Citrus Sinensis ID: 031118

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MADVQEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHcccEEEEEEEccccccccccccEEEEEEEEccEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHHHcccEEEEEcccccccccccEEEEEEcccccEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccccccccccEEEccccEEEEEccHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEEEEEEcccEEEEEccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEEcccccccccccccEEEEccccEEEEEEccccccccccc
Coil and Loop (DISEMBL)
madvqevqngaapekapataasftgmkpqllveapkatdAVQFYKTAFGAVEIGRSVETKRKaeqelpliscaqleiagstflvsdvsgdsaaaQTVGTGCVLCLETEDVEAAVAKAVSAGavaegelaegngaccgervgkvkdpygftwlicspvkkcagvea
Flexible Loop (DISEMBL)
madvqevqngaapekapataaSFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAvaegelaegngaccGERVGKVKDPYGFTWlicspvkkcagvea
Low Complexity Region (SEG)
MADVQEVQNGaapekapataaSFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDveaavakavsagavaegelaegngaCCGERVGKVKDPYGFTWLICSPVKKCAGVEA
Disordered region (IsUnstruct)
*****************************LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCA****
Disordered Region (DISOPRED)
**********************FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV********
Disordered Region (DISEMBL)
*******************AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA
Disordered Region (DISPRO)
**************KAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADVQEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q9LV66	166	Uncharacterized protein A	yes	no	0.824	0.819	0.473	1e-25
P64742	170	Uncharacterized protein M	yes	no	0.745	0.723	0.326	4e-09
P64741	170	Uncharacterized protein R	yes	no	0.745	0.723	0.326	4e-09

>sp|Q9LV66|Y5848_ARATH Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 91/152 (59%), Gaps = 16/152 (10%)

Query: 9   NGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELP 68
           NGA P +   T   FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP
Sbjct: 12  NGAGPVE---THLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELP 68

Query: 69  LISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGA---- 122
            +  ++L +AGS+F+V DVS     + A++ G+G    L T+D EAAVAKAV AGA    
Sbjct: 69  HVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVE 128

Query: 123 VAEGELAEGNGACCGERVGKVKDPYGFTWLIC 154
           V E E+  G         GKV DP+G TW+  
Sbjct: 129 VTEAEVELGFK-------GKVTDPFGVTWIFA 153

Arabidopsis thaliana (taxid: 3702)

>sp|P64742|Y911_MYCBO Uncharacterized protein Mb0911c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0911c PE=4 SV=1

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 18/141 (12%)

Query: 26  MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVS 85
           + P L+V+   A  A+ FY  AF AVE+GR      K      LI  A L I G T +++
Sbjct: 27  LSPHLVVD--DAASAIDFYVKAFDAVELGRVPGPDGK------LIHAA-LRINGFTVMLN 77

Query: 86  D-----VSGDSAAAQTVG-TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGER 139
           D       G S    ++G T   + L   DV+A   +A++AGA     L +      G+R
Sbjct: 78  DDVPQMCGGKSMTPTSLGGTPVTIHLTVTDVDAKFQRALNAGATVVTALED---QLWGDR 134

Query: 140 VGKVKDPYGFTWLICSPVKKC 160
            G V DP+G  W +  PV++ 
Sbjct: 135 YGVVADPFGHHWSLGQPVREV 155

Mycobacterium bovis (taxid: 1765)

>sp|P64741|Y887_MYCTU Uncharacterized protein Rv0887c/MT0910 OS=Mycobacterium tuberculosis GN=Rv0887c PE=4 SV=1

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 18/141 (12%)

Query: 26  MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVS 85
           + P L+V+   A  A+ FY  AF AVE+GR      K      LI  A L I G T +++
Sbjct: 27  LSPHLVVD--DAASAIDFYVKAFDAVELGRVPGPDGK------LIHAA-LRINGFTVMLN 77

Query: 86  D-----VSGDSAAAQTVG-TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGER 139
           D       G S    ++G T   + L   DV+A   +A++AGA     L +      G+R
Sbjct: 78  DDVPQMCGGKSMTPTSLGGTPVTIHLTVTDVDAKFQRALNAGATVVTALED---QLWGDR 134

Query: 140 VGKVKDPYGFTWLICSPVKKC 160
            G V DP+G  W +  PV++ 
Sbjct: 135 YGVVADPFGHHWSLGQPVREV 155

Mycobacterium tuberculosis (taxid: 1773)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
351723033	165	uncharacterized protein LOC100306467 [Gl	0.975	0.975	0.672	7e-53
356567730	163	PREDICTED: uncharacterized protein At5g4	0.963	0.975	0.654	2e-50
28565534	166	early tobacco anther 1 [Nicotiana tabacu	0.939	0.933	0.613	5e-46
388490626	165	unknown [Medicago truncatula]	0.933	0.933	0.615	4e-45
357505041	165	Early tobacco anther [Medicago truncatul	0.933	0.933	0.615	5e-45
449437180	159	PREDICTED: uncharacterized protein At5g4	0.903	0.937	0.557	6e-40
224069912	164	predicted protein [Populus trichocarpa]	0.969	0.975	0.658	5e-39
449511236	159	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.903	0.937	0.551	8e-39
388492568	167	unknown [Lotus japonicus]	0.975	0.964	0.621	5e-37
225470242	161	PREDICTED: uncharacterized protein At5g4	0.921	0.944	0.628	6e-37

>gi|351723033|ref|NP_001235473.1| uncharacterized protein LOC100306467 [Glycine max] gi|255628635|gb|ACU14662.1| unknown [Glycine max]

 Score =  211 bits (538), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 109/162 (67%), Positives = 126/162 (77%), Gaps = 1/162 (0%)

Query: 5   QEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAE 64
           Q+ QNG +   A A   SF  +KPQLLVEAPKA DA+ F+K AFGA E+GR++  KRKAE
Sbjct: 4   QDAQNGGSENAAAAATVSFVAVKPQLLVEAPKANDAILFFKAAFGAEEVGRTLNPKRKAE 63

Query: 65  QELPLISCAQLEIAGSTFLVSDVSGD-SAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAV 123
            ELPLI  A+L+IAGST LV+D+  D S+ A+T G G VLCLETEDV+ AVAKAVSAGAV
Sbjct: 64  HELPLILSAELKIAGSTILVADLVDDTSSPAKTGGNGVVLCLETEDVDGAVAKAVSAGAV 123

Query: 124 AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA 165
           AEGE+AEG  ACCG RVGKVKDPYGF WL C+P KKCA VEA
Sbjct: 124 AEGEVAEGEVACCGGRVGKVKDPYGFVWLFCTPGKKCADVEA 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567730|ref|XP_003552070.1| PREDICTED: uncharacterized protein At5g48480-like [Glycine max]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/162 (65%), Positives = 124/162 (76%), Gaps = 3/162 (1%)

Query: 5   QEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAE 64
           Q+ QNG +  +  A A SF  +KPQLL+EAPKA DAV FYK AF A E+GR++  KRKAE
Sbjct: 4   QDAQNGGS--ENAAAAVSFVALKPQLLIEAPKANDAVLFYKAAFAAEEVGRTLNPKRKAE 61

Query: 65  QELPLISCAQLEIAGSTFLVSDVSGDSAA-AQTVGTGCVLCLETEDVEAAVAKAVSAGAV 123
            ELPLI  A+L+IAGST LV+D+  DSA+ A+  G   VLCLETEDVE A+ KAVSAGAV
Sbjct: 62  HELPLILSAELKIAGSTILVADLVDDSASTAKAGGNRVVLCLETEDVEGAIEKAVSAGAV 121

Query: 124 AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA 165
           A+GE+AEG  ACCG RVGKVKDPYGF WL C+P KKCA VEA
Sbjct: 122 ADGEVAEGEDACCGGRVGKVKDPYGFVWLFCAPGKKCADVEA 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28565534|gb|AAO43000.1| early tobacco anther 1 [Nicotiana tabacum]

 Score =  189 bits (479), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/163 (61%), Positives = 121/163 (74%), Gaps = 8/163 (4%)

Query: 4   VQEVQNGAAP----EKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVET 59
           ++E QNG A      K    A +FT +KPQL VEAPKA DA QFYK AFG  E+ R V  
Sbjct: 3   LEEAQNGGADLKEATKTAVAAVTFTAVKPQLFVEAPKAKDAAQFYKAAFGVEEVTR-VNQ 61

Query: 60  KRKAEQELPLISCAQLEIAGSTFLVSDVSGD--SAAAQTVGTGCVLCLETEDVEAAVAKA 117
           KRKAEQE+PL+S  +L++  S+FLVS+++ D  SA  +   TGCV CLETEDVEAAVAKA
Sbjct: 62  KRKAEQEIPLVSSVELKLGSSSFLVSNLTDDDSSAPVKAATTGCVFCLETEDVEAAVAKA 121

Query: 118 VSAGAVAEGELAEGNGACC-GERVGKVKDPYGFTWLICSPVKK 159
           VSAGAV+EGE+AEG+GA   G RVGK+KDPYG+ W+ICSPVKK
Sbjct: 122 VSAGAVSEGEIAEGDGAAYFGGRVGKLKDPYGYIWMICSPVKK 164

