Citrus Sinensis ID: 030941

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Secondary Structure (PSIPRED)
cEEEEcccccccccccccccEEEcccEEEEEEEEEEEEcccEEEccccccccccccccccccccEEEEEEEEcccEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccEEEEEEcccccccEEEEEEcccccEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEccccccHHHcccccEEccccEEEEEEcEEEEEccccEEEccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEEcccccccEEEEEccccEEccc
Coil and Loop (DISEMBL)
mlvyqdlltgdellsdsfpykeiengilwevegkWVVQGAvdvdiganpsaegadedegvddqavKVVDIVDTfrlqeqpafdkKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQffvgesmhddgCLVFAYYkegatdptFLYIADALKEVKC
Flexible Loop (DISEMBL)
mlvyqdlltgdellsdsfpYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddQAVKVVDIVDTfrlqeqpafdkkqfVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Low Complexity Region (SEG)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddqavKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered region (IsUnstruct)
**VYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGA***************QAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL*****
Disordered Region (DISOPRED)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGA****************AVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLL*************KNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISEMBL)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANP**********VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISPRO)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANP************DQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q9ZSW9	168	Translationally-controlle	N/A	no	1.0	1.0	0.946	1e-87
Q5J907	168	Translationally-controlle	N/A	no	1.0	1.0	0.886	3e-84
Q2PS27	168	Translationally-controlle	N/A	no	1.0	1.0	0.857	3e-81
Q6DUX3	168	Translationally-controlle	N/A	no	1.0	1.0	0.851	4e-80
Q944T2	168	Translationally-controlle	no	no	1.0	1.0	0.863	1e-79
P43349	168	Translationally-controlle	N/A	no	1.0	1.0	0.845	2e-79
O03992	170	Translationally-controlle	N/A	no	1.0	0.988	0.852	4e-78
Q9XHL7	168	Translationally-controlle	N/A	no	1.0	1.0	0.815	3e-77
Q9M5G3	168	Translationally-controlle	N/A	no	1.0	1.0	0.809	2e-76
P50906	167	Translationally-controlle	N/A	no	0.994	1.0	0.827	2e-76

>sp|Q9ZSW9|TCTP_HEVBR Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1

 Score =  321 bits (822), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 159/168 (94%), Positives = 161/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.
Hevea brasiliensis (taxid: 3981)

>sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1

 Score =  310 bits (794), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 149/168 (88%), Positives = 160/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Elaeis guineensis var. tenera (taxid: 51953)

>sp|Q2PS27|TCTP_CUCMA Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1

 Score =  300 bits (767), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 144/168 (85%), Positives = 155/168 (92%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Cucurbita maxima (taxid: 3661)

>sp|Q6DUX3|TCTP_SOLLC Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1

 Score =  296 bits (758), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 143/168 (85%), Positives = 153/168 (91%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAV+VVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E QE FKKNIE ATKF
Sbjct: 61  DDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLYIA  LKE+KC
Sbjct: 121 LLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum lycopersicum (taxid: 4081)

>sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1

 Score =  294 bits (753), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 145/168 (86%), Positives = 154/168 (91%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DD AVKVVDIVDTFRLQEQPAFDKKQFVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+
Sbjct: 61  DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSK+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A ALKEVKC
Sbjct: 121 LLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Glycine max (taxid: 3847)

>sp|P43349|TCTP_SOLTU Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2

 Score =  294 bits (752), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/168 (84%), Positives = 152/168 (90%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTY+KR+IK LTPKL  E QE FKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum tuberosum (taxid: 4113)

>sp|O03992|TCTP_FRAAN Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1

 Score =  289 bits (740), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/170 (85%), Positives = 154/170 (90%), Gaps = 2/170 (1%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADED--E 58
           MLVYQDLL+GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPSAEGAD D  E
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADE 60

Query: 59  GVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT 118
           GVDDQ VKVVDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGAT
Sbjct: 61  GVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGAT 120

Query: 119 KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           KFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct: 121 KFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170

Involved in calcium binding and microtubule stabilization.

Fragaria ananassa (taxid: 3747)

>sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1

 Score =  287 bits (734), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 137/168 (81%), Positives = 154/168 (91%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLL+GDEL SDSF Y E+ NG+LWEV+GKWVVQGAVDV+IGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQA+KVVDIVDTFRLQEQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+
Sbjct: 61  DDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKY 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Nicotiana tabacum (taxid: 4097)

>sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2

 Score =  284 bits (726), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/168 (80%), Positives = 149/168 (88%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Hordeum vulgare (taxid: 4513)

>sp|P50906|TCTP_PEA Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2

 Score =  284 bits (726), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 139/168 (82%), Positives = 153/168 (91%), Gaps = 1/168 (0%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDS+PYKEIENG+LWEVEGKWVV+GAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGG-EDEGV 59

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DD AVKVVDIVD FRLQEQP FDKKQF+ ++K++IKLLTPKL  E+QE FKKNIEGATK+
Sbjct: 60  DDTAVKVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKY 119

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LL KL DLQFFVGESMHDDG LVFAYYK+GA DPTFLY + ALKE+KC
Sbjct: 120 LLGKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167

Involved in calcium binding and microtubule stabilization.

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
334854632	168	translationally controlled tumor protein	1.0	1.0	0.952	9e-87
9979196	168	RecName: Full=Translationally-controlled	1.0	1.0	0.946	7e-86
84314025	168	translationally controlled tumor protein	1.0	1.0	0.940	3e-85
386278572	168	translationally controlled tumor protein	1.0	1.0	0.928	7e-85
349891716	168	translationally controlled tumor protein	1.0	1.0	0.910	9e-84
115187479	168	translationally controlled tumor-like pr	1.0	1.0	0.898	8e-83
192912974	168	translationally controlled tumor protein	1.0	1.0	0.892	9e-83
75222628	168	RecName: Full=Translationally-controlled	1.0	1.0	0.886	1e-82
255551769	168	Translationally-controlled tumor protein	1.0	1.0	0.886	1e-81
192910898	168	translationally controlled tumor protein	1.0	1.0	0.880	1e-81

>gi|334854632|gb|AEH05972.1| translationally controlled tumor protein [Hevea brasiliensis] gi|392514569|gb|AFM77714.1| TCTP.1 [Hevea brasiliensis]

 Score =  324 bits (830), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 160/168 (95%), Positives = 162/168 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYY+EGATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9979196|sp|Q9ZSW9.1|TCTP_HEVBR RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|4193388|gb|AAD10032.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  321 bits (822), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 159/168 (94%), Positives = 161/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84314025|gb|ABC55649.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 158/168 (94%), Positives = 160/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEV GKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVVGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTP L EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPMLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYY+EGATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|386278572|gb|AFJ04518.1| translationally controlled tumor protein [Vernicia fordii]

 Score =  318 bits (814), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 156/168 (92%), Positives = 161/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLL+GDELLSDSFPYKEI NG+LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIHNGMLWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT KL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTAKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDD CLVFA+YK+GATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDACLVFAFYKDGATDPTFLYFAYALKEVKC 168

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349891716|gb|AEQ20639.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  314 bits (804), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 153/168 (91%), Positives = 161/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENG+LWEVEGKWVVQGA+DVDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTPKLEPEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKL DLQFFVGESMHDDG LVFAYYKEGATDPTFLY+A  LKEVKC
Sbjct: 121 LLSKLIDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYLAYGLKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115187479|gb|ABI84255.1| translationally controlled tumor-like protein [Arachis hypogaea]

