Citrus Sinensis ID: 030916

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEccccccEEEEEEEEEccccccccHHHHHHHcccccccEEEEEEccEEccccccccccEEEcccHHHHHHHHHcccccccccEEEEEEcccccEEccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEEEEcccccEEEEEEEEEccccccccccEEEEEcccccccEEEEEEccccccccccccccEEHEccHHHHHHHHHccccccEEEEEEEEEccccEEEccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mvqctshmcpirvhwhVKLNYKEYWRVKITITNFNYAMNYSLWNLVvqhpnfdnlTQLFSFYYksltpyeglndTAMLWGIKFYNDFLseagsngnvqsellfrkdastftfekgwafprriyfngdncvmpppdaypwlpnassrpvISLLRSAIIILASWVLLLAYV
Flexible Loop (DISEMBL)
mvqctshmcpirvhwHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV
Low Complexity Region (SEG)
MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVisllrsaiiilasWVLLLAYV
Disordered region (IsUnstruct)
***CTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAY*
Disordered Region (DISOPRED)
*VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAG*****Q***LFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAY*************LLRSAIIILASWVLLLAYV
Disordered Region (DISEMBL)
MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV
Disordered Region (DISPRO)
MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
Q94KT8	456	Protein COBRA OS=Arabidop	yes	no	0.899	0.333	0.822	9e-75
Q6Z4G8	446	COBRA-like protein 1 OS=O	yes	no	1.0	0.378	0.745	4e-74
Q9SRT7	452	COBRA-like protein 1 OS=A	no	no	0.940	0.351	0.754	3e-72
Q8L8Q7	441	COBRA-like protein 2 OS=A	no	no	0.982	0.376	0.740	2e-70
Q60E70	457	COBRA-like protein 3 OS=O	no	no	1.0	0.369	0.717	3e-70
Q75IW1	458	COBRA-like protein 2 OS=O	no	no	0.857	0.316	0.758	1e-65
Q6Z4G7	451	COBRA-like protein 6 OS=O	no	no	0.988	0.370	0.634	2e-63
Q10JL1	468	COBRA-like protein 5 OS=O	no	no	0.970	0.350	0.664	6e-63
A2XHZ9	468	COBRA-like protein 5 OS=O	N/A	no	0.970	0.350	0.664	6e-63
Q9LFW3	431	COBRA-like protein 4 OS=A	no	no	0.940	0.368	0.616	2e-61

>sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1

 Score =  278 bits (712), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 125/152 (82%), Positives = 135/152 (88%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCPIRVHWHVK NYKEYWRVKITITNFNY +NY+ WNLV QHPN DN+TQ+FS
Sbjct: 290 LVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFS 349

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY GLNDTAMLWG+KFYNDFLSEAG  GNVQSE+LFRKD STFTFEKGWAFPR
Sbjct: 350 FNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPR 409

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLL 152
           RIYFNGDNCVMPPPD+YP+LPN  SR   S +
Sbjct: 410 RIYFNGDNCVMPPPDSYPFLPNGGSRSQFSFV 441

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z4G8|COBL1_ORYSJ COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1

 Score =  276 bits (707), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 126/169 (74%), Positives = 142/169 (84%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVK+NYKEYWRVKIT+TNFNY MNYS WNLV QHP+FDNLT +FS
Sbjct: 278 LVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFS 337

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSL PY  +NDTAMLWGIK+YND L  AG +GNVQSELLF+KD  +FTFEKGWAFPR
Sbjct: 338 FNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPR 397

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
           R+YFNGDNCVMPPPDAYPWLPNAS+R + S+L   I I  +   L+ Y 
Sbjct: 398 RVYFNGDNCVMPPPDAYPWLPNASTRVMSSILLPFITIWTALTFLMVYA 446

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SRT7|COBL1_ARATH COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1

 Score =  270 bits (690), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 120/159 (75%), Positives = 136/159 (85%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ FS
Sbjct: 285 LVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFS 344

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK LTPY  +NDT +LWGIKFYND L +AG  GNVQSELLF+K+AS FTFEKGWAFPR
Sbjct: 345 FNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPR 404

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIIL 159
           RIYFNGDNCVMPPPD+YPWLPN  S   +  L +A+ +L
Sbjct: 405 RIYFNGDNCVMPPPDSYPWLPNTGSHKSVGSLFAAMALL 443

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8Q7|COBL2_ARATH COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2

 Score =  264 bits (675), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 123/166 (74%), Positives = 137/166 (82%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           ++QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDNLT+LFS
Sbjct: 276 LLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFS 335

