++++.+.+++ +.. ...|-++.+..++ + .+.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999998 89999999999999999999999999887776544 222 1234444432222 2 246
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 148 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG 148 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence 999999999741 2335555553 4589999986554
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.40 E-value=1.8e-06 Score=61.12 Aligned_cols=100 Identities=23% Similarity=0.350 Sum_probs=75.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~~~d~ 109 (173)
-+|++++|.|+ +++|...++.+...|++|+++++++++++...++++.+.. .|-++.+.++++ .+++|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 36899999998 8999999999999999999999999999888887885432 344444433332 258999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++++.|... .....+..++.++.++.++...
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a 138 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA 138 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence 999987641 2335567777888877776554
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.39 E-value=5.9e-07 Score=63.80 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=59.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh---cCCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~---~~~~d~vid~~g 115 (173)
-+|+++||.|+ +++|++.++.+...|++|+++++++++++.+.+..+.. .+.|....+..+.. .+++|.++++.|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 36899999998 89999999999999999999999998888877744532 23344444333332 358999999998
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 84 ~~ 85 (245)
T d2ag5a1 84 FV 85 (245)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.37 E-value=8.6e-07 Score=62.83 Aligned_cols=76 Identities=18% Similarity=0.362 Sum_probs=60.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
+|++++|.|+ +++|+..++.+...|++|+++++++++++.+.++++... ..|-.+.+.+++. .+++|++++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 5899999998 899999999999999999999999999998888777543 3454554433332 258999999
Q ss_pred cCCCc
Q 030694 113 TVSAV 117 (173)
Q Consensus 113 ~~g~~ 117 (173)
+.|..
T Consensus 84 nAG~~ 88 (242)
T d1ulsa_ 84 YAGIT 88 (242)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99864
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.36 E-value=1.9e-06 Score=61.55 Aligned_cols=76 Identities=20% Similarity=0.272 Sum_probs=57.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------c-CC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------M-GT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~-~~ 106 (173)
+|+++||.|+ +++|.+.++.+...|++|+++++++++++.+.+++ +... ..|-++.+.+++. . +.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6899999998 99999999999999999999999998877765543 3322 2344454433222 2 46
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|+++++.|..
T Consensus 85 idilinnag~~ 95 (258)
T d1ae1a_ 85 LNILVNNAGVV 95 (258)
T ss_dssp CCEEEECCCCC
T ss_pred cEEEecccccc
Confidence 99999999875
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=1.1e-06 Score=62.84 Aligned_cols=76 Identities=18% Similarity=0.296 Sum_probs=57.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.++ .|... ..|-++.+.++++ .+++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999998 8999999999999999999999999887776554 34332 2344444433332 2589
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+++++.|..
T Consensus 90 DilvnnAG~~ 99 (255)
T d1fmca_ 90 DILVNNAGGG 99 (255)
T ss_dssp CEEEECCCCC
T ss_pred CEeeeCCcCC
Confidence 9999999874
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=9.8e-07 Score=61.84 Aligned_cols=96 Identities=26% Similarity=0.240 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC---C-------CEEeeCCChHHHHHhcCC
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG---A-------DSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g---~-------~~v~~~~~~~~~~~~~~~ 106 (173)
.+++|++||.+|+| .|..++.+++..| .+|+.++.+++-.+.+++.+. . ..+... +........+.
T Consensus 73 ~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g-D~~~~~~~~~~ 150 (224)
T d1i1na_ 73 QLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-DGRMGYAEEAP 150 (224)
T ss_dssp TSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-CGGGCCGGGCC
T ss_pred ccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe-ecccccchhhh
Confidence 56899999999997 5777778888765 389999999987777765432 1 111111 11110011347
Q ss_pred ccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 107 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 107 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
||+++.+.......+.+++.|+|||+++..
T Consensus 151 fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 151 YDAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred hhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 999998877776677899999999999874
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.34 E-value=2.9e-06 Score=57.01 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=64.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee-------CCC--hHHHHHhcCCccEEEEc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV-------SRD--QDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~-------~~~--~~~~~~~~~~~d~vid~ 113 (173)
++++.|+|+|.+|++++..+...|.+|+++++++++.+.+++ .+...... ... .....+.....|++|-+
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD-RGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 478999999999999999999999999999999999988887 44221110 000 12234455689999999
Q ss_pred CCCccchHHHHH----hhhcCCEEEEe
Q 030694 114 VSAVHPLMPLIG----LLKSQGKLVLL 136 (173)
Q Consensus 114 ~g~~~~~~~~~~----~l~~~G~~v~~ 136 (173)
+.... ....+. .+.++..++..
T Consensus 80 v~~~~-~~~~~~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 80 VPAIH-HASIAANIASYISEGQLIILN 105 (184)
T ss_dssp SCGGG-HHHHHHHHGGGCCTTCEEEES
T ss_pred EchhH-HHHHHHHhhhccCCCCEEEEe
Confidence 98773 454444 44455555443
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.34 E-value=3.3e-06 Score=59.89 Aligned_cols=100 Identities=14% Similarity=0.221 Sum_probs=69.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
+|+.++|.|+ +++|++.++.+...|++|++.++++++ .+...++.|... ..|-++.+.++++ .+++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5899999998 899999999999999999999987653 333333366432 2344454433332 358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.|+ .+|+++.+++..+
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 142 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY 142 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence 999998741 2335556664 4589999986554
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=5.8e-06 Score=55.87 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=72.6
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH---Hc----C-CCEEeeCCChHHHH
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE---RL----G-ADSFLVSRDQDEMQ 101 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~---~~----g-~~~v~~~~~~~~~~ 101 (173)
.+++.....--.+++|+|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.. ++ + ...+.+..+.+...
T Consensus 6 ~~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (182)
T d1vi2a1 6 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 85 (182)
T ss_dssp HHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred HHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence 3445555443578999999999999999999988998 89999998876654432 12 2 12344555555554
Q ss_pred HhcCCccEEEEcCCCcc------chHHHHHhhhcCCEEEEeCC
Q 030694 102 AAMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 102 ~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~ 138 (173)
+....+|++|+|++... .+..-+..++++..++.+-.
T Consensus 86 ~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y 128 (182)
T d1vi2a1 86 EALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY 128 (182)
T ss_dssp HHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred hhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence 55568999999987431 11112345777888887753
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=6.6e-07 Score=64.53 Aligned_cols=98 Identities=24% Similarity=0.377 Sum_probs=68.1
Q ss_pred CCCEE-EEEcC-ChHHHHHHHHH-HHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH-------hcC
Q 030694 42 PGMHV-GVVGL-GGLGHVAVKFA-KAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA-------AMG 105 (173)
Q Consensus 42 ~g~~v-lI~G~-g~~G~~a~~~~-~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~-------~~~ 105 (173)
.|++| ||.|+ +++|+.+++.+ +..|++|++.++++++.+.+.+++ +.. . ..|-++.+.+++ ..+
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 36777 56688 89999988755 445899999999999987776644 322 1 234444433222 235
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++|++|++.|... ..+.++..|++.|+++.+++.
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~ 139 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 139 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 8999999999631 234556777889999999864
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.30 E-value=3.9e-06 Score=59.87 Aligned_cols=100 Identities=14% Similarity=0.232 Sum_probs=69.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHH----HcCCCEE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVE----RLGADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~----~~g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
+|+++||.|+ +++|++.++.+...|++|+++++++ ++++.+.+ ..|.... .|-.+.+.++++ .+
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 6899999998 8999999999999999999999875 44444433 2354332 244444433332 25
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++|+++++.|... ..+.+++.|++ +|+++.+++..+
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 145 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG 145 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence 8999999999741 23455666653 589999986544
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=98.29 E-value=1.6e-05 Score=49.37 Aligned_cols=94 Identities=10% Similarity=0.005 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchH-HHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.|++|+|+|+|.+|..-++.+...|++|++++...... ..+.+ -+........-.+ +...++++++-+++....
T Consensus 10 l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i~~~~~~~~~---~dl~~~~lv~~at~d~~~ 85 (113)
T d1pjqa1 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLTLVEGPFDE---TLLDSCWLAIAATDDDTV 85 (113)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCEEEESSCCG---GGGTTCSEEEECCSCHHH
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCceeeccCCCH---HHhCCCcEEeecCCCHHH
Confidence 358999999999999999999999999999998755432 22222 2322333322111 224489999999999864
Q ss_pred hHHHHHhhhcCCEEEEeCC
Q 030694 120 LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~ 138 (173)
-.......++.|..+.+..
T Consensus 86 n~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 86 NQRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp HHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHHcCCEEEeCC
Confidence 4577778888899888764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.27 E-value=2.3e-06 Score=61.67 Aligned_cols=75 Identities=19% Similarity=0.349 Sum_probs=56.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C----EEeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D----SFLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~v~~~~~~~~~~~~-------~ 104 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ |. . ...|-.+.+.+++. .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5899999998 89999999999999999999999998887776543 21 1 12344454433332 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 83 G~iDilVnnAG~ 94 (274)
T d1xhla_ 83 GKIDILVNNAGA 94 (274)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeeccc
Confidence 589999999885
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=2e-06 Score=61.70 Aligned_cols=102 Identities=23% Similarity=0.263 Sum_probs=70.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE-E--eeCCChHH-------HHHhcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS-F--LVSRDQDE-------MQAAMG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~-v--~~~~~~~~-------~~~~~~ 105 (173)
-+|+++||.|+ +++|++.++.+...|++|+++++++++++.+.+++ +... . .+..+... ..+..+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 36899999998 89999999999999999999999999988876532 3221 1 12222222 222235
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhh-cCCEEEEeCCCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLK-SQGKLVLLGAPEKP 142 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~~ 142 (173)
.+|+++++.|... ....++..|+ .+|+++.+++..+.
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~ 154 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK 154 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc
Confidence 8999998887641 1334445554 47898888765543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.23 E-value=5.3e-06 Score=60.54 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=68.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc---------chHHHHHHHc---CCCEEeeCCChHHHHH------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVERL---GADSFLVSRDQDEMQA------ 102 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~v~~~~~~~~~~~------ 102 (173)
+|++++|.|+ +++|+..++.+...|++|++.+++. ++.+.+.+++ +.....+..+.+..++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 5899999998 8999999999999999999986543 3333333323 3444556555433222
Q ss_pred -hcCCccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCC
Q 030694 103 -AMGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPE 140 (173)
Q Consensus 103 -~~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~ 140 (173)
..+++|++|++.|... ..+.++..|+ .+|++|.+++..
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~ 151 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS 151 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChh
Confidence 2358999999998741 2446667674 458999998654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1.6e-06 Score=59.65 Aligned_cols=95 Identities=17% Similarity=0.210 Sum_probs=68.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
.++|+|+|+ |.+|..+++.+...|.+|+++.|+++++..... .+.+.+ .|..+.+.+.+...++|++|.++|....
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 578999998 999999999999999999999999888654433 333322 3555566677777899999999986421
Q ss_pred ---------hHHHHHhhhcCC--EEEEeCC
Q 030694 120 ---------LMPLIGLLKSQG--KLVLLGA 138 (173)
Q Consensus 120 ---------~~~~~~~l~~~G--~~v~~g~ 138 (173)
...+++.++..| +++.++.
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 224455555543 7887764
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=98.22 E-value=4.8e-06 Score=59.29 Aligned_cols=96 Identities=22% Similarity=0.251 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC-CEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA-DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
.++|++||=+|+| .|..++.++ ..|++|++++.+++..+.++++ .|. ..++..+..+. ...+.+|+++.+..
T Consensus 118 ~~~g~~VLDiGcG-sG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~--~~~~~fD~V~ani~ 193 (254)
T d2nxca1 118 LRPGDKVLDLGTG-SGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLY 193 (254)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECC
T ss_pred cCccCEEEEcccc-hhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc--ccccccchhhhccc
Confidence 4789999999987 355555544 4789999999999988888763 232 23333221221 12358999997654
Q ss_pred Cc---cchHHHHHhhhcCCEEEEeCCC
Q 030694 116 AV---HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 116 ~~---~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.. ..++.+.+.|+|||++++.|..
T Consensus 194 ~~~l~~l~~~~~~~LkpGG~lilSgil 220 (254)
T d2nxca1 194 AELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 43 2345677899999999987743
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.20 E-value=1.6e-05 Score=50.71 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=60.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHhc-CCccEEEEcCCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH 118 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~ 118 (173)
+|+|+|+|.+|...++.+...|..|++++.++++.+.+.++++...+. |..+.+.+.+.. ...|.++-++++..
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence 689999999999999999999999999999999999888766654332 445566666553 58999999988873
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.19 E-value=1.4e-06 Score=58.99 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=66.6
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-----------------eCCChH
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-----------------VSRDQD 98 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-----------------~~~~~~ 98 (173)
....+.++.+||.+|+| .|..+..+++ .|++|++++.+++-++.+++..+..... ..+..+
T Consensus 14 ~~l~~~~~~rvLd~GCG-~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (201)
T d1pjza_ 14 SSLNVVPGARVLVPLCG-KSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 91 (201)
T ss_dssp HHHCCCTTCEEEETTTC-CSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred HHcCCCCCCEEEEecCc-CCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence 33445899999999997 4677777776 5999999999999999998865422111 000011
Q ss_pred HHHHhcCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEEeC
Q 030694 99 EMQAAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
........+|.+++..... ..+..+.++|+|||+++...
T Consensus 92 l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~ 138 (201)
T d1pjza_ 92 LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 138 (201)
T ss_dssp STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred cccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence 1111223689988755533 23567889999999876543
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.18 E-value=1.9e-06 Score=60.31 Aligned_cols=98 Identities=22% Similarity=0.243 Sum_probs=63.4
Q ss_pred CCCCCCEEEEEcCC--hHHHHHHHHHHHCC----CeEEEEeCCcchHHHHHHHc--------C--CCEEeeCCChHHHHH
Q 030694 39 LDKPGMHVGVVGLG--GLGHVAVKFAKAMG----VKVTVISTSPSKKSEAVERL--------G--ADSFLVSRDQDEMQA 102 (173)
Q Consensus 39 ~~~~g~~vlI~G~g--~~G~~a~~~~~~~g----~~v~~~~~~~~~~~~~~~~~--------g--~~~v~~~~~~~~~~~ 102 (173)
.++++++||.+|+| -....+++++...| .+|+.++..++-.+.+++.+ + .-.++. .+...-..
T Consensus 77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~-~d~~~~~~ 155 (223)
T d1r18a_ 77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE-GDGRKGYP 155 (223)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SCGGGCCG
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe-cccccccc
Confidence 56899999999975 33333444455545 37999999987666665432 1 112222 22111111
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEE-eC
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL-LG 137 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~-~g 137 (173)
..+.||.++-+.+-+...+..++.|++||+++. +|
T Consensus 156 ~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg 191 (223)
T d1r18a_ 156 PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 191 (223)
T ss_dssp GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred cccceeeEEEEeechhchHHHHHhcCCCcEEEEEEe
Confidence 234799999888877666788899999999977 45
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.17 E-value=1.8e-06 Score=62.56 Aligned_cols=102 Identities=17% Similarity=0.119 Sum_probs=70.5
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CCEE-eeCCChHHHHHhcC
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-ADSF-LVSRDQDEMQAAMG 105 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~v-~~~~~~~~~~~~~~ 105 (173)
...+.....+++|++||-+|+| .|..+..+++..|++|+++..++++.+.+++.. | .+.+ +...+. .++.+
T Consensus 51 ~~~~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~ 126 (285)
T d1kpga_ 51 IDLALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDE 126 (285)
T ss_dssp HHHHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCC
T ss_pred HHHHHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hcccc
Confidence 4445555667999999999997 567778889999999999999999888887732 2 1111 111111 23345
Q ss_pred CccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEe
Q 030694 106 TMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 106 ~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (173)
.+|.++ +.++.. ..+..+.+.|+|||+++..
T Consensus 127 ~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~ 165 (285)
T d1kpga_ 127 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 165 (285)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence 788775 444433 2366788999999998754
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.16 E-value=1.4e-05 Score=56.99 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
+|++++|.|+ +++|+..++.+...|++|++++++.+ +.+.+.++ .|.+. ..|-.+.+.++++ .++
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999998 89999999999999999999998754 44433332 45332 2344444433332 258
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|+++++.|..
T Consensus 86 iDiLVnnAG~~ 96 (261)
T d1geea_ 86 LDVMINNAGLE 96 (261)
T ss_dssp CCEEEECCCCC
T ss_pred CCEeeccceec
Confidence 99999999874
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.16 E-value=1.4e-05 Score=56.10 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=66.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCC-hHHHHHhcCCccEEEEcCCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD-QDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+|+++||.|+ +++|...++.+...|++|++++++++++ ++ .+...+ .|-++ .+...+..+++|+++++.|...
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~~-~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~ 78 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KR-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK 78 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HH-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---Hh-cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence 5899999998 8999999999999999999999987544 33 454332 22222 2333344568999999998641
Q ss_pred -------------------------chHHHHHhhh--cCCEEEEeCCCC
Q 030694 119 -------------------------PLMPLIGLLK--SQGKLVLLGAPE 140 (173)
Q Consensus 119 -------------------------~~~~~~~~l~--~~G~~v~~g~~~ 140 (173)
..+.+++.|+ ..|+++.+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~ 127 (234)
T d1o5ia_ 79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 127 (234)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccc
Confidence 1334555554 457888887543
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.16 E-value=3.3e-06 Score=60.07 Aligned_cols=100 Identities=21% Similarity=0.280 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
+|+++||.|+ | ++|++.++.+...|++|++..++++..+.+.+ ..+.... .|-.+.+.++++ .++
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 6899999997 5 79999999999999999999998765554433 2333333 244444333332 358
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+|+++++.|... .....+..++++|+++.+++...
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~ 150 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS 150 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence 999999988520 11233455677899998875543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.15 E-value=4.2e-06 Score=60.12 Aligned_cols=75 Identities=19% Similarity=0.319 Sum_probs=57.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C----EEeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D----SFLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~v~~~~~~~~~~~~-------~ 104 (173)
+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ +. . ...|-.+.+.++++ .
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999998 89999999999999999999999999888776644 21 1 12344454433332 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 84 g~iDilvnnAG~ 95 (272)
T d1xkqa_ 84 GKIDVLVNNAGA 95 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeCCcc
Confidence 589999999886
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.14 E-value=1.2e-05 Score=53.16 Aligned_cols=87 Identities=21% Similarity=0.184 Sum_probs=63.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|.|+|+|.+|...++.++..|.+|++.++++++.+.+++ .| .+...+. . +.....|++|-|+... .....
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~-~~~~~~~~~~--~----~~~~~~DiIilavp~~-~~~~v 73 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQD--L----SLLQTAKIIFLCTPIQ-LILPT 73 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEESC--G----GGGTTCSEEEECSCHH-HHHHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH-hhccceeeee--c----ccccccccccccCcHh-hhhhh
Confidence 6889999999999999999999999999999999998888 67 3433221 1 2345889999999765 23444
Q ss_pred H----HhhhcCCEEEEeCCC
Q 030694 124 I----GLLKSQGKLVLLGAP 139 (173)
Q Consensus 124 ~----~~l~~~G~~v~~g~~ 139 (173)
+ ..+.++..++.++..
T Consensus 74 l~~l~~~l~~~~iv~~~~s~ 93 (165)
T d2f1ka2 74 LEKLIPHLSPTAIVTDVASV 93 (165)
T ss_dssp HHHHGGGSCTTCEEEECCSC
T ss_pred hhhhhhhcccccceeecccc
Confidence 4 444556666666544
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=98.14 E-value=1.6e-06 Score=61.62 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=67.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---C-CC--EEeeCCChHHHHHh-cCCcc
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---G-AD--SFLVSRDQDEMQAA-MGTMD 108 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g-~~--~v~~~~~~~~~~~~-~~~~d 108 (173)
..+++|++||-+|+| .|.++..+++..| .+|+.++.+++..+.+++++ + .. .+...+-.+ .+ ...+|
T Consensus 81 l~i~pG~rVLEiG~G-sG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~---~~~~~~fD 156 (250)
T d1yb2a1 81 CGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYD 156 (250)
T ss_dssp CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEE
T ss_pred cCCCCcCEEEEeeee-CcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec---ccccceee
Confidence 445999999999987 3666677777654 48999999999988888754 2 11 122221111 12 23799
Q ss_pred EEEEcCCCc-cchHHHHHhhhcCCEEEEeC
Q 030694 109 GIIDTVSAV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 109 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
.++-.++.+ ..++.+.+.|+|||+++.+.
T Consensus 157 ~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~ 186 (250)
T d1yb2a1 157 AVIADIPDPWNHVQKIASMMKPGSVATFYL 186 (250)
T ss_dssp EEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred eeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence 998666655 46789999999999999874
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.14 E-value=1.9e-05 Score=56.11 Aligned_cols=100 Identities=14% Similarity=0.107 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCCCE----EeeCC-ChHHHHH-------hcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS----FLVSR-DQDEMQA-------AMG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~----v~~~~-~~~~~~~-------~~~ 105 (173)
+|++++|.|+ +++|+..+......|++|+++.++.++.+.+.+ ..+... ..|-. +.+..++ ..+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 5899999998 899999999999999999999887766544433 233222 22322 2222222 235
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhh-----cCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~ 141 (173)
++|+++++.|... ....+++.|. ++|+++.+++..+
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~ 141 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence 8999999999752 2334555553 3588998876544
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.13 E-value=4.6e-06 Score=60.58 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=73.5
Q ss_pred hhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EE-eeCCCh
Q 030694 23 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SF-LVSRDQ 97 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v-~~~~~~ 97 (173)
|..+-..-+..+.....+++|++||=+|+| .|..+..+++..|++|++++.++++.+.+++. .|.. .+ +...+.
T Consensus 42 L~~Aq~~k~~~~~~~l~l~~G~~VLDiGCG-~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~ 120 (291)
T d1kpia_ 42 LEEAQYAKRKLALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW 120 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEecCc-chHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc
Confidence 333333334455555667999999999997 45567788888999999999999987776553 3421 11 111221
Q ss_pred HHHHHhcCCccEEE-----EcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 98 DEMQAAMGTMDGII-----DTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 98 ~~~~~~~~~~d~vi-----d~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
....+.+|.|+ +.++.+ ..+..+.+.|+|||+++.-.
T Consensus 121 ---~~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 121 ---EEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp ---GGCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ---cccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 12345899885 344431 24667889999999988643
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.13 E-value=2.5e-05 Score=55.86 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=69.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHH---HcCCCEE---eeCCChHHHHH-------hcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVE---RLGADSF---LVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~---~~g~~~v---~~~~~~~~~~~-------~~~~ 106 (173)
+|++++|.|+ +++|.+.++.+...|++|++.+++.+ +.+.+.+ +.|.+.. .|-.+.+.+++ ..++
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5899999998 99999999999999999999987644 3343332 2454332 23344333222 2358
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+++.+.|... ..+.++..|.++|+++.+++..
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~ 155 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 155 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence 999999998741 2456778888899988887543
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=98.13 E-value=9.6e-06 Score=54.25 Aligned_cols=104 Identities=19% Similarity=0.161 Sum_probs=68.0
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++.......++++|+|+|+|+.+.+++..+...+.+++++.|+.++.+.+.+.++.. .+.... .+ ......+|++
T Consensus 7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~-~~--~~~~~~~dii 83 (171)
T d1p77a1 7 TDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVS-MD--SIPLQTYDLV 83 (171)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEE-GG--GCCCSCCSEE
T ss_pred HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhh-hc--ccccccccee
Confidence 3455444446899999999999999998888877779999999999988887766521 111111 01 1123479999
Q ss_pred EEcCCCccc---hHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVSAVHP---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~~~---~~~~~~~l~~~G~~v~~g~ 138 (173)
|+|++.... .......++++..++.+-.
T Consensus 84 IN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy 114 (171)
T d1p77a1 84 INATSAGLSGGTASVDAEILKLGSAFYDMQY 114 (171)
T ss_dssp EECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred eecccccccccccchhhhhhcccceeeeeec
Confidence 999986411 1112344566777776643
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.11 E-value=3.7e-06 Score=59.30 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=67.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-------cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~~~d~vid~ 113 (173)
+|+++||.|+ +++|++.++.+...|++|+++++++++.+.+. ....|-.+.+.++++ .+++|+++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 6899999998 89999999999999999999999887654321 123455555433332 2589999999
Q ss_pred CCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 114 VSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 114 ~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
.|... ..+.++..|+ .+|+++.+++..+
T Consensus 81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~ 135 (237)
T d1uzma1 81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG 135 (237)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh
Confidence 98641 1234455553 4469999987654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.11 E-value=5.4e-07 Score=63.60 Aligned_cols=94 Identities=22% Similarity=0.209 Sum_probs=63.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCC--hHHH-------HHhc--CCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD--QDEM-------QAAM--GTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~-------~~~~--~~~d~ 109 (173)
+|+++||.|+ +++|+..++.....|++|+.+++++++.. .....+.... .+.. .+.. +++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 4899999998 99999999999999999999988765321 1111111111 1111 1111 26999
Q ss_pred EEEcCCCc--------------------------cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++++.|.- .....+++.|+++|+++.+++..+
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 132 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA 132 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence 99999852 023356677889999999986543
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=98.11 E-value=4.5e-07 Score=58.31 Aligned_cols=46 Identities=17% Similarity=0.240 Sum_probs=40.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEE
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 49 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~ 49 (173)
.+++++++++|+++|++++|.+++.+.|||+++.+.+ +.|++||++
T Consensus 86 ~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 86 AVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp EEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred eeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 5788999999999999999999999999999997765 459998873
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=7.7e-06 Score=49.08 Aligned_cols=83 Identities=23% Similarity=0.260 Sum_probs=55.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
+|++|+|+|.|.+|+++++++...|++|++++.++. ..+.+++ +....+........ .++|.++-+-|.+.
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~d~vi~SPGi~~- 76 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSLNDEWL----MAADLIVASPGIAL- 76 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBCCHHHH----HHCSEEEECTTSCT-
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeecccchhhh----ccCCEEEECCCCCC-
Confidence 578999999999999999999999999999998654 2222222 23333333333322 36799998888773
Q ss_pred hHHHHHhhhcCC
Q 030694 120 LMPLIGLLKSQG 131 (173)
Q Consensus 120 ~~~~~~~l~~~G 131 (173)
-...+...+..|
T Consensus 77 ~~~~~~~a~~~g 88 (93)
T d2jfga1 77 AHPSLSAAADAG 88 (93)
T ss_dssp TSHHHHHHHHTT
T ss_pred CCHHHHHHHHcC
Confidence 334444444433
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.10 E-value=2.8e-06 Score=61.45 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=70.2
Q ss_pred HHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CEE-eeCCChHHHHHhc
Q 030694 30 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DSF-LVSRDQDEMQAAM 104 (173)
Q Consensus 30 a~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v-~~~~~~~~~~~~~ 104 (173)
-+..+.....+++|++||-+|+| .|..+..+++..|++|++++.+++..+.+++.. |. ..+ +...+ ..+..
T Consensus 40 k~~~~~~~l~l~~g~~VLDiGCG-~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d---~~~~~ 115 (280)
T d2fk8a1 40 KVDLNLDKLDLKPGMTLLDIGCG-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG---WEDFA 115 (280)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC---GGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEecCC-chHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhh---hhhhc
Confidence 34455555667999999999997 344567788888999999999999988887743 31 111 11111 12334
Q ss_pred CCccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEe
Q 030694 105 GTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 105 ~~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+|.++ +.++.+ ..+..+.+.|+|||+++.-
T Consensus 116 ~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 116 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 155 (280)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred cchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence 5789885 344433 2366788999999998864
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.09 E-value=7.1e-06 Score=59.72 Aligned_cols=77 Identities=21% Similarity=0.271 Sum_probs=57.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--------CCCE---EeeCCChHHHHHh-----
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------GADS---FLVSRDQDEMQAA----- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~----- 103 (173)
-+|++++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ +... ..|-++.+.+++.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 47899999998 89999999999999999999999998877665433 2221 2344444433332
Q ss_pred --cCCccEEEEcCCCc
Q 030694 104 --MGTMDGIIDTVSAV 117 (173)
Q Consensus 104 --~~~~d~vid~~g~~ 117 (173)
.+++|+++++.|..
T Consensus 90 ~~~G~iDiLVnnAg~~ 105 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQ 105 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCeEEEEeecccc
Confidence 35899999999864
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.07 E-value=1.7e-05 Score=56.25 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=54.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+||.|+ +++|+..++.+...|++|+++++++++++.+.+++ |.+. ..|-.+.+.+++. .+++|++
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 82 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 4588898 89999999999999999999999999887765543 4332 2344444433332 3589999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+++.|..
T Consensus 83 VnnAG~~ 89 (255)
T d1gega_ 83 VNNAGVA 89 (255)
T ss_dssp EECCCCC
T ss_pred Eeccccc
Confidence 9999864
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.07 E-value=4.2e-06 Score=59.72 Aligned_cols=76 Identities=22% Similarity=0.341 Sum_probs=56.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
+|+++||.|+ +++|+..++.+...|++|+++++++++++.+.++ .|.+. ..|-++.+.+++. .++
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999998 8999999999999999999999998887655443 45332 2344454433332 358
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|+++++.|..
T Consensus 88 iDilVnnAg~~ 98 (260)
T d1h5qa_ 88 ISGLIANAGVS 98 (260)
T ss_dssp EEEEEECCCCC
T ss_pred CcEeccccccc
Confidence 99999999863
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.07 E-value=2.8e-06 Score=60.46 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=67.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEEeeCCCh-HHHHH---hcCCccEEEEcCCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVSRDQ-DEMQA---AMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~-~~~~~---~~~~~d~vid~~g~ 116 (173)
+.||.|+ +++|+..++.+...|++|++.+++.+++++++.. +..-.+.+..+. +..++ ..+++|+++++.|.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 6889998 8999999999999999999999998888877662 223334444432 22222 23689999988774
Q ss_pred c-c-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 117 V-H-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 117 ~-~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
. . ..+.++..|+ .+|+++.+++..+
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~ 134 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP 134 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence 2 0 1235556663 4699999987654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.06 E-value=1.5e-05 Score=56.19 Aligned_cols=96 Identities=13% Similarity=0.198 Sum_probs=68.3
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCe-------EEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH-------hc
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVK-------VTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AM 104 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~-------v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~ 104 (173)
+||.|+ +++|++.++.+...|++ |+..++++++++.+.+++ |... ..|-++.+.+++ ..
T Consensus 4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY 83 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678898 89999999999999987 899999998887776544 3221 234455443333 23
Q ss_pred CCccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+++|+++++.|... ..+.+++.|+ ++|+++.+++..+
T Consensus 84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 147 (240)
T d2bd0a1 84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA 147 (240)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence 58999999998741 2446667774 4689999986554
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.06 E-value=6.3e-06 Score=58.08 Aligned_cols=103 Identities=23% Similarity=0.230 Sum_probs=70.2
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC-C--EEeeCCChHHHHHhc
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA-D--SFLVSRDQDEMQAAM 104 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~-~--~v~~~~~~~~~~~~~ 104 (173)
+..+.....+++|++||=+|+| .|..+..+++..|++|++++.+++..+.+++. .|. + .++..+..+. ...
T Consensus 22 ~~~l~~~~~l~pg~~VLDiGCG-~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~--~~~ 98 (245)
T d1nkva_ 22 YATLGRVLRMKPGTRILDLGSG-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY--VAN 98 (245)
T ss_dssp HHHHHHHTCCCTTCEEEEETCT-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC--CCS
T ss_pred HHHHHHHcCCCCCCEEEEEcCC-CCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc--ccc
Confidence 4456677778999999999987 35566778888899999999999887776663 342 1 2222222221 123
Q ss_pred CCccEEEEcCCC------ccchHHHHHhhhcCCEEEEe
Q 030694 105 GTMDGIIDTVSA------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 105 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+|.|+..-.. ...+..+.+.|+|||+++..
T Consensus 99 ~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 99 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred CceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 479998754322 13466788999999998875
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.05 E-value=1e-05 Score=57.82 Aligned_cols=102 Identities=22% Similarity=0.237 Sum_probs=70.9
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcC------C-CEEeeCCChHHHHHhcC
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLG------A-DSFLVSRDQDEMQAAMG 105 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g------~-~~v~~~~~~~~~~~~~~ 105 (173)
.....+++|++||-.|+| .|.++..+++..|. +|+.++.+++..+.+++++. . ...+...+........+
T Consensus 89 i~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~ 167 (264)
T d1i9ga_ 89 VHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDG 167 (264)
T ss_dssp HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTT
T ss_pred HHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccCC
Confidence 344555999999999987 57778888888764 89999999999888876321 1 11122222111111123
Q ss_pred CccEEEEcCCCc-cchHHHHHhhhcCCEEEEeC
Q 030694 106 TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 106 ~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
.+|.||--++.+ ..+..+.+.|+|||+++.+.
T Consensus 168 ~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~ 200 (264)
T d1i9ga_ 168 SVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV 200 (264)
T ss_dssp CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence 799888777765 46778999999999998875
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.05 E-value=6e-06 Score=59.03 Aligned_cols=75 Identities=16% Similarity=0.282 Sum_probs=56.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C----EEeeCCChHHHHHh-------c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D----SFLVSRDQDEMQAA-------M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~v~~~~~~~~~~~~-------~ 104 (173)
+|+.++|.|+ +++|++.++.+...|++|+++++++++++.+.+++ +. . ...|-.+.+.++++ .
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5889999998 89999999999999999999999999887776543 21 1 12344454433332 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 84 g~iDilvnnAG~ 95 (264)
T d1spxa_ 84 GKLDILVNNAGA 95 (264)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEeeccccc
Confidence 589999999885
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.05 E-value=1.1e-05 Score=57.44 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=69.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHH---cCCCEE---eeCCChHHHHH-------hcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVER---LGADSF---LVSRDQDEMQA-------AMG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~---~g~~~v---~~~~~~~~~~~-------~~~ 105 (173)
-.|+++||.|+ +++|...++.+...|++|++..++ +++.+.+.++ .|.+.. .|-.+.+.+++ ..+
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 35899999998 899999999999999999987654 4444444332 454332 24344333222 235
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|+++++.|... ..+.++..|+++|.++.+.+..
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~ 143 (259)
T d1ja9a_ 84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA 143 (259)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence 8999999999751 2456778888888888776543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.04 E-value=3.8e-05 Score=50.89 Aligned_cols=93 Identities=22% Similarity=0.174 Sum_probs=67.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
++|+|+|+|.+|...+..++..|. +|++++++++.++.+++ .+. +....... . ......|+++-|+....
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~~~-~---~~~~~~dlIila~p~~~~~ 76 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIA-K---VEDFSPDFVMLSSPVRTFR 76 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCGG-G---GGGTCCSEEEECSCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhhhh-h---hhccccccccccCCchhhh
Confidence 479999999999999999998885 89999999999999999 773 44332211 1 12336899999998653
Q ss_pred -chHHHHHhhhcCCEEEEeCCCCC
Q 030694 119 -PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 119 -~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+......+.++..++.++....
T Consensus 77 ~vl~~l~~~~~~~~ii~d~~s~k~ 100 (171)
T d2g5ca2 77 EIAKKLSYILSEDATVTDQGSVKG 100 (171)
T ss_dssp HHHHHHHHHSCTTCEEEECCSCCT
T ss_pred hhhhhhhccccccccccccccccH
Confidence 23345566777778888876544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.02 E-value=1.1e-05 Score=58.47 Aligned_cols=76 Identities=20% Similarity=0.250 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCE-E--eeCCChHHHHH-------hcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADS-F--LVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~-------~~~~ 106 (173)
+|+++||.|+ +++|.+.++.+...|++|+++++++++++.+.++ .|... . .|-.+.+.++. ..++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 103 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 103 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence 5799999998 9999999999999999999999998876655443 34332 2 23344433322 2358
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|+++++.|..
T Consensus 104 iDilvnnAg~~ 114 (294)
T d1w6ua_ 104 PNIVINNAAGN 114 (294)
T ss_dssp CSEEEECCCCC
T ss_pred cchhhhhhhhc
Confidence 99999999874
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.02 E-value=1.1e-05 Score=57.41 Aligned_cols=75 Identities=19% Similarity=0.263 Sum_probs=56.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
|+.+||.|+ +++|++.++.+...|++|+++++++++++.+.+++ |... ..|-++.+.++++ .+++|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 677899998 89999999999999999999999998877765543 4332 2344454433332 35899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
+++++.|..
