Citrus Sinensis ID: 031098

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISVPSIPNTDW
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHcccccEEEEEEcccEEEEEccccEEEEEEcccccccEEEEEEEEEcccccEEEccHHHHHHHHHHHHHccccccccccccccccEEcccccEEEEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHcccccccEEEccccEEEEEEEEEEEcEEEEccccEEEEEEEEEEEcccccEEcccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcHEEEEEEEEccccccccc
Coil and Loop (DISEMBL)
MVEHLLQREEELLSNWWKEYAecsegprerassikksdVQASLTESVrsaelyeveeervgvpvkgglyevdlvrrhcfpvywngdnrrvlRGHWFarkggldwlpiREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEisvpsipntdw
Flexible Loop (DISEMBL)
MVEHLLQREEELLSNWWKEYAECSEgprerassikksdvqasltesvrsaelyeveeervgvpvkgglyevDLVRRHCFpvywngdnrrvLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEisvpsipntdw
Low Complexity Region (SEG)
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISVPSIPNTDW
Disordered region (IsUnstruct)
***********LLSNWWKEYA******************************LYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISV********
Disordered Region (DISOPRED)
********EEELLSNWWK********************************************PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW******************ALLQYIYFLVKWEI**********
Disordered Region (DISEMBL)
MVEHLLQREEELLSNWWKEYA***********************ESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISVPSIPNTDW
Disordered Region (DISPRO)
*VEHLLQREEELLSNWWKEYAECSE************************AELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISVPSIPN***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLVKWEISVPSIPNTDW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
P87109	757	Probable phospholipase C2	yes	no	0.849	0.186	0.294	7e-07
Q8NEL9	900	Phospholipase DDHD1 OS=Ho	yes	no	0.548	0.101	0.350	2e-06
O46606	875	Phospholipase DDHD1 OS=Bo	yes	no	0.313	0.059	0.446	6e-06
Q6NZC7	998	SEC23-interacting protein	no	no	0.512	0.085	0.347	8e-05
Q9Y6Y8	1000	SEC23-interacting protein	no	no	0.512	0.085	0.336	0.0005

>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.02 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 12/153 (7%)

Query: 4   HLLQRE----EELLSNWWKEYAECSEGPRERASSIKKSD----VQASLTESVRSAELYEV 55
           HLL R       L   W+          R   + IKK+       A  +E +  + L  V
Sbjct: 82  HLLSRSVTDAPSLRVRWFYAVDRPLRKSRTGPTEIKKAKNFLPFSAEDSEHIEKSYLKAV 141

Query: 56  EEERVGVPV---KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVA 112
           E +    PV   +  LY V++V R   P+YW+G   R+LRG WF  +G     P  E++A
Sbjct: 142 ENDGQSEPVNVNEDYLYSVNVVSRELSPIYWDGPVYRILRGTWFFSRGD-KLYPCEENLA 200

Query: 113 EQLEIAYRSQVWHRRTFNLLDFLQLELTCKALL 145
            Q+E  Y +   +R   N  D    +    ALL
Sbjct: 201 TQVEEGYLNSCPYREFSNEKDSAAAQSKTWALL 233

Probable phospholipase that hydrolyzes phosphatidic acid.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 23  CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERV-GVPVKGGLYEVDLVRRHCFP 80
           CS  GP   +      D      +S    E   VE   +  V V+GGLYEVD+ +  C+P
Sbjct: 216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275

Query: 81  VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
           VYWN  D   V+RG WF       W P+ E+ +  +E
Sbjct: 276 VYWNQADKIPVMRGQWFIDG---TWQPLEEEESNLIE 309

Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)

Query: 62  VPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
           V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF       W P+ E+ +  +E
Sbjct: 260 VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFIDG---TWQPLEEEESNLIE 312

Phospholipase that hydrolyzes phosphatidic acid.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2

 Score = 46.6 bits (109), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)

Query: 42  SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
           S+ +S+   E+Y   + + E V +   GG Y+V L  R    VYW  +   V R  WF  
Sbjct: 285 SVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWF-Y 343

Query: 99  KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
           KG  D  ++P  E+ +E+LE  Y+  V    WHRR
Sbjct: 344 KGDTDSRFIPYTEEFSEKLEAEYKKAVSTNQWHRR 378

Plays a role in the organization of endoplasmic reticulum exit sites.