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK L PY  +NDTAMLWGIKFYNDFLS+AG  GNVQSELLF+K+   FTFEKGWAFPR
Sbjct: 336 FNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPR 395

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLL 166
           RIYFNGDNCVMPPPD+YPWLPNAS     S     +I   S ++L+
Sbjct: 396 RIYFNGDNCVMPPPDSYPWLPNASPNIATSPFVILLITFLSVLILM 441

Arabidopsis thaliana (taxid: 3702)

>sp|Q60E70|COBL3_ORYSJ COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1

 Score =  263 bits (673), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 122/170 (71%), Positives = 135/170 (79%), Gaps = 1/170 (0%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIR+HWHVKLNYKEYWRVKITITNFNY MNY+ WNLV QHPNF+N+TQLFS
Sbjct: 288 LVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFNNITQLFS 347

Query: 61  FYYKSLTPY-EGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFP 119
           F YK LTPY   +NDTAM WG+KFYND L +AG  GN QSELL RKD+  FTF+KGWAFP
Sbjct: 348 FNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSKDFTFDKGWAFP 407

Query: 120 RRIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
            R+YFNGDNCVMPPPDAYPWLPNAS      L  S ++       LLAY 
Sbjct: 408 HRVYFNGDNCVMPPPDAYPWLPNASPLTKQPLTLSVLVFSIVLATLLAYA 457

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q75IW1|COBL2_ORYSJ COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1

 Score =  248 bits (634), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 129/145 (88%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCPIRVHWHVKLNY++YWRVK+TITN+NY MNYS WNLVVQHPNF+N++ +FS
Sbjct: 280 LVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFS 339

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSL PY  +NDTAM+WG+K+YND L  AG +GNVQSELLFRKD STFTF+KGWAFPR
Sbjct: 340 FNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPR 399

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASS 145
           RIYFNG++CVMP PD YPWLP +S+
Sbjct: 400 RIYFNGESCVMPSPDLYPWLPPSST 424

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6Z4G7|COBL6_ORYSJ COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1

 Score =  241 bits (614), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 106/167 (63%), Positives = 133/167 (79%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           ++QCT+HMCP+RVHWHVKLNY+EYWR KITI NFNY MNY+ W LV QHPN DN+T++FS
Sbjct: 285 LLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEVFS 344

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK +  Y  +NDTAM +G+K++ND L EAG +GNVQSE+L RKDA TFTF +GWAFPR
Sbjct: 345 FDYKPVVSYGSINDTAMFYGLKYFNDQLMEAGPHGNVQSEVLMRKDARTFTFRQGWAFPR 404

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLA 167
           ++YFNGD C MPPPD+YP+LPNA+     SL+ SA+ + A    L+A
Sbjct: 405 KVYFNGDECQMPPPDSYPYLPNAAPPAAASLVGSAVAMAALVFFLMA 451

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1

 Score =  239 bits (610), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/167 (66%), Positives = 132/167 (79%), Gaps = 3/167 (1%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           ++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FS
Sbjct: 302 LLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFS 361

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK L PY  +NDT M +G+KFYND L EAG  GNVQSE+L RKD +TFTF +GWAFPR
Sbjct: 362 FQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPR 421

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASS-RPVISLLRSAIIILASWVLLL 166
           +IYFNGD C MPPPD+YP+LPN++   P  S+  +A  IL   VLLL
Sbjct: 422 KIYFNGDECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILV--VLLL 466

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XHZ9|COBL5_ORYSI COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1

 Score =  239 bits (610), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/167 (66%), Positives = 132/167 (79%), Gaps = 3/167 (1%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           ++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FS
Sbjct: 302 LLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFS 361

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK L PY  +NDT M +G+KFYND L EAG  GNVQSE+L RKD +TFTF +GWAFPR
Sbjct: 362 FQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPR 421

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASS-RPVISLLRSAIIILASWVLLL 166
           +IYFNGD C MPPPD+YP+LPN++   P  S+  +A  IL   VLLL
Sbjct: 422 KIYFNGDECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILV--VLLL 466

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9LFW3|COBL4_ARATH COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2

 Score =  234 bits (596), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 129/159 (81%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           ++QCT HMCP+RVHWHVK NYK+YWRVKI ITNFNY MN++LW L +QHPN +N+TQ+FS
Sbjct: 268 LLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFS 327