T Consensus 82 ilVnnAG~~ 90 (257)
T d2rhca1 82 VLVNNAGRP 90 (257)
T ss_dssp EEEECCCCC
T ss_pred EEEeccccc
Confidence 999999874
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=98.00 E-value=1e-05 Score=58.00 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=70.5
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHH---cCC-C-EEeeCCChHHHHHhc-CCc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LGA-D-SFLVSRDQDEMQAAM-GTM 107 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~---~g~-~-~v~~~~~~~~~~~~~-~~~ 107 (173)
....+++|++||-+|+|. |..+..+++..| .+|+.++.+++..+.++++ +|. + ..+...+. ..... ..+
T Consensus 97 ~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~--~~~~~~~~~ 173 (266)
T d1o54a_ 97 MMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI--SEGFDEKDV 173 (266)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG--GGCCSCCSE
T ss_pred HhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccc--cccccccce
Confidence 444559999999999874 677778888765 5999999999988888774 332 1 12222221 11111 368
Q ss_pred cEEEEcCCCc-cchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
|.++--++.+ ..++.+.+.|+|||+++.+.
T Consensus 174 D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~ 204 (266)
T d1o54a_ 174 DALFLDVPDPWNYIDKCWEALKGGGRFATVC 204 (266)
T ss_dssp EEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred eeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence 9888777776 46789999999999998765
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.98 E-value=7.9e-07 Score=62.61 Aligned_cols=93 Identities=23% Similarity=0.274 Sum_probs=62.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCC--hH-------HHHHh--cCCccEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD--QD-------EMQAA--MGTMDGI 110 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~-------~~~~~--~~~~d~v 110 (173)
+.+|||.|+ +++|++.++.+...|++|+++++++++... ....+.... .+ ..... .+++|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 457899998 999999999999999999999998764211 111111111 11 11111 2479999
Q ss_pred EEcCCCc--------------------------cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAV--------------------------HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|++.|.. ......+..|+++|+++.+++..+
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~ 132 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA 132 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence 9999852 013456678889999999986543
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.95 E-value=2.3e-05 Score=51.69 Aligned_cols=89 Identities=21% Similarity=0.263 Sum_probs=65.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH--
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP-- 122 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 122 (173)
+|-++|.|.+|...++-+...|++|++.++++++.+.+.+ .+.. +.+ . ..+.....|++|-|++.+.....
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~-~~~--~---~~e~~~~~d~ii~~v~~~~~v~~v~ 74 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAE-TAS--T---AKAIAEQCDVIITMLPNSPHVKEVA 74 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECS--S---HHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-hhhh-hcc--c---HHHHHhCCCeEEEEcCCHHHHHHHH
Confidence 5889999999999999888899999999999999999988 6653 221 1 12233468999999987644443
Q ss_pred -----HHHhhhcCCEEEEeCCCC
Q 030694 123 -----LIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 123 -----~~~~l~~~G~~v~~g~~~ 140 (173)
.+..++++..++.++...
T Consensus 75 ~~~~~~~~~~~~g~iiid~sT~~ 97 (161)
T d1vpda2 75 LGENGIIEGAKPGTVLIDMSSIA 97 (161)
T ss_dssp HSTTCHHHHCCTTCEEEECSCCC
T ss_pred hCCcchhhccCCCCEEEECCCCC
Confidence 344566777777777554
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.93 E-value=3.1e-05 Score=54.57 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=65.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
.+||.|+ +++|+..++.+...|++|++.+ +++++.+.+.++ .|.+. ..|-.+.+.++++ .+++|+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 4678898 8999999999999999998875 455555555442 44322 2344454433332 358999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 141 (173)
++++.|... ..+.+++.| +++|+++.+++..+
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 141 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG 141 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence 999998741 244566666 46799999986543
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=97.90 E-value=2.2e-05 Score=56.42 Aligned_cols=102 Identities=16% Similarity=0.212 Sum_probs=68.3
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC--C-EEeeCCChHHHHHhcCCc
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA--D-SFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~--~-~v~~~~~~~~~~~~~~~~ 107 (173)
+.....++++.+||=+|+| .|..+..+++..|++|++++.++...+.+++. .|. . .++..+..+ +....+.+
T Consensus 59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~-l~~~~~sf 136 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE-IPCEDNSY 136 (282)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS-CSSCTTCE
T ss_pred HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccc-cccccccc
Confidence 4455667999999999997 46667778887899999999999887777663 232 1 222222111 11112479
Q ss_pred cEEEEcCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+..-.-. ..+..+.+.|+|||+++...
T Consensus 137 D~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~ 172 (282)
T d2o57a1 137 DFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD 172 (282)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence 9997543321 24668889999999988764
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.88 E-value=1.6e-05 Score=50.75 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=64.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-cCCccEEEEcCCCccchH-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLM- 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~- 121 (173)
+++|+|.|.+|..+++.+...|.+|++++.++++.+.+++ .+... +-|..+.+.+.+. ....|.++-+++......
T Consensus 2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~~ 80 (134)
T d2hmva1 2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST 80 (134)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-TCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-hCCcceeeecccchhhhccCCccccEEEEEcCchHHhHH
Confidence 5788899999999999999999999999999999999887 66433 3344445555544 347899998888763222
Q ss_pred --HHHHhhhcCCEEEEe
Q 030694 122 --PLIGLLKSQGKLVLL 136 (173)
Q Consensus 122 --~~~~~l~~~G~~v~~ 136 (173)
.....+.+..+++.-
T Consensus 81 ~~~~~~~~~~~~~iiar 97 (134)
T d2hmva1 81 LTTLLLKELDIPNIWVK 97 (134)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCcEEee
Confidence 222333344565544
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.87 E-value=3.6e-05 Score=50.29 Aligned_cols=86 Identities=15% Similarity=0.257 Sum_probs=66.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
++.++|+|.+|.+.+.-....|.++++..++.++.+.+.+.+|....- + .++...+.|++|-|+... .+...+
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~---~---~~~~~~~~dvIilavkp~-~~~~vl 74 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM---S---HQDLIDQVDLVILGIKPQ-LFETVL 74 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS---S---HHHHHHTCSEEEECSCGG-GHHHHH
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec---h---hhhhhhccceeeeecchH-hHHHHh
Confidence 578999999999988877778889999999999988887768854321 1 223344799999999754 678888
Q ss_pred HhhhcCCEEEEeC
Q 030694 125 GLLKSQGKLVLLG 137 (173)
Q Consensus 125 ~~l~~~G~~v~~g 137 (173)
..++++..++.+.
T Consensus 75 ~~l~~~~~iis~~ 87 (152)
T d2ahra2 75 KPLHFKQPIISMA 87 (152)
T ss_dssp TTSCCCSCEEECC
T ss_pred hhcccceeEeccc
Confidence 8888888777664
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.86 E-value=0.00016 Score=48.19 Aligned_cols=96 Identities=21% Similarity=0.238 Sum_probs=64.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.+|-++|.|.+|..++.-+...|++|+++++++++.+.+.+ .+.. ....-...+...+.....|.++-++.....
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-NEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-TTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-hccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 56889999999999999999999999999999999998877 4421 111112233333445567777777766432
Q ss_pred --hHHHHHhhhcCCEEEEeCCCC
Q 030694 120 --LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 --~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...+...++++..++.++...
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT~~ 104 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGNSE 104 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHHhccccCcEEEecCcch
Confidence 234445556666666666443
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=97.82 E-value=1.7e-05 Score=55.36 Aligned_cols=101 Identities=17% Similarity=0.193 Sum_probs=66.2
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCc
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~ 107 (173)
.+.....+++|++||-+|+| .|..+..+++ .+.+|++++.+++.++.+++. .+.+ .++..+..+ ..-..+.+
T Consensus 7 ~l~~~~~~~~~~rILDiGcG-tG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~-~~~~~~~f 83 (234)
T d1xxla_ 7 LMIKTAECRAEHRVLDIGAG-AGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES-LPFPDDSF 83 (234)
T ss_dssp HHHHHHTCCTTCEEEEESCT-TSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB-CCSCTTCE
T ss_pred HHHHHhCCCCCCEEEEeCCc-CcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhccccccccccccccccc-cccccccc
Confidence 34455566999999999997 4666666666 568999999999877777653 2322 122111111 10012479
Q ss_pred cEEEEcCCCc------cchHHHHHhhhcCCEEEEe
Q 030694 108 DGIIDTVSAV------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 108 d~vid~~g~~------~~~~~~~~~l~~~G~~v~~ 136 (173)
|+|+.+..-. ..+..+.+.|+|||+++..
T Consensus 84 D~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~ 118 (234)
T d1xxla_ 84 DIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV 118 (234)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence 9998654432 2466888999999998875
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=2.3e-05 Score=54.63 Aligned_cols=97 Identities=20% Similarity=0.064 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe----------------------eCCC
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL----------------------VSRD 96 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~----------------------~~~~ 96 (173)
...++.+||..|+|. |..+..+++ .|++|++++-+++-.+.+++..+..... ..+.
T Consensus 42 ~~~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 119 (229)
T d2bzga1 42 KGKSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI 119 (229)
T ss_dssp TTCCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred CCCCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence 347889999999973 677777765 7999999999999888888755532211 0000
Q ss_pred hHHHHHhcCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEEeC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
.+......+.+|+++++.--. ..+..+.++|+|||+++...
T Consensus 120 ~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~ 168 (229)
T d2bzga1 120 FDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV 168 (229)
T ss_dssp GGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence 111111224789999876532 23457889999999876664
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.80 E-value=7.9e-05 Score=48.51 Aligned_cols=83 Identities=18% Similarity=0.284 Sum_probs=58.6
Q ss_pred EEEEEcCChHHHHHHH-HHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVK-FAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~-~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|.++|+|.+|.+.++ +.+..+.+++++++++++.+.+.+++|.... +.. + .....|++|=|+... .+...
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~--~----~v~~~Div~lavkP~-~~~~v 73 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATL--P----ELHSDDVLILAVKPQ-DMEAA 73 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSC--C----CCCTTSEEEECSCHH-HHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccc--c----cccccceEEEecCHH-HHHHh
Confidence 6889999999998777 4454447999999999999998886775432 211 1 123578999888743 46777
Q ss_pred HHhhhcCCEEEE
Q 030694 124 IGLLKSQGKLVL 135 (173)
Q Consensus 124 ~~~l~~~G~~v~ 135 (173)
++.+++.+.++.
T Consensus 74 ~~~l~~~~~~vi 85 (152)
T d1yqga2 74 CKNIRTNGALVL 85 (152)
T ss_dssp HTTCCCTTCEEE
T ss_pred HHHHhhcccEEe
Confidence 777776665443
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=5e-05 Score=55.72 Aligned_cols=99 Identities=19% Similarity=0.160 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcC--------------CC--EEeeCCChHH
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLG--------------AD--SFLVSRDQDE 99 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g--------------~~--~v~~~~~~~~ 99 (173)
..+++|++||=.|+| .|.++..+++..|. +|+.++.+++..+.+++++- .+ .+.+.+-.+.
T Consensus 94 l~i~pG~rVLE~GtG-sG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~ 172 (324)
T d2b25a1 94 MDINPGDTVLEAGSG-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 172 (324)
T ss_dssp HTCCTTCEEEEECCT-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred hCCCCCCEEEEeccc-ccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhc
Confidence 345999999999987 47788888888764 89999999998888776431 01 1222221111
Q ss_pred HHHh-cCCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeC
Q 030694 100 MQAA-MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 100 ~~~~-~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
...+ ...+|.||--++.+ ..++.+.+.|+|||+++.+.
T Consensus 173 ~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 173 TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp C-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred ccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 1111 23688887555554 36889999999999998764
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.78 E-value=7.5e-06 Score=55.03 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=54.4
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CCEE--eeCCChHHHHHhc
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADSF--LVSRDQDEMQAAM 104 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~v--~~~~~~~~~~~~~ 104 (173)
..++.....--++++|+|+|+|+++.+++..+...| +|+++.|+.+|.+.+.+.+. .... ++.. ......
T Consensus 6 ~~~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~---~~~~~~ 81 (177)
T d1nvta1 6 RMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS---GLDVDL 81 (177)
T ss_dssp HHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE---CTTCCC
T ss_pred HHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhh---hhhhcc
Confidence 344544444368899999999999998887776555 99999999998877765443 1110 0100 011122
Q ss_pred CCccEEEEcCCCc
Q 030694 105 GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ~~~d~vid~~g~~ 117 (173)
..+|++++|++..
T Consensus 82 ~~~dliIn~tp~g 94 (177)
T d1nvta1 82 DGVDIIINATPIG 94 (177)
T ss_dssp TTCCEEEECSCTT
T ss_pred chhhhhccCCccc
Confidence 3789999998864
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.78 E-value=3e-05 Score=54.73 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=53.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH----h---cC--Cc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MG--TM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~--~~ 107 (173)
.++|||.|+ +++|+..++.+...|+ +|+.++|++++++.+++..+... ..|-.+.+.+++ + .+ ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 478999998 8999999998888886 68889999999998887444321 234444332222 2 12 59
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++++.|.
T Consensus 83 dilinnAG~ 91 (250)
T d1yo6a1 83 SLLINNAGV 91 (250)
T ss_dssp CEEEECCCC
T ss_pred EEEEEcCcc
Confidence 999999995
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.78 E-value=0.00011 Score=49.43 Aligned_cols=96 Identities=21% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC-C--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA-D--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~-~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.++++++||=+|+| .|..+..+++ .+.+|++++.+++..+.++++ +|. + .++.. +..........+|.++.
T Consensus 30 ~~~~g~~VLDiGcG-sG~~s~~lA~-~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~~~~~D~v~~ 106 (186)
T d1l3ia_ 30 EPGKNDVAVDVGCG-TGGVTLELAG-RVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKIPDIDIAVV 106 (186)
T ss_dssp CCCTTCEEEEESCT-TSHHHHHHHT-TSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTSCCEEEEEE
T ss_pred CCCCCCEEEEEECC-eEcccccccc-cceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccccCCcCEEEE
Confidence 44899999999986 3444555555 456999999999988888774 342 2 23332 22222122348999986
Q ss_pred cCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..+.. ..++.+.+.|+|+|+++...
T Consensus 107 ~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 134 (186)
T d1l3ia_ 107 GGSGGELQEILRIIKDKLKPGGRIIVTA 134 (186)
T ss_dssp SCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eCccccchHHHHHHHHHhCcCCEEEEEe
Confidence 55443 24567788999999988765
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.78 E-value=8.6e-05 Score=52.13 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=43.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD 89 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~ 89 (173)
+|+.++|.|+ +++|.+.++.+...|++|+++++++++++.+.++++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence 6899999998 89999999999999999999999999998888878754
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=97.77 E-value=1.6e-05 Score=55.46 Aligned_cols=92 Identities=17% Similarity=0.257 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC----
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---- 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---- 116 (173)
+++.+||-+|+| .|..+..+++ .|++|++++.+++..+.+++ .+....+..+..+ +....+.+|+|+.....
T Consensus 41 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~-~~~~~~~~~~~~~-l~~~~~~fD~ii~~~~~~~~~ 116 (246)
T d2avna1 41 KNPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVARE-KGVKNVVEAKAED-LPFPSGAFEAVLALGDVLSYV 116 (246)
T ss_dssp CSCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHH-HTCSCEEECCTTS-CCSCTTCEEEEEECSSHHHHC
T ss_pred CCCCEEEEECCC-Cchhcccccc-cceEEEEeeccccccccccc-ccccccccccccc-cccccccccceeeecchhhhh
Confidence 578899999998 6777877776 68999999999999999998 5544444433322 11113479999865432
Q ss_pred --c-cchHHHHHhhhcCCEEEEe
Q 030694 117 --V-HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 117 --~-~~~~~~~~~l~~~G~~v~~ 136 (173)
+ ..+..+.+.|+|||.++..
T Consensus 117 ~d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 117 ENKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHhhcCcCcEEEEE
Confidence 1 2356778899999988764
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.76 E-value=0.00015 Score=47.68 Aligned_cols=90 Identities=18% Similarity=0.213 Sum_probs=62.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH-
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP- 122 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~- 122 (173)
++|-++|.|.+|...++-+...|++|++.+++.++.+.+.. .+.... . ...+.....|+++-|+........
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~~~---~---~~~e~~~~~diii~~v~~~~~~~~v 74 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-AGASAA---R---SARDAVQGADVVISMLPASQHVEGL 74 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCEEC---S---SHHHHHTSCSEEEECCSCHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-hhcccc---c---hhhhhccccCeeeecccchhhHHHH
Confidence 46899999999999888888899999999999999888877 664322 1 122334467777777776643332
Q ss_pred ------HHHhhhcCCEEEEeCCCC
Q 030694 123 ------LIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 123 ------~~~~l~~~G~~v~~g~~~ 140 (173)
....+.++-.++.++...
T Consensus 75 ~~~~~~~~~~l~~g~iiid~st~~ 98 (162)
T d3cuma2 75 YLDDDGLLAHIAPGTLVLECSTIA 98 (162)
T ss_dssp HHSTTCHHHHSCTTCEEEECSCCC
T ss_pred HhccccccccCCCCCEEEECCCCC
Confidence 233455666666666544
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=2.1e-05 Score=54.92 Aligned_cols=103 Identities=22% Similarity=0.131 Sum_probs=66.2
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CC-EEeeCCChHHHHHhc-CCc
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD-SFLVSRDQDEMQAAM-GTM 107 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~-~~~ 107 (173)
.+..... .+|.+||-+|+| .|..+..+++..+.+|++++.+++-++.+++... .. ..+............ +.+
T Consensus 45 ~la~~~~-~~g~~VLdIGcG-~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (229)
T d1zx0a1 45 ALAAAAS-SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHF 122 (229)
T ss_dssp HHHHHHT-TTCEEEEEECCT-TSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCE
T ss_pred HHHHhhc-cCCCeEEEeecc-chHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 3333333 678999999987 5677777877666799999999999998888443 11 112211122222222 378
Q ss_pred cEEE-EcCCCcc----------chHHHHHhhhcCCEEEEeC
Q 030694 108 DGII-DTVSAVH----------PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vi-d~~g~~~----------~~~~~~~~l~~~G~~v~~g 137 (173)
|.++ |.+.... .+..+.+.|+|||+++...
T Consensus 123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 8884 6555431 2445778999999998753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=97.67 E-value=0.00019 Score=47.25 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=73.9
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
.-+||+....+..+..+...-.|++++|+|. ..+|.-++.++...|++|+...+....+....
T Consensus 15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~---------------- 78 (166)
T d1b0aa1 15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV---------------- 78 (166)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH----------------
T ss_pred CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH----------------
Confidence 4678888888888888887778999999998 67999999999999999988876544332221
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
...|+++-++|.+..+.. ..++++..++.+|..
T Consensus 79 -----~~ADivI~a~G~p~~i~~--~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 79 -----ENADLLIVAVGKPGFIPG--DWIKEGAIVIDVGIN 111 (166)
T ss_dssp -----HHCSEEEECSCCTTCBCT--TTSCTTCEEEECCCE
T ss_pred -----hhhhHhhhhccCcccccc--cccCCCcEEEecCce
Confidence 246888889998865543 357888889998853
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.67 E-value=1.5e-08 Score=67.78 Aligned_cols=51 Identities=10% Similarity=-0.060 Sum_probs=41.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-Ch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GG 53 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~ 53 (173)
++|+++++++|+++|+++||++++.++|||.++..... ..+++|||.|+ |+
T Consensus 106 ~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~-~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 106 SVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETP-GALKDILQNRIQGR 157 (162)
T ss_dssp EECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHH-HHHHHTTTTCCSSE
T ss_pred EecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEECCcce
Confidence 57899999999999999999999999999977654322 44567777776 54
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.67 E-value=0.00011 Score=49.30 Aligned_cols=84 Identities=23% Similarity=0.375 Sum_probs=63.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...+++++..|++|++.++...+ +..... +.++++....|+++.+++...
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~-----~~l~ell~~sDiv~~~~pl~~~t~ 107 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT-----NSLEEALREARAAVCALPLNKHTR 107 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB-----SCSHHHHTTCSEEEECCCCSTTTT
T ss_pred cCceEEEeccccccccceeeeeccccccccccccccc--------cceeee-----echhhhhhccchhhcccccccccc
Confidence 5889999999999999999999999999999987542 111111 123456678999998886531
Q ss_pred --chHHHHHhhhcCCEEEEeCC
Q 030694 119 --PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~~~~~~~l~~~G~~v~~g~ 138 (173)
.-...+..|+++..+|.+|.
T Consensus 108 ~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 108 GLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred cccccceeeeccccceEEeccc
Confidence 12478889999999999873
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.66 E-value=4.6e-05 Score=52.35 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
++++.+||-+|+| .|..+..+++ .|.+|++++.+++..+.+++.. +. ...+..+..+ +......+|+|+..-.
T Consensus 35 l~~~~~ILDiGcG-~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~-l~~~~~~fD~I~~~~~ 111 (226)
T d1ve3a1 35 MKKRGKVLDLACG-VGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDS 111 (226)
T ss_dssp CCSCCEEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESC
T ss_pred cCCCCEEEEECCC-cchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccc-ccccCcCceEEEEecc
Confidence 3678899999997 3667777776 6889999999999888877632 31 2222221111 1111247999885544
Q ss_pred Cc--------cchHHHHHhhhcCCEEEEe
Q 030694 116 AV--------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 116 ~~--------~~~~~~~~~l~~~G~~v~~ 136 (173)
-. ..+..+.+.|+|||+++..
T Consensus 112 l~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 112 IVHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp GGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 32 1356788999999998754
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.64 E-value=5.2e-05 Score=52.89 Aligned_cols=98 Identities=22% Similarity=0.176 Sum_probs=67.3
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC---CCEEe--eCCChHHHHHhcCCccEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG---ADSFL--VSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g---~~~v~--~~~~~~~~~~~~~~~d~v 110 (173)
..+++|++||=+|+| .|..+..+++..| .+|++++.+++.++.+++... ....+ +.............+|++
T Consensus 69 l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i 147 (227)
T d1g8aa_ 69 FPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred cccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEE
Confidence 345999999999986 4667778888776 389999999999888877433 11112 222222222223478988
Q ss_pred EEcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 111 IDTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 111 id~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
+..+..+. .+..+.+.|++||+++.+
T Consensus 148 ~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 148 FEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence 87666442 356777899999988765
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.63 E-value=0.00011 Score=49.56 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=36.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
++|.|+|+|.+|...+.++...|++|++.+++++.++.+.+
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~ 45 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLA 45 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence 67999999999999999999999999999999887666544
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.00023 Score=47.63 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
...++|+|+|+|+.|+.++..+..+|.+|+++++.++
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCc
Confidence 5578999999999999999999999999999998753
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=9.3e-06 Score=53.58 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=58.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--CE---EeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DS---FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
+|+|+|+|.+|.+.+..+...|.+|+.+++++++.+.... .+. .. .+.....+ ..+.+|++|-++....
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~D~iii~vka~~- 75 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNL-VETDGSIFNESLTANDPD----FLATSDLLLVTLKAWQ- 75 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEE-ECTTSCEEEEEEEESCHH----HHHTCSEEEECSCGGG-
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhcc-ccCCccccccccccchhh----hhcccceEEEeecccc-
Confidence 6899999999999988888899999999998875543332 221 11 11112222 2237999999999874
Q ss_pred hHHHHHh----hhcCCEEEEeC
Q 030694 120 LMPLIGL----LKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~----l~~~G~~v~~g 137 (173)
....++. +.++..++.+.
T Consensus 76 ~~~~~~~l~~~~~~~~~Iv~~q 97 (167)
T d1ks9a2 76 VSDAVKSLASTLPVTTPILLIH 97 (167)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEC
T ss_pred hHHHHHhhccccCcccEEeecc
Confidence 4544444 44556676664
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.61 E-value=0.00016 Score=51.37 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchHHHH---HHHcCCCE--EeeCCChHHHHH-------hcC
Q 030694 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEA---VERLGADS--FLVSRDQDEMQA-------AMG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~---~~~~g~~~--v~~~~~~~~~~~-------~~~ 105 (173)
-+|+++||.|+ | ++|.+.++.+...|++|++++++++..+.+ .+..+... ..+-.+.+...+ ..+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 36899999996 5 799999999999999999999987533333 33233222 233333332222 235
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
++|+++.+.|..
T Consensus 83 ~id~lV~nag~~ 94 (274)
T d2pd4a1 83 SLDFIVHSVAFA 94 (274)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCeEEeecccc
Confidence 899999999864
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=97.61 E-value=3.7e-05 Score=53.24 Aligned_cols=99 Identities=20% Similarity=0.137 Sum_probs=64.8
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~v 110 (173)
....++++++||-+|+| .|..+..+++ .|++|++++.+++-.+.+++. .+.. .++..+..+. .-..+.+|+|
T Consensus 9 ~~~~l~~~~rVLDiGcG-~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l-~~~~~~fD~v 85 (231)
T d1vl5a_ 9 QIAALKGNEEVLDVATG-GGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-PFTDERFHIV 85 (231)
T ss_dssp HHHTCCSCCEEEEETCT-TCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-CSCTTCEEEE
T ss_pred HhcCCCCcCEEEEeccc-CcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccccc-cccccccccc
Confidence 33456999999999987 5666656654 578999999999877776553 3322 2222222211 1112479999
Q ss_pred EEcCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
+..-.-. ..+..+.+.|+|||+++...
T Consensus 86 ~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 118 (231)
T d1vl5a_ 86 TCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 118 (231)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 8654422 24678899999999988753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=97.60 E-value=0.00014 Score=49.53 Aligned_cols=87 Identities=22% Similarity=0.197 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|++|.|+|.|.+|..++++++..|++|++.++..+... .. .+.. .. .++++....|+++-+++...
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~-~~~~----~~---~l~~~l~~sDii~~~~plt~~T~ 111 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPEL--EK-KGYY----VD---SLDDLYKQADVISLHVPDVPANV 111 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH-TTCB----CS---CHHHHHHHCSEEEECSCCCGGGT
T ss_pred cCCeEEEecccccchhHHHhHhhhcccccccCccccccc--cc-ceee----ec---cccccccccccccccCCcccccc
Confidence 489999999999999999999999999999987654322 11 2211 11 23344456788888777431
Q ss_pred -c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 -P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -.+.+..|+++..+|.++.
T Consensus 112 ~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 112 HMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred ccccHHHHhhhCCccEEEecCc
Confidence 1 2367788888888888764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.59 E-value=0.00011 Score=50.42 Aligned_cols=72 Identities=24% Similarity=0.159 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
-.+|||.|+ |.+|..+++.+...|. .|+...|++++...+.. +.+. ..|..+.+...+...++|.++.+.+.
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEee
Confidence 368999998 9999999999998886 46666777765543322 2222 34555566666777799999999875
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.58 E-value=0.00022 Score=48.68 Aligned_cols=81 Identities=22% Similarity=0.244 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.|++|+|.|.|.+|..+++.+...|++|++.+.+.++...... +|.+.+ ... + -+.-++|+.+=|..+...-
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~~~-~~~--~---~~~~~~DI~iPcA~~~~I~ 97 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-ALE--D---VLSTPCDVFAPCAMGGVIT 97 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-CGG--G---GGGCCCSEEEECSCSCCBC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccccc-Ccc--c---cccccceeeeccccccccc
Confidence 47899999999999999999999999999999999998888887 776543 211 1 1233788888666554333
Q ss_pred HHHHHhhh
Q 030694 121 MPLIGLLK 128 (173)
Q Consensus 121 ~~~~~~l~ 128 (173)
....+.++
T Consensus 98 ~~~a~~i~ 105 (201)
T d1c1da1 98 TEVARTLD 105 (201)
T ss_dssp HHHHHHCC
T ss_pred HHHHhhhh
Confidence 45555553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=0.00015 Score=51.04 Aligned_cols=77 Identities=16% Similarity=0.243 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEEeeC--CChHH----HHHh---cC
Q 030694 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVS--RDQDE----MQAA---MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v~~~--~~~~~----~~~~---~~ 105 (173)
-+|+++||.|+ + ++|.+.+..+...|++|++.+++++..+.+.+. .+....... .+... ..+. .+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 46899999987 6 689999999999999999999987765555442 333322222 22221 1111 24
Q ss_pred CccEEEEcCCCc
Q 030694 106 TMDGIIDTVSAV 117 (173)
Q Consensus 106 ~~d~vid~~g~~ 117 (173)
..|+.+++.+..
T Consensus 83 ~~d~~v~~a~~~ 94 (258)
T d1qsga_ 83 KFDGFVHSIGFA 94 (258)
T ss_dssp SEEEEEECCCCC
T ss_pred ccceEEEeeccc
Confidence 799999988763
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=97.57 E-value=0.00018 Score=48.82 Aligned_cols=90 Identities=20% Similarity=0.188 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++.|+|.|.+|...++.++..|++|++.++...+.. ... .+.... . .++++....|++.-+++...
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~-~~~~~~---~---~l~~ll~~sD~i~~~~plt~~T 118 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERA-LGLQRV---S---TLQDLLFHSDCVTLHCGLNEHN 118 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHH-HTCEEC---S---SHHHHHHHCSEEEECCCCCTTC
T ss_pred eeCceEEEeccccccccceeeeeccccceeeccCcccccc-hhh-hccccc---c---chhhccccCCEEEEeecccccc
Confidence 4688999999999999999999999999999998654322 222 333221 1 12233345677766655331
Q ss_pred --c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -...+..|+++..+|.++.
T Consensus 119 ~~li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 119 HHLINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp TTSBSHHHHTTSCTTEEEEECSC
T ss_pred hhhhhHHHHhccCCCCeEEecCC
Confidence 1 1255667777777776663
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.56 E-value=9.1e-05 Score=52.43 Aligned_cols=75 Identities=16% Similarity=0.060 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH---CCCeEEEEeCCcchHHHHHHHcC----CCE----EeeCCChHHHHHhc-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAVERLG----ADS----FLVSRDQDEMQAAM----- 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~---~g~~v~~~~~~~~~~~~~~~~~g----~~~----v~~~~~~~~~~~~~----- 104 (173)
.|+.++|.|+ +++|+..++.+.. .|++|+++++++++++.+.+++. ... ..|-.+.+.++++.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 5777888898 8999988876543 68999999999999887766442 212 23444443333221
Q ss_pred ------CCccEEEEcCCC
Q 030694 105 ------GTMDGIIDTVSA 116 (173)
Q Consensus 105 ------~~~d~vid~~g~ 116 (173)
...|+++++.|.
T Consensus 85 ~~~~~~~~~~~lvnnag~ 102 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred hhhhccCceEEEEecccc
Confidence 257888888764
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.55 E-value=0.00022 Score=49.76 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=65.2
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHhcCCccE
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+......++.++||-+|+|. |..+..+++ .|++|++++.+++-++.+++.+ +. -.++..+-.+. ...+.+|+
T Consensus 33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l--~~~~~fD~ 108 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI--AFKNEFDA 108 (251)
T ss_dssp HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC--CCCSCEEE
T ss_pred HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc--ccccccch
Confidence 33333447788999999974 777777666 6889999999998888877743 21 22333222121 12247999
Q ss_pred EEEcCCCc---------cchHHHHHhhhcCCEEEE
Q 030694 110 IIDTVSAV---------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 110 vid~~g~~---------~~~~~~~~~l~~~G~~v~ 135 (173)
|+...+.- ..+..+.++|+|||+++.
T Consensus 109 I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 109 VTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp EEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 98754321 236678899999998875
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=97.54 E-value=0.00019 Score=48.56 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=57.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...+++++..|++|...++.......... .+... +. .++++....|++.-+++...
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~~---~~---~l~~ll~~sD~v~l~~plt~~T~ 118 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-YQATF---HD---SLDSLLSVSQFFSLNAPSTPETR 118 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-HTCEE---CS---SHHHHHHHCSEEEECCCCCTTTT
T ss_pred cccceEEeecccchHHHHHHHHhhccccccccccccccchhhc-ccccc---cC---CHHHHHhhCCeEEecCCCCchHh
Confidence 4799999999999999999999999999999976554333333 22211 11 12233445677766655421
Q ss_pred -c-hHHHHHhhhcCCEEEEeC
Q 030694 119 -P-LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 -~-~~~~~~~l~~~G~~v~~g 137 (173)
. -...+..|+++..+|.++
T Consensus 119 ~li~~~~l~~mk~~a~lIN~s 139 (191)
T d1gdha1 119 YFFNKATIKSLPQGAIVVNTA 139 (191)
T ss_dssp TCBSHHHHTTSCTTEEEEECS
T ss_pred heecHHHhhCcCCccEEEecC
Confidence 1 125666777777776665
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.52 E-value=0.0003 Score=47.29 Aligned_cols=89 Identities=22% Similarity=0.256 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
..++++.|+|.|.+|...++.++..|++|++.++...+.... . .+.. . . .++++....|++.-+++...
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~-~~~~-~---~---~l~ell~~sDiv~~~~Plt~~T 112 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-Q-LGIE-L---L---SLDDLLARADFISVHLPKTPET 112 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-H-HTCE-E---C---CHHHHHHHCSEEEECCCCSTTT
T ss_pred ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHh-h-cCce-e---c---cHHHHHhhCCEEEEcCCCCchh
Confidence 357899999999999999999999999999999876544333 2 3332 1 1 13344556788887776432
Q ss_pred --ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 --PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..+|.++-
T Consensus 113 ~~lin~~~l~~mk~~a~lIN~sR 135 (184)
T d1ygya1 113 AGLIDKEALAKTKPGVIIVNAAR 135 (184)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSC
T ss_pred hhhhhHHHHhhhCCCceEEEecc
Confidence 12 267778888888888774
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=97.52 E-value=0.00029 Score=47.49 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.+.++.|+|.|.+|...++.++..|++|...++........+. .+.... . .+.+.....|++.-+++...
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~~~---~---~l~~~l~~sD~v~~~~plt~~T 114 (188)
T d2naca1 42 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTWH---A---TREDMYPVCDVVTLNCPLHPET 114 (188)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEEC---S---SHHHHGGGCSEEEECSCCCTTT
T ss_pred ccccceeeccccccchhhhhhhhccCceEEEEeecccccccccc-cccccc---C---CHHHHHHhccchhhcccccccc
Confidence 36889999999999999999999999999999987655444444 442211 1 22234456777766665431
Q ss_pred ---chHHHHHhhhcCCEEEEeC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g 137 (173)
.-...+..|+++..+|.++
T Consensus 115 ~~li~~~~l~~mk~ga~lIN~a 136 (188)
T d2naca1 115 EHMINDETLKLFKRGAYIVNTA 136 (188)
T ss_dssp TTCBSHHHHTTSCTTEEEEECS
T ss_pred hhhhHHHHHHhCCCCCEEEecC
Confidence 1236667777777776665
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=0.00068 Score=44.80 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=74.6
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+-+||+....+..+.++..--.|++++|+|. ..+|.-++.++...|++|+........+..
T Consensus 17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~------------------ 78 (170)
T d1a4ia1 17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE------------------ 78 (170)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH------------------
T ss_pred CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH------------------
Confidence 5678888888888888887678999999998 689999999999999999988765443322
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.....|+++-++|.+..+.. ..++++-.++.+|..
T Consensus 79 ---~~~~aDivi~a~G~~~~i~~--~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 79 ---EVNKGDILVVATGQPEMVKG--EWIKPGAIVIDCGIN 113 (170)
T ss_dssp ---HHTTCSEEEECCCCTTCBCG--GGSCTTCEEEECCCB
T ss_pred ---HHhhccchhhcccccccccc--ccccCCCeEeccCcc
Confidence 22356888888888865443 358888888888853
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.0003 Score=50.49 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=59.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEE---eCCcchHHHH---HHHcC---CC---EEeeCCChHHHHHh-----cCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVI---STSPSKKSEA---VERLG---AD---SFLVSRDQDEMQAA-----MGT 106 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~---~~~~~~~~~~---~~~~g---~~---~v~~~~~~~~~~~~-----~~~ 106 (173)
-+||.|+ +++|++.++.+...|++|+.+ .++.++.+.+ .+.+. .. ...|-.+.+.+.+. .+.