Mus musculus (taxid: 10090)

>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1

 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)

Query: 42  SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
           S+ +S+   E+Y   + + E V +   GG Y+V L  R     YW  +   V R  WF  
Sbjct: 289 SVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWF-Y 347

Query: 99  KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
           KG  D  ++P  E+ +E+LE  Y+  V    WHRR
Sbjct: 348 KGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRR 382

Plays a role in the organization of endoplasmic reticulum exit sites.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
356529907	914	PREDICTED: phospholipase DDHD1-like [Gly	0.903	0.164	0.701	6e-57
225460119	963	PREDICTED: uncharacterized protein LOC10	0.753	0.129	0.803	4e-56
255569112	923	conserved hypothetical protein [Ricinus	0.753	0.135	0.818	1e-55
147864929	331	hypothetical protein VITISV_018588 [Viti	0.909	0.456	0.679	3e-55
224146261	905	predicted protein [Populus trichocarpa]	0.753	0.138	0.787	6e-53
224135773	929	predicted protein [Populus trichocarpa]	0.753	0.134	0.779	1e-51
449442116	945	PREDICTED: SEC23-interacting protein-lik	0.753	0.132	0.771	1e-51
449490252	832	PREDICTED: SEC23-interacting protein-lik	0.746	0.149	0.761	1e-50
22329893	933	protein shoot gravitropism 2 (SGR2) [Ara	0.740	0.131	0.768	8e-50
12322534	869	unknown protein [Arabidopsis thaliana]	0.740	0.141	0.776	9e-50

>gi|356529907|ref|XP_003533528.1| PREDICTED: phospholipase DDHD1-like [Glycine max]

 Score =  224 bits (572), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 106/151 (70%), Positives = 121/151 (80%), Gaps = 1/151 (0%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQREEELLS+WW+EYAECSEGPRER SS  K+D + S     +S++LYE+EEERVGVPV
Sbjct: 92  FLQREEELLSSWWREYAECSEGPRERQSSSSKADTE-SFMGHTQSSQLYEIEEERVGVPV 150

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQVW
Sbjct: 151 KGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQVW 210

Query: 125 HRRTFNLLDFLQLELTCKALLQYIYFLVKWE 155
           HRRTF         +  +   Q ++ L   E
Sbjct: 211 HRRTFQPSGLFAARVDLQGSTQGLHALFMGE 241

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460119|ref|XP_002275612.1| PREDICTED: uncharacterized protein LOC100260107 [Vitis vinifera] gi|297741004|emb|CBI31316.3| unnamed protein product [Vitis vinifera]

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 102/127 (80%), Positives = 114/127 (89%), Gaps = 2/127 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS+WW+EYAECSEGP+ER  S   SD++  AS +E+ R A+LYEVEEERVGV
Sbjct: 127 FLQREEELLSSWWREYAECSEGPKERPKSGTNSDLKLKASSSENARPAQLYEVEEERVGV 186

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFP+YWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLE AYR Q
Sbjct: 187 PVKGGLYEVDLVKRHCFPIYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEFAYRGQ 246

Query: 123 VWHRRTF 129
           VWHRRTF
Sbjct: 247 VWHRRTF 253

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569112|ref|XP_002525525.1| conserved hypothetical protein [Ricinus communis] gi|223535204|gb|EEF36883.1| conserved hypothetical protein [Ricinus communis]

 Score =  220 bits (561), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 104/127 (81%), Positives = 113/127 (88%), Gaps = 2/127 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLT--ESVRSAELYEVEEERVGV 62
            L+REEELLS+WWKEYAECSEGP+ R SS KK D + S    +  R+A LYEVEEERVGV
Sbjct: 100 FLEREEELLSSWWKEYAECSEGPKVRLSSDKKLDTEKSACSPKGSRAAHLYEVEEERVGV 159

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQ
Sbjct: 160 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQ 219

Query: 123 VWHRRTF 129
           VWHRRTF
Sbjct: 220 VWHRRTF 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864929|emb|CAN79370.1| hypothetical protein VITISV_018588 [Vitis vinifera]

 Score =  219 bits (558), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/153 (67%), Positives = 120/153 (78%), Gaps = 2/153 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS+WW+EYAECSEGP+ER  S   SD++  AS +E+ R A+LYEVEEERVGV
Sbjct: 127 FLQREEELLSSWWREYAECSEGPKERPKSGTNSDLKLKASSSENARPAQLYEVEEERVGV 186

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFP+YWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLE AYR Q
Sbjct: 187 PVKGGLYEVDLVKRHCFPIYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEFAYRGQ 246

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLVKWE 155
           VWHRRTF         +  +     ++ L   E
Sbjct: 247 VWHRRTFQPSGLFAARIDLQGSTPGLHALFTGE 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146261|ref|XP_002325941.1| predicted protein [Populus trichocarpa] gi|222862816|gb|EEF00323.1| predicted protein [Populus trichocarpa]

