Citrus Sinensis ID: 031056

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHcccccccEEEEEEEcccccccccccEEEEEEEcccccEEEEEcccccccccccccccccEEEEEcccccccEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcccccccccccccHHccccccHHHccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEccccccEEEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEccccccccHHHcc
Coil and Loop (DISEMBL)
MVKLLLFLLIFATATIfshagssiispteiksfepKTVQLQVAAKSCSYTVIIktscssksytrdKISLAFGDAYGNEVYIkrlddpysrtfescstdtfqisgpctydICYQYLLrsgsdgwkpesvkicgQNIRTVTFFyntfipdgvwfgfnqcrrgsgsavv
Flexible Loop (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIiktscssksytrdKISLAFGDAYGNEVYIKRLDDPYSRTFESCStdtfqisgpcTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Low Complexity Region (SEG)
MVKlllfllifatatifSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Disordered region (IsUnstruct)
**KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISOPRED)
**KLLLFLLIFATATIFSHA*************************SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC*********
Disordered Region (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISPRO)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRG******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
255567021	167	conserved hypothetical protein [Ricinus	0.975	0.970	0.672	9e-58
224087146	168	predicted protein [Populus trichocarpa]	0.981	0.970	0.647	6e-54
224142627	167	predicted protein [Populus trichocarpa]	0.981	0.976	0.635	1e-53
3241945	365	unknown protein [Arabidopsis thaliana]	0.933	0.424	0.65	3e-52
186507192	179	Embryo-specific protein 3, (ATS3) [Arabi	0.939	0.871	0.645	3e-51
297827789	179	hypothetical protein ARALYDRAFT_483224 [	0.939	0.871	0.639	3e-50
224054426	166	predicted protein [Populus trichocarpa]	0.963	0.963	0.614	2e-49
255553155	163	conserved hypothetical protein [Ricinus	0.921	0.938	0.641	4e-49
388508934	166	unknown [Lotus japonicus]	0.939	0.939	0.607	1e-48
317106727	162	JHL06P13.2 [Jatropha curcas]	0.807	0.827	0.635	2e-46

>gi|255567021|ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis] gi|223536281|gb|EEF37933.1| conserved hypothetical protein [Ricinus communis]

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 111/165 (67%), Positives = 129/165 (78%), Gaps = 3/165 (1%)

Query: 1   MVKLLLFLLIFATATIFSHAGSSIISPTE--IKSFEPKTVQLQVAAKSCSYTVIIKTSCS 58
           MVKLL FLLIF   +I S   +S+  P    + SF PK++Q    A+SCSYTV++KTSCS
Sbjct: 1   MVKLLSFLLIFVFFSIISPPATSVSPPQPHLLNSFPPKSIQ-AANARSCSYTVVVKTSCS 59

Query: 59  SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRS 118
           S SYTRDKISLAFGD+YGNEVY+KRLDDP S TF+ CS+DTFQISGPCTY ICY YLLR 
Sbjct: 60  SSSYTRDKISLAFGDSYGNEVYLKRLDDPSSGTFDRCSSDTFQISGPCTYGICYLYLLRR 119

Query: 119 GSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGS 163
           GSDGWKPESVKI G N +T+ F YNTF+P+GVW+GFN CR  S S
Sbjct: 120 GSDGWKPESVKIYGPNTKTINFKYNTFLPNGVWYGFNLCRHASSS 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087146|ref|XP_002308084.1| predicted protein [Populus trichocarpa] gi|222854060|gb|EEE91607.1| predicted protein [Populus trichocarpa]

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 110/170 (64%), Positives = 129/170 (75%), Gaps = 7/170 (4%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGSS--IISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTS 56
           MVK + LF LIF  ++I FSHA S    + P   KSF PK +Q   AAKSC YT++IKTS
Sbjct: 1   MVKQISLFWLIFVFSSITFSHARSLSLTLQPHAPKSFNPKNIQ---AAKSCPYTLVIKTS 57

Query: 57  CSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLL 116
           C+S +YTRDKISLAFGD+YGNEVY+KRLDDP S TFE CSTDTFQI+GPC YDICY Y+L
Sbjct: 58  CTSTTYTRDKISLAFGDSYGNEVYMKRLDDPSSGTFERCSTDTFQINGPCVYDICYLYML 117

Query: 117 RSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV 166
           R+G DGWKPESVKI G   +TV F YN F+P+GVW+GFN C R S S  +
Sbjct: 118 RTGYDGWKPESVKIYGPYTKTVKFNYNKFLPNGVWYGFNVCVRASLSTAI 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142627|ref|XP_002324656.1| predicted protein [Populus trichocarpa] gi|222866090|gb|EEF03221.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/170 (63%), Positives = 131/170 (77%), Gaps = 7/170 (4%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGS--SIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTS 56
           MVK L LF L+F  ++I F H+ S    + P  +KSF PK +Q   AAKSC Y ++IKTS
Sbjct: 1   MVKHLSLFGLVFVFSSITFPHSSSISPTLQPRPLKSFYPKNIQ---AAKSCPYELVIKTS 57

Query: 57  CSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLL 116
           CSS +YTRDKISLAFGD+YGNEVYIKRLDDP S TFE CSTD+FQI+GPC  D+CY Y+L
Sbjct: 58  CSSTTYTRDKISLAFGDSYGNEVYIKRLDDPSSGTFERCSTDSFQINGPCVDDVCYLYML 117

Query: 117 RSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV 166
           R+G+DGWKPESVKI G   +TVTF YN F+P+GVW+GFN C R S SA++
Sbjct: 118 RTGADGWKPESVKIYGSYTKTVTFNYNKFLPNGVWYGFNVCGRASESAIM 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3241945|gb|AAC23732.1| unknown protein [Arabidopsis thaliana]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 5/160 (3%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQLQVAAKSCSYTVIIKTSC 57
           M++L + L +FA  + T+FS A S I + P  I SF PK  +L+ AA +CSYTVIIKTSC
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKP-KLENAA-ACSYTVIIKTSC 58

Query: 58  SSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLR 117
           SS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR
Sbjct: 59  SSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLR 118

Query: 118 SGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 157
            GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C
Sbjct: 119 QGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186507192|ref|NP_001118501.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana] gi|51968470|dbj|BAD42927.1| unknown protein [Arabidopsis thaliana] gi|51969372|dbj|BAD43378.1| unknown protein [Arabidopsis thaliana] gi|51969672|dbj|BAD43528.1| unknown protein [Arabidopsis thaliana] gi|62320996|dbj|BAD94040.1| hypothetical protein [Arabidopsis thaliana] gi|62321118|dbj|BAD94228.1| hypothetical protein [Arabidopsis thaliana] gi|110736474|dbj|BAF00205.1| hypothetical protein [Arabidopsis thaliana] gi|330254894|gb|AEC09988.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]

 Score =  206 bits (524), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQLQVAAKSCSYTVIIKTSC 57
           M++L + L +FA  + T+FS A S I + P  I SF PK  +L+ AA +CSYTVIIKTSC
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKP-KLENAA-ACSYTVIIKTSC 58

Query: 58  SSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLR 117
           SS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR
Sbjct: 59  SSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLR 118

Query: 118 SGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 158
            GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 119 QGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827789|ref|XP_002881777.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata] gi|297327616|gb|EFH58036.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 125/161 (77%), Gaps = 5/161 (3%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQLQVAAKSCSYTVIIKTSC 57
           M++L + L +FA  + T FS A S I + P  I SF PK  +L+ A   CSYTVIIKTSC
Sbjct: 1   MLRLAISLFLFALCSLTSFSSARSFITTKPLPIDSFLPKP-KLENAG-VCSYTVIIKTSC 58

Query: 58  SSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLR 117
           SS SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR
Sbjct: 59  SSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLR 118

Query: 118 SGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 158
            GSDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 119 QGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054426|ref|XP_002298254.1| predicted protein [Populus trichocarpa] gi|222845512|gb|EEE83059.1| predicted protein [Populus trichocarpa]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/161 (61%), Positives = 112/161 (69%), Gaps = 1/161 (0%)

Query: 4   LLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYT 63
           L+ F L  A       A S I  P  + SF+  T  LQ  A SCSYTV I+TSCSS  YT
Sbjct: 7   LVTFWLYLAVVFTPPQAKSKITQPQPLTSFKINTT-LQNTASSCSYTVTIRTSCSSSRYT 65

Query: 64  RDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGW 123
           RD+ISLAFGDAYG +VY+ RLDDP SRTFESCSTDTF I GPCTY ICY YL R+G DGW
Sbjct: 66  RDRISLAFGDAYGYQVYVPRLDDPRSRTFESCSTDTFHIDGPCTYQICYVYLYRNGYDGW 125

Query: 124 KPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSA 164
           KPES+ I G    +VTF+YNTFIP+ VW+GFN C   S SA
Sbjct: 126 KPESITISGYYTSSVTFYYNTFIPNAVWYGFNHCNAASSSA 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553155|ref|XP_002517620.1| conserved hypothetical protein [Ricinus communis] gi|223543252|gb|EEF44784.1| conserved hypothetical protein [Ricinus communis]

 Score =  199 bits (506), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 100/156 (64%), Positives = 112/156 (71%), Gaps = 3/156 (1%)

Query: 3   KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSY 62
           K + FLL  A     S+A S I  P  +KSF+    Q    A SCSYTV I TSCSS  Y
Sbjct: 5   KAVTFLLFLALIVTLSNARSIIPLPQPLKSFKINATQ---NANSCSYTVKITTSCSSTRY 61

Query: 63  TRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDG 122
           TRD+ISLAFGDAYGN+VY  RLDDPYS TFESCSTDTFQI GPCTY ICY YL RSG DG
Sbjct: 62  TRDQISLAFGDAYGNQVYAPRLDDPYSATFESCSTDTFQIKGPCTYQICYVYLYRSGYDG 121

Query: 123 WKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 158
           WKP++V + G   ++VTF YNTFIP+GVWFGFN C 
Sbjct: 122 WKPKTVTVYGYYTKSVTFTYNTFIPNGVWFGFNYCN 157

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508934|gb|AFK42533.1| unknown [Lotus japonicus]