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YK ++PY  +NDT M +G KFYND L EAG +GNVQSE+L +KD  TFTF++GWAFPR
Sbjct: 328 FDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPR 387

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIIL 159
           ++YFNGD C++PPPD+YP+LPN++     S   + +++L
Sbjct: 388 KVYFNGDECMLPPPDSYPFLPNSAQGNFASFSLTILLLL 426

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
224124236	457	predicted protein [Populus trichocarpa]	1.0	0.369	0.840	7e-83
356508483	456	PREDICTED: protein COBRA-like [Glycine m	0.982	0.364	0.849	2e-81
225456559	456	PREDICTED: protein COBRA [Vitis vinifera	1.0	0.370	0.828	2e-81
356516873	456	PREDICTED: protein COBRA-like [Glycine m	0.982	0.364	0.843	3e-80
38194916	448	phytochelatin synthetase-like protein [P	0.970	0.366	0.804	3e-77
449440891	455	PREDICTED: protein COBRA-like [Cucumis s	0.982	0.364	0.792	2e-76
356568809	448	PREDICTED: protein COBRA-like [Glycine m	0.982	0.370	0.769	2e-76
147780878	469	hypothetical protein VITISV_020126 [Viti	0.988	0.356	0.797	3e-76
255640995	229	unknown [Glycine max]	0.887	0.655	0.873	2e-75
388515389	448	unknown [Lotus japonicus]	0.988	0.372	0.778	2e-75

>gi|224124236|ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|118482010|gb|ABK92936.1| unknown [Populus trichocarpa] gi|222871273|gb|EEF08404.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (796), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 142/169 (84%), Positives = 153/169 (90%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYKEYWRVK+T+TNFNY MNYSLWN+VVQHPNFDNLT++FS
Sbjct: 289 LVQCTSHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSLWNMVVQHPNFDNLTKIFS 348

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPYEGLNDTAMLWG+KFYNDFLS+AG  GNVQSELLFRKD STFTFEKGWAFPR
Sbjct: 349 FQYKSLTPYEGLNDTAMLWGVKFYNDFLSQAGPLGNVQSELLFRKDKSTFTFEKGWAFPR 408

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
           RIYFNGDNCVMPPPDAYPWLPN SSRPVISLL   + +  S   L A+V
Sbjct: 409 RIYFNGDNCVMPPPDAYPWLPNDSSRPVISLLLPVMTLFLSMAFLFAHV 457

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508483|ref|XP_003522986.1| PREDICTED: protein COBRA-like [Glycine max]

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 141/166 (84%), Positives = 152/166 (91%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNY MNYS WNLVVQHPN DN+TQLFS
Sbjct: 288 LVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFS 347

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPYEGLNDT+MLWG+KFYNDFLS AGS GNVQSE+L RKD STFTF+KGWAFPR
Sbjct: 348 FNYKSLTPYEGLNDTSMLWGVKFYNDFLSSAGSLGNVQSEILLRKDKSTFTFDKGWAFPR 407

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLL 166
           RIYFNGDNCVMPPPDAYPWLPNASS+ V SLL + I+ LAS ++LL
Sbjct: 408 RIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIVTLASLLILL 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456559|ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi|297734083|emb|CBI15330.3| unnamed protein product [Vitis vinifera]

 Score =  306 bits (783), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/169 (82%), Positives = 153/169 (90%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYK+YWRVKITITNFNY MNY+ WNLVVQHPNFDNLTQ+FS
Sbjct: 288 LVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY  +NDTAMLWG+KFYND LS+AG  GNVQSELLFRKD +TFTF+KGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPR 407

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
           RIYFNGDNCVMPPPDAYPWLPNASSRP +SLL S + ILA  V++LAY 
Sbjct: 408 RIYFNGDNCVMPPPDAYPWLPNASSRPTVSLLYSILTILAVSVIVLAYA 456

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516873|ref|XP_003527117.1| PREDICTED: protein COBRA-like [Glycine max]

 Score =  302 bits (773), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 140/166 (84%), Positives = 150/166 (90%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNY MNYS WNLVVQHPN DN+TQLFS
Sbjct: 288 LVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFS 347

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSL PYEGLNDT+MLWG+KFYNDFLS AGS GNVQSE+L RKD STFTF+KGWAFPR
Sbjct: 348 FNYKSLNPYEGLNDTSMLWGVKFYNDFLSSAGSLGNVQSEILLRKDKSTFTFDKGWAFPR 407

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLL 166
           RIYFNGDNCVMPPPDAYPWLPNASS+ V SLL + I  LAS ++LL
Sbjct: 408 RIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLILL 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38194916|gb|AAR13304.1| phytochelatin synthetase-like protein [Phaseolus vulgaris]