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 3466698 899999999999999875444 4444433332 22232 22 12355555444333 248
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (173)
+|+++++.|... ..+.++..|+ .+|+++.+++..+
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g 145 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG 145 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence 999999998741 2335566663 4689998876544
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.44 E-value=0.00016 Score=50.85 Aligned_cols=74 Identities=12% Similarity=0.047 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHH---HCCCeEEEEeCCcchHHHHHHH--cCCC-E--EeeCCChH----HHHHh-----c
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAK---AMGVKVTVISTSPSKKSEAVER--LGAD-S--FLVSRDQD----EMQAA-----M 104 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~---~~g~~v~~~~~~~~~~~~~~~~--~g~~-~--v~~~~~~~----~~~~~-----~ 104 (173)
-++|||.|+ +++|+..++.+. ..|++|++++|++++.+.+++. .+.. . ..|-.+.+ ..+++ .
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 478999998 899999887664 3688999999999987776541 1222 1 23444432 22222 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 82 ~~iDiLvnNAg~ 93 (248)
T d1snya_ 82 QGLNVLFNNAGI 93 (248)
T ss_dssp GCCSEEEECCCC
T ss_pred CCcceEEeeccc
Confidence 479999999885
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.44 E-value=0.00023 Score=50.27 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcchH-HHHHHHcCCCE---EeeCCChHH----HHHh------
Q 030694 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK-SEAVERLGADS---FLVSRDQDE----MQAA------ 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~~-~~~~~~~g~~~---v~~~~~~~~----~~~~------ 103 (173)
-+|+++||.|+ | ++|+..++.+...|++|+++.+++++. +.+.+.++... ..|-.+.+. .+.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 46899999995 4 599999999999999999999988776 33444455322 223333221 1111
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+.+|+++++.|.
T Consensus 84 ~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 84 GNKLDGVVHSIGF 96 (268)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCcceeeecccc
Confidence 1368999999984
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.41 E-value=0.00047 Score=51.88 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=69.8
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc----------C----CCEEeeC-
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL----------G----ADSFLVS- 94 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~----------g----~~~v~~~- 94 (173)
...+.. ..+++|++++=+|+| +|..+.++|+..|+ +|++++.++...+.++++. | .......
T Consensus 206 ~~Il~~-l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~ 283 (406)
T d1u2za_ 206 SDVYQQ-CQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 283 (406)
T ss_dssp HHHHHH-TTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHH-hCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence 344444 445999999999998 68889999999987 8999999988777765521 1 1111111
Q ss_pred --CChHHHHHhcCCccEEEEcCC--Cc---cchHHHHHhhhcCCEEEEeC
Q 030694 95 --RDQDEMQAAMGTMDGIIDTVS--AV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 95 --~~~~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
...+........+|+++-..- .+ ..+..+.+.|+|||+++..-
T Consensus 284 ~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 284 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred chhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence 112344444457888874321 12 23567888999999998864
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.40 E-value=0.00019 Score=49.29 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=63.5
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CCCEEeeC--CChHHHHHhcCCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GADSFLVS--RDQDEMQAAMGTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~--~~~~~~~~~~~~~d~vi 111 (173)
..+++|++||=+|+| .|..+..++...+. +|++++.+++..+.+++.. +....+.. ............+|+++
T Consensus 52 l~lkpg~~VLDlGcG-~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~ 130 (209)
T d1nt2a_ 52 LKLRGDERVLYLGAA-SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY 130 (209)
T ss_dssp CCCCSSCEEEEETCT-TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCCCEEEEeCCc-CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEE
Confidence 456999999999986 35566666766653 8999999999888776632 32222222 12222222233688887
Q ss_pred EcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
..+.... .+..+.+.|+|||+++.+
T Consensus 131 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 159 (209)
T d1nt2a_ 131 QDIAQKNQIEILKANAEFFLKEKGEVVIM 159 (209)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence 6654432 355677899999998765
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.35 E-value=0.0032 Score=41.56 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=63.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEe-CCcc-hHHHHHHHcCCCEEeeC-CChHHHH-----------HhcCCccE
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIS-TSPS-KKSEAVERLGADSFLVS-RDQDEMQ-----------AAMGTMDG 109 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~-~~~~-~~~~~~~~~g~~~v~~~-~~~~~~~-----------~~~~~~d~ 109 (173)
+|.|.|.|.+|+...+.+.... .+++.+. .++. ....+.+ .+.+..... ....... ....++|+
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv 82 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE-LGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh-cCceeecccccceeeecccCccccchhhhhhccCCE
Confidence 6899999999999999887654 4666554 3333 3344444 564432211 1111111 11238999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|+||+|.-...+.+-.++..|-+.|..+....
T Consensus 83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~ 114 (172)
T d2czca2 83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA 114 (172)
T ss_dssp EEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred EEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence 99999988667788889999999999886543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.35 E-value=0.00011 Score=49.69 Aligned_cols=84 Identities=14% Similarity=0.010 Sum_probs=59.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CCE----EeeCC--ChHHHHHhcCCccEEEEcC
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADS----FLVSR--DQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~~----v~~~~--~~~~~~~~~~~~d~vid~~ 114 (173)
-.+|.|+|+|.+|.+.+..+...|.+|++++++++..+.+.+ -+ ..+ -+..+ ....+++...+.|++|-++
T Consensus 7 m~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~-~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiav 85 (189)
T d1n1ea2 7 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE-KRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 85 (189)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH-HTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECS
T ss_pred eceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh-cccccccccccccccccccchhhhhccCCCCEEEEcC
Confidence 357999999999999999998888899999999998888876 22 110 11100 0122344456889999999
Q ss_pred CCccchHHHHHhhh
Q 030694 115 SAVHPLMPLIGLLK 128 (173)
Q Consensus 115 g~~~~~~~~~~~l~ 128 (173)
+.. .+...++.++
T Consensus 86 Ps~-~~~~~~~~~~ 98 (189)
T d1n1ea2 86 PTQ-FLRGFFEKSG 98 (189)
T ss_dssp CHH-HHHHHHHHHC
T ss_pred cHH-HHHHHHHHHH
Confidence 987 4666665543
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00023 Score=50.64 Aligned_cols=94 Identities=20% Similarity=0.224 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.++.+||-+|+| .|..+..+++.. +.++++++.+++..+.+++.......+..+..+ +.-..+.+|+|+....-. .
T Consensus 83 ~~~~~iLDiGcG-~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~-l~~~~~sfD~v~~~~~~~-~ 159 (268)
T d1p91a_ 83 DKATAVLDIGCG-EGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR-LPFSDTSMDAIIRIYAPC-K 159 (268)
T ss_dssp TTCCEEEEETCT-TSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTS-CSBCTTCEEEEEEESCCC-C
T ss_pred CCCCEEEEeCCC-CcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhh-ccCCCCCEEEEeecCCHH-H
Confidence 678899999986 355666666654 569999999999888888754433332222111 111123799999665544 6
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
+..+.+.|+|||+++...
T Consensus 160 ~~e~~rvLkpgG~l~~~~ 177 (268)
T d1p91a_ 160 AEELARVVKPGGWVITAT 177 (268)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEe
Confidence 889999999999998774
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.33 E-value=0.0015 Score=43.44 Aligned_cols=95 Identities=18% Similarity=0.183 Sum_probs=59.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeC-Ccch-HHHHHHHcCCCEEeeCCChHHHHH-----------hcCCccEE
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIST-SPSK-KSEAVERLGADSFLVSRDQDEMQA-----------AMGTMDGI 110 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~-~~~~-~~~~~~~~g~~~v~~~~~~~~~~~-----------~~~~~d~v 110 (173)
+|.|.|.|.+|+...+++.... .+++.+.. .+.. ...+.. .+..............+ ...++|+|
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV 81 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR-RGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH-TTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcc-cCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence 6889999999999999988765 47777653 3332 333333 34322211111111111 11269999
Q ss_pred EEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+||+|.-...+.+-.+++.|-+++..+...
T Consensus 82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~~ 111 (178)
T d1b7go1 82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (178)
T ss_dssp EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred EECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence 999998756667778888877888876543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=97.31 E-value=0.00021 Score=52.40 Aligned_cols=79 Identities=22% Similarity=0.158 Sum_probs=55.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC--EEe--eCCChHHHHHhcCCccE
Q 030694 39 LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD--SFL--VSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 39 ~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~--~v~--~~~~~~~~~~~~~~~d~ 109 (173)
.+++|++|||.|+ |-+|..++..+...|++|++++|+.++...++... ... ..+ |-.+...+.+...++|.
T Consensus 7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (342)
T d1y1pa1 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchh
Confidence 4578999999998 99999999988889999999999887766554411 111 112 22233333344458999
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
++.+....
T Consensus 87 v~~~a~~~ 94 (342)
T d1y1pa1 87 VAHIASVV 94 (342)
T ss_dssp EEECCCCC
T ss_pred hhhhcccc
Confidence 99887764
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=97.28 E-value=0.00018 Score=49.68 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH---CCCeEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~---~g~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
.+++.+||-+|+| .|..+..+++. .+++|++++.+++-++.+++.. +....+.....+........+|+++.+
T Consensus 37 ~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~ 115 (225)
T d1im8a_ 37 VTADSNVYDLGCS-RGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILN 115 (225)
T ss_dssp CCTTCEEEEESCT-TCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEE
T ss_pred cCCCCEEEEeccc-hhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEe
Confidence 3789999999986 45555666654 5789999999999888887743 211111111111111112366777654
Q ss_pred CCCc--------cchHHHHHhhhcCCEEEEeC
Q 030694 114 VSAV--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g~~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
.... ..+..+.+.|+|||.++...
T Consensus 116 ~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~ 147 (225)
T d1im8a_ 116 FTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE 147 (225)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence 4321 24778889999999998764
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.28 E-value=0.00015 Score=48.56 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~ 77 (173)
.+++|+|+|+|+.|+.++..++..|+ .|+++++++.
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 36889999999999999999999999 5999998765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00014 Score=50.46 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.+++|||+|+ |.+|...++.+...|. +|+++.|++.+...-.. -.... +.|..+.+...+...++|+++.|+|..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~-~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc-ceeeeeeeccccccccccccccccccccccccc
Confidence 4679999999 9999999998888885 89999987654332111 11111 233333344444556899999999874
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.26 E-value=0.0029 Score=41.76 Aligned_cols=95 Identities=23% Similarity=0.240 Sum_probs=62.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC----EEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
+|-|+|.|.+|...++-+...|++|+++++++++.+.+.++.+.. ........+..-......+.++.++.....
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 478899999999999999999999999999999999998743311 111112223333334456666666665432
Q ss_pred ---hHHHHHhhhcCCEEEEeCCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~~ 139 (173)
+......+.++..++..+..
T Consensus 83 ~~~~~~~~~~~~~~~iii~~st~ 105 (178)
T d1pgja2 83 DSTIEQLKKVFEKGDILVDTGNA 105 (178)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCC
T ss_pred hhhhhhhhhhccccceecccCcc
Confidence 23455566666666666543
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=97.25 E-value=0.0057 Score=40.26 Aligned_cols=96 Identities=19% Similarity=0.212 Sum_probs=61.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-CeEEEEe-CCc-chHHHHHHHcCCCEEeeCCCh-HHHHH-----------hcCCcc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVIS-TSP-SKKSEAVERLGADSFLVSRDQ-DEMQA-----------AMGTMD 108 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~-~~~-~~~~~~~~~~g~~~v~~~~~~-~~~~~-----------~~~~~d 108 (173)
.+|.|.|.|.+|+.+.+++...+ .+++.+. .++ .....+.. ++.+......+. ...++ +..++|
T Consensus 2 ~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vD 80 (171)
T d1cf2o1 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALK-KGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEAD 80 (171)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCS
T ss_pred eEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHh-cCCceEecccccceeecccCcccCCChhHhhcCCC
Confidence 37899999999999999887766 3666554 332 23344444 554432221111 11111 123899
Q ss_pred EEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 109 GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+||+|.-.....+-.++..|-+++..+...
T Consensus 81 vViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 81 IVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp EEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred EEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 99999998766677778888888888876543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=97.24 E-value=0.00073 Score=45.89 Aligned_cols=86 Identities=23% Similarity=0.270 Sum_probs=59.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.+++|.|+|.|.+|..++++++..|++|++.++...+.. ... +...+ ++++....|++.-+++...
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----~~~---~~~~~---l~~l~~~~D~v~~~~plt~~T~ 112 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----HPD---FDYVS---LEDLFKQSDVIDLHVPGIEQNT 112 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC-----CTT---CEECC---HHHHHHHCSEEEECCCCCGGGT
T ss_pred cceeeeeeecccccccccccccccceeeeccCCccchhh-----hcc---hhHHH---HHHHHHhcccceeeeccccccc
Confidence 478999999999999999999999999999998654211 001 11111 2333445788877766432
Q ss_pred --chHHHHHhhhcCCEEEEeCC
Q 030694 119 --PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~~~~~~~l~~~G~~v~~g~ 138 (173)
.-.+.+..|+++..+|.++.
T Consensus 113 ~li~~~~l~~mk~~a~lIN~aR 134 (199)
T d1dxya1 113 HIINEAAFNLMKPGAIVINTAR 134 (199)
T ss_dssp TSBCHHHHHHSCTTEEEEECSC
T ss_pred ccccHHHhhccCCceEEEeccc
Confidence 12367778888888888774
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.22 E-value=0.00097 Score=46.78 Aligned_cols=78 Identities=21% Similarity=0.296 Sum_probs=52.8
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcch---HHH----HHHHcCCCE---EeeCCChHHHHHhc--
Q 030694 39 LDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSK---KSE----AVERLGADS---FLVSRDQDEMQAAM-- 104 (173)
Q Consensus 39 ~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~---~~~----~~~~~g~~~---v~~~~~~~~~~~~~-- 104 (173)
.++|+.++||.|+ |++|+..++.+...|+ +|+.+.|++.+ .+. +.. .|... ..|-.+.+.++++.
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHT
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhcc
Confidence 4588899999998 9999999999999999 57778776322 222 222 45432 23444544444432
Q ss_pred ----CCccEEEEcCCCc
Q 030694 105 ----GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ----~~~d~vid~~g~~ 117 (173)
.++|.++.+.|..
T Consensus 84 i~~~~~i~~vv~~ag~~ 100 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAATL 100 (259)
T ss_dssp SCTTSCEEEEEECCCCC
T ss_pred ccccccccccccccccc
Confidence 2689999999874
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.22 E-value=0.00078 Score=46.78 Aligned_cols=98 Identities=15% Similarity=0.087 Sum_probs=62.4
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcC---CCEEeeCCC--hHHHHHhcCCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLG---ADSFLVSRD--QDEMQAAMGTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~--~~~~~~~~~~~d~vi 111 (173)
..+++|++||=+|+| .|..+..+++.. +.+|++++.++..++.+++... ....+.... +.........+|+++
T Consensus 70 l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~ 148 (230)
T d1g8sa_ 70 MPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEee
Confidence 345999999999986 356666666654 3489999999998888877322 112222222 222111223566677
Q ss_pred EcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
..+.... .+..+.+.|+|||+++.+
T Consensus 149 ~~~~~~~~~~~~l~~~~r~LKpgG~~~i~ 177 (230)
T d1g8sa_ 149 EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHhcccCceEEEE
Confidence 6665432 255677889999998765
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.22 E-value=0.0011 Score=44.93 Aligned_cols=71 Identities=21% Similarity=0.211 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHH---------------HhcCCccE
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQ---------------AAMGTMDG 109 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---------------~~~~~~d~ 109 (173)
+|.|+|.|-+|+.++..+...|.+|++++.++++.+.+++ |......+...+.+. +.....|+
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~--g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ--GKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc--cCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 5889999999999999998999999999999988888765 322222221112111 11226899
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
+|-|++.+
T Consensus 80 i~i~VpTP 87 (202)
T d1mv8a2 80 SFICVGTP 87 (202)
T ss_dssp EEECCCCC
T ss_pred EEEecCcc
Confidence 99999986
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=97.22 E-value=0.00029 Score=49.19 Aligned_cols=36 Identities=31% Similarity=0.342 Sum_probs=32.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
..++|+|+|+|+.|++++..++..|.+|++++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 468899999999999999999999999999998643
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=97.19 E-value=0.00024 Score=50.19 Aligned_cols=34 Identities=32% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
+++|+|+|+|..|+.++..++..|.+|+++++++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5789999999999999999999999999999754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.13 E-value=0.0052 Score=36.45 Aligned_cols=73 Identities=10% Similarity=0.209 Sum_probs=52.3
Q ss_pred CCCCCEEEEEcCChHHHHH-HHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 40 DKPGMHVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a-~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.+..+++.++|-|++|..+ +++++..|++|.+.+.... ..+.+++ .|... ......+. ..+.|+++-+.+.+
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v-~~g~~~~~----i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKI-YIGHAEEH----IEGASVVVVSSAIK 78 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEE-EESCCGGG----GTTCSEEEECTTSC
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeE-EECCcccc----CCCCCEEEECCCcC
Confidence 3567899999998888666 8999999999999998754 3455555 78753 33333332 24688888777765
Q ss_pred c
Q 030694 118 H 118 (173)
Q Consensus 118 ~ 118 (173)
.
T Consensus 79 ~ 79 (96)
T d1p3da1 79 D 79 (96)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.13 E-value=0.0011 Score=42.68 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
-.|++|||+|+|.+|..-++.+...|++|++++..
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999999999999999653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.12 E-value=0.0031 Score=40.44 Aligned_cols=91 Identities=16% Similarity=0.205 Sum_probs=59.8
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH----HHhc---CCccEEEEc
Q 030694 42 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM----QAAM---GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G-~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~----~~~~---~~~d~vid~ 113 (173)
.-++|.|+| .|.+|...++.++..|++|.+.+++.+....... .+.+.++........ .++. ..=.+++|+
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~ 86 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL-ANADVVIVSVPINLTLETIERLKPYLTENMLLADL 86 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH-TTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh-hhccccccccchhhheeeeecccccccCCceEEEe
Confidence 346899999 5999999999999999999999998877666555 566766655543322 2222 133477888
Q ss_pred CCCccchHHHHHhhhcCCEEE
Q 030694 114 VSAVHPLMPLIGLLKSQGKLV 134 (173)
Q Consensus 114 ~g~~~~~~~~~~~l~~~G~~v 134 (173)
..........+.... ..+++
T Consensus 87 ~Svk~~~~~~~~~~~-~~~~v 106 (152)
T d2pv7a2 87 TSVKREPLAKMLEVH-TGAVL 106 (152)
T ss_dssp CSCCHHHHHHHHHHC-SSEEE
T ss_pred cccCHHHHHHHHHHc-cCCEE
Confidence 876533333333322 34554
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=97.10 E-value=0.0028 Score=43.82 Aligned_cols=82 Identities=26% Similarity=0.186 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.|.+|+|.|.|.+|..+++.+...|+++++++.+..+.+.+....|...+ +. .+. +.-.+|+.+=|..+...-
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~--~~~---~~~~cDIl~PcA~~~~I~ 110 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP--NAI---YGVTCDIFAPCALGAVLN 110 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG--GGT---TTCCCSEEEECSCSCCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CC--ccc---ccccccEecccccccccC
Confidence 468999999999999999999999999999999998888888876776433 21 111 123678887666655333
Q ss_pred HHHHHhhh
Q 030694 121 MPLIGLLK 128 (173)
Q Consensus 121 ~~~~~~l~ 128 (173)
......++
T Consensus 111 ~~~~~~l~ 118 (230)
T d1leha1 111 DFTIPQLK 118 (230)
T ss_dssp TTHHHHCC
T ss_pred hHHhhccC
Confidence 34444453
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.09 E-value=0.002 Score=45.08 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=47.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH-HHH----HHHcCCCEEeeCC----C---hHHHH-------Hhc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEA----VERLGADSFLVSR----D---QDEMQ-------AAM 104 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~-~~~----~~~~g~~~v~~~~----~---~~~~~-------~~~ 104 (173)
..||.|+ +++|.+.++.+...|++|++++++.++. +.+ ....+........ + .+... +..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 4688898 8999999999999999999999886653 322 2222333322111 1 12121 123
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|+++++.|.
T Consensus 83 g~iDilvnnAG~ 94 (266)
T d1mxha_ 83 GRCDVLVNNASA 94 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 589999999985
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=97.08 E-value=0.0012 Score=40.81 Aligned_cols=38 Identities=24% Similarity=0.226 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
..++++++|+|+|.+|+-++..++..|.+|+++.+.+.
T Consensus 19 ~~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 19 YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp SCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence 37789999999999999999999999999999998754
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.08 E-value=0.0027 Score=40.87 Aligned_cols=95 Identities=18% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc-------CCCEEeeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-------GADSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
..+.+|.|+|+|.+|..++..+...+. ++..++.++++.+-....+ +....+-..+. +...+.|+++
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv 79 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV 79 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence 457899999999999998888887775 7999999887632211111 11111211222 2245899999
Q ss_pred EcCCCcc---------------ch---HHHHHhhhcCCEEEEeCCC
Q 030694 112 DTVSAVH---------------PL---MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 112 d~~g~~~---------------~~---~~~~~~l~~~G~~v~~g~~ 139 (173)
-+.|.+. .+ ...+..-.|.+.++.+.++
T Consensus 80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNP 125 (148)
T d1ldna1 80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNP 125 (148)
T ss_dssp ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCc
Confidence 9998762 11 1223334578888887643
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=97.08 E-value=0.0006 Score=45.97 Aligned_cols=97 Identities=21% Similarity=0.230 Sum_probs=60.8
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEE-eeCCChHHHHHhcCCccEEEE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~vid 112 (173)
...+++| +||-+|+| .|..+..+++ .|++|++++.+++.++.+++. .+.+.+ +...+.... ...+.+|+|+.
T Consensus 26 ~~~~~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~ 101 (198)
T d2i6ga1 26 AKVVAPG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILS 101 (198)
T ss_dssp HTTSCSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEE
T ss_pred cccCCCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEE
Confidence 3343555 89999997 6777776665 689999999999888776652 233211 111111100 12347999985
Q ss_pred cCCCc--------cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
..--. ..+..+.++|+|+|.++...
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 134 (198)
T d2i6ga1 102 TVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA 134 (198)
T ss_dssp ESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 44222 24556778899999887764
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00064 Score=45.87 Aligned_cols=41 Identities=24% Similarity=0.339 Sum_probs=36.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
++|.|+|+|.+|...++++...|++|++.+++++.++.+++
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~ 45 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK 45 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence 68999999999999999999999999999999987665544
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=97.04 E-value=0.0008 Score=47.36 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH--HHHhcCCccEEEEcCCCc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE--MQAAMGTMDGIIDTVSAV- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~d~vid~~g~~- 117 (173)
.++.++|=+|+| +|..+..++...+.+|++++.+++-++.+++.+.....++....+. .....+.+|+|+..-.-.
T Consensus 92 ~~~~~vLD~GcG-~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~h 170 (254)
T d1xtpa_ 92 HGTSRALDCGAG-IGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCT-TTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCCeEEEeccc-CChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccc
Confidence 678899999997 5777778777666699999999999999988665322222211111 111123799997654432
Q ss_pred -------cchHHHHHhhhcCCEEEEeC
Q 030694 118 -------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 -------~~~~~~~~~l~~~G~~v~~g 137 (173)
..+..+.+.|+|+|.++..-
T Consensus 171 l~d~d~~~~l~~~~~~LkpgG~iii~e 197 (254)
T d1xtpa_ 171 LTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence 13567778899999988753
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.04 E-value=0.0014 Score=46.78 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-----EEeeCCChHHHH-Hh--cCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-----SFLVSRDQDEMQ-AA--MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-----~v~~~~~~~~~~-~~--~~~~d~ 109 (173)
+.+++||-+|+| .|..+..+++ .|++|++++.+++-++.+++.. +.. ..+..-+..... .. .+++|.
T Consensus 55 ~~~~~vLD~GcG-~G~~~~~la~-~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 132 (292)
T d1xvaa_ 55 HGCHRVLDVACG-TGVDSIMLVE-EGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 132 (292)
T ss_dssp TTCCEEEESSCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCC-CcHHHHHHHH-cCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence 557899999987 5777777776 5899999999998877776532 111 111111111111 11 237999
Q ss_pred EEEcCCCc--------------cchHHHHHhhhcCCEEEE
Q 030694 110 IIDTVSAV--------------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 110 vid~~g~~--------------~~~~~~~~~l~~~G~~v~ 135 (173)
|+.....- ..+..+.+.|+|||+++.
T Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 98643211 146788899999999876
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.01 E-value=0.00066 Score=45.02 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=36.8
Q ss_pred EEEEEc-CChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc
Q 030694 45 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (173)
Q Consensus 45 ~vlI~G-~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 86 (173)
+|.|+| +|++|...++.+...|++|++++|++++.+.+.+++
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 578885 599999999999999999999999999888776644
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=97.00 E-value=0.0038 Score=41.03 Aligned_cols=95 Identities=16% Similarity=0.287 Sum_probs=59.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--cchHHHHHHHcCC------CEE--------eeCC-----ChHHHHHh
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAVERLGA------DSF--------LVSR-----DQDEMQAA 103 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~--~~~~~~~~~~~g~------~~v--------~~~~-----~~~~~~~~ 103 (173)
+|.|.|-|-+|+++.+++...+.+++.+... .+.+..+.+ +.. ..+ ++.. ......++
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~-yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i 80 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLK-YDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheee-cccccCccccccccccceeEecceeEEEEecCChHHC
Confidence 5889999999999999988888888777643 223444433 221 001 0000 00111112
Q ss_pred c---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 104 M---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 104 ~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
. .++|+++||+|.-...+.+..+++.|.+-|.++.+.
T Consensus 81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 120 (168)
T d2g82a1 81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (168)
T ss_dssp CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence 2 289999999998867778888898776555555443
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=97.00 E-value=0.0011 Score=48.23 Aligned_cols=76 Identities=21% Similarity=0.186 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCEE-eeCCChHHHHHhcC--CccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADSF-LVSRDQDEMQAAMG--TMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~v-~~~~~~~~~~~~~~--~~d~vid~ 113 (173)
.+++|||+|+ |-+|..+++.+...|.+|++++++..+...+.+.. +...+ .|-.+.+.+.+... .+|+++.+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 4799999998 99999999999999999999998776433332212 12211 23334454444433 78999998
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
++..
T Consensus 87 aa~~ 90 (356)
T d1rkxa_ 87 AAQP 90 (356)
T ss_dssp CSCC
T ss_pred hccc
Confidence 8864
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.99 E-value=0.00076 Score=49.49 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.++.+|||+|+ |-+|..++..+...|.+|+++++...+...... ... -...|..+.+...+...++|.++.+.+..
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~ 90 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM 90 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG-TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhc-ccCcEEEeechhHHHHHHHhhcCCeEeeccccc
Confidence 45789999998 999999999999999999999865443211111 111 12344445555555567999999988654
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.99 E-value=0.0013 Score=40.91 Aligned_cols=37 Identities=32% Similarity=0.267 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++++++|+|+|.+|+-+++.++.+|.+|+++.+.+.
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecCc
Confidence 6688999999999999999999999999999988753
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=96.99 E-value=0.0018 Score=45.85 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=52.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-----HHHHHH--HcCCCEE-eeCCChHHHHHhcCCccEEEEc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAVE--RLGADSF-LVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-----~~~~~~--~~g~~~v-~~~~~~~~~~~~~~~~d~vid~ 113 (173)
-++|||+|+ |-+|..++..+...|.+|+++.|+... .+.+.. ..+.+.+ .|..+.+...+...+.+.++.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 456999998 999999999999999999999986542 222222 1233322 2445566666667788999988
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
.+..
T Consensus 83 ~~~~ 86 (312)
T d1qyda_ 83 LAGG 86 (312)
T ss_dssp CCCS
T ss_pred hhhc
Confidence 8754
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.99 E-value=0.0016 Score=43.32 Aligned_cols=84 Identities=13% Similarity=0.125 Sum_probs=55.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHcCC--CE--EeeC---CChHHHHHhcCCccEEEEcCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGA--DS--FLVS---RDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~--~~--v~~~---~~~~~~~~~~~~~d~vid~~g 115 (173)
+|.|+|+|.+|.+.+..+...|.+|+++.+..++ .+.+.+ ... .. .+.. ...+..++...+.|+++.+++
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp 80 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-GREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-TCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhh-hhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence 6899999999999999998899999999885442 333332 110 00 0000 112344555668999999999
Q ss_pred CccchHHHHHhhhcC
Q 030694 116 AVHPLMPLIGLLKSQ 130 (173)
Q Consensus 116 ~~~~~~~~~~~l~~~ 130 (173)
.. .+...++.+++.
T Consensus 81 s~-~~~~~~~~l~~~ 94 (180)
T d1txga2 81 TD-GVLPVMSRILPY 94 (180)
T ss_dssp GG-GHHHHHHHHTTT
T ss_pred hh-hhHHHHHhhccc
Confidence 87 466666665543
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0047 Score=44.94 Aligned_cols=101 Identities=14% Similarity=0.026 Sum_probs=64.7
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH----------cC----CCEEeeCCC--h
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER----------LG----ADSFLVSRD--Q 97 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~----------~g----~~~v~~~~~--~ 97 (173)
.....++++++++-+|+| .|..+.++++..++ ++++++.+++..+.+++. +| .-.++..+- .
T Consensus 144 ~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~ 222 (328)
T d1nw3a_ 144 IDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 222 (328)
T ss_dssp HHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSH
T ss_pred HHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccccc
Confidence 344456999999999997 57788889998888 799999998876666542 22 112332222 2
Q ss_pred HHHHHhcCCccEEEEcCC--Cc---cchHHHHHhhhcCCEEEEeC
Q 030694 98 DEMQAAMGTMDGIIDTVS--AV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 98 ~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
+.... ...+|+++-..- .+ ..+..+++.|+|||+++..-
T Consensus 223 ~~~~~-~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 223 EWRER-IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp HHHHH-HHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccc-cCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence 22211 124678874221 12 23456778899999998764
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.97 E-value=0.00065 Score=45.74 Aligned_cols=99 Identities=15% Similarity=0.097 Sum_probs=61.4
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C--EEeeCCChHHHHHhcCC
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D--SFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~--~v~~~~~~~~~~~~~~~ 106 (173)
+.......++++||-+|+| .|..+..+++ .+.+|++++.++...+.+++++ +. . .++..+..+.. ..+.
T Consensus 44 Li~~l~~~~~~~VLDiGcG-~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~~~~ 119 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLGCG-YGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--KDRK 119 (194)
T ss_dssp HHHHCCCCTTCEEEEETCT-TSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--TTSC
T ss_pred HHHhCCcCCCCeEEEEeec-CChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--ccCC
Confidence 3344445889999999986 3445555554 5679999999988888777632 21 1 22222211111 1237
Q ss_pred ccEEEEcCC---Cc----cchHHHHHhhhcCCEEEEe
Q 030694 107 MDGIIDTVS---AV----HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 107 ~d~vid~~g---~~----~~~~~~~~~l~~~G~~v~~ 136 (173)
+|+|+.... +. ..+..+.+.|+|+|+++..
T Consensus 120 fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 156 (194)
T d1dusa_ 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence 999996433 11 1355777889999987654
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.00093 Score=40.98 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=48.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcC--CccEE
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMG--TMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~--~~d~v 110 (173)
.+.+|.|+|+|-+|.++++.++.+|.++++.+.+++. -+.. +.... +.++++.+.+.+... ++|++
T Consensus 10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~--PA~~-va~~~i~~~~~d~~~l~~~~~~~~~Dvi 78 (111)
T d1kjqa2 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA--PAMH-VAHRSHVINMLDGDALRRVVELEKPHYI 78 (111)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC--GGGG-GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCC--chhh-cCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence 4567999999999999999999999999999987652 2222 33333 345666666655542 68888
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.93 E-value=0.00048 Score=48.00 Aligned_cols=91 Identities=13% Similarity=0.061 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.++++||-+|+| .|..+..+++ .|.+|++++.+++-++.+++.. |. -.++..+-.+. ...+.+|+|+...+.
T Consensus 36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~--~~~~~fD~i~~~~~~ 111 (246)
T d1y8ca_ 36 LVFDDYLDLACG-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL--NINRKFDLITCCLDS 111 (246)
T ss_dssp CCTTEEEEETCT-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC--CCSCCEEEEEECTTG
T ss_pred CCCCeEEEEeCc-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh--cccccccccceeeee
Confidence 456899999987 4666666655 6889999999999887776633 32 22332211111 123479999964332
Q ss_pred c----------cchHHHHHhhhcCCEEEE
Q 030694 117 V----------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 117 ~----------~~~~~~~~~l~~~G~~v~ 135 (173)
- ..+..+.++|+|||.++.
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 1 135678889999999875
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.93 E-value=0.0011 Score=40.76 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=32.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
..++++|+|+|.+|+-+++.+..+|.+|+++.+.+.
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 347899999999999999999999999999998764
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.92 E-value=0.0008 Score=46.51 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+..++|+|+|+|+.|+.++..++..|.+|++++.+++
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 5689999999999999999999999999999997754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.90 E-value=0.0014 Score=40.45 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++..++++|+|+|.+|+-++..++.+|.+|+++.+.+
T Consensus 19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 19 IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred cCCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence 3556899999999999999999999999999999875
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.0012 Score=47.70 Aligned_cols=99 Identities=17% Similarity=0.038 Sum_probs=55.2
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHH--HHcCC---CEEeeCCChHHHHHhcCC
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAV--ERLGA---DSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~--~~~g~---~~v~~~~~~~~~~~~~~~ 106 (173)
++.+...+.++++||-+|+| .|..+..+++ .|+ +|++++.++.-....+ ...+. ..++..+..+ +......
T Consensus 26 ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~ 102 (311)
T d2fyta1 26 FIYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE-VHLPVEK 102 (311)
T ss_dssp HHHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT-SCCSCSC
T ss_pred HHHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH-hcCcccc
Confidence 35554455789999999987 5666555555 576 8999998875322111 11331 1233322222 1111248
Q ss_pred ccEEEEcCCC-----ccchHH----HHHhhhcCCEEE
Q 030694 107 MDGIIDTVSA-----VHPLMP----LIGLLKSQGKLV 134 (173)
Q Consensus 107 ~d~vid~~g~-----~~~~~~----~~~~l~~~G~~v 134 (173)
+|+++...-+ ...+.. .-+.|+|+|+++
T Consensus 103 ~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii 139 (311)
T d2fyta1 103 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139 (311)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence 9999853222 112222 235789999876
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.89 E-value=0.0015 Score=47.63 Aligned_cols=99 Identities=26% Similarity=0.248 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHh---cCCccE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA---MGTMDG 109 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~---~~~~d~ 109 (173)
+++|++||=+++|. |..++.+++ .|+ +|+.++.+++..+.+++++ |. ..++..+..++.... ...||+
T Consensus 143 ~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~ 220 (324)
T d2as0a2 143 VQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI 220 (324)
T ss_dssp CCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence 47899999987742 333344444 466 8999999999888887743 32 133443334444333 247999
Q ss_pred EEEcCCCc---------------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 110 IIDTVSAV---------------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 110 vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
|+--.+.- ..+..++++|+|||.++.+....
T Consensus 221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 98544421 13556778999999999886443
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=96.87 E-value=0.0025 Score=41.60 Aligned_cols=88 Identities=9% Similarity=0.130 Sum_probs=60.9
Q ss_pred EEEEEcCChHHHH-HHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH
Q 030694 45 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (173)
Q Consensus 45 ~vlI~G~g~~G~~-a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (173)
++.|+|+|.+|.. .....+.. +..+++.++++++.+.+.+.++...+++.- .+.+ ..++|+++-|++.....+.
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ll---~~~iD~V~I~tp~~~H~~~ 78 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDY-RDVL---QYGVDAVMIHAATDVHSTL 78 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSST-TGGG---GGCCSEEEECSCGGGHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccH-HHhc---ccccceecccccccccccc
Confidence 6889999999854 55555555 458888888888888887778865443211 1222 2379999999998877777
Q ss_pred HHHhhhcCCEEEEeC
Q 030694 123 LIGLLKSQGKLVLLG 137 (173)
Q Consensus 123 ~~~~l~~~G~~v~~g 137 (173)
+..++..| .-+++.