 Score =  311 bits (796), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 151/168 (89%), Positives = 158/168 (94%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV+QGA++VDIGANPSAEG +EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVIQGAINVDIGANPSAEGGEEDESV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLT KL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTAKLEPEQQEHFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYYKEGATDPTFLY A  LKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192912974|gb|ACF06595.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  310 bits (795), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 150/168 (89%), Positives = 160/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75222628|sp|Q5J907.1|TCTP_ELAGV RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|36963062|gb|AAQ87663.1| translationally controlled tumor protein [Elaeis guineensis] gi|306450591|gb|ADM88549.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/168 (88%), Positives = 160/168 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551769|ref|XP_002516930.1| Translationally-controlled tumor protein, putative [Ricinus communis] gi|223544018|gb|EEF45544.1| Translationally-controlled tumor protein, putative [Ricinus communis]

 Score =  306 bits (785), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/168 (88%), Positives = 157/168 (93%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGA+DVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAIDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFVT++KR+IKL+TPKL +E QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFIKRYIKLVTPKLDQETQEHFKKNIEGATKF 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG LVFAYYK+GA DPTFLY A  LKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAHGLKEIKC 168

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910898|gb|ACF06557.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  306 bits (785), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 148/168 (88%), Positives = 159/168 (94%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENG+LWEVEGKWVVQGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQ  KVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATK+
Sbjct: 61  DDQTQKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKQLTPKLDAEKQELFKKHIEGATKY 120

Query: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
           LLSKLSDLQFFVGESMHDDG +VFAYYKEGATDPTFLY+A  LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSMVFAYYKEGATDPTFLYLAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2089378	168	TCTP "translationally controll	1.0	1.0	0.755	8.5e-65
TAIR|locus:2078052	168	AT3G05540 [Arabidopsis thalian	0.994	0.994	0.721	7.9e-62
DICTYBASE|DDB_G0282853	174	DDB_G0282853 "TCTP family prot	0.988	0.954	0.367	1.6e-24
POMBASE|SPAC1F12.02c	168	SPAC1F12.02c "translationally	0.964	0.964	0.360	3.8e-23
UNIPROTKB|Q6XIN1	172	Tctp "Translationally-controll	0.982	0.959	0.342	4.3e-22
FB|FBgn0037874	172	Tctp "Translationally controll	0.982	0.959	0.342	7e-22
MGI|MGI:104890	172	Tpt1 "tumor protein, translati	0.988	0.965	0.356	7e-22
RGD|621623	172	Tpt1 "tumor protein, translati	0.988	0.965	0.356	7e-22
SGD|S000001539	167	TMA19 "Protein that associates	0.892	0.898	0.363	3e-21
UNIPROTKB|E2RMA1	172	TPT1 "Uncharacterized protein"	0.988	0.965	0.344	4.9e-21

TAIR|locus:2089378 TCTP "translationally controlled tumor protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 127/168 (75%), Positives = 137/168 (81%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS          
Sbjct:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
                  KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKF
Sbjct:    61 DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query:   121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
             LL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:   121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0009860 "pollen tube growth" evidence=IMP

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048527 "lateral root development" evidence=IMP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0090406 "pollen tube" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007067 "mitosis" evidence=RCA

GO:0009734 "auxin mediated signaling pathway" evidence=RCA

GO:0008017 "microtubule binding" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0031117 "positive regulation of microtubule depolymerization" evidence=IMP

GO:0090333 "regulation of stomatal closure" evidence=IMP

TAIR|locus:2078052 AT3G05540 [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 122/169 (72%), Positives = 139/169 (82%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             MLVYQD+LTGDELLSDSFPYKEIENG+LWEVEGKWVV+GA+D DIGANP           
Sbjct:     1 MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGGEDEGVD 60

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
                  KVVDI+DTFRLQEQP+FDKKQFV +MKR+IK L+PKL  E QE+FKK+IE ATKF
Sbjct:    61 DQAV-KVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 119

Query:   121 LLSKLSDLQFFVGESMH-DDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
             L+SKL D QFFVGESM  ++G LVFAYY+EGATDPTFLY+A  LKE+KC
Sbjct:   120 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0282853 DDB_G0282853 "TCTP family protein 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 64/174 (36%), Positives = 98/174 (56%)

Query:     1 MLVYQDLL--TGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXX 57
             M V++D++  + DEL SD++P  EI NG+++EV+ K V +   V V+ GAN +       
Sbjct:     1 MRVFKDIVGYSHDELCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEED 60

Query:    58 XXXXXXXXK-VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKN 113
                     K V+++VD  RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+
Sbjct:    61 EGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKD 119

Query:   114 IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
                  K +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:   120 AADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC1F12.02c SPAC1F12.02c "translationally controlled tumor protein homolog (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 62/172 (36%), Positives = 99/172 (57%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXX 58
             ML+Y+D+++GDEL+SD++  KE+++ I++E + + V   QG  DVDIGANPS        
Sbjct:     1 MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGG-DVDIGANPSAEDAEENA 58

Query:    59 XXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  
Sbjct:    59 EEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAI 115

Query:   116 GATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   116 GFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

UNIPROTKB|Q6XIN1 Tctp "Translationally-controlled tumor protein homolog" [Drosophila yakuba (taxid:7245)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 60/175 (34%), Positives = 96/175 (54%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
             M +Y+D++TGDE+ +D++  K ++  +++EV GK + +   D+ + GAN S         
Sbjct:     1 MKIYKDIITGDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTD 59

Query:    60 XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+ 
Sbjct:    60 ITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMN 117

Query:   116 GATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 168
              A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   118 KAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172

GO:0005509 "calcium ion binding" evidence=ISS

GO:0045298 "tubulin complex" evidence=ISS

FB|FBgn0037874 Tctp "Translationally controlled tumor protein ortholog (H. sapiens)" [Drosophila melanogaster (taxid:7227)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 60/175 (34%), Positives = 97/175 (55%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
             M +Y+D++TGDE+ +D++  K +++ +++EV GK + +   D+ + GAN S         
Sbjct:     1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTD 59

Query:    60 XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+ 
Sbjct:    60 ITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMN 117

Query:   116 GATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 168
              A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   118 KAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172

GO:0005737 "cytoplasm" evidence=NAS

GO:0045793 "positive regulation of cell size" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0005088 "Ras guanyl-nucleotide exchange factor activity" evidence=IDA

MGI|MGI:104890 Tpt1 "tumor protein, translationally-controlled 1" [Mus musculus (taxid:10090)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 62/174 (35%), Positives = 94/174 (54%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVD-IGANPSXXXXXXX 57
             M++Y+DL++ DEL SD +  +EI +G+  EVEGK V   +GA+D   IG N S       
Sbjct:     1 MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGE 60

Query:    58 XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                      V DIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA
Sbjct:    61 GTESTVVTGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGA 118

Query:   118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
                 K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   119 AEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005771 "multivesicular body" evidence=ISO

GO:0008134 "transcription factor binding" evidence=IPI

GO:0019827 "stem cell maintenance" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=IDA