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 145/164 (88%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCP+R+HWHVK+NYKEYWRVK+TITNFNY MNYS WN+VVQHPNFDNLTQLFS
Sbjct: 281 LVQCTSHMCPVRIHWHVKVNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFS 340

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY  +NDTAMLWG+KFYNDFLS+AG NGNVQSELLFRKD +TFTF+KGWAFPR
Sbjct: 341 FNYKSLTPYGSINDTAMLWGVKFYNDFLSQAGPNGNVQSELLFRKDKATFTFDKGWAFPR 400

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVL 164
           RIYFNGDNCVMPPPDAYPWLPNA SR  +SL    I  L + V 
Sbjct: 401 RIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVIAYLVALVF 444

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440891|ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativus] gi|449529459|ref|XP_004171717.1| PREDICTED: protein COBRA-like [Cucumis sativus]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 134/169 (79%), Positives = 151/169 (89%), Gaps = 3/169 (1%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYK+YWRVKITITNFNY MNY+LWNLVVQHPNFDN+T+LFS
Sbjct: 289 LVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLFS 348

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSL+PY  LNDTAMLWG+KFYND L++AG  GNVQSELLF+KD +TFTF+KGWAFPR
Sbjct: 349 FNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPR 408

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
           R+YFNGDNCVMPPP+AYP+LPNASSRP ISLL   + IL S  LLL + 
Sbjct: 409 RVYFNGDNCVMPPPEAYPYLPNASSRPAISLL---VTILISLALLLNFA 454

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568809|ref|XP_003552600.1| PREDICTED: protein COBRA-like [Glycine max]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 130/169 (76%), Positives = 149/169 (88%), Gaps = 3/169 (1%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCP+R+HWHVKLNYKEYWRVK+TITNFNY MNYS WN+VVQHPNFDNLTQLFS
Sbjct: 281 LVQCTRHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFS 340

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY  +NDTAMLWG+KFYNDFL++AG NGNVQSELLFRKD +TFTF+KGWAFPR
Sbjct: 341 FNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPR 400

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAYV 169
           R+YFNGDNCVMPPPD+YPWLPNA +R  +SL     +++AS V L+ Y 
Sbjct: 401 RVYFNGDNCVMPPPDSYPWLPNAGARQEVSLFS---LVIASLVALVFYA 446

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147780878|emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 134/168 (79%), Positives = 149/168 (88%), Gaps = 1/168 (0%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCPIRVHWHVKL+YKEYWRVK+TITNFNY MNY+ WNLVVQHPNFDNLTQ+FS
Sbjct: 288 LVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY  +NDTAMLWG+KFYND L +AG  GNVQSELLFRKD STFTFEKGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPR 407

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLAY 168
           RIYFNGDNCVMPPPD+YPWLPNA+SR   SLL + I++L S +LL A+
Sbjct: 408 RIYFNGDNCVMPPPDSYPWLPNATSRTSTSLL-TLIMVLLSALLLYAH 454

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640995|gb|ACU20777.1| unknown [Glycine max]

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/150 (87%), Positives = 139/150 (92%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNY MNYS WNLVVQHPN DN+TQLFS
Sbjct: 75  LVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFS 134

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSL PYEGLNDT+MLWG+KFYNDFLS AGS GNVQSE+L RKD STFTF++GWAFPR
Sbjct: 135 FNYKSLNPYEGLNDTSMLWGVKFYNDFLSSAGSLGNVQSEILLRKDKSTFTFDRGWAFPR 194

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVIS 150
           RIYFNGDNCVMPPPDAYPWLPNASS+ V S
Sbjct: 195 RIYFNGDNCVMPPPDAYPWLPNASSKLVFS 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515389|gb|AFK45756.1| unknown [Lotus japonicus]

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 143/167 (85%)

Query: 1   MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
           +VQCT HMCP+R+HW VKLNYKEYWRVK+TITNFNY MNYS WNLV QHPNFDNLTQLFS
Sbjct: 280 LVQCTRHMCPVRIHWRVKLNYKEYWRVKVTITNFNYKMNYSEWNLVAQHPNFDNLTQLFS 339

Query: 61  FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
           F YKSLTPY  +NDTA+LWG+KFYNDFL+EAG +GNVQSELLFRKD STFTFE+GWAFPR
Sbjct: 340 FNYKSLTPYGSINDTALLWGVKFYNDFLNEAGPSGNVQSELLFRKDKSTFTFERGWAFPR 399