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490626|gb|AFK33379.1| unknown [Medicago truncatula]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 115/156 (73%), Gaps = 2/156 (1%)

Query: 8   QNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQEL 67
           QNGAA E A +   SF   KPQL VEAPKA DAV FYK AF A E+ RS+  KRKA+QEL
Sbjct: 7   QNGAASETA-SPVVSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQEL 65

Query: 68  PLISCAQLEIAGSTFLVSDVSGDSAA-AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEG 126
           PL+  A+L+IAG++FLV+D   DSA   ++ G G V CLE+E++EAA+AKAVSAGAVAEG
Sbjct: 66  PLVLSAELKIAGASFLVADTVDDSAKLVKSGGNGVVFCLESENIEAAIAKAVSAGAVAEG 125

Query: 127 ELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAG 162
           E+AE  GAC G RVGKV DPYG+ W  C+P KK  G
Sbjct: 126 EVAECEGACGGGRVGKVTDPYGYVWQFCTPAKKAVG 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505041|ref|XP_003622809.1| Early tobacco anther [Medicago truncatula] gi|355497824|gb|AES79027.1| Early tobacco anther [Medicago truncatula] gi|388501826|gb|AFK38979.1| unknown [Medicago truncatula]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 115/156 (73%), Gaps = 2/156 (1%)

Query: 8   QNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQEL 67
           QNGAA E A +   SF   KPQL VEAPKA DAV FYK AF A E+ RS+  KRKA+QEL
Sbjct: 7   QNGAASETA-SPVVSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQEL 65

Query: 68  PLISCAQLEIAGSTFLVSDVSGDSAA-AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEG 126
           PL+  A+L+IAG++FLV+D   DSA   ++ G G V CLE+E++EAA+AKAVSAGAVAEG
Sbjct: 66  PLVLSAELKIAGASFLVADAVDDSAKLVKSGGNGVVFCLESENIEAAIAKAVSAGAVAEG 125

Query: 127 ELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAG 162
           E+AE  GAC G RVGKV DPYG+ W  C+P KK  G
Sbjct: 126 EVAECEGACGGGRVGKVTDPYGYVWQFCTPAKKAVG 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437180|ref|XP_004136370.1| PREDICTED: uncharacterized protein At5g48480-like [Cucumis sativus]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 87/156 (55%), Positives = 111/156 (71%), Gaps = 7/156 (4%)

Query: 6   EVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQ 65
           +VQNG   EK      SF   KPQLL++APKATDAV FYK AF A E+ R++ +KRKAEQ
Sbjct: 5   DVQNGV--EKT----LSFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQ 58

Query: 66  ELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVG-TGCVLCLETEDVEAAVAKAVSAGAVA 124
           E P I   +L ++  + LVS+V  DSA+A+ V  +  VL LETED+EAAV+KAVSAGAV 
Sbjct: 59  ETPAILSVELRVSDFSLLVSNVFDDSASAEKVAESRVVLFLETEDIEAAVSKAVSAGAVV 118

Query: 125 EGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKC 160
           E ++AEG+G   G RV K+KDP+GFTWLI +P K+ 
Sbjct: 119 ESKIAEGDGPYVGNRVAKLKDPFGFTWLIGTPAKES 154

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069912|ref|XP_002303084.1| predicted protein [Populus trichocarpa] gi|118487570|gb|ABK95611.1| unknown [Populus trichocarpa] gi|222844810|gb|EEE82357.1| predicted protein [Populus trichocarpa]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/164 (65%), Positives = 122/164 (74%), Gaps = 4/164 (2%)

Query: 4   VQEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKA 63
           ++E QNG A EK  A   SF   KPQL VEAPKA DAVQFYKTAFGAVE  R+ + KRKA
Sbjct: 3   LEEGQNGGA-EKV-AVEVSFKSFKPQLFVEAPKANDAVQFYKTAFGAVETCRTTQPKRKA 60

Query: 64  EQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAV 123
           +QELP I  AQL++AGSTFLVSD+S DSA+ +  GT   +CLETEDVEAAV KAV+AGAV
Sbjct: 61  DQELPHIVSAQLQLAGSTFLVSDLSDDSASTKAGGTVFAMCLETEDVEAAVTKAVAAGAV 120

Query: 124 AEGELAEGNGA-CCGERVGKVKDPYGFTWLICSPVKKC-AGVEA 165
           AEG + +G GA CC ERV  VKDPYGF W  CSP  KC A VEA
Sbjct: 121 AEGGVVDGEGACCCAERVTTVKDPYGFVWQFCSPADKCGANVEA 164

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511236|ref|XP_004163901.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At5g48480-like [Cucumis sativus]

 Score =  165 bits (417), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 110/156 (70%), Gaps = 7/156 (4%)

Query: 6   EVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQ 65
           +VQNG   EK      SF   KPQLL++APKATDAV FYK AF A E+ R++ +KRKAEQ
Sbjct: 5   DVQNGV--EKT----LSFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQ 58

Query: 66  ELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVG-TGCVLCLETEDVEAAVAKAVSAGAVA 124
           E P I   +L ++  + LVS+V  DSA+A+ V  +  VL LETED+EAAV+KAVSAGAV 
Sbjct: 59  ETPAILSVELRVSDFSLLVSNVFDDSASAEKVAESRVVLFLETEDIEAAVSKAVSAGAVV 118

Query: 125 EGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKC 160
           E ++AEG+G   G RV K+KDP+G TWLI +P K+ 
Sbjct: 119 ESKIAEGDGPYVGNRVAKLKDPFGXTWLIGTPAKES 154

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492568|gb|AFK34350.1| unknown [Lotus japonicus]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/164 (62%), Positives = 116/164 (70%), Gaps = 3/164 (1%)

Query: 5   QEVQNGAA-PEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKA 63
           Q+ QNG +    A A   SF  +KPQLLVEAPKA DAV FYK AFGA E+ R++  KRKA
Sbjct: 4   QDAQNGGSEKNNAAAAVVSFVAVKPQLLVEAPKANDAVLFYKAAFGAEEVSRALNPKRKA 63

Query: 64  EQELPLISCAQLEIAGSTFLVSDVSGDSAA-AQTVGTGCVLCLETEDVEAAVAKAVSAGA 122
           + ELPLI  A+L+IAGS+ LVSD++ DS A A+T G G VLCLETEDVEAAVAKAV AGA
Sbjct: 64  DHELPLILSAELKIAGSSILVSDLAVDSTAPAKTGGNGIVLCLETEDVEAAVAKAVRAGA 123

Query: 123 V-AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAGVEA 165
           V     +    GACCG  V KVKDPYGF W ICSPVK  A V A
Sbjct: 124 VKEGEVVEGEGGACCGGLVVKVKDPYGFIWQICSPVKASAEVAA 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470242|ref|XP_002263284.1| PREDICTED: uncharacterized protein At5g48480 [Vitis vinifera]

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/156 (62%), Positives = 118/156 (75%), Gaps = 4/156 (2%)

Query: 5   QEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAE 64
           QE QNGA+     A A +FT +KPQL VEAPKATDAVQFYK AFGA E+ R++  KRKA+
Sbjct: 3   QENQNGASKA---AAAVTFTAVKPQLFVEAPKATDAVQFYKAAFGAEEVNRTMHPKRKAD 59

Query: 65  QELPLISCAQLEIAGSTFLVSDVSGDS-AAAQTVGTGCVLCLETEDVEAAVAKAVSAGAV 123
           QELPLI  A+++I   + LVSD++ DS A A+TVGTGC +CLET++VEAAV KAV+AGA 
Sbjct: 60  QELPLILSAEVKIGSYSLLVSDLADDSDALAKTVGTGCTICLETDEVEAAVVKAVAAGAT 119

Query: 124 AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK 159
            E   A+G  ACCG RV K+KDPYG  WLICSP KK
Sbjct: 120 NECATADGESACCGGRVAKLKDPYGCVWLICSPAKK 155

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2165996	166	AT5G48480 "AT5G48480" [Arabido	0.769	0.765	0.401	2.2e-18

TAIR|locus:2165996 AT5G48480 "AT5G48480" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 53/132 (40%), Positives = 71/132 (53%)

Query:    23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTF 82
             FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F
Sbjct:    23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSF 82

Query:    83 LVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXXCCGERV 140
             +V DVS     + A++ G+G    L T+D                           G + 
Sbjct:    83 VVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL--GFK- 139

Query:   141 GKVKDPYGFTWL 152
             GKV DP+G TW+
Sbjct:   140 GKVTDPFGVTWI 151


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       129   0.00091  102 3  11 22  0.41    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  552 (59 KB)
  Total size of DFA:  121 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.58u 0.11s 10.69t   Elapsed:  00:00:01
  Total cpu time:  10.58u 0.11s 10.69t   Elapsed:  00:00:01
  Start:  Fri May 10 11:38:40 2013   End:  Fri May 10 11:38:41 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LV66	Y5848_ARATH	No assigned EC number	0.4736	0.8242	0.8192	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00010619001 SubName- Full=Chromosome undetermined scaffold_272, whole genome shotgun sequence; (161 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
cd07246	123	cd07246, Glo_EDI_BRP_like_8, This conserved domain	2e-29
COG2764	136	COG2764, PhnB, Uncharacterized protein conserved i	1e-16
cd06588	128	cd06588, PhnB_like, Escherichia coli PhnB and simi	6e-13
cd07264	125	cd07264, Glo_EDI_BRP_like_15, This conserved domai	4e-10
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	2e-07
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-07
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	5e-07
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	4e-04