 Score =  211 bits (538), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 111/127 (87%), Gaps = 2/127 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESV--RSAELYEVEEERVGV 62
            LQREEELLS+WWKEYAECSEGP    ++ KK D Q +    V  R+A+L+EVEEERVGV
Sbjct: 99  FLQREEELLSSWWKEYAECSEGPSGWPTTSKKIDTQENADSPVGGRAAQLHEVEEERVGV 158

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGL WLP+REDVAEQLEIAY+SQ
Sbjct: 159 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLGWLPLREDVAEQLEIAYQSQ 218

Query: 123 VWHRRTF 129
           VWHRRTF
Sbjct: 219 VWHRRTF 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135773|ref|XP_002327300.1| predicted protein [Populus trichocarpa] gi|222835670|gb|EEE74105.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 109/127 (85%), Gaps = 2/127 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDV--QASLTESVRSAELYEVEEERVGV 62
            LQREEELL++WWKEYAECSEGP    ++ KK +    A   E  R+A+L EVEEERVGV
Sbjct: 99  FLQREEELLTSWWKEYAECSEGPVGWPTTSKKFNTLENADSPEGGRAAQLREVEEERVGV 158

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQ
Sbjct: 159 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQ 218

Query: 123 VWHRRTF 129
           VWHRR F
Sbjct: 219 VWHRRMF 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442116|ref|XP_004138828.1| PREDICTED: SEC23-interacting protein-like [Cucumis sativus]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 98/127 (77%), Positives = 109/127 (85%), Gaps = 2/127 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS WWKEYAECSEGP+ERA S  + D Q   S ++  +   LY+VEEERVGV
Sbjct: 113 FLQREEELLSIWWKEYAECSEGPKERAGSSLRPDKQRNESTSDVAKLVNLYDVEEERVGV 172

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWN +NRRV+RGHWFARKGGLDWLP+REDVAEQLEIAYRS+
Sbjct: 173 PVKGGLYEVDLVKRHCFPVYWNAENRRVMRGHWFARKGGLDWLPLREDVAEQLEIAYRSR 232

Query: 123 VWHRRTF 129
           VW RRTF
Sbjct: 233 VWRRRTF 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490252|ref|XP_004158551.1| PREDICTED: SEC23-interacting protein-like [Cucumis sativus]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 108/126 (85%), Gaps = 2/126 (1%)

Query: 6   LQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGVP 63
           + REEELLS WWKEYAECSEGP+ERA S  + D Q   S ++  +   LY+VEEERVGVP
Sbjct: 1   MMREEELLSIWWKEYAECSEGPKERAGSSLRPDKQRNESTSDVAKLVNLYDVEEERVGVP 60

Query: 64  VKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQV 123
           VKGGLYEVDLV+RHCFPVYWN +NRRV+RGHWFARKGGLDWLP+REDVAEQLEIAYRS+V
Sbjct: 61  VKGGLYEVDLVKRHCFPVYWNAENRRVMRGHWFARKGGLDWLPLREDVAEQLEIAYRSRV 120

Query: 124 WHRRTF 129
           W RRTF
Sbjct: 121 WRRRTF 126

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329893|ref|NP_174433.2| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana] gi|16904659|dbj|BAB71959.1| shoot gravitropism 2 [Arabidopsis thaliana] gi|332193239|gb|AEE31360.1| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana]

 Score =  201 bits (511), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 96/125 (76%), Positives = 109/125 (87%), Gaps = 2/125 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQRE+ELLS WWKEYAECSEGP+ + +S KKS    + +E+  S+ LYEVEEERVGVPV
Sbjct: 101 FLQREDELLSLWWKEYAECSEGPKLQVNSKKKS--IETPSEASVSSSLYEVEEERVGVPV 158

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW
Sbjct: 159 KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVW 218

Query: 125 HRRTF 129
            RR+F
Sbjct: 219 RRRSF 223

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322534|gb|AAG51263.1|AC027135_4 unknown protein [Arabidopsis thaliana]

 Score =  201 bits (511), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/125 (77%), Positives = 108/125 (86%), Gaps = 2/125 (1%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQRE+ELLS WWKEYAECSEGP+ + +S KKS    S  E+  S+ LYEVEEERVGVPV
Sbjct: 101 FLQREDELLSLWWKEYAECSEGPKLQVNSKKKSIETPS--EASVSSSLYEVEEERVGVPV 158

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW
Sbjct: 159 KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVW 218