Query: 121 RIYFNGDNCVMPPPDAYPWLPNASSRPVISLLRSAIIILASWVLLLA 167
           RIYFNGDNCVMP PDAYPWLPNA SR  +SL    +  L + VL  A
Sbjct: 400 RIYFNGDNCVMPSPDAYPWLPNAGSRQEVSLFALVMASLVAVVLCFA 446

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2173532	456	COB "AT5G60920" [Arabidopsis t	0.863	0.320	0.849	3.7e-71
TAIR|locus:2076507	452	COBL1 "COBRA-like protein 1 pr	0.857	0.320	0.806	1e-68
TAIR|locus:2086601	441	COBL2 "AT3G29810" [Arabidopsis	0.852	0.326	0.826	4.4e-68
TAIR|locus:2143151	431	IRX6 "IRREGULAR XYLEM 6" [Arab	0.852	0.334	0.666	9.3e-59
TAIR|locus:2024377	454	COBL6 "AT1G09790" [Arabidopsis	0.852	0.317	0.641	3.8e-53
TAIR|locus:2155889	663	SHV2 "SHAVEN 2" [Arabidopsis t	0.727	0.185	0.262	8.6e-08
TAIR|locus:2085785	672	COBL10 "COBRA-like protein 10	0.686	0.172	0.251	3e-07
TAIR|locus:2130100	661	COBL7 "AT4G16120" [Arabidopsis	0.721	0.184	0.251	3.8e-07
TAIR|locus:2136452	668	COBL11 "COBRA-like protein 11	0.715	0.181	0.253	3.5e-06
TAIR|locus:2093673	653	COBL8 "COBRA-like protein 8 pr	0.721	0.186	0.251	2.3e-05

TAIR|locus:2173532 COB "AT5G60920" [Arabidopsis thaliana (taxid:3702)]

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 124/146 (84%), Positives = 133/146 (91%)

Query:     1 MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
             +VQCT HMCPIRVHWHVK NYKEYWRVKITITNFNY +NY+ WNLV QHPN DN+TQ+FS
Sbjct:   290 LVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFS 349

Query:    61 FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
             F YKSLTPY GLNDTAMLWG+KFYNDFLSEAG  GNVQSE+LFRKD STFTFEKGWAFPR
Sbjct:   350 FNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPR 409

Query:   121 RIYFNGDNCVMPPPDAYPWLPNASSR 146
             RIYFNGDNCVMPPPD+YP+LPN  SR
Sbjct:   410 RIYFNGDNCVMPPPDSYPFLPNGGSR 435

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009825 "multidimensional cell growth" evidence=RCA;IMP

GO:0009897 "external side of plasma membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010215 "cellulose microfibril organization" evidence=IMP

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=RCA;IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009930 "longitudinal side of cell surface" evidence=IDA

TAIR|locus:2076507 COBL1 "COBRA-like protein 1 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 117/145 (80%), Positives = 129/145 (88%)

Query:     1 MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
             +VQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ FS
Sbjct:   285 LVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFS 344

Query:    61 FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
             F YK LTPY  +NDT +LWGIKFYND L +AG  GNVQSELLF+K+AS FTFEKGWAFPR
Sbjct:   345 FNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPR 404

Query:   121 RIYFNGDNCVMPPPDAYPWLPNASS 145
             RIYFNGDNCVMPPPD+YPWLPN  S
Sbjct:   405 RIYFNGDNCVMPPPDSYPWLPNTGS 429

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

TAIR|locus:2086601 COBL2 "AT3G29810" [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 119/144 (82%), Positives = 129/144 (89%)

Query:     1 MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
             ++QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDNLT+LFS
Sbjct:   276 LLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFS 335

Query:    61 FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
             F YK L PY  +NDTAMLWGIKFYNDFLS+AG  GNVQSELLF+K+   FTFEKGWAFPR
Sbjct:   336 FNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPR 395

Query:   121 RIYFNGDNCVMPPPDAYPWLPNAS 144
             RIYFNGDNCVMPPPD+YPWLPNAS
Sbjct:   396 RIYFNGDNCVMPPPDSYPWLPNAS 419

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2143151 IRX6 "IRREGULAR XYLEM 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 96/144 (66%), Positives = 123/144 (85%)

Query:     1 MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
             ++QCT HMCP+RVHWHVK NYK+YWRVKI ITNFNY MN++LW L +QHPN +N+TQ+FS
Sbjct:   268 LLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFS 327