>gnl|CDD|211349 cd07246, Glo_EDI_BRP_like_8, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  103 bits (260), Expect = 2e-29
 Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 14/135 (10%)

Query: 24  TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFL 83
             + P L+V    A  A+ FYK AFGA E+ R          +   I  A+L I  S  +
Sbjct: 1   HTVTPYLIVR--DAAAAIDFYKKAFGAEELARM-------PDDDGRIMHAELRIGDSVLM 51

Query: 84  VSDVSGDSAAAQT--VGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVG 141
           ++D   +  A+     GT   L L  EDV+A  A+AV+AGA +    A+      G+R G
Sbjct: 52  LADEFPEHGASPASWGGTPVSLHLYVEDVDATYARAVAAGATSVMPPAD---QFWGDRYG 108

Query: 142 KVKDPYGFTWLICSP 156
            V+DP+G  W I + 
Sbjct: 109 GVRDPFGHRWWIATH 123

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins. Length = 123

>gnl|CDD|225356 COG2764, PhnB, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 71.2 bits (175), Expect = 1e-16
 Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 6/125 (4%)

Query: 37  ATDAVQFYKTAFGAVEIGR-SVETKRKAEQELP--LISCAQLEIAGSTFLVSDVSGDSAA 93
           A +A+ FYK  FGA E+ R        +  E P   I  A+L I GST ++SD   D  A
Sbjct: 12  AREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGA 71

Query: 94  AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI 153
            +  GT   L L  EDV+A   +A +AGA     L +      G+R G+V DP+G  W++
Sbjct: 72  TEGGGTSLSLDLYVEDVDAVFERAAAAGATVVMPLED---TFWGDRYGQVTDPFGVVWML 128

Query: 154 CSPVK 158
            +PV+
Sbjct: 129 NTPVE 133

Length = 136

>gnl|CDD|176658 cd06588, PhnB_like, Escherichia coli PhnB and similar proteins; the E

 Score = 61.5 bits (150), Expect = 6e-13
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 12/124 (9%)

Query: 36  KATDAVQFYKTAFGAVEIGRSVETKRKAEQELP----LISCAQLEIAGSTFLVSDVSGDS 91
            A +A++FY++ FG  EI            +       +  A+L I G   + SD     
Sbjct: 10  NAEEALEFYQSVFGG-EITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGF 68

Query: 92  AAAQTVGTGCVLCLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGF 149
               T G G  L +E +  E A  + +A+S G      L +          G V D +G 
Sbjct: 69  PF--TFGNGISLSVECDSEEEADRLFEALSEGGTVLMPLQK---TFWSPLFGWVTDRFGV 123

Query: 150 TWLI 153
           +W I
Sbjct: 124 SWQI 127

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176685 cd07264, Glo_EDI_BRP_like_15, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQEL--PLISCAQLEIAGSTFLVSDVSGDSAAAQTV 97
            ++FY+ AFG  E     E+    E E     ++ A  ++A S      V  D A     
Sbjct: 14  TLEFYERAFG-FERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPA- 71

Query: 98  GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP 156
             G  +   T+DV AA A+AV AGAV   E  E      G+ V  V+D  GF   +CSP
Sbjct: 72  --GFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPW---GQTVAYVRDINGFLIELCSP 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           A  FY+   G        E + +  +        +L +  +     ++ G        G 
Sbjct: 9   ARAFYEELLGF-------EVEEEDGEYAEF----RLGLVLALGGFIELIGLPEPDAPGGG 57

Query: 100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC 154
           G  L  E +D++A VA+  +AG        +      G R   V+DP G    + 
Sbjct: 58  GVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW---GGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 46.3 bits (110), Expect = 3e-07
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           AV FY+   G   + R       A           L + G+   +    GD  A  + G 
Sbjct: 12  AVAFYEDVLGFEVLERDGGGAEFAF----------LRLGGTRLEL--FEGDEPAPPSGGG 59

Query: 100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI 153
           G  L  E +DV+AAV +  +AG    G   E      G RV   +DP G    +
Sbjct: 60  GVHLAFEVDDVDAAVERLKAAGVEILGGPREEPW---GGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           ++ FY    G   +    + +              LE+     L       +A       
Sbjct: 15  SLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLEL----LLNETPPPAAAGFGGHHI 70

Query: 100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTW 151
              +    +DV+AA  +  +AG     E         G R    +DP G   
Sbjct: 71  A-FIAFSVDDVDAAYDRLKAAGVEIVREPGRH---GWGGRYSYFRDPDGNLI 118

Length = 120

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 34  APKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLV-SDVSGDSA 92
              A     ++ T  G   +       + +     L+   Q +I    F++ S ++  + 
Sbjct: 8   VGNAKQLASWFSTKLGFEPVAYHGSEDKASY----LLR--QGDI---NFVLNSPLNSFAP 58

Query: 93  AAQTV---GTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGA 134
            A  +   G G C +    +D  AA  +AV+ GA    E  E  G 
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGE 104

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.92
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.89
PRK10148	147	hypothetical protein; Provisional	99.88
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.88
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.87
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.83
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.82
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.8
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.79
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.79
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.79
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.76
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	99.75
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.74
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.74
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.73
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.73
PRK10291	129	glyoxalase I; Provisional	99.71
PLN02367	233	lactoylglutathione lyase	99.71
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.7
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.69
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.68
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.67
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.67
PRK11478	129	putative lyase; Provisional	99.66
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.66
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.66
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.65
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.65
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.65
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.64
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.64
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.64
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.63
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.63
PLN03042	185	Lactoylglutathione lyase; Provisional	99.62
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.62
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.62
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.61
PRK06724	128	hypothetical protein; Provisional	99.61
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.61
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.58
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.58
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.57
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.56
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.54
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.54
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.54
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.53
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.53
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.53
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.53
PLN02300	286	lactoylglutathione lyase	99.53
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.52
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.52
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.51
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.51
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.51
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.51
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.51
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.5
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.5
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.49
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.48
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.47
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.46
PLN02300	286	lactoylglutathione lyase	99.46
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.46
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.45
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.45
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.44
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.43
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.42
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.41
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	99.41
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.36
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.32
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.23
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.23
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.19
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.19
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.18
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.12
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.09
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.01
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.82
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.82
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.8
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.7
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.69
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.59
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.39
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.34
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.0
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.0
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.81
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.81
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.47
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.99
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	96.48
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	96.35
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.31
PF15067	236	FAM124: FAM124 family	93.72
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	93.43
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	90.45

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.92  E-value=2.3e-23  Score=149.55  Aligned_cols=131  Identities=36%  Similarity=0.529  Sum_probs=109.2

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc---cccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR---KAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~---~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      +++|+|.+.+ |+++|++||+++||++...+...+++   ..+...++++|+.|.+++..||++|..+...+....+..+
T Consensus         1 ~l~PYl~f~g-n~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           1 TLSPYLFFNG-NAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             CcceEEEECC-CHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcccCCCeeE
Confidence            3689999987 99999999999999999888744321   0111235899999999999999999987643233445667


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          102 VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      +|.+.++|++..++++.+.|+++++++++++|   |.|++.|+||||+.|+|.+....
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fw---G~r~G~v~D~fGv~W~l~~~~~~  134 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFW---GDRYGQVTDPFGVVWMLNTPVES  134 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCc---ccceEEEECCCCCEEEEecCccC
Confidence            88999999999999999999999999999999   99999999999999999887643

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=3.1e-21  Score=135.31  Aligned_cols=118  Identities=24%  Similarity=0.268  Sum_probs=95.6

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc---cccCCccEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA---AQTVGTGCV  102 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~---~~~~~~~~~  102 (165)
                      ++|.|.|+  |+++|++||+++||+++......+    ++   .+.++.+.+++..+++.........   ....+++.+
T Consensus         1 ~~p~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~----~~---~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   71 (122)
T cd08355           1 VWPTLRYR--DAAAAIDWLTDAFGFEERLVVPDD----DG---GVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQG   71 (122)
T ss_pred             CeEEEEEC--CHHHHHHHHHHhcCCEEEEEEeCC----CC---cEEEEEEEECCEEEEEecCCCcccccccccCCCceEE
Confidence            46889998  999999999999999997664211    12   3567888888877877655432111   123456789


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ++|.|+|+++++++++++|+++..+|...+|   |.+.++|+|||||+|+|.+
T Consensus        72 ~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~---g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          72 VYVVVDDVDAHYERARAAGAEILREPTDTPY---GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             EEEEECCHHHHHHHHHHCCCEEeeCccccCC---CcEEEEEECCCCCEEEEec
Confidence            9999999999999999999999999999999   9999999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK10148 hypothetical protein; Provisional

Probab=99.88  E-value=3.4e-21  Score=140.90  Aligned_cols=126  Identities=26%  Similarity=0.358  Sum_probs=101.5