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/158 (60%), Positives = 116/158 (73%), Gaps = 2/158 (1%)

Query: 2   VKLLLFLLIFATATIFSHAGSSIISPTEI-KSFEPKTVQLQVAAKSCSYTVIIKTSCSSK 60
           +K L  +L F+  ++FS A   +  P +  +SF+P   Q Q  A  CSYTV I+TSCSS 
Sbjct: 1   MKTLTLILTFSIISVFSQATLLLTDPPQPNESFKPNLTQHQQNA-GCSYTVTIRTSCSSP 59

Query: 61  SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS 120
           SYTRD+ISL+FGDAYG +VY+ RLDDP SRTFE CSTDTFQI+GPCTY ICY YL RSG 
Sbjct: 60  SYTRDRISLSFGDAYGYQVYVPRLDDPSSRTFERCSTDTFQINGPCTYQICYLYLYRSGY 119

Query: 121 DGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 158
           DGW PESV + G N + VTF+YN FIP G+WFGF+ CR
Sbjct: 120 DGWIPESVTVSGYNSQPVTFYYNAFIPAGIWFGFDYCR 157

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106727|dbj|BAJ53223.1| JHL06P13.2 [Jatropha curcas]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 103/137 (75%), Gaps = 3/137 (2%)

Query: 27  PTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDD 86
           P  ++SF+  T Q    A SC +TV I TSCSS  YTRD+ISL+FGDAYGN+VY+ RLDD
Sbjct: 28  PQPLRSFKINTTQ---TANSCPFTVKISTSCSSTRYTRDRISLSFGDAYGNQVYVPRLDD 84

Query: 87  PYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFI 146
           PYSRTFESCSTDTFQ++GPCTY ICY YL RSG DGWKP++V + G N R   F YN FI
Sbjct: 85  PYSRTFESCSTDTFQVTGPCTYQICYLYLYRSGYDGWKPKTVTVYGHNTRNAVFTYNIFI 144

Query: 147 PDGVWFGFNQCRRGSGS 163
           P+ +W+GFN C R S S
Sbjct: 145 PNDIWYGFNYCNRASAS 161

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.861	0.798	0.673	3.2e-49
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.861	0.752	0.554	9.3e-43
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.789	0.587	0.440	1.3e-27
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.746	0.582	0.407	7.8e-23

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 99/147 (67%), Positives = 118/147 (80%)

Query:    18 SHAGSSIIS-PTEIKSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYG 76
             S A S I + P  I SF PK  +L+ AA +CSYTVIIKTSCSS SYTRDKIS++FGD YG
Sbjct:    20 SSARSFITTKPLPIDSFIPKP-KLENAA-ACSYTVIIKTSCSSVSYTRDKISISFGDVYG 77

Query:    77 NEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIR 136
             NEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR GSDGWKPE+VKI G +IR
Sbjct:    78 NEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIR 137

Query:   137 TVTFFYNTFIPDGVWFGFNQCRRGSGS 163
             +VTF+YN F+P+ VW+GFN C  G G+
Sbjct:   138 SVTFYYNLFLPNSVWYGFNVCN-GIGN 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 81/146 (55%), Positives = 103/146 (70%)

Query:    22 SSIISPTEI-KSFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVY 80
             S ++ P  + +SF    +Q      +C+YTVII TSCSS  YTRD+IS+AFGD YGN++Y
Sbjct:    24 SKVLDPPHVAESFNVSLIQK--LGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIY 81

Query:    81 IKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTF 140
               RLDDP ++TFE CS+DTFQI+GPCTY ICY YL RSG DGW P +VKI     + VTF
Sbjct:    82 APRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTF 141

Query:   141 FYNTFIPDGVWFGFNQCRRGSGSAVV 166
              YNT++P+ VW+GFN C   S S V+
Sbjct:   142 PYNTYVPESVWYGFNYCNSASDSNVL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 59/134 (44%), Positives = 84/134 (62%)

Query:    27 PTEIKSFEPKTVQLQV-AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD 85
             P    +FEP    L +   +SC YTVI+ TSC S  ++RD++++A GDA  N+V   RLD
Sbjct:    19 PIPSLTFEPLISSLDLHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLD 78

Query:    86 DPYSRT--FESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYN 143
              P S    FE CS+DTFQ+ G C   IC  Y+ RSG+DGW PE+V+I  +  ++V F +N
Sbjct:    79 KPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFN 138

Query:   144 TFIPDGVWFGFNQC 157
               +P+ +W+G N C
Sbjct:   139 KNVPENIWYGNNYC 152

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 53/130 (40%), Positives = 77/130 (59%)

Query:    32 SFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRT 91
             +F+   +Q+Q    +C YTV++ TSC S   TRD+IS+ FGDA GN+VY  +L       
Sbjct:    21 AFDLSIIQMQQG--TCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGP 78

Query:    92 --FESCSTDTFQISGPCTYD-ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPD 148
                  CST+TFQ+ G C  D IC  Y+ R+G DGW PES++I  +  ++V F ++  +P 
Sbjct:    79 GGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQ 138

Query:   149 -GVWFGFNQC 157
                W+G N C
Sbjct:   139 LNTWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       152   0.00073  105 3  11 22  0.47    31
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.14u 0.11s 15.25t   Elapsed:  00:00:01
  Total cpu time:  15.14u 0.11s 15.25t   Elapsed:  00:00:01
  Start:  Fri May 10 09:18:38 2013   End:  Fri May 10 09:18:39 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	166
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	8e-63
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	2e-27
cd01754	129	cd01754, PLAT_plant_stress, PLAT/LH2 domain of pla	0.001
pfam01477	115	pfam01477, PLAT, PLAT/LH2 domain	0.003

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  189 bits (481), Expect = 8e-63
 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 2/127 (1%)

Query: 32  SFEPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-R 90
           S +         + SCSYTVIIKTSCSS +YT D+IS+AFGDAYGN+VY+ RLDDP S  
Sbjct: 1   SLQQSNTTELAGS-SCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLDDPSSGG 59

Query: 91  TFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGV 150
            FE C+TDTFQ+SGPCTY ICY YL RSG+DGW PE+V I G     VTF++NTF+P+GV
Sbjct: 60  GFERCTTDTFQVSGPCTYPICYLYLYRSGTDGWIPETVTIYGYGYPPVTFYFNTFLPEGV 119

Query: 151 WFGFNQC 157
           W+GFN C
Sbjct: 120 WYGFNYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 99.0 bits (247), Expect = 2e-27
 Identities = 46/118 (38%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 47  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP- 105
           C YTV IKT     + T   ISLA     GN   I  LD P   +FE  STDTFQI    
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGP--GSFERGSTDTFQIDLKL 58

Query: 106 CTYDICYQYLLRSGS---DGWKPESVKICGQNIRT---VTFFYNTFIPDGVWFGFNQC 157
              DI   YL R GS   DGW  ES+ +  Q + T    TF  N ++  G W+   + 
Sbjct: 59  DIGDITKVYLRRDGSGLSDGWYCESITV--QALGTKKVYTFPVNRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

>gnl|CDD|238852 cd01754, PLAT_plant_stress, PLAT/LH2 domain of plant-specific single domain protein family with unknown function

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 47  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDD------PYSRTFESCSTDTF 100
           C YT+ ++T    K+ T  +ISL   DA G  + I  L+            FE  + D F
Sbjct: 1   CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRF 60

Query: 101 QISGPC-TYDICYQYLLRSGSD---GW 123
              GPC     C+  L   G+    GW
Sbjct: 61  SGRGPCLPSPPCWMNLTSDGTGNHPGW 87

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 129

>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 49  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 108
           Y V +KT     + T   + ++    +G       L +P  +  +  STD+F        
Sbjct: 1   YQVKVKTGDELGAGTDANVYISLYGTHGKSGEYP-LLEPELKPDDRGSTDSFTFDTDEDL 59

Query: 109 -DICYQYLLR---SGSDGWKPESVKIC-GQNIRTVTF 140
            D+    +       SD W  +S+ +  G    T TF
Sbjct: 60  GDLGAIKIRWEINGHSDEWFLKSILVKSGPTGGTYTF 96

This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich. Length = 115

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	100.0
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.97
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.97
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.97
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.96
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.96
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	99.94
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.94
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.91
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	99.66
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	99.43
KOG2080	1295	consensus Uncharacterized conserved protein, conta	98.61
cd01759	113	PLAT_PL PLAT/LH2 domain of pancreatic triglyceride	98.06
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	97.22
cd01751	137	PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re	86.8

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=4.4e-40  Score=252.26  Aligned_cols=123  Identities=66%  Similarity=1.195  Sum_probs=116.6

Q ss_pred             CchhhhhhhcCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCC-CcccCCCcceeEeecCCCCCeEE
Q 031056           34 EPKTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-RTFESCSTDTFQISGPCTYDICY  112 (166)
Q Consensus        34 ~~~~~~~~~~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~-~~FErGsvDtF~v~~~~lG~Ic~  112 (166)
                      ++.+.+++ +.+.|+|+|+|+|||.++|||+++|+|+|+|++|+++...+||+|.. ++||||++|+|.+.++|+++||+
T Consensus         2 ~~~~~~~~-~~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~p~~~~~FErCs~DtF~v~G~C~~~IC~   80 (125)
T PF06232_consen    2 QQINETEQ-QAGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDDPGSGDTFERCSTDTFQVTGPCLYQICY   80 (125)
T ss_pred             cccchhhh-cCCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCCCCccCchhcCCcceeEeecccCCcccE
Confidence            55666665 56679999999999999999999999999999999999999999987 99999999999999999999999


Q ss_pred             EEEEEcCCCCceeeEEEEEeCCCCeEEEEcCeecCCCceeeecCC
Q 031056          113 QYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       113 l~L~hdG~d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                      |+|+|+|.|||+||+|+|+....++.+|++|+||++|+|||+|+|
T Consensus        81 lyL~r~G~dGW~Pe~V~Iy~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   81 LYLYRSGSDGWKPEWVQIYGSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             EEEEEccCCCCEeCeEEEEEcCCCCeEEECCCcCCCCCcccccCC
Confidence            999999999999999999998888999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=100.00  E-value=3.3e-33  Score=215.47  Aligned_cols=102  Identities=25%  Similarity=0.385  Sum_probs=89.7