T Consensus 79 ~~~al~~g-k~V~~E 92 (167)
T d1xeaa1 79 AAFFLHLG-IPTFVD 92 (167)
T ss_dssp HHHHHHTT-CCEEEE
T ss_pred cccccccc-cccccC
Confidence 77777765 445554
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.87 E-value=0.007 Score=40.01 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=59.8
Q ss_pred EEEEEcCChHHHHHHHHHHHC-CCeEEEE-eCCcchHHHHHHHcCCC---EEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAVERLGAD---SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~-g~~v~~~-~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
++.|+|+|.+|...++..+.. +++++++ ++++++.+.+.+.++.. .++ ++.+.+-+ ...+|+++-+++....
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~-~~~iD~v~I~tp~~~h 79 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH--GSYESLLE-DPEIDALYVPLPTSLH 79 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE--SSHHHHHH-CTTCCEEEECCCGGGH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec--CcHHHhhh-ccccceeeecccchhh
Confidence 688999999998888888776 5677755 56777766666656632 232 23222211 3479999999998877
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
.+.+..++..| .=+++.
T Consensus 80 ~~~~~~~l~~g-~~v~~E 96 (184)
T d1ydwa1 80 VEWAIKAAEKG-KHILLE 96 (184)
T ss_dssp HHHHHHHHTTT-CEEEEC
T ss_pred cchhhhhhhcc-ceeecc
Confidence 77777777654 545554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.84 E-value=0.0016 Score=41.97 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=56.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
+|-|+|.|.+|...++-++..|.+|++..++..+....+. .+... .+. .. +.....|++|-|+........+.
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~-~~~-~~----e~~~~~diIi~~v~~~~~~~~~~ 74 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-RTVGV-TET-SE----EDVYSCPVVISAVTPGVALGAAR 74 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-HHHTC-EEC-CH----HHHHTSSEEEECSCGGGHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh-hcccc-ccc-HH----HHHhhcCeEEEEecCchHHHHHH
Confidence 5889999999999999999999999999877766555544 23221 221 11 23346888888888764433333
Q ss_pred Hhhh-cCCEEEEeCCCC
Q 030694 125 GLLK-SQGKLVLLGAPE 140 (173)
Q Consensus 125 ~~l~-~~G~~v~~g~~~ 140 (173)
.... .+..++.++...
T Consensus 75 ~~~~~~~~~~id~st~~ 91 (152)
T d1i36a2 75 RAGRHVRGIYVDINNIS 91 (152)
T ss_dssp HHHTTCCSEEEECSCCC
T ss_pred hhcccCCceeeccCcCC
Confidence 2222 234555555433
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.00028 Score=51.01 Aligned_cols=70 Identities=17% Similarity=0.163 Sum_probs=45.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHHcC--CCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLG--ADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
++|||+|+ |-+|..++..+...|.+|+++++. ..+.+.+..... .-.+.+.. ..+....++|+||.+.+.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHD---VVEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECC---TTSCCCCCCSEEEECCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehH---HHHHHHcCCCEEEECccc
Confidence 68999998 999999999998899999999852 223332322111 11233332 222233489999998764
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=96.84 E-value=0.00098 Score=45.82 Aligned_cols=93 Identities=20% Similarity=0.144 Sum_probs=58.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhcCCccEEEEcCCC--
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSA-- 116 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~-- 116 (173)
..++.+||-+|+| .|..+..++ ..|.+|++++.+++..+.+++..... ..+.....+. ...+.+|+|+..---
T Consensus 18 ~~~~~~VLDiGcG-~G~~~~~l~-~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~--~~~~~fD~I~~~~vleh 93 (225)
T d2p7ia1 18 FFRPGNLLELGSF-KGDFTSRLQ-EHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEH 93 (225)
T ss_dssp GCCSSCEEEESCT-TSHHHHHHT-TTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGG
T ss_pred hCCCCcEEEEeCC-CcHHHHHHH-HcCCeEEEEeCcHHHhhhhhccccccccccccccccc--ccccccccccccceeEe
Confidence 3457789999986 355555554 46889999999999999998855432 2232221111 123479999743222
Q ss_pred ---c-cchHHHH-HhhhcCCEEEEe
Q 030694 117 ---V-HPLMPLI-GLLKSQGKLVLL 136 (173)
Q Consensus 117 ---~-~~~~~~~-~~l~~~G~~v~~ 136 (173)
+ ..+..+. ++|+|||.++..
T Consensus 94 ~~d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 94 IDDPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCceEEEE
Confidence 1 1233455 578999988764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.00065 Score=38.87 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=31.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|.|+|+|-.|++.++.++.+|.++.+.+.+++
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 5799999999999999999999999999997655
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.0041 Score=41.59 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.+.++.|+|.|.+|...+++++..|++|+..++...+.. ... .... .++++....|++.-+++-..
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~------~~~--~~~~---~l~ell~~sDii~i~~plt~~T~ 111 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL------GNA--TQVQ---HLSDLLNMSDVVSLHVPENPSTK 111 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC------TTC--EECS---CHHHHHHHCSEEEECCCSSTTTT
T ss_pred cceEEEEeecccchhhhhhhcccccceEeeccccccchh------hhh--hhhh---hHHHHHhhccceeecccCCcchh
Confidence 578999999999999999999999999999997643210 111 1111 22233445677776665331
Q ss_pred --chHHHHHhhhcCCEEEEeCC
Q 030694 119 --PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~~~~~~~~l~~~G~~v~~g~ 138 (173)
.-.+.+..|+++..+|.++.
T Consensus 112 ~li~~~~l~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 112 NMMGAKEISLMKPGSLLINASR 133 (188)
T ss_dssp TCBCHHHHHHSCTTEEEEECSC
T ss_pred hhccHHHHhhCCCCCEEEEcCc
Confidence 12366677777777777763
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=96.80 E-value=0.00081 Score=48.06 Aligned_cols=36 Identities=33% Similarity=0.364 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
...++|+|+|+|..|+.++..++..|.+|++++.++
T Consensus 28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456799999999999999999999999999999865
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.80 E-value=0.0037 Score=45.43 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=32.0
Q ss_pred CCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHH
Q 030694 43 GMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 82 (173)
Q Consensus 43 g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~ 82 (173)
++..||.|+ .++|++.++.+...|++|+++.+++......
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~ 44 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFM 44 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhh
Confidence 466788894 3899999999999999999998876644433
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.79 E-value=0.0012 Score=45.53 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++.++|+|+|+|..|++++..++..|.+|+++++.
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45568999999999999999999999999999974
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.79 E-value=0.0018 Score=40.21 Aligned_cols=37 Identities=30% Similarity=0.501 Sum_probs=33.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+++++++|+|+|.+|.-++..++..|.+|+++.+.+.
T Consensus 28 ~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 28 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hcCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence 5679999999999999999999999999999998764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=96.79 E-value=0.0036 Score=40.68 Aligned_cols=92 Identities=15% Similarity=0.242 Sum_probs=56.0
Q ss_pred CEEEEEcCChHHH-HHHHHHHHCCC-eEEEEeC-Ccc--hHHHHHHHcCCCEEeeCCChH-HHHHh-cCCccEEEEcCCC
Q 030694 44 MHVGVVGLGGLGH-VAVKFAKAMGV-KVTVIST-SPS--KKSEAVERLGADSFLVSRDQD-EMQAA-MGTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~g~~G~-~a~~~~~~~g~-~v~~~~~-~~~--~~~~~~~~~g~~~v~~~~~~~-~~~~~-~~~~d~vid~~g~ 116 (173)
-++.|+|+|.+|. ...++.+.... +++.+.. +++ ...++++ +|.... +...+ ..... ..++|+||.+++.
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~-~~i~~~--~~~~d~l~~~~~~~~iDiVf~ATpa 81 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-MGVTTT--YAGVEGLIKLPEFADIDFVFDATSA 81 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-TTCCEE--SSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh-cCCccc--ccceeeeeecccccccCEEEEcCCc
Confidence 5799999999986 46677776654 7777754 433 2345555 775533 22222 22222 2379999999997
Q ss_pred ccchHHHH--HhhhcCCEEEEeCC
Q 030694 117 VHPLMPLI--GLLKSQGKLVLLGA 138 (173)
Q Consensus 117 ~~~~~~~~--~~l~~~G~~v~~g~ 138 (173)
..+....+ +.++.|-.++....
T Consensus 82 g~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 82 SAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECST
T ss_pred hhHHHhHHHHHHHHcCCEEEEccc
Confidence 65555443 33555556666654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.78 E-value=0.026 Score=36.10 Aligned_cols=93 Identities=16% Similarity=0.299 Sum_probs=65.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCCcc--hHHHHHHHcCCCEEeeCCCh--HHHHH--------------
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPS--KKSEAVERLGADSFLVSRDQ--DEMQA-------------- 102 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~--g~~v~~~~~~~~--~~~~~~~~~g~~~v~~~~~~--~~~~~-------------- 102 (173)
++|.|+|+ |.+|..+..+.+.. .++|++..-+.+ ++.....+|.+..++-.+.. +.+.+
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~ 82 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD 82 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence 78999999 99999999999886 357777764433 44333344887776554432 11111
Q ss_pred ----h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 103 ----A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 103 ----~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
. ...+|+++.++.+-..+...+..++.|-++...
T Consensus 83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA 121 (150)
T d1r0ka2 83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA 121 (150)
T ss_dssp HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence 1 126999999988887899999999888776544
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.78 E-value=1.4e-07 Score=63.53 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=44.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHh-hCCCCCCCEEEEEcC--ChHHHHHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF-YGLDKPGMHVGVVGL--GGLGHVAVK 60 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~vlI~G~--g~~G~~a~~ 60 (173)
.+|+++++++|++++.+ +++++...|||+++.. ...+++|++|+|.|+ |++|.+++|
T Consensus 115 ~v~~~~~~~iP~~~~~~--~a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 115 LGNDDDFIKLPNPAQSK--ANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp EEEGGGEEEECCHHHHH--HTTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred eehhhhccCCCccchhh--hhccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence 57889999999987544 4456788899988764 456799999999974 678877654
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=96.77 E-value=0.0051 Score=43.34 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=29.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHH
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAV 83 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~ 83 (173)
++|.|+ +++|++.++.+...|++|++.+++. ++.+.+.
T Consensus 5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~ 44 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 44 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 467788 8999999999999999999887654 4444443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.77 E-value=0.0014 Score=40.38 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=32.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++++|+|+|.+|+-+++.++.+|.+|+++.+.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhccccEEEEEeecch
Confidence 47899999999999999999999999999998764
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.77 E-value=0.0014 Score=40.81 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=32.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++++|+|+|.+|+-+++++..+|++|+++.+.+.
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCcceeEEEeccc
Confidence 47999999999999999999999999999998763
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=96.75 E-value=0.00092 Score=46.77 Aligned_cols=96 Identities=16% Similarity=0.075 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EE--eeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~d~vid~ 113 (173)
.+++++||-+|+|. |..+..+++....+|++++.+++.++.+++.. +.. .+ +..+.....-...+.+|+|+..
T Consensus 22 ~~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~ 100 (252)
T d1ri5a_ 22 TKRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 100 (252)
T ss_dssp CCTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence 37899999999873 55566776654458999999999888887643 211 11 1111111000012379999765
Q ss_pred CCCcc----------chHHHHHhhhcCCEEEEe
Q 030694 114 VSAVH----------PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 114 ~g~~~----------~~~~~~~~l~~~G~~v~~ 136 (173)
..... .+..+.+.|+|||+++..
T Consensus 101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 44321 234566889999998764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.72 E-value=0.0021 Score=39.75 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=32.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
..++++|+|+|.+|+-+++..+.+|.+|+++.+.+.
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeecc
Confidence 358899999999999999999999999999998754
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.71 E-value=0.00091 Score=47.31 Aligned_cols=95 Identities=19% Similarity=0.115 Sum_probs=61.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
+++|++||-.|+| +|..++.+++..+++|++++.+++..+.++++. |. -.++..+..+... .+.+|.|+-.
T Consensus 105 ~~~g~~VlD~~aG-~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~--~~~~D~Ii~~ 181 (260)
T d2frna1 105 AKPDELVVDMFAG-IGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILMG 181 (260)
T ss_dssp CCTTCEEEETTCT-TTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEEC
T ss_pred cCCccEEEECcce-EcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc--CCCCCEEEEC
Confidence 4789999999875 344555666655569999999999888887642 32 2344333222211 2368977643
Q ss_pred CC--CccchHHHHHhhhcCCEEEEeC
Q 030694 114 VS--AVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g--~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.. ....+..+++.+++||.+....
T Consensus 182 ~p~~~~~~l~~a~~~l~~gG~lh~~~ 207 (260)
T d2frna1 182 YVVRTHEFIPKALSIAKDGAIIHYHN 207 (260)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCchHHHHHHHHhhcCCCCEEEEEe
Confidence 22 2235668899999999876554
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.71 E-value=0.019 Score=33.39 Aligned_cols=70 Identities=21% Similarity=0.315 Sum_probs=47.7
Q ss_pred CEEEEEcCChHHHH-HHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 44 MHVGVVGLGGLGHV-AVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~g~~G~~-a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++-.+|-|++|.. ++++++..|+.|.+.+..+.......+..|...... .+.+. ..+.|+++-+.+.+.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~g-h~~~~----i~~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVP-HSADN----WYDPDLVIKTPAVRD 72 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESS-CCTTS----CCCCSEEEECTTCCT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEee-ecccc----cCCCCEEEEecCcCC
Confidence 46778898888864 578999999999999988754433344489764322 22222 246899987777664
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.00092 Score=45.84 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---C--EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---D--SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~--~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
..++.+||-+|+| .|..+..+++..+.+|++++.+++-++.+++.+.. . ..+..+..+ .....+.+|+|+...
T Consensus 58 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~-~~~~~~~fD~I~~~~ 135 (222)
T d2ex4a1 58 KTGTSCALDCGAG-IGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD-FTPEPDSYDVIWIQW 135 (222)
T ss_dssp CCCCSEEEEETCT-TTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG-CCCCSSCEEEEEEES
T ss_pred CCCCCEEEEeccC-CCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccc-ccccccccccccccc
Confidence 3667899999987 57677777766667999999999988888875431 1 122221111 111134789998643
Q ss_pred CC-----c---cchHHHHHhhhcCCEEEEeC
Q 030694 115 SA-----V---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~-----~---~~~~~~~~~l~~~G~~v~~g 137 (173)
.- + ..+..+.+.|+|+|.++...
T Consensus 136 ~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~ 166 (222)
T d2ex4a1 136 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 166 (222)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence 32 1 24567788999999988764
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=96.70 E-value=0.0029 Score=45.85 Aligned_cols=96 Identities=13% Similarity=0.080 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC----------CCEEeeCCChHHHHHhcCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG----------ADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g----------~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
...++|||+|+|. |..+..+++... .+|++++.+++=.+.+++.+. ...++..+...++++..+++|+
T Consensus 76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv 154 (312)
T d1uira_ 76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (312)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCcccE
Confidence 4568999998863 445555666554 489999999887777776441 1234544455667666668999
Q ss_pred EEEcC----CCc---------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTV----SAV---------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~----g~~---------~~~~~~~~~l~~~G~~v~~g 137 (173)
||--. +.. .-+..+.++|+++|.++.-.
T Consensus 155 Ii~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~ 195 (312)
T d1uira_ 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (312)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence 97333 211 12456779999999987643
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=96.70 E-value=0.01 Score=40.81 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHh------cCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~------~~~ 106 (173)
...++||-+|.+ +|..++.++++. +.+++.++.+++..+.+++.+ |. -.++.....+.+.++ .+.
T Consensus 58 ~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~ 136 (227)
T d1susa1 58 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 136 (227)
T ss_dssp HTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred cCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence 456899999975 566777777765 469999999999888887744 42 223444445555554 247
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|.+|--.-.. ..++.+++.|++||.++.=..
T Consensus 137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv 171 (227)
T d1susa1 137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT 171 (227)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence 99997433322 246688999999999887653
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0015 Score=46.46 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++..+|+|+|+|..|+.++..++..|.+|++.+.++
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 566789999999999999999999999999998765
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.68 E-value=0.00061 Score=43.98 Aligned_cols=83 Identities=16% Similarity=0.052 Sum_probs=53.9
Q ss_pred EEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHh
Q 030694 47 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGL 126 (173)
Q Consensus 47 lI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~ 126 (173)
-++|+|.+|...++.++..+....+..|+.++.+.+.+..+.. ..+.. +.....|++|-|+... .+...+..
T Consensus 3 gfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~------~~~~~~DiVil~v~d~-~i~~v~~~ 74 (153)
T d2i76a2 3 NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLE------KHPELNGVVFVIVPDR-YIKTVANH 74 (153)
T ss_dssp EEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSC------CCCC---CEEECSCTT-THHHHHTT
T ss_pred EEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchh------hhhccCcEEEEeccch-hhhHHHhh
Confidence 3679999999988877654434467899999999998855532 22211 2344689999999877 58888888
Q ss_pred hhcCC-EEEEeC
Q 030694 127 LKSQG-KLVLLG 137 (173)
Q Consensus 127 l~~~G-~~v~~g 137 (173)
++..+ .++.++
T Consensus 75 l~~~~~ivi~~s 86 (153)
T d2i76a2 75 LNLGDAVLVHCS 86 (153)
T ss_dssp TCCSSCCEEECC
T ss_pred hcccceeeeecc
Confidence 87544 445554
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=96.66 E-value=0.0056 Score=43.43 Aligned_cols=96 Identities=22% Similarity=0.151 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc----C-----CCEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL----G-----ADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~----g-----~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
...++|||+|+|. |..+..+++..+. +|++++-+++=.+.+++.+ + ...++..+...++++...++|++
T Consensus 74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDvI 152 (274)
T d1iy9a_ 74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (274)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCEE
Confidence 4468999998753 4455566665555 8999999998777776643 2 12355555567776666689999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
+--...+ .-++.+-++|+++|.++.-+
T Consensus 153 i~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~ 189 (274)
T d1iy9a_ 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (274)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence 7443332 12567888999999998765
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.66 E-value=0.0014 Score=47.47 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+.++|+|+|||..|+.++..++..|.+|++++.++.
T Consensus 1 k~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 357899999999999999999999999999998864
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.034 Score=35.36 Aligned_cols=95 Identities=24% Similarity=0.130 Sum_probs=61.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHH-HHHc--CCCEE-eeCCChHHHHHhc-CCccEEEEcCCCc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-VERL--GADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~-~~~~--g~~~v-~~~~~~~~~~~~~-~~~d~vid~~g~~ 117 (173)
.++++|+|.|.+|..+++.+...|.+|++++.++++.... .+.. |...+ -|..+++.+++.. ...|.++-+++..
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d 82 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence 3579999999999999999999999999999887654333 2212 33322 2334455554443 4899999998876
Q ss_pred cchH---HHHHhhhcCCEEEEeC
Q 030694 118 HPLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ~~~~---~~~~~l~~~G~~v~~g 137 (173)
..-- ...+.+.|.-+++.--
T Consensus 83 ~~n~~~~~~~r~~~~~~~iia~~ 105 (153)
T d1id1a_ 83 ADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCceEEEE
Confidence 3211 2233445555555543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.62 E-value=0.014 Score=37.11 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=57.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHH----HHH---HcCCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSE----AVE---RLGADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~----~~~---~~g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.+|.|+|+|.+|..++..+...+. ++..++.++++.+- +.+ ..+...+....+.+ ...+.|+++-+.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~----~~~daDvVVita 77 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE----ICRDADMVVITA 77 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG----GGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH----HhhCCcEEEEec
Confidence 468999999999998888877776 89999998876432 222 11222332222222 234789999999
Q ss_pred CCcc---------------ch---HHHHHhhhcCCEEEEeCC
Q 030694 115 SAVH---------------PL---MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 115 g~~~---------------~~---~~~~~~l~~~G~~v~~g~ 138 (173)
|.+. .+ ...+....|.+.++.+.+
T Consensus 78 G~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtN 119 (143)
T d1llda1 78 GPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITN 119 (143)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred ccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9862 11 123334457788877764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.59 E-value=0.0027 Score=40.04 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+++++++|+|+|.+|+-++..++..|.+|+++.+.+.
T Consensus 33 ~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 33 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCEEEEECCchHHHHHHHHHHhhCcceeeeeeccc
Confidence 5679999999999999999999999999999998764
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.58 E-value=0.0015 Score=47.57 Aligned_cols=90 Identities=23% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH---HcCC--C-EEeeCCChHHHHHhcCCccEEEEc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE---RLGA--D-SFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~---~~g~--~-~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
.+|++||-+|+| .|..+..+++ .|+ +|++++.++ ....+++ ..+. . .++..+..+ +......+|+++..
T Consensus 37 ~~~~~VLDlGcG-tG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~-l~~~~~~~D~i~se 112 (328)
T d1g6q1_ 37 FKDKIVLDVGCG-TGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED-VHLPFPKVDIIISE 112 (328)
T ss_dssp HTTCEEEEETCT-TSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT-SCCSSSCEEEEEEC
T ss_pred CCcCEEEEeCCC-CCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh-ccCcccceeEEEEE
Confidence 578999999987 3555554444 676 899999875 3333332 1342 1 233322221 11112479998753
Q ss_pred CCC-----ccc----hHHHHHhhhcCCEEE
Q 030694 114 VSA-----VHP----LMPLIGLLKSQGKLV 134 (173)
Q Consensus 114 ~g~-----~~~----~~~~~~~l~~~G~~v 134 (173)
.-. ... +...-+.|+|||+++
T Consensus 113 ~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 322 112 223347899999875
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=96.55 E-value=0.0029 Score=45.91 Aligned_cols=98 Identities=20% Similarity=0.088 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHh---cCCccEEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAA---MGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~---~~~~d~vid 112 (173)
.+|++||=+++|.-| .++.+++ .+.+|+.++.++..++.++++ .|.+ .++..+..++.+.. .+.||+|+-
T Consensus 144 ~~g~rVLDl~~gtG~-~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~ 221 (318)
T d1wxxa2 144 FRGERALDVFSYAGG-FALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 221 (318)
T ss_dssp CCEEEEEEETCTTTH-HHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeeeccCCCCcH-HHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEE
Confidence 468999999875323 3344554 456999999999998888874 3422 33444434444433 348999985
Q ss_pred cCCCc---------------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 113 TVSAV---------------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 113 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
-.+.- ..+..++++|+|||.++.+....
T Consensus 222 DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~ 264 (318)
T d1wxxa2 222 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 264 (318)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 43321 13457788899999999886543
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.55 E-value=0.025 Score=35.58 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=47.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~ 117 (173)
+|.|.|+ |.+|...++.... .++++.......+....... .+++.++|.+.++...+.. .+..+|+.++|-.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~-~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~ 79 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT 79 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT-TTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc-ccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccc
Confidence 5889998 9999998887665 45676655444344444443 4677788887765433322 3777888888865
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.54 E-value=0.0058 Score=43.39 Aligned_cols=95 Identities=13% Similarity=0.071 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---------------CEEeeCCChHHHHHhcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---------------DSFLVSRDQDEMQAAMG 105 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---------------~~v~~~~~~~~~~~~~~ 105 (173)
...++|||+|+|. |..+-.+++.-..+|++++-+++=.+.+++.++. ..++..+...++++ .+
T Consensus 71 ~~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~ 148 (276)
T d1mjfa_ 71 PKPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 148 (276)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCceEEEecCCc-hHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-cC
Confidence 5568999998752 3333444443334899999998877777764431 13444444556654 46
Q ss_pred CccEEEEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 106 TMDGIIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 106 ~~d~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
++|+||--...+ .-+..+-++|+++|.++.-+
T Consensus 149 ~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~ 190 (276)
T d1mjfa_ 149 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 190 (276)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence 899997433322 12557889999999988754
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.53 E-value=0.0018 Score=44.66 Aligned_cols=36 Identities=31% Similarity=0.304 Sum_probs=32.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++++||.|+ +++|+..++.+...|++|+++++++++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 367899998 899999999999999999999998764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=96.53 E-value=0.0061 Score=43.63 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=47.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC--cch---HHHHHHHcCCCEEe--eCCChHHHHHhcC--CccEEEEcC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS--PSK---KSEAVERLGADSFL--VSRDQDEMQAAMG--TMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~--~~~---~~~~~~~~g~~~v~--~~~~~~~~~~~~~--~~d~vid~~ 114 (173)
+|||.|+ |-+|..+++.+...|.+|+++++- ..+ ...+.. .+.-..+ |-.+.+.+.+... ++|+||.+.
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 6999998 999999999999999999998732 222 223333 3322232 3334455544443 689999998
Q ss_pred CCc
Q 030694 115 SAV 117 (173)
Q Consensus 115 g~~ 117 (173)
+..
T Consensus 81 a~~ 83 (338)
T d1orra_ 81 GQV 83 (338)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.52 E-value=0.0017 Score=40.44 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+..++++|+|+|.+|+-+++..+.+|.+|+++.+++.
T Consensus 23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence 3458999999999999999999999999999998765
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.52 E-value=0.0061 Score=44.96 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=28.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 73 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~ 73 (173)
|++|||.|+ |-+|..+++.+...|.+|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 689999998 9999999999999999999986
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=96.51 E-value=0.0054 Score=40.30 Aligned_cols=95 Identities=15% Similarity=0.289 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcC-------CCEE-------eeCC-----ChHHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLG-------ADSF-------LVSR-----DQDEMQA 102 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g-------~~~v-------~~~~-----~~~~~~~ 102 (173)
+|.|.|-|.+|+++.+.+...+.+++.+-. +.+.+..+.+ +. .+-. ++.. ......+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlk-yDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFK-YDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHH-CCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHh-cccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 578999999999999999888887777753 2345555555 32 1100 1100 0001111
Q ss_pred hc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 103 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 103 ~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+. .++|+|+||+|.-...+.+..++..|.+-+.+..+.
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~ 121 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence 11 189999999998877778888998887666665444
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0037 Score=44.67 Aligned_cols=96 Identities=21% Similarity=0.142 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC---------CCEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG---------ADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g---------~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
...++|||+|+|. |..+-.+++..+. +|++++-+++=.+.+++.+. ...++..+...++++..+++|+|
T Consensus 77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvI 155 (285)
T d2o07a1 77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 155 (285)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCEE
Confidence 4568999998753 4445556665554 89999999887777766331 22344444456666655689999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
|--...+ .-++.+-++|+++|.++.-+
T Consensus 156 i~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 192 (285)
T d2o07a1 156 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 192 (285)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence 7433322 12556778999999988764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0026 Score=39.62 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=32.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++++|+|+|.+|+-++..++.+|.+|+++.+++.
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence 47899999999999999999999999999998753
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.50 E-value=0.035 Score=35.19 Aligned_cols=94 Identities=13% Similarity=0.235 Sum_probs=58.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcC-CCEEee---CCChHHHHHhcCCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLG-ADSFLV---SRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g-~~~v~~---~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+|.|+|+ |.+|..++.++...+. ++..++.++.+.+. .+ +. ...... ........+...+.|+++-+.|.
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~D-l~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~ 78 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-AD-LSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HH-HTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HH-HhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCc
Confidence 47899997 9999999999988886 79999987665433 33 22 111100 01112222334689999999886
Q ss_pred cc---------------chHHH---HHhhhcCCEEEEeCCC
Q 030694 117 VH---------------PLMPL---IGLLKSQGKLVLLGAP 139 (173)
Q Consensus 117 ~~---------------~~~~~---~~~l~~~G~~v~~g~~ 139 (173)
+. .+.+. +..-.|.+.++.++++
T Consensus 79 ~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP 119 (144)
T d1mlda1 79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (144)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 41 12222 2233678899888753
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.50 E-value=0.0064 Score=43.92 Aligned_cols=97 Identities=22% Similarity=0.156 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~v 110 (173)
...++|||+|+|. |..+-.+++.... +|++++-+++=.+.+++.+.. ..++..+...++++..+.+|+|
T Consensus 105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDvI 183 (312)
T d2b2ca1 105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 183 (312)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCEE
Confidence 4467899998763 3344456665554 899999998888878774431 1233333346666655689999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|--...+ .-++.+-++|+++|.++.-+.
T Consensus 184 I~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~ 221 (312)
T d2b2ca1 184 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 221 (312)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence 8443332 124567789999999998764
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.50 E-value=0.0019 Score=43.31 Aligned_cols=39 Identities=23% Similarity=0.323 Sum_probs=33.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
+|.|+|.|-+|+.++..+ +.|.+|++++.++++.+.+++
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence 688999999999887655 579999999999998888765
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.48 E-value=0.0028 Score=38.83 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=31.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++++|+|+|.+|+-+++.++.+|.+|+++.+.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhcccceEEEeeecc
Confidence 48999999999999999999999999999988754
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0054 Score=42.02 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-----cCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-----MGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-----~~~~ 107 (173)
...++||-+|.+ .|..+..++++. +.+++.++.+++..+.+++.+ |.. .+......+.+.+. .+.+
T Consensus 58 ~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f 136 (219)
T d2avda1 58 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 136 (219)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence 457899999975 466667777765 459999999999877777643 421 22333333444333 2379
Q ss_pred cEEEEcCCCc---cchHHHHHhhhcCCEEEEeCC
Q 030694 108 DGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 108 d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|.+|--..-. ..++.+++.|++||.++.-..
T Consensus 137 D~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~ 170 (219)
T d2avda1 137 DVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 170 (219)
T ss_dssp EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 9997554433 236688999999999987654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.48 E-value=0.0029 Score=44.27 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=42.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcC--CccEEEEcCCCc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--~~d~vid~~g~~ 117 (173)
+|||+|+ |-+|..++..++..|.+|+.+++++- |-.+.+.+.+... ++|+++.+.+..
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~---------------D~~d~~~~~~~l~~~~~d~vih~a~~~ 63 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDL---------------DITNVLAVNKFFNEKKPNVVINCAAHT 63 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTC---------------CTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhc---------------cCCCHHHHHHHHHHcCCCEEEeecccc
Confidence 6999998 99999999999999999999987641 2233333333332 678888887764
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=96.48 E-value=0.0028 Score=39.55 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+..++++|+|+|.+|+-+++..+.+|.+|+++.+.+.
T Consensus 24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 4468999999999999999999999999999988753
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.47 E-value=0.0024 Score=39.68 Aligned_cols=33 Identities=27% Similarity=0.282 Sum_probs=30.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.++++|+|+|.+|+-.+++++.+|.+|+++.++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence 467999999999999999999999999999864
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=96.45 E-value=0.016 Score=41.87 Aligned_cols=74 Identities=15% Similarity=0.109 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHH--HHHHcCCCEEe--eCCC-hHHHHHhcCCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AVERLGADSFL--VSRD-QDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~--~~~~~g~~~v~--~~~~-~~~~~~~~~~~d~vid~~g 115 (173)
+.++|+|+|+ |.+|..++..+...|.+|+++.|+.++... +.. ...-.++ |..+ .+.+.....+.|.++....
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcc-cCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 4688999998 999999999999999999999998765432 222 2222233 2222 3456666778888886655
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 81 ~ 81 (350)
T d1xgka_ 81 S 81 (350)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=96.45 E-value=0.075 Score=37.43 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=64.2
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCChH----------------
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRDQD---------------- 98 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~---------------- 98 (173)
+.+.++.+|+...+|..|.+++..++.+|.+++++.. ++.|.+.++. +|++.++...+.+
T Consensus 55 g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~GA~v~~v~~~~~~~~a~~~~~~~~~~~~ 133 (292)
T d2bhsa1 55 GEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRA-YGAELILVTKEQGMEGARDLALEMANRGE 133 (292)
T ss_dssp TSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHH-TTCEEEEECTTTHHHHHHHHHHHHHHHTS
T ss_pred CCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHH-hCCCcceeecccchHHHHHHHhhcccccc
Confidence 4445566666666799999999999999996666654 4556777777 8987544333210
Q ss_pred -----------------------HHHHhcCCccEEEEcCCCccchH---HHHHhhhcCCEEEEeC
Q 030694 99 -----------------------EMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 99 -----------------------~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 137 (173)
..+++.+.+|.++-++|+...+. ..++...+..+++.+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve 198 (292)
T d2bhsa1 134 GKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ 198 (292)
T ss_dssp SEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred ccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence 11111236999999999875444 4445556667776554
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=96.44 E-value=0.0016 Score=44.56 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~ 76 (173)
+|+|+|+|..|+.++..++..|. +|+++++++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 48999999999999999999997 699999865
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=96.43 E-value=0.0065 Score=42.53 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH------HHHHHH--cCCCEEe--eCCChHHHHHhcCCccEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK------SEAVER--LGADSFL--VSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~------~~~~~~--~g~~~v~--~~~~~~~~~~~~~~~d~vi 111 (173)
.++|||+|+ |-+|..++..+...|.+|++++|+.... ..+... .+. .++ |..+.....+...+.+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccchhhhhhhhhceeee
Confidence 467999998 9999999999999999999999875532 222221 122 233 2233344444445888999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
.+.+..
T Consensus 82 ~~~~~~ 87 (307)
T d1qyca_ 82 STVGSL 87 (307)
T ss_dssp ECCCGG
T ss_pred eccccc
Confidence 888765
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.42 E-value=0.0015 Score=46.22 Aligned_cols=33 Identities=15% Similarity=0.385 Sum_probs=30.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.|+|+|+|+.|++++..++..|.+|+++++.++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 489999999999999999999999999998763
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0065 Score=43.95 Aligned_cols=72 Identities=17% Similarity=0.068 Sum_probs=48.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC----cchHHHHHHHc--CCCEE-eeCCChHHHHHhcC--CccEEEEcC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----PSKKSEAVERL--GADSF-LVSRDQDEMQAAMG--TMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~----~~~~~~~~~~~--g~~~v-~~~~~~~~~~~~~~--~~d~vid~~ 114 (173)
+|||+|+ |-+|..++..+...|.+|+++++. .+......... +...+ .|-.+.+.+.+... ++|+||.+.
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA 81 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence 6999998 999999999999999999999752 22223222211 12221 23345555555543 899999988
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
+.
T Consensus 82 a~ 83 (338)
T d1udca_ 82 GL 83 (338)
T ss_dssp SC
T ss_pred Cc
Confidence 64
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.40 E-value=0.024 Score=36.06 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=57.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHH-H------HcCCCEEeeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAV-E------RLGADSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~-~------~~g~~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
...+|.|+|+|.+|..++..+...|. +++.++.++++.+-.. + ..+...+. ..+.+ ...+.|+++-
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~-~~d~~----~~~~adivvi 78 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SGEYS----DCKDADLVVI 78 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-ECCGG----GGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe-eccHH----HhccccEEEE
Confidence 35689999999999998888777763 8999999887543211 1 01222222 22222 2358999999
Q ss_pred cCCCcc---------------chHH---HHHhhhcCCEEEEeCC
Q 030694 113 TVSAVH---------------PLMP---LIGLLKSQGKLVLLGA 138 (173)
Q Consensus 113 ~~g~~~---------------~~~~---~~~~l~~~G~~v~~g~ 138 (173)
+.|.+. .+.. .+..-.|.+.++.+.+
T Consensus 79 tag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtN 122 (146)
T d1ez4a1 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (146)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCC
Confidence 998762 1122 2333456788877764
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.39 E-value=0.022 Score=36.74 Aligned_cols=86 Identities=19% Similarity=0.206 Sum_probs=56.5
Q ss_pred EEEEEcCChHHHH-HHHHHHHC-CCeEEEE-eCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 45 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~-a~~~~~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
++.|+|+|.+|.- .....+.. +++++++ ++++++.+.+.+.++... . +. .+++...+|+|+-|++.....+
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~--~~---~~~l~~~~D~V~I~tp~~~h~~ 76 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A--DS---LSSLAASCDAVFVHSSTASHFD 76 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C--SS---HHHHHTTCSEEEECSCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c--cc---chhhhhhcccccccccchhccc
Confidence 6889999999864 55555554 5676655 577777777766677542 2 22 2233457999999999876666
Q ss_pred HHHHhhhcCCEEEEeC
Q 030694 122 PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 122 ~~~~~l~~~G~~v~~g 137 (173)
.+..+++.| .-+++.