Query: 125 HRRTF 129
            RR+F
Sbjct: 219 RRRSF 223

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2028641	933	SGR2 "SHOOT GRAVITROPISM 2" [A	0.734	0.130	0.782	2.4e-49
ZFIN|ZDB-GENE-040724-18	861	ddhd1b "DDHD domain containing	0.457	0.088	0.380	1e-08
UNIPROTKB|Q8NEL9	900	DDHD1 "Phospholipase DDHD1" [H	0.548	0.101	0.360	3.7e-08
UNIPROTKB|G3N1K0	835	DDHD1 "Phospholipase DDHD1" [B	0.391	0.077	0.410	1.5e-07
UNIPROTKB|F1N1C0	875	DDHD1 "Phospholipase DDHD1" [B	0.391	0.074	0.410	1.6e-07
UNIPROTKB|O46606	875	DDHD1 "Phospholipase DDHD1" [B	0.391	0.074	0.410	1.6e-07
UNIPROTKB|E2RE74	884	DDHD1 "Uncharacterized protein	0.367	0.069	0.434	2.1e-07
UNIPROTKB|E2RE68	910	DDHD1 "Uncharacterized protein	0.367	0.067	0.434	2.1e-07
POMBASE|SPAC20G8.02	757	SPAC20G8.02 "mitochondrial DDH	0.710	0.155	0.322	2.2e-07
RGD|1308576	855	Ddhd1 "DDHD domain containing	0.313	0.060	0.464	2.5e-07

TAIR|locus:2028641 SGR2 "SHOOT GRAVITROPISM 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 2.4e-49, P = 2.4e-49
 Identities = 97/124 (78%), Positives = 109/124 (87%)

Query:     6 LQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVK 65
             LQRE+ELLS WWKEYAECSEGP+ + +S KKS ++     SV S+ LYEVEEERVGVPVK
Sbjct:   102 LQREDELLSLWWKEYAECSEGPKLQVNSKKKS-IETPSEASV-SSSLYEVEEERVGVPVK 159

Query:    66 GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWH 125
             GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW 
Sbjct:   160 GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVWR 219

Query:   126 RRTF 129
             RR+F
Sbjct:   220 RRSF 223

GO:0005737 "cytoplasm" evidence=ISM

GO:0046872 "metal ion binding" evidence=IEA

GO:0009630 "gravitropism" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0008970 "phosphatidylcholine 1-acylhydrolase activity" evidence=ISS

GO:0009660 "amyloplast organization" evidence=IMP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009590 "detection of gravity" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

ZFIN|ZDB-GENE-040724-18 ddhd1b "DDHD domain containing 1b" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%)

Query:    37 SDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNG-DNRRVLRGHW 95
             +D   S  +SV  ++   V+     V V+GGLYEVD+  + C+PVYWN  D+  V+RG W
Sbjct:   212 ADAGCSTDDSVFRSDSVNVD----AVCVRGGLYEVDIKGKSCYPVYWNQQDHIPVMRGQW 267

Query:    96 FARKGGLDWLPIREDVAEQLEIAY 119
             F    G  WLP+ E+ ++ +E+ +
Sbjct:   268 FT--DGT-WLPLEEEDSDLIELEH 288

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8NEL9 DDHD1 "Phospholipase DDHD1" [Homo sapiens (taxid:9606)]

 Score = 138 (53.6 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 35/97 (36%), Positives = 47/97 (48%)

Query:    23 CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERVG-VPVKGGLYEVDLVRRHCFP 80
             CS  GP   +      D      +S    E   VE   +  V V+GGLYEVD+ +  C+P
Sbjct:   216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275

Query:    81 VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
             VYWN  D   V+RG WF    G  W P+ E+ +  +E
Sbjct:   276 VYWNQADKIPVMRGQWFI--DGT-WQPLEEEESNLIE 309

GO:0046872 "metal ion binding" evidence=IEA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|G3N1K0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N1C0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|O46606 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0005737 "cytoplasm" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RE74 DDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query:    53 YEVE-EERVGVP---VKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPI 107
             +E E EE V +    V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+
Sbjct:   254 HEPEMEELVNIERVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI--DGT-WQPL 310

Query:   108 REDVAEQLE 116
              E+ +  +E
Sbjct:   311 EEEESNLIE 319

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RE68 DDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query:    53 YEVE-EERVGVP---VKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPI 107
             +E E EE V +    V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+
Sbjct:   254 HEPEMEELVNIERVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI--DGT-WQPL 310

Query:   108 REDVAEQLE 116
              E+ +  +E
Sbjct:   311 EEEESNLIE 319

GO:0046872 "metal ion binding" evidence=IEA

POMBASE|SPAC20G8.02 SPAC20G8.02 "mitochondrial DDHD family phospholipase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 40/124 (32%), Positives = 57/124 (45%)

Query:    26 GPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGG---LYEVDLVRRHCFPVY 82
             GP E   +       A  +E +  + L  VE +    PV      LY V++V R   P+Y
Sbjct:   112 GPTEIKKAKNFLPFSAEDSEHIEKSYLKAVENDGQSEPVNVNEDYLYSVNVVSRELSPIY 171