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCC-------CcCCCcccCCCcceeEeecCC-CCCeEEEEEEEc
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD-------DPYSRTFESCSTDTFQISGPC-TYDICYQYLLRS  118 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld-------~~~~~~FErGsvDtF~v~~~~-lG~Ic~l~L~hd  118 (166)
                      |.|+|+|+||++++|||||+|+|+|+|++|++ ....|.       ++.++.||||++|+|.|..++ +|+|++|+||||
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s-~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HD   79 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPG-LRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSD   79 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCc-ccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEEC
Confidence            78999999999999999999999999999985 455552       356789999999999998765 599999999999


Q ss_pred             CC--C-CceeeEEEEEeC-C---CCeEEEEcCeecCCC
Q 031056          119 GS--D-GWKPESVKICGQ-N---IRTVTFFYNTFIPDG  149 (166)
Q Consensus       119 G~--d-~W~~e~V~V~~~-~---~~~~~F~cnrWL~~~  149 (166)
                      ++  + +|||++|+|++. +   +++++|||||||+.+
T Consensus        80 n~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d  117 (129)
T cd01754          80 GTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATD  117 (129)
T ss_pred             CCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCC
Confidence            54  3 999999999986 3   358999999999987

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.97  E-value=9e-31  Score=196.88  Aligned_cols=101  Identities=20%  Similarity=0.180  Sum_probs=92.3

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-Cc
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-GW  123 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~--d-~W  123 (166)
                      .|+|+|+||++++|||||+|+|+|+|++|+ +....|+++.+ +||||++|+|.+.. .++|+|++|+||||+.  + +|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~-S~~~~L~~~~~-~FerG~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W   79 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGE-SEKQLLDRPGY-DFERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAW   79 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCc-ccCEEcCCCCC-ccCCCCeeEEEEecccCCCCcEEEEEEECCCCCCCCe
Confidence            699999999999999999999999999997 57788888775 49999999999987 5789999999999954  3 99


Q ss_pred             eeeEEEEEeCCCCeEEEEcCeecCCCc
Q 031056          124 KPESVKICGQNIRTVTFFYNTFIPDGV  150 (166)
Q Consensus       124 ~~e~V~V~~~~~~~~~F~cnrWL~~~~  150 (166)
                      ||++|+|+++.++.+.|||||||+++.
T Consensus        80 ~l~~V~V~~~~~~~~~F~c~rWl~~~~  106 (113)
T cd01753          80 FCNYITVTGPGGDEYHFPCYRWIEGYG  106 (113)
T ss_pred             eecEEEEEcCCCCEEEEEhHHeECCCC
Confidence            999999998889999999999999873

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.97  E-value=4.6e-30  Score=193.65  Aligned_cols=102  Identities=20%  Similarity=0.240  Sum_probs=94.4

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCc-CCCcccCCCcceeEeecCCCCCeEEEEEEEcCC---CCc
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDP-YSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---DGW  123 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~-~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~---d~W  123 (166)
                      .|+|+|+||+.++|||||+|+|+|+|++|+ +....|+++ .+++||||++|+|.+....+|+|.+|+||||+.   ++|
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~-s~~~~L~~~~~~~~FerGs~d~F~i~~~~lG~l~~i~i~~d~~g~~~~W   80 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGD-TGKRKLKKSNNKNKFERGQTDKFTVEAVDLGKLKKIRIGHDNSGLGAGW   80 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCc-cccEEccCCCcCCcccCCCeEEEEEEecCCCCeEEEEEEECCCCCCCCc
Confidence            699999999999999999999999999997 578889886 678999999999999888889999999999954   399


Q ss_pred             eeeEEEEEeC-CCCeEEEEcCeecCCCc
Q 031056          124 KPESVKICGQ-NIRTVTFFYNTFIPDGV  150 (166)
Q Consensus       124 ~~e~V~V~~~-~~~~~~F~cnrWL~~~~  150 (166)
                      ||++|+|+++ +++.+.|||+|||+.+.
T Consensus        81 ~~~~V~V~~~~~~~~~~F~~~~Wl~~~~  108 (120)
T cd01756          81 FLDKVEIREPGTGDEYTFPCNRWLDKDE  108 (120)
T ss_pred             EEeEEEEEECCCceEEEEEeCCccCCCC
Confidence            9999999988 78999999999999874

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.97  E-value=4.7e-30  Score=193.76  Aligned_cols=103  Identities=20%  Similarity=0.219  Sum_probs=94.2

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-C
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-G  122 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~--d-~  122 (166)
                      +.|+|+|+||++++|||||+|+|+|+|++|++ ....|.++.+++||||++|+|.+.. .++|+|++|+||||+.  + +
T Consensus         1 ~~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s-~~~~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~   79 (120)
T cd01752           1 YLYLVTVFTGWRRGAGTTAKVTITLYGAEGES-EPHHLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPS   79 (120)
T ss_pred             CEEEEEEEECCCCCCCcccEEEEEEEeCCCCc-ccEEcCCCCccceeCCCeeEEEecCccCCCCccEEEEEECCCCCCCC
Confidence            47999999999999999999999999999974 6788988888999999999999986 5789999999999954  3 9


Q ss_pred             ceeeEEEEEeC-CCCeEEEEcCeecCCCc
Q 031056          123 WKPESVKICGQ-NIRTVTFFYNTFIPDGV  150 (166)
Q Consensus       123 W~~e~V~V~~~-~~~~~~F~cnrWL~~~~  150 (166)
                      |||++|+|+++ +++.+.|||+|||+.+.
T Consensus        80 W~l~~V~V~~~~t~~~~~F~~~rWl~~~~  108 (120)
T cd01752          80 WYLSRVIVRDLQTGKKWFFLCNDWLSVEE  108 (120)
T ss_pred             eEEEEEEEEECCCCcEEEEEeCcEECCcC
Confidence            99999999988 78999999999999763

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.96  E-value=3.5e-29  Score=185.51  Aligned_cols=109  Identities=37%  Similarity=0.456  Sum_probs=95.8

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecC-CCCCeEEEEEEEcCCC---C
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGSD---G  122 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~-~lG~Ic~l~L~hdG~d---~  122 (166)
                      |.|+|+|+||+..+|||+++|+|.|+|++|++. ...|.+.... ||||++|+|.+..+ ++|+|++|+||||+.+   +
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~-~~~l~~~~~~-f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~   78 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSS-DIPILDGPGS-FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDG   78 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcc-cEEccCCCCc-ccCCCceEEEEeccCCCcCeEEEEEEECCCCCCCC
Confidence            689999999999999999999999999999864 4455443323 99999999999876 7799999999999764   9


Q ss_pred             ceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          123 WKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       123 W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                      |||++|+|+++ +++.+.|+|++||+.+.++..++|
T Consensus        79 W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          79 WYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             EEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceee
Confidence            99999999987 679999999999999988877665

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.96  E-value=2e-29  Score=189.49  Aligned_cols=97  Identities=19%  Similarity=0.217  Sum_probs=89.2

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCCC-Cceee
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSD-GWKPE  126 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~d-~W~~e  126 (166)
                      .|+|+|+||...+|||+++|+|+|+|++|.+ ....|++    +||||++|+|.|+..++|+|.+|+|+++|.+ +|||+
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S-~~~~L~~----~F~~G~~d~F~v~~~dLG~l~~i~l~n~g~~~~Wf~~   76 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRS-NPKTLSQ----GFYPGSLKRIRFRAADVGDINAIILSNTALNDPWYCD   76 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCc-CCEEccC----ccCCCceEEEEECccccCceEEEEEECCCCCCCceee
Confidence            6999999999999999999999999999974 6677764    6999999999999888899999999888864 99999


Q ss_pred             EEEEEeCCCCeEEEEcCeecCCC
Q 031056          127 SVKICGQNIRTVTFFYNTFIPDG  149 (166)
Q Consensus       127 ~V~V~~~~~~~~~F~cnrWL~~~  149 (166)
                      +|+|++++++.+.|||||||+..
T Consensus        77 ~V~V~~~~g~~~~Fpc~rWla~~   99 (109)
T cd02899          77 YVRIKSEDGKVFAFNVKRWIGYP   99 (109)
T ss_pred             EEEEECCCCCEEEEEcceeeCCc
Confidence            99999998899999999999964

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=99.94  E-value=1.3e-26  Score=175.51  Aligned_cols=94  Identities=15%  Similarity=0.140  Sum_probs=81.6

Q ss_pred             eEEEEEEcCCC-CCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--C-Cc
Q 031056           48 SYTVIIKTSCS-SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--D-GW  123 (166)
Q Consensus        48 ~Y~V~V~TG~~-~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~--d-~W  123 (166)
                      .|+|+|+||.. ++|||+|||+|+|+|++|+ +.+..|++.   .|      .|.+...+||+|.+|+||||++  + +|
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~-s~~~~L~~~---~f------~~~v~~~~LG~L~~irIwHDnsG~~~~W   71 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGE-TPPLQIPKN---SL------EMTFDCQNLGKLTTVQIGHDNSGLLAKW   71 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCC-cCCEEecCC---ce------EEEEecCCcCCcEEEEEEECCCCCCCCe
Confidence            69999999999 5999999999999999997 577788632   33      5777678899999999999954  3 99


Q ss_pred             eeeEEEEEeC-CCCeEEEEcCeecCCCce
Q 031056          124 KPESVKICGQ-NIRTVTFFYNTFIPDGVW  151 (166)
Q Consensus       124 ~~e~V~V~~~-~~~~~~F~cnrWL~~~~~  151 (166)
                      ||++|+|+++ ++++|.|||||||+.+..
T Consensus        72 fl~~V~V~d~~t~~~~~FpC~rWLa~~~~  100 (114)
T cd01757          72 LVEYVMVRNEITGHTYKFPCGRWLGEGVD  100 (114)
T ss_pred             eeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence            9999999985 899999999999997644

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.94  E-value=1e-25  Score=164.47  Aligned_cols=100  Identities=18%  Similarity=0.161  Sum_probs=87.7

