Citrus Sinensis ID: 031015

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Secondary Structure (PSIPRED)
ccHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHcccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHEcccccEEEccccEEEccccccccccccccHHHHHHHHHHHHccEEEEHHHccc
Coil and Loop (DISEMBL)
MAEEHRFQAQEGhrlcanncgffgstatmnlcskcyrdhcLKEQQQASIKTTVenslsasppsssapflgsvpdppalalpevngdkdaDVAVVLEQqqqqppqpnrcsvcrkrigltgfkcrcgtifcgthrypekhgcsfdfkkVGREEIAranplikaEKLEKI
Flexible Loop (DISEMBL)
MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEqqqqqppqpnrcsvCRKRIGLTGFKCRCGTIfcgthrypekhgcsfdfKKVGREEIaranplikaekleki
Low Complexity Region (SEG)
MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENslsasppsssapFLGSVPDPPALALPEVNGDKDADVAVVLEqqqqqppqpNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Disordered region (IsUnstruct)
************HRLCANNCGFFGSTATMNLCSKCYRDHCLK*****************************************************************CSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEI***************
Disordered Region (DISOPRED)
*****************NNCGFFGSTATMNL***********************************************************************PQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Disordered Region (DISEMBL)
**********EGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIK*****************FLGSVPDPPALALPEVNGDKDADVAVVLE***********CSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Disordered Region (DISPRO)
***********GHRLCANNCGFFGSTATMNLCSKCYRDHCLKE*************************************************************PNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q9SJM6	161	Zinc finger A20 and AN1 d	yes	no	0.952	0.987	0.597	2e-52
Q94B40	170	Zinc finger A20 and AN1 d	no	no	0.988	0.970	0.639	1e-43
Q9ZNU9	163	Zinc finger A20 and AN1 d	no	no	0.958	0.981	0.523	3e-38
O49663	176	Zinc finger A20 and AN1 d	no	no	0.886	0.840	0.472	1e-36
Q9SZ69	175	Zinc finger A20 and AN1 d	no	no	0.922	0.88	0.496	6e-36
Q852K5	160	Zinc finger A20 and AN1 d	yes	no	0.904	0.943	0.475	3e-35
Q6H7P8	173	Zinc finger A20 and AN1 d	no	no	0.934	0.901	0.420	1e-34
A3BDI8	171	Zinc finger A20 and AN1 d	no	no	0.946	0.923	0.460	3e-34
A2YEZ6	171	Zinc finger A20 and AN1 d	N/A	no	0.946	0.923	0.460	3e-34
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.892	0.925	0.457	1e-33

>sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1

 Score =  204 bits (520), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 122/169 (72%), Gaps = 10/169 (5%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +  EGHRLC NNCGFFGS+ATMNLCS CY D CLK+QQQAS+K+TVE+SLS  
Sbjct: 1   MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS-- 58

Query: 61  PPSSSAPFLGSVPDPPA--LALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLT 118
                 P +  V +  A  L +P     ++     +  +Q   P +PNRC+VCRKR+GLT
Sbjct: 59  ------PVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLT 112

Query: 119 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           GF CRCGT FCG+HRYPE HGC+FDFK  GREEIA+ANPL+ A KL+KI
Sbjct: 113 GFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

May be involved in environmental stress response.
Arabidopsis thaliana (taxid: 3702)

>sp|Q94B40|SAP6_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/172 (63%), Positives = 127/172 (73%), Gaps = 7/172 (4%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKT-TVENSLSA 59
           MAEEHR Q  E +RLC NNCGF GS+ATMNLCS CY D CLK+QQQ+S    TVE+SLS 
Sbjct: 1   MAEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSV 60

Query: 60  SPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVV----LEQQQQQPPQPNRCSVCRKRI 115
           SPPSSS+  + S   PP L  P V  +     AV+     EQ QQQ  +PNRC+ CRKR+
Sbjct: 61  SPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQ--RPNRCTTCRKRV 118

Query: 116 GLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           GLTGFKCRCGT+FCG HRYPE HGCS+DFK  GREEIA+ANPL+KA KL+KI
Sbjct: 119 GLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1

 Score =  157 bits (397), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/170 (52%), Positives = 118/170 (69%), Gaps = 10/170 (5%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLS-- 58
           MAEEHR Q     RLCANNCGFFGSTAT NLCSKC+RD  L+ Q+Q S  +T +++L+  
Sbjct: 1   MAEEHRLQEP---RLCANNCGFFGSTATQNLCSKCFRD--LQHQEQNS--STAKHALTQS 53

Query: 59  ASPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQ-PNRCSVCRKRIGL 117
            +   ++A    S P PP     E+   K    A    ++   PPQ P RC  CR+R+G+
Sbjct: 54  LAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGI 113

Query: 118 TGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           TGF+CRCG +FCGTHRY E+H CSFDFK++G+++IA+ANP++KA+KLEKI
Sbjct: 114 TGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 102/163 (62%), Gaps = 15/163 (9%)

Query: 14  RLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAPFLGSVP 73
           +LC   CGFFGS + M+LCSKCYR  C +E Q A  K  VE S   SPP S       + 
Sbjct: 20  KLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLF-----IA 74

Query: 74  DPPALALPEVNGDKDADVAVVLE---------QQQQQPPQPNRCSVCRKRIGLTGFKCRC 124
           +PPA+ + E   +K A V V  E          +  +P + NRC  C K++G+ GFKC+C
Sbjct: 75  EPPAVVV-EPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKC 133

Query: 125 GTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           G+ FCG HRYPE H CSFDFK+VGR EIA+ANP++KA+K+++ 
Sbjct: 134 GSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ69|SAP7_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1

 Score =  149 bits (377), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 103/159 (64%), Gaps = 5/159 (3%)

Query: 14  RLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAPFLGS-V 72
           +LC N CGFFGS + MNLCSKCYR    +E Q A  K  V+NSL     S  AP     +
Sbjct: 17  KLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPL 76

Query: 73  PDPPALALPEVNGDKDADVAVVLEQQQQQPPQP----NRCSVCRKRIGLTGFKCRCGTIF 128
              PA     V   + + V V  EQ + +P +P    NRC  C K++G+ GFKC+CG+ F
Sbjct: 77  EIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTF 136

Query: 129 CGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           CG+HRYPEKH CSFDFK+VGR+ IA+ANPL+KA+K+++I
Sbjct: 137 CGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  147 bits (371), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/166 (47%), Positives = 101/166 (60%), Gaps = 15/166 (9%)

Query: 2   AEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASP 61
           AEE      E   LC NNCGFFGS  T N+CSKCYRD      +  ++ T VE    AS 
Sbjct: 10  AEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVEKKPLAS- 64

Query: 62  PSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGFK 121
             SS P +  V D  + ++        AD   V+E+   +PP  NRC  CRK++GLTGFK
Sbjct: 65  -LSSTPLVTEVTDGGSGSV--------ADGKQVMEEDTPKPPS-NRCLSCRKKVGLTGFK 114

Query: 122 CRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           CRCG  FC  HRY + H C+FD+K+VGRE+IA+ NPL+KA+K+ KI
Sbjct: 115 CRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1

 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 104/169 (61%), Gaps = 13/169 (7%)

Query: 8   QAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSA-------- 59
           Q  EG  LC NNCGFFGS ATMN+CSKC+++  +KE+Q     +++++ ++         
Sbjct: 9   QQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHI 68

Query: 60  -SPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLT 118
            +   S+A  +  V     +  P        +VAVV + ++     PNRC+ CRKR+GLT
Sbjct: 69  VAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEG----PNRCATCRKRVGLT 124

Query: 119 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           GF CRCG ++C  HRY +KH C FD++   R+ IA+ANP++KAEKL+KI
Sbjct: 125 GFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 8   QAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAP 67
           Q  EG  LC NNCGFFGS ATMN+CSKC+++  +K Q+QA +  +  +S+     S   P
Sbjct: 9   QQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMK-QEQAKLAASSIDSIVNGGDSGKEP 67

Query: 68  FLGSVPDPPALALPEVNG--DKDADVAVVLEQQQQQPPQ---PNRCSVCRKRIGLTGFKC 122
            +    +  A+A  EV     + A++A   E     P     PNRCS CRKR+GLTGF C
Sbjct: 68  IIAGHAEV-AVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNC 126