GO:2000384 "negative regulation of ectoderm development" evidence=IMP

RGD|621623 Tpt1 "tumor protein, translationally-controlled 1" [Rattus norvegicus (taxid:10116)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 62/174 (35%), Positives = 94/174 (54%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVD-IGANPSXXXXXXX 57
             M++Y+DL++ DEL SD +  +EI +G+  EVEGK V   +GA+D   IG N S       
Sbjct:     1 MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGE 60

Query:    58 XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                      V DIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA
Sbjct:    61 GTESTVVTGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGA 118

Query:   118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
                 K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   119 AEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005771 "multivesicular body" evidence=ISO

GO:0007283 "spermatogenesis" evidence=IEP

GO:0008134 "transcription factor binding" evidence=ISO

GO:0008283 "cell proliferation" evidence=TAS

GO:0009615 "response to virus" evidence=ISO

GO:0019827 "stem cell maintenance" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:2000384 "negative regulation of ectoderm development" evidence=ISO

GO:0045298 "tubulin complex" evidence=ISO

SGD|S000001539 TMA19 "Protein that associates with ribosomes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 57/157 (36%), Positives = 90/157 (57%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             M++Y+D+ + DELLSD++  K +++ +++E +   V  G  ++DIGANPS          
Sbjct:     1 MIIYKDIFSNDELLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEE 59

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEER-QEI--FKKNIEGA 117
                   V ++V +FRLQ Q AFDKK F+TY+K ++K +  KL E   +E+  F+K  +  
Sbjct:    60 GAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTY 116

Query:   118 TKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 154
              K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   117 VKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006412 "translation" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005840 "ribosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0002181 "cytoplasmic translation" evidence=IMP

UNIPROTKB|E2RMA1 TPT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 60/174 (34%), Positives = 92/174 (52%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVD-IGANPSXXXXXXX 57
             M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V   +G +D   IG N S       
Sbjct:     1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query:    58 XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                      V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct:    61 GTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118

Query:   118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
                 K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   119 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

GO:0045298 "tubulin complex" evidence=IEA

GO:0009615 "response to virus" evidence=IEA

GO:0005771 "multivesicular body" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6BP09	TCTP_DEBHA	No assigned EC number	0.3949	0.8928	0.8982	yes	no
P43347	TCTP_CHICK	No assigned EC number	0.3563	0.9880	0.9651	yes	no
P35681	TCTP_ORYSJ	No assigned EC number	0.8511	1.0	1.0	yes	no
P0CR82	TCTP_CRYNJ	No assigned EC number	0.4176	0.9702	0.9760	yes	no
Q6C4G1	TCTP_YARLI	No assigned EC number	0.3705	0.9702	0.9760	yes	no
P13693	TCTP_HUMAN	No assigned EC number	0.3735	0.9880	0.9651	yes	no
Q54RX6	TCTP1_DICDI	No assigned EC number	0.4080	0.9880	0.9540	yes	no
Q4IJT5	TCTP_GIBZE	No assigned EC number	0.4367	0.9761	0.9647	yes	no
Q293Y0	TCTP_DROPS	No assigned EC number	0.3657	0.9821	0.9593	yes	no
O03992	TCTP_FRAAN	No assigned EC number	0.8529	1.0	0.9882	N/A	no
Q8LRM8	TCTP_WHEAT	No assigned EC number	0.7976	1.0	1.0	N/A	no
Q944T2	TCTP_SOYBN	No assigned EC number	0.8630	1.0	1.0	no	no
Q9ZRX0	TCTP_PSEMZ	No assigned EC number	0.8154	0.9940	1.0	N/A	no
Q9VGS2	TCTP_DROME	No assigned EC number	0.3828	0.9821	0.9593	yes	no
Q9XHL7	TCTP_TOBAC	No assigned EC number	0.8154	1.0	1.0	N/A	no
Q9M5I8	TCTP_CUCME	No assigned EC number	0.7916	1.0	1.0	N/A	no
P35691	TCTP_YEAST	No assigned EC number	0.4076	0.8928	0.8982	yes	no
P28014	TCTP_MEDSA	No assigned EC number	0.8214	0.9940	1.0	N/A	no
Q8H6A5	TCTP_MAIZE	No assigned EC number	0.7559	0.9940	1.0	N/A	no
Q9DGK4	TCTP_DANRE	No assigned EC number	0.3965	0.9821	0.9649	yes	no
P50906	TCTP_PEA	No assigned EC number	0.8273	0.9940	1.0	N/A	no
P61288	TCTP_PIG	No assigned EC number	0.3735	0.9880	0.9651	yes	no
Q2PS27	TCTP_CUCMA	No assigned EC number	0.8571	1.0	1.0	N/A	no
Q5E984	TCTP_BOVIN	No assigned EC number	0.3678	0.9880	0.9651	yes	no
Q2UR29	TCTP_ASPOR	No assigned EC number	0.3620	0.9940	0.9653	yes	no
Q5J907	TCTP_ELAGV	No assigned EC number	0.8869	1.0	1.0	N/A	no
P31265	TCTP_ARATH	No assigned EC number	0.8095	1.0	1.0	yes	no
Q9M5G3	TCTP_HORVU	No assigned EC number	0.8095	1.0	1.0	N/A	no
P63029	TCTP_RAT	No assigned EC number	0.3965	0.9880	0.9651	yes	no
P63028	TCTP_MOUSE	No assigned EC number	0.3965	0.9880	0.9651	yes	no
Q9ZSW9	TCTP_HEVBR	No assigned EC number	0.9464	1.0	1.0	N/A	no
P43348	TCTP_RABIT	No assigned EC number	0.3678	0.9880	0.9651	yes	no
P43349	TCTP_SOLTU	No assigned EC number	0.8452	1.0	1.0	N/A	no
Q6FKB6	TCTP_CANGA	No assigned EC number	0.3821	0.8928	0.8982	yes	no
Q7QCK2	TCTP_ANOGA	No assigned EC number	0.4046	0.9761	0.9590	yes	no
Q944W6	TCTP_BRAOL	No assigned EC number	0.7797	1.0	1.0	N/A	no
A5A6K2	TCTP_PANTR	No assigned EC number	0.3735	0.9880	0.9651	yes	no
Q6DUX3	TCTP_SOLLC	No assigned EC number	0.8511	1.0	1.0	N/A	no
Q6CTH3	TCTP_KLULA	No assigned EC number	0.4076	0.8928	0.8982	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_2100027 SubName- Full=Putative uncharacterized protein; (168 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
pfam00838	165	pfam00838, TCTP, Translationally controlled tumour	5e-74
PTZ00151	172	PTZ00151, PTZ00151, translationally controlled tum	3e-36

>gnl|CDD|189736 pfam00838, TCTP, Translationally controlled tumour protein

 Score =  218 bits (558), Expect = 5e-74
 Identities = 86/169 (50%), Positives = 112/169 (66%), Gaps = 8/169 (4%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEG 59
           ML+Y+D  +GDEL SDSFP K + N +++EV+GK V + G  DV IGANPSAEG +E  G
Sbjct: 1   MLIYKDAFSGDELFSDSFPMK-LVNDLVYEVDGKMVTRTGGDDVLIGANPSAEGGEE--G 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEG 116
           VD+   +VVDIV  FRLQE  +FDKK F TY+K ++K +  KL EE  E   +FKKNI+G
Sbjct: 58  VDETVERVVDIVLNFRLQET-SFDKKSFKTYIKGYMKAVKAKLQEENPERVSLFKKNIQG 116