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcC-CCCcee
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSG-SDGWKP  125 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG-~d~W~~  125 (166)
                      .|+|+|.||...+|||||+|+|+|+|++|++ ....+....+..||||++|+|.+.. .++|+|.+|+||||+ ..+|||
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s-~~~~~~~~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l   80 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDG-KESKLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFL   80 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCC-cceeccccCCccccCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEE
Confidence            6999999999999999999999999999762 3444544444569999999999987 468999999999998 569999


Q ss_pred             eEEEEEeC-CCCeEEEEcCeecCC
Q 031056          126 ESVKICGQ-NIRTVTFFYNTFIPD  148 (166)
Q Consensus       126 e~V~V~~~-~~~~~~F~cnrWL~~  148 (166)
                      ++|+|+++ +++.+.|+||+||+.
T Consensus        81 ~~V~V~~~~~~~~~~F~c~~Wl~~  104 (105)
T smart00308       81 KSITVKDLPTGGKYHFPCNSWVYP  104 (105)
T ss_pred             EEEEEEECCCCCEEEEEcCceeCC
Confidence            99999986 889999999999975

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.91  E-value=1.2e-24  Score=158.98  Aligned_cols=100  Identities=27%  Similarity=0.267  Sum_probs=86.2

Q ss_pred             EEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC---CCce
Q 031056           49 YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS---DGWK  124 (166)
Q Consensus        49 Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~---d~W~  124 (166)
                      |+|+|+||+..+|||||+|+|.|+|++|++ ....|.++....+  |++|+|.+.. .++|+|.+|+|+|++.   ++||
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s-~~~~l~~~~~~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~   77 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKS-GEIELLDPSGFNF--GSTDTFTIETPEDLGEIQKIRIWHDGSGPSPSWY   77 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEE-EEEEEEEEEETST--TEEEEEEEEESSCGCSEEEEEEEEESSSSSSEEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCc-ceEEEeeeeeccc--CceEEeeeeecccCCCCcEEEEEEccCCCccceE
Confidence            999999999999999999999999999975 4555554432333  9999999987 6789999999999954   3999


Q ss_pred             eeEEEEEeC-CCCeEEEEcCeecCCCce
Q 031056          125 PESVKICGQ-NIRTVTFFYNTFIPDGVW  151 (166)
Q Consensus       125 ~e~V~V~~~-~~~~~~F~cnrWL~~~~~  151 (166)
                      |++|+|+++ +++.+.|+||+||..+..
T Consensus        78 l~~V~V~~~~~~~~~~F~~~~Wl~~~~~  105 (113)
T PF01477_consen   78 LDSVVVTDGETGRTYTFPCNRWLDPDKD  105 (113)
T ss_dssp             EEEEEEEETTTSEEEEEEEEEEESTTEG
T ss_pred             EEEEEEEeCCCCcEEEEEcCCEECCCCC
Confidence            999999986 889999999999998753

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=99.66  E-value=9.5e-16  Score=116.25  Aligned_cols=90  Identities=12%  Similarity=0.065  Sum_probs=78.1

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcC----C-
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSG----S-  120 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~L~hdG----~-  120 (166)
                      +.|+|+|.||...+|||+++|+|.|+|++|++ ....|..+   .||+|++++|.+. ..++|+|.+|++|||+    . 
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s-~~~~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~   76 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGET-EQLPIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSN   76 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCc-ccEEEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCcccc
Confidence            47999999999999999999999999999984 67777543   4799999999995 5778999999999993    2 


Q ss_pred             ----C-CceeeEEEEEeC-CCCeEEE
Q 031056          121 ----D-GWKPESVKICGQ-NIRTVTF  140 (166)
Q Consensus       121 ----d-~W~~e~V~V~~~-~~~~~~F  140 (166)
                          . .|++++|.|++. +++++.|
T Consensus        77 ~~~~~p~~~~~~I~Vq~get~~~~~F  102 (120)
T cd01755          77 SGETLPKLGARKIRVKSGETQKKFTF  102 (120)
T ss_pred             cccCCCcEEEEEEEEEECCCCCEEEE
Confidence                3 999999999987 6777776

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=99.43  E-value=1.7e-12  Score=101.15  Aligned_cols=91  Identities=16%  Similarity=0.231  Sum_probs=75.8

Q ss_pred             ceEEEEEEcCCCCCCc-CceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEE-EEcCC--C
Q 031056           47 CSYTVIIKTSCSSKSY-TRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYL-LRSGS--D  121 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AG-Tda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~L-~hdG~--d  121 (166)
                      +.|+|+|.||....|| |+++|+|.|+|.+|++ ....|..+  ..+++|++++|.+. ..++|+|.+|++ |||..  .
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S-~~~~l~~~--~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~~~~   77 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGES-ENLPLTLP--EGITGNKTNSFLITTEKDIGDLLMLKLKWEGSSLWS   77 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcc-cCEEEecC--cccCCCCeEEEEEECCCCcCCEEEEEEEEeCCCCCC
Confidence            4799999999999999 9999999999999974 67777654  34699999999995 578899999999 99843  2


Q ss_pred             -Cce------------------eeEEEEEeC-CCCeEEE
Q 031056          122 -GWK------------------PESVKICGQ-NIRTVTF  140 (166)
Q Consensus       122 -~W~------------------~e~V~V~~~-~~~~~~F  140 (166)
                       +|+                  .++|.|+.. +.+++.|
T Consensus        78 ~sW~~~~~~~~~~~~~~~p~l~~~~I~Vk~GEtq~~~~F  116 (137)
T cd01758          78 NSWWTVQTIIPWSGWWRGSGLTIRKIRVKAGETQKKMTF  116 (137)
T ss_pred             hhhhccccccccccccCCCeEEEEEEEEEeCCCccEEEE
Confidence             774                  688999866 5566666

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]

Probab=98.61  E-value=3.9e-08  Score=94.73  Aligned_cols=90  Identities=19%  Similarity=0.158  Sum_probs=77.7

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--C-Cce
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--D-GWK  124 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~--d-~W~  124 (166)
                      .|.|.|.||  .+.|+.++|-|.+.|+-+.+ ....|+ +        ++=.|.+....||.+.-|+|.||.+  . -|+
T Consensus       975 ~Y~vvIv~~--~g~~~~~~iWi~vsGsl~eT-~~i~~~-~--------n~~~f~F~~kNLG~LtT~rIGHdnS~~~~kW~ 1042 (1295)
T KOG2080|consen  975 DYQVVIVTG--SGRGAIPAIWVTVEGSLCST-PPIMLK-P--------NTPLFKFDHKNLGILSTLRIGHQQSEKPVQWF 1042 (1295)
T ss_pred             ceEEEEEeC--CCCcccCceEEEEecccCCC-CceeeC-C--------CCceeEEeccccceeeeEEecccCCCcchHHH
Confidence            599999999  78999999999999999863 444442 1        4567888999999999999999954  3 999


Q ss_pred             eeEEEEEeC-CCCeEEEEcCeecCCC
Q 031056          125 PESVKICGQ-NIRTVTFFYNTFIPDG  149 (166)
Q Consensus       125 ~e~V~V~~~-~~~~~~F~cnrWL~~~  149 (166)
                      +|+|.|.+. +|++|.|||.||+..|
T Consensus      1043 vEyV~vRNEiTG~TYKFPCGrw~G~g 1068 (1295)
T KOG2080|consen 1043 LEYVLVRNEITGQTYKFPCGRWFGNG 1068 (1295)
T ss_pred             HHHhhhhceeccceeccccccccCCc
Confidence            999999988 9999999999999876

>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase

Probab=98.06  E-value=6.9e-05  Score=56.82  Aligned_cols=90  Identities=13%  Similarity=0.096  Sum_probs=69.1

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcCCC-----
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSGSD-----  121 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~L~hdG~d-----  121 (166)
                      .|+|+|.-+....  ++..++|.|+|.+|++ ....+.   ...|+.|++-+|.+. ..++|+|.+|+++.++.-     
T Consensus         2 ~Yqv~V~~s~~~~--~~g~~~vsL~G~~g~s-~~~~i~---~g~l~pg~tys~li~~d~dvG~l~~Vkf~W~~~~~n~~~   75 (113)
T cd01759           2 RYKVSVTLSGKKK--VTGTILVSLYGNKGNT-RQYEIF---KGTLKPGNTYSAFIDVDVDVGPLTKVKFIWNNNVINITL   75 (113)
T ss_pred             eEEEEEEEecccc--cCceEEEEEEcCCCCc-cceEEE---eeeecCCCEEEEEEEccCCCCCEEEEEEEEeCCccCCCC
Confidence            5999998776544  8899999999999984 555553   246999999999995 577799999999998641     


Q ss_pred             -CceeeEEEEEeC-CCCeEEEEcCe
Q 031056          122 -GWKPESVKICGQ-NIRTVTFFYNT  144 (166)
Q Consensus       122 -~W~~e~V~V~~~-~~~~~~F~cnr  144 (166)
                       .=+.++|.|+.. +++++.| |-+
T Consensus        76 p~~~~~~I~Vq~Ge~~~~~~F-C~~   99 (113)
T cd01759          76 PKVGAEKITVQSGKDGKVFNF-CSS   99 (113)
T ss_pred             CeEEEEEEEEEeCCCccEEEE-CCC
Confidence             223799999976 5566666 443

Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=97.22  E-value=0.0032  Score=57.61  Aligned_cols=113  Identities=16%  Similarity=0.163  Sum_probs=81.9

Q ss_pred             CCCceEEEEEEcCCCCC-CcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcCCC
Q 031056           44 AKSCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSGSD  121 (166)
Q Consensus        44 ~~~c~Y~V~V~TG~~~~-AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~L~hdG~d  121 (166)
                      -....|+|+|....... .+++..+.|.|+|..|++ ....+.   ...++.|++-+|.+. ...+|++.+|+++.++..
T Consensus       306 f~~~~y~v~v~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~---~~~~~~~~t~~~~i~~~~~~g~~~~v~~~w~~~~  381 (442)
T TIGR03230       306 YKVFHYQVKVHFFGKTSLSHTDQPMKISLYGTHGEK-ENIPFT---LPEVSTNKTYSFLITTDVDIGELLMVKLKWEKDT  381 (442)
T ss_pred             ceEEEEEEEEEEeccccccccCCcEEEEEEcCCCCc-cceEEe---eeeecCCCeEEEEEecccCCCceEEEEEEEeCCC
Confidence            44567999999886544 478899999999999974 444443   246999999999995 567799999999998653