Query:    83 WNGDNRRVLRGHWFARKGGLDWL-PIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTC 141
             W+G   R+LRG WF  +G  D L P  E++A Q+E  Y +   +R   N  D    +   
Sbjct:   172 WDGPVYRILRGTWFFSRG--DKLYPCEENLATQVEEGYLNSCPYREFSNEKDSAAAQSKT 229

Query:   142 KALL 145
              ALL
Sbjct:   230 WALL 233

GO:0004620 "phospholipase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0044242 "cellular lipid catabolic process" evidence=IC

GO:0046872 "metal ion binding" evidence=ISM

RGD|1308576 Ddhd1 "DDHD domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 130 (50.8 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)

Query:    62 VPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
             V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E+ +  +E
Sbjct:   240 VCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI--DGT-WQPLEEEESNLIE 292

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
KOG2308	741	consensus Phosphatidic acid-preferring phospholipa	99.87
PF02825	72	WWE: WWE domain; InterPro: IPR004170 The WWE domai	96.81
smart00678	73	WWE Domain in Deltex and TRIP12 homologues. Possib	96.5

>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.87  E-value=5.1e-23  Score=195.74  Aligned_cols=144  Identities=32%  Similarity=0.462  Sum_probs=119.0

Q ss_pred             hHHHhHHHHHHHHHHHHHHHhcCCCCCccCCCcccccccccCCCcccchhhhccC---ceeeEEecCceeEEecCCeeee
Q 031098            3 EHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEE---ERVGVPVKGGLYEVDLVRRHCF   79 (166)
Q Consensus         3 ~~~~~r~~~l~~~~w~e~ae~~~g~~~~~~~~~~~d~~a~~~~~s~~~~l~~~d~---e~~~V~V~ggLfeVdl~~r~l~   79 (166)
                      ++|+.|..+....||++|+.|..+..-.-+.-.+..  +.+.+-+++..|++...   +...|+|+||||+||+..|+|.
T Consensus        90 ~~~~~~~~~~p~~~~r~~s~~~~~~~~~~~~~~~~~--~~p~~~~ds~~le~~~~~~~e~~~v~v~gG~Y~Vd~~~r~~~  167 (741)
T KOG2308|consen   90 ASFLPRDSEAPEYWVRQYSGVNPHEFYRLTSEYKST--WTPSEHSDSDDLEEGENDDQESPPVVVEGGLYEVDKENRKCS  167 (741)
T ss_pred             cccccccccCcccccccccCCCCChhhhcccccccc--ccccccccccccccccccCCccCceeecCCeeeeeeeccccc
Confidence            578999999999999999999888776654333333  22333345777776665   8889999999999999999999


Q ss_pred             eeecCCCCcceEeeEeeeeCCCCceeeCCHHHHHHHHHHHhhcc----cccccccCCcceeEeEccceeeeeEeeee
Q 031098           80 PVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQV----WHRRTFNLLDFLQLELTCKALLQYIYFLV  152 (166)
Q Consensus        80 PVYW~g~~~eVrRGtWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~----W~~~l~~p~ge~~v~~~~~~~~~~vh~L~  152 (166)
                      ||||+|+.++||||+||+++ +++|+||+|.+|++||.+|++++    |+....+..+.++.++|+.   .++||++
T Consensus       168 pvYW~~d~~ev~Rg~WF~~~-~~~~~P~~e~~s~qlE~~yl~~~~~~~~~~~~~~~~~s~~s~~g~~---v~~~f~~  240 (741)
T KOG2308|consen  168 PVYWSGDEKEVRRGTWFFDG-GSTLQPLEEELSEQLEAEYLNSFRTQELPENFTLFTASYISIHGKP---VVVSFKY  240 (741)
T ss_pred             CCCCCCCcccceeeeeeecC-CCceeeccchhHHHHHHHHHHHhhhcccccccccccceeeeecCCc---eEEEeee
Confidence            99999999999999999986 78999999999999999999754    7788888888887667665   5578877

>PF02825 WWE: WWE domain; InterPro: IPR004170 The WWE domain is named after three of its conserved residues and is predicted to mediate specific protein-protein interactions in ubiquitin and ADP ribose conjugation systems

Probab=96.81  E-value=0.0025  Score=43.41  Aligned_cols=54  Identities=19%  Similarity=0.140  Sum_probs=36.2