Query: 117 ATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 165
             K LL+K  D QFF+GESM+ DG +    Y+E    P  ++  D L E
Sbjct: 117 WVKSLLAKFKDYQFFIGESMNPDGMVALMNYREDGETPYMIFFKDGLIE 165

Length = 165

>gnl|CDD|173440 PTZ00151, PTZ00151, translationally controlled tumor-like protein; Provisional

 Score =  123 bits (310), Expect = 3e-36
 Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 12/175 (6%)

Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ TGDE+ SDS+    P+   E + I +EV+ K V++G  D  I  N S EG  
Sbjct: 1   MKVYKDVFTGDEVCSDSYKQLDPFGNAEFSEIAFEVKSKKVIKGNEDYGIADN-SEEG-- 57

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
           + EGVD     V+DIVD F+LQ  P F KK++ TY+K++++ +   L E   +R E FK 
Sbjct: 58  DVEGVDADVETVIDIVDAFKLQSTP-FTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKT 116

Query: 113 NIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
           N +   K +L    D +F++GES+  +  L++ YYK     P F+YI D LKE +
Sbjct: 117 NAQPFVKHILENFDDFEFYLGESLDCEAGLIYGYYKGEELAPRFVYIKDGLKEER 171

Length = 172

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PTZ00151	172	translationally controlled tumor-like protein; Pro	100.0
PF00838	165	TCTP: Translationally controlled tumour protein; I	100.0
KOG1727	169	consensus Microtubule-binding protein (translation	100.0

>PTZ00151 translationally controlled tumor-like protein; Provisional

Probab=100.00  E-value=1.9e-78  Score=486.13  Aligned_cols=163  Identities=40%  Similarity=0.710  Sum_probs=156.2

Q ss_pred             CeEeeccCCCCeecccCCCce------EeeCCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEEeeeeecc
Q 030941            1 MLVYQDLLTGDELLSDSFPYK------EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTF   74 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~------~v~~~~~~eV~~k~v~~~~~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~   74 (168)
                      ||||||||||||||||+||++      ++ +|++|||+||+|+|+.++  ||+|||||+++ +|++++++++|||||+||
T Consensus         1 MiIykDi~tgDEm~SDsyk~~~~~~~~~~-~~~~yEV~~k~v~~~~~d--ig~n~saee~~-~e~~d~~~~~vvDIV~~f   76 (172)
T PTZ00151          1 MKVYKDVFTGDEVCSDSYKQLDPFGNAEF-SEIAFEVKSKKVIKGNED--YGIADNSEEGD-VEGVDADVETVIDIVDAF   76 (172)
T ss_pred             CeEEEecccCCeeeccccccccccccccc-CCEEEEEeeEEEEECCcc--ccCCCCccccc-ccccccccEEEEEeeecC
Confidence            999999999999999999998      55 579999999999998765  69999999853 688999999999999999


Q ss_pred             ccccCCCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCC
Q 030941           75 RLQEQPAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGA  151 (168)
Q Consensus        75 ~Lqe~t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg  151 (168)
                      |||| |+||||+|++|||+|||+|++||   +|+||+.|+++||++||+||+||+|||||+||||||||||||++|||||
T Consensus        77 rLqe-t~f~Kk~Y~~yiK~YmK~vk~~L~e~~pe~v~~Fk~~a~~~vK~il~~Fkd~qFf~GeSmd~dgmv~l~~Yredg  155 (172)
T PTZ00151         77 KLQS-TPFTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHILENFDDFEFYLGESLDCEAGLIYGYYKGEE  155 (172)
T ss_pred             ccee-cCCCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHhcCCceEeecCCCCCCccEEEEeecCCC
Confidence            9999 99999999999999999999999   5999999999999999999999999999999999999999999999999


Q ss_pred             cceEEEEEccccceecC
Q 030941          152 TDPTFLYIADALKEVKC  168 (168)
Q Consensus       152 ~tP~~~f~KdGL~eeK~  168 (168)
                      +||||+||||||+||||
T Consensus       156 ~tP~~~f~KdGL~eeK~  172 (172)
T PTZ00151        156 LAPRFVYIKDGLKEERY  172 (172)
T ss_pred             cceEEEEEcccceeecC
Confidence            99999999999999998

>PF00838 TCTP: Translationally controlled tumour protein; InterPro: IPR018105 Mammalian translationally controlled tumour protein (TCTP) (or P23) is a protein which has been found to be preferentially synthesised in cells during the early growth phase of some types of tumour [, ], but which is also expressed in normal cells

Probab=100.00  E-value=2.2e-76  Score=472.65  Aligned_cols=161  Identities=44%  Similarity=0.774  Sum_probs=148.5

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEec-cccccCCCCCCCCCCCCCCCcccceEEEeeeeeccccccC
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQG-AVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~-~~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lqe~   79 (168)
                      ||||||||||||||||+||++++ +|+||||+||+|+++ .++.+||||||||+++  +++++++++|||||+|||||| 
T Consensus         1 MiiykDiisgdEm~SD~y~~~~~-~~~~yeV~gk~vt~~~~d~~liG~N~SaE~~~--e~~~~~~~~viDiV~~~~L~e-   76 (165)
T PF00838_consen    1 MIIYKDIISGDEMFSDSYKIELV-DDVFYEVEGKMVTRTGIDDSLIGANPSAEEGE--EGTDDSVETVIDIVDNHRLQE-   76 (165)
T ss_dssp             EEEEEETTTTTEEEETTSCEEEG-CTTEEEEE--EEEEETTB-TTTSSS--SSSSS--SSSCCCECEEEHHHHHTTEEE-
T ss_pred             CeEEeccCCCCEecccCcccccc-CCEEEEEEEEEEeeccccccccccCcccccCc--cCCCCccEEccceeeccccee-
Confidence            99999999999999999999555 689999999999995 4567899999999875  889999999999999999999 


Q ss_pred             CCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCcceEE
Q 030941           80 PAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF  156 (168)
Q Consensus        80 t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~  156 (168)
                      |+||||+|++|||+|||+|++||   +|+||++|+++|+++||+||+||||||||+||||||||||||++|||||+||||
T Consensus        77 t~f~Kk~y~~yiK~Y~K~i~~kL~e~~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesm~~dgmv~l~~yredg~tP~~  156 (165)
T PF00838_consen   77 TSFDKKSYKAYIKDYMKKIKEKLEENGPERVKAFKKGAQEFVKKILANFKDYQFFTGESMDPDGMVALLNYREDGVTPYF  156 (165)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHTGGGCEEEEETTCCTTS-EEEEEEETTSSSEEE
T ss_pred             ecccHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHhHHHHHHHHhhccccccccccccCCCCcEEEEEecCCCccEEE
Confidence            99999999999999999999999   799999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccccce
Q 030941          157 LYIADALKE  165 (168)
Q Consensus       157 ~f~KdGL~e  165 (168)
                      +||||||+|
T Consensus       157 ~f~KdGL~E  165 (165)
T PF00838_consen  157 IFFKDGLKE  165 (165)
T ss_dssp             EEEGGGEEE
T ss_pred             EEEcccccC
Confidence            999999987

The physiological function of TCTP is still not known. It was first identified as a histamine-releasing factor, acting in IgE +-dependent allergic reactions. In addition, TCTP has been shown to bind to tubulin in the cytoskeleton, has a high affinity for calcium, is the binding target for the antimalarial compound artemisinin, and is induced in vitamin D-dependent apoptosis. TCTP production is thought to be controlled at the translational as well as the transcriptional level []. TCTP is a hydrophilic protein of 18 to 20 kD. TCTPs do not share significant sequence similarity with any other class of proteins. Recently, the structure of TCTP was determined and exhibited significant structural similarity to the human protein Mss4, which is a guanine nucleotide-free chaperone of the Rab protein []. Close homologues have been found in plants [], earthworm [], Caenorhabditis elegans (F52H2.11), Hydra, Saccharomyces cerevisiae (YKL056c) [] and Schizosaccharomyces pombe (SpAC1F12.02c).; PDB: 2KWB_A 2LOY_A 1TXJ_A 1H6Q_A 1H7Y_A 3P3K_A 1YZ1_C 3EBM_D 2HR9_A.