Query:    61 FYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPR 120
             F YK ++PY  +NDT M +G KFYND L EAG +GNVQSE+L +KD  TFTF++GWAFPR
Sbjct:   328 FDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPR 387

Query:   121 RIYFNGDNCVMPPPDAYPWLPNAS 144
             ++YFNGD C++PPPD+YP+LPN++
Sbjct:   388 KVYFNGDECMLPPPDSYPFLPNSA 411

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2024377 COBL6 "AT1G09790" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 93/145 (64%), Positives = 114/145 (78%)

Query:     1 MVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFS 60
             +V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN   NY+ WNLVV HPN  ++ Q+FS
Sbjct:   282 VVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFS 341

Query:    61 FYYKSLTPYEG-LNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFP 119
             F YKSLTPY+  +NDT M WG++FYND L + G  GNVQ+ELL +KD   FTF +GWAFP
Sbjct:   342 FNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFP 401

Query:   120 RRIYFNGDNCVMPPPDAYPWLPNAS 144
             RRI FNGD CVMP PD +P LP ++
Sbjct:   402 RRILFNGDECVMPSPDDFPRLPKSA 426

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2155889 SHV2 "SHAVEN 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 8.6e-08, P = 8.6e-08
 Identities = 36/137 (26%), Positives = 65/137 (47%)

Query:     9 CPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ--HPNFDNLTQLFSFYYKSL 66
             C + ++WH+  +Y+  W V+ITI N+   +++  W L VQ   P      + +SF    L
Sbjct:   496 CGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQMKKPALLGFEKAYSFNASLL 554

Query:    67 TPYEGLNDTAMLWGIKFYNDFLSEAGSN----------GNVQSELLFRKDAST-FTFEKG 115
             +   G+N+T  + G+   +  ++EA             G  QS + F K  +      + 
Sbjct:   555 SVDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNIRIPGKQQSVIQFSKKLTPGINVAER 614

Query:   116 WAFPRRIYFNGDNCVMP 132
               FP ++ FNG+ C++P
Sbjct:   615 DGFPAKVIFNGEECLLP 631

GO:0005886 "plasma membrane" evidence=ISM

GO:0009932 "cell tip growth" evidence=IMP

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048765 "root hair cell differentiation" evidence=RCA;IMP

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2085785 COBL10 "COBRA-like protein 10 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 35/139 (25%), Positives = 67/139 (48%)

Query:     9 CPIRVHWHVKLNYKEYWRVKITITNF-NYAMNYSLWNLVVQH----PNFDNLTQLFSFYY 63
             C + ++WHV  +YK  W  ++T+ N+ ++A  +  W + +      P ++N+   +SF  
Sbjct:   509 CGVSINWHVSTDYKNGWTARLTVFNWRDFA--FEDWFVAIDMGKAGPGYENV---YSFNG 563

Query:    64 KSLTPYEGLNDTAMLWGIKFYNDFLSEA-GSN--------GNVQSELLF-RKDASTFTFE 113
               + P    N T +  G+   N  + +  G+N        G  QS + F +K+       
Sbjct:   564 TRVPPS---NRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGKQQSVISFTKKNIKGLNIP 620

Query:   114 KGWAFPRRIYFNGDNCVMP 132
             +G  FP +++FNG+ C +P
Sbjct:   621 EGDGFPTKLFFNGEECALP 639

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2130100 COBL7 "AT4G16120" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 34/135 (25%), Positives = 62/135 (45%)

Query:     9 CPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNF-DNLTQLFSFYYKSLT 67
             C + ++WH+  +Y+  W  ++T+ N+    ++  W   VQ  N      + +SF   ++ 
Sbjct:   498 CGVSINWHLATDYRGGWTARVTVFNWGET-DFVDWFTAVQMKNAAPGFEKAYSFNASTIG 556

Query:    68 PYEGLNDTAMLWGIKFYNDFLSEA-GSN--------GNVQSELLFRKDAST-FTFEKGWA 117
                G N+T  + G+   N  ++E  G N        G  QS + F K  +       G  
Sbjct:   557 -INGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDG 615

Query:   118 FPRRIYFNGDNCVMP 132
             FP +++FNG+ C +P
Sbjct:   616 FPSKVFFNGEECSLP 630

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISS

TAIR|locus:2136452 COBL11 "COBRA-like protein 11 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 34/134 (25%), Positives = 64/134 (47%)