Q ss_pred             eEeeeeCCCCceeeCCHHHHHHHHHHHhhcccccccccCCcceeEeEccceeeeeE
Q 031098           93 GHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        93 GtWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      ..|++.++++.|.||+++.+..||++|+.+.=.-.+...+..  -.+++..|+|+-
T Consensus         8 ~~W~w~~~~~~W~~Y~~~~~~~IE~a~~~~~~~~~~~~~~~~--Y~IDF~~M~Q~n   61 (72)
T PF02825_consen    8 YVWQWEDDDGGWHPYDPEVSEIIEEAYQNGKKSCQLSIGGRP--YTIDFKSMTQIN   61 (72)
T ss_dssp             EEEEEESETSSEEE--HHHHHHHHHHHHTTTSEEEEEETTEE--EEEETTTTEEEE
T ss_pred             EEEEEECCCCcEEeCCcHHHHHHHHHHHcCCcEEEEEeCCcE--EEEEChhcEEEe
Confidence            468887556799999999999999999975312223334333  457787777654

This domain is found as a tandem repeat at the N-terminal of Deltex, a cytosolic effector of Notch signalling thought to bind the N-terminal of the Notch receptor []. It is also found as an interaction module in protein ubiquination and ADP ribosylation proteins [].; PDB: 2A90_A 1UJR_A 2DK6_A 3V3L_B.

>smart00678 WWE Domain in Deltex and TRIP12 homologues

Probab=96.50  E-value=0.0075  Score=41.62  Aligned_cols=52  Identities=21%  Similarity=0.210  Sum_probs=37.0

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhhc-ccccccccCCcceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDVAEQLEIAYRSQ-VWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~-~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      .|++.++++.|.|+++..+..||++|..+ ... .+...+..  -.++++.|+|+-
T Consensus         2 ~W~w~~~~g~W~~Y~~~~~~~IE~ay~~~~~~~-~v~~~g~~--Y~IdF~~m~Q~n   54 (73)
T smart00678        2 VWEYEGRNGKWWPYDPRVSEDIEEAYAAGKKLC-ELSICGFP--YTIDFNAMTQYN   54 (73)
T ss_pred             EEEEECCCCCeeeCChHHHHHHHHHHHcCCCeE-EEEECCeE--EEEECcCCEEEC
Confidence            58887666689999999999999999974 222 23333333  457777777764

Possibly involved in regulation of ubiquitin-mediated proteolysis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 58/195 (29%)

Query: 2   VEHLLQREEELLSNWWKE-----------YAECSEGPRERASSIKKSDVQ-ASLTESVRS 49
           VE +L+   + L +  K            Y E  +          K +V        +R 
Sbjct: 83  VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 50  AELYEVEEERVGVPVKG----G--------LYEVDLVRRHCFPVYW------NGDN---- 87
           A L E+   +  V + G    G             +  +  F ++W      N       
Sbjct: 143 A-LLELRPAK-NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 88  -----RRVLRGHWFARKGGLDWLPIR-EDVAEQLEIAYRSQ-----------VWHRRTFN 130
                   +  +W +R      + +R   +  +L    +S+           V + + +N
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 131 LLDFLQLELTCKALL 145
             +      +CK LL
Sbjct: 261 AFNL-----SCKILL 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
2a90_A	240	Deltex protein; WWE domain, metal binding protein;	96.47
3v3l_A	85	E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65	95.96
1ujr_A	110	Hypothetical protein AK012080; WWE domain, structu	94.76
2dk6_A	102	PARP11 protein; structural genomics, WWE domain, N	93.28
2a90_A	240	Deltex protein; WWE domain, metal binding protein;	85.87

>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1

Probab=96.47  E-value=0.007  Score=51.02  Aligned_cols=78  Identities=18%  Similarity=0.130  Sum_probs=55.8

Q ss_pred             ceeEEecCCeeeeeeecCCC-----CcceEee------------EeeeeC---C-CCceeeCCHHHHHHHHHHHhhcccc
Q 031098           67 GLYEVDLVRRHCFPVYWNGD-----NRRVLRG------------HWFARK---G-GLDWLPIREDVAEQLEIAYRSQVWH  125 (166)
Q Consensus        67 gLfeVdl~~r~l~PVYW~g~-----~~eVrRG------------tWF~~~---~-~~~~~Pl~E~lA~~LE~~Y~~~~W~  125 (166)
                      +.|.||+.+|+..--= .|.     ...|||-            .|+..+   + .+.|.||+..++..||.+|..+.  
T Consensus        68 ~~y~IDf~sMtQ~~~d-tg~~~~~~~r~VRR~~~~PsS~~g~g~vWeW~d~~~D~~G~W~~Y~~~vs~~IE~Ay~~g~--  144 (240)
T 2a90_A           68 EQYYVNVRTMTQESEA-ETAGSGLLTIGVRRMFYAPSSPAGKGTKWEWSGGSADSNNDWRPYNMHVQSIIEDAWARGE--  144 (240)
T ss_dssp             TTCEEETTTTEEEC----------CCCBEEEEEECTTSHHHHTEEEEEECSSSSCCSSEEECCHHHHHHHHHHHHTTC--
T ss_pred             CceEEeccccEEEeec-cCccccccceeeeeccccCCCcCCCccEEEEeCCCCCCCCceEECCHHHHHHHHHHHhcCC--
Confidence            7799999999875422 455     7899993            788886   3 36899999999999999999864  