Query: 123 RCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           RCG ++C  HRY +KH C FD++   R+ IA+ANP++KAEKL+KI
Sbjct: 127 RCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 8   QAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPSSSAP 67
           Q  EG  LC NNCGFFGS ATMN+CSKC+++  +K Q+QA +  +  +S+     S   P
Sbjct: 9   QQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMK-QEQAKLAASSIDSIVNGGDSGKEP 67

Query: 68  FLGSVPDPPALALPEVNG--DKDADVAVVLEQQQQQPPQ---PNRCSVCRKRIGLTGFKC 122
            +    +  A+A  EV     + A++A   E     P     PNRCS CRKR+GLTGF C
Sbjct: 68  IIAGHAEV-AVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNC 126

Query: 123 RCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           RCG ++C  HRY +KH C FD++   R+ IA+ANP++KAEKL+KI
Sbjct: 127 RCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 94/166 (56%), Gaps = 17/166 (10%)

Query: 4   EHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSASPPS 63
           E      E   LC NNCGFFGS+ T N+CSKCYRD        A +   VE        S
Sbjct: 11  EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPV---VEKKAFTPASS 67

Query: 64  SSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQP--NRCSVCRKRIGLTGFK 121
           S  P   + PD    A            AV  +Q  Q+PP+P  NRC  CRK++GLTGF+
Sbjct: 68  SKTPLEPAKPDEVPAA------------AVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQ 115

Query: 122 CRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           CRCG  FC THRY E H C+FD+KK GR++IA+ NP++ AEK+ KI
Sbjct: 116 CRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
351723613	160	uncharacterized protein LOC100527251 [Gl	0.940	0.981	0.629	6e-51
18404102	161	zinc finger A20 and AN1 domain-containin	0.952	0.987	0.597	8e-51
356572542	164	PREDICTED: zinc finger A20 and AN1 domai	0.898	0.914	0.591	5e-50
255575635	166	zinc finger protein, putative [Ricinus c	0.970	0.975	0.608	5e-50
225440928	161	PREDICTED: zinc finger A20 and AN1 domai	0.964	1.0	0.610	2e-49
449451130	173	PREDICTED: zinc finger A20 and AN1 domai	1.0	0.965	0.624	3e-49
357511009	168	Zinc finger A20 and AN1 domain-containin	0.952	0.946	0.579	7e-48
297823437	161	hypothetical protein ARALYDRAFT_902745 [	0.952	0.987	0.609	3e-47
356548411	172	PREDICTED: zinc finger A20 and AN1 domai	0.976	0.947	0.579	7e-47
193237563	165	transcription factor C2H2 [Lotus japonic	0.988	1.0	0.592	2e-46

>gi|351723613|ref|NP_001237029.1| uncharacterized protein LOC100527251 [Glycine max] gi|255631880|gb|ACU16307.1| unknown [Glycine max]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 107/170 (62%), Positives = 121/170 (71%), Gaps = 13/170 (7%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR QA EGHRL +NNCGFFGS ATMNLCSKCYRD  LKE++QA  K+T+E +LS S
Sbjct: 1   MAEEHRCQAPEGHRLRSNNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSGS 60

Query: 61  PPSSSAPFLGSVPD---PPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGL 117
             SS+   + S  D    P  +LP+ +     DVA         P Q NRC  CRKR+GL
Sbjct: 61  --SSATVAVASAVDSLPAPVESLPQPSVVSSPDVAA--------PVQANRCGACRKRVGL 110

Query: 118 TGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           TGFKCRCGT FCGTHRYPEKH C FDFK VGREEIARANP+IK EKL +I
Sbjct: 111 TGFKCRCGTTFCGTHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404102|ref|NP_565844.1| zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Arabidopsis thaliana] gi|73921295|sp|Q9SJM6.1|SAP4_ARATH RecName: Full=Zinc finger A20 and AN1 domain-containing stress-associated protein 4; Short=AtSAP4 gi|4510345|gb|AAD21434.1| expressed protein [Arabidopsis thaliana] gi|21592464|gb|AAM64415.1| zinc finger-like protein [Arabidopsis thaliana] gi|114050557|gb|ABI49428.1| At2g36320 [Arabidopsis thaliana] gi|330254138|gb|AEC09232.1| zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Arabidopsis thaliana]

 Score =  204 bits (520), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 122/169 (72%), Gaps = 10/169 (5%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +  EGHRLC NNCGFFGS+ATMNLCS CY D CLK+QQQAS+K+TVE+SLS  
Sbjct: 1   MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS-- 58

Query: 61  PPSSSAPFLGSVPDPPA--LALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLT 118
                 P +  V +  A  L +P     ++     +  +Q   P +PNRC+VCRKR+GLT
Sbjct: 59  ------PVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLT 112

Query: 119 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           GF CRCGT FCG+HRYPE HGC+FDFK  GREEIA+ANPL+ A KL+KI
Sbjct: 113 GFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572542|ref|XP_003554427.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Glycine max]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 121/181 (66%), Gaps = 31/181 (17%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR QA EGHRLC+NNCGFFGS ATMNLCSKCYRD  LKE++QA  K+T+E +LS S
Sbjct: 1   MAEEHRCQAPEGHRLCSNNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSGS 60

Query: 61  PP--------------SSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPN 106
                           S SAP + S+P PP L  P++                  P Q N
Sbjct: 61  SSATVTATAVVASSVESPSAP-VESLPQPPVLISPDIAA----------------PVQAN 103

Query: 107 RCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEK 166
           RC  CRKR+GLTGFKCRCGT FCG+HRYPEKH C FDFK VGREEIARANP+IK EKL +
Sbjct: 104 RCGACRKRVGLTGFKCRCGTTFCGSHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRR 163

Query: 167 I 167
           I
Sbjct: 164 I 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575635|ref|XP_002528717.1| zinc finger protein, putative [Ricinus communis] gi|223531811|gb|EEF33629.1| zinc finger protein, putative [Ricinus communis]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 124/171 (72%), Gaps = 9/171 (5%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +A EGHR C NNCGFFGS ATMNLCSKCYRD+CLKEQ Q   + +++ SLS  
Sbjct: 1   MAEEHRCEAPEGHRPCVNNCGFFGSAATMNLCSKCYRDYCLKEQHQHQQEASIKASLSVP 60

Query: 61  PPSSSAPFL-GSVPDPP---ALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIG 116
            PSS+A  +  S P P     L  PE   ++   V   +EQ+Q     PNRC VCRKR+G
Sbjct: 61  SPSSAAAIVDNSQPAPSPDDVLRSPEAVEEEVKVVVTAIEQKQ-----PNRCFVCRKRVG 115

Query: 117 LTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           LTGF+CRC ++FCG HRYPEKH C+FDFKK+GREEIARANPL+ A+KL KI
Sbjct: 116 LTGFRCRCESMFCGAHRYPEKHNCTFDFKKIGREEIARANPLVVAQKLHKI 166

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440928|ref|XP_002282913.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4 isoform 1 [Vitis vinifera]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/167 (61%), Positives = 121/167 (72%), Gaps = 6/167 (3%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +A EGHRLCANNCGFFGS AT+NLCSKCYRD  LKE+Q +S K+ VE SLSA+
Sbjct: 1   MAEEHRCEAPEGHRLCANNCGFFGSPATLNLCSKCYRDLRLKEEQASSAKSAVEKSLSAA 60

Query: 61  PPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGF 120
             S++         PPAL LPE   +     AV          QPNRCS CRKR+GLTGF
Sbjct: 61  SSSTAPL------SPPALTLPEAANEITVPAAVTAAVPSPSATQPNRCSTCRKRVGLTGF 114

Query: 121 KCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           +CRCG  FCG HRYPE+HGC+FDFK +G+E I++ANP++KAEKL KI
Sbjct: 115 RCRCGITFCGVHRYPEQHGCTFDFKTLGKEAISKANPVVKAEKLHKI 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451130|ref|XP_004143315.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like isoform 1 [Cucumis sativus] gi|449451132|ref|XP_004143316.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like isoform 2 [Cucumis sativus] gi|449451134|ref|XP_004143317.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like isoform 3 [Cucumis sativus]