Query:     9 CPIRVHWHVKLNYKEYWRVKITITNF-NYAMN--YSLWNLVVQHPNFDNLTQLFSFYYKS 65
             C I ++WH+  +Y   W  ++T+ N+ N A+   +   +L      ++N+   +SF    
Sbjct:   499 CGISLNWHLNSDYGNGWSARVTLFNWGNNAVEDWFGALDLGKAGLGYENI---YSFNGSR 555

Query:    66 LTP------YEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRK-DASTFTFEKGWAF 118
             + P      ++GL     L GI    +   +    G +QS + F+K +  +     G  F
Sbjct:   556 VPPKNQTIFFQGLPGMNYLIGITNGTNPARDPQIPGKMQSVISFKKKNLGSLNIIGGDGF 615

Query:   119 PRRIYFNGDNCVMP 132
             P+R++FNG+ C +P
Sbjct:   616 PKRVFFNGEECELP 629

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0006944 "cellular membrane fusion" evidence=RCA

TAIR|locus:2093673 COBL8 "COBRA-like protein 8 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 34/135 (25%), Positives = 59/135 (43%)

Query:     9 CPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNF-DNLTQLFSFYYKSLT 67
             C + ++WH+  +Y+  W  ++T+ N+    ++  W   V+  N      + +SF   S+ 
Sbjct:   490 CGVSINWHLATDYRGGWTARVTLFNWGDT-DFVDWFTAVELRNAAPGFQKAYSFN-GSII 547

Query:    68 PYEGLNDTAMLWGIKFYNDFLSEA-GSN--------GNVQSELLFRKDAST-FTFEKGWA 117
                G N T ++ G+   N  L+E  G N        G  QS + F K  +          
Sbjct:   548 AVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKLTPGIKVGSKDG 607

Query:   118 FPRRIYFNGDNCVMP 132
             FP ++ FNG  C +P
Sbjct:   608 FPTKVLFNGQECSLP 622


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.474    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       156   0.00073  106 3  11 22  0.45    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  185 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.42u 0.12s 15.54t   Elapsed:  00:00:00
  Total cpu time:  15.43u 0.12s 15.55t   Elapsed:  00:00:00
  Start:  Fri May 10 03:38:42 2013   End:  Fri May 10 03:38:42 2013

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6Z4G8	COBL1_ORYSJ	No assigned EC number	0.7455	1.0	0.3789	yes	no
Q94KT8	COBRA_ARATH	No assigned EC number	0.8223	0.8994	0.3333	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_1290056 SubName- Full=Putative uncharacterized protein; (457 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
PF00553	101	CBM_2: Cellulose binding domain; InterPro: IPR0019	92.99

>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3

Probab=92.99  E-value=0.72  Score=33.81  Aligned_cols=99  Identities=17%  Similarity=0.253  Sum_probs=61.4

Q ss_pred             EEEEEeeCCCCceEEEEEEEecCCCcCCcceeEEeecCCCCCcceEEEecceecCCCCCCCcceEEEcccchhHHhhhcC
Q 030916           13 VHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAG   92 (169)
Q Consensus        13 InWHV~~nYk~~W~vkiTi~N~~~~~ny~dW~lvvq~pn~~~~~~vySFN~t~l~~y~~~N~T~m~~Gl~~~N~ll~~~g   92 (169)
                      +-.-|..+.-+|+.++|||+|=. .....+|.+-++.|.-.-+++++  |++.-    ...+++.+-+. .+|--|.   
T Consensus         3 v~~~v~~~W~~Gf~~~v~v~N~~-~~~i~~W~v~~~~~~~~~i~~~W--na~~s----~~g~~~~v~~~-~wn~~i~---   71 (101)
T PF00553_consen    3 VTYTVTNSWGGGFQGEVTVTNNG-SSPINGWTVTFTFPSGQTITSSW--NATVS----QSGNTVTVTNP-SWNGTIA---   71 (101)
T ss_dssp             EEEEEEEESSSEEEEEEEEEESS-SSTEESEEEEEEESTTEEEEEEE--SCEEE----EETTEEEEEES-STCSEEE---
T ss_pred             EEEEEecccCCCeEEEEEEEECC-CCccCCEEEEEEeCCCCEEeeee--ccEEE----ecCCEEEEEcC-CcCcccC---
Confidence            45667888999999999999966 36777999999998644444544  44421    12245555554 3443222   