Q ss_pred             cccccC---CcceeEeEccceeeeeE
Q 031098          126 RRTFNL---LDFLQLELTCKALLQYI  148 (166)
Q Consensus       126 ~~l~~p---~ge~~v~~~~~~~~~~v  148 (166)
                      ..+.+.   .| ..-.++++.|+|+-
T Consensus       145 ~~v~L~~t~~G-~~Y~IDF~~MtQ~N  169 (240)
T 2a90_A          145 QTLDLSNTHIG-LPYTINFSNLTQLR  169 (240)
T ss_dssp             SEEEHHHHTSS-CCEEEETTTTEEEE
T ss_pred             CcceeeecCCC-ceEEEECCCcEEEe
Confidence            445552   33 33457777777653

>3v3l_A E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65A {Homo sapiens}

Probab=95.96  E-value=0.011  Score=42.02  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=38.2

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhhcccccccccCCcceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      .|++.+++ .|.+|++.++..||++|..+.  +.+++.-..+.-.+++..++|..
T Consensus         6 ~W~w~~~~-GW~~Yd~~~s~~IE~af~~~~--~~~~l~i~G~~Y~IdF~~m~Q~~   57 (85)
T 3v3l_A            6 AWYYEGRN-GWWQYDERTSRELEDAFSKGK--KNTEMLIAGFLYVADLENMVQYR   57 (85)
T ss_dssp             EEEEECSS-SEEECCHHHHHHHHHHHHTTC--SEEEEEETTEEEEEETTTTEEEE
T ss_pred             EEEEeCCC-CceeCCHHHHHHHHHHHHhCC--CcEEEEeCCcEEEEEchhceeec
Confidence            59998754 599999999999999999763  33333333355677888887765

>1ujr_A Hypothetical protein AK012080; WWE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.289.1.1

Probab=94.76  E-value=0.038  Score=41.39  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=37.7

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhhcccccccccCCcceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      .||+.+++ .|.+|++..+..||++|..+.  +.+++.-+-+.-.++++.++|+.
T Consensus        31 ~W~w~gd~-GW~~Yd~~~s~~IE~Ay~~g~--~~~~l~i~G~~Y~IDF~~m~Q~r   82 (110)
T 1ujr_A           31 AWYYEGRN-GWWQYDERTSRELEDAFSKGK--KNTEMLIAGFLYVADLENMVQYR   82 (110)
T ss_dssp             EEEEECSS-SEEECCSHHHHHHHHHHHHTC--SEEEEEETTEEEEEETTTTEEEE
T ss_pred             EEEEeCCC-CCccCCHHHHHHHHHHHHcCC--CceEEEeCCcEEEEEhhHceeec
Confidence            69997654 699999999999999999764  22222222344567888888775

>2dk6_A PARP11 protein; structural genomics, WWE domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.28  E-value=0.066  Score=39.36  Aligned_cols=54  Identities=13%  Similarity=0.220  Sum_probs=37.6

Q ss_pred             EeeeeCCCCceeeCCHHH-------HHHHHHHHhhcccccccccCCcceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDV-------AEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~l-------A~~LE~~Y~~~~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      .||+.++.+.|.||..++       +..||++|+...= ..+.+.-|...-.++++.|+|+-
T Consensus        21 ~W~W~de~G~W~~Y~~~~~~~~sv~S~~IE~ay~~~~~-~~v~f~a~~~~Y~IdF~~M~Q~N   81 (102)
T 2dk6_A           21 GWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPC-GSISFTTSKFSYKIDFAEMKQMN   81 (102)
T ss_dssp             EEEECCSSSCCEECCCBSSTTCBCCHHHHHHHHHHCTT-SEEEEEETTEEEEEETTTTEEEE
T ss_pred             EEEEECCCCceeECCccccccccccHHHHHHHHhhCCC-CeEEEeeCCceEEEECCccEEec
Confidence            599976667899999966       8999999997430 11333334444567888877764

>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1

Probab=85.87  E-value=0.74  Score=38.72  Aligned_cols=30  Identities=27%  Similarity=0.464  Sum_probs=25.1