>KOG1727 consensus Microtubule-binding protein (translationally controlled tumor protein) [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=100.00  E-value=3.8e-68  Score=421.99  Aligned_cols=166  Identities=47%  Similarity=0.793  Sum_probs=155.9

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEecccc-ccCCCCCCCCCCCCCCCcccceEEEeeeeeccccccC
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVD-VDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~~~~-~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lqe~   79 (168)
                      |+||+||||||||+||+||++++++ +||||+||+|+|+++| .+||+|||||++.+++++++++++|+|||+|||||| 
T Consensus         1 mliy~di~t~del~sd~~~~k~i~~-l~~EvegK~vsr~~~D~~lig~NpSaE~~~edegte~~~~~~vdiV~~~rLqE-   78 (169)
T KOG1727|consen    1 MLIYKDIITGDELLSDSYPMKEVDD-LCYEVEGKMVTRTNGDDSLIGANPSAEEGAEDEGTEETVETVVDIVLNFRLQE-   78 (169)
T ss_pred             CceeeccccCchhcccchhHHHHHh-hhheeeceeccccCccchhcccCccccccccCCcchhheeeeeeeeeeecccc-
Confidence            8999999999999999999999976 9999999999999665 469999999997558999999999999999999999 


Q ss_pred             CCCCHHHHHHHHHHHHHHhccCCChHHHHHHHHhHHHHHHHHHh-cCCCcceeecCCCCCCceEEEEeccCCC-cceEEE
Q 030941           80 PAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLS-KLSDLQFFVGESMHDDGCLVFAYYKEGA-TDPTFL  157 (168)
Q Consensus        80 t~f~Kk~y~~yiK~Y~K~ik~kL~~erv~~F~~~a~~~vK~il~-nfkd~qFf~Gesmd~dgmv~l~~y~edg-~tP~~~  157 (168)
                      ++++|++|++|||+|||+|++||+++++..|++++++++|.++. ||||||||+||||||||||||++||||| +||+|+
T Consensus        79 q~~~ke~~k~yik~ymK~v~~klee~~~~~f~k~~~~a~q~~h~anFKnyqFFIGEnMnpdgmVal~~YRedg~~~P~~~  158 (169)
T KOG1727|consen   79 QSPFKERFKAYIKGYMKAVKAKLEEEDVDVFKKNIQGAEKIKHIANFKNYQFFIGENMNPDGMVALLDYREDGGVTPYMI  158 (169)
T ss_pred             cchHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccchHHHHHHhhccccceeeecccCCCCceEEEeeeecCCCcCceEE
Confidence            55559999999999999999999889999999999988887766 9999999999999999999999999966 999999


Q ss_pred             EEccccceecC
Q 030941          158 YIADALKEVKC  168 (168)
Q Consensus       158 f~KdGL~eeK~  168 (168)
                      ||||||++|||
T Consensus       159 ffk~gl~~ekc  169 (169)
T KOG1727|consen  159 FFKDGLEEEKC  169 (169)
T ss_pred             EeccCcccccC
Confidence            99999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
1h6q_A	168	Translationally Controlled Tumor-Associated Protein		4e-22
2hr9_A	180	Solution Structure Of Human Translationally Control		6e-21
1yz1_A	174	Crystal Structure Of Human Translationally Controll		6e-21
3ebm_A	180	Crystal Structure Of Human Translationally Controll		6e-20
3p3k_A	183	The Crystal Structure Of Translationally Controlled		5e-17
1txj_A	171	Crystal Structure Of Translationally Controlled Tum		5e-16
2kwb_A	189	Minimal Constraint Solution Nmr Structure Of Transl		4e-15

>pdb|1H6Q|A Chain A, Translationally Controlled Tumor-Associated Protein P23fyp From Schizosaccharomyces Pombe Length = 168

Iteration: 1
 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXX 59
           ML+Y+D+++GDEL+SD++  KE+++ I++E + + V V+   DVDIGANPS         
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAE 59
Query: 60  XXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
                  V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 60  EGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116
Query: 117 ATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL 163
             K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L
Sbjct: 117 FVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGL 163

>pdb|2HR9|A Chain A, Solution Structure Of Human Translationally Controlled Tumor Protein Length = 180

Iteration: 1
 Score = 96.7 bits (239), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                    V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 61  GTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118
Query: 118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
               K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 119 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|1YZ1|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein Length = 174

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 3   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 62
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                    V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 63  GTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 120
Query: 118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
               K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 121 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 174

>pdb|3EBM|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein (Htctp) Mutant E12v Length = 180

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ D + SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 1   MIIYRDLISHDVMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                    V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 61  GTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118
Query: 118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
               K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 119 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|3P3K|A Chain A, The Crystal Structure Of Translationally Controlled Tumor Protein (Tctp) Of Plasmodium Falciparum Length = 183

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXX 55
           M V++D+ T DE+ SDS+    P++  E   I +EV+    ++G  D  I  N       
Sbjct: 5   MKVFKDVFTNDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEG 64
Query: 56  XXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
                      V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK 
Sbjct: 65  MGADVE----HVIDIVDSFQLT-STAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKT 119
Query: 113 NIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             +   K +L+   D +F++GES+  +  ++++YYK     P F+YI+D L E K
Sbjct: 120 KAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 174

>pdb|1TXJ|A Chain A, Crystal Structure Of Translationally Controlled Tumour- Associated Protein (Tctp) From Plasmodium Knowlesi Length = 171

Iteration: 1
 Score = 80.5 bits (197), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXX 55
           M VY+D+ T DE+ SDS+    P+   +   I +EV+    ++G  D  I  N       
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSEEAVDG 60
Query: 56  XXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
                     +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK 
Sbjct: 61  MGADVE----QVIDIVDSFQLT-STSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115
Query: 113 NIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             +   K +L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 116 KAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>pdb|2KWB|A Chain A, Minimal Constraint Solution Nmr Structure Of Translationally Controlled Tumor Protein (Tctp) From C.Elegans, Northeast S Genomics Consortium Target Wr73 Length = 189