Q ss_pred             --Cce---------eeEEEEEeC-CCCeEEEEcCe------ecCCCceeeecCCCCCC
Q 031056          122 --GWK---------PESVKICGQ-NIRTVTFFYNT------FIPDGVWFGFNQCRRGS  161 (166)
Q Consensus       122 --~W~---------~e~V~V~~~-~~~~~~F~cnr------WL~~~~~~~~~~C~~~~  161 (166)
                        .|.         .++|+|+.. +.+++.| |-+      =+..+.-..+=.|....
T Consensus       382 ~~~~~~~~~~~~~~~~~i~v~~ge~~~~~~f-c~~~~~~~~~~~~~~~~~~~~~~~~~  438 (442)
T TIGR03230       382 YISWSDWWSSPGFHIRKLRIKSGETQSKVIF-SAKEGEFSYLQRGGEAAVFVKCKEKS  438 (442)
T ss_pred             cccchhhhcCCceeEEEEEEEeCCCccEEEE-CCCCCCcceeccCCcceeEEeecccc
Confidence              776         889999966 5666776 422      22233444466676544

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins

Probab=86.80  E-value=6.2  Score=30.86  Aligned_cols=52  Identities=12%  Similarity=0.100  Sum_probs=39.7

Q ss_pred             ceeEee--c-CCCCCeEEEEEEEcCCCCceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031056           98 DTFQIS--G-PCTYDICYQYLLRSGSDGWKPESVKICGQ-NIRTVTFFYNTFIPDG  149 (166)
Q Consensus        98 DtF~v~--~-~~lG~Ic~l~L~hdG~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~  149 (166)
                      ..|.+.  . ...|.+=.+.|.-.=..--|++.|++.+. ...+.+|.||.|+...
T Consensus        70 ~~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~  125 (137)
T cd01751          70 SAYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPK  125 (137)
T ss_pred             eEEEEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccC
Confidence            378763  2 44588888877755556999999999865 4478999999999854

Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	1e-08
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	7e-05
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	1e-04
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	2e-04

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 8/123 (6%)

Query: 45  KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG 104
               Y + ++T     + T   +S+      G E     LD  +   FES  TDT+  SG
Sbjct: 18  HHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSG 77

Query: 105 PCTYDICYQYLLRSG---SDGWKPESVKICGQNIRTVT-----FFYNTFIPDGVWFGFNQ 156
               +I    L  +G      W    V I   +  T       F    ++   +     +
Sbjct: 78  VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQLVVYEGK 137

Query: 157 CRR 159
              
Sbjct: 138 AIL 140

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 11/117 (9%)

Query: 49  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 108
           Y V ++T     + T   I++    A G      +LD     +FE+ S + + + G    
Sbjct: 9   YNVEVETGDREHAGTDATITIRITGAKG-RTDYLKLDKG---SFEAGSKEQYTVQGFDVG 64

Query: 109 DICY------QYLLRSGSDGWKPESVKICG-QNIRTVTFFYNTFIPDGVWFGFNQCR 158
           DI             SG   W    V I      R  +F    ++   +     +  
Sbjct: 65  DIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEAT 121

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Length = 370

 Score = 40.0 bits (92), Expect = 1e-04
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 36  KTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESC 95
               +          V+IKT+    + T + I        G       LD+P +  F   
Sbjct: 245 NKDAVDKDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDG-VKEEWALDNPGND-FTRN 302

Query: 96  STDTFQISGPCTY----DICYQYLLRSG----SDGWKPESVKICGQNIRTVTFFYNTFIP 147
              T+ +          DI   ++        +DGWKP  VK+   +   +    N +I 
Sbjct: 303 QEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDKVRLEKNINEWIS 362

Query: 148 DG 149
            G
Sbjct: 363 GG 364

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Length = 370

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 24/122 (19%), Positives = 39/122 (31%), Gaps = 10/122 (8%)

Query: 36  KTVQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESC 95
           +     V          I TS    + T D +        G +     +D+P +  F + 
Sbjct: 245 EGNDPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDG-KTQEWEMDNPGND-FMTG 302

Query: 96  STDTFQISGP---CTYDICYQYLLR-----SGSDGWKPESVKICGQNIRTVTFFYNTFIP 147
           S DT+           D      +R     +  D +KPE++KI       V    N +I 
Sbjct: 303 SKDTYTFKLKDENLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIANGKVVVDKDINEWIS 362

Query: 148 DG 149
             
Sbjct: 363 GN 364

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.95
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.93
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.93
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.92
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.91
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.9
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.88
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.87
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	99.17
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	99.17
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	99.12
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	99.05
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	98.94
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	96.88

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.95  E-value=5.4e-28  Score=226.35  Aligned_cols=116  Identities=20%  Similarity=0.194  Sum_probs=102.4

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  120 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~--  120 (166)
                      ..++|.|+|+|+||++.+|||||+|+|+|+|++|+++....|+++++++||||++|+|.+.+.++|+|++|+||||+.  
T Consensus        16 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~~L~~~~~~~FeRGs~D~F~v~~~~LG~L~~IrI~hDnsG~   95 (698)
T 3vf1_A           16 HHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGVDVGEIAMITLKENGFGL   95 (698)
T ss_dssp             ---CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCEEECCBCSSSSCCCCEEEEEEEECCCSSEEEEEEEECCCSS
T ss_pred             CCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecceEeCCCCCCccccCCeeEEEEEecccCCceEEEEEECCCCC
Confidence            467899999999999999999999999999999984678899999999999999999999889999999999999965  


Q ss_pred             -CCceeeEEEEEeC-C----CCeEEEEcCeecCCCceeeecCCC
Q 031056          121 -DGWKPESVKICGQ-N----IRTVTFFYNTFIPDGVWFGFNQCR  158 (166)
Q Consensus       121 -d~W~~e~V~V~~~-~----~~~~~F~cnrWL~~~~~~~~~~C~  158 (166)
                       ++|||++|+|+++ +    ++++.|+|+|||+.++..-...|.
T Consensus        96 ~~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d~~l~~G~a~  139 (698)
T 3vf1_A           96 KSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQLVVYEGKAI  139 (698)
T ss_dssp             BCCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSEEEEECSSCC
T ss_pred             CCCeEEeEEEEEcCCCCCCCCcEEEEEhhhcccCCcEecCCcee
Confidence             3999999999988 4    789999999999998554444444

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.93  E-value=7.1e-26  Score=211.84  Aligned_cols=103  Identities=18%  Similarity=0.222  Sum_probs=91.5

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC-
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS-  120 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~-  120 (166)
                      ..++|.|+|+|+||++.+|||||+|+|+|+|++|+ +....|++   ++||||++|+|.++. .++|+|++|+||||+. 
T Consensus        18 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~-S~~~~L~~---~~FeRG~~D~F~v~~~~~LG~L~~IrI~hDnsG   93 (691)
T 3v98_A           18 GSHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGC-SEKHLLDK---GSFERGAVDSYDVTVDEELGEIQLVRIEKRKYG   93 (691)
T ss_dssp             -----CEEEEEEECCSTTCCBCSEEEEEEEESSCB-CCCEECCS---SCBCTTCEEEEEECCSSCCCSEEEEEEEEECSS
T ss_pred             CCCceeEEEEEEECCCCCCCCCceeEEEEEECCCc-eeeEEecC---CcccCCCeeEEEEEeccCCCCceEEEEEECCCC
Confidence            46799999999999999999999999999999997 56788976   899999999999988 6679999999999954 


Q ss_pred             -C-CceeeEEEEEeCCCCeEEEEcCeecCCC
Q 031056          121 -D-GWKPESVKICGQNIRTVTFFYNTFIPDG  149 (166)
Q Consensus       121 -d-~W~~e~V~V~~~~~~~~~F~cnrWL~~~  149 (166)
                       + +|||++|+|+++.++.+.|+|+|||+.+
T Consensus        94 ~~~~Wfl~~V~V~~~~g~~~~Fpc~rWL~~d  124 (691)
T 3v98_A           94 SNDDWYLKYITLKTPHGDYIEFPCYRWITGD  124 (691)
T ss_dssp             SCCCEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred             CCCCeEEeEEEEECCCCcEEEEehHHhcCCC
Confidence             3 9999999999988899999999999987

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.93  E-value=1.5e-25  Score=217.39  Aligned_cols=114  Identities=21%  Similarity=0.259  Sum_probs=93.8

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  120 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~--  120 (166)
                      ...++.|+|+|+||++.+|||||+|+|+|+|++|+ +....|+++++++||||++|+|.+++.++|+|++|+||||+.  
T Consensus       370 ~~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~-S~~~~L~~~~~~~FeRGs~d~F~v~~~~LG~L~~IrI~hDnsG~  448 (1066)
T 3dy5_A          370 AGQNAIYNVEVETGDREHAGTDATITIRITGAKGR-TDYLKLDKWFHNDFEAGSKEQYTVQGFDVGDIQLIELHSDGGGY  448 (1066)
T ss_dssp             ---CCEEEEEEEECCSTTCCCCSCCEEEEEESSCB-CCCEEC-------CCTTCEEEEEEECSCCSSEEEEEEECCCCC-
T ss_pred             ccCceeEEEEEEECCCCCCCCCceeEEEEEECCCc-eeeEEeCCCCcCccccCCcceEEEEEecCCCceEEEEEECCCCC
Confidence            44689999999999999999999999999999997 578899999989999999999999887789999999999943  


Q ss_pred             ---C-CceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          121 ---D-GWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       121 ---d-~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                         + +|||++|+|+++ +++.+.|+|+|||+.++..-...|
T Consensus       449 ~~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d~~lr~G~a  490 (1066)
T 3dy5_A          449 WSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEA  490 (1066)
T ss_dssp             -CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSEEEECCSSC
T ss_pred             CCCCCCeEEeEEEEEeCCCCCEEEEehhhhccCCeEeccCce
Confidence               3 999999999999 699999999999999844433333