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEee---cCcc-------cccC---CCCceEEEEEEECCeEEEEecCCCCC
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSV---ETKR-------KAEQ---ELPLISCAQLEIAGSTFLVSDVSGDS   91 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~---~~~~-------~~~g---~~~~v~~~~l~~g~~~l~l~d~~~~~   91 (165)
                      ++.|+|.+.+ |+++|++||+++||.++.....   .|..       ..++   ..++|+|+.|++++..||++|..+..
T Consensus         2 ~l~pyL~f~g-~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~   80 (147)
T PRK10148          2 PLSPYLSFAG-NCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG   80 (147)
T ss_pred             eeEEEEEeCC-CHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc
Confidence            4889999964 9999999999999999876542   2210       0011   13579999999999999999876432


Q ss_pred             cccccCCccEEEEEEeCCHHH--HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           92 AAAQTVGTGCVLCLETEDVEA--AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        92 ~~~~~~~~~~~i~~~V~dv~~--~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                         ....++++|+|.++|.++  .+.+++++|+++++++.+.+|   |.++++|+||||+.|+|....
T Consensus        81 ---~~~~~~~~l~l~~~d~ee~~~~~~aLa~gg~v~mpl~~~~w---g~~~g~v~D~fGi~W~l~~~~  142 (147)
T PRK10148         81 ---KAHYSGFTLVLDTQDVEEGKRWFDNLAANGKIEMAWQETFW---AHGFGKVTDKFGVPWMINVVK  142 (147)
T ss_pred             ---CCCCCeEEEEEECCCHHHHHHHHHHhhCCCEEEecchhcch---hhccEEEECCCCCEEEEEecC
Confidence               223358899999999988  467788999999999999999   999999999999999998864

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=7.7e-21  Score=132.45  Aligned_cols=119  Identities=37%  Similarity=0.561  Sum_probs=98.2

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc-ccccCCccEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA-AAQTVGTGCVL  103 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~-~~~~~~~~~~i  103 (165)
                      ++.|+|.|+  |++++++||+++||+++......+    +   ..+.++.+..++..+++.+..+... +....++.+++
T Consensus         2 ~~~~~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~----~---~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd07246           2 TVTPYLIVR--DAAAAIDFYKKAFGAEELERMPDD----D---GRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSL   72 (122)
T ss_pred             ceeEEEEEC--CHHHHHHHHHHhhCCEEEEEEeCC----C---CCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEE
Confidence            578999999  999999999999999998765322    1   2467888888888888876544311 11234567899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          104 CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +|.|+|++++++++++.|++++.+|...+|   |.+.++|+||+||+|+|++
T Consensus        73 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          73 HLYVEDVDATFARAVAAGATSVMPPADQFW---GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             EEEeCCHHHHHHHHHHCCCeEecCcccccc---cceEEEEECCCCCEEEEec
Confidence            999999999999999999999999998889   9999999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.87  E-value=1.4e-20  Score=134.07  Aligned_cols=122  Identities=24%  Similarity=0.352  Sum_probs=96.2

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCccc---ccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRK---AEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~---~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +.|+|.+.. |+++|++||+++||+++......++..   .+...++++|+.+++++..|++.+..+...  ...+++++
T Consensus         1 l~p~L~~~~-~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~--~~~~~~~~   77 (128)
T cd06588           1 ITPYLWFNG-NAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFP--FTFGNGIS   77 (128)
T ss_pred             CeeEEeeCC-CHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCC--CCCCCCEE
Confidence            468999932 999999999999999998776322110   012235799999999999999988765422  23567889


Q ss_pred             EEEEeCCH---HHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          103 LCLETEDV---EAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       103 i~~~V~dv---~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      ++|.|+|+   ++++++ +++|++++++|...+|   |.++++|+||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~-l~~~g~~~~~~~~~~~---g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEA-LSEGGTVLMPLQKTFW---SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHH-HhcCCeEeccchhcCc---ccccEEEECCCCCEEEeC
Confidence            99999974   455676 5677799999999999   999999999999999984

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=6e-19  Score=123.60  Aligned_cols=114  Identities=30%  Similarity=0.384  Sum_probs=85.4

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC------CC-Ccc--cccC
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS------GD-SAA--AQTV   97 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~------~~-~~~--~~~~   97 (165)
                      .+.|.|+  |++++++||+++||++.....  +    .+     .|..+..++..+.+....      +. ..+  ....
T Consensus         3 ~~~l~v~--D~~~s~~FY~~~lG~~~~~~~--~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (125)
T cd07264           3 YTIIYVE--DVEKTLEFYERAFGFERRFLH--E----SG-----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQP   69 (125)
T ss_pred             eEEEEEc--CHHHHHHHHHHhhCCeEEeec--C----CC-----cEEEecCCcEEEEEEcccccccccccCccCCccccC
Confidence            4566677  999999999999999986432  1    11     255555555555443221      00 000  1234


Q ss_pred             CccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           98 GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        98 ~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +.+++++|.|+|+++++++++++|++++.+|...+|   |.++++++|||||.|+|+++
T Consensus        70 ~~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          70 PAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPW---GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCC---CcEEEEEECCCCCEEEEecC
Confidence            556899999999999999999999999999999999   99999999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=9.5e-19  Score=121.87  Aligned_cols=114  Identities=23%  Similarity=0.282  Sum_probs=88.4

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCC---cccccCC
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDS---AAAQTVG   98 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~---~~~~~~~   98 (165)
                      +++.+.|.++  |+++|++||+++|||++....  +           .+..+..++  ..|.+.......   .+....+
T Consensus         1 ~~~~~~l~v~--D~~~s~~FY~~~lG~~~~~~~--~-----------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   65 (119)
T cd08359           1 TSLYPVIVTD--DLAETADFYVRHFGFTVVFDS--D-----------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQG   65 (119)
T ss_pred             CcceeEEEEC--CHHHHHHHHHHhhCcEEEecc--C-----------cEEEEecCCCceEEEEccCCCCCCcchhcccCC
Confidence            4688999999  999999999999999987541  1           155555544  344443322111   0123456


Q ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           99 TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        99 ~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .+++++|.|+|++++++++.++|++++.+|...+|   |.+.++|+||+||+|+|++
T Consensus        66 ~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          66 QGLILNFEVDDVDAEYERLKAEGLPIVLPLRDEPW---GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             ceEEEEEEECCHHHHHHHHHhcCCCeeeccccCCC---cceEEEEECCCCCEEEEEC
Confidence            67899999999999999999999999999999999   9999999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.3e-18  Score=120.55  Aligned_cols=115  Identities=18%  Similarity=0.150  Sum_probs=83.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC-CC--cccccCCc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG-DS--AAAQTVGT   99 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~-~~--~~~~~~~~   99 (165)
                      |+...+.|.|+  |+++|++||+++||+++....  +     .      +..+. ++..|.+..... ..  ......++
T Consensus         1 ~~~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~~--~-----~------~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~   64 (120)
T cd09011           1 MKFKNPLLVVK--DIEKSKKFYEKVLGLKVVMDF--G-----E------NVTFE-GGFALQEGYSWLEGISKADIIEKSN   64 (120)
T ss_pred             CEEEEEEEEEC--CHHHHHHHHHHhcCCEEeecc--C-----c------eEEEe-ccceeccchhhhccCCcccccccCC
Confidence            55667888888  999999999999999986432  1     1      11111 222222211110 00  00123456


Q ss_pred             cEEEEEEeCCHHHHHHHHHHCCC-eEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          100 GCVLCLETEDVEAAVAKAVSAGA-VAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       100 ~~~i~~~V~dv~~~~~~~~~~G~-~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ..+++|.|+|+++++++++++|+ +++.+|...+|   |.+.++|+|||||+|+|.++
T Consensus        65 ~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~---g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          65 NFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPW---GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             ceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCC---ccEEEEEECCCCCEEEEecc
Confidence            68999999999999999999987 68889999999   99999999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.79  E-value=3.8e-18  Score=119.54  Aligned_cols=110  Identities=19%  Similarity=0.113  Sum_probs=86.1

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.+.|.|+  |+++|++||++ |||+.....  +     .     .+..+..++..|++......    .......+++
T Consensus         3 ~~~~~l~v~--Dl~~s~~FY~~-lG~~~~~~~--~-----~-----~~~~~~~~~~~l~l~~~~~~----~~~~~~~~~~   63 (120)
T cd08350           3 TTIPNLPSR--DLDATEAFYAR-LGFSVGYRQ--A-----A-----GYMILRRGDLELHFFAHPDL----DPATSPFGCC   63 (120)
T ss_pred             cccceeEcC--CHHHHHHHHHH-cCCEEEecC--C-----C-----CEEEEEcCCEEEEEEecCcC----CCCCCcceEE
Confidence            577889998  99999999999 999987542  1     1     26666667777777543211    1123457899


Q ss_pred             EEeCCHHHHHHHHHHCCCeE-------EecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          105 LETEDVEAAVAKAVSAGAVA-------EGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i-------~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |.|+|+++++++++++|+++       +.+|...+|   |.+.++|+||+||+|+|.++
T Consensus        64 ~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~---g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          64 LRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPW---GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             EEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCC---ceeEEEEECCCCCEEEeecC
Confidence            99999999999999999974       456777788   99999999999999999875