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
           ML+Y+D+ T DEL SDSFP K +++ +++E +GK VV+   ++ + G+NPS         
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDG 59
Query: 60  XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQ-----EIFKKN 113
                 + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK 
Sbjct: 60  SDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKK 119
Query: 114 IEGATKFLLSK--LSDLQFFVGESM---HDDGCLVFAYYK--EGATDPTFLYIADALKEV 166
           I+G    LL+K    +L FF+GE      ++G +    Y+  +G   PT + + +A+ E 
Sbjct: 120 IQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEE 179
Query: 167 KC 168
           KC
Sbjct: 180 KC 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
1yz1_A	174	Translationally controlled tumor protein; unknown	9e-66
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	2e-58
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	4e-58
1txj_A	171	Translationally controlled tumour-associated prote	3e-56
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A Length = 174

 Score =  197 bits (503), Expect = 9e-66
 Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 8/174 (4%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADED 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E 
Sbjct: 3   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EG 61

Query: 58  EGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNI 114
           EG +   +  VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E    F    
Sbjct: 62  EGTESTVITGVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 120

Query: 115 EGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
               K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 121 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 174

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A Length = 189

 Score =  179 bits (456), Expect = 2e-58
 Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 15/182 (8%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSAEGADEDEG 59
           ML+Y+D+ T DEL SDSFP K + + +++E +GK VV+   ++ + G+NPSAE   ED+G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDG 59

Query: 60  VDDQAVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQEI-----FKKN 113
            D+   + +DIV   +L E   + D   F  Y+K+F+K +   + +  ++      FKK 
Sbjct: 60  SDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKK 119

Query: 114 IEGATKFLLSKLS--DLQFFVGESM---HDDGCLVFAYYKE--GATDPTFLYIADALKEV 166
           I+G    LL+K    +L FF+GE      ++G +    Y++  G   PT + + +A+ E 
Sbjct: 120 IQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEE 179

Query: 167 KC 168
           KC
Sbjct: 180 KC 181

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A Length = 168

 Score =  178 bits (452), Expect = 4e-58
 Identities = 64/171 (37%), Positives = 103/171 (60%), Gaps = 8/171 (4%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEG 59
           ML+Y+D+++GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE    +E 
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAED--AEEN 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
            ++    V ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 58  AEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116

Query: 117 ATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct: 117 FVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A Length = 171

 Score =  173 bits (440), Expect = 3e-56
 Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 13/175 (7%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ T DE+ SDS+  ++         I +EV+    ++G  D  I  N      +
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSE----E 56

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKK 112
             +G+     +V+DIVD+F+L       KK++  Y+K +++ +   L E++ +   +FK 
Sbjct: 57  AVDGMGADVEQVIDIVDSFQLTSTS-LSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115

Query: 113 NIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             +   K +L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 116 KAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 17/114 (14%)

Query: 55  DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFK-KN 113
           D + G      K  DI+  F       FD K      K  +        EE   I   K+
Sbjct: 8   DFETGEHQYQYK--DILSVFEDAFVDNFDCKDVQDMPKSILS------KEEIDHIIMSKD 59

Query: 114 IEGATKFLLSKLSD-----LQFFVGESMHDD-GCLVFAYYKE--GATDPTFLYI 159
               T  L   L       +Q FV E +  +   L+     E    +  T +YI
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	100.0
1yz1_A	174	Translationally controlled tumor protein; unknown	100.0
1txj_A	171	Translationally controlled tumour-associated prote	100.0
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	100.0

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A

Probab=100.00  E-value=3.5e-82  Score=505.44  Aligned_cols=164  Identities=38%  Similarity=0.713  Sum_probs=160.4

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEe-ccccccCCCCCCCCCCCCCCCcccceEEEeeeeeccccccC
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~-~~~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lqe~   79 (168)
                      |||||||||||||||||||++++ +|++|||+||+|+| +++|++||||||||++  +|++++++++|||||+|||||| 
T Consensus         1 MiiykDiitgDEm~SDsy~~k~v-d~~~yEV~gk~v~~~~~~didiGaN~SaE~~--~eg~d~~~~~vvdiV~~~rLqe-   76 (168)
T 1h6q_A            1 MLLYKDVISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDA--EENAEEGTETVNNLVYSFRLSP-   76 (168)
T ss_dssp             CCEEECTTTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSC--SCSSCCCEEEEEHHHHHTTCEE-
T ss_pred             CeEEeecCCCCEEeecCcccEee-CCEEEEEeeEEEEEccCCccccccCcccccc--ccccCCceEEeeeeeEeccccc-
Confidence            99999999999999999999999 67999999999999 9999999999999985  5899999999999999999999 


Q ss_pred             CCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCcceEE
Q 030941           80 PAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF  156 (168)
Q Consensus        80 t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~  156 (168)
                      |+|||++|++|||+|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||+||||
T Consensus        77 t~fdKk~y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GEsmd~dgmvvl~~Yredg~tP~~  156 (168)
T 1h6q_A           77 TSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYM  156 (168)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEE
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCCCCeEE
Confidence            99999999999999999999999   689999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccccceecC
Q 030941          157 LYIADALKEVKC  168 (168)
Q Consensus       157 ~f~KdGL~eeK~  168 (168)
                      +||||||+||||
T Consensus       157 ~f~K~GL~eeK~  168 (168)
T 1h6q_A          157 IFFKDGLVSEKF  168 (168)
T ss_dssp             EEESTTCEEECC
T ss_pred             EEEcccceeecC
Confidence            999999999998

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A

Probab=100.00  E-value=3.6e-82  Score=508.09  Aligned_cols=166  Identities=37%  Similarity=0.684  Sum_probs=139.4

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEecccccc---CCCCCCCCCCCCCCCcccceEEEeeeeeccccc
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQ   77 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~~~~~d---iG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lq   77 (168)
                      |||||||||||||||||||++++.||++|||+||+|+|++++++   ||||||||+++ +|++++++++|||||+|||||
T Consensus         3 MiiykDiitgDEm~SDsy~~~~~~dg~~yEV~gk~v~~~~g~idd~liGaN~SaE~~~-~eg~d~~~~~~vdiV~~~rLq   81 (174)
T 1yz1_A            3 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQ   81 (174)
T ss_dssp             CEEEEETTTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCE
T ss_pred             eEEEeecCCCCEEeecCcccEEccCCEEEEEeeEEEEecCCCccccccccCccccccc-ccccCcceEEcceeEeecccc
Confidence            99999999999999999999999889999999999999999886   99999999864 689999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCcce
Q 030941           78 EQPAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP  154 (168)
Q Consensus        78 e~t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP  154 (168)
                      | |+|||++|++|||+|||+|++||   +||||++|+++||++||+||+||||||||+||||||||||||++|||||+||
T Consensus        82 e-t~fdKk~y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg~tP  160 (174)
T 1yz1_A           82 E-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP  160 (174)
T ss_dssp             E-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCE
T ss_pred             c-cCcCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCccEEEEEccCCCcCe
Confidence            9 99999999999999999999999   6899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEccccceecC
Q 030941          155 TFLYIADALKEVKC  168 (168)
Q Consensus       155 ~~~f~KdGL~eeK~  168 (168)
                      ||+||||||+||||
T Consensus       161 ~~~f~K~GL~eeK~  174 (174)
T 1yz1_A          161 YMIFFKDGLEMEKC  174 (174)
T ss_dssp             EEEEEGGGEEEEEC
T ss_pred             EEEEEcccceeecC
Confidence            99999999999998

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A

Probab=100.00  E-value=8.6e-80  Score=492.80  Aligned_cols=162  Identities=34%  Similarity=0.653  Sum_probs=143.8