Q ss_pred             CCCceeEEEEEEecCCCccccccccCceeeEeeCCcc
Q 030916           93 SNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNC  129 (169)
Q Consensus        93 ~~GkvQSeilf~K~~~~~~~~~G~~FP~rVyFNGeeC  129 (169)
                       +|.. ..+-|.=..     ....+-|..+-+||..|
T Consensus        72 -~G~s-~~~Gf~~~~-----~~~~~~p~~~t~ng~~C  101 (101)
T PF00553_consen   72 -PGGS-VTFGFQASG-----SGSSAAPSTCTVNGAPC  101 (101)
T ss_dssp             -ESEE-EEEEEEEEE-----SSS--SESEEEETTEEE
T ss_pred             -CCCe-EEEEEEEeC-----CCCCCCCcEEEEcCeeC
Confidence             2322 234444332     12234599999999999

2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1v6ga2	40	Actin-binding LIM protein 2, abLIM2 {Human (Homo s	85.82
d1exha_	110	Exo-1,4-beta-D-glycanase (cellulase, xylanase), ce	84.04

>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: LIM domain
domain: Actin-binding LIM protein 2, abLIM2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.82  E-value=0.11  Score=31.87  Aligned_cols=14  Identities=43%  Similarity=1.035  Sum_probs=11.6

Q ss_pred             eeeEeeCCcc-----CCCC
Q 030916          120 RRIYFNGDNC-----VMPP  133 (169)
Q Consensus       120 ~rVyFNGeeC-----~mP~  133 (169)
                      .||-|||.||     ++|.
T Consensus        14 DRVTFnGKeC~CQ~Cs~p~   32 (40)
T d1v6ga2          14 DRVTFNGKECMCQKCSLPV   32 (40)
T ss_dssp             SCEEEETTEEEEHHHHSCC
T ss_pred             CeEEEcCceeehhhcCCCc
Confidence            6999999987     6765

>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: Carbohydrate-binding domain
family: Cellulose-binding domain family II
domain: Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD
species: Cellulomonas fimi [TaxId: 1708]

Probab=84.04  E-value=2.5  Score=29.34  Aligned_cols=103  Identities=17%  Similarity=0.298  Sum_probs=63.7

Q ss_pred             CCceeEEEEEeeCCCCceEEEEEEEecCCCcCCcceeEEeecCCCCCcceEEEecceecCCCCCCCcceEEEcccchhHH
Q 030916            8 MCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDF   87 (169)
Q Consensus         8 mCpV~InWHV~~nYk~~W~vkiTi~N~~~~~ny~dW~lvvq~pn~~~~~~vySFN~t~l~~y~~~N~T~m~~Gl~~~N~l   87 (169)
                      -|-|++-  + .++-.|..+.|||+|=. .....+|.+.+..|.-.-+++.+  |++ +..   ..++..+-. ..||.-
T Consensus         7 ~c~v~y~--~-n~W~~Gf~~~vtVtN~~-~~~~~gW~v~~~~p~g~~i~~~W--na~-~~~---~G~~vtv~~-~~wN~~   75 (110)
T d1exha_           7 GCQVLWG--V-NQWNTGFTANVTVKNTS-SAPVDGWTLTFSFPSGQQVTQAW--SST-VTQ---SGSAVTVRN-APWNGS   75 (110)
T ss_dssp             CEEEECC--E-EECSSCEEEEEEEEECS-SSCEESEEEEEECSSCCEEEEEE--SSE-EEE---ETTEEEEEE-CSSTTE
T ss_pred             ceEEEEE--E-ccCCCCcEEEEEEEeCC-CCcccCcEEEEECCCCCEEeeee--ceE-EEe---cCCEEEEeC-CcccCc
Confidence            4667663  5 57899999999999977 47788999999999744455544  444 221   224555544 334433


Q ss_pred             hhhcCCCCceeEEEEEEecCCCccccccccCceeeEeeCCccCC
Q 030916           88 LSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVM  131 (169)
Q Consensus        88 l~~~g~~GkvQSeilf~K~~~~~~~~~G~~FP~rVyFNGeeC~m  131 (169)
                      |.    +|.- .++-|.-..     ....+=|....+||..|..
T Consensus        76 i~----~G~s-~~fGF~~~~-----~g~~~~P~~~~lNG~~C~~  109 (110)
T d1exha_          76 IP----AGGT-AQFGFNGSH-----TGTNAAPTAFSLNGTPCTV  109 (110)
T ss_dssp             EC----SSEE-CCEEEEEEC-----CSSCCSCSEEEETTEEEEE
T ss_pred             cC----CCCE-EEEEEEeeC-----CCCCCCCcEEEEcCcccCC
Confidence            32    2221 234454321     1223459999999999963