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=4e-18  Score=118.81  Aligned_cols=108  Identities=19%  Similarity=0.238  Sum_probs=84.5

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      +++.++|.++  |+++|++||++ |||++....  +           .++.+..++..+++......     ....+.++
T Consensus         1 ~~~~~~l~v~--Dl~~s~~FY~~-LGf~~~~~~--~-----------~~~~l~~~~~~l~l~~~~~~-----~~~~~~~~   59 (113)
T cd08356           1 KSIRPFIPAK--DFAESKQFYQA-LGFELEWEN--D-----------NLAYFRLGNCAFYLQDYYVK-----DWAENSML   59 (113)
T ss_pred             Ccceeccccc--cHHHHHHHHHH-hCCeeEecC--C-----------CEEEEEcCCEEEEeecCCCc-----ccccCCEE
Confidence            4678999999  99999999987 999987542  1           15667778877777553211     12345689


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEE-----ecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          104 CLETEDVEAAVAKAVSAGAVAE-----GELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~-----~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +|.|+|+++++++++++|+.+.     .++...+|   |.+.++|+||+||+|+|.+
T Consensus        60 ~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~---g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          60 HLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPW---WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             EEEECCHHHHHHHHHHcCCcccccceecCccccCC---CcEEEEEECCCccEEEeeC
Confidence            9999999999999999998642     45566678   9999999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.79  E-value=1.1e-17  Score=120.16  Aligned_cols=118  Identities=16%  Similarity=0.179  Sum_probs=87.6

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc-----cccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA-----AQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~-----~~~~~~~~~  102 (165)
                      +.|.|+  |++++++||+++|||++..+...+     +    ..+..+..++..|++........+     ........|
T Consensus         4 i~i~V~--D~e~s~~FY~~vLGf~~~~~~~~~-----~----~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~h   72 (136)
T cd08342           4 VEFYVG--NAKQLASWFSTKLGFEPVAYHGSE-----D----KASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCD   72 (136)
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCeEEEecCCC-----c----eEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEE
Confidence            345555  999999999999999987653211     1    123444456666776543221110     112233459


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      ++|.|+|+++++++++++|++++.+|...+|   |.++++++||+|+.|+|++....
T Consensus        73 ia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~---~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          73 VAFRVDDAAAAYERAVARGAKPVQEPVEEPG---ELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeEccCceecCC---eEEEEEEeccCCcEEEEEecCCC
Confidence            9999999999999999999999999998888   99999999999999999997654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.76  E-value=3.9e-17  Score=112.02  Aligned_cols=110  Identities=25%  Similarity=0.300  Sum_probs=86.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEe
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      |.|.|+  |++++++||+++||+++..... +     .     .+..+..++..+++.......  .....+..+++|.|
T Consensus         2 ~~i~v~--d~~~s~~FY~~~lg~~~~~~~~-~-----~-----~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~   66 (112)
T cd08349           2 PVLPVS--DIERSLAFYRDVLGFEVDWEHP-E-----P-----GYAFLSRGGAQLMLSEHDGDE--PVPLGRGGSVYIEV   66 (112)
T ss_pred             CEEEEC--CHHHHHHHHHhccCeEEEEEcC-C-----C-----cEEEEEeCCEEEEEeccCCCC--CCCCCCcEEEEEEe
Confidence            677888  9999999999999999875531 1     1     256666677777775543211  11345677999999


Q ss_pred             CCHHHHHHHHHHCCCe-EEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          108 EDVEAAVAKAVSAGAV-AEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       108 ~dv~~~~~~~~~~G~~-i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +|++++++++.+.|++ +..++...+|   |.+.++++||+||.|+|++
T Consensus        67 ~~~~~~~~~l~~~G~~~~~~~~~~~~~---g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          67 EDVDALYAELKAKGADLIVYPPEDQPW---GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             CCHHHHHHHHHHcCCcceecCccCCCc---ccEEEEEECCCCCEEEecC
Confidence            9999999999999999 7778888888   8899999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.76  E-value=8.2e-17  Score=111.22  Aligned_cols=111  Identities=19%  Similarity=0.185  Sum_probs=82.9

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-eEEEEecCCCCCcccccCCccEEEEEEe
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-STFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      ++.+.+.|++++++||+++||+++..... +    .+     .+..+..++ ..+.+....+.   ....++..+++|.|
T Consensus         3 hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~----~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~f~v   69 (114)
T cd07247           3 WFELPTTDPERAKAFYGAVFGWTFEDMGD-G----GG-----DYAVFSTGGGAVGGLMKAPEP---AAGSPPGWLVYFAV   69 (114)
T ss_pred             EEEeeCCCHHHHHHHHHhccCceeeeccC-C----CC-----ceEEEEeCCccEEEEecCCCC---CCCCCCeEEEEEEe
Confidence            44444559999999999999998864421 1    11     255666664 33333333221   12345778999999


Q ss_pred             CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          108 EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       108 ~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +|+++++++++++|+++..+|...++   +.+.++|+||+||.|+|++
T Consensus        70 ~di~~~~~~l~~~g~~~~~~~~~~~~---~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          70 DDVDAAAARVEAAGGKVLVPPTDIPG---VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             CCHHHHHHHHHHCCCEEEeCCcccCC---cEEEEEEECCCCCEEEeEC
Confidence            99999999999999999999988887   7799999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=99.75  E-value=2e-16  Score=111.33  Aligned_cols=112  Identities=29%  Similarity=0.467  Sum_probs=83.5

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEE-EEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVE-IGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~-~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      ++.|+|.+.+ ++++|++||+++||... ....+.|+... ...++++|+.|.+++..||+.|..+.    ...+++++|
T Consensus         2 ki~pyL~F~g-~a~eA~~fY~~vf~~~~i~~~~~~~~~~~-~~~~~v~ha~l~i~g~~lm~~D~~~~----~~~~~~~sl   75 (116)
T PF06983_consen    2 KITPYLWFNG-NAEEALEFYKEVFGGSEIMTFGDYPDDEP-EWKDKVMHAELTIGGQKLMASDGGPD----FPFGNNISL   75 (116)
T ss_dssp             SEEEEEEESS--HHHHHHHHHHHSTTEEEEEEEE-TTTCT-THTTSEEEEEEEETTEEEEEEEESTS--------TTEEE
T ss_pred             ceEEEEEeCC-CHHHHHHHHHHHcCCCEEEEEeECCCCCC-CCCCcEEEEEEEECCeEEEEECCCCC----CCCCCcEEE
Confidence            5899999985 99999999999999644 33334453211 13468999999999999999887643    456788999


Q ss_pred             EEEeCCHHHH--HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          104 CLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       104 ~~~V~dv~~~--~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      +|.++|.+++  +...|+.||+        ++   + ++++|+|.||..|+|+
T Consensus        76 ~i~~~~~ee~~~~f~~Ls~gG~--------~~---~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   76 CIECDDEEEIDRIFDKLSEGGQ--------WF---S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEESSHHHHHHHHHHHHTTTE--------TC---C-EEEEEE-TTS-EEEEE
T ss_pred             EEEcCCHHHHHHHHHHHHcCCC--------cc---c-eeEEEEeCCCCEEEeC
Confidence            9999998887  5666788887        44   5 9999999999999985

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.74  E-value=9.9e-17  Score=109.56  Aligned_cols=104  Identities=23%  Similarity=0.287  Sum_probs=77.2

Q ss_pred             EEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEEEE
Q 031118           30 LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      |.|+  |++++++||+++||+++....  +     +      +..+..+.    ....+......   ........+++|
T Consensus         1 l~v~--d~~~a~~FY~~~lg~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   62 (108)
T PF12681_consen    1 LPVS--DLEAAAAFYEDVLGFEVVFDD--P-----D------YVDFSLGFRFHDGVIEFLQFPDP---PGPPGGGFHLCF   62 (108)
T ss_dssp             EEES--SHHHHHHHHHHTTTSEEEEEE--T-----S------EEEEEETEEEEEEEEEEEEEESS---SSSSSSEEEEEE
T ss_pred             CccC--CHHHHHHHHHHhcCCEEEEeC--C-----C------eEEEEeccchhhhhHHHccCCcc---ccCCCceeEEEE
Confidence            4566  999999999999999998742  2     1      23333321    11122111111   234567789999


Q ss_pred             EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          106 ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       106 ~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      .|+|+++++++++++|++++.+|...+|   |.+.++++||+||.|+|+
T Consensus        63 ~v~dv~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   63 EVEDVDALYERLKELGAEIVTEPRDDPW---GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             EESHHHHHHHHHHHTTSEEEEEEEEETT---SEEEEEEE-TTS-EEEEE
T ss_pred             EEcCHHHHHHHHHHCCCeEeeCCEEcCC---CeEEEEEECCCCCEEEeC
Confidence            9999999999999999999999999999   999999999999999986

...