Q ss_pred             CeEeeccCCCCeecccCC----Cce--EeeCCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEEeeeeecc
Q 030941            1 MLVYQDLLTGDELLSDSF----PYK--EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTF   74 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y----~~~--~v~~~~~~eV~~k~v~~~~~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~   74 (168)
                      ||||||||||||||||||    |++  ++ +|++|||+||+|+|+++|++||||||||++  +|+++  +++|||||+||
T Consensus         1 MiIykDiitgDEm~SDsy~~~~~~k~~e~-~~~~yEV~gk~v~~~~~~idiGaN~saE~~--~e~~d--~~~vvdIV~~~   75 (171)
T 1txj_A            1 MKVYKDVFTNDEVCSDSYNQEDPFGIADF-REIAFEVKSNKRIKGNDDYGIADNSEEAVD--GMGAD--VEQVIDIVDSF   75 (171)
T ss_dssp             CEEEEETTTCCEEEETTSCCBCGGGCGGG-TTTEEEEECCEEESCC----------------CCCCS--SCEEEHHHHHH
T ss_pred             CeEEeecCcCCEEEeccccccCCcccccc-CCEEEEEEeEEEEECCCcccccCCcccccc--ccCcc--eeecceEEEec
Confidence            999999999999999999    999  88 569999999999999999999999999985  47777  99999999999


Q ss_pred             ccccCCCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCC
Q 030941           75 RLQEQPAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGA  151 (168)
Q Consensus        75 ~Lqe~t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg  151 (168)
                      |||| |+||||+|++|||+|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||
T Consensus        76 rL~e-t~f~Kk~y~~yiK~YmK~i~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg  154 (171)
T 1txj_A           76 QLTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEE  154 (171)
T ss_dssp             TCEE-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTC
T ss_pred             ceee-cCCCHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCC
Confidence            9999 99999999999999999999999   6899999999999999999999999999999999999999999999999


Q ss_pred             cceEEEEEccccceecC
Q 030941          152 TDPTFLYIADALKEVKC  168 (168)
Q Consensus       152 ~tP~~~f~KdGL~eeK~  168 (168)
                      +||||+||||||+||||
T Consensus       155 ~tP~~~f~K~GL~eeK~  171 (171)
T 1txj_A          155 VTPRFVYISDGLYEEKF  171 (171)
T ss_dssp             SSCEEEEEGGGEEEEEC
T ss_pred             CCeEEEEEcccceeecC
Confidence            99999999999999998

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A

Probab=100.00  E-value=3.4e-78  Score=489.82  Aligned_cols=166  Identities=36%  Similarity=0.676  Sum_probs=160.2

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEecccccc-CCCCCCCCCCCCCCCcccceEEEeeeeeccccccC
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD-IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~~~~~d-iG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lqe~   79 (168)
                      |||||||||||||||||||++++ +|++|||+||+|+|++++++ ||||||||+++++|++++++++|||||+|||||| 
T Consensus         1 MiIYkDiitgDEmfSDsy~~k~v-d~~~yEV~gK~v~~~~gdidl~GaN~SaE~~~~~eg~d~~~~~vvDIV~n~rLqe-   78 (189)
T 2kwb_A            1 MLIYKDIFTDDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVE-   78 (189)
T ss_dssp             CEEEEESSCTTTCEEECCCCEEE-TTTEEEEECCEECCBTTBCCCCCCSCCCSSCCSSCCCGGGCSSEEHHHHTTTEEE-
T ss_pred             CeEEeecCCCCEEeecCccCEee-CCEEEEEeeEEEEECCccccccccCccccccccccccCCccEEcceeEEecceee-
Confidence            99999999999999999999999 57999999999999999998 8999999985447899999999999999999999 


Q ss_pred             CCC--CHHHHHHHHHHHHHHhccCC---ChHH--HHHHHHhHHHHHHHHHh--cCCCcceeecCCCCC---CceEEEEec
Q 030941           80 PAF--DKKQFVTYMKRFIKLLTPKL---SEER--QEIFKKNIEGATKFLLS--KLSDLQFFVGESMHD---DGCLVFAYY  147 (168)
Q Consensus        80 t~f--~Kk~y~~yiK~Y~K~ik~kL---~~er--v~~F~~~a~~~vK~il~--nfkd~qFf~Gesmd~---dgmv~l~~y  147 (168)
                      |+|  ||++|++|||+|||+|++||   +|+|  |++|+++||++||+||+  ||||||||+||||||   ||||||++|
T Consensus        79 t~f~~dKk~y~~yiK~YmK~v~~kLee~~pe~e~v~~Fk~~a~~~vK~iL~k~~Fkd~qFf~GESmd~~~~dGmv~l~~Y  158 (189)
T 2kwb_A           79 MNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEY  158 (189)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCHHHHTTCEEEEEHHHHHHTSCCCEEEEEE
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHhccccccCccEeccCCCCCCCCCceEEEEEE
Confidence            999  99999999999999999999   5777  99999999999999999  999999999999999   999999999


Q ss_pred             cC-CC-cceEEEEEccccceecC
Q 030941          148 KE-GA-TDPTFLYIADALKEVKC  168 (168)
Q Consensus       148 ~e-dg-~tP~~~f~KdGL~eeK~  168 (168)
                      || || +||||+||||||+||||
T Consensus       159 re~dg~~tP~~~ffK~GL~eeK~  181 (189)
T 2kwb_A          159 RDVDGTEVPTLMLVKEAIIEEKC  181 (189)
T ss_dssp             EEETTEEEEEEEEETTTEEEECC
T ss_pred             EcCCCCcCeEEEEEccCceEEEe
Confidence            99 99 99999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	168
d1yz1a1	172	b.88.1.2 (A:1-172) Translationally controlled tumo	4e-72
d1h6qa_	168	b.88.1.2 (A:) Translationally controlled tumor pro	1e-68
d1txja_	171	b.88.1.2 (A:) Translationally controlled tumor pro	4e-62

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  212 bits (542), Expect = 4e-72
 Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 8/174 (4%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADED 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EG 59

Query: 58  EGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
           EG +   +  VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 60  EGTESTVITGVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118

Query: 118 T---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168
               K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 119 AEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 168

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  203 bits (519), Expect = 1e-68
 Identities = 65/171 (38%), Positives = 104/171 (60%), Gaps = 8/171 (4%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEG 59
           ML+Y+D+++GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE A+E   
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAEDAEE--N 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
            ++    V ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 58  AEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116

Query: 117 ATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct: 117 FVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]} Length = 171

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

 Score =  187 bits (476), Expect = 4e-62
 Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 13/175 (7%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ T DE+ SDS+  ++         I +EV+    ++G  D  I  N      +
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNS----EE 56

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
             +G+     +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK 
Sbjct: 57  AVDGMGADVEQVIDIVDSFQLTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115

Query: 113 NIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 167
             +   K +L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 116 KAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d1h6qa_	168	Translationally controlled tumor protein TCTP (his	100.0
d1yz1a1	172	Translationally controlled tumor protein TCTP (his	100.0
d1txja_	171	Translationally controlled tumor protein TCTP (his	100.0

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.5e-79  Score=488.86  Aligned_cols=164  Identities=38%  Similarity=0.712  Sum_probs=157.8