T Consensus 77 ~~~~al~~g-k~V~~E 91 (164)
T d1tlta1 77 VVSTLLNAG-VHVCVD 91 (164)
T ss_dssp HHHHHHHTT-CEEEEE
T ss_pred ccccccccc-ceeecc
Confidence 666666655 445554
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.39 E-value=0.0017 Score=42.86 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHhhCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH--cCCCEE-
Q 030694 25 CAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER--LGADSF- 91 (173)
Q Consensus 25 ~~~~ta~~~l~~~~~---------~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~--~g~~~v- 91 (173)
|+....+..+..+.. --.|++++|+|. .-+|.=++.++...|++|+....+.......... .....+
T Consensus 2 cTp~gv~~LL~~y~I~~~~~~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~ 81 (171)
T d1edza1 2 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVE 81 (171)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEE
T ss_pred CcHHHHHHHHHHcCcccccccccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccc
Confidence 444444555565543 357999999998 5789988889888999998776543211000000 001111
Q ss_pred -eeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 92 -LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 92 -~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.....+.+++.....|+++.++|.+.. .---+.+++|..++.+|...
T Consensus 82 ~~~~~~~~~lk~~~~~aDIvIsavG~p~~-~i~~d~ik~GavvIDvGi~~ 130 (171)
T d1edza1 82 DLGEYSEDLLKKCSLDSDVVITGVPSENY-KFPTEYIKEGAVCINFACTK 130 (171)
T ss_dssp EEEECCHHHHHHHHHHCSEEEECCCCTTC-CBCTTTSCTTEEEEECSSSC
T ss_pred cccccchhHHhhccccCCEEEEccCCCcc-ccChhhcccCceEeeccccc
Confidence 1112234455555579999999998852 11224578899999998643
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.39 E-value=0.0011 Score=42.55 Aligned_cols=47 Identities=6% Similarity=-0.061 Sum_probs=26.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHH-HhhCCCCCCCEEEE
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPL-RFYGLDKPGMHVGV 48 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~vlI 48 (173)
+++.+.++++|+++++++++++.....+++.+. .....+++|++|||
T Consensus 99 ~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI 146 (147)
T d1qora1 99 NIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146 (147)
T ss_dssp EEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred EEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence 578899999999998875542211000000000 00134599999998
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.39 E-value=0.0018 Score=46.87 Aligned_cols=91 Identities=22% Similarity=0.153 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH---HcCC-C--EEeeCCChHHHHHhcCCccEEEE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE---RLGA-D--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~---~~g~-~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
+.+|++||-+|+|. |..+..+++ .|+ +|++++.++. ...+++ ..+. + .++..+..+ +......+|+++.
T Consensus 31 ~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~-~~~~~~~~D~ivs 106 (316)
T d1oria_ 31 LFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIIS 106 (316)
T ss_dssp HHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEE
T ss_pred cCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHH-cccccceeEEEee
Confidence 35799999999873 666655555 676 7999998764 333322 1232 1 233322221 1111247999875
Q ss_pred cCCCc-----cc----hHHHHHhhhcCCEEE
Q 030694 113 TVSAV-----HP----LMPLIGLLKSQGKLV 134 (173)
Q Consensus 113 ~~g~~-----~~----~~~~~~~l~~~G~~v 134 (173)
..... .. +...-+.|+|+|+++
T Consensus 107 ~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 107 EWMGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 43321 12 234457899999876
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.37 E-value=0.0027 Score=44.21 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=29.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS 77 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~ 77 (173)
+|+|+|+|+.|+.++.+++..|. +|++++++++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999999999999999997 8999988754
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.37 E-value=0.026 Score=35.09 Aligned_cols=87 Identities=13% Similarity=0.183 Sum_probs=50.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~ 117 (173)
+|.|.|+ |.+|....+++...+.+++.. +.+.... + -..+.++|.+.++...+.. .+..+|+.++|-.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~--~---~~~DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG~~ 76 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE--L---DSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALK 76 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE--C---SCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCSCC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH--h---ccCCEEEEecCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 6899998 999999999999999876654 3322110 0 1255666666654333322 1566666666654
Q ss_pred cchHHHHHhhhcCCEEEEe
Q 030694 118 HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~ 136 (173)
....+.++.+++.-.++..
T Consensus 77 ~~~~~~i~~~ak~~pv~~a 95 (128)
T d1vm6a3 77 EEHLQMLRELSKEVPVVQA 95 (128)
T ss_dssp HHHHHHHHHHTTTSEEEEC
T ss_pred HHHHHHHHHHHhhCCEEee
Confidence 3333444444444444333
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=96.35 E-value=0.0078 Score=43.99 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHCCC-eEEEEeCCcchHHHHHHHcCCC---EEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~-~~~g~-~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+..+++.|+|+|..+..-++.. ..++. +|.+.++++++.+.+.+++... .+... +..++...+.|+++-|+.
T Consensus 126 ~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~---~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 126 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA---SSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC---SSHHHHHTTCSEEEECCC
T ss_pred cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec---CCHHHHHhcCCceeeccc
Confidence 6678999999998888766644 45666 8999999988777666545421 22222 223345668999998886
Q ss_pred Ccc---chHHHHHhhhcCCEEEEeCCCC-CCcccCcc
Q 030694 116 AVH---PLMPLIGLLKSQGKLVLLGAPE-KPLELPAF 148 (173)
Q Consensus 116 ~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~ 148 (173)
.+. .+.. ..++||-.+..+|... +...++..
T Consensus 203 s~s~~Pv~~~--~~l~pG~hI~aiGs~~p~~~Eld~~ 237 (340)
T d1x7da_ 203 DKAYATIITP--DMLEPGMHLNAVGGDCPGKTELHAD 237 (340)
T ss_dssp CSSEEEEECG--GGCCTTCEEEECSCCBTTBEEECHH
T ss_pred cCCCCcccch--hhcCCCCEEeecccchhhhhccCHH
Confidence 542 2332 4689999999998654 33455543
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.35 E-value=0.035 Score=34.98 Aligned_cols=91 Identities=14% Similarity=0.241 Sum_probs=55.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc------CCCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL------GADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~------g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+|.|+|+|.+|..++..+...+. ++...+.++++.+.....+ -....+...+.+ ...+.|+++-+.|.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~----~~~~adivvitag~ 77 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA----DLKGSDVVIVAAGV 77 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG----GGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH----HhcCCCEEEEeccc
Confidence 68899999999888776666664 8999998877543221111 111122211211 24589999999987
Q ss_pred cc---------------c---hHHHHHhhhcCCEEEEeCCC
Q 030694 117 VH---------------P---LMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 117 ~~---------------~---~~~~~~~l~~~G~~v~~g~~ 139 (173)
+. . +-..+...+|.+.++.+.++
T Consensus 78 ~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNP 118 (140)
T d1a5za1 78 PQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (140)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred ccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCc
Confidence 51 1 12334445678888887643
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.31 E-value=0.0038 Score=38.63 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+.+++++|+|+|.+|+-++..++..|.+|+++.+.+.
T Consensus 30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred hcCCcEEEECCcHHHHHHHHHhhcccceEEEEecccc
Confidence 3468999999999999999999999999999988753
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=96.31 E-value=0.0018 Score=45.33 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=29.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
+|+|+|+|..|+.++..++..|.+|+++++++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 58999999999999999999999999999864
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=96.29 E-value=0.0026 Score=44.27 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
.|+|+|+|+.|++++..+...|.+|.++++++.-
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3899999999999999999999999999987653
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=96.29 E-value=0.0057 Score=43.85 Aligned_cols=97 Identities=15% Similarity=0.099 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC---------CCEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG---------ADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g---------~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
..-++|||+|+|. |..+-.+++..+. +|++++-+++=.+.+++.+. .-.++..+...++++..+.+|++
T Consensus 88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI 166 (295)
T d1inla_ 88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 166 (295)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEE
Confidence 3458999998753 3344555665554 89999999887777766332 11344444455555555689999
Q ss_pred EEcCCCc-----------cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVSAV-----------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g~~-----------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|--...+ .-+..+.++|+++|.++.-..
T Consensus 167 i~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~ 205 (295)
T d1inla_ 167 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 205 (295)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence 7332211 125577899999999987653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=96.27 E-value=0.0027 Score=43.77 Aligned_cols=32 Identities=28% Similarity=0.277 Sum_probs=29.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
|+|+|+|+.|+.++..+...|.+|+++++++.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 78999999999999999999999999998754
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=96.27 E-value=0.0046 Score=43.90 Aligned_cols=96 Identities=23% Similarity=0.243 Sum_probs=64.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHcC---CCE-EeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERLG---ADS-FLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~g---~~~-v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+.+..+||-+|+| .|..+..+++.. +.+|++++.+++..+.+++... .+. ....+..+ . ...+.+|+|+.
T Consensus 24 ~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~-~-~~~~~fD~v~~ 100 (281)
T d2gh1a1 24 KITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE-I-ELNDKYDIAIC 100 (281)
T ss_dssp CCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTT-C-CCSSCEEEEEE
T ss_pred ccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccc-c-cccCCceEEEE
Confidence 44677899999987 477777777764 5689999999998888876432 221 12111111 1 12347999986
Q ss_pred cCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
...-. ..+..+.+.|+|||.++..-
T Consensus 101 ~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 101 HAFLLHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp ESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 54322 24678889999999988764
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.25 E-value=0.029 Score=35.70 Aligned_cols=69 Identities=26% Similarity=0.378 Sum_probs=44.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHH----HHHH---cCCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSE----AVER---LGADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~----~~~~---~g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
++|.|+|+|.+|..++..+...|. +++.++.++++.+- +.+. ++....+...+.+ ...+.|+++-+.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~----~l~~adiVVita 77 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA----ALADADVVISTL 77 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG----GGTTCSEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH----HhccccEEEEec
Confidence 689999999999888887777664 89999998876322 1211 1222222222222 235899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 78 G~ 79 (146)
T d1hyha1 78 GN 79 (146)
T ss_dssp SC
T ss_pred cc
Confidence 85
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=96.23 E-value=0.017 Score=39.96 Aligned_cols=77 Identities=26% Similarity=0.398 Sum_probs=50.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc-------------------hHHHHHHH---cCC-CEEeeCC--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAVER---LGA-DSFLVSR-- 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~~~---~g~-~~v~~~~-- 95 (173)
.+.+|+|+|+|++|..++..+.+.|. ++++++.+.- |.+.+++. +.. ..+....
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~ 108 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 108 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence 35799999999999999999999999 8888875521 22222221 222 1221111
Q ss_pred -ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 -~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
......+....+|+++|+.....
T Consensus 109 ~~~~~~~~~~~~~divid~~d~~~ 132 (247)
T d1jw9b_ 109 LDDAELAALIAEHDLVLDCTDNVA 132 (247)
T ss_dssp CCHHHHHHHHHTSSEEEECCSSHH
T ss_pred hhhccccccccccceeeeccchhh
Confidence 12333444458999999998763
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.21 E-value=0.047 Score=35.25 Aligned_cols=95 Identities=14% Similarity=0.230 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHH-HHHH------HcCCCEEeeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKS-EAVE------RLGADSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~-~~~~------~~g~~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
.+..+|.|+|+|.+|..++..+...|. ++..++.++++.+ ++.+ ..+...++...+.+ ...+.|+++
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~----~~~~adiVV 93 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS----VTANSKIVV 93 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG----GGTTCSEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh----hcccccEEE
Confidence 456799999999999999999888886 8999999876542 1211 01222222222222 244899999
Q ss_pred EcCCCcc---------------chHHHH---HhhhcCCEEEEeCCC
Q 030694 112 DTVSAVH---------------PLMPLI---GLLKSQGKLVLLGAP 139 (173)
Q Consensus 112 d~~g~~~---------------~~~~~~---~~l~~~G~~v~~g~~ 139 (173)
-+.|.+. .+.... .-..|.|.++.+.++
T Consensus 94 itAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNP 139 (160)
T d1i0za1 94 VTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139 (160)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence 9999762 122222 233567888888643
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.20 E-value=0.052 Score=34.19 Aligned_cols=91 Identities=12% Similarity=0.105 Sum_probs=58.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc-------C-CCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-------G-ADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-------g-~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+|.|+|+|.+|..++..+...+. ++...+.++++.+.....+ . ...+....+.+ ...+.|+++-+.
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~----~~~dadvvvita 77 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA----DTANSDIVIITA 77 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG----GGTTCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHH----HhcCCeEEEEEE
Confidence 58899999999998888888874 8999999887654332111 1 12232222222 235899999999
Q ss_pred CCcc---------------chH---HHHHhhhcCCEEEEeCCC
Q 030694 115 SAVH---------------PLM---PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~---------------~~~---~~~~~l~~~G~~v~~g~~ 139 (173)
|.+. .+. ..+....|.+.++.++++
T Consensus 78 g~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNP 120 (142)
T d1guza1 78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 (142)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSS
T ss_pred ecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCC
Confidence 8641 112 233334588888887643
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.12 Score=37.56 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=65.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCC--------h---------
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRD--------Q--------- 97 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~--------~--------- 97 (173)
+.+++++.|+...+|..|.+++..|+.+|.+++++.. +++|.+.++. +|++.+..... .
T Consensus 92 g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~-~GA~vv~v~~~~~~~~~~~~~~~~~~~~~ 170 (355)
T d1jbqa_ 92 GTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRA-LGAEIVRTPTNARFDSPESHVGVAWRLKN 170 (355)
T ss_dssp TCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHH-TTCEEEECCC-------CCHHHHHHHHHH
T ss_pred CCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHh-cCCeEEEecccccchhhhhhhhHHHHHHH
Confidence 3445667666666799999999999999997776654 3557777777 99875432211 0
Q ss_pred --------------------------HHHHHhcCCccEEEEcCCCccchH---HHHHhhhcCCEEEEeC
Q 030694 98 --------------------------DEMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 98 --------------------------~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 137 (173)
+...++.+.+|.++-++|+...+. ..++...+.-+++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve 239 (355)
T d1jbqa_ 171 EIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD 239 (355)
T ss_dssp HSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence 011222347999999999875444 4445556677877664
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=96.19 E-value=0.042 Score=35.96 Aligned_cols=88 Identities=19% Similarity=0.223 Sum_probs=58.5
Q ss_pred EEEEEcCChHHHH-HHHHHHHCC--CeEEE-EeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-cCCccEEEEcCCCccc
Q 030694 45 HVGVVGLGGLGHV-AVKFAKAMG--VKVTV-ISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~-a~~~~~~~g--~~v~~-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~~~ 119 (173)
++.|+|+|.+|.. .....+..+ +++++ .++++++.+.+.+.++...+++ +.+.+ + ...+|.++-|++...+
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~~~el--l~~~~id~v~I~tp~~~h 80 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--SYEEL--LESGLVDAVDLTLPVELN 80 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--CHHHH--HHSSCCSEEEECCCGGGH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--eeecc--ccccccceeecccccccc
Confidence 6889999999864 466666543 36664 4677777777766688665532 22221 2 2479999999998866
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
.+.+..++..| .-+++.
T Consensus 81 ~~~~~~al~~g-k~V~~E 97 (181)
T d1zh8a1 81 LPFIEKALRKG-VHVICE 97 (181)
T ss_dssp HHHHHHHHHTT-CEEEEE
T ss_pred ccccccccccc-hhhhcC
Confidence 66666666654 556664
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.19 E-value=0.0033 Score=42.61 Aligned_cols=31 Identities=26% Similarity=0.198 Sum_probs=29.0
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++..+...|.+|.++++++
T Consensus 8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 8899999999999999999999999999975
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=96.18 E-value=0.032 Score=38.91 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=33.5
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
+.....--.|.+|+|.|.|.+|..+++.+...|++|+++.-
T Consensus 27 ~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 27 MKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp HHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEec
Confidence 33433335789999999999999999999999999887753
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.18 E-value=0.013 Score=41.90 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC---------CCEEeeCCChHHHHHhcC-CccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG---------ADSFLVSRDQDEMQAAMG-TMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g---------~~~v~~~~~~~~~~~~~~-~~d~ 109 (173)
..-++|||+|+|. |..+-.+++..+. +|++++-+++=.+.+++.+. ...++..+....+.+..+ .+|+
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv 157 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 157 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence 4457999998753 3344456665565 89999999887777776331 123444444566655543 7998
Q ss_pred EEEcCCCc----------cchHHHHHhhhcCCEEEEeCC
Q 030694 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|--...+ .-++.+-++|+++|.++.-..
T Consensus 158 Ii~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~ 196 (290)
T d1xj5a_ 158 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 196 (290)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence 87433332 125577899999999988653
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.0086 Score=43.70 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=45.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-----hHHHHHHH---cCCC-EE--eeCCChHHHHHhcC--CccE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEAVER---LGAD-SF--LVSRDQDEMQAAMG--TMDG 109 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-----~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~--~~d~ 109 (173)
+.+||.|+ |-+|..+++.+...|.+|+++++... +.+.+... .... .. .|-.+.+.+.+... ++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 67899998 99999999999999999999998532 22222221 1111 11 12234455555444 6899
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
++.+.+..
T Consensus 82 v~h~aa~~ 89 (357)
T d1db3a_ 82 VYNLGAMS 89 (357)
T ss_dssp EEECCCCC
T ss_pred EEEeeccc
Confidence 99998753
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.15 E-value=0.028 Score=40.55 Aligned_cols=99 Identities=14% Similarity=0.223 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+..+++.|+|+|..+..-++.... +.. +|.++.+++++.+.+.+.+ +..... +..+ ...+.|+++.|+.
T Consensus 123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~--~~~~----a~~~aDiV~taT~ 196 (320)
T d1omoa_ 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV--QPAE----EASRCDVLVTTTP 196 (320)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE--CCHH----HHTSSSEEEECCC
T ss_pred CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc--chhh----hhccccEEEEecc
Confidence 667899999999999887776554 455 8999999998876665533 333222 1222 2357999999998
Q ss_pred CccchHHHHHhhhcCCEEEEeCCCCC-CcccC
Q 030694 116 AVHPLMPLIGLLKSQGKLVLLGAPEK-PLELP 146 (173)
Q Consensus 116 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~ 146 (173)
....+- -...+++|-.+..+|.... ...++
T Consensus 197 s~~P~~-~~~~l~~G~hv~~iGs~~p~~~Eld 227 (320)
T d1omoa_ 197 SRKPVV-KAEWVEEGTHINAIGADGPGKQELD 227 (320)
T ss_dssp CSSCCB-CGGGCCTTCEEEECSCCSTTCCCBC
T ss_pred Cccccc-chhhcCCCCeEeecCCccccccccC
Confidence 763221 1245899999999997543 33444
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.0015 Score=43.47 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++..|+|+|+|+.|+.++..+.+.|.+|+++++..
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEeec
Confidence 45679999999999999999999999999997643
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.13 E-value=0.0045 Score=42.97 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=30.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+.|+|.|+ +++|++.++.+...|++|++++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 45788898 89999999999999999999998754
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=96.12 E-value=0.022 Score=37.41 Aligned_cols=95 Identities=14% Similarity=0.221 Sum_probs=56.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC----CeEEEEeC--CcchHHHHHHHcC-------CCE-------EeeCCC-----hHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG----VKVTVIST--SPSKKSEAVERLG-------ADS-------FLVSRD-----QDE 99 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g----~~v~~~~~--~~~~~~~~~~~~g-------~~~-------v~~~~~-----~~~ 99 (173)
+|.|.|-|-+|+++.+.+...+ .+|+.+.. +.+.+..+.+ +. ... +++... ...
T Consensus 3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~ 81 (173)
T d1obfo1 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTR-YDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN 81 (173)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhc-ccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence 5889999999999998876543 34555542 3333444444 21 110 111000 011
Q ss_pred HHHhc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 100 MQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 100 ~~~~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..++. -++|+|+||+|.-.....+..+|..|.+-|.++.+.
T Consensus 82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~ 125 (173)
T d1obfo1 82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (173)
T ss_dssp GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence 11222 289999999998666778889998887666665443
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.11 E-value=0.034 Score=37.24 Aligned_cols=75 Identities=24% Similarity=0.262 Sum_probs=51.4
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEE
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
+...+. -.|++||-+|+|. |..++. +...|+ +|++++.+++..+.++++.....++..+- .++.+.+|+||.
T Consensus 41 ~~~~~d-l~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~----~~l~~~fD~Vi~ 113 (197)
T d1ne2a_ 41 IYNDGN-IGGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV----SEISGKYDTWIM 113 (197)
T ss_dssp HHHHTS-SBTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG----GGCCCCEEEEEE
T ss_pred HHHcCC-CCCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEeh----hhcCCcceEEEe
Confidence 344455 5699999999863 444444 444676 79999999999998888665445554332 234568999997
Q ss_pred cCC
Q 030694 113 TVS 115 (173)
Q Consensus 113 ~~g 115 (173)
.-+
T Consensus 114 NPP 116 (197)
T d1ne2a_ 114 NPP 116 (197)
T ss_dssp CCC
T ss_pred Ccc
Confidence 644
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=96.11 E-value=0.0056 Score=42.67 Aligned_cols=97 Identities=22% Similarity=0.140 Sum_probs=60.2
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCC-C--EEeeCCChHHHHHhcCCccE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGA-D--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~-~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
...+....+||-+|+| .|..+..+++.. +.++++++. ++..+.+++. .|. + ..+.. +..+....++|+
T Consensus 75 ~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~---D~~~~~~~~~D~ 149 (253)
T d1tw3a2 75 AYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG---DFFEPLPRKADA 149 (253)
T ss_dssp HSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC---CTTSCCSSCEEE
T ss_pred hcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc---cchhhcccchhh
Confidence 3345677899999987 577888888877 458888886 4444545442 231 1 12211 111122347899
Q ss_pred EEEcCCC-----c---cchHHHHHhhhcCCEEEEeCC
Q 030694 110 IIDTVSA-----V---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 110 vid~~g~-----~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
++-..-- + ..+..+.+.|+|||+++....
T Consensus 150 v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 150 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 8744321 1 236678899999999988753
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=96.11 E-value=0.015 Score=38.04 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC-CEEeeCCChHHHHH---hcCCccEE
Q 030694 40 DKPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA-DSFLVSRDQDEMQA---AMGTMDGI 110 (173)
Q Consensus 40 ~~~g~~vlI~G~--g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~-~~v~~~~~~~~~~~---~~~~~d~v 110 (173)
+.+|.+||=.++ |.+| +. +...|++|+.++.+++..+.++++ +|. ..+........... ....+|++
T Consensus 39 ~~~g~~vLDl~~G~G~~~---i~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~I 114 (171)
T d1ws6a1 39 YPRRGRFLDPFAGSGAVG---LE-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp CTTCCEEEEETCSSCHHH---HH-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred ccCCCeEEEeccccchhh---hh-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCcccee
Confidence 367889998876 4444 33 334689999999999988777653 443 34544443332222 23479999
Q ss_pred EEcC----CCccchHHHH--HhhhcCCEEEEe
Q 030694 111 IDTV----SAVHPLMPLI--GLLKSQGKLVLL 136 (173)
Q Consensus 111 id~~----g~~~~~~~~~--~~l~~~G~~v~~ 136 (173)
|-.- +....+..++ ..++++|.++.-
T Consensus 115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie 146 (171)
T d1ws6a1 115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred EEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence 8432 2222233333 347888877654
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=96.10 E-value=0.0048 Score=39.99 Aligned_cols=35 Identities=37% Similarity=0.435 Sum_probs=30.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSP 76 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~ 76 (173)
.|++|+|+|+|..|+.+++.++..+. +|+++++++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 37899999999999999999888875 788888765
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=96.09 E-value=0.022 Score=37.22 Aligned_cols=95 Identities=16% Similarity=0.271 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeC---CcchHHHHHHHcC-------CC------EE-eeCCC-----hHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIST---SPSKKSEAVERLG-------AD------SF-LVSRD-----QDEMQ 101 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~---~~~~~~~~~~~~g-------~~------~v-~~~~~-----~~~~~ 101 (173)
+|.|.|-|.+|+++.+++.... .+++.+-. +.+.+..+.+ +. .+ .+ ++... .....
T Consensus 3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~ 81 (169)
T d1u8fo1 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ-YDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 81 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHh-hccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence 6889999999999998877664 57776643 2344555555 22 11 00 11000 00111
Q ss_pred Hhc--C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 102 AAM--G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 102 ~~~--~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++. . ++|+++||+|.-.....+..++..|.+-+.++.+.
T Consensus 82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~ 123 (169)
T d1u8fo1 82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 123 (169)
T ss_dssp GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence 222 1 89999999998766777778888887666665444
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.08 E-value=0.029 Score=34.66 Aligned_cols=91 Identities=12% Similarity=0.136 Sum_probs=62.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhc-CCccEEEEcCCCccc--
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~-~~~d~vid~~g~~~~-- 119 (173)
++++|+|.|.+|..+++.++ +.++++++.++++.+.+.. .|...+ -|..+++.+++.. ...+.++-++.....
T Consensus 1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~ 77 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETI 77 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhH
Confidence 46889999999998888764 5578889999999888877 675433 2344455554432 489999988887631
Q ss_pred -hHHHHHhhhcCCEEEEeC
Q 030694 120 -LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 -~~~~~~~l~~~G~~v~~g 137 (173)
.-...+.+.|..+++...
T Consensus 78 ~~~~~~r~~~~~~~iia~~ 96 (129)
T d2fy8a1 78 HCILGIRKIDESVRIIAEA 96 (129)
T ss_dssp HHHHHHHHHCSSSCEEEEC
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 123445566776666554
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.08 E-value=0.031 Score=36.40 Aligned_cols=95 Identities=16% Similarity=0.281 Sum_probs=58.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeC---CcchHHHHHHHcC-------CCE------E-e--------eCCChH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIST---SPSKKSEAVERLG-------ADS------F-L--------VSRDQD 98 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~---~~~~~~~~~~~~g-------~~~------v-~--------~~~~~~ 98 (173)
+|.|.|-|.+|+++.+.+.... .+++.+-- +.+.+..+.+ +. .+. + + ..+++.
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~ 80 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLK-YDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS 80 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhh-cccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence 5789999999999999887653 46666642 2345555655 32 110 1 1 111111
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.=-..++|+|+||+|.-...+.+..++..|.+-|.++.+.
T Consensus 81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 122 (166)
T d2b4ro1 81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 122 (166)
T ss_dssp GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence 100001189999999998766777888998887555555443
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=96.07 E-value=0.0036 Score=41.06 Aligned_cols=31 Identities=23% Similarity=0.431 Sum_probs=28.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.|+|+|+|+.|+.++..+.+.|.+|.++++.
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence 4889999999999999999999999999853
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.06 E-value=0.0037 Score=42.24 Aligned_cols=31 Identities=35% Similarity=0.362 Sum_probs=28.6
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|+.|+.++..+...|.+|+++++.+
T Consensus 6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 7899999999999999999999999998754
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.06 E-value=0.021 Score=40.54 Aligned_cols=73 Identities=19% Similarity=0.133 Sum_probs=47.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHHHcCCC---E--EeeCCChHHHHHhcC--CccEEEEc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERLGAD---S--FLVSRDQDEMQAAMG--TMDGIIDT 113 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~--~~d~vid~ 113 (173)
++|||.|+ |-+|..++..+...|++|+++++... ....+.. ++.. . -.|-.+...+.+... ..++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE-LGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH-TTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHH-hcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence 58999998 99999999999889999999997543 3344444 4421 1 223334444433322 56777777
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
....
T Consensus 80 a~~~ 83 (321)
T d1rpna_ 80 AAQS 83 (321)
T ss_dssp CSCC
T ss_pred cccc
Confidence 6543
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=96.03 E-value=0.01 Score=36.93 Aligned_cols=86 Identities=17% Similarity=0.237 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCh--HH---------HHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe-eCCChHHHHHhcC--C
Q 030694 41 KPGMHVGVVGLGG--LG---------HVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMG--T 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~--~G---------~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~--~ 106 (173)
..-++|||+|+|+ +| .-++..++..|++++.+..+++-...-.+ . +++++ .+-..+.+.++.. +
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~-aD~lYfePlt~e~v~~Ii~~E~ 82 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-M-ADATYIEPIHWEVVRKIIEKER 82 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-G-SSEEECSCCCHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-h-cceeeeecCCHHHHHHHHHHhC
Confidence 3458999999864 23 44666777789999999998875422111 1 34443 3444555655543 8
Q ss_pred ccEEEEcCCCccchHHHHHhhh
Q 030694 107 MDGIIDTVSAVHPLMPLIGLLK 128 (173)
Q Consensus 107 ~d~vid~~g~~~~~~~~~~~l~ 128 (173)
+|.++-..|+...++-..++.+
T Consensus 83 pd~il~~~GGQtalnla~~L~~ 104 (127)
T d1a9xa3 83 PDAVLPTMGGQTALNCALELER 104 (127)
T ss_dssp CSEEECSSSHHHHHHHHHHHHH
T ss_pred cCCeEEEeeeehHhHHHHHHHH
Confidence 9999999999866666665543
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=95.99 E-value=0.0048 Score=44.24 Aligned_cols=35 Identities=34% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.-.|+|+|||..|++++..++..|.+|+++++.++
T Consensus 7 ~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 34589999999999999999999999999998754
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.98 E-value=0.01 Score=38.23 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH-------cCCCEEeeCCChHHHHHhcCCccEEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER-------LGADSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~-------~g~~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
++..+|.|+|+|.+|..++.++...+. +++..+.++++.+-.... ++....+... ....+...+.|+++-
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~~~~~adiVvi 82 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEAALTGADCVIV 82 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHHHHTTCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--CchhhhhcCCCeEEE
Confidence 567899999999999888887777775 899999888754333221 1211111111 111223458999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 83 tag~ 86 (154)
T d1pzga1 83 TAGL 86 (154)
T ss_dssp CCSC
T ss_pred eccc
Confidence 8875
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=95.97 E-value=0.0081 Score=43.32 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=48.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEEeeC--CC-hHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVS--RD-QDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~--~~-~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|||+|+ |-+|..+++.+...| .+|+++++...+...+.+ ...-..+.. .+ .+..+....++|+||.+.+..
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-CCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence 6999998 999999999888888 489999887665554443 221122222 22 233333445899999988864
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.97 E-value=0.0061 Score=41.03 Aligned_cols=67 Identities=12% Similarity=0.016 Sum_probs=43.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCEEeeCCC-hHHHHHhcCCccEEEEcCCCc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~vid~~g~~ 117 (173)
++|||+|+ |-+|..+++.+...|. +|++..+++... . ...-.+..+ .+....+...+|.++.|+|..
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------~-~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~ 73 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------H-PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT 73 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------C-TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------c-ccccccccchhhhhhccccchheeeeeeeee
Confidence 78999999 9999999999888886 566666543210 1 111111122 222333345799999999875
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.96 E-value=0.01 Score=42.60 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=47.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-----hHHHHHH---HcC-C-CEE--eeCCChHHHHHhc--CCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEAVE---RLG-A-DSF--LVSRDQDEMQAAM--GTMD 108 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-----~~~~~~~---~~g-~-~~v--~~~~~~~~~~~~~--~~~d 108 (173)
+++||+|+ |-+|..++..+...|++|+++++... +.+.+.. ... . ... .|-.+.+.+.... .++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 57999999 99999999999999999999997432 2221111 011 1 111 2223334343332 2899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
+|+.+.+..
T Consensus 82 ~Vih~Aa~~ 90 (339)
T d1n7ha_ 82 EVYNLAAQS 90 (339)
T ss_dssp EEEECCSCC
T ss_pred hhhhccccc
Confidence 999999864
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.96 E-value=0.013 Score=42.36 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=47.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc----hHHHHHHHc--CCCE-EeeCCChHHHHHhcC--CccEEEEc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAVERL--GADS-FLVSRDQDEMQAAMG--TMDGIIDT 113 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~----~~~~~~~~~--g~~~-v~~~~~~~~~~~~~~--~~d~vid~ 113 (173)
+.|||+|+ |-+|..++..+...|.+|+++++... ......... +... ..|-.+.+.++.... ++|+||.+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 57899998 99999999999999999999874221 111122211 2222 223344454544432 89999999
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
.+..
T Consensus 82 Aa~~ 85 (347)
T d1z45a2 82 AGLK 85 (347)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=95.95 E-value=0.015 Score=40.43 Aligned_cols=34 Identities=29% Similarity=0.538 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
-.|.+|+|.|.|.+|..+++++...|++|+.++.
T Consensus 29 l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 29 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeec
Confidence 5799999999999999999999999999988764
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=95.93 E-value=0.01 Score=40.50 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=58.1
Q ss_pred CEEEEEcCChHHH-HHHHHHHHC-CCeEEE-EeCCcchHHHHHHHcCCC--EEeeCCChHHHHHh-cCCccEEEEcCCCc
Q 030694 44 MHVGVVGLGGLGH-VAVKFAKAM-GVKVTV-ISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAA-MGTMDGIIDTVSAV 117 (173)
Q Consensus 44 ~~vlI~G~g~~G~-~a~~~~~~~-g~~v~~-~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~-~~~~d~vid~~g~~ 117 (173)
-+|.|+|+|.+|. ......+.. +++++. +++++++.+.+.+.+|.. .+..+++.+.+ + ...+|+|+-+++..
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~el--l~~~~iD~V~I~tp~~ 111 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKI--AKDPKIDAVYIILPNS 111 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGG--GGCTTCCEEEECSCGG
T ss_pred EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhh--cccccceeeeeccchh
Confidence 4789999999986 344444443 667774 467788877777767742 23333332221 1 23799999999988
Q ss_pred cchHHHHHhhhcCCEEEEeC
Q 030694 118 HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g 137 (173)
.+.+.+..++..| +-+++.
T Consensus 112 ~H~~~~~~al~~g-k~v~~E 130 (221)
T d1h6da1 112 LHAEFAIRAFKAG-KHVMCE 130 (221)
T ss_dssp GHHHHHHHHHHTT-CEEEEC
T ss_pred hhhhHHHHhhhcc-hhhhcC
Confidence 6666777777654 445554
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.90 E-value=0.005 Score=41.54 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=28.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
|+|+|+|+.|+.++..++.+|.+|.++++.
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 789999999999999999999999999875
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=95.90 E-value=0.018 Score=41.62 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcC--ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CC----CEEeeCCChHHHHHh---cCC
Q 030694 40 DKPGMHVGVVGL--GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GA----DSFLVSRDQDEMQAA---MGT 106 (173)
Q Consensus 40 ~~~g~~vlI~G~--g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~----~~v~~~~~~~~~~~~---~~~ 106 (173)
+.+|++||=..+ |+.++ .+ ...|+ +|+.++.++...+.+++++ |. ..++..+..++++.. ...
T Consensus 142 ~~~g~~VLdlf~~~G~~sl---~a-a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~ 217 (317)
T d2b78a2 142 SAAGKTVLNLFSYTAAFSV---AA-AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT 217 (317)
T ss_dssp TTBTCEEEEETCTTTHHHH---HH-HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred hhCCCceeecCCCCcHHHH---HH-HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCC
Confidence 467999998866 44442 23 34677 7999999999888888753 21 124444445555543 237
Q ss_pred ccEEEEcCCC----c-----------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSA----V-----------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~----~-----------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+||---+. + ..+..++++|+|||.++.+....
T Consensus 218 fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs~ 266 (317)
T d2b78a2 218 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 266 (317)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9999853331 0 13556788999999999876543
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.89 E-value=0.0042 Score=44.42 Aligned_cols=33 Identities=30% Similarity=0.320 Sum_probs=29.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.++|+|||..|+.++..++..|.+|.+++.++.
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 489999999999999999989999999998754
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.1 Score=33.30 Aligned_cols=93 Identities=10% Similarity=0.254 Sum_probs=64.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCC--cchHHHHHHHcCCCEEeeCCChH--H-----------------
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTS--PSKKSEAVERLGADSFLVSRDQD--E----------------- 99 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g--~~v~~~~~~--~~~~~~~~~~~g~~~v~~~~~~~--~----------------- 99 (173)
+++.|+|+ |.+|..+..+.+... ++|+...-+ -+++...-.+|.+.+++-.++.. .
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g 81 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG 81 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence 47899999 999999999999873 577776543 33444433347877766554321 1
Q ss_pred ---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 100 ---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 100 ---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.++. .++|+++.+..+-..+...+..++.|-++...
T Consensus 82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA 123 (151)
T d1q0qa2 82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA 123 (151)
T ss_dssp HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence 11111 27999999999988888999888888765443
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.87 E-value=0.0061 Score=41.36 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=28.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
|+|+|+|+.|+.++..+...|.+|.++++.+.