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.2e-16  Score=110.60  Aligned_cols=109  Identities=22%  Similarity=0.245  Sum_probs=81.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ..|.|+  |+++|++||+++||+++....  +           .++.+.. ++..+.+........+....++..|++|.
T Consensus         2 ~~l~v~--d~~~a~~FY~~~lg~~~~~~~--~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   66 (114)
T cd07261           2 VLLYVE--DPAASAEFYSELLGREPVELS--P-----------TFALFVLGSGVKLGLWSRHTVEPASDATGGGSELAFM   66 (114)
T ss_pred             EEEEEC--CHHHHHHHHHHHcCCCccCCC--C-----------ceEEEEeCCCcEEEEeeccccCCCCCCCCCceEEEEE
Confidence            356666  999999999999999876431  1           1555555 44566655433211112234567899999


Q ss_pred             eCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          107 TED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       107 V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |+|   ++++++++.++|+++..+|...+|   | +.++|+||+||+|+|++
T Consensus        67 v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~---g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          67 VDDGAAVDALYAEWQAKGVKIIQEPTEMDF---G-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             cCCHHHHHHHHHHHHHCCCeEecCccccCC---c-cEEEEECCCCCEEEeeC
Confidence            986   778899999999999999999988   8 68899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.2e-16  Score=108.98  Aligned_cols=107  Identities=26%  Similarity=0.276  Sum_probs=80.7

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC---CeEEEEecCCCCCcccccCCccEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA---GSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g---~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +.+.|.++  |++++++||+++||++.....        +   .  ...+..+   +..+.+.....      ......|
T Consensus         2 ~~~~l~v~--Dl~~s~~FY~~~lG~~~~~~~--------~---~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~   60 (112)
T cd07238           2 IVPNLPVA--DPEAAAAFYADVLGLDVVMDH--------G---W--IATFASPQNMTVQVSLATEGG------TATVVPD   60 (112)
T ss_pred             ccceEecC--CHHHHHHHHHHhcCceEEEcC--------C---c--eEEEeecCCCCcEEEEecCCC------CCCCCCE
Confidence            56778888  999999999999999975421        1   0  1222221   23444432211      1123458


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|++++++++++.|+++..+|...+|   |.+.++++||+||+|+|+++
T Consensus        61 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          61 LSIEVDDVDAALARAVAAGFAIVYGPTDEPW---GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             EEEEeCCHHHHHHHHHhcCCeEecCCccCCC---ceEEEEEECCCCCEEEEEEc
Confidence            9999999999999999999999998888889   98999999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.73  E-value=2e-16  Score=110.64  Aligned_cols=111  Identities=22%  Similarity=0.235  Sum_probs=79.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCCCC--cc--cccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSGDS--AA--AQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~~~--~~--~~~~~~~~~  102 (165)
                      +.|.|+  |+++|++||++ |||++.....       .    ..++.+..+ +..|++.......  .+  +...++..+
T Consensus         4 i~l~V~--D~~~a~~FY~~-LGf~~~~~~~-------~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~   69 (122)
T cd07235           4 VGIVVA--DMAKSLDFYRR-LGFDFPEEAD-------D----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIA   69 (122)
T ss_pred             EEEEec--cHHHHHHHHHH-hCceecCCcC-------C----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEE
Confidence            345555  99999999975 9998753311       0    125555555 5667664432100  00  123345678


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          103 LCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       103 i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ++|.+.   |+++++++++++|+++..+|.+.+|   |.+.++|+|||||.|+|+.
T Consensus        70 l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          70 LAFLCETPAEVDALYAELVGAGYPGHKEPWDAPW---GQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCC---CCEEEEEECCCCCEEEEeC
Confidence            888775   7999999999999999999999999   9999999999999999973

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PRK10291 glyoxalase I; Provisional

Probab=99.71  E-value=8.8e-16  Score=108.88  Aligned_cols=119  Identities=19%  Similarity=0.242  Sum_probs=81.3

Q ss_pred             EEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCcc-EEEE
Q 031118           30 LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTG-CVLC  104 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~-~~i~  104 (165)
                      |.|+  |+++|++||+++||+++......++    .   .+..+.+..++    ..+.+....+..  ....+++ .|++
T Consensus         2 l~V~--Dle~s~~FY~~~LG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~~~hla   70 (129)
T PRK10291          2 LRVG--DLQRSIDFYTNVLGMKLLRTSENPE----Y---KYSLAFVGYGPETEEAVIELTYNWGVD--KYELGTAYGHIA   70 (129)
T ss_pred             EEec--CHHHHHHHHHhccCCEEEEeecCCC----C---cEEEEEEccCCCCCcceEEeeecCCCC--CCcCCCCeeEEE
Confidence            4566  9999999999999999876543231    1   12233333332    223333222210  1122334 4999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCc-eEEEEEcCCCCeEEEEeeecccCC
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGE-RVGKVKDPYGFTWLICSPVKKCAG  162 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~-~~~~~~DP~G~~~~l~~~~~~~~~  162 (165)
                      |.|+|+++++++++++|+++..++...++   |. +.++|+||+||.|+|++......+
T Consensus        71 f~V~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~i~DPdG~~iel~~~~~~~~~  126 (129)
T PRK10291         71 LSVDNAAEACEKIRQNGGNVTREAGPVKG---GTTVIAFVEDPDGYKIELIEEKDAGRG  126 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCccccCCcccCC---CceEEEEEECCCCCEEEEEEccccccc
Confidence            99999999999999999999987776666   64 568899999999999997754433

>PLN02367 lactoylglutathione lyase

Probab=99.71  E-value=1.5e-15  Score=117.95  Aligned_cols=122  Identities=15%  Similarity=0.174  Sum_probs=84.1

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEE------------------EEC-CeEEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQL------------------EIA-GSTFL   83 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l------------------~~g-~~~l~   83 (165)
                      ..--++.|.|+  |++++++||+++||+++..+.+.++.       .+....|                  ..+ +..|.
T Consensus        74 ~~~~HtmlRVk--Dle~Sl~FYt~vLGm~ll~r~d~pe~-------~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LE  144 (233)
T PLN02367         74 YIMQQTMYRIK--DPKASLDFYSRVLGMSLLKRLDFPEM-------KFSLYFMGYEDTASAPTDPTERTVWTFGQKATIE  144 (233)
T ss_pred             cEEEEEEEEeC--CHHHHHHHHHHhcCCEEeEEEecCCC-------cEEEEEeecCCccccccccccceeeccCCCCEEE
Confidence            44444555555  99999999999999999887765531       1112222                  122 24666


Q ss_pred             EecCCCCCc-c---cccC----CccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118           84 VSDVSGDSA-A---AQTV----GTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus        84 l~d~~~~~~-~---~~~~----~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      |........ +   ....    +.++ ||+|.|+|++++++++.+.|++++.+|....+    .++++++|||||+|+|+
T Consensus       145 Lt~n~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~----~riaFIkDPDGn~IEL~  220 (233)
T PLN02367        145 LTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM----KGIAFIKDPDGYWIEIF  220 (233)
T ss_pred             EecCCCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc----eEEEEEECCCCCEEEEE
Confidence            654332110 0   0111    1344 99999999999999999999999988876544    37899999999999999


Q ss_pred             eee
Q 031118          155 SPV  157 (165)
Q Consensus       155 ~~~  157 (165)
                      +..
T Consensus       221 e~~  223 (233)
T PLN02367        221 DLK  223 (233)
T ss_pred             ecc
Confidence            865

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.70  E-value=2.5e-15  Score=104.47  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=78.4

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      ..|.++  |++++++||+++||+++......+.    +   ......+..++    ..|.+....+...+.....+..|+
T Consensus         4 v~i~v~--d~~~a~~fY~~~lG~~~~~~~~~~~----~---~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i   74 (121)
T cd07233           4 TMLRVK--DLEKSLDFYTDVLGMKLLRRKDFPE----G---KFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHL   74 (121)
T ss_pred             EEEEec--CcHHHHHHHHhccCCeEEEEEecCC----C---ceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEE
Confidence            445555  9999999999999999876542221    1   12223343322    345443322110111122344699


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          104 CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      +|.|+|+++++++++++|+++..+|... +   +.++++|+||+||+|+|+
T Consensus        75 ~~~v~did~~~~~l~~~G~~~~~~~~~~-~---~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          75 AFAVDDVYAACERLEEMGVEVTKPPGDG-G---MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             EEEeCCHHHHHHHHHHCCCEEeeCCccC-C---CceEEEEECCCCCEEEeC
Confidence            9999999999999999999999988766 4   668999999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2e-15  Score=103.91  Aligned_cols=113  Identities=19%  Similarity=0.235  Sum_probs=79.9

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC---CeEEEEecCCCCCcc-cccCCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA---GSTFLVSDVSGDSAA-AQTVGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g---~~~l~l~d~~~~~~~-~~~~~~~~~i~  104 (165)
                      .|.+.  |++++++||+++||+++.......    .+    ..+..+...   +..|++........+ ....+...+++
T Consensus         3 ~l~v~--d~~~~~~fY~~~lG~~~~~~~~~~----~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   72 (119)
T cd07263           3 SLYVD--DQDKALAFYTEKLGFEVREDVPMG----GG----FRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLV   72 (119)
T ss_pred             eEEeC--CHHHHHHHHHhccCeEEEEeeccC----CC----cEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEE
Confidence            45555  999999999999999987654211    11    224444332   345666543321110 12334566999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |.|+|+++++++++++|+++..+|....+   + +.++++||+||+|+|++
T Consensus        73 ~~v~di~~~~~~l~~~g~~~~~~~~~~~~---~-~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          73 LATDDIDATYEELKARGVEFSEEPREMPY---G-TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             EEehHHHHHHHHHHhCCCEEeeccccCCC---c-eEEEEECCCCCEEEEeC
Confidence            99999999999999999999988865555   5 89999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.2e-15  Score=105.93  Aligned_cols=111  Identities=17%  Similarity=0.150  Sum_probs=77.1