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEecc-ccccCCCCCCCCCCCCCCCcccceEEEeeeeeccccccC
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGA-VDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~~-~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lqe~   79 (168)
                      ||||||||||||||||+||++++ +|++|||+||+|++++ ++.+||||||||+++  |++++++++|+|||+|||||| 
T Consensus         1 MiIYkDiitgDEmfSDsyk~~~v-d~~~yEV~gk~vt~~~~~d~~iGaN~saE~~~--e~~~~~~~~~vDiV~~~rL~e-   76 (168)
T d1h6qa_           1 MLLYKDVISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDAE--ENAEEGTETVNNLVYSFRLSP-   76 (168)
T ss_dssp             CCEEECTTTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSCS--CSSCCCEEEEEHHHHHTTCEE-
T ss_pred             CeEEeccCcCCeEeecCccCEEE-cCEEEEEEeEEEEeecCcccccccCccccccc--CCCCCCceEEEEeeecccccc-
Confidence            99999999999999999999999 5799999999999865 467899999999864  788999999999999999999 


Q ss_pred             CCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCcceEE
Q 030941           80 PAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF  156 (168)
Q Consensus        80 t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~  156 (168)
                      |+|||++|++|||+|||+|+++|   +|+||+.|+++||++||+||+||||||||+||||||||||||++|||||+||+|
T Consensus        77 t~f~Kk~y~~yiK~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~tP~~  156 (168)
T d1h6qa_          77 TSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYM  156 (168)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHhHHHHHHHHHhcCccceEeccCCCCCCceEEEEEecCCCcceEE
Confidence            99999999999999999999999   799999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccccceecC
Q 030941          157 LYIADALKEVKC  168 (168)
Q Consensus       157 ~f~KdGL~eeK~  168 (168)
                      +||||||+|||+
T Consensus       157 ~f~KdGL~eeKy  168 (168)
T d1h6qa_         157 IFFKDGLVSEKF  168 (168)
T ss_dssp             EEESTTCEEECC
T ss_pred             EEEccceeeecC
Confidence            999999999996

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-80  Score=495.54  Aligned_cols=166  Identities=37%  Similarity=0.684  Sum_probs=139.5

Q ss_pred             CeEeeccCCCCeecccCCCceEeeCCEEEEEEEEEEEecccccc---CCCCCCCCCCCCCCCcccceEEEeeeeeccccc
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQ   77 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~~~~~~eV~~k~v~~~~~~~d---iG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~Lq   77 (168)
                      ||||||||||||||||+||++++.||++|||+||+|++.++++|   ||||||||+++ +|++++++++|||||+|||||
T Consensus         1 M~IyKDi~tgDE~~SDsy~~k~~~d~~~yEV~gk~v~~~~g~id~~liGaN~SaE~~~-~eg~~~~~~~~vDiV~~~rL~   79 (172)
T d1yz1a1           1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQ   79 (172)
T ss_dssp             CEEEEETTTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCE
T ss_pred             CeEEeecCcCCeEeecCcccEecCCCeEEEEEeEEEEEcccccccccccCCccccccc-cccccccceeccCeEEeeeee
Confidence            99999999999999999999999889999999999999998886   89999999875 789999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCcce
Q 030941           78 EQPAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP  154 (168)
Q Consensus        78 e~t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP  154 (168)
                      | |+|||++|++|||+|||+|++||   +|+||+.|+++||++||+||+||||||||+||||||||||||++|||||+||
T Consensus        80 e-t~f~Kk~y~~yiK~YmK~v~~~L~e~~~e~v~~F~~~a~~~vK~il~~fkd~qFf~GeSmd~dgmvvl~~Yredg~tP  158 (172)
T d1yz1a1          80 E-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP  158 (172)
T ss_dssp             E-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCE
T ss_pred             e-cCCCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhHHHHHHHHhccccceEEccCCCCCCceEEEEEEcCCCcce
Confidence            9 99999999999999999999999   7999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEccccceecC
Q 030941          155 TFLYIADALKEVKC  168 (168)
Q Consensus       155 ~~~f~KdGL~eeK~  168 (168)
                      ||+||||||+||||
T Consensus       159 ~~~f~KdGL~eeKc  172 (172)
T d1yz1a1         159 YMIFFKDGLEMEKC  172 (172)
T ss_dssp             EEEEEGGGEEEEEC
T ss_pred             EEEEEcCceeeecC
Confidence            99999999999999

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

Probab=100.00  E-value=1.8e-74  Score=460.65  Aligned_cols=163  Identities=33%  Similarity=0.621  Sum_probs=143.6

Q ss_pred             CeEeeccCCCCeecccCCCceEee-----CCEEEEEEEEEEEeccccccCCCCCCCCCCCCCCCcccceEEEeeeeeccc
Q 030941            1 MLVYQDLLTGDELLSDSFPYKEIE-----NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFR   75 (168)
Q Consensus         1 MiiykDiisgDEm~SD~y~~~~v~-----~~~~~eV~~k~v~~~~~~~diG~N~SaE~~e~~e~~~~~~~~vvdiV~~~~   75 (168)
                      ||||||||||||||||+||++++.     .+++|||+|+++++++++  +|+|||||++  +||+++++++|||||+|||
T Consensus         1 MiIYkDiisgDEmfSDsyk~~~~~~~~d~~~~~~ev~~~~~~~~~~d--~~~~~~aee~--~eg~~~~~~~vvDiV~~~r   76 (171)
T d1txja_           1 MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDD--YGIADNSEEA--VDGMGADVEQVIDIVDSFQ   76 (171)
T ss_dssp             CEEEEETTTCCEEEETTSCCBCGGGCGGGTTTEEEEECCEEESCC------------------CCCCSSCEEEHHHHHHT
T ss_pred             CeEEeecCcCCeEeeccccccccccccccccEEEEEEEEEEEecccc--cccCCCcccc--ccccCCcceEeeeeEEeee
Confidence            999999999999999999999752     269999999999987655  4556666654  4778899999999999999


Q ss_pred             cccCCCCCHHHHHHHHHHHHHHhccCC---ChHHHHHHHHhHHHHHHHHHhcCCCcceeecCCCCCCceEEEEeccCCCc
Q 030941           76 LQEQPAFDKKQFVTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGAT  152 (168)
Q Consensus        76 Lqe~t~f~Kk~y~~yiK~Y~K~ik~kL---~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~  152 (168)
                      ||| |+||||+|++|||+|||+|++||   +|+||+.|+++||++||+||+|||||||||||||||||||||++|||||+
T Consensus        77 Lqe-t~f~Kk~y~~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~  155 (171)
T d1txja_          77 LTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEV  155 (171)
T ss_dssp             CEE-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTCS
T ss_pred             eee-cCCCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCccceEeccCCCCCCceEEEEEecCCCc
Confidence            999 99999999999999999999999   79999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEccccceecC
Q 030941          153 DPTFLYIADALKEVKC  168 (168)
Q Consensus       153 tP~~~f~KdGL~eeK~  168 (168)
                      ||||+||||||+|||+
T Consensus       156 tP~~~f~K~GL~eeKy  171 (171)
T d1txja_         156 TPRFVYISDGLYEEKF  171 (171)
T ss_dssp             SCEEEEEGGGEEEEEC
T ss_pred             ceEEEEEccceeeecC
Confidence            9999999999999996