 Score =  199 bits (506), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 125/173 (72%), Gaps = 6/173 (3%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR QA EGHRLCANNCGFFGS ATM+LCSKCYRD  LKEQ+QAS K+T+E +LSAS
Sbjct: 1   MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDFRLKEQEQASTKSTIEAALSAS 60

Query: 61  PPSSSAPFLGSVPDPPALA---LPEVNGDKDADVAVVLEQQQQQP---PQPNRCSVCRKR 114
              S +      P  P +    LP+   D       V+      P   P PNRCS CRK+
Sbjct: 61  SSPSPSSSPIDPPPVPPVVALSLPDTTTDLTIPPLAVVGSDVTNPNPSPSPNRCSSCRKK 120

Query: 115 IGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           +GLTGFKCRCGT FCG HRYPEKHGC+FDFK +GREEIARANP++KA+KLE+I
Sbjct: 121 VGLTGFKCRCGTTFCGAHRYPEKHGCTFDFKSIGREEIARANPVVKADKLERI 173

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511009|ref|XP_003625793.1| Zinc finger A20 and AN1 domain-containing stress-associated protein [Medicago truncatula] gi|355500808|gb|AES82011.1| Zinc finger A20 and AN1 domain-containing stress-associated protein [Medicago truncatula] gi|388504200|gb|AFK40166.1| unknown [Medicago truncatula]

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 102/176 (57%), Positives = 122/176 (69%), Gaps = 17/176 (9%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +  EGHRLCANNCGFFGS+ATMNLCSKCYRD  LKEQ+QA  K+T+E +LS++
Sbjct: 1   MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSA 60

Query: 61  PPSSSAPFLGSV---------PDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVC 111
             S++     S          P PPAL +P +  +   + +         P Q NRC  C
Sbjct: 61  SASTAVVVAASPVAEIESLPQPQPPALTVPSIVPEASDNSS--------GPVQSNRCGTC 112

Query: 112 RKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           RKR GLTGFKCRCG  FCG+HRYPEKH C FDFK VGREEIA+ANP+IKA+KL +I
Sbjct: 113 RKRTGLTGFKCRCGITFCGSHRYPEKHECGFDFKAVGREEIAKANPVIKADKLRRI 168

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823437|ref|XP_002879601.1| hypothetical protein ARALYDRAFT_902745 [Arabidopsis lyrata subsp. lyrata] gi|297325440|gb|EFH55860.1| hypothetical protein ARALYDRAFT_902745 [Arabidopsis lyrata subsp. lyrata]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/169 (60%), Positives = 121/169 (71%), Gaps = 10/169 (5%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +  EGHRLC NNCGFFGS+ATMNLCS CY D CLK+QQQASIK+TVE      
Sbjct: 1   MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASIKSTVE------ 54

Query: 61  PPSSSAPFLGSVPDPPA--LALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLT 118
             SS +P +  V +  A  L +P    ++   V    EQ    P +PNRC+VCRKR+GLT
Sbjct: 55  --SSRSPVIAPVLENYAAELEIPTTKTEEKKPVQNPTEQPPPPPQRPNRCTVCRKRVGLT 112

Query: 119 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           GF CRCGT FCG+HRYPE HGC+FDFK  GREEIA+ANPL+ A KL+KI
Sbjct: 113 GFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548411|ref|XP_003542595.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like isoform 1 [Glycine max] gi|356548413|ref|XP_003542596.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like isoform 2 [Glycine max]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/176 (57%), Positives = 118/176 (67%), Gaps = 13/176 (7%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLS-- 58
           MAEEHR +  EGH LCANNCGF GSTATMNLCSKCY    LKEQ++AS K+T+E +LS  
Sbjct: 1   MAEEHRCETPEGHLLCANNCGFSGSTATMNLCSKCYGAIRLKEQEEASTKSTIETALSSS 60

Query: 59  -------ASPPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVC 111
                   SPP+     + S   PP+LA  EV      + +  +        QPNRC+ C
Sbjct: 61  SLKPSFSTSPPTLVDVLIES--PPPSLA--EVAVTVAVEASSSISTSSGSVAQPNRCATC 116

Query: 112 RKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           RKR+GLTGFKCRCG  FCG HRY EKH C FDFK VGREEIARANP+IKAEKL +I
Sbjct: 117 RKRVGLTGFKCRCGLTFCGAHRYSEKHACGFDFKTVGREEIARANPVIKAEKLRRI 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193237563|dbj|BAG50058.1| transcription factor C2H2 [Lotus japonicus]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 119/167 (71%), Gaps = 2/167 (1%)

Query: 1   MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           MAEEHR +A EGHRLC NNCGF GS ATM+LCSKCYRD  LKEQQ+AS K+T+E +LS+S
Sbjct: 1   MAEEHRCEAPEGHRLCVNNCGFSGSPATMDLCSKCYRDIRLKEQQEASTKSTIETALSSS 60

Query: 61  PPSSSAPFLGSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGF 120
             S + P   +    PA+ L      + A +++       Q  QPNRC+ CRKR+GLTGF
Sbjct: 61  S-SVAKPPSSTSSPSPAVDLAPPAKAETASISLTA-GPILQAAQPNRCATCRKRVGLTGF 118

Query: 121 KCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
           KCRC   FCG HRYPEKH CSFDFK VGRE IAR NP+++AEKL +I
Sbjct: 119 KCRCEVTFCGAHRYPEKHACSFDFKTVGREAIARENPVVRAEKLRRI 165

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2083208	170	AT3G52800 [Arabidopsis thalian	1.0	0.982	0.576	7.7e-48
TAIR|locus:2049505	161	AT2G36320 [Arabidopsis thalian	0.964	1.0	0.550	3e-46
TAIR|locus:2042011	163	AT2G27580 [Arabidopsis thalian	0.976	1.0	0.485	5.3e-40
TAIR|locus:2118036	175	SAP7 "stress-associated protei	0.371	0.354	0.661	1.3e-34
TAIR|locus:2034650	168	AT1G12440 [Arabidopsis thalian	0.365	0.363	0.655	4.4e-34
TAIR|locus:2008251	173	AT1G51200 [Arabidopsis thalian	0.934	0.901	0.432	9.5e-34
TAIR|locus:2132649	176	AT4G22820 [Arabidopsis thalian	0.910	0.863	0.440	6.7e-33
TAIR|locus:2101217	160	SAP5 "stress associated protei	0.371	0.387	0.612	3.6e-27
UNIPROTKB|F1NJD4	212	ZFAND5 "Uncharacterized protei	0.371	0.292	0.532	7.4e-27
UNIPROTKB|A7MBA8	213	ZFAND5 "ZFAND5 protein" [Bos t	0.371	0.291	0.532	1.2e-26

TAIR|locus:2083208 AT3G52800 [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 98/170 (57%), Positives = 114/170 (67%)

Query:     1 MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQAS-IKTTVENXXXX 59
             MAEEHR Q  E +RLC NNCGF GS+ATMNLCS CY D CLK+QQQ+S IK+TVE+    
Sbjct:     1 MAEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSV 60

Query:    60 XXXXXXXXFLGSVPDPPALALPEVNGDKDADVAVV-LEXXXXXXXXX-NRCSVCRKRIGL 117
                      + S   PP L  P V  +     AV+ L           NRC+ CRKR+GL
Sbjct:    61 SPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGL 120

Query:   118 TGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
             TGFKCRCGT+FCG HRYPE HGCS+DFK  GREEIA+ANPL+KA KL+KI
Sbjct:   121 TGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2049505 AT2G36320 [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 92/167 (55%), Positives = 110/167 (65%)

Query:     1 MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENXXXXX 60
             MAEEHR +  EGHRLC NNCGFFGS+ATMNLCS CY D CLK+QQQAS+K+TVE+     
Sbjct:     1 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPV 60

Query:    61 XXXXXXXFLGSVPDPPALALPEVNGDKDADVAVVLEXXXXXXXXXNRCSVCRKRIGLTGF 120
                    +         L +P     ++     +           NRC+VCRKR+GLTGF
Sbjct:    61 IAPVLENYAAE------LEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTGF 114