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCC--CCc--c--cccCCc
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSG--DSA--A--AQTVGT   99 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~--~~~--~--~~~~~~   99 (165)
                      .+.|.|+  |+++|++||++ |||+.......+     +      ...+..+ +..|++.....  ...  +  ....++
T Consensus         3 ~v~l~V~--Dl~~s~~FY~~-lGf~~~~~~~~~-----~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   68 (124)
T cd09012           3 FINLPVK--DLEKSTAFYTA-LGFEFNPQFSDE-----K------AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKST   68 (124)
T ss_pred             EEEeecC--CHHHHHHHHHH-CCCEEccccCCC-----C------eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCC
Confidence            4455566  99999999986 999876432111     1      2333444 45666644211  000  0  123445


Q ss_pred             cEEEEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          100 GCVLCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       100 ~~~i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ..|++|.|+   ++++++++++++|+++..+|...+|   + +.++|+|||||+|+|++
T Consensus        69 ~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~---~-~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          69 EVLISLSADSREEVDELVEKALAAGGKEFREPQDHGF---M-YGRSFADLDGHLWEVLW  123 (124)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc---e-EEEEEECCCCCEEEEEE
Confidence            679999998   4778899999999999999988876   5 67899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=5e-15  Score=106.33  Aligned_cols=124  Identities=18%  Similarity=0.174  Sum_probs=81.1

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCccc---ccCC-CCceEEEEEEE--CCeEEEEecCC-CCC--cc--cc
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRK---AEQE-LPLISCAQLEI--AGSTFLVSDVS-GDS--AA--AQ   95 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~---~~g~-~~~v~~~~l~~--g~~~l~l~d~~-~~~--~~--~~   95 (165)
                      +..|.|+  |++++++||++ |||++..+...+...   ..+. ........+..  ++..|.+.... +..  .+  ..
T Consensus         6 Hi~i~v~--Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           6 NVGIVVR--DLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eEEEEeC--CHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            4455555  99999999998 999886553221100   0010 01122333433  33455544321 111  10  11


Q ss_pred             cCCc-cEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           96 TVGT-GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        96 ~~~~-~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ..+. ..||+|.|+|+++++++++++|++++.++....+   |.+.++|+||+|+.|||++.
T Consensus        83 ~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~---~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          83 VNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYEN---SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCC---CeEEEEEECCCCCEEEeeec
Confidence            2223 3499999999999999999999999988777777   88999999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.67  E-value=5.6e-15  Score=104.78  Aligned_cols=122  Identities=21%  Similarity=0.236  Sum_probs=87.7

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe-EEEEecCCCCCcccccCCc
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS-TFLVSDVSGDSAAAQTVGT   99 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~-~l~l~d~~~~~~~~~~~~~   99 (165)
                      ++|+..+.+.-+.+.|++++++||.++||++.....++.+         ..+..+..++. .--.....+.   ....++
T Consensus         4 ~~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~---------~~y~~f~~~~~~~gG~l~~~~~---~~p~~~   71 (127)
T COG3324           4 AGEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE---------MRYAVFPADGAGAGGGLMARPG---SPPGGG   71 (127)
T ss_pred             cccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC---------ceEEEEECCCccccceeccCCc---CCCCCC
Confidence            3455555565555559999999999999999865432211         22555544431 1111111111   011278


Q ss_pred             cEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       100 ~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++.++|.|+|+++.++|+.++|++|+.++...+.   +.+.+.+.||.||+|.|+++.
T Consensus        72 ~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~---~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          72 GWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPG---GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CEEEEEecCChHHHHHHHHhcCCeEEecccccCC---ceEEEEEECCCCCEEEEeecC
Confidence            8999999999999999999999999999999996   669999999999999999864

>PRK11478 putative lyase; Provisional

Probab=99.66  E-value=7.5e-15  Score=103.45  Aligned_cols=118  Identities=16%  Similarity=0.189  Sum_probs=76.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-eEEEEecCC-CCCcccccCCcc-EEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-STFLVSDVS-GDSAAAQTVGTG-CVLC  104 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~~l~l~d~~-~~~~~~~~~~~~-~~i~  104 (165)
                      .++.+.++|++++++||+++||+++..+...+.   ..  .+  ...+..++ ..|.+.... +...+......+ .||+
T Consensus         8 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~---~~--~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          8 HHIAIIATDYAVSKAFYCDILGFTLQSEVYREA---RD--SW--KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             cEEEEEcCCHHHHHHHHHHHhCCEecccccccc---cc--cc--eeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            344555559999999999999999864321110   00  01  12222333 345443321 111111112233 4999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |.|+|+++++++++++|+++...+...++   |.+++||+||+||.|+|++
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYT---QKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCC---CCEEEEEECCCCCEEEEEe
Confidence            99999999999999999998755545556   7899999999999999986

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.66  E-value=6.8e-15  Score=105.90  Aligned_cols=114  Identities=11%  Similarity=0.159  Sum_probs=81.2

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ..++.+.++|++++.+||+++||+++..+.        +     ..+.+..++..+.+.... ........+...|++|.
T Consensus         5 i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~--------~-----~~~~~~~~g~~l~l~~~~-~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          5 INHICFSVSNLEKSIEFYEKVLGAKLLVKG--------R-----KTAYFDLNGLWIALNEEK-DIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             EEEEEEEecCHHHHHHHHHhccCCEEEeec--------C-----eeEEEecCCeEEEeeccC-CCCCccCCCCeeEEEEE
Confidence            345555555999999999999999986441        1     134456677666654321 11001111223478888


Q ss_pred             eC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++  |++++++++.++|+++..+|...++   +.+.++|+||+||+|+|++..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~---~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDER---DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCC---CceEEEEECCCCCEEEEEeCC
Confidence            77  9999999999999999877777777   779999999999999998754

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.7e-15  Score=102.89  Aligned_cols=111  Identities=22%  Similarity=0.286  Sum_probs=80.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC---CCc-c-cccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG---DSA-A-AQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~---~~~-~-~~~~~~~~~  102 (165)
                      +.|.|+  |++++.+||+++||+++...   +    .+     .+..+..++..+.+.....   ... + .....++.+
T Consensus         2 i~l~v~--d~~~a~~FY~~~lg~~~~~~---~----~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   67 (121)
T cd07251           2 ITLGVA--DLARSRAFYEALLGWKPSAD---S----ND-----GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGIT   67 (121)
T ss_pred             eeEeeC--CHHHHHHHHHHhcCceeccc---C----CC-----ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceE
Confidence            346666  99999999999999988644   1    11     1344455776666543211   001 1 122345566


Q ss_pred             EEEEe---CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          103 LCLET---EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       103 i~~~V---~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +++.+   +|++++++++++.|+++..+|...+|   |.+.++++||+||+|+|..
T Consensus        68 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          68 LAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFW---GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             EEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCC---CceEEEEECCCCCEEEEee
Confidence            77665   57888999999999999998888888   8899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.65  E-value=5.8e-15  Score=103.54  Aligned_cols=116  Identities=19%  Similarity=0.256  Sum_probs=80.6

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc----cccCCccE-E
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA----AQTVGTGC-V  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~----~~~~~~~~-~  102 (165)
                      ..|.|+  |++++++||+++||++.......+.    .   ......+..++..|.+........+    ....+.+. |
T Consensus         5 v~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~----~---~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~   75 (128)
T TIGR03081         5 VGIAVP--DLEEAAKLYEDVLGAHVSHIEEVPE----Q---GVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHH   75 (128)
T ss_pred             EEEEeC--CHHHHHHHHHHHhCCCCccceeCCC----C---CcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEE
Confidence            445566  9999999999999998865432221    1   1223445556666666443211110    01113344 8


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEec-CcccccccCCceEEEE--EcCCCCeEEEEe
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGE-LAEGNGACCGERVGKV--KDPYGFTWLICS  155 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~-p~~~~~~~~G~~~~~~--~DP~G~~~~l~~  155 (165)
                      ++|.|+|++++++++.++|++++.+ |...+|   |.+.+++  +||+|+.||+.+
T Consensus        76 i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~---g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        76 IAIEVDDIEAALETLKEKGVRLIDEEPRIGAG---GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEEcCCHHHHHHHHHHCCCcccCCCCccCCC---CCEEEEecccccCcEEEEecC
Confidence            9999999999999999999999875 777778   8777788  899999999864

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.8e-14  Score=100.07  Aligned_cols=117  Identities=17%  Similarity=0.176  Sum_probs=77.3