T Consensus 8 viVIG~GpAGl~aA~~aa~~G~kV~lie~~~~ 39 (233)
T d1v59a1 8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (233)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 78999999999999999999999999997643
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.87 E-value=0.0054 Score=44.36 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=28.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~ 77 (173)
=++|+|+|+|..|++++..++..| .+|++.+++++
T Consensus 4 ~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 368999999999999987776655 48999998864
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=95.85 E-value=0.098 Score=35.02 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=66.2
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhc
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAM 104 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~ 104 (173)
|..++. .++..||-+|+| .|..++.+|+.. ..++++++.+......+.+. .|.+ .++..+.....+...
T Consensus 22 w~~~F~----~~~PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~ 96 (204)
T d2fcaa1 22 WNTVFG----NDNPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE 96 (204)
T ss_dssp HHHHHT----SCCCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC
T ss_pred HHHHcC----CCCceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccC
Confidence 555544 234567888987 477778888875 46999999998877766442 4533 233333233333232
Q ss_pred -CCccEEEEcCCCc--------------cchHHHHHhhhcCCEEEEeC
Q 030694 105 -GTMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 105 -~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g 137 (173)
+.+|.++-....+ ..+..+.+.|+|||.+.+..
T Consensus 97 ~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T 144 (204)
T d2fcaa1 97 PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 144 (204)
T ss_dssp TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred chhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence 3688887666664 24567789999999987763
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.84 E-value=0.0056 Score=43.80 Aligned_cols=31 Identities=35% Similarity=0.416 Sum_probs=28.7
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++..++..|.+|+++++++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7899999999999999999999999999765
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.81 E-value=0.024 Score=36.71 Aligned_cols=93 Identities=15% Similarity=0.216 Sum_probs=59.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHH----HHHH---HcCCCEEeeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKS----EAVE---RLGADSFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~----~~~~---~~g~~~v~~~~~~~~~~~~~~~~d~vid 112 (173)
+..+|.|+|+|.+|..++..+...|. ++..++.++++.+ .+.+ .++...++...+.+ ...+.|+++-
T Consensus 18 ~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~----~~~~adivvi 93 (159)
T d2ldxa1 18 SRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN----VSANSKLVII 93 (159)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG----GGTTEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh----hhccccEEEE
Confidence 34679999999999999988888876 7999998876543 1221 01222222222222 2358999999
Q ss_pred cCCCcc---------------chH---HHHHhhhcCCEEEEeCC
Q 030694 113 TVSAVH---------------PLM---PLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 113 ~~g~~~---------------~~~---~~~~~l~~~G~~v~~g~ 138 (173)
+.|.+. .+. ..+....|+|.++.+.+
T Consensus 94 tag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 94 TAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp CCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred ecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence 998751 111 22233467889888874
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.81 E-value=0.088 Score=33.16 Aligned_cols=90 Identities=10% Similarity=0.128 Sum_probs=56.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHH----HHHH---cCC-CEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSE----AVER---LGA-DSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~----~~~~---~g~-~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+|.|+|+|.+|..++..+...+. ++..++.++++.+- +++. ++. ..+....+.+ ...+.|+++-+.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~----~~~~adiVvita 77 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS----LLKGSEIIVVTA 77 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG----GGTTCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH----HhccccEEEEec
Confidence 68899999999888887776665 79999998876322 1111 222 2333322222 345899999998
Q ss_pred CCcc---------------chHHHHHh---hhcCCEEEEeCC
Q 030694 115 SAVH---------------PLMPLIGL---LKSQGKLVLLGA 138 (173)
Q Consensus 115 g~~~---------------~~~~~~~~---l~~~G~~v~~g~ 138 (173)
|.+. .+....+. ..|.+.++.+.+
T Consensus 78 g~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1ojua1 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (142)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred cccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecC
Confidence 8641 12233333 356688888765
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.77 E-value=0.0059 Score=39.89 Aligned_cols=34 Identities=21% Similarity=0.101 Sum_probs=28.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.+++|+|+|+|.+|+-++..++.+|.++.++...
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEec
Confidence 4789999999999999999999999876555433
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.75 E-value=0.0073 Score=41.16 Aligned_cols=31 Identities=32% Similarity=0.296 Sum_probs=28.7
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|+.|+.++..+...|.+|.++++.+
T Consensus 9 viIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 7889999999999999999999999998764
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.73 E-value=0.0075 Score=40.58 Aligned_cols=31 Identities=39% Similarity=0.412 Sum_probs=28.3
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++|+|+|+.|+.++..+++.|.+|.++++..
T Consensus 6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 7888999999999999999999999998753
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.037 Score=35.97 Aligned_cols=95 Identities=13% Similarity=0.240 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCC--cchHHHHHHHc----C---CCE-------EeeCCC-----hHHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTS--PSKKSEAVERL----G---ADS-------FLVSRD-----QDEMQA 102 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~--~~~~~~~~~~~----g---~~~-------v~~~~~-----~~~~~~ 102 (173)
+|.|.|-|.+|+++.+++.... .+++.+... .+.+..+.+ + | .+- +++... .....+
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~-yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~ 81 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLK-YDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhhe-ecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence 5789999999999999888764 466666532 223334433 2 1 110 111100 001111
Q ss_pred hc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 103 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 103 ~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+. .++|+|+||+|.-...+.+..++..|.+-|.++.+.
T Consensus 82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~ 122 (166)
T d1gado1 82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (166)
T ss_dssp GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence 21 189999999998767778888998887655565444
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=95.72 E-value=0.031 Score=36.31 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=53.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHC-CCeEEEEe-CCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (173)
-+|.|+|+|.+|...+...+.. +++++.+. +++++. .........+ .......+|+++.|++.....+
T Consensus 4 irvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~-------~~~~~~~~~~---~~~~~~~~D~Vvi~tp~~~h~~ 73 (170)
T d1f06a1 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-------TKTPVFDVAD---VDKHADDVDVLFLCMGSATDIP 73 (170)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-------SSSCEEEGGG---GGGTTTTCSEEEECSCTTTHHH
T ss_pred ceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc-------cccccccchh---hhhhccccceEEEeCCCcccHH
Confidence 3689999999999888887765 45666554 443321 1111222221 1223457999999999887777
Q ss_pred HHHHhhhcCCEEEEe
Q 030694 122 PLIGLLKSQGKLVLL 136 (173)
Q Consensus 122 ~~~~~l~~~G~~v~~ 136 (173)
.+.++|+.|-.++.+
T Consensus 74 ~a~~aL~aG~~vv~~ 88 (170)
T d1f06a1 74 EQAPKFAQFACTVDT 88 (170)
T ss_dssp HHHHHHTTTSEEECC
T ss_pred HHHHHHHCCCcEEEe
Confidence 888888888776643
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.71 E-value=0.0067 Score=42.27 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
-|+|+|+|.+|+.++..+...|.+|+++++.+
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999999999999999754
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=95.70 E-value=0.0054 Score=44.18 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=27.4
Q ss_pred EEEEcCChHHHHHHHHHH-----HCCCeEEEEeCCcc
Q 030694 46 VGVVGLGGLGHVAVKFAK-----AMGVKVTVISTSPS 77 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~-----~~g~~v~~~~~~~~ 77 (173)
|+|+|+|+.|++++..+. ..|.+|+++++.+.
T Consensus 10 V~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 10 VLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 899999999999888774 57999999998654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.70 E-value=0.0072 Score=42.85 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=33.0
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 41 ~~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
-+|+++||.|+ | ++|++.++.+...|++|++..+++..
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 36899999997 5 89999999999999999999886543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.70 E-value=0.024 Score=35.89 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=53.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchH-HHHHHHcC-C----CEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKK-SEAVERLG-A----DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~-~~~~~~~g-~----~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
.+|.|+|+|.+|..++..+...+. ++..++.++++. ..+.+ +. . ........ + . +...+.|+++-+.|
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~D-l~~~~~~~~~~~~~~~-~-~-~~~~~adivvitag 77 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGLPFMGQMSLYAG-D-Y-SDVKDCDVIVVTAG 77 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSCCCTTCEEEC---C-G-GGGTTCSEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeee-eccCcccCCCeeEeeC-c-H-HHhCCCceEEEecc
Confidence 368899999999998888887775 799999888753 22222 22 1 11111111 1 1 12348999999988
Q ss_pred Ccc---------------chH---HHHHhhhcCCEEEEeCC
Q 030694 116 AVH---------------PLM---PLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 116 ~~~---------------~~~---~~~~~l~~~G~~v~~g~ 138 (173)
.+. .+. ..+...+|.+.++.+.+
T Consensus 78 ~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtN 118 (142)
T d1y6ja1 78 ANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSN 118 (142)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSS
T ss_pred cccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecC
Confidence 651 122 22333457788888764
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.68 E-value=0.093 Score=32.99 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=45.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC-------C-CEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG-------A-DSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g-------~-~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.+|.|+|+|.+|..++-++...+. ++..++.++++.+.....+. . ..+....+.+ ...+.|+++-+.
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~----~~~~advvvita 77 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA----DTANSDVIVVTS 77 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG----GGTTCSEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH----HhcCCCEEEEee
Confidence 578999999999888777666665 99999988776433222121 1 1122112222 134799999999
Q ss_pred CCc
Q 030694 115 SAV 117 (173)
Q Consensus 115 g~~ 117 (173)
|.+
T Consensus 78 g~~ 80 (142)
T d1uxja1 78 GAP 80 (142)
T ss_dssp SCC
T ss_pred ecc
Confidence 975
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.68 E-value=0.0061 Score=41.25 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=28.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.++|+|+|+.|+.++..++.+|.+|.++++.
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence 3789999999999999999999999999875
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.58 E-value=0.008 Score=40.90 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=28.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPS 77 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~ 77 (173)
.+|+|+|+|+.|+.+++.++.. |++|+++++.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3799999999999999866544 779999988764
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.58 E-value=1.5e-06 Score=59.89 Aligned_cols=56 Identities=9% Similarity=-0.034 Sum_probs=43.6
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 67 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~ 67 (173)
+++++|++.+..+++++.....++++++.+... +.+ ++|+|++|+.++|.+|.+|+
T Consensus 146 ~l~~iPd~~~~~~~~~~~~~~~~~~~a~~~~~~-~~g----~~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 146 NLLKLPDRDKAMEKINIAEVVGVQVISLDDAPR-GYG----EFDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp HCEECSCHHHHHHTCCHHHHHTEEEECGGGHHH-HHH----HHHHTCSCEEEECTTCSSCC
T ss_pred eEEECCCCCChHHHHHHHHHHHHHHHHHHhCCC-CCe----EEeeCHHHHHHHHHHHHcCC
Confidence 689999987777777788888888888765443 333 35889999999999998885
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.099 Score=37.51 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=68.6
Q ss_pred HHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCChH--------
Q 030694 30 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRDQD-------- 98 (173)
Q Consensus 30 a~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~-------- 98 (173)
|++.+.....-.+..+|+...+|..|.+++..++..|.+++++.. +++|.+.++. +|++.+....+.+
T Consensus 62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~-~Ga~vi~~~~~~~~~~~~~~~ 140 (331)
T d1tdja1 62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRG-FGGEVLLHGANFDEAKAKAIE 140 (331)
T ss_dssp HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHH-HSCEEECCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHh-cCCEEEEcCcccccchhhhhh
Confidence 455555544324455566656699999999999999997777754 3446677777 8987554433211
Q ss_pred ---------------------------HHHHhcCCccEEEEcCCCccchH---HHHHhhhcCCEEEEeC
Q 030694 99 ---------------------------EMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 99 ---------------------------~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 137 (173)
.+.+..+.+|.+|-++|+..++. ..++.+.+..+++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve 209 (331)
T d1tdja1 141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE 209 (331)
T ss_dssp HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence 01111237999999999875443 4455556777877664
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.54 E-value=0.0055 Score=41.74 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=29.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-------CeEEEEeCCcc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPS 77 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g-------~~v~~~~~~~~ 77 (173)
.+|+|+|+|+.|++++..+...| ++|++.++.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 47999999999999998888777 47999998764
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.53 E-value=0.012 Score=39.02 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEee-CCChHHHHHhcCCccEEEEcCCCccc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLV-SRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.-+|.|+|+ |-+|.-.++++..+-. ++..+.++...-+.+.+........+ ............++|++|-|++...
T Consensus 5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~- 83 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGT- 83 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSH-
T ss_pred ccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccch-
Confidence 346899999 9999999999998754 66666544433222332111100000 0001111122347999999999884
Q ss_pred hHHHHHhhhcCCEEEEeCC
Q 030694 120 LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~ 138 (173)
.......+...+.++....
T Consensus 84 s~~~~~~l~~~~~~v~~~~ 102 (183)
T d2cvoa1 84 TQEIIKGLPQELKIVDLSA 102 (183)
T ss_dssp HHHHHHTSCSSCEEEECSS
T ss_pred HHHHHHHHHhcCcccccch
Confidence 5566677888888877653
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.49 E-value=0.03 Score=35.65 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=49.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC-C---CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAM-G---VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~-g---~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
++|.|+|+ |-+|.-.++++... . .+++...++...............+.+..+... ..++|++|-|++...
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~----~~~~DivF~a~~~~~ 77 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGGDY 77 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCHHH
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhh----hhcCcEEEEecCchH
Confidence 47999999 99999999754433 2 256666655432211111011112222222221 237999999999884
Q ss_pred chHHHHHhhhcCC---EEEEeCC
Q 030694 119 PLMPLIGLLKSQG---KLVLLGA 138 (173)
Q Consensus 119 ~~~~~~~~l~~~G---~~v~~g~ 138 (173)
-......+...| .++..+.
T Consensus 78 -s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 78 -TNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp -HHHHHHHHHHTTCCCEEEECSS
T ss_pred -HHHhhHHHHhcCCCeecccCCc
Confidence 334444444444 4666653
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=95.48 E-value=0.042 Score=35.85 Aligned_cols=95 Identities=15% Similarity=0.240 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHHC---CCeEEEEeC--CcchHHHHHHHc----C---CC------EE-eeCCC-----hHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAM---GVKVTVIST--SPSKKSEAVERL----G---AD------SF-LVSRD-----QDEM 100 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~---g~~v~~~~~--~~~~~~~~~~~~----g---~~------~v-~~~~~-----~~~~ 100 (173)
+|.|.|-|-+|+.+.+.+... ..+|+.+.- +.+.+..+.+ + | .+ .+ ++... ....
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlk-yDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLK-YDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHH-CCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHh-ccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 688999999999999987653 356666643 2334444444 2 1 11 00 11000 0011
Q ss_pred HHhc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.++. -++|+|+||+|.-...+.+..++..|-+-+.++.+.
T Consensus 81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~ 123 (169)
T d1hdgo1 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA 123 (169)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence 1111 189999999998766778888998876555555443
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.44 E-value=0.0091 Score=39.62 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=29.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
...|+|+|+|+.|+.++..+.+.|.+++++++.
T Consensus 5 ~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~ 37 (192)
T d1vdca1 5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGW 37 (192)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred cceEEEECCCHHHHHHHHHHHHcCCcEEEEEee
Confidence 467999999999999999999999999999754
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.43 E-value=0.0095 Score=40.09 Aligned_cols=31 Identities=32% Similarity=0.382 Sum_probs=28.3
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|+.|+.++..+.+.|.+|.++++.+
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~~ 36 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 7889999999999999999999999998643
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=95.33 E-value=0.011 Score=42.05 Aligned_cols=31 Identities=45% Similarity=0.580 Sum_probs=28.5
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++..+...|.+|+++++.+
T Consensus 19 VlVIG~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVGSGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 8999999999999999999999999998754
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.013 Score=39.42 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|+|+|+.|+.++..+.+.|.+|.+++..
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 788899999999999999999999999864
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.23 E-value=0.11 Score=35.57 Aligned_cols=40 Identities=30% Similarity=0.567 Sum_probs=31.6
Q ss_pred HHhhCCCCCCCEEEEEcCChHHHHHHHHH-HHCCCeEEEEe
Q 030694 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVIS 73 (173)
Q Consensus 34 l~~~~~~~~g~~vlI~G~g~~G~~a~~~~-~~~g~~v~~~~ 73 (173)
+.....-.++.+|+|.|.|.+|..+++.+ +..|++|+.++
T Consensus 22 ~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 22 MDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp HHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEee
Confidence 33333335799999999999999999987 56799988876
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=95.21 E-value=0.013 Score=40.99 Aligned_cols=30 Identities=33% Similarity=0.366 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
|+|+|+|.+|+.++..+...|.+|+++++.
T Consensus 6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 889999999999999999999999999875
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.20 E-value=0.01 Score=40.42 Aligned_cols=30 Identities=30% Similarity=0.290 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
|+|+|+|+.|+.++..+...|.+|.+++..
T Consensus 6 viVIG~GpaGl~aA~~aa~~G~kV~viE~~ 35 (235)
T d1h6va1 6 LIIIGGGSGGLAAAKEAAKFDKKVMVLDFV 35 (235)
T ss_dssp EEEECCSHHHHHHHHHHGGGCCCEEEECCC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 789999999999999999999999999854
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.20 E-value=0.033 Score=34.16 Aligned_cols=86 Identities=17% Similarity=0.255 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCh--HH---------HHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCEEe-eCCChHHHHHhc--CC
Q 030694 42 PGMHVGVVGLGG--LG---------HVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFL-VSRDQDEMQAAM--GT 106 (173)
Q Consensus 42 ~g~~vlI~G~g~--~G---------~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~-~~~~~~~~~~~~--~~ 106 (173)
..++|||+|+|+ +| ..+++.+|..|.+++++..+++-... . +. +++++ .+-..+.+.++. ++
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst--d-~d~aD~lYfeplt~e~v~~Ii~~E~ 79 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST--D-YDTSDRLYFEPVTLEDVLEIVRIEK 79 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT--S-TTSSSEEECCCCSHHHHHHHHHHHC
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc--C-hhhcCceEEccCCHHHHHHHHHHhC
Confidence 457899999864 23 34666777889999999998874431 1 22 44443 333445555543 38
Q ss_pred ccEEEEcCCCccchHHHHHhhhcCC
Q 030694 107 MDGIIDTVSAVHPLMPLIGLLKSQG 131 (173)
Q Consensus 107 ~d~vid~~g~~~~~~~~~~~l~~~G 131 (173)
+|.++-..|+...++.+.. |.+.|
T Consensus 80 p~~ii~~~GGQtalnla~~-L~~~g 103 (121)
T d1a9xa4 80 PKGVIVQYGGQTPLKLARA-LEAAG 103 (121)
T ss_dssp CSEEECSSSTHHHHTTHHH-HHHTT
T ss_pred CCEEEeehhhhhHHHHHHH-HHHcC
Confidence 8999999999865555444 33444
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.16 E-value=0.031 Score=41.29 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=60.7
Q ss_pred ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CCC----------------EEeeCCC-hHHHHHhcCCccEE
Q 030694 52 GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GAD----------------SFLVSRD-QDEMQAAMGTMDGI 110 (173)
Q Consensus 52 g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~----------------~v~~~~~-~~~~~~~~~~~d~v 110 (173)
+++|.-.+++++..|+ +|++.+.+++-.+.+++++ +.. ..++..+ ...+.+....+|+|
T Consensus 54 sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvI 133 (375)
T d2dula1 54 SATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFI 133 (375)
T ss_dssp CTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEE
T ss_pred CCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHhhcCcCCcc
Confidence 6678888899998888 8999999999988888753 211 1111122 22333334579977
Q ss_pred -EEcCCCc-cchHHHHHhhhcCCEEEEeC
Q 030694 111 -IDTVSAV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 -id~~g~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
+|..|.+ .-++.++++++.+|.+....
T Consensus 134 DiDPfGs~~pfldsAi~a~~~~Gll~vTa 162 (375)
T d2dula1 134 DLDPFGSPMEFLDTALRSAKRRGILGVTA 162 (375)
T ss_dssp EECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence 8999986 34778999999999877664
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.0022 Score=45.21 Aligned_cols=51 Identities=16% Similarity=-0.011 Sum_probs=35.7
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g 87 (173)
...+. ..|+++|-+|+|+ |......+...+.+|++++-++.-++.+++.+.
T Consensus 48 f~~g~-~~g~~vLDiGcG~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~ 98 (263)
T d2g72a1 48 FATGE-VSGRTLIDIGSGP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 98 (263)
T ss_dssp HHTSC-SCCSEEEEETCTT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred cCCCC-CCCcEEEEeccCC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence 33344 6789999999974 433333344445589999999998888887544
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.15 E-value=0.005 Score=39.35 Aligned_cols=90 Identities=12% Similarity=0.072 Sum_probs=52.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCC---CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g---~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-+|.|+|+ |-+|+-.++++..++ .++..+.++...-+.+.. .+.+..+. +...+...++|++|-|.+....
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~-~~~~~~~~----~~~~~~~~~~d~vf~a~p~~~s 77 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF-AESSLRVG----DVDSFDFSSVGLAFFAAAAEVS 77 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE-TTEEEECE----EGGGCCGGGCSEEEECSCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceee-ccccchhc----cchhhhhccceEEEecCCcchh
Confidence 46899999 999999999997543 377766655432111111 11111110 0111112379999999998754
Q ss_pred hHHHHHhhhcCCEEEEeCC
Q 030694 120 LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~ 138 (173)
....-.....+.+++..+.
T Consensus 78 ~~~~~~~~~~g~~VID~Ss 96 (144)
T d2hjsa1 78 RAHAERARAAGCSVIDLSG 96 (144)
T ss_dssp HHHHHHHHHTTCEEEETTC
T ss_pred hhhccccccCCceEEeech
Confidence 4444455567778777763
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=95.15 E-value=0.015 Score=40.60 Aligned_cols=95 Identities=22% Similarity=0.165 Sum_probs=58.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cC-CCE--EeeCCChHHHHHhcCCccEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LG-ADS--FLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g-~~~--v~~~~~~~~~~~~~~~~d~vi 111 (173)
.++...+||-+|+| .|..+..++++. +.++++++. ++-.+.+++. .| .+. +... +.......++|+++
T Consensus 78 d~~~~~~vlDvG~G-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~---d~~~~~p~~~D~v~ 152 (256)
T d1qzza2 78 DWSAVRHVLDVGGG-NGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG---DFFKPLPVTADVVL 152 (256)
T ss_dssp CCTTCCEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC---CTTSCCSCCEEEEE
T ss_pred CCccCCEEEEECCC-CCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee---eccccccccchhhh
Confidence 34677899999886 577888888887 559999986 3434444332 23 121 2221 11112234788887
Q ss_pred EcCCC-----c---cchHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSA-----V---HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~-----~---~~~~~~~~~l~~~G~~v~~g~ 138 (173)
-.--- + ..+..+.+.|+|||+++.+..
T Consensus 153 ~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 153 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 43221 1 235678899999999998764
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.07 E-value=0.027 Score=36.09 Aligned_cols=36 Identities=19% Similarity=0.116 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~ 76 (173)
.-+++|+|+|+|.+|.=++..+.+.|+ .|+++.+.+
T Consensus 43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 346789999999999999999999998 577777654
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=95.05 E-value=0.1 Score=34.03 Aligned_cols=95 Identities=15% Similarity=0.246 Sum_probs=56.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-CeEEEEeC--CcchHHHHHHHcC-------CCEEeeCC------------ChHHHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIST--SPSKKSEAVERLG-------ADSFLVSR------------DQDEMQA 102 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~--~~~~~~~~~~~~g-------~~~v~~~~------------~~~~~~~ 102 (173)
+|.|.|-|.+|+++.+.+.... .+++.+-. +.+.+..+.+ +. .+.-++.. ......+
T Consensus 3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~ 81 (171)
T d3cmco1 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLK-YDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN 81 (171)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhc-ccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence 5789999999999998887553 46666643 2233444443 21 11001100 0011111
Q ss_pred hc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 103 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 103 ~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+. .++|+|+||+|.-...+.+..++..|-+-|.++.+.
T Consensus 82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~ 122 (171)
T d3cmco1 82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA 122 (171)
T ss_dssp CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence 11 179999999998877778888898876555555443
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=95.03 E-value=0.014 Score=40.91 Aligned_cols=33 Identities=36% Similarity=0.353 Sum_probs=27.5
Q ss_pred CEEEEEcCChHHHHHHHHH-HHCCCeEEEEeCCc
Q 030694 44 MHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSP 76 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~-~~~g~~v~~~~~~~ 76 (173)
.-|+|+|+|+.|+.++..+ +..|.+|+++++.+
T Consensus 34 ~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence 3499999999999887654 55699999999875
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.00 E-value=0.032 Score=35.53 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=37.5
Q ss_pred HHHHHHHhhCCCCCCCEEEEE--cCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 29 TVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 29 ta~~~l~~~~~~~~g~~vlI~--G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
|....+. ....+++.++|+ |+|-+|+-+++.+..+|++|+++.+.+.
T Consensus 27 t~~d~l~--~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 27 TPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CHHHHHH--TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CHHHHhc--CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4455543 233778888888 6789999999999999999999998753
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.98 E-value=0.043 Score=38.35 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH----HC-C--CeEEEEeCCcchHHHHHHHcCCC-----EEeeCC--C-hHHHHHh--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK----AM-G--VKVTVISTSPSKKSEAVERLGAD-----SFLVSR--D-QDEMQAA-- 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~----~~-g--~~v~~~~~~~~~~~~~~~~~g~~-----~v~~~~--~-~~~~~~~-- 103 (173)
++.-+||-+|+|. |.....+++ .. + .++++++.++..++.+++.+... ..++.. . .+.....
T Consensus 39 ~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (280)
T d1jqea_ 39 KSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLE 117 (280)
T ss_dssp CSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTT
T ss_pred CCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcc
Confidence 4445799999852 333333322 22 2 36788899888888887754311 111111 1 1111111
Q ss_pred ---cCCccEEEEcCCCc------cchHHHHHhhhcCCEEEEeC
Q 030694 104 ---MGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 104 ---~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
...+|+|+..-.-. ..+..+.++|+|||.++...
T Consensus 118 ~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~ 160 (280)
T d1jqea_ 118 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 160 (280)
T ss_dssp SSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence 23799998644322 35778889999999887664
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.86 E-value=0.023 Score=40.44 Aligned_cols=34 Identities=18% Similarity=0.397 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
-.|.+|+|.|.|.+|..+++.+...|++|+.+.-
T Consensus 34 L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence 4689999999999999999999999999998863
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=94.82 E-value=0.095 Score=35.79 Aligned_cols=94 Identities=12% Similarity=0.183 Sum_probs=57.4
Q ss_pred CCEEEEEcCCh----HHHHHHHHHHHC--CCeEEEE-eCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 43 GMHVGVVGLGG----LGHVAVKFAKAM--GVKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 43 g~~vlI~G~g~----~G~~a~~~~~~~--g~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
.-+|.|+|+|. ++.......+.. +++++++ +++.++.+.+.+.++....-.+.+.+.+- ....+|+|+.|++
T Consensus 16 ~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~iD~V~i~tp 94 (237)
T d2nvwa1 16 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFA-QYKDIDMIVVSVK 94 (237)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHH-HCTTCSEEEECSC
T ss_pred CeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcc-cccccceeeccCC
Confidence 35789999865 333344444443 4677754 56677776666657744332233333221 1347999999998
Q ss_pred CccchHHHHHhhhcC-----CEEEEeC
Q 030694 116 AVHPLMPLIGLLKSQ-----GKLVLLG 137 (173)
Q Consensus 116 ~~~~~~~~~~~l~~~-----G~~v~~g 137 (173)
.....+.+..+|..| ++-+++.
T Consensus 95 ~~~h~~~~~~al~aG~~~~~~k~V~~E 121 (237)
T d2nvwa1 95 VPEHYEVVKNILEHSSQNLNLRYLYVE 121 (237)
T ss_dssp HHHHHHHHHHHHHHSSSCSSCCEEEEE
T ss_pred CcchhhHHHHHHHhcccccCCceEEEe
Confidence 876677777777655 3556665
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=94.82 E-value=0.015 Score=41.63 Aligned_cols=32 Identities=38% Similarity=0.506 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
-|+|+|+|..|+.++..+...|++|+++++.+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGANVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999998753
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=94.79 E-value=0.0082 Score=40.23 Aligned_cols=88 Identities=18% Similarity=0.137 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
.++.+||-+|+| .|..+..+ .++++++.+++..+.+++ -+... +..+..+ +....+.+|+|+....-.
T Consensus 35 ~~~~~vLDiGcG-~G~~~~~~-----~~~~giD~s~~~~~~a~~-~~~~~-~~~d~~~-l~~~~~~fD~I~~~~~l~h~~ 105 (208)
T d1vlma_ 35 LPEGRGVEIGVG-TGRFAVPL-----KIKIGVEPSERMAEIARK-RGVFV-LKGTAEN-LPLKDESFDFALMVTTICFVD 105 (208)
T ss_dssp CCSSCEEEETCT-TSTTHHHH-----TCCEEEESCHHHHHHHHH-TTCEE-EECBTTB-CCSCTTCEEEEEEESCGGGSS
T ss_pred CCCCeEEEECCC-Cccccccc-----ceEEEEeCChhhcccccc-ccccc-ccccccc-ccccccccccccccccccccc
Confidence 456789999986 35444433 357899999998888887 45432 2222111 111124799998654432
Q ss_pred ---cchHHHHHhhhcCCEEEEeC
Q 030694 118 ---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ---~~~~~~~~~l~~~G~~v~~g 137 (173)
..+..+.+.|+|||+++...
T Consensus 106 d~~~~l~~~~~~L~pgG~l~i~~ 128 (208)
T d1vlma_ 106 DPERALKEAYRILKKGGYLIVGI 128 (208)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhhhcCCCCceEEEEe
Confidence 24668889999999988764
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=94.75 E-value=0.017 Score=41.32 Aligned_cols=31 Identities=35% Similarity=0.593 Sum_probs=28.5
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++..+...|++|+++++.+
T Consensus 26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 8999999999999999999999999998754
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=94.73 E-value=0.037 Score=33.51 Aligned_cols=36 Identities=17% Similarity=0.046 Sum_probs=28.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHC---CCeEEEEeCCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSPS 77 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~---g~~v~~~~~~~~ 77 (173)
..++++|+|+|.+|.-++.....+ |.+|+++.+.+.
T Consensus 17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 17 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred cCCeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 358999999999999888765544 779999988653
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=94.68 E-value=0.17 Score=34.35 Aligned_cols=109 Identities=18% Similarity=0.181 Sum_probs=63.1
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC--------cchHHHHHHHcCCCEEeeC-CChHHH
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS--------PSKKSEAVERLGADSFLVS-RDQDEM 100 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~--------~~~~~~~~~~~g~~~v~~~-~~~~~~ 100 (173)
+.+++....--...+++++|+|..|...+++....+. +++.+++. ...+...+..+... .+. .....+
T Consensus 14 l~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l 91 (222)
T d1vl6a1 14 LNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARI--TNPERLSGDL 91 (222)
T ss_dssp HHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHT--SCTTCCCSCH
T ss_pred HHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhh--hcchhhhcch
Confidence 4445555554578899999999999998998888888 89998876 11111121111100 000 001122
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+...+.++.+............+..+.+.-.+.-++++..
T Consensus 92 ~~~l~g~~~~~g~~~~~~~~~e~m~~~~~rPIIFpLSNPt~ 132 (222)
T d1vl6a1 92 ETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVP 132 (222)
T ss_dssp HHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred HhhccCcceeccccccccccHHHHhhcCCCCEEEecCCCcc
Confidence 23445788877776655333355666666656655665544
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=94.66 E-value=0.018 Score=41.23 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=28.3
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++-.++..|++|+++++..
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 8999999999999999999999999998754
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.65 E-value=0.037 Score=41.53 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=29.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~ 75 (173)
+.+|||+|+|++|..++..+...|. ++++++.+
T Consensus 37 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4679999999999999999999998 89998765
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.64 E-value=0.21 Score=33.26 Aligned_cols=101 Identities=20% Similarity=0.149 Sum_probs=66.2
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCC--CEEeeCCChHHHHHhc
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGA--DSFLVSRDQDEMQAAM 104 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~--~~v~~~~~~~~~~~~~ 104 (173)
|+.++. ..+..+|-+|+| .|..+..+|+.. ...+++++.++.....+.+. .+. -.++..+..+..+...
T Consensus 24 w~~~f~----~~~plvLdIGcG-~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~~ 98 (204)
T d1yzha1 24 WRDLFG----NDNPIHVEVGSG-KGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE 98 (204)
T ss_dssp HHHHHT----SCCCEEEEESCT-TSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC
T ss_pred HHHHcC----CCCCeEEEEecc-CCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhcc
Confidence 555553 234567888887 577888888887 56999999998876665442 343 2344433333322222
Q ss_pred -CCccEEEEcCCCc--------------cchHHHHHhhhcCCEEEEe
Q 030694 105 -GTMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 105 -~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~ 136 (173)
..+|.++-..+.+ ..++.+.+.|+|||.+.+.
T Consensus 99 ~~~~~~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~ 145 (204)
T d1yzha1 99 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 145 (204)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCceehhcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence 3788888777764 2356778999999998765
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=94.61 E-value=0.09 Score=34.29 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCC--cchHHHHHHHc----C-C-CEEeeCCCh--------------HH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTS--PSKKSEAVERL----G-A-DSFLVSRDQ--------------DE 99 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g---~~v~~~~~~--~~~~~~~~~~~----g-~-~~v~~~~~~--------------~~ 99 (173)
+|.|.|-|-+|+++.+.+.... .+|+.+... .+.+..+.+ + | . ..+....+. ..
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlk-yDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~ 80 (172)
T d1rm4a1 2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLK-YDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN 80 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHH-CCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHh-cCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence 5789999999999999776543 355555432 223333333 2 1 0 111111100 01
Q ss_pred HHHhc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 100 MQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 100 ~~~~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..++. .++|+|+||+|.-...+.+..++..|-+-|.++.+.
T Consensus 81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~ 124 (172)
T d1rm4a1 81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 124 (172)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence 11111 189999999998656778888898887544554333
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.60 E-value=0.025 Score=39.18 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|+|+|+.|+.++..+...|.+|.++++.
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~ 33 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKS 33 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 689999999999999999999999999975
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=94.49 E-value=0.025 Score=39.91 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=27.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~ 76 (173)
.|+|+|+|.+|++++..+...|. +|+++++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 59999999999998888878897 699998763
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=94.37 E-value=0.034 Score=36.47 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=51.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeC-Cc-----chHHHHHHHc-C--CCEEeeCCChHHHHHhcCCccEEEEc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST-SP-----SKKSEAVERL-G--ADSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~-~~-----~~~~~~~~~~-g--~~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
+|.|+|+ |-+|.-+++++..+ .+++..+.. +. ++.......+ + ........+. .....++|++|-|
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dvvf~a 79 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV---RDFSADVDVVFLA 79 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG---GGTCTTCCEEEEC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh---hhhhcccceeecc
Confidence 7899999 99999999999988 446654432 11 1122211111 1 1111111111 1123479999999
Q ss_pred CCCccchHHHHHhhhcCCEEEEeC
Q 030694 114 VSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.+........-..+..+-+++..+
T Consensus 80 lp~~~s~~~~~~~~~~~~~vIDlS 103 (179)
T d2g17a1 80 TAHEVSHDLAPQFLQAGCVVFDLS 103 (179)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECS
T ss_pred ccchhHHHHhhhhhhcCceeeccc
Confidence 998744444445556666777776
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.33 E-value=0.17 Score=33.50 Aligned_cols=91 Identities=15% Similarity=0.267 Sum_probs=55.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC-----CeEEEE-eC--CcchHHHHHHHcC-------CC---------------EEee-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG-----VKVTVI-ST--SPSKKSEAVERLG-------AD---------------SFLV- 93 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g-----~~v~~~-~~--~~~~~~~~~~~~g-------~~---------------~v~~- 93 (173)
+|.|.|-|-+|+.+.+.+...+ .+++.+ +. +.+.+..+.+ +. .+ .+++
T Consensus 4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlk-yDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g 82 (190)
T d1k3ta1 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMR-YDTVHGKFKYEVTTTKSSPSVAKDDTLVVNG 82 (190)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHH-EETTTEECSSCEEEECSSTTCSSCCEEEETT
T ss_pred EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhh-ccccccCCCceEEEccCccccccccceEEcC
Confidence 6889999999999998776543 244443 33 3445555555 32 00 0111
Q ss_pred --------CCChHHHHHhc---CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 94 --------SRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 94 --------~~~~~~~~~~~---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+++. ++. -++|+|+||+|.-...+.+..++..|-+-|.+..+
T Consensus 83 ~~i~~~~~~~~p~---~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP 136 (190)
T d1k3ta1 83 HRILCVKAQRNPA---DLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAP 136 (190)
T ss_dssp EEEEEEECCSCGG---GSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred ceEEecccCCChh---HCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccC
Confidence 11111 111 18999999999776677888899888665555543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.30 E-value=0.061 Score=34.28 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=47.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH-------cCCC-EEeeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER-------LGAD-SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~-------~g~~-~v~~~~~~~~~~~~~~~~d~vid 112 (173)
|..+|.|+|+|.+|..++.++...+. ++..++.++++.+-.... .+.. .+.-..+.+ ...+.|+++-
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~----~~~~advvvi 77 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYD----DLAGADVVIV 77 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGG----GGTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccccc----ccCCCcEEEE
Confidence 45689999999999988888887776 899999888763322111 1222 222111121 2348999999
Q ss_pred cCCCc
Q 030694 113 TVSAV 117 (173)
Q Consensus 113 ~~g~~ 117 (173)
+.|.+
T Consensus 78 tag~~ 82 (150)
T d1t2da1 78 TAGFT 82 (150)
T ss_dssp CCSCS
T ss_pred ecccc
Confidence 99954
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.24 E-value=0.029 Score=41.35 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=27.0
Q ss_pred EEEEEcCChHHHHHHHHHHH------CCCeEEEEeCCcc
Q 030694 45 HVGVVGLGGLGHVAVKFAKA------MGVKVTVISTSPS 77 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~------~g~~v~~~~~~~~ 77 (173)
-|+|+|+|+.|++++..++. .|.+|.++++...