Query:   121 KCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
              CRCGT FCG+HRYPE HGC+FDFK  GREEIA+ANPL+ A KL+KI
Sbjct:   115 MCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2042011 AT2G27580 [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 81/167 (48%), Positives = 104/167 (62%)

Query:     1 MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENXXXXX 60
             MAEEHR Q     RLCANNCGFFGSTAT NLCSKC+RD   +EQ  ++ K  +       
Sbjct:     1 MAEEHRLQEP---RLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAV 57

Query:    61 XXXXXXXFLGSVPDPPALALPEVNGDKDADVAVVLEXXXXXXXXXNRCSVCRKRIGLTGF 120
                     +   P PPA +   V    +   A   E          RC  CR+R+G+TGF
Sbjct:    58 GAAASSS-VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGF 116

Query:   121 KCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
             +CRCG +FCGTHRY E+H CSFDFK++G+++IA+ANP++KA+KLEKI
Sbjct:   117 RCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2118036 SAP7 "stress-associated protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 41/62 (66%), Positives = 55/62 (88%)

Query:   106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLE 165
             NRC  C K++G+ GFKC+CG+ FCG+HRYPEKH CSFDFK+VGR+ IA+ANPL+KA+K++
Sbjct:   114 NRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

Query:   166 KI 167
             +I
Sbjct:   174 RI 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2034650 AT1G12440 [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
 Identities = 40/61 (65%), Positives = 51/61 (83%)

Query:   107 RCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEK 166
             RC  C K++G+TGFKCRCG+ FCGTHRYPE H C FDFK V RE IA+ANP++KA+K+++
Sbjct:   108 RCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDR 167

Query:   167 I 167
             I
Sbjct:   168 I 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2008251 AT1G51200 [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/162 (43%), Positives = 97/162 (59%)

Query:    11 EGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENXXXXXXXXXXXXFLG 70
             EG +LC NNCGFFGS ATMN+CSKC++D   +++Q A   + V              F  
Sbjct:    13 EGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKET-FTA 71

Query:    71 SVPDPPALAL-PEVNGDKDADVAVVLEXXXXXXXXX----NRCSVCRKRIGLTGFKCRCG 125
             ++ D    ++ P     + + V VV E             +RC+ C KR+GLTGFKCRCG
Sbjct:    72 ALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCG 131

Query:   126 TIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 167
             ++FCGTHRY + H CSF++    +E IA+ANP++KAEKL+KI
Sbjct:   132 SLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007067 "mitosis" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2132649 AT4G22820 [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 74/168 (44%), Positives = 96/168 (57%)

Query:     8 QAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENXXXXXXXXXXXX 67
             QA E  +LC   CGFFGS + M+LCSKCYR  C +E Q A  K  VE             
Sbjct:    15 QASEP-KLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLF- 72

Query:    68 FLGSVPDPPALALPEVNGDKDADVAVVLEXXXXXX---------XXXNRCSVCRKRIGLT 118
                 + +PPA+ + E   +K A V V  E                  NRC  C K++G+ 
Sbjct:    73 ----IAEPPAVVV-EPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIM 127

Query:   119 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEK 166
             GFKC+CG+ FCG HRYPE H CSFDFK+VGR EIA+ANP++KA+K+++
Sbjct:   128 GFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2101217 SAP5 "stress associated protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 38/62 (61%), Positives = 50/62 (80%)

Query:   106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLE 165
             NRCS CRK++GLTGF+CRCG +FC  HRY ++H CS+D+K  GRE IAR NP++KA K+ 
Sbjct:    99 NRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMV 158

Query:   166 KI 167
             K+
Sbjct:   159 KV 160

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0051865 "protein autoubiquitination" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

UNIPROTKB|F1NJD4 ZFAND5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 218 (81.8 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:   106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLE 165
             NRC +CRK++GLTGF CRCG +FCG HRY +KH C +D+K     +I + NP++ AEK++
Sbjct:   151 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 210

Query:   166 KI 167
             +I
Sbjct:   211 RI 212

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0060324 "face development" evidence=IEA

UNIPROTKB|A7MBA8 ZFAND5 "ZFAND5 protein" [Bos taurus (taxid:9913)]

 Score = 218 (81.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:   106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLE 165
             NRC +CRK++GLTGF CRCG +FCG HRY +KH C +D+K     +I + NP++ AEK++
Sbjct:   152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQ 211

Query:   166 KI 167
             +I
Sbjct:   212 RI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q852K5	SAP6_ORYSJ	No assigned EC number	0.4759	0.9041	0.9437	yes	no
Q9SJM6	SAP4_ARATH	No assigned EC number	0.5976	0.9520	0.9875	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT2G36320	zinc finger (AN1-like) family protein; zinc finger (AN1-like) family protein; FUNCTIONS IN- DNA binding, zinc ion binding; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Zinc finger, AN1-type (InterPro-IPR000058), Zinc finger, A20-type (InterPro-IPR002653); BEST Arabidopsis thaliana protein match is- zinc finger (AN1-like) family protein (TAIR-AT3G52800.1); Has 766 Blast hits to 751 proteins in 109 species- Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - [...] (161 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G06260	nucleolar protein-related; nucleolar protein-related; FUNCTIONS IN- calcium ion binding; INVOLV [...] (424 aa)							•		0.716
	AT2G45380	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (494 aa)							•		0.716
	AT2G42350	zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (217 aa)							•		0.716
	AT1G11020	zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (321 aa)							•		0.716
	AT1G04850	ubiquitin-associated (UBA)/TS-N domain-containing protein; ubiquitin-associated (UBA)/TS-N doma [...] (413 aa)							•		0.677
	AT5G17850	cation exchanger, putative (CAX8); cation exchanger, putative (CAX8); FUNCTIONS IN- cation-cati [...] (559 aa)							•		0.675
	AT1G65820	microsomal glutathione s-transferase, putative; microsomal glutathione s-transferase, putative; [...] (194 aa)							•		0.659
	AT2G48020	sugar transporter, putative; sugar transporter, putative; FUNCTIONS IN- carbohydrate transmembr [...] (463 aa)							•		0.657
	AT2G16360	40S ribosomal protein S25 (RPS25A); 40S ribosomal protein S25 (RPS25A); FUNCTIONS IN- structura [...] (125 aa)							•		0.649
	AT2G47830	cation efflux family protein / metal tolerance protein, putative (MTPc1); cation efflux family [...] (471 aa)							•		0.599

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	167
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	6e-13
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	7e-09
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	4e-07
smart00259	26	smart00259, ZnF_A20, A20-like zinc fingers	0.001

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 59.3 bits (144), Expect = 6e-13
 Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 108 CSVCRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFK 145
           C  CRK++GLTGFKCR CG +FCG HR PE H C  D+K
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 49.0 bits (117), Expect = 7e-09
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 108 CSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFKK 146
           CS   C+K+  L  FKCR CG  FC  HR PE H C   +K 
Sbjct: 1   CSFKGCKKKDFL-PFKCRFCGGTFCLKHRLPEDHNCPGLYKS 41

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 15/23 (65%), Positives = 16/23 (69%)

Query: 15 LCANNCGFFGSTATMNLCSKCYR 37
           C   CGF+GS AT  LCSKCYR
Sbjct: 3  KCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|128555 smart00259, ZnF_A20, A20-like zinc fingers

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 17 ANNCGFFGSTATMNLCSKCYR 37
             CGFFG+ AT  LCSKC++
Sbjct: 6  RPGCGFFGNPATEGLCSKCFK 26

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.55
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.5
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.49
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.06
KOG3183	250	consensus Predicted Zn-finger protein [General fun	97.24
COG3582	162	Predicted nucleic acid binding protein containing	96.78
KOG3183	250	consensus Predicted Zn-finger protein [General fun	93.74
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	92.34
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	91.83
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	91.33
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.46
KOG1818	634	consensus Membrane trafficking and cell signaling	86.46

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=4e-46  Score=300.10  Aligned_cols=163  Identities=48%  Similarity=0.873  Sum_probs=108.8