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.92  E-value=9.5e-25  Score=204.38  Aligned_cols=107  Identities=21%  Similarity=0.251  Sum_probs=95.4

Q ss_pred             CCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC---
Q 031056           44 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---  120 (166)
Q Consensus        44 ~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~---  120 (166)
                      +...-|.|+|+||++.+|||||+|+|+|+|++|. +....|++   ++||||++|+|.+++.++|+|++|+||||+.   
T Consensus         4 ~~~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~-S~~~~L~~---~~FeRGs~d~F~v~~~dLG~L~~IrI~hDnsg~G   79 (696)
T 3fg1_A            4 HHHAIYNVEVETGDREHAGTDATITIRITGAKGR-TDYLKLDK---GSFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYW   79 (696)
T ss_dssp             -CEEEEEEEEEECSSTTCCBCSCEEEEEEETTEE-CCCEEECS---SCBCTTCEEEEEEEEECCSSEEEEEEEECCCCTT
T ss_pred             cccceeeEEEEeCCCCCCCCCceeEEEEEECCCc-eeeEEeCC---CCcCCCCccEEEEEEccCCCceEEEEEECCcCCC
Confidence            3456799999999999999999999999999997 57788976   8999999999999887789999999999965   


Q ss_pred             --C-CceeeEEEEEeC-CCCeEEEEcCeecCCCceeee
Q 031056          121 --D-GWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGF  154 (166)
Q Consensus       121 --d-~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~  154 (166)
                        + +|||++|+|+++ +++.+.|+|+|||+.++..-.
T Consensus        80 ~~~~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~dl~lre  117 (696)
T 3fg1_A           80 SGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFP  117 (696)
T ss_dssp             CSCCCEEEEEEEEEETTCSSCEEEEEEEEESSEEEECC
T ss_pred             CCCCCeEeeEEEEEeCCCCcEEEeEhhhhccCCeEecC
Confidence              4 999999999999 699999999999999843333

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.91  E-value=4.5e-24  Score=198.89  Aligned_cols=96  Identities=13%  Similarity=0.125  Sum_probs=87.2

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC---CCc
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS---DGW  123 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~---d~W  123 (166)
                      .|+|+|+||++++|||||+|+|+|+|++|++ ....|+     +||||++|+|.+.. .++|+|++|+||||+.   ++|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s-~~~~L~-----~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~g~~~~W   75 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEV-ELGSCL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEE-EEEEEE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCc-cCeeCC-----CcCCCCccEEEEEecCCCCcceEEEEEeCCCCCCCCc
Confidence            6999999999999999999999999999975 566785     89999999999987 5569999999999965   499


Q ss_pred             eeeEEEEEeCC--CCeEEEEcCeecCCC
Q 031056          124 KPESVKICGQN--IRTVTFFYNTFIPDG  149 (166)
Q Consensus       124 ~~e~V~V~~~~--~~~~~F~cnrWL~~~  149 (166)
                      ||++|+|++++  ++.+.|+|||||+.+
T Consensus        76 fl~~V~V~~p~~~g~~~~F~Cn~WL~~~  103 (662)
T 1lox_A           76 FCNWISVQALGAAEDKYWFPCYRWVVGD  103 (662)
T ss_dssp             EEEEEEEEESSSCCCCEEEEEEEEECSS
T ss_pred             EEeEEEEecCCCCCcEEEEEeceEecCC
Confidence            99999999985  777999999999973

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.90  E-value=1.1e-23  Score=185.89  Aligned_cols=96  Identities=14%  Similarity=0.120  Sum_probs=85.9

Q ss_pred             CCCceEEEEEEcCCCCC-CcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--
Q 031056           44 AKSCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  120 (166)
Q Consensus        44 ~~~c~Y~V~V~TG~~~~-AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~lG~Ic~l~L~hdG~--  120 (166)
                      ..++.|+|+|+||++.+ |||||+|+|+|+|++|++ ....|+++         +|.|.+...++|+|++|+||||+.  
T Consensus       245 tt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S-~~~~L~~~---------~d~F~v~~~~LG~L~~I~I~HDnsG~  314 (384)
T 3cwz_B          245 TILIPYHILIVPSKKLGGSMFTANPWICISGELGET-QILQIPRN---------VLEMTFECQNLGKLTTVQIGHDNSGL  314 (384)
T ss_dssp             TSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBC-CCEECCTT---------CCEEEEEEECCCSEEEEEEEECCCSS
T ss_pred             ccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCc-ccEEeccc---------CceEEEecccCCCceEEEEEECCCCC
Confidence            46789999999999998 699999999999999974 67778653         689999988999999999999954  


Q ss_pred             C-CceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031056          121 D-GWKPESVKICGQ-NIRTVTFFYNTFIPDG  149 (166)
Q Consensus       121 d-~W~~e~V~V~~~-~~~~~~F~cnrWL~~~  149 (166)
                      + +|||++|+|+++ +++.+.|||+|||+.+
T Consensus       315 ~p~Wfl~~V~V~d~~tg~~~~Fpc~rWL~~d  345 (384)
T 3cwz_B          315 YAKWLVECVMVRNEVTGHTYKFPCGRWLGKG  345 (384)
T ss_dssp             CCCEEEEEEEEEETTTCCEEEEEEEEEESTT
T ss_pred             CCceeEeEEEEEeCCCCcEEEEECceeCCCC
Confidence            3 999999999998 7899999999999954

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.88  E-value=3.7e-22  Score=175.30  Aligned_cols=105  Identities=22%  Similarity=0.224  Sum_probs=93.2

Q ss_pred             CCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec---C-CCCCeEEEEEEEcCC
Q 031056           45 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG---P-CTYDICYQYLLRSGS  120 (166)
Q Consensus        45 ~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~---~-~lG~Ic~l~L~hdG~  120 (166)
                      .--.|+|+|+||+..+|||+++|+|.|.|.+|.+ ....||+++ ++||||++|+|.|..   . .+|+|..|+|+++..
T Consensus       254 ~~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges-~~~~LD~~g-ndFe~G~~d~y~v~~~~~~~~lg~l~~v~l~K~~~  331 (370)
T 2wxu_A          254 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKY  331 (370)
T ss_dssp             CCCEEEEEEEECCSTTCSCCSEEEEEEEETTCCE-EEEECCCSS-CTTCTTCEEEEEEECSCTTCCGGGEEEEEEEEECS
T ss_pred             cceeEEEEEEcCCcccCCCcceEEEEEEcCCCcc-chhhhhCcC-CCcCCCCeeeEEEecCCCccCcCceEEEEEEccCC
Confidence            4457999999999999999999999999999975 566799965 999999999999976   3 459999999999854


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCce
Q 031056          121 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVW  151 (166)
Q Consensus       121 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~  151 (166)
                          |+|||++|+|+.|.+..+.|||||||.++.-
T Consensus       332 ~~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~~~  366 (370)
T 2wxu_A          332 TAFPDAYKPENIKIIANGKVVVDKDINEWISGNST  366 (370)
T ss_dssp             SSSCCCBCEEEEEEEETTEEEEEEECCSCBCTTCE
T ss_pred             CCCCccceeeeEEEEcCCCcEEEeccceeeeCCeE
Confidence                7999999999999988899999999987643

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.87  E-value=4.8e-22  Score=174.62  Aligned_cols=105  Identities=23%  Similarity=0.259  Sum_probs=93.5

Q ss_pred             CCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec----CCCCCeEEEEEEEcCC
Q 031056           45 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG----PCTYDICYQYLLRSGS  120 (166)
Q Consensus        45 ~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~----~~lG~Ic~l~L~hdG~  120 (166)
                      .--.|+|+|+||+..+|||+++|+|.|.|.+|.+ ....||+++ ++||||++|+|.|..    ..+|+|..|+|.+...
T Consensus       254 ~~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges-~~~~LD~~g-ndFe~G~~d~y~v~~~~~~~dlg~l~~v~l~K~~~  331 (370)
T 1olp_A          254 DLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVK-EEWALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKL  331 (370)
T ss_dssp             CCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCE-EEEECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             ccceEEEEEEcCCcccCCCcceEEEEEEcCCCcc-chhhhhCcC-CccCCCCeeEEEEeccCCcCCcCceEEEEEEcCCC
Confidence            4457999999999999999999999999999975 566799965 999999999999977    4569999999988854


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCce
Q 031056          121 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVW  151 (166)
Q Consensus       121 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~  151 (166)
                          |+|||++|+|+.|.+..+.|||||||.++.-
T Consensus       332 ~~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~~~  366 (370)
T 1olp_A          332 TVATDGWKPSYVKVIAGDKVRLEKNINEWISGGTT  366 (370)
T ss_dssp             SSSCCEECEEEEEEEETTEEEEEEECCSCEETTEE
T ss_pred             CCCCccceeeeEEEEcCCCcEEEeccceeeeCceE
Confidence                7999999999999988899999999987643

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=99.17  E-value=1e-10  Score=103.63  Aligned_cols=109  Identities=12%  Similarity=0.079  Sum_probs=88.7

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcCC
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSGS  120 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~-L~hdG~  120 (166)
                      .-....|+|+|+|+.  .++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||++.
T Consensus       336 Pf~~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~  409 (452)
T 1bu8_A          336 NFTRWRYKVSVTLSG--AKKLSGYILVALYGNNGNS-KQYEIFKG---SLKPEARHVRDIDVDINVGEIQKVKFLWNNKV  409 (452)
T ss_dssp             TCCCEEEEEEEEEEC--SSCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEC--
T ss_pred             CCcceeeEEEEEEcC--CCceeeEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEeCCCCCCCceEEEEEEECCC
Confidence            345678999999965  5799999999999999975 45555433   5999999999995 57889999999 899832


Q ss_pred             -----CCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          121 -----DGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       121 -----d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                           ..|++++|+|++. +++++.|=+++|+.+++-....-|
T Consensus       410 ~~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          410 INLFRPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             ----CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                 4999999999987 788999999999998865544433

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=99.17  E-value=9.3e-11  Score=104.41  Aligned_cols=108  Identities=13%  Similarity=0.074  Sum_probs=89.0