T Consensus 34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~ 72 (380)
T d2gmha1 34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72 (380)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence 38999999999988766554 7899999998754
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.19 E-value=0.028 Score=38.14 Aligned_cols=93 Identities=22% Similarity=0.238 Sum_probs=55.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHH---cCC-C--EEeeCCChHHHHHhc-----CCcc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVER---LGA-D--SFLVSRDQDEMQAAM-----GTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~---~g~-~--~v~~~~~~~~~~~~~-----~~~d 108 (173)
+.++||-+|.+ .|..++.++++. +.+|+.++.+++..+.+++. .|. + .++.....+.+.++. +.+|
T Consensus 56 kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~~D 134 (214)
T d2cl5a1 56 SPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 134 (214)
T ss_dssp CCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCCEE
T ss_pred CCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccccc
Confidence 45799999975 355666677664 56999999999877777653 342 1 233333233322221 3689
Q ss_pred EEEEcCCCcc-----chHHHHHhhhcCCEEEE
Q 030694 109 GIIDTVSAVH-----PLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 109 ~vid~~g~~~-----~~~~~~~~l~~~G~~v~ 135 (173)
.+|--..... .+...++.|+|||.++.
T Consensus 135 ~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~ 166 (214)
T d2cl5a1 135 MVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA 166 (214)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred eeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence 8874432221 12344567899997664
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=94.18 E-value=0.39 Score=33.91 Aligned_cols=54 Identities=26% Similarity=0.249 Sum_probs=38.5
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEe
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFL 92 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~ 92 (173)
..+.++++|+...+|+-|.+++..++..|.+++++.. ++.|.+.++. +|++.+.
T Consensus 56 g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~GA~vv~ 112 (310)
T d1y7la1 56 GTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCG-LGVNLVL 112 (310)
T ss_dssp TSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHH-TTCEEEE
T ss_pred CCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHH-hCCceEe
Confidence 3446677666666699999999999999996555543 3446666666 8877654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.18 E-value=0.032 Score=40.04 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=29.3
Q ss_pred CEE-EEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 44 MHV-GVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 44 ~~v-lI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++| ||.|+ |-+|..++..+...|++|+++++..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 357 99998 9999999999999999999999854
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=94.17 E-value=0.047 Score=38.57 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=40.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~ 116 (173)
++|||+|+ |-+|..+++.+...|..+++++...+ +|..+.+...++. .++|.++.+.+.
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~ 64 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAK 64 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchh
Confidence 58999998 99999999999999998777654322 1223333333332 267888877644
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.14 E-value=0.031 Score=37.45 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
.+|++||=+|+| +|..+..++ ..|+ +|++++.+++..+.+++++ +.. .++..+. .+..+++|+||-.-+
T Consensus 45 l~g~~vLDlg~G-tG~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~----~~~~~~fD~Vi~nPP 118 (201)
T d1wy7a1 45 IEGKVVADLGAG-TGVLSYGAL-LLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDV----SEFNSRVDIVIMNPP 118 (201)
T ss_dssp STTCEEEEETCT-TCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCG----GGCCCCCSEEEECCC
T ss_pred CCCCEEEECcCc-chHHHHHHH-HcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECch----hhhCCcCcEEEEcCc
Confidence 578999999885 333444444 4676 8999999999888888743 322 2333221 224568999986554
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.12 E-value=0.055 Score=32.75 Aligned_cols=36 Identities=22% Similarity=0.121 Sum_probs=28.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC---eEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV---KVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~---~v~~~~~~~ 76 (173)
+..++++|+|+|.+|.-++..+..++. +|+++.+.+
T Consensus 18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 446899999999999988877776654 699988765
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.09 E-value=0.13 Score=34.60 Aligned_cols=112 Identities=19% Similarity=0.242 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHHhh-CCCCCCCEEEEE-cC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH------HcCCCEEe
Q 030694 24 LCAGITVYSPLRFY-GLDKPGMHVGVV-GL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE------RLGADSFL 92 (173)
Q Consensus 24 ~~~~~ta~~~l~~~-~~~~~g~~vlI~-G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~------~~g~~~v~ 92 (173)
..++..++..+.+. .. .+..+|+|+ |. |+=|+.+++.++..|++|.++-..+++....+. +++... +
T Consensus 21 e~Ag~~~a~~i~~~~~~-~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~-~ 98 (211)
T d2ax3a2 21 ERAGISVVLAMEEELGN-LSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKV-V 98 (211)
T ss_dssp HHHHHHHHHHHHHHHSC-CTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCE-E
T ss_pred HHHHHHHHHHHHHhccc-ccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCcc-c
Confidence 33444445555443 33 345677777 43 567899999999999988887765443332222 134332 2
Q ss_pred eCCChHHHHHhcCCccEEEEcCCCc-------cchHHHHHhhhcC-CEEEEeCCCCC
Q 030694 93 VSRDQDEMQAAMGTMDGIIDTVSAV-------HPLMPLIGLLKSQ-GKLVLLGAPEK 141 (173)
Q Consensus 93 ~~~~~~~~~~~~~~~d~vid~~g~~-------~~~~~~~~~l~~~-G~~v~~g~~~~ 141 (173)
+..... ....+|+++|+.-+- ..+...++.+... ..++.+-.++|
T Consensus 99 ~~~~~~----~~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG 151 (211)
T d2ax3a2 99 EQFEPS----ILNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG 151 (211)
T ss_dssp SCCCGG----GGGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred cccccc----cccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence 322222 233689999998543 1244566666544 45667765654
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.08 E-value=0.038 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=28.6
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
++|+|+|+.|+.++..+..+|.+|++++..+
T Consensus 45 vvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 45 AIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 8899999999999999999999999999765
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.06 E-value=0.031 Score=35.80 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=54.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~---~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
|-+|.|+|+ |-+|.-+++++..+.. ++....++...-+.... ..... ..+.. .......|+++-+.+..
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~-~~~~~~~~~~~-----~~~~~~~d~~f~~~~~~ 74 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF-KDQDITIEETT-----ETAFEGVDIALFSAGSS 74 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEE-TTEEEEEEECC-----TTTTTTCSEEEECSCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccc-cCCcccccccc-----hhhhhhhhhhhhccCcc
Confidence 347999999 9999999999988853 45555443221111100 01000 11111 11223789999999987
Q ss_pred cchHHHHHhhhcCCEEEEeCC
Q 030694 118 HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g~ 138 (173)
...........++-+++..+.
T Consensus 75 ~s~~~~~~~~~~~~~VIDlSs 95 (154)
T d2gz1a1 75 TSAKYAPYAVKAGVVVVDNTS 95 (154)
T ss_dssp HHHHHHHHHHHTTCEEEECSS
T ss_pred chhhHHhhhccccceehhcCh
Confidence 555555567778889998874
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.02 E-value=0.27 Score=34.49 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EEeeCCChHHHHH-hcCCccEEEE--
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SFLVSRDQDEMQA-AMGTMDGIID-- 112 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~-~~~~~d~vid-- 112 (173)
.++|++||-.-+++=|..+.-+......+|++.+.++.|+..+++. +|.. .++...+...... ..+.+|.|+-
T Consensus 100 ~~~g~~vLD~CAaPGgKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL~Da 179 (284)
T d1sqga2 100 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 179 (284)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred ccccceeEeccCccccchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEEEEec
Confidence 3889999988544334333222222345899999999998777663 5643 3333333222222 2347998862
Q ss_pred -cCCCc-------------------------cchHHHHHhhhcCCEEEEeC
Q 030694 113 -TVSAV-------------------------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 -~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 137 (173)
|+|.. ..+..++..+++||++|..-
T Consensus 180 PCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsT 230 (284)
T d1sqga2 180 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 230 (284)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 44432 13567788899999877553
|
| >d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GidA-like domain: GidA-related protein TTHA1897 species: Thermus thermophilus [TaxId: 274]
Probab=93.91 E-value=0.052 Score=37.21 Aligned_cols=31 Identities=29% Similarity=0.355 Sum_probs=28.3
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|+.|+.|+-.+.+.|+++.++..+.
T Consensus 5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~ 35 (230)
T d2cula1 5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 35 (230)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEEecc
Confidence 7899999999999999999999999998763
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.80 E-value=0.28 Score=34.97 Aligned_cols=96 Identities=19% Similarity=0.153 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHH---cCCCEEe-eCCChHHHHHhcCCccEEEE-
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LGADSFL-VSRDQDEMQAAMGTMDGIID- 112 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~v~-~~~~~~~~~~~~~~~d~vid- 112 (173)
.++|++||=.-+++=|. +.+++...+ ..+++.+.++.|...+++. +|...++ ...+..........||.|+-
T Consensus 114 ~~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvD 192 (313)
T d1ixka_ 114 PKPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 192 (313)
T ss_dssp CCTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccccccccccEEEEc
Confidence 38999988774433232 233343333 4799999999998777653 5644333 22333333334457888863
Q ss_pred --cCCCc-------------------------cchHHHHHhhhcCCEEEEe
Q 030694 113 --TVSAV-------------------------HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 --~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 136 (173)
|+|.. ..+..++..+++||++|..
T Consensus 193 aPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs 243 (313)
T d1ixka_ 193 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 243 (313)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence 34432 1366888999999987654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.72 E-value=0.011 Score=38.55 Aligned_cols=95 Identities=21% Similarity=0.300 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcchHH---HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKS---EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
-+|.|.|+ |.+|.+.++++... +++++.....+.... .+.+..+.... +....+...+....+|++||.+...
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~DViIDFs~p~- 82 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKT-GVTVQSSLDAVKDDFDVFIDFTRPE- 82 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCC-SCCEESCSTTTTTSCSEEEECSCHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccC-CceeeccHHHHhcccceEEEeccHH-
Confidence 36889998 99999999988775 556554432221100 00000010000 0000011112334677888776655
Q ss_pred chHHHHHhhhcCCEEEEeCCCC
Q 030694 119 PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 119 ~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.....++.....+.=+.+|..+
T Consensus 83 ~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 83 GTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp HHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHhccceeEEecCC
Confidence 4555666656666666666433
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.67 E-value=0.75 Score=32.56 Aligned_cols=98 Identities=20% Similarity=0.255 Sum_probs=61.0
Q ss_pred CCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCCh----------------
Q 030694 38 GLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRDQ---------------- 97 (173)
Q Consensus 38 ~~~~~g~~vlI~G-~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~---------------- 97 (173)
+.++++...+|.. +|+.|.+++..++.+|.+++++.. ++.|.+.++. +|++.+......
T Consensus 59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~-~Ga~vi~~~~~~~~~~~~~~~~~~~~~~ 137 (320)
T d1z7wa1 59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLA-FGVELVLTDPAKGMKGAIAKAEEILAKT 137 (320)
T ss_dssp TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHH-TTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhc-cCcceEEeeccccccccchhHHHHHHhC
Confidence 3334555555554 599999999999999996666543 3456777766 888654332210
Q ss_pred ------------------------HHHHHhcCCccEEEEcCCCccchH---HHHHhhhcCCEEEEe
Q 030694 98 ------------------------DEMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLL 136 (173)
Q Consensus 98 ------------------------~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~ 136 (173)
+..++..+.+|.++-++|+...+. ..++...+.-+++-+
T Consensus 138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igv 203 (320)
T d1z7wa1 138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGV 203 (320)
T ss_dssp TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecc
Confidence 011122236999999999875544 344445566676655
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.59 E-value=0.055 Score=38.78 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=30.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
..-+++||+|+ |-+|..++..+...|.+|+++++
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 34578999998 99999999999999999999985
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=93.58 E-value=0.038 Score=38.39 Aligned_cols=60 Identities=10% Similarity=0.185 Sum_probs=39.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcC--CccEEEEcCCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--~~d~vid~~g~ 116 (173)
+|||.|+ |-+|...++.+...| +++.+.+.... + ..|-.+.+.+.+... ++|+||.+.+.
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~-------~----~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE-------F----CGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS-------S----CCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc-------c----cCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 6999998 999999998887777 45555554321 1 123334444444333 78999999875
|
| >d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=93.54 E-value=0.19 Score=35.65 Aligned_cols=91 Identities=14% Similarity=0.161 Sum_probs=58.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCChH-----------------------
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRDQD----------------------- 98 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~----------------------- 98 (173)
.++.++ |..|.+++..++..|.+++++.. ++.+.+.++. +|++.+......+
T Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~-~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~~ 149 (318)
T d1v71a1 71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKG-YGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDH 149 (318)
T ss_dssp CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHH-TTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred eeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHH-cCCcEEeccCCchHHHHHHHHHHHhcCCEecCCccc
Confidence 355554 99999999999999986555543 3446666666 8877554332211
Q ss_pred ------------HHHHhcCCccEEEEcCCCccch---HHHHHhhhcCCEEEEeC
Q 030694 99 ------------EMQAAMGTMDGIIDTVSAVHPL---MPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 99 ------------~~~~~~~~~d~vid~~g~~~~~---~~~~~~l~~~G~~v~~g 137 (173)
.+.+..+.+|.+|-++|+...+ ...++...+..+++-+.
T Consensus 150 ~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~ 203 (318)
T d1v71a1 150 PHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE 203 (318)
T ss_dssp HHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cccccccchHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence 0111123689999999887433 35556667777877663
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.49 E-value=0.34 Score=30.42 Aligned_cols=91 Identities=16% Similarity=0.261 Sum_probs=53.2
Q ss_pred EEEEEcC-ChHHHHHHHHHH-HCC--CeEEEEeCCcchHHHHHHHcC-C-----CEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 45 HVGVVGL-GGLGHVAVKFAK-AMG--VKVTVISTSPSKKSEAVERLG-A-----DSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~-~~g--~~v~~~~~~~~~~~~~~~~~g-~-----~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+|.|+|+ |.+|..++.++. ..+ .++...+..+.....+.+ +. . ...+.... + .. ...+.|+++-+.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~D-l~h~~~~~~~~~~~~~~-~-~~-~~~~aDvvvita 77 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVD-LSHIPTAVKIKGFSGED-A-TP-ALEGADVVLISA 77 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHH-HHTSCSSCEEEEECSSC-C-HH-HHTTCSEEEECC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHH-HHCCccccCCcEEEcCC-C-cc-ccCCCCEEEECC
Confidence 6889996 999988776543 434 489999876543333333 21 1 11221111 1 11 244899999999
Q ss_pred CCcc---------------chH---HHHHhhhcCCEEEEeCCC
Q 030694 115 SAVH---------------PLM---PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~---------------~~~---~~~~~l~~~G~~v~~g~~ 139 (173)
|.+. .+. ..+..-.|.+.++.++++
T Consensus 78 G~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNP 120 (145)
T d2cmda1 78 GVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (145)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred CccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCC
Confidence 9751 112 333344678888888743
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=93.40 E-value=0.49 Score=30.71 Aligned_cols=88 Identities=22% Similarity=0.222 Sum_probs=53.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH---cCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
+|.|+|+ |-+|.-+++++..+-. ++..+..+...-+.+.+. +-.+..+...+.+. ...++|++|-+++...
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~---~~~~~dvvf~a~p~~~- 78 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK---VSKNCDVLFTALPAGA- 78 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHH---HHHHCSEEEECCSTTH-
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhH---hccccceEEEccccHH-
Confidence 6899999 9999999999887654 666665544333333321 11222233333332 2236899999999874
Q ss_pred hHHHHHhhhcCCEEEEeC
Q 030694 120 LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (173)
....... ..+-+++..+
T Consensus 79 s~~~~~~-~~~~~VIDlS 95 (176)
T d1vkna1 79 SYDLVRE-LKGVKIIDLG 95 (176)
T ss_dssp HHHHHTT-CCSCEEEESS
T ss_pred HHHHHHh-hccceEEecC
Confidence 3333333 3556777775
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.25 E-value=0.069 Score=38.27 Aligned_cols=31 Identities=29% Similarity=0.185 Sum_probs=28.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
++|||+|+ |-+|..+++.+...|.+|+++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 68999998 99999999999999999999863
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=93.21 E-value=0.079 Score=38.02 Aligned_cols=75 Identities=19% Similarity=0.158 Sum_probs=46.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCe--EEEEeCCc--chHHHHHHHcCC--CEE-eeCCChHHHHHhcCCccEEEEcC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVK--VTVISTSP--SKKSEAVERLGA--DSF-LVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~--v~~~~~~~--~~~~~~~~~~g~--~~v-~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
-.+|||+|+ |-+|..++..+...|.+ |++.+... .....+....+. ..+ .|-.+.+.+.++..+.|.++...
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a 81 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence 368999998 99999999998888875 45444211 111211121221 111 23345666777777889988887
Q ss_pred CCc
Q 030694 115 SAV 117 (173)
Q Consensus 115 g~~ 117 (173)
...
T Consensus 82 ~~~ 84 (346)
T d1oc2a_ 82 AES 84 (346)
T ss_dssp SCC
T ss_pred hcc
Confidence 654
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.99 E-value=0.13 Score=32.60 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=54.7
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH---cCC---CEEeeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGL--GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER---LGA---DSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~--g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~---~g~---~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
-+|.+||=+++ |.+|+ .+ ..+|+ +|+.++.+++..+.+++. ++. -.++..+....+.....++|++|
T Consensus 13 ~~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~l~~~~~~fDiIf 88 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVF 88 (152)
T ss_dssp CCSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred CCCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccccccccccccceeE
Confidence 46889999976 44444 33 34677 899999998877777663 232 23444443455655567899998
Q ss_pred EcCCC-ccchHHHH------HhhhcCCEEEE
Q 030694 112 DTVSA-VHPLMPLI------GLLKSQGKLVL 135 (173)
Q Consensus 112 d~~g~-~~~~~~~~------~~l~~~G~~v~ 135 (173)
---+- .......+ +.|+++|.++.
T Consensus 89 ~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii 119 (152)
T d2esra1 89 LDPPYAKETIVATIEALAAKNLLSEQVMVVC 119 (152)
T ss_dssp ECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred echhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence 53221 11122222 23567777664
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.92 E-value=0.2 Score=31.67 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=31.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g 87 (173)
++|-++|.|.+|...++-+...|.. ++..++.++...+.+..+
T Consensus 1 ekIg~IGlG~MG~~ma~~L~~~g~~-~~~~~~~~~~~~~~~~~~ 43 (156)
T d2cvza2 1 EKVAFIGLGAMGYPMAGHLARRFPT-LVWNRTFEKALRHQEEFG 43 (156)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSCE-EEECSSTHHHHHHHHHHC
T ss_pred CeEEEEeHHHHHHHHHHHHHhCCCE-EEEeCCHHHHHHHHHHcC
Confidence 4688999999999888888777764 456777776666655454
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.83 E-value=0.33 Score=31.32 Aligned_cols=73 Identities=19% Similarity=0.332 Sum_probs=43.1
Q ss_pred CCCEEEEEcCChHHHHH---HHHHHHC---CCeEEEEeCCcchHHHHHH-------HcCC-CEEeeCCChHHHHHhcCCc
Q 030694 42 PGMHVGVVGLGGLGHVA---VKFAKAM---GVKVTVISTSPSKKSEAVE-------RLGA-DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a---~~~~~~~---g~~v~~~~~~~~~~~~~~~-------~~g~-~~v~~~~~~~~~~~~~~~~ 107 (173)
|+-+|.|+|+|.+|... ..+++.. +-+++.++.++++++.... .++. ..+....+ .++...+.
T Consensus 1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td---~~eaL~da 77 (171)
T d1obba1 1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMN---LDDVIIDA 77 (171)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTTC
T ss_pred CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCC---hhhcccCC
Confidence 45689999999888542 2233322 3489999999887654221 1332 22322222 22234588
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+++.+.+..
T Consensus 78 d~Vv~~~~~g 87 (171)
T d1obba1 78 DFVINTAMVG 87 (171)
T ss_dssp SEEEECCCTT
T ss_pred CeEeeecccc
Confidence 9999887643
|
| >d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Succinate dehydogenase species: Escherichia coli [TaxId: 562]
Probab=92.76 E-value=0.045 Score=39.24 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++.-+...|.+|+++++.+
T Consensus 10 VlVVG~G~AGl~AAl~aa~~G~~V~lleK~~ 40 (330)
T d1neka2 10 AVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (330)
T ss_dssp CEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 7899999999999998888999999998754
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.75 E-value=0.1 Score=32.38 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHH----HHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFA----KAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~----~~~g~~v~~~~~~~~ 77 (173)
++.++++|+|+|.+|.-++..+ +..|.+|+.+.+.+.
T Consensus 35 ~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 35 REVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp HHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred hcCCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 4578999999999986655443 457899999987654
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=92.74 E-value=0.15 Score=32.35 Aligned_cols=87 Identities=20% Similarity=0.262 Sum_probs=48.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC-C---CeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAM-G---VKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~-g---~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|.|+|+ |-+|.-.++++... . .++....++...-+.. . ++.+. +....+. +...++|++|-|++..
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~-~~~~~~~~~~~~~~----~~~~~~DvvF~alp~~ 75 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-N-FGKDAGMLHDAFDI----ESLKQLDAVITCQGGS 75 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-C-SSSCCCBCEETTCH----HHHTTCSEEEECSCHH
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-c-cCCcceeeecccch----hhhccccEEEEecCch
Confidence 6899999 99999999866532 2 3666555443211111 1 22111 1111111 1235899999999988
Q ss_pred cchHHHHHhhhcCC---EEEEeCC
Q 030694 118 HPLMPLIGLLKSQG---KLVLLGA 138 (173)
Q Consensus 118 ~~~~~~~~~l~~~G---~~v~~g~ 138 (173)
. -......+...| .++..+.
T Consensus 76 ~-s~~~~~~l~~~g~~~~VIDlSs 98 (147)
T d1mb4a1 76 Y-TEKVYPALRQAGWKGYWIDAAS 98 (147)
T ss_dssp H-HHHHHHHHHHTTCCSEEEESSS
T ss_pred H-HHHHhHHHHHcCCceEEEeCCc
Confidence 4 344554444444 3777763
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=92.63 E-value=0.11 Score=37.65 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=44.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCc--chHHHHHHHcCC-C-EE--eeCCChHHHHHhcC--CccEEEEcC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSP--SKKSEAVERLGA-D-SF--LVSRDQDEMQAAMG--TMDGIIDTV 114 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~-v~~~~~~~--~~~~~~~~~~g~-~-~v--~~~~~~~~~~~~~~--~~d~vid~~ 114 (173)
+|||+|+ |-+|..+++.+...|.+ |++++... .+...+....+. . .. .|-.+.+.+..+.. .+|+||.+.
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 81 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA 81 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECc
Confidence 6999998 99999999999889986 45554321 112222221111 1 11 23344555544433 799999998
Q ss_pred CCc
Q 030694 115 SAV 117 (173)
Q Consensus 115 g~~ 117 (173)
+..
T Consensus 82 a~~ 84 (361)
T d1kewa_ 82 AES 84 (361)
T ss_dssp SCC
T ss_pred ccc
Confidence 753
|
| >d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.60 E-value=0.066 Score=37.99 Aligned_cols=35 Identities=29% Similarity=0.286 Sum_probs=28.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHH--CCCeEEEEeCCcc
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSPS 77 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~--~g~~v~~~~~~~~ 77 (173)
...|+|+|+|+.|+.++..++. .|.+|+++++++.
T Consensus 50 ~~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~~ 86 (311)
T d2gjca1 50 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86 (311)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence 4459999999999998877664 4889999998753
|
| >d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermotoga maritima [TaxId: 2336]
Probab=92.59 E-value=0.45 Score=33.32 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=32.5
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEe
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFL 92 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~ 92 (173)
|+...+|+.|.+++..++..|.+++++.. ++.|.+.++. +|++.+.
T Consensus 58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~-~GA~V~~ 106 (293)
T d1o58a_ 58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKM-LGAELVL 106 (293)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHH-TTCEEEE
T ss_pred eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeecccc-CCcEEEE
Confidence 43335599999999999999986555543 4556777776 8887544
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.57 E-value=0.27 Score=33.70 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTS 75 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~ 75 (173)
-+|.+|+|.|.|.+|..+++++. ..|++|+.+.-.
T Consensus 30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 30 LKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhcCcceeecccc
Confidence 47899999999999999999764 579988877543
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.52 E-value=0.078 Score=33.68 Aligned_cols=31 Identities=32% Similarity=0.272 Sum_probs=25.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.+|+|+|+|.+|+-+++.++ .+.+|+++.+.
T Consensus 1 ~rVvIIGgG~~G~e~A~~l~-~~~~Vtvv~~~ 31 (167)
T d1xhca1 1 SKVVIVGNGPGGFELAKQLS-QTYEVTVIDKE 31 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHT-TTSEEEEECSS
T ss_pred CeEEEECCcHHHHHHHHHHH-cCCCEEEEecc
Confidence 47999999999998887775 46799998764
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=92.33 E-value=0.42 Score=35.05 Aligned_cols=64 Identities=16% Similarity=0.065 Sum_probs=42.8
Q ss_pred HHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeC
Q 030694 30 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVS 94 (173)
Q Consensus 30 a~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~ 94 (173)
|+..+..+ ..++++.+|+--.+|+.|.+++.+++.+|.+++++.. ++.|.+.++. +|++.+...
T Consensus 130 A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira-~GAeVi~~~ 197 (382)
T d1wkva1 130 AVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRL-LGAQVIVDP 197 (382)
T ss_dssp HHHHHHHHTTTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHH-TTCEEEEET
T ss_pred HHHHHHHHHhccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccc-cCcceeecC
Confidence 34444433 2346676654445599999999999999997666654 3456666766 998766543
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.09 E-value=0.032 Score=36.36 Aligned_cols=29 Identities=21% Similarity=0.109 Sum_probs=23.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEe
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVIS 73 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~ 73 (173)
+|+|+|+|.+|+-++..++..|.++.++.
T Consensus 5 ~VvIIGgG~~G~e~A~~l~~~g~~v~i~~ 33 (183)
T d1d7ya1 5 PVVVLGAGLASVSFVAELRQAGYQGLITV 33 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCSCEEE
T ss_pred CEEEECccHHHHHHHHHHHhcCCceEEEE
Confidence 49999999999999999998887544443
|
| >d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: L-serine dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.02 E-value=0.96 Score=31.78 Aligned_cols=52 Identities=23% Similarity=0.245 Sum_probs=35.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~ 95 (173)
|..-+|..+ |..|.+++..++.+|.+++++.. ++.|.+.++. +|++.+....
T Consensus 53 g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~Ga~v~~~~~ 108 (319)
T d1p5ja_ 53 GCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKN-EGATCKVVGE 108 (319)
T ss_dssp TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHH-TTCEEEECCS
T ss_pred CCCEEEEeCCCcHHHHHHHHhhhccccceecccccccccccccccc-ceeccccccc
Confidence 333455665 99999999999999997666654 3345666666 7876544333
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.92 E-value=0.14 Score=34.38 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH--------------------HCCC-eEEEEeCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK--------------------AMGV-KVTVISTS 75 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~--------------------~~g~-~v~~~~~~ 75 (173)
..+++|+|+|+|.+++=+++.+. ..|+ +|+++.|.
T Consensus 37 ~~gk~VvVIGgGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RR 92 (216)
T d1lqta1 37 LSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR 92 (216)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred ccCceEEEECCCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEEC
Confidence 35899999999999998888776 5677 78888875
|
| >d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein YNL200c (YNU0 YEAST) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.90 E-value=1.2 Score=30.30 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=64.3
Q ss_pred hhhHHHHHHHHHHhhCCC------CCCCEEEEE-c--C-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHH------HH
Q 030694 23 LLCAGITVYSPLRFYGLD------KPGMHVGVV-G--L-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAV------ER 85 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~------~~g~~vlI~-G--~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~------~~ 85 (173)
+..++..+.+.+.+.-.. .++++|+|+ | . |+=|+.+++.++..|.+|.++...+. +.+..+ +.
T Consensus 29 ME~Ag~~ia~~i~~~~~~~~~~~~~~~~~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~ 108 (243)
T d1jzta_ 29 MELAGFSVAQAVCRQFPLRGKTETEKGKHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNF 108 (243)
T ss_dssp HHHHHHHHHHHHHHHSCCSSCCHHHHTCEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccccccccccCCCeEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHH
Confidence 344444555555433221 135678777 4 3 67789999999999998777764432 222111 11
Q ss_pred cCCCEEeeCCChHHHHHh-cCCccEEEEcCCCc-------cchHHHHHhhh---cCCEEEEeCCCCC
Q 030694 86 LGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAV-------HPLMPLIGLLK---SQGKLVLLGAPEK 141 (173)
Q Consensus 86 ~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~-------~~~~~~~~~l~---~~G~~v~~g~~~~ 141 (173)
.+.. +......+..... ..++|+++|+.-+- ..+..+++.+. ....++.+-.++|
T Consensus 109 ~~~~-~~~~~~~~~~~~~~~~~~d~iVDal~G~Gl~~~l~~~~~~li~~iN~~~~~~~vvSiDIPSG 174 (243)
T d1jzta_ 109 FKVP-VLSQDEGNWLEYLKPEKTLCIVDAIFGFSFKPPMREPFKGIVEELCKVQNIIPIVSVDVPTG 174 (243)
T ss_dssp TTCC-EECSSTTCGGGGGSTTTEEEEEEESCCTTCCSSCCTTHHHHHHHHHHHTTTSCEEEESSCTT
T ss_pred CCCc-eecccccchhhccccccccEEEEeeecccccCcccHHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 3332 3333222222111 34799999987753 23445555553 3356777766654
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=91.89 E-value=0.077 Score=31.55 Aligned_cols=36 Identities=19% Similarity=0.018 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
-.|++|+|+|+|..|.-.+..+...+.+++...+..
T Consensus 30 f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 30 FVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred cCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEecC
Confidence 358999999999888776666655666766665544
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.88 E-value=0.14 Score=34.73 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH--------------------CCC-eEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA--------------------MGV-KVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~--------------------~g~-~v~~~~~~~ 76 (173)
..+++|+|+|+|.+++=+++.+.+ .|+ +|+++.|..
T Consensus 37 ~~gk~VvVIGgGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg 93 (225)
T d1cjca1 37 LSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 93 (225)
T ss_dssp TTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred ccCceEEEECCchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence 358999999999999999998887 476 788888764
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.85 E-value=0.13 Score=33.68 Aligned_cols=32 Identities=19% Similarity=0.069 Sum_probs=26.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSP 76 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~ 76 (173)
+|+|+|+|.+|+.++..++..+. +|+++.+.+
T Consensus 2 KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999999999999988888754 788887653
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=91.84 E-value=0.42 Score=31.45 Aligned_cols=100 Identities=16% Similarity=0.220 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHH---HHHh-cCCccEE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDE---MQAA-MGTMDGI 110 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~---~~~~-~~~~d~v 110 (173)
.+++..++=.++|. |-.+..+++.. +++|++++++++.++.+++.+ +.. ..++.+-.+. .... ...+|.+
T Consensus 21 ~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgI 99 (192)
T d1m6ya2 21 PEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 99 (192)
T ss_dssp CCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCccee
Confidence 37787665544453 33444455544 569999999999999888754 322 3343332221 1222 2478888
Q ss_pred EEcCCCc---------------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAV---------------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+=-.|-. ..+..+.+.|+++|+++.+....
T Consensus 100 l~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s 144 (192)
T d1m6ya2 100 LMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHS 144 (192)
T ss_dssp EEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred eeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecccc
Confidence 6445542 23567778899999998887554
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.78 E-value=0.11 Score=37.12 Aligned_cols=30 Identities=30% Similarity=0.289 Sum_probs=23.3
Q ss_pred EEEEcCChHHHHHHH-HHH---HCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVK-FAK---AMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~-~~~---~~g~~v~~~~~~ 75 (173)
|+|+|+|+.|+.++- +++ ..|++|+++++.
T Consensus 24 VlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~ 57 (356)
T d1jnra2 24 ILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 57 (356)
T ss_dssp EEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHHHHhCcCEEEEEeCC
Confidence 899999999987654 333 479999999864
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.70 E-value=0.0098 Score=41.09 Aligned_cols=44 Identities=16% Similarity=0.021 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER 85 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~ 85 (173)
.++++||-+|+|. |.....+++..+.+|++++-++..++.+++.
T Consensus 50 ~~g~~vLDlGcG~-G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~ 93 (257)
T d2a14a1 50 LQGDTLIDIGSGP-TIYQVLAACDSFQDITLSDFTDRNREELEKW 93 (257)
T ss_dssp CCEEEEEESSCTT-CCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-CHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence 5788999999863 4444444444334899999999988888774
|
| >d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.31 E-value=0.12 Score=34.87 Aligned_cols=31 Identities=29% Similarity=0.318 Sum_probs=24.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTS 75 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g---~~v~~~~~~ 75 (173)
+|+|+|+|+.|+.++..+..+| .+|.++++.
T Consensus 3 ~viVIG~GpaG~~aA~~aa~~~~~~~~V~liEk~ 36 (233)
T d1xdia1 3 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCD 36 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCCEEEEEecC
Confidence 6899999999998887776655 468888864
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.30 E-value=0.017 Score=39.13 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=20.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCe
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVK 68 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~ 68 (173)
+|+|+|+|.+|+.++..++..|.+
T Consensus 2 kV~VIGaGi~GlstA~~L~~~G~~ 25 (246)
T d1kifa1 2 RVVVIGAGVIGLSTALCIHERYHS 25 (246)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTT
T ss_pred EEEEECchHHHHHHHHHHHHCCCC
Confidence 689999999999988888878764
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.01 E-value=1 Score=31.91 Aligned_cols=96 Identities=20% Similarity=0.086 Sum_probs=56.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---C-EEeeCCChHHHHHh---cCCccE
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---D-SFLVSRDQDEMQAA---MGTMDG 109 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~-~v~~~~~~~~~~~~---~~~~d~ 109 (173)
..++.+||=+.+|. |...+.++ ..|++|+.++.+...++.+++++ |. . ..+..+..+++++. ...||+
T Consensus 130 ~~~~~rVLdlf~~t-G~~sl~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~~~~~~fD~ 207 (309)
T d2igta1 130 ADRPLKVLNLFGYT-GVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDI 207 (309)
T ss_dssp SSSCCEEEEETCTT-CHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred ccCCCeEEEecCCC-cHHHHHHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHhhcCCCCCE
Confidence 35688999886632 22333333 46889999999999888888743 31 1 23333334454433 247999
Q ss_pred EEEcCCC--------c--------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSA--------V--------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~--------~--------~~~~~~~~~l~~~G~~v~~g 137 (173)
||---+. . ..+..+..+++++|.++++.