Q ss_pred             Cchhhhcccc--ccccchhccCCCCCccccCCcchhhhHHHHHHHhhh-hhcchhhccccCCCCCCCCCCCCCCCCCCCC
Q 031015            1 MAEEHRFQAQ--EGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQ-ASIKTTVENSLSASPPSSSAPFLGSVPDPPA   77 (167)
Q Consensus         1 M~~e~~~q~p--~~p~lC~ngCGFFGs~aT~nlCSkCyr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (167)
                      |++++....+  +.+.||.|||||||+|+|+||||+||++++.++++. ...+..+...++.+...   +..........
T Consensus         1 M~~e~~~~~~~~~~~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~~~~~~~~   77 (167)
T KOG3173|consen    1 MASETNGSQTPPSQDLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLSSPRSV---PSRDPPAVSLE   77 (167)
T ss_pred             CcccccCCCCCCccccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCcccccccCcccc---Ccccccccccc
Confidence            6655543332  235899999999999999999999999999887765 33332222111100000   10000000000


Q ss_pred             CCCCCcCCC-CCcchhhhhhhccCCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHHHHHhC
Q 031015           78 LALPEVNGD-KDADVAVVLEQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARAN  156 (167)
Q Consensus        78 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i~k~N  156 (167)
                      ..... +.. ..........+.......++||..|+|+|||+||.||||++||+.|||||.|+|+||||.+||+.|+++|
T Consensus        78 ~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~i~k~n  156 (167)
T KOG3173|consen   78 STTES-ELKLVSDTPSTEEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREKIAKAN  156 (167)
T ss_pred             ccccc-cccccccCCcccccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHHHHHhC
Confidence            00000 000 0000001112223445667899999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccccC
Q 031015          157 PLIKAEKLEKI  167 (167)
Q Consensus       157 p~v~~~K~~kI  167 (167)
                      |+|+++||+||
T Consensus       157 P~v~a~k~~ki  167 (167)
T KOG3173|consen  157 PVVKADKLQKI  167 (167)
T ss_pred             CeeeccccccC
Confidence            99999999998

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.55  E-value=1.6e-15  Score=87.92  Aligned_cols=25  Identities=72%  Similarity=1.436  Sum_probs=20.7

Q ss_pred             ccchhccCCCCCccccCCcchhhhH
Q 031015           13 HRLCANNCGFFGSTATMNLCSKCYR   37 (167)
Q Consensus        13 p~lC~ngCGFFGs~aT~nlCSkCyr   37 (167)
                      |.+|++|||||||++|+||||||||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            4699999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.50  E-value=6.9e-15  Score=93.06  Aligned_cols=38  Identities=66%  Similarity=1.552  Sum_probs=36.6

Q ss_pred             cchhhhcccccccccc-cCcccccCCCCCCCCCCcchhh
Q 031015          108 CSVCRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFK  145 (167)
Q Consensus       108 C~~C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk  145 (167)
                      |+.|+++++|++|+|+ |+++||..|||||.|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7889999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.49  E-value=5.4e-15  Score=86.43  Aligned_cols=25  Identities=52%  Similarity=1.172  Sum_probs=23.3

Q ss_pred             ccchh-ccCCCCCccccCCcchhhhH
Q 031015           13 HRLCA-NNCGFFGSTATMNLCSKCYR   37 (167)
Q Consensus        13 p~lC~-ngCGFFGs~aT~nlCSkCyr   37 (167)
                      |.+|+ +||||||||+|+||||||||
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            35899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.06  E-value=3.7e-11  Score=76.94  Aligned_cols=38  Identities=53%  Similarity=1.017  Sum_probs=27.9

Q ss_pred             cch--hhhcccccccccc-cCcccccCCCCCCCCCCcchhhH
Q 031015          108 CSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFKK  146 (167)
Q Consensus       108 C~~--C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk~  146 (167)
                      |+.  |++++. ++|.|+ |+..||..|||||.|+|+.+++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            444  999886 899999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=97.24  E-value=9.7e-05  Score=63.33  Aligned_cols=40  Identities=38%  Similarity=0.897  Sum_probs=36.4

Q ss_pred             CCCcc--hhhhcccccccccc-cCcccccCCCCCCCCCCcchhh
Q 031015          105 PNRCS--VCRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFK  145 (167)
Q Consensus       105 ~~rC~--~C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk  145 (167)
                      -.+|+  .|+. +..++|+|- |+.+||..||.-+.|+|.+-|.
T Consensus         8 GkHCs~~~Ckq-lDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~   50 (250)
T KOG3183|consen    8 GKHCSVPYCKQ-LDFLPFKCDGCSGIFCLEHRSYESHHCPKGLR   50 (250)
T ss_pred             ccccCcchhhh-ccccceeeCCccchhhhccchHhhcCCCcccc
Confidence            35888  8988 889999999 9999999999999999998876

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.78  E-value=0.00066  Score=55.15  Aligned_cols=39  Identities=33%  Similarity=0.605  Sum_probs=30.3

Q ss_pred             Ccchhhhcc--cccccccc-cCcccccCCCCCCCCCCcchhh
Q 031015          107 RCSVCRKRI--GLTGFKCR-CGTIFCGTHRYPEKHGCSFDFK  145 (167)
Q Consensus       107 rC~~C~kk~--~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk  145 (167)
                      +|..|...+  +-+.++|. |++.||+.||+++.|+|.+...
T Consensus        96 ~~a~~~~~g~~s~l~~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          96 RCATPQCTGKGSTLAGKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             eeecceeccCCccccccccCCCCcceeceecccccccccHHH
Confidence            555333333  24579999 9999999999999999998854

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=93.74  E-value=0.02  Score=49.38  Aligned_cols=42  Identities=36%  Similarity=0.844  Sum_probs=35.1

Q ss_pred             CCCCCCCcc--hhhhccccc-ccccc-cCcccccCCCCCCCCCCcc
Q 031015          101 QPPQPNRCS--VCRKRIGLT-GFKCR-CGTIFCGTHRYPEKHGCSF  142 (167)
Q Consensus       101 ~~~~~~rC~--~C~kk~~l~-~f~Cr-Cg~~FC~~HR~~e~H~C~~  142 (167)
                      .+...++|.  .|++++-+. .+.|+ |+..||-+||++-.|.|.-
T Consensus        94 ~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~~  139 (250)
T KOG3183|consen   94 RKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCNK  139 (250)
T ss_pred             cccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhhh
Confidence            345567787  799988664 59999 9999999999999999983

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.34  E-value=0.054  Score=36.70  Aligned_cols=29  Identities=31%  Similarity=0.953  Sum_probs=17.8

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ...|..|+++.+++  -..|| ||.+||+.+-
T Consensus         9 ~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~Cs   40 (69)
T PF01363_consen    9 ASNCMICGKKFSLFRRRHHCRNCGRVVCSSCS   40 (69)
T ss_dssp             -SB-TTT--B-BSSS-EEE-TTT--EEECCCS
T ss_pred             CCcCcCcCCcCCCceeeEccCCCCCEECCchh
Confidence            57999999999987  49999 9999997654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=91.83  E-value=0.076  Score=34.51  Aligned_cols=28  Identities=43%  Similarity=0.973  Sum_probs=24.2

Q ss_pred             CCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          106 NRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       106 ~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ..|..|.++.+++  ...|+ ||.+||+.+-
T Consensus         3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C~   33 (57)
T cd00065           3 SSCMGCGKPFTLTRRRHHCRNCGRIFCSKCS   33 (57)
T ss_pred             CcCcccCccccCCccccccCcCcCCcChHHc
Confidence            5799999999996  69999 9999998553

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=91.33  E-value=0.11  Score=35.09  Aligned_cols=29  Identities=41%  Similarity=0.957  Sum_probs=24.7

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ...|..|.+..+++  ...|| ||.+||+.+-
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C~   41 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKCS   41 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHHc
Confidence            46899999999986  58899 9999997654

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.46  E-value=0.17  Score=29.33  Aligned_cols=23  Identities=26%  Similarity=0.655  Sum_probs=20.6

Q ss_pred             CCcchhhhcccccccccc-cCccc
Q 031015          106 NRCSVCRKRIGLTGFKCR-CGTIF  128 (167)
Q Consensus       106 ~rC~~C~kk~~l~~f~Cr-Cg~~F  128 (167)
                      ++|-.|++.|.+..-.|. ||+.|
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCCCC
Confidence            378999999999999999 99888

Several members are annotated as putative helicases.