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC-
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG-  119 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~-L~hdG-  119 (166)
                      .-....|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +|+++ 
T Consensus       335 Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~t~s~li~~~~dlG~l~~v~~~W~~~~  407 (450)
T 1rp1_A          335 NFARWRYGVSITLSG---KRATGQAKVALFGSKGNT-HQFNIFKG---ILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNV  407 (450)
T ss_dssp             CCCCEEEEEEEEEEE---SCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCSSEEEEEEEEEEC-
T ss_pred             CcccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCC
Confidence            345678999999997   899999999999999974 45556433   6999999999995 57789999999 88883 


Q ss_pred             ----CCCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          120 ----SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       120 ----~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                          ...|++++|+|++. +++++.|=+++|+.+++-....-|
T Consensus       408 ~~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          408 VNPTFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             -CTTCCCEEEEEEEEEETTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                24999999999987 778899999999998865544443

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=99.12  E-value=2e-10  Score=102.27  Aligned_cols=98  Identities=9%  Similarity=-0.010  Sum_probs=79.7

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC-
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG-  119 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~-L~hdG-  119 (166)
                      .-..+.|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +|++. 
T Consensus       335 Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~  407 (449)
T 1hpl_A          335 NFARWRYRVDVTLSG---KKVTGHVLVSLFGNKGNS-RQYEIFQG---TLKPDNTYSNEFDSDVEVGDLEKVKFIWYNNV  407 (449)
T ss_dssp             SCCCEEEEEEEEEEE---CCEEEEEEEEEEETTEEC-CCEEEEEE---EECSSCEEEEEEEESSCCCSEEEEEEEEEECS
T ss_pred             CcccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEECCC
Confidence            345678999999997   899999999999999975 45566433   6999999999995 57789999999 88883 


Q ss_pred             ----CCCceeeEEEEEeCCCCeEEEEcCeecCC
Q 031056          120 ----SDGWKPESVKICGQNIRTVTFFYNTFIPD  148 (166)
Q Consensus       120 ----~d~W~~e~V~V~~~~~~~~~F~cnrWL~~  148 (166)
                          ...|++++|+|++.+++++.| |++|+-.
T Consensus       408 ~~~~~p~~~i~~I~V~~e~~~~~~f-C~~~~~~  439 (449)
T 1hpl_A          408 INLTLPKVGASKITVERNDGSVFNF-CSEETVR  439 (449)
T ss_dssp             CCTTCCCEEEEEEEEECTTSCEEEE-ECCCCBC
T ss_pred             CCCCCCeEEEEEEEEEeCCCCeeee-cCCCccc
Confidence                249999999999933445555 9999764

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=99.05  E-value=7e-10  Score=97.33  Aligned_cols=103  Identities=12%  Similarity=0.034  Sum_probs=82.1

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcCC
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSGS  120 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~-L~hdG~  120 (166)
                      .-....|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+..
T Consensus       318 pf~~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~~lG~l~~v~~~W~~~~  390 (432)
T 1gpl_A          318 NFTRWRYKVSVTLSG---KKVTGHILVSLFGNKGNS-KQYEIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNV  390 (432)
T ss_dssp             TCCCEEEEEEEEEEE---CCEEEEEEEEEEESSCEE-EEEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESS
T ss_pred             CCccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEEcCC
Confidence            345678999999997   899999999999999975 55666543   5999999999995 57889999999 899831


Q ss_pred             -----CCceeeEEEEEeCCCCeEEEEcCe-ecCCCceee
Q 031056          121 -----DGWKPESVKICGQNIRTVTFFYNT-FIPDGVWFG  153 (166)
Q Consensus       121 -----d~W~~e~V~V~~~~~~~~~F~cnr-WL~~~~~~~  153 (166)
                           ..|++++|+|++...+. .|.|.+ .+.+++-..
T Consensus       391 ~~~~~~~~~i~~I~v~~~e~~~-~~fC~~~~~~~~~~~~  428 (432)
T 1gpl_A          391 INPTLPRVGASKIIVETNVGKQ-FNFCSPETVREEVLLT  428 (432)
T ss_dssp             CCTTCCEEEEEEEEEECTTSCE-EEEECSCCEETTCCEE
T ss_pred             CCCCCCeEEEEEEEEEeCCCCC-ceecCCCccccCceec
Confidence                 39999999999885555 777854 555554433

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=98.94  E-value=7.4e-11  Score=104.62  Aligned_cols=107  Identities=11%  Similarity=0.054  Sum_probs=88.4

Q ss_pred             cCCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC-
Q 031056           43 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG-  119 (166)
Q Consensus        43 ~~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~-~~~lG~Ic~l~-L~hdG-  119 (166)
                      .-..+.|+|+|+|+.  .++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+. 
T Consensus       336 Pf~~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~  409 (452)
T 1w52_X          336 DYTSWRYRVSITLAG--SGKANGYLKVTLRGSNGNS-KQYEIFKG---SLQPDSSYTLDVDVNFIIGKIQEVKFVWNKTV  409 (452)
T ss_dssp             TCCCEEEEECCBCCS--SSCCEECBCCCBCCSSCCC-CCCCCCCE---ECCSSCCCCEEEEESSCCCCCCCBCCCBCCSS
T ss_pred             CccceeeEEEEEEcC--CcceeeEEEEEEEcCCCCc-ceEecccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCC
Confidence            345678999999985  5799999999999999985 55566543   6999999999995 57789999999 88883 


Q ss_pred             ----CCCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeec
Q 031056          120 ----SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFN  155 (166)
Q Consensus       120 ----~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~  155 (166)
                          ...|++++|+|++. +++++.|=+++|+.+++-....
T Consensus       410 ~~~~~~~~~i~~I~V~~~e~~~~~~fC~~~~~~~~~~~~~~  450 (452)
T 1w52_X          410 LNLSKPQLGASRITVQSGADGTEYKFCGSGTVQDNVEQSLY  450 (452)
T ss_dssp             CCSCCCCCCCSBCCCCBSSSCCCCCEECCSCCCSSCCCCCE
T ss_pred             CCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceeccc
Confidence                24999999999987 7788999999999987554443

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=96.88  E-value=0.0073  Score=58.00  Aligned_cols=81  Identities=14%  Similarity=0.076  Sum_probs=55.2

Q ss_pred             eEEEEEEeC----CCC--eEEEEcCCCcCCC-cccCCCcceeEe--ec-CCCCCeEEEEEEEcCCCCceeeEEEEEe-CC
Q 031056           66 KISLAFGDA----YGN--EVYIKRLDDPYSR-TFESCSTDTFQI--SG-PCTYDICYQYLLRSGSDGWKPESVKICG-QN  134 (166)
Q Consensus        66 ~V~I~L~g~----~G~--~s~~~~Ld~~~~~-~FErGsvDtF~v--~~-~~lG~Ic~l~L~hdG~d~W~~e~V~V~~-~~  134 (166)
                      +|++.|+.+    .|.  .+....|++.... ..+.| ...|.+  .. +.+|++-.++|.....+.|||++|+|++ |+
T Consensus        55 ~v~lqlvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~  133 (853)
T 2iuj_A           55 SISIQLISATKADGGKGKVGKATNLRGKITLPTIGAK-EEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPN  133 (853)
T ss_dssp             SEEEEEEEEEEESSSSEEEEEEEECCCCCCCSSCCTT-EEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTT
T ss_pred             eEEEEEEEeeeCCCCCcccCCccccccccCCCCCCCC-ceEEEEEeeccccCCCceEEEEEecCCccceEeEEEEeecCC
Confidence            477777654    342  2234456543321 13333 457888  33 5569999999977666899999999997 55


Q ss_pred             -CCeEEEEcCeecCC
Q 031056          135 -IRTVTFFYNTFIPD  148 (166)
Q Consensus       135 -~~~~~F~cnrWL~~  148 (166)
                       +. .+|+||+|+..
T Consensus       134 ~g~-~~F~c~sWv~~  147 (853)
T 2iuj_A          134 HGT-IHFICNSWVYN  147 (853)
T ss_dssp             SCC-EEEEEEEEECB
T ss_pred             CCc-EEEEecccccC
Confidence             55 88999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	166
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	0.003

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 12/101 (11%)

Query: 49  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 108
           Y V + T  S  + +++K+ L     +G                     + F+++     
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVELGSC------LRPTRNKEEEFKVNVSKYL 56

Query: 109 DICYQYLLRSG----SDGWKPESVKIC--GQNIRTVTFFYN 143
                  LR       D W    + +   G       F   
Sbjct: 57  GSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKYWFPCY 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.96
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.96
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.96
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	99.88
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	99.88
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	99.78
d3bnea2	143	Plant lipoxigenase {Soybean (Glycine max), isozyme	86.86

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.96  E-value=5.2e-29  Score=186.26  Aligned_cols=106  Identities=21%  Similarity=0.235  Sum_probs=94.8

Q ss_pred             CCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCC----CCCeEEEEEEEcCC
Q 031056           45 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSGS  120 (166)
Q Consensus        45 ~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~----lG~Ic~l~L~hdG~  120 (166)
                      +--.|.|.|+||++++|||||+|+|+|+|++|+ +....|+++. +.||||++|+|.+..++    +|+|.+|+|+||+.
T Consensus         5 ~~~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~-s~~~~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~ki~i~hd~~   82 (121)
T d1ca1a2           5 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGK-TQEWEMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKY   82 (121)
T ss_dssp             CCCEEEEEEEECCSTTCCCCSEEEEEEEETTSC-EEEEECCCSS-SCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             cceeEEEEEEeCCCCCCCCCCeEEEEEEeCCCC-eeeEEecCCC-ccccCCcEEEEEEEeCCcCCCcCCceEEEEEEcCc
Confidence            455799999999999999999999999999997 5788998875 78999999999998754    79999999999943


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCcee
Q 031056          121 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVWF  152 (166)
Q Consensus       121 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~  152 (166)
                          ++|||++|+|..++++.+.|+|||||+++..|
T Consensus        83 g~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1ca1a2          83 TAFPDAYKPENIKVIANGKVVVDKDINEWISGNSTY  118 (121)
T ss_dssp             SSSCCCBCEEEEEEEETTEEEEEEECCSCBCSSCEE
T ss_pred             cccCchhheEEEEEECCCCeEEEeECCEEECCCCEE
Confidence                37999999998778889999999999998655