T Consensus 208 IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t 251 (309)
T d2igta1 208 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 251 (309)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred EEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 9742110 0 12234556788888655443
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.86 E-value=0.88 Score=29.04 Aligned_cols=92 Identities=15% Similarity=0.121 Sum_probs=50.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCC--C--eEEEEeCCcchH-----------HHHHHHcCCCEEeeCCChHHHHH-hc--CC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG--V--KVTVISTSPSKK-----------SEAVERLGADSFLVSRDQDEMQA-AM--GT 106 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g--~--~v~~~~~~~~~~-----------~~~~~~~g~~~v~~~~~~~~~~~-~~--~~ 106 (173)
+|.++|.|.+|...+++..... . ++.++..+.... ...++.+... .......+...+ +. ..
T Consensus 6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 84 (168)
T d1ebfa1 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAAS-TTKTLPLDDLIAHLKTSPK 84 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTC-CCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhc-ccccccHHHHHHHhccCCC
Confidence 6788999999999988777643 2 455554321110 0001101111 011111222222 22 26
Q ss_pred ccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.++++||+++..........|..|=.+|...
T Consensus 85 ~~vivd~t~~~~~~~~~~~aL~~G~hVVTAN 115 (168)
T d1ebfa1 85 PVILVDNTSSAYIAGFYTKFVENGISIATPN 115 (168)
T ss_dssp CEEEEECSCCHHHHTTHHHHHHTTCEEECCC
T ss_pred ceEEEEecCChHHHHHHHHHHHcCCeEEecC
Confidence 8899999999865555666677766666553
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=90.81 E-value=0.57 Score=33.73 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=25.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHH-HHCCCeEEEEe
Q 030694 43 GMHVGVVGL-GGLGHVAVKFA-KAMGVKVTVIS 73 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~-~~~g~~v~~~~ 73 (173)
+-+|||.|+ |-+|..+++.+ +..|.+|++++
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D 34 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence 458999998 99998877654 56889999986
|
| >d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermus thermophilus [TaxId: 274]
Probab=90.66 E-value=1.8 Score=30.04 Aligned_cols=93 Identities=14% Similarity=0.137 Sum_probs=56.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEeeCCChH----------------------
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFLVSRDQD---------------------- 98 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~---------------------- 98 (173)
+.|+...+|..|.+++..++.+|.+.+++.. ++.+...++. +|+..+......+
T Consensus 63 ~~vv~~SsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (302)
T d1ve1a1 63 QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKA-FGAELVLTDPERRMLAAREEALRLKEELGAFMPDQ 141 (302)
T ss_dssp CEEEESCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHH-TTCEEEEECTTTHHHHHHHHHHHHHHHHTCBCCCT
T ss_pred cEEEEecCCcchhhhhhhhhccCcceeEeeecccchheeehhhh-hhhcchhcccccchHHHHHHhhhhhhccCcccccc
Confidence 3344445599999999999999996555543 2334555555 7765443332110
Q ss_pred -----------------HHHHhcCCccEEEEcCCCccchH---HHHHhhhcCCEEEEeC
Q 030694 99 -----------------EMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 99 -----------------~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 137 (173)
..+++.+.+|.+|-++|+...+. ..++.+.|.-+++-+.
T Consensus 142 ~~~~~~~~~~~~t~~~EI~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~iigve 200 (302)
T d1ve1a1 142 FKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVE 200 (302)
T ss_dssp TTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred CccchhHHHHHHHHHHHHHHHcCCCCCeEEEeecCcHHHHHHHHHHHhcCCCCEEEEEE
Confidence 11222236999999999875444 4455566777877654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=90.55 E-value=0.89 Score=29.10 Aligned_cols=73 Identities=11% Similarity=0.220 Sum_probs=43.3
Q ss_pred CCCEEEEEcCChHHH--HHHHHHHHCC----CeEEEEeCCcchHHHHHH-------HcCCC-EEeeCCChHHHHHhcCCc
Q 030694 42 PGMHVGVVGLGGLGH--VAVKFAKAMG----VKVTVISTSPSKKSEAVE-------RLGAD-SFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~--~a~~~~~~~g----~~v~~~~~~~~~~~~~~~-------~~g~~-~v~~~~~~~~~~~~~~~~ 107 (173)
+.-+|.|+|+|++|. ....+++..- .+++..+.+++|++.... ..+.. .+....+. .+...+.
T Consensus 2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~eal~~A 78 (167)
T d1u8xx1 2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDP---EEAFTDV 78 (167)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCH---HHHHSSC
T ss_pred CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCCh---hhccCCC
Confidence 455789999876653 3334444332 389999999988653211 12322 33333222 1234589
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+|+.+.|.+
T Consensus 79 D~Vvitag~~ 88 (167)
T d1u8xx1 79 DFVMAHIRVG 88 (167)
T ss_dssp SEEEECCCTT
T ss_pred CEEEECCCcC
Confidence 9999999864
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=90.49 E-value=0.62 Score=31.90 Aligned_cols=67 Identities=22% Similarity=0.337 Sum_probs=40.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCC-eEEEEeC--CcchHHHHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCC
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGV-KVTVIST--SPSKKSEAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVS 115 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g 115 (173)
|||.|+ |-+|..++..+...|. +|++++. +..+.....+ +......+.. +...... ..++.++-+.+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-LNIADYMDKE--DFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-SCCSEEEEHH--HHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-cchhhhccch--HHHHHHhhhhcccchhhhhhhcc
Confidence 789998 9999999998888897 6888863 2233333333 3333233322 2222221 26777776654
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.43 E-value=0.11 Score=32.97 Aligned_cols=31 Identities=23% Similarity=0.437 Sum_probs=27.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 69 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v 69 (173)
....|++|+|+|+|.+|.-++..+.+.|+++
T Consensus 25 ~~~~gkrVvVIGgG~~g~d~a~~~~r~G~~~ 55 (162)
T d1ps9a2 25 KAPVGNKVAIIGCGGIGFDTAMYLSQPGEST 55 (162)
T ss_dssp CCCCCSEEEEECCHHHHHHHHHHHTCCSSCG
T ss_pred ccccCCceEEEcCchhHHHHHHHHHHcCCcc
Confidence 3467999999999999999999999999854
|
| >d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: L-aspartate oxidase species: Escherichia coli [TaxId: 562]
Probab=90.36 E-value=0.13 Score=36.25 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=24.6
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
|+|+|+|..|+.++-.++..| +|++++..+
T Consensus 10 VvVVG~G~AGl~AA~~a~~~g-~V~llEK~~ 39 (305)
T d1chua2 10 VLIIGSGAAGLSLALRLADQH-QVIVLSKGP 39 (305)
T ss_dssp EEEECCSHHHHHHHHHHTTTS-CEEEECSSC
T ss_pred EEEECccHHHHHHHHHhhcCC-CEEEEECCC
Confidence 889999999988887776666 999998764
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=90.30 E-value=1.9 Score=29.80 Aligned_cols=53 Identities=28% Similarity=0.316 Sum_probs=36.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSF 91 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v 91 (173)
...+++.+++...+|..|.+++..++..|.+++++.. ++.+...++. +|++.+
T Consensus 56 g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~-~ga~v~ 111 (302)
T d1fcja_ 56 GVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKA-LGANLV 111 (302)
T ss_dssp TCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHH-TTCEEE
T ss_pred CCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHH-hccceE
Confidence 3446677766666799999999999999986555543 3445666665 776544
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=89.84 E-value=0.12 Score=34.29 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=24.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEE
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 71 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~ 71 (173)
.++.+++.|+|++|++++|+++..|++.++
T Consensus 162 ~~~~~~i~g~g~~g~~aiq~a~~~g~~~ii 191 (194)
T d1f8fa1 162 FDQLVKFYAFDEINQAAIDSRKGITLKPII 191 (194)
T ss_dssp GGGGEEEEEGGGHHHHHHHHHHTSCSEEEE
T ss_pred cccEEEEeCcHHHHHHHHHHHHHcCCCEEE
Confidence 356667777799999999999999995444
|
| >d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Escherichia coli [TaxId: 562]
Probab=89.77 E-value=0.2 Score=35.40 Aligned_cols=30 Identities=33% Similarity=0.474 Sum_probs=24.4
Q ss_pred EEEEcCChHHHHHHHHHHHC--CCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAM--GVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~ 75 (173)
|||+|+|..|+.++--++.. |++|+++++.
T Consensus 8 VlVIG~G~AGl~AA~~a~~~~~g~~V~lleK~ 39 (311)
T d1kf6a2 8 LAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39 (311)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred EEEECccHHHHHHHHHHHHhCCCCEEEEEECC
Confidence 79999999999887666654 6789999865
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=89.52 E-value=0.23 Score=35.41 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=26.0
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|+|+|.-|+.++..+...|.+|.+++..
T Consensus 7 viIVGsG~aG~v~A~~La~~G~kVlvLEaG 36 (379)
T d2f5va1 7 VVIVGSGPIGCTYARELVGAGYKVAMFDIG 36 (379)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEECcCHHHHHHHHHHhhCCCeEEEEecC
Confidence 788899999988887777789999999864
|
| >d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=89.40 E-value=0.29 Score=32.54 Aligned_cols=29 Identities=31% Similarity=0.300 Sum_probs=23.9
Q ss_pred EEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGV-KVTVIST 74 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~ 74 (173)
++|+|+|+.|+.++..+...|. +|.+++.
T Consensus 6 viIIG~GpaGl~aA~~aa~~g~k~V~iie~ 35 (238)
T d1aoga1 6 LVVIGAGSGGLEAAWNAATLYKKRVAVIDV 35 (238)
T ss_dssp EEEECCSHHHHHHHHHHHHTSCCCEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEEe
Confidence 7888999999999888887776 6777765
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=89.36 E-value=1.5 Score=27.17 Aligned_cols=90 Identities=11% Similarity=0.076 Sum_probs=53.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCc--chHH----HHHHHcC---CCEEeeCCChHHHHHhcCCccEEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSP--SKKS----EAVERLG---ADSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~--~~~~----~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
.+|.|+|+ |.+|..++..+...+. ++...+.+. ++.+ .+.+... ...+. ..+.+ ...+.|+++
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~-~~~~~----~~~~aDiVv 75 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR-QGGYE----DTAGSDVVV 75 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE-ECCGG----GGTTCSEEE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEe-eCCHH----HhhhcCEEE
Confidence 36899995 9999999888888876 788888542 2221 1221111 22222 12222 134899999
Q ss_pred EcCCCcc---------------chHH---HHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVH---------------PLMP---LIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~---------------~~~~---~~~~l~~~G~~v~~g~ 138 (173)
-+.|.+. .+.. .+....|.+.++.+.+
T Consensus 76 itaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtN 120 (142)
T d1o6za1 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (142)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Confidence 9988641 1222 2333456788887753
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=89.22 E-value=1.2 Score=28.13 Aligned_cols=70 Identities=14% Similarity=0.056 Sum_probs=42.2
Q ss_pred EEEEEcCChHH--HHHHHHHHHC----CCeEEEEeCCcchHHHHHHH-----cCCCEEeeCCChHHHHHhcCCccEEEEc
Q 030694 45 HVGVVGLGGLG--HVAVKFAKAM----GVKVTVISTSPSKKSEAVER-----LGADSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 45 ~vlI~G~g~~G--~~a~~~~~~~----g~~v~~~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
+|.|+|+|.+| .+...+++.. ..++...+.+++|.+...+. .....+.-..+. .+...+.|+++.+
T Consensus 2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~---~~~l~~aDvVVit 78 (162)
T d1up7a1 2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTF---EGAVVDAKYVIFQ 78 (162)
T ss_dssp EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSH---HHHHTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCc---ccccCCCCEEEEe
Confidence 58899997555 3333344433 24899999999887655441 112233322222 1234588999999
Q ss_pred CCCc
Q 030694 114 VSAV 117 (173)
Q Consensus 114 ~g~~ 117 (173)
.|.+
T Consensus 79 a~~~ 82 (162)
T d1up7a1 79 FRPG 82 (162)
T ss_dssp CCTT
T ss_pred cccC
Confidence 9864
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=89.15 E-value=0.26 Score=35.30 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=26.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
-|+|+|+|..|..++.-+...|.+|.++++-
T Consensus 4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeCcCHHHHHHHHHHHHCcCeEEEEecC
Confidence 3789999999988777777789999999974
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=88.79 E-value=0.18 Score=30.95 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=48.9
Q ss_pred CEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-cCCccEEEEcCCCccchH
Q 030694 44 MHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~ 121 (173)
.+|+|+|+|..|.+++.... ..+++++++.-++.++.- .....-.|+..+ .+.+. ...+++++-+++... .+
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G--~~I~Gi~V~~~~---~l~~~~~~~i~iai~~i~~~~-~~ 77 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVG--RPVRGGVIEHVD---LLPQRVPGRIEIALLTVPREA-AQ 77 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT--CEETTEEEEEGG---GHHHHSTTTCCEEEECSCHHH-HH
T ss_pred ceEEEEcCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC--CEECCEEEecHH---HHHHHHhhcccEEEEeCCHHH-HH
Confidence 48999999999987766433 346677777654432210 012233455433 23333 347899999988773 56
Q ss_pred HHHHhhhcCC
Q 030694 122 PLIGLLKSQG 131 (173)
Q Consensus 122 ~~~~~l~~~G 131 (173)
...+.+-..|
T Consensus 78 ~I~d~l~~~g 87 (126)
T d2dt5a2 78 KAADLLVAAG 87 (126)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 6666555444
|
| >d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=88.69 E-value=0.38 Score=29.27 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
-.+++|+|+|+|..+.-.+..+.....+|+++.+.++
T Consensus 25 ~~~k~V~VvGgGdsA~e~A~~L~~~a~~V~li~r~~~ 61 (126)
T d1trba2 25 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 61 (126)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred hCCCEEEEECCCHHHHHHHHHHhhcCCcEEEEeeccc
Confidence 4689999999998887777777777779999998764
|
| >d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=88.15 E-value=0.25 Score=33.22 Aligned_cols=31 Identities=29% Similarity=0.260 Sum_probs=24.7
Q ss_pred EEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~ 76 (173)
++|+|+|+-|+.++..+...|. +|.+++...
T Consensus 6 vvVIG~GpAG~~aAi~aa~~g~k~V~vie~~~ 37 (240)
T d1feca1 6 LVVIGAGSGGLEAGWNAASLHKKRVAVIDLQK 37 (240)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCCCEEEEESCS
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEEEec
Confidence 7888999999999887777776 687877543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=88.13 E-value=0.72 Score=28.97 Aligned_cols=24 Identities=25% Similarity=0.225 Sum_probs=19.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMG 66 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g 66 (173)
--+|.|+|| |.+|..++..+...+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcc
Confidence 347999998 999999888777554
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.12 E-value=2.2 Score=27.55 Aligned_cols=86 Identities=26% Similarity=0.232 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
++++|.|+|-|.=|.+-++=+|-.|.+|++--+...+ .+.+++ -|.+ +.. +.+.....|++.-.++.. ..
T Consensus 15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~-~Gf~-v~~------~~eA~~~aDiim~L~PD~-~q 85 (182)
T d1np3a2 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA-HGLK-VAD------VKTAVAAADVVMILTPDE-FQ 85 (182)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH-TTCE-EEC------HHHHHHTCSEEEECSCHH-HH
T ss_pred CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh-hccc-ccc------HHHHhhhcCeeeeecchH-HH
Confidence 4789999999999999999999999999988776553 455555 5654 321 223344789999888876 23
Q ss_pred HHHH-----HhhhcCCEEEEe
Q 030694 121 MPLI-----GLLKSQGKLVLL 136 (173)
Q Consensus 121 ~~~~-----~~l~~~G~~v~~ 136 (173)
...+ ..|++|..+.+.
T Consensus 86 ~~vy~~~I~p~lk~g~~L~Fa 106 (182)
T d1np3a2 86 GRLYKEEIEPNLKKGATLAFA 106 (182)
T ss_dssp HHHHHHHTGGGCCTTCEEEES
T ss_pred HHHHHHhhhhhcCCCcEEEEe
Confidence 3444 445666665544
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=88.06 E-value=2.1 Score=27.66 Aligned_cols=97 Identities=21% Similarity=0.267 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHh-----cCCccEEEE
Q 030694 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAA-----MGTMDGIID 112 (173)
Q Consensus 40 ~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~-----~~~~d~vid 112 (173)
.++|..+ |-+. |+-|. ...++. .+.+|++++++++....+++.... -..++....+ +.+. .+++|.++=
T Consensus 16 ~~~g~~~-vD~T~G~GGh-s~~iL~-~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~-~~~~l~~~~~~~vdgIl~ 91 (182)
T d1wg8a2 16 VRPGGVY-VDATLGGAGH-ARGILE-RGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRH-LKRHLAALGVERVDGILA 91 (182)
T ss_dssp CCTTCEE-EETTCTTSHH-HHHHHH-TTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGG-HHHHHHHTTCSCEEEEEE
T ss_pred CCCCCEE-EEeCCCCcHH-HHHHhc-ccCcEEEEhhhhhHHHHHhhccccceeEeehHHHH-HHHHHHHcCCCccCEEEE
Confidence 3777764 4454 55453 444444 467999999999988888773222 2234433322 2222 237888875
Q ss_pred cCCCcc---------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 113 TVSAVH---------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 113 ~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
-.|-.+ .++.....++++|+++.+...+
T Consensus 92 DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs 134 (182)
T d1wg8a2 92 DLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS 134 (182)
T ss_dssp ECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred EccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc
Confidence 555532 2567788899999999887654
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.83 E-value=0.39 Score=31.80 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
-.|++|+|+|+|..|.=++..+...+++++...++.
T Consensus 30 ~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 30 FSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHhhhcccccccccc
Confidence 479999999999998777777777888877776654
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=87.81 E-value=0.7 Score=29.91 Aligned_cols=90 Identities=13% Similarity=0.062 Sum_probs=52.5
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH---cC--CCEEeeCCChHHHHHhcCCccEEEEc
Q 030694 42 PGMHVGVVGL--GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER---LG--ADSFLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~--g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~---~g--~~~v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
.+.++|=+++ |.+| .+ |..+|+ +|+.++.+.+..+.++++ ++ ...++..+..+++......+|++|--
T Consensus 43 ~~~~vLDlfaGsG~~g---ie-alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~~~l~~~~~~fDlIf~D 118 (183)
T d2fpoa1 43 VDAQCLDCFAGSGALG---LE-ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVD 118 (183)
T ss_dssp TTCEEEETTCTTCHHH---HH-HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred chhhhhhhhcccccee---ee-EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeecccccccccccccCEEEEc
Confidence 4677777754 5555 34 444777 899999999888877764 23 22344443344444334589999854
Q ss_pred CC-CccchHHHHHh------hhcCCEEEE
Q 030694 114 VS-AVHPLMPLIGL------LKSQGKLVL 135 (173)
Q Consensus 114 ~g-~~~~~~~~~~~------l~~~G~~v~ 135 (173)
-+ ........+.. |+++|.++.
T Consensus 119 PPY~~~~~~~~l~~l~~~~~L~~~~iIii 147 (183)
T d2fpoa1 119 PPFRRGLLEETINLLEDNGWLADEALIYV 147 (183)
T ss_dssp CSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CccccchHHHHHHHHHHCCCCCCCeEEEE
Confidence 33 12223344433 566666554
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=87.77 E-value=0.24 Score=34.97 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=43.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCe------EEEEeCC--cchHHHHHHHcCC---CEEe--eCCChHHHHHhcCCccEE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVK------VTVISTS--PSKKSEAVERLGA---DSFL--VSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~------v~~~~~~--~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~~~~~d~v 110 (173)
+|||+|+ |-+|..+++.+...|.. ++.++.. ..+...+.. ... -..+ +..+..........+|.+
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP-VDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG-GTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhh-hhcCCCeEEEEeccccchhhhccccccceE
Confidence 6999998 99999999988888764 4444422 111111111 211 1122 233344555556689999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+.+.+..
T Consensus 81 i~~a~~~ 87 (322)
T d1r6da_ 81 VHFAAES 87 (322)
T ss_dssp EECCSCC
T ss_pred Eeecccc
Confidence 9887654
|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=87.23 E-value=0.54 Score=28.56 Aligned_cols=37 Identities=27% Similarity=0.292 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
-.|++|+|+|+|..+.-.+..+.....+|+++.+.++
T Consensus 28 ~~gk~V~VvGgG~sA~~~A~~L~~~a~~V~li~r~~~ 64 (126)
T d1fl2a2 28 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 64 (126)
T ss_dssp GBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred cCCceEEEEeCCHHHHHHHHhhhccCCceEEEecccc
Confidence 5689999999988877666666667669999987654
|
| >d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Thermus thermophilus [TaxId: 274]
Probab=86.86 E-value=3.5 Score=28.50 Aligned_cols=49 Identities=29% Similarity=0.258 Sum_probs=34.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CcchHHHHHHHcCCCEEe
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST---SPSKKSEAVERLGADSFL 92 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~ 92 (173)
...|+...+|..|.+++..++.+|.+++++.. ++++...++. +|+..+.
T Consensus 64 ~~~vv~aSsGN~g~a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~-~Ga~vi~ 115 (310)
T d1ve5a1 64 PKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARA-YGAEVVD 115 (310)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHH-TTCEEEC
T ss_pred cCCccccCchhhHHHHHHHHHHcCCeEEEeecccchHHHHHHHhh-hccccce
Confidence 34455545699999999999999997766654 3556766666 8876543
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=86.42 E-value=0.45 Score=34.07 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=26.7
Q ss_pred CCCCE--EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 41 KPGMH--VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 41 ~~g~~--vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
..|++ ++|+|+|..|+.++.-+...|.+|.++++-
T Consensus 3 ~~~~~~dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 3 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555 588899999888776555579999999974
|
| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=85.40 E-value=1.5 Score=29.69 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=38.0
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g 87 (173)
....++++++||-+|.| .|.+...+++ .+.+|++++.++.-.+.+++.+.
T Consensus 15 ~~~~~~~~d~VlEIGpG-~G~LT~~Ll~-~~~~v~avE~D~~l~~~l~~~~~ 64 (235)
T d1qama_ 15 TNIRLNEHDNIFEIGSG-KGHFTLELVQ-RCNFVTAIEIDHKLCKTTENKLV 64 (235)
T ss_dssp TTCCCCTTCEEEEECCT-TSHHHHHHHH-HSSEEEEECSCHHHHHHHHHHTT
T ss_pred HhcCCCCCCeEEEECCC-chHHHHHHHh-CcCceEEEeeccchHHHHHHHhh
Confidence 33445899999999987 5667777776 47799999998877777776443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.38 E-value=0.76 Score=28.69 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=44.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCCcc--hHH----HHHHHcC---C-CEEeeCCChHHHHHhcCCccEEE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPS--KKS----EAVERLG---A-DSFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~--~v~~~~~~~~--~~~----~~~~~~g---~-~~v~~~~~~~~~~~~~~~~d~vi 111 (173)
+|.|+|+ |.+|..++.++...+. ++..++.+++ +.+ .+.+... . ..+......+ . +...+.|+++
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d-~-~~l~~aDvVV 79 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN-L-RIIDESDVVI 79 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC-G-GGGTTCSEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch-H-HHhccceEEE
Confidence 5899997 9999999999888885 8999988753 222 1222111 1 1221111111 1 1244899999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
-+.|.+
T Consensus 80 itAG~~ 85 (145)
T d1hyea1 80 ITSGVP 85 (145)
T ss_dssp ECCSCC
T ss_pred Eecccc
Confidence 999875
|
| >d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase T species: Thermus thermophilus [TaxId: 274]
Probab=85.37 E-value=2.7 Score=30.82 Aligned_cols=80 Identities=11% Similarity=-0.012 Sum_probs=49.3
Q ss_pred HHHhhCCCCCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCCh---HHHHHhcCC
Q 030694 33 PLRFYGLDKPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ---DEMQAAMGT 106 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~ 106 (173)
.+.....+++|++|+|... -++..++++.+...|++.+.+.-.+.+.....-.++.+..+..... +.+.+....
T Consensus 13 lV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~~~d~~i~r~~~~~a~~e~l~~~p~~~~~~~~~~~~~ 92 (406)
T d2ayia1 13 AIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVIYGDQELARKRLALAPEEGLDKAPAWLYEGMARAFRE 92 (406)
T ss_dssp HHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEECCHHHHHHHHHHSCTTCTTCCCHHHHHHHHHHHHT
T ss_pred HHHHcccCCCCCEEEEEcccchHHHHHHHHHHHHHcCCCeEEEeecChHHHHHHHhcCCHHHHhhcchhhHHHHHHHHHc
Confidence 3455566899999999953 3778889999999999776665555544444333565545443332 222223335
Q ss_pred ccEEEE
Q 030694 107 MDGIID 112 (173)
Q Consensus 107 ~d~vid 112 (173)
.|.++.
T Consensus 93 ~~a~i~ 98 (406)
T d2ayia1 93 GAARLA 98 (406)
T ss_dssp TCEEEE
T ss_pred CCcEEE
Confidence 555554
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.31 E-value=2.5 Score=25.33 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=39.4
Q ss_pred CCCCEEEEE-cCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 41 KPGMHVGVV-GLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 41 ~~g~~vlI~-G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
...+.++.. ..-..-+.+++.++..|. ++++...+++..+.+++ +|++.++++.
T Consensus 64 ~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~-~G~d~vi~p~ 119 (132)
T d1lssa_ 64 EDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFER-LGVDVVVSPE 119 (132)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHH-TTCSEEECHH
T ss_pred hhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHH-CCCCEEECHH
Confidence 555655554 233455678888899988 78888888887888877 9999988753
|
| >d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Salmonella typhimurium [TaxId: 90371]
Probab=84.85 E-value=3.5 Score=29.90 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=32.8
Q ss_pred CEEEE-EcCChHHHHHHHHHHHCCCeEEEEeC--C----cchHHHHHHHcCCCEEee
Q 030694 44 MHVGV-VGLGGLGHVAVKFAKAMGVKVTVIST--S----PSKKSEAVERLGADSFLV 93 (173)
Q Consensus 44 ~~vlI-~G~g~~G~~a~~~~~~~g~~v~~~~~--~----~~~~~~~~~~~g~~~v~~ 93 (173)
+++++ .++|..|.+++..|+..|.+.+++-. . ..+...++. +|++.+..
T Consensus 103 ~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~-~GAeVv~v 158 (390)
T d1qopb_ 103 SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRL-MGAEVIPV 158 (390)
T ss_dssp CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHH-TTCEEEEE
T ss_pred ceeeeehhHHHHHHHHHHHHHhccCceEEeecccccccchHHHHHHHh-cCceEEEe
Confidence 45555 46699999999999999986555532 2 233455555 89875543
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.83 E-value=0.75 Score=30.39 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=25.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVIST 74 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~ 74 (173)
.+++|+|+|..|..++..++..+. +|+++++
T Consensus 5 ~~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~ 37 (213)
T d1m6ia1 5 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 37 (213)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCcEEEEeC
Confidence 457899999999999988888775 6888865
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=84.68 E-value=1.4 Score=26.18 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=52.1
Q ss_pred CEEEEEcC----ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 44 MHVGVVGL----GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 44 ~~vlI~G~----g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
++|.|+|+ +..|..+.+.++..|++|+.+..+.+.. +|. .+ + ..+.++...+|+++-+++....
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------~G~-~~--y---~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------EGL-KC--Y---RSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTE-EC--B---SSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------cCc-cc--c---ccchhccccceEEEEEeCHHHH
Confidence 57899985 4678899999999999988876543321 231 11 1 2233455689999989888754
Q ss_pred hHHHHHhhhcCCEEEEe
Q 030694 120 LMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~ 136 (173)
.+..-++.+.|-+.+.+
T Consensus 70 ~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCceEEe
Confidence 44444555555555444
|
| >d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CmcI-like domain: Cephalosporin hydroxylase CmcI species: Streptomyces clavuligerus [TaxId: 1901]
Probab=84.36 E-value=2.8 Score=28.19 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=54.5
Q ss_pred CCEEEEEcC--ChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcCCCEEeeC--CChHHHHHhcC-Ccc-EEEEcC
Q 030694 43 GMHVGVVGL--GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGADSFLVS--RDQDEMQAAMG-TMD-GIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~--g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~~~v~~~--~~~~~~~~~~~-~~d-~vid~~ 114 (173)
-++|+-+|. |+..++.+.+++..+ .+++.++.+.++..........-.++.. .+.+..+++.. ..| +++|..
T Consensus 81 Pk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDId~~~~~~~~~~~~~I~~i~gDs~~~~~~~~l~~~~~dlIfID~~ 160 (232)
T d2bm8a1 81 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 160 (232)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCcChhhhhhhhccccceeeeecccccHHHHHHHHhcCCCEEEEcCC
Confidence 478999995 777777778888765 4899999876554333221222223322 22344444443 344 556654
Q ss_pred CCccc-hH--HHHHhhhcCCEEEEeC
Q 030694 115 SAVHP-LM--PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~~~-~~--~~~~~l~~~G~~v~~g 137 (173)
-.... +. .....|++||.++.--
T Consensus 161 H~~~~v~~~~~~~~lLk~GG~iIveD 186 (232)
T d2bm8a1 161 HANTFNIMKWAVDHLLEEGDYFIIED 186 (232)
T ss_dssp CSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred cchHHHHHHHHHhcccCcCCEEEEEc
Confidence 33211 11 2346789999877653
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.22 E-value=3 Score=25.37 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=30.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.++.+|+|.|- |.-|...++.++.+|-++++-+..
T Consensus 13 ~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtP 48 (130)
T d1euca1 13 DKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTP 48 (130)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred cCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeecc
Confidence 67889999998 999999999999999998877655
|
| >d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine synthase species: Thermus thermophilus [TaxId: 274]
Probab=83.87 E-value=2.9 Score=29.44 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=38.1
Q ss_pred HHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe--CCc--chHHHHHHHcCCCEEee
Q 030694 29 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS--TSP--SKKSEAVERLGADSFLV 93 (173)
Q Consensus 29 ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~--~~~--~~~~~~~~~~g~~~v~~ 93 (173)
.|++.+.+... ...+.+++..+|+.|.+++.+++..|.+.+++. ... ++...++. +|++.+..
T Consensus 64 ~a~~~i~~a~~-~g~~~iv~~SsGN~g~a~a~~a~~~g~~~~i~~p~~~~~~~~~~~~~~-~Ga~vi~~ 130 (351)
T d1v7ca_ 64 GMTLAVSKAVE-GGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLV-HGARIVQV 130 (351)
T ss_dssp HHHHHHHHHHH-TTCSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTCSCHHHHHHHHH-TTCEEEEE
T ss_pred HHHHHHHHHHh-cCCCeeeeeccccHHHHHHHHHhhhcccceeecCCchHHHHHHHhhhc-CCCceEee
Confidence 44555554433 345666555569999999999999998543332 222 23344555 88765443
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.85 E-value=1.1 Score=27.30 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=29.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+-.|+.|+|+|+|..+.-.+..+.....+|+++.+.++
T Consensus 31 ~frgk~V~VvGgGdsA~e~A~~L~~~a~~V~li~r~~~ 68 (130)
T d1vdca2 31 IFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 68 (130)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred HhCCCEEEEEcCchHHHHHHHHHhCCCCcEEEEEeccc
Confidence 45689999999988776666666666679999988754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.80 E-value=1.9 Score=26.57 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=54.9
Q ss_pred CCCEEEEEcC----ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGL----GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~----g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+.++|.|+|+ +..|..+.+.++..|++|+.+....+.. +|. .++ +.+.++...+|+++=+++..
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------~G~-~~~-----~sl~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------LGR-KCY-----PSVLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTE-ECB-----SSGGGCSSCCSEEEECSCHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------CCC-ccc-----ccccccCccceEEEEEeCHH
Confidence 4688999996 3678889999999999988886653211 331 111 22334556899999888877
Q ss_pred cchHHHHHhhhcCCEEEEeC
Q 030694 118 HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g 137 (173)
...+..-.+++.|-+.+.+.
T Consensus 86 ~~~~~~~e~~~~g~k~v~~~ 105 (139)
T d2d59a1 86 LTMEYVEQAIKKGAKVVWFQ 105 (139)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEe
Confidence 44333445556666666664
|
| >d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PRTase-like superfamily: PRTase-like family: Phosphoribosyltransferases (PRTases) domain: Adenine PRTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.66 E-value=1.6 Score=28.11 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=28.0
Q ss_pred CCCCCEEEEEc----CChHHHHHHHHHHHCCCeEEEEe
Q 030694 40 DKPGMHVGVVG----LGGLGHVAVKFAKAMGVKVTVIS 73 (173)
Q Consensus 40 ~~~g~~vlI~G----~g~~G~~a~~~~~~~g~~v~~~~ 73 (173)
+.+|++|+|+- .|++-..++++++..|++|+.+.
T Consensus 115 i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~ 152 (178)
T d1zn7a1 115 LEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV 152 (178)
T ss_dssp SCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEE
Confidence 46799999983 48999999999999999876543
|
| >d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded left-handed beta-helix superfamily: Trimeric LpxA-like enzymes family: PglD-like domain: Acetyltransferase PglD species: Campylobacter jejuni [TaxId: 197]
Probab=81.35 E-value=1.8 Score=28.08 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=28.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
.++++|+|+|+-|.....+++..+.++..+..+....
T Consensus 2 ~kkl~i~Gagg~~~~v~di~~~~~~~~~~f~dd~~~~ 38 (193)
T d3bswa1 2 TEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGM 38 (193)
T ss_dssp CSEEEEEC--CHHHHHHHHHHHHTCCEEEECCCCTTG
T ss_pred CCEEEEEcCCHhHHHHHHHHHhCCCcEEEEEcCCCCc
Confidence 5789999999899999999999999877766443333
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=80.64 E-value=2.6 Score=29.05 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=41.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC--CE-EeeCCChHHHHHhcCCccEEEEcCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA--DS-FLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~--~~-v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
.+++-.|+| .|...+.+++...++|++++.+++..+.++++ ++. .. +...+-.+...+..+.+|+++..-+
T Consensus 112 ~~vld~g~G-sG~i~~~la~~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~~~~~~fDlIVsNPP 188 (271)
T d1nv8a_ 112 KTVADIGTG-SGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 188 (271)
T ss_dssp CEEEEESCT-TSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred cEEEEeeee-eehhhhhhhhcccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccccccCcccEEEEccc
Confidence 456656543 22223334556778999999999988888774 342 11 2222222333333457899987644
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=80.61 E-value=5.1 Score=25.51 Aligned_cols=74 Identities=11% Similarity=0.017 Sum_probs=41.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHC---CC----eEEEEeCCcch--HHHHHHH---cC---CCEEeeCCChHHHHHhc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAM---GV----KVTVISTSPSK--KSEAVER---LG---ADSFLVSRDQDEMQAAM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~---g~----~v~~~~~~~~~--~~~~~~~---~g---~~~v~~~~~~~~~~~~~ 104 (173)
++.-+|.|+|| |.+|..++..+... |. .+...+.++.+ ++-..-. .. ...++...+ ..+..
T Consensus 22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~---~~~~~ 98 (175)
T d7mdha1 22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGID---PYEVF 98 (175)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESC---HHHHT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccccc---chhhc
Confidence 44568999998 99998888766542 32 34444544332 2222111 11 112222222 12335
Q ss_pred CCccEEEEcCCCc
Q 030694 105 GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ~~~d~vid~~g~~ 117 (173)
.+.|+++-+.|.+
T Consensus 99 ~~aDvVvi~ag~~ 111 (175)
T d7mdha1 99 EDVDWALLIGAKP 111 (175)
T ss_dssp TTCSEEEECCCCC
T ss_pred cCCceEEEeeccC
Confidence 6899999998876
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.46 E-value=4.6 Score=24.95 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=38.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC-------eEEEEeCCcc--hHHHHHH---HcCC---CEEeeCCChHHHHHhcCCc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV-------KVTVISTSPS--KKSEAVE---RLGA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~-------~v~~~~~~~~--~~~~~~~---~~g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
-+|.|+|| |.+|..++..+...+. .+...+.++. +.+.+.- .... ..+.-.. ...+...+.
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 80 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATD---KEEIAFKDL 80 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEES---CHHHHTTTC
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCc---ccccccCCc
Confidence 47999997 9999887776653321 3455554432 2222211 1111 1111111 122345689
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+++-+.|.+
T Consensus 81 dvVVitag~~ 90 (154)
T d5mdha1 81 DVAILVGSMP 90 (154)
T ss_dssp SEEEECCSCC
T ss_pred eEEEEecccC
Confidence 9999999875
|