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.46  E-value=0.27  Score=47.55  Aligned_cols=47  Identities=32%  Similarity=0.766  Sum_probs=36.3

Q ss_pred             CCCCCcchhhhcccccc--cccc-cCcccccCCC-----------CCCCCCCcchhhHhhH
Q 031015          103 PQPNRCSVCRKRIGLTG--FKCR-CGTIFCGTHR-----------YPEKHGCSFDFKKVGR  149 (167)
Q Consensus       103 ~~~~rC~~C~kk~~l~~--f~Cr-Cg~~FC~~HR-----------~~e~H~C~~dyk~~~r  149 (167)
                      .....|..|+.+.|+++  ..|| ||.+||+.|-           |-+---|..+|...-|
T Consensus       163 ~D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l~~  223 (634)
T KOG1818|consen  163 IDSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELLTR  223 (634)
T ss_pred             ccccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHhhh
Confidence            34579999999999984  8999 9999999884           3455667777764433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		3e-16
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		1e-13
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		4e-13
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		3e-12
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		5e-11

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVG 148
           NRC+VCRKR+GLTGF CRCGT FCG+HRYPE HGC+FDFK  G
Sbjct: 16  NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAG 58

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVG 148
           NRC  C K++G+ GFKC+CG+ FCG+HRYPEKH CSFDFK+VG
Sbjct: 16  NRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVG 58

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKV 147
            RC  C K++G+TGFKCRCG+ FCGTHRYPE H C FDFK V
Sbjct: 26  TRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGV 67

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 106 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFK 145
           NRC +CRK++GLTGF CRCG +FCG HRY +KH C +D+K
Sbjct: 26  NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYK 65

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 108 CSVCRKRIGL-TGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPL 158
           C +C K+ GL T F+CRCG  FC +HRY E HGC++D+K  GR  +  ANP+
Sbjct: 28  CFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	3e-28
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	4e-26
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	3e-25
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	4e-25
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	2e-23
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	2e-21
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	4e-15
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	9e-15
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-05
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	5e-04

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score = 99.6 bits (248), Expect = 3e-28
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 70  GSVPDPPALALPEVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGL-TGFKCRCGTIF 128
           GS        LP V               Q +      C +C K+ GL T F+CRCG  F
Sbjct: 1   GSSGSSGIHHLPPVK-----------APLQTKKKIMKHCFLCGKKTGLATSFECRCGNNF 49

Query: 129 CGTHRYPEKHGCSFDFKKVGREEIARANPLIKA 161
           C +HRY E HGC++D+K  GR  +  ANP+   
Sbjct: 50  CASHRYAEAHGCNYDYKSAGRRYLEEANPVSGP 82

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 93.3 bits (232), Expect = 4e-26
 Identities = 37/58 (63%), Positives = 43/58 (74%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIA 153
             Q   P +PNRC+VCRKR+GLTGF CRCGT FCG+HRYPE HGC+FDFK  G    +
Sbjct: 6   SGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 91.0 bits (226), Expect = 3e-25
 Identities = 30/58 (51%), Positives = 39/58 (67%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIA 153
               +     NRC  C K++G+ GFKC+CG+ FCG+HRYPEKH CSFDFK+VG    +
Sbjct: 6   SGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPSS 63

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 91.2 bits (226), Expect = 4e-25
 Identities = 29/58 (50%), Positives = 34/58 (58%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIA 153
                      RC  C K++G+TGFKCRCG+ FCGTHRYPE H C FDFK V     +
Sbjct: 16  APLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPSS 73

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 86.5 bits (214), Expect = 2e-23
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR 149
           +  +   P+ NRC +CRK++GLTGF CRCG +FCG HRY +KH C +D+K    
Sbjct: 16  KAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS 69

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 81.6 bits (201), Expect = 2e-21
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFK---CRCGTIFCGTHRYPEKHGCSFDFKKVGREEI 152
              + +     RC  C+ ++ L   +   CRCG +FC  HR PE+H C+FD    G    
Sbjct: 6   SGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65

Query: 153 A 153
           +
Sbjct: 66  S 66

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 65.1 bits (158), Expect = 4e-15
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 1  MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
          MA+E       G  LC+  CGF+G+  T  +CS CY++H  ++Q    +      S S S
Sbjct: 3  MAQET--NQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNS 60

Query: 61 P 61
          P
Sbjct: 61 P 61

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 64.5 bits (156), Expect = 9e-15
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 1  MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQASIKTTVENSLSAS 60
           +E       +   LC   CG++G+ A    CSKC+R+   K +Q+   +          
Sbjct: 4  KSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQR 63

Query: 61 PPSSSAP 67
              +  
Sbjct: 64 EEEEAFA 70

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.5 bits (96), Expect = 2e-05
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 13/38 (34%)

Query: 43 EQQQASIKTTVENSLSASPPSSSAPFLGSVPDPPALAL 80
          E+Q  ++K  ++ SL      S+          PALA+
Sbjct: 18 EKQ--ALKK-LQASLKLYADDSA----------PALAI 42

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 98  QQQQPPQPNRCSVCR-KRIGLTGFKCR-CGTIFCGTHRYPEKHGCS 141
              +    N+C     ++  +    C  C   FC  HR+P  H CS
Sbjct: 5   SSGRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCS 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.95
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.91
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.91
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.89
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.89
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.88
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.8
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.74
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.59
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.31
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.27
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.21
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.8
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	92.35
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	92.03
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	91.07
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	90.33
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	89.93
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	89.88
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	88.92
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	88.73
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	88.31
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	86.02
2eqg_A	49	Tumor necrosis factor, alpha-induced protein 3; ZF	80.49

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.95  E-value=1.5e-29  Score=183.44  Aligned_cols=62  Identities=42%  Similarity=1.003  Sum_probs=59.0

Q ss_pred             CCCCCCCcchhhhccccc-ccccccCcccccCCCCCCCCCCcchhhHhhHHHHHHhCCccccc
Q 031015          101 QPPQPNRCSVCRKRIGLT-GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAE  162 (167)
Q Consensus       101 ~~~~~~rC~~C~kk~~l~-~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i~k~Np~v~~~  162 (167)
                      .+..++||+.|+|||+|+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            456689999999999996 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=2e-26  Score=159.13  Aligned_cols=54  Identities=67%  Similarity=1.459  Sum_probs=50.6

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIA  153 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i~  153 (167)
                      +++..++||+.|+|+|+|++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        10 ~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            456678999999999999999999999999999999999999999999998874

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=6.8e-26  Score=156.52  Aligned_cols=53  Identities=57%  Similarity=1.259  Sum_probs=49.6

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEI  152 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i  152 (167)
                      +++..++||+.|+++|+|++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        10 ~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           10 RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             CCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            44566899999999999999999999999999999999999999999999876

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.89  E-value=1e-24  Score=154.30  Aligned_cols=52  Identities=52%  Similarity=1.258  Sum_probs=48.1

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREE  151 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~  151 (167)
                      ..+..++||+.|+|||+|++|.||||++||+.|||+|.|+|+||||.+||++
T Consensus        20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            3455689999999999999999999999999999999999999999999864

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.89  E-value=7.1e-25  Score=155.15  Aligned_cols=53  Identities=55%  Similarity=1.210  Sum_probs=49.8

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEI  152 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i  152 (167)
                      +++..++||+.|+|+|+|++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        20 ~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           20 PPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             CTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             cCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            45667899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.88  E-value=7.1e-25  Score=152.65  Aligned_cols=53  Identities=36%  Similarity=0.819  Sum_probs=48.7

Q ss_pred             CCCCCCCCcchhhhcccccc---cccccCcccccCCCCCCCCCCcchhhHhhHHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTG---FKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEI  152 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~---f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i  152 (167)
                      ++++.++||+.|+|+|+|++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus        10 ~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A           10 SKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             CSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             cCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            44667899999999999994   999999999999999999999999999999765

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.80  E-value=1.9e-20  Score=128.41  Aligned_cols=45  Identities=38%  Similarity=0.899  Sum_probs=38.5