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.96  E-value=3.1e-29  Score=187.35  Aligned_cols=107  Identities=21%  Similarity=0.240  Sum_probs=94.6

Q ss_pred             CCCceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecCC----CCCeEEEEEEEcC
Q 031056           44 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSG  119 (166)
Q Consensus        44 ~~~c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~~----lG~Ic~l~L~hdG  119 (166)
                      .+...|.|+|+||+.++|||||+|+|+|+|++|+ +....|+++. +.||||++|+|.+..++    +|+|.+|+|+||+
T Consensus         4 ~~~~~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~-s~~~~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~~i~i~hd~   81 (121)
T d1olpa2           4 YDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGV-KEEWALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEK   81 (121)
T ss_dssp             CCCSEEEEEEEECSSTTCCCCSEEEEEEEETTCC-EEEEECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEEC
T ss_pred             ccccEEEEEEEECCCCCCCCcceEEEEEEECCCC-cccEEecCCC-cccccCCeEEEEEEeCCccCCcCceEEEEEEEcC
Confidence            3556899999999999999999999999999997 5777898875 88999999999998654    7999999999994


Q ss_pred             C---C-CceeeEEEEEeCCCCeEEEEcCeecCCCcee
Q 031056          120 S---D-GWKPESVKICGQNIRTVTFFYNTFIPDGVWF  152 (166)
Q Consensus       120 ~---d-~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~  152 (166)
                      .   + +|||++|+|..++++.+.|+|||||+++..|
T Consensus        82 ~g~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1olpa2          82 LTVATDGWKPSYVKVIAGDKVRLEKNINEWISGGTTY  118 (121)
T ss_dssp             SSSSCCEECEEEEEEEETTEEEEEEECCSCEETTEEE
T ss_pred             CCCCCcceeEEEEEEECCCCeEEEEECCEEECCCcEE
Confidence            2   3 6999999998777889999999999998655

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=1.5e-28  Score=180.41  Aligned_cols=96  Identities=13%  Similarity=0.132  Sum_probs=85.9

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeecC-CCCCeEEEEEEEcCC---CCc
Q 031056           48 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGS---DGW  123 (166)
Q Consensus        48 ~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~~-~lG~Ic~l~L~hdG~---d~W  123 (166)
                      .|+|+|+||+.++|||||+|+|+|+|++|.+ ...+|     +.||||++|+|.+... .+|+|++|+|+||+.   ++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s-~~~~l-----~~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~g~~~~W   75 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEV-ELGSC-----LRPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEE-EEEEE-----ECCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCC-CCcCc-----cccccCcEEEEEEEeeccccceEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999974 55566     3599999999999874 689999999999964   399


Q ss_pred             eeeEEEEEeC--CCCeEEEEcCeecCCC
Q 031056          124 KPESVKICGQ--NIRTVTFFYNTFIPDG  149 (166)
Q Consensus       124 ~~e~V~V~~~--~~~~~~F~cnrWL~~~  149 (166)
                      ||++|+|+++  +++.+.|||||||+++
T Consensus        76 ~l~~V~V~~~~~~~~~~~Fpc~~Wl~~d  103 (111)
T d2p0ma2          76 FCNWISVQALGAAEDKYWFPCYRWVVGD  103 (111)
T ss_dssp             EEEEEEEEESSSSCCCEEEEEEEEECSS
T ss_pred             EEEEEEEEecCCCCeEEEEEcCceECCC
Confidence            9999999986  6788999999999876

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.88  E-value=6.5e-23  Score=150.79  Aligned_cols=104  Identities=13%  Similarity=0.133  Sum_probs=88.7

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcC--CC-C
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSG--SD-G  122 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG--~d-~  122 (166)
                      ..|+|+|+||   +|||+|+|+|+|+|++|+ +....|.   ++.||||++|+|.+.. .++|+|.+|+||||.  .+ +
T Consensus         2 ~rY~V~V~t~---gagT~a~v~i~L~G~~g~-t~~~~l~---~~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn~g~~~~   74 (113)
T d1rp1a1           2 WRYGVSITLS---GKRATGQAKVALFGSKGN-THQFNIF---KGILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNPT   74 (113)
T ss_dssp             EEEEEEEEEE---ESCEEEEEEEEEEETTEE-CCCEEEE---EEEECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CTT
T ss_pred             eEEEEEEEEC---CCCccceEEEEEEcCCCC-cccEEEc---ceeEcCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCc
Confidence            5799999998   799999999999999997 4677773   3579999999999975 689999999999994  34 7


Q ss_pred             c---eeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          123 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       123 W---~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                      |   ++++|+|++. +++.+.|.+++|+.+++...-.-|
T Consensus        75 w~~~~v~~V~V~~~~~g~~~~Fc~~~~v~~~v~~~l~pc  113 (113)
T d1rp1a1          75 FPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  113 (113)
T ss_dssp             CCCEEEEEEEEEETTCSSC-EEECSCEECTTCCEEEEEC
T ss_pred             cccceeEEEEEEcCCCCcEEEECcCceEccCceeccccC
Confidence            7   9999999988 889999999999999976654444

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=1e-22  Score=149.63  Aligned_cols=105  Identities=12%  Similarity=0.086  Sum_probs=88.6

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-C
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-G  122 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG~--d-~  122 (166)
                      ..|+|+|+||+.  +||+|+|+|+|+|++|+ +....|.   ++.||||++|+|.+.. .++|+|.+|+||||+.  + +
T Consensus         2 ~rY~V~V~t~~~--~gT~~~V~i~L~G~~G~-s~~~~l~---~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn~g~~~~   75 (114)
T d1bu8a1           2 WRYKVSVTLSGA--KKLSGYILVALYGNNGN-SKQYEIF---KGSLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINLF   75 (114)
T ss_dssp             EEEEEEEEEECS--SCEEEEEEEEEEETTEE-CCCEEEE---EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC------
T ss_pred             cEEEEEEEECCC--CCcCceEEEEEEeCCCC-cccCccc---hhhccCCCceEEEEecCcCCCCcEEEEEEECCCcCCCc
Confidence            579999999975  59999999999999996 4667773   3679999999999986 5889999999999954  3 7


Q ss_pred             c---eeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031056          123 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  157 (166)
Q Consensus       123 W---~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  157 (166)
                      |   ++++|+|++. +++.|.|.+++|+.+++...---|
T Consensus        76 W~~~~l~~V~V~~~~~g~~~~Fc~~~~v~~~~~~~l~~c  114 (114)
T d1bu8a1          76 RPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  114 (114)
T ss_dssp             CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             ccccceEEEEEEeCCCCCEEEEecCceEcCCceeecccC
Confidence            7   6999999988 889999999999999976654444

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.78  E-value=6.1e-19  Score=129.77  Aligned_cols=93  Identities=12%  Similarity=0.044  Sum_probs=81.0

Q ss_pred             ceEEEEEEcCCCCCCcCceeEEEEEEeCCCCeEEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcC--CC-C
Q 031056           47 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSG--SD-G  122 (166)
Q Consensus        47 c~Y~V~V~TG~~~~AGTda~V~I~L~g~~G~~s~~~~Ld~~~~~~FErGsvDtF~v~~-~~lG~Ic~l~L~hdG--~d-~  122 (166)
                      ..|+|+|+|+   ++||+++|+|.|+|++|+ +....|.+   +.||||++|+|.+.. .++|+|.+|++|||.  .+ +
T Consensus         2 ~rY~V~V~t~---g~~T~~~V~i~L~G~~G~-s~~~~L~~---~~f~~g~t~tf~i~~~~~lG~l~~v~~~hdnsg~~~~   74 (112)
T d1gpla1           2 WRYKVSVTLS---GKKVTGHILVSLFGNKGN-SKQYEIFK---GTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPT   74 (112)
T ss_dssp             EEEEEEEEEE---ECCEEEEEEEEEEESSCE-EEEEEEEE---EEECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCTT
T ss_pred             cEEEEEEEEc---CCCccceEEEEEEECCCC-cccEEEcC---ccccCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCC
Confidence            5799999997   689999999999999997 46777743   479999999999976 588999999999994  44 9


Q ss_pred             ce---eeEEEEEeCCCCeEEEEcCeecC
Q 031056          123 WK---PESVKICGQNIRTVTFFYNTFIP  147 (166)
Q Consensus       123 W~---~e~V~V~~~~~~~~~F~cnrWL~  147 (166)
                      |+   +++|+|++.+++++.| |.++.-
T Consensus        75 w~~~~~~~I~V~~g~g~~~~F-C~~~~v  101 (112)
T d1gpla1          75 LPRVGASKIIVETNVGKQFNF-CSPETV  101 (112)
T ss_dssp             CCEEEEEEEEEECTTSCEEEE-ECSCCE
T ss_pred             cccccCEEEEEECCCCeEEEe-cCcccc
Confidence            99   8999999887888888 988865

>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: Plant lipoxigenase
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=86.86  E-value=0.44  Score=34.75  Aligned_cols=53  Identities=15%  Similarity=0.098  Sum_probs=38.2

Q ss_pred             CcceeEee--c-CCCCCeEEEEEEEcCCCCceeeEEEEEeC-CCCeEEEEcCeecCC
Q 031056           96 STDTFQIS--G-PCTYDICYQYLLRSGSDGWKPESVKICGQ-NIRTVTFFYNTFIPD  148 (166)
Q Consensus        96 svDtF~v~--~-~~lG~Ic~l~L~hdG~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~  148 (166)
                      ....|.+.  - +..|.+=.+.|.-.=..--|++.|++++. +..+.+|+||.|+-.
T Consensus        71 ~~~~y~v~F~vd~~fG~PGAi~V~N~h~~EffL~sitle~~p~~g~vhF~CNSWVyp  127 (143)
T d3bnea2          71 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYN  127 (143)
T ss_dssp             TCEEEEEEECCCGGGCCEEEEEEEECSSSCEEEEEEEECCC----CEEEEEEEEECB
T ss_pred             ccEEEEEEEEecccCCCccEEEEEecCCccEEEEEEEEecCCCCcCEEEeCCCcEeE
Confidence            34567764  2 34598888888654456999999999865 546899999999964