Q ss_pred             eEeeeeCCCCceeeCCHHHHHHHHHHHhhcc
Q 031098           93 GHWFARKGGLDWLPIREDVAEQLEIAYRSQV  123 (166)
Q Consensus        93 GtWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~  123 (166)
                      ..|.+.++ ++|.||+..+++.||++|.+..
T Consensus        26 ~vWEwqd~-g~W~pYs~~v~~~IE~a~~~~~   55 (240)
T 2a90_A           26 SVWEFESR-GKWLPYSPAVSQHLERAHAKKL   55 (240)
T ss_dssp             EEEEEEET-TEEEECCHHHHHHHHHHHHTTC
T ss_pred             EEEEEecC-CeEeeCCHHHHHHHHHHhcCCC
Confidence            45777655 5999999999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1ujra_	110	RING finger protein 146 (Dactylidin) {Mouse (Mus m	95.95
d2a90a1	89	Deltex (Dx) {Fruit fly (Drosophila melanogaster) [	95.45
d2a90a2	80	Deltex (Dx) {Fruit fly (Drosophila melanogaster) [	94.93

>d1ujra_ d.289.1.1 (A:) RING finger protein 146 (Dactylidin) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: RING finger protein 146 (Dactylidin)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.95  E-value=0.0042  Score=44.11  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=36.2

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhhcccccccccCCcceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~p~ge~~v~~~~~~~~~~v  148 (166)
                      .||+.+++ .|.||++.....||++|+.+.  ..+.+.-+...-.++++.|+|+.
T Consensus        31 ~W~~~~~~-gW~~Y~~~~~~~IE~ay~~~~--~~~~l~i~g~~Y~IDf~~M~Q~n   82 (110)
T d1ujra_          31 AWYYEGRN-GWWQYDERTSRELEDAFSKGK--KNTEMLIAGFLYVADLENMVQYR   82 (110)
T ss_dssp             EEEEECSS-SEEECCSHHHHHHHHHHHHTC--SEEEEEETTEEEEEETTTTEEEE
T ss_pred             EEEEeCCC-CEEECCHHHHHHHHHHHHcCC--CeEEEEECCeeEEEEhhhcEEEe
Confidence            59998654 699999999999999998752  33333323333456777777654

>d2a90a1 d.289.1.1 (A:43-131) Deltex (Dx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: Deltex (Dx)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.45  E-value=0.0088  Score=41.19  Aligned_cols=50  Identities=20%  Similarity=0.242  Sum_probs=35.5

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhhccccccccc----CCc-ceeEeEccceeeeeE
Q 031098           94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFN----LLD-FLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~----p~g-e~~v~~~~~~~~~~v  148 (166)
                      .|++.+ ++.|.||++.++..||++|..+.  ..+.+    ++| .|  .+++..|+|+-
T Consensus         6 VWeW~d-~g~W~~Y~~~~~~~IE~Ay~~~~--~~v~L~~~~~~g~~Y--~IDf~~M~Q~n   60 (89)
T d2a90a1           6 VWEFES-RGKWLPYSPAVSQHLERAHAKKL--TRVMLSDADPSLEQY--YVNVRTMTQES   60 (89)
T ss_dssp             EEEEEE-TTEEEECCHHHHHHHHHHHHTTC--CEEEGGGTSTTSTTC--EEETTTTEEEC
T ss_pred             EEEEcC-CCceecCCHHHHHHHHHHHhcCC--CeEEEEEEccCCceE--EEECceeEEEe
Confidence            688875 46899999999999999998642  22222    333 34  47888888764

>d2a90a2 d.289.1.1 (A:132-211) Deltex (Dx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: Deltex (Dx)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.93  E-value=0.013  Score=38.91  Aligned_cols=53  Identities=19%  Similarity=0.181  Sum_probs=33.2

Q ss_pred             EeeeeC--CCCceeeCCHHHHHHHHHHHhhccccccccc--CCcceeEeEccceeeeeE
Q 031098           94 HWFARK--GGLDWLPIREDVAEQLEIAYRSQVWHRRTFN--LLDFLQLELTCKALLQYI  148 (166)
Q Consensus        94 tWF~~~--~~~~~~Pl~E~lA~~LE~~Y~~~~W~~~l~~--p~ge~~v~~~~~~~~~~v  148 (166)
                      .|+...  +++.|.||++..+..||++|+.+.=.-.|..  ++..|  .++++.|+|+-
T Consensus         3 qW~~~~~~~~g~W~~Y~~~~s~~iE~ay~~~~~~~~l~~~~~~~~Y--~IDf~~m~Q~n   59 (80)
T d2a90a2           3 EWSGGSADSNNDWRPYNMHVQSIIEDAWARGEQTLDLSNTHIGLPY--TINFSNLTQLR   59 (80)
T ss_dssp             EEECSSSSCCSSEEECCHHHHHHHHHHHHTTCSEEEHHHHTSSCCE--EEETTTTEEEE
T ss_pred             EEeeeCCCCCCeEEECCHHHHHHHHHHHHcCCCceEEEEcCCCccE--EEECCCCEEEe
Confidence            366432  3458999999999999999986421111211  22233  46777777663