Q ss_pred             CchhhhccccccccchhccCCCCCccccCCcchhhhHHHHHHHhhhh
Q 031015            1 MAEEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKEQQQA   47 (167)
Q Consensus         1 M~~e~~~q~p~~p~lC~ngCGFFGs~aT~nlCSkCyr~~~~~~~~~~   47 (167)
                      |++++.  +|++|+||+|||||||||+|+||||||||+++++++++.
T Consensus         3 M~~e~~--~~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~   47 (62)
T 2kzy_A            3 MAQETN--QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG   47 (62)
T ss_dssp             CCCCCC--CCSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHC
T ss_pred             hhhccc--CCCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhccc
Confidence            786654  477889999999999999999999999999987666544

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.74  E-value=5e-19  Score=124.80  Aligned_cols=41  Identities=32%  Similarity=0.818  Sum_probs=26.9

Q ss_pred             hhhhccccccccchhccCCCCCccccCCcchhhhHHHHHHH
Q 031015            3 EEHRFQAQEGHRLCANNCGFFGSTATMNLCSKCYRDHCLKE   43 (167)
Q Consensus         3 ~e~~~q~p~~p~lC~ngCGFFGs~aT~nlCSkCyr~~~~~~   43 (167)
                      +.+++++|++|.||+|||||||||+|+||||||||+++++.
T Consensus         6 ~~~~~q~pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~   46 (74)
T 2c7n_A            6 ERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKA   46 (74)
T ss_dssp             ------------CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred             hhccCCCCCcchhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence            45667889999999999999999999999999999987543

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.59  E-value=3.2e-16  Score=102.43  Aligned_cols=28  Identities=21%  Similarity=0.706  Sum_probs=26.3

Q ss_pred             cchh-ccCCCCCccccCCcchhhhHHHHH
Q 031015           14 RLCA-NNCGFFGSTATMNLCSKCYRDHCL   41 (167)
Q Consensus        14 ~lC~-ngCGFFGs~aT~nlCSkCyr~~~~   41 (167)
                      .||+ |||||||||+|+|||||||||++.
T Consensus        19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           19 SKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             cccccCCCCCccCcccCCcchHHHHHHHH
Confidence            6999 999999999999999999999863

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.31  E-value=2.2e-13  Score=98.64  Aligned_cols=59  Identities=24%  Similarity=0.463  Sum_probs=49.4

Q ss_pred             CCCCCCCcch--hhhcccccccccc-cCcccccCCCCCCCCCCcchhhHhhHHHHHHhCCcccccccccC
Q 031015          101 QPPQPNRCSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI  167 (167)
Q Consensus       101 ~~~~~~rC~~--C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk~~~r~~i~k~Np~v~~~K~~kI  167 (167)
                      .+..++||+.  |+++ ++++|.|+ |+.+||..|||+|.|+|+..       .+.+.++...+.++.+|
T Consensus        21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~   82 (86)
T 1wfe_A           21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG   82 (86)
T ss_dssp             SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred             cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence            3456789998  9998 68999999 99999999999999999975       34677777777777665

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=1e-12  Score=90.32  Aligned_cols=42  Identities=36%  Similarity=0.786  Sum_probs=37.6

Q ss_pred             CCCCCCCCcch--hhhcccccccccc-cCcccccCCCCCCCCCCcc
Q 031015          100 QQPPQPNRCSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSF  142 (167)
Q Consensus       100 ~~~~~~~rC~~--C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~  142 (167)
                      ..+...+||+.  |+++ +|++|.|+ |+.+||..|||+|.|+|.-
T Consensus         7 k~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A            7 GRKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CCCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             CCcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            34556899998  9997 79999999 9999999999999999973

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.21  E-value=3.3e-12  Score=90.43  Aligned_cols=41  Identities=41%  Similarity=0.857  Sum_probs=38.2

Q ss_pred             CCCCcch--hhhcccccccccc-cCcccccCCCCCCCCCCcchhh
Q 031015          104 QPNRCSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSFDFK  145 (167)
Q Consensus       104 ~~~rC~~--C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~dyk  145 (167)
                      ..+||+.  |+++ ++++|+|+ |+.+||..|||++.|+|+++++
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~   56 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV   56 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence            4689998  9996 79999999 9999999999999999999986

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.80  E-value=1e-05  Score=52.28  Aligned_cols=29  Identities=24%  Similarity=0.812  Sum_probs=25.9

Q ss_pred             cccchh-ccCCCCCccccCCcchhhhHHHH
Q 031015           12 GHRLCA-NNCGFFGSTATMNLCSKCYRDHC   40 (167)
Q Consensus        12 ~p~lC~-ngCGFFGs~aT~nlCSkCyr~~~   40 (167)
                      +...|. .||-|||+|.+.++|..||.++.
T Consensus        14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyr   43 (48)
T 2eqe_A           14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYS   43 (48)
T ss_dssp             CSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred             ccchhhhcCCCcccCcccCceeeeehhhhh
Confidence            345895 99999999999999999999975

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=92.35  E-value=0.075  Score=37.59  Aligned_cols=29  Identities=31%  Similarity=0.858  Sum_probs=25.0

Q ss_pred             CCCCcchhhhcccccc--cccc-cCcccccCC
Q 031015          104 QPNRCSVCRKRIGLTG--FKCR-CGTIFCGTH  132 (167)
Q Consensus       104 ~~~rC~~C~kk~~l~~--f~Cr-Cg~~FC~~H  132 (167)
                      ....|..|.++.+++.  -.|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            4568999999998874  8999 999999875

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=92.03  E-value=0.052  Score=36.87  Aligned_cols=28  Identities=39%  Similarity=1.130  Sum_probs=24.5

Q ss_pred             CCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          106 NRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       106 ~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ..|..|+++.+++  --.|| ||.+||+.+-
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs   42 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHS   42 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred             CcccCCCCccCCccccccCCCCCEEEccccc
Confidence            5899999999887  48999 9999999864

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=91.07  E-value=0.11  Score=36.05  Aligned_cols=28  Identities=39%  Similarity=1.069  Sum_probs=24.2

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|.++.+++  --.|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            45899999999887  48999 999999875

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=90.33  E-value=0.093  Score=39.27  Aligned_cols=28  Identities=39%  Similarity=0.996  Sum_probs=24.0

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            45899999998876  48999 999999865

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=89.93  E-value=0.16  Score=35.31  Aligned_cols=28  Identities=32%  Similarity=0.815  Sum_probs=24.3

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            46899999998887  48999 999999874

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.88  E-value=0.17  Score=35.06  Aligned_cols=28  Identities=25%  Similarity=0.721  Sum_probs=24.3

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|.++.+++  --.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            46899999998887  48999 999999875

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=88.92  E-value=0.15  Score=40.87  Aligned_cols=28  Identities=39%  Similarity=1.022  Sum_probs=24.4

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            36999999999886  48999 999999975

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=88.73  E-value=0.22  Score=40.32  Aligned_cols=28  Identities=43%  Similarity=1.157  Sum_probs=24.5

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            46899999999887  58999 999999875

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=88.31  E-value=0.16  Score=35.77  Aligned_cols=28  Identities=36%  Similarity=1.032  Sum_probs=24.1

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH  132 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H  132 (167)
                      ...|..|.++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46899999999887  58999 999999864

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=86.02  E-value=0.26  Score=37.01  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=28.3

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCC---CCCCCCCCcchhh
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTH---RYPEKHGCSFDFK  145 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~H---R~~e~H~C~~dyk  145 (167)
                      ...|..|+++..++  --.|| ||.+||+..   +.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            36899999998876  48899 999998754   5555556665454

>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=80.49  E-value=1.2  Score=28.54  Aligned_cols=24  Identities=38%  Similarity=0.706  Sum_probs=20.9

Q ss_pred             hccCCCCCccccCCcchhhhHHHH
Q 031015           17 ANNCGFFGSTATMNLCSKCYRDHC   40 (167)
Q Consensus        17 ~ngCGFFGs~aT~nlCSkCyr~~~   40 (167)
                      .-||-||=|..|+-+|-.||...+
T Consensus        16 TPnCpF~mSVnTQP~CHEC~errq   39 (49)
T 2eqg_A           16 TPNCPFFMSVNTQPLCHECSERRQ   39 (49)
T ss_dssp             STTCCSBCCTTTTTSCHHHHHHHH
T ss_pred             CCCCCeEEEecCccchHHHHHHHh
Confidence            349999999999999999998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	3e-28
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	7e-24
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	1e-21
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	7e-21
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	2e-13

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 98.4 bits (245), Expect = 3e-28
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 82  EVNGDKDADVAVVLEQQQQQPPQPNRCSVCRKRIGL-TGFKCRCGTIFCGTHRYPEKHGC 140
                    +  V    Q +      C +C K+ GL T F+CRCG  FC +HRY E HGC
Sbjct: 2   SSGSSGIHHLPPVKAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGC 61

Query: 141 SFDFKKVGREEIARANPLIKA 161
           ++D+K  GR  +  ANP+   
Sbjct: 62  NYDYKSAGRRYLEEANPVSGP 82

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 86.4 bits (214), Expect = 7e-24
 Identities = 37/52 (71%), Positives = 42/52 (80%)

Query: 98  QQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR 149
           Q   P +PNRC+VCRKR+GLTGF CRCGT FCG+HRYPE HGC+FDFK  G 
Sbjct: 8   QPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGS 59

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.5 bits (201), Expect = 1e-21
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 96  EQQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR 149
           +  +   P+ NRC +CRK++GLTGF CRCG +FCG HRY +KH C +D+K    
Sbjct: 16  KAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS 69

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.2 bits (195), Expect = 7e-21
 Identities = 29/52 (55%), Positives = 33/52 (63%)

Query: 98  QQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR 149
                    RC  C K++G+TGFKCRCG+ FCGTHRYPE H C FDFK V  
Sbjct: 18  LDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS 69

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 2e-13
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 15 LCANNCGFFGSTATMNLCSKCYRDHCLKEQQQA 47
          LC   CG++G+ A    CSKC+R+   K +Q+ 
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.93
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.9
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.89
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.87
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.69
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.29
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	94.55
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	92.31
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	92.23
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	90.63
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	89.92
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	88.2

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=6.5e-28  Score=173.09  Aligned_cols=63  Identities=41%  Similarity=0.987  Sum_probs=58.3

Q ss_pred             CCCCCCCCcchhhhccccc-ccccccCcccccCCCCCCCCCCcchhhHhhHHHHHHhCCccccc
Q 031015          100 QQPPQPNRCSVCRKRIGLT-GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAE  162 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~-~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~i~k~Np~v~~~  162 (167)
                      ..+..++||+.|+|||+|+ +|+||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        20 ~kk~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          20 TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            3455678999999999995 89999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.2e-25  Score=153.52  Aligned_cols=52  Identities=69%  Similarity=1.520  Sum_probs=48.5

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhHHH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREE  151 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r~~  151 (167)
                      .++.+++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..
T Consensus        10 ~~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~   61 (64)
T d1wfha_          10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGP   61 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSC
T ss_pred             CCCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCC
Confidence            4567889999999999999999999999999999999999999999999853

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.1e-24  Score=151.09  Aligned_cols=50  Identities=54%  Similarity=1.317  Sum_probs=46.2

Q ss_pred             CCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhH
Q 031015          100 QQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR  149 (167)
Q Consensus       100 ~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r  149 (167)
                      .++.+++||..|+|||+|++|.||||++||+.|||||.|+|+||||+.|.
T Consensus        20 ~~k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             CCCCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            34567899999999999999999999999999999999999999998774

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=4.3e-24  Score=149.53  Aligned_cols=51  Identities=57%  Similarity=1.284  Sum_probs=48.0

Q ss_pred             cCCCCCCCCcchhhhcccccccccccCcccccCCCCCCCCCCcchhhHhhH
Q 031015           99 QQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGR  149 (167)
Q Consensus        99 ~~~~~~~~rC~~C~kk~~l~~f~CrCg~~FC~~HR~~e~H~C~~dyk~~~r  149 (167)
                      .+++.+++||..|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        19 ~~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            355677999999999999999999999999999999999999999999987

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.2e-18  Score=113.37  Aligned_cols=33  Identities=39%  Similarity=1.000  Sum_probs=30.1

Q ss_pred             chhccCCCCCccccCCcchhhhHHHHHHHhhhh
Q 031015           15 LCANNCGFFGSTATMNLCSKCYRDHCLKEQQQA   47 (167)
Q Consensus        15 lC~ngCGFFGs~aT~nlCSkCyr~~~~~~~~~~   47 (167)
                      ||.|||||||||+|+|||||||||++.++++..
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~~   33 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ   33 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHHH
Confidence            799999999999999999999999998776644

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=8.1e-08  Score=67.64  Aligned_cols=40  Identities=30%  Similarity=0.709  Sum_probs=34.4

Q ss_pred             CCCCCCcch--hhhcccccccccc-cCcccccCCCCCCCCCCcc
Q 031015          102 PPQPNRCSV--CRKRIGLTGFKCR-CGTIFCGTHRYPEKHGCSF  142 (167)
Q Consensus       102 ~~~~~rC~~--C~kk~~l~~f~Cr-Cg~~FC~~HR~~e~H~C~~  142 (167)
                      .....+|..  |++ +.+++|.|. |+..||..||+++.|.|..
T Consensus        22 ~~~~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          22 EHKSYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             CSCCEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CCccCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            345568995  986 679999998 9999999999999999973

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.55  E-value=0.0085  Score=40.99  Aligned_cols=30  Identities=30%  Similarity=0.809  Sum_probs=26.2

Q ss_pred             CCCCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          104 QPNRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       104 ~~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ..++|..|++..+++  -..|| ||.+||..+-
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs   40 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCL   40 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTS
T ss_pred             ccCcCcccCchhccccccccccccChhhChHHh
Confidence            468999999999887  58999 9999998764

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.31  E-value=0.027  Score=36.31  Aligned_cols=28  Identities=39%  Similarity=1.130  Sum_probs=24.1

Q ss_pred             CCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          106 NRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       106 ~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ..|..|+++.+++  --.|| ||.+||+.+-
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs   36 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHS   36 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred             cccccCCCcccCcccccccccCCCEeccccc
Confidence            4699999999987  48999 9999998873

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.23  E-value=0.036  Score=36.24  Aligned_cols=28  Identities=39%  Similarity=1.038  Sum_probs=24.9

Q ss_pred             CCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          106 NRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       106 ~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      +.|..|+++.+++  --.|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            5799999999987  58999 9999999885

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.63  E-value=0.042  Score=35.02  Aligned_cols=29  Identities=38%  Similarity=0.959  Sum_probs=24.7

Q ss_pred             CCCcchhhhccccc--ccccc-cCcccccCCC
Q 031015          105 PNRCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       105 ~~rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      ...|..|+++.+++  --.|| ||.+||+..-
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs   39 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECS   39 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGGS
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeeccccc
Confidence            35799999999887  58899 9999998764

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.92  E-value=0.062  Score=38.10  Aligned_cols=32  Identities=25%  Similarity=0.685  Sum_probs=25.8

Q ss_pred             CCCCCCcchhhhccccc---ccccc-cCcccccCCC
Q 031015          102 PPQPNRCSVCRKRIGLT---GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       102 ~~~~~rC~~C~kk~~l~---~f~Cr-Cg~~FC~~HR  133 (167)
                      ....+.|..|++.++++   +..|+ ||..||+.=+
T Consensus        45 ~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          45 GDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             ccCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            34467899999998864   46899 9999998853

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.20  E-value=0.075  Score=32.67  Aligned_cols=27  Identities=30%  Similarity=0.636  Sum_probs=23.0

Q ss_pred             Ccchhhhccccc--ccccc-cCcccccCCC
Q 031015          107 RCSVCRKRIGLT--GFKCR-CGTIFCGTHR  133 (167)
Q Consensus       107 rC~~C~kk~~l~--~f~Cr-Cg~~FC~~HR  133 (167)
                      -|..|+++.+++  -..|| ||.+||+..-
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs   31 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTCS   31 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGGE
T ss_pred             CccccCCcccCCccCcccccCCcccCcccc
Confidence            488999999887  48999 9999998763