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCC-CCCccc-ccCCccEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVS-GDSAAA-QTVGTGCVLCL  105 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~-~~~~~~-~~~~~~~~i~~  105 (165)
                      ++.+.+.|++++++||+++||+++......+.    ..   .....+.. ++..|.+.... ....+. .......|++|
T Consensus         6 hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~----~~---~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           6 HVAIICSDYEKSKEFYVEILGFKVIREVYRPE----RG---SYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             eEEEEcCCHHHHHHHHHHhcCCEEeeeeecCC----CC---cEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            33444449999999999999999865532111    10   11112222 34444432211 111111 12223348999


Q ss_pred             EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          106 ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       106 ~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .|+|+++++++++++|+++..++....+   |.+.++++||+||.|+|.+
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEFT---GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCC---ceEEEEEECCCCCEEEecC
Confidence            9999999999999999999887766667   8889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.3e-14  Score=101.02  Aligned_cols=116  Identities=16%  Similarity=0.158  Sum_probs=76.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCCCCCcc--cccCCccEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVSGDSAA--AQTVGTGCVL  103 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~~~~~~--~~~~~~~~~i  103 (165)
                      +..|.|+  |++++++||+++||+++......+.   .+    .....+.. ++..|.+.........  ....++..|+
T Consensus         4 Hi~l~v~--dl~~s~~FY~~~lg~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi   74 (125)
T cd07241           4 HVAIWTK--DLERMKAFYVTYFGATSNEKYHNPR---KG----FESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHL   74 (125)
T ss_pred             EEEEEec--CHHHHHHHHHHHhCCEeeceEeCCC---CC----ceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEE
Confidence            3455555  9999999999999998764432221   11    11122333 3345555432111000  1122334589


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          104 CLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       104 ~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      +|.|+|   +++.+++++++|+++..+|...++   |.+.++++||+||.|+|.
T Consensus        75 ~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~---g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          75 AFSVGSKEAVDELTERLRADGYLIIGEPRTTGD---GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEeCceecCC---CeEEEEEECCCCCEEEeC
Confidence            999964   788899999999999988876667   767788999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.64  E-value=4.6e-14  Score=102.80  Aligned_cols=125  Identities=15%  Similarity=0.133  Sum_probs=81.8

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVG   98 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~   98 (165)
                      ++-.++.|.++  |+++|++||+++||+++....+.+.    +   ......+..++    ..+.+....... +.....
T Consensus        16 ~~i~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~   85 (150)
T TIGR00068        16 RRLLHTMLRVG--DLDKSLDFYTEVLGMKLLRKRDFPE----M---KFSLAFLGYGDETSAAVIELTHNWGTE-KYDLGN   85 (150)
T ss_pred             ceEEEEEEEec--CHHHHHHHHHHhcCCEEEEEeccCC----C---ceEEEEecCCCCCCccEEEEeecCCCC-cccCCC
Confidence            34455555566  9999999999999999876543231    1   11222232221    233332221110 011122


Q ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           99 TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        99 ~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      ...|++|.|+|++++++++.++|++++.+|...++  .+.+.+||+||+||.|+|++....
T Consensus        86 g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRALGGNVVREPGPVKG--GTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHHcCCccccCCcccCC--CceEEEEEECCCCCEEEEEECCch
Confidence            34589999999999999999999999988865554  034688999999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=6.2e-15  Score=102.98  Aligned_cols=113  Identities=20%  Similarity=0.138  Sum_probs=71.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEE--ecCC-CCC--cc-cc--cCCc
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLV--SDVS-GDS--AA-AQ--TVGT   99 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l--~d~~-~~~--~~-~~--~~~~   99 (165)
                      ..|.|+  |+++|++||+++||+++....       +.      +..+..++..+.+  .... ...  .. ..  ....
T Consensus         3 i~l~v~--Dl~~s~~FY~~~lG~~~~~~~-------~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   67 (125)
T cd08357           3 LAIPVR--DLEAARAFYGDVLGCKEGRSS-------ET------WVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVP   67 (125)
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEeecc-------CC------cccccccCcEEEEEeccCCCcccccCCCCCCccCCc
Confidence            344555  999999999999999986431       11      2233333433332  1111 000  00 01  1122


Q ss_pred             cEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccc-cCCceEEEEEcCCCCeEEEEe
Q 031118          100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGA-CCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       100 ~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~-~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ++.+++.++|+++++++++++|+++..+|....+. -.+.+.++|+||+||+|+|..
T Consensus        68 h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          68 HFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            34456778999999999999999999877653220 004689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=2.5e-14  Score=99.37  Aligned_cols=115  Identities=20%  Similarity=0.211  Sum_probs=79.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc--cccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA--AQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~--~~~~~~~~~i~~  105 (165)
                      ..|.++  |++++++||+++||++.......           ..+..+..++..+.+........+  ........|++|
T Consensus         7 i~l~v~--d~~~s~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           7 VVLTVA--DIEATLDFYTRVLGMEVVRFGEE-----------VGRKALRFGSQKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             EEEEec--CHHHHHHHHHHHhCceeeccccc-----------CCceEEEeCCEEEEEecCCCccCcCccCCCCCCceEEE
Confidence            344555  99999999999999988654210           014455666666666543321111  122234459999


Q ss_pred             EeCC-HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          106 ETED-VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       106 ~V~d-v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .+++ ++++++++.++|++++.+|...+....+.+.++|+||+||+|++++
T Consensus        74 ~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9975 9999999999999998877654320003478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.63  E-value=2.3e-14  Score=100.79  Aligned_cols=109  Identities=14%  Similarity=0.070  Sum_probs=77.1

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |+...+.|.|+  |+++|++||+++||++.....        +   .  +..+..+ +..|.+....       ......
T Consensus         3 ~~~~hv~l~v~--Dl~~s~~FY~~~lG~~~~~~~--------~---~--~~~~~~~~~~~l~~~~~~-------~~~~~~   60 (123)
T cd08351           3 VTLNHTIVPAR--DREASAEFYAEILGLPWAKPF--------G---P--FAVVKLDNGVSLDFAQPD-------GEIPPQ   60 (123)
T ss_pred             ceEeEEEEEcC--CHHHHHHHHHHhcCCEeeecc--------C---C--EEEEEcCCCcEEEEecCC-------CCCCcc
Confidence            44455555555  999999999999999886531        1   0  2223332 3345444321       112345


Q ss_pred             EEEEEeC--CHHHHHHHHHHCCCeEEecCccc-------ccccCCceEEEEEcCCCCeEEEEee
Q 031118          102 VLCLETE--DVEAAVAKAVSAGAVAEGELAEG-------NGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       102 ~i~~~V~--dv~~~~~~~~~~G~~i~~~p~~~-------~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |++|.|+  |++++++++.+.|+++..+|...       .+   |.+.++|+||+||.|+|++.
T Consensus        61 h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~---g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          61 HYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTND---GGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCC---CeeEEEEECCCCCEEEEEec
Confidence            7777776  69999999999999998777654       45   77999999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=9.8e-15  Score=99.30  Aligned_cols=111  Identities=19%  Similarity=0.184  Sum_probs=76.0

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe-EEEEecCCCCCcccccCCccEEEEEEe
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS-TFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~-~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      |+.+.++|++++++||+++||++.......+     .     ....+..++. .+.+.............+...|++|.|
T Consensus         3 Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----~-----~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v   72 (114)
T cd07245           3 HVALRVPDLEASRAFYTDVLGLEEGPRPPFL-----F-----PGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRV   72 (114)
T ss_pred             eEEEecCCHHHHHHHHHHccCCcccCcCCCC-----C-----CceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEe
Confidence            3444445999999999999999876432111     0     1223344443 555543322110011234456999999


Q ss_pred             CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEE
Q 031118          108 EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI  153 (165)
Q Consensus       108 ~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l  153 (165)
                      +|++++++++.++|++++.++.. .+   +.+.++|+||+|++|+|
T Consensus        73 ~d~~~~~~~l~~~g~~~~~~~~~-~~---~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          73 DDLDAFRARLKAAGVPYTESDVP-GD---GVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             CCHHHHHHHHHHcCCCcccccCC-CC---CccEEEEECCCCCEEeC
Confidence            99999999999999999887765 45   66889999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.62  E-value=6.5e-14  Score=106.00  Aligned_cols=126  Identities=13%  Similarity=0.135  Sum_probs=81.7

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEE-----------------EEECCeEEE
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQ-----------------LEIAGSTFL   83 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~-----------------l~~g~~~l~   83 (165)
                      .|.+--++.|.|.  |+++|++||+++|||++..+...++    +. ..+.+..                 +..++..|.
T Consensus        24 ~~~~~~Ht~i~V~--Dle~Si~FY~~vLG~~~~~r~~~~~----~~-~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lE   96 (185)
T PLN03042         24 KGYIMQQTMFRIK--DPKASLDFYSRVLGMSLLKRLDFPE----MK-FSLYFLGYEDSETAPTDPPERTVWTFGRKATIE   96 (185)
T ss_pred             CCcEEEEEEEeeC--CHHHHHHHHHhhcCCEEEEEEEcCC----Cc-eEEEEEecCCcccCCcchhhcccccccCCCEEE
Confidence            3445555555555  9999999999999999987754332    10 0111111                 011233555


Q ss_pred             EecCCCCCc-c-------cccCCcc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118           84 VSDVSGDSA-A-------AQTVGTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus        84 l~d~~~~~~-~-------~~~~~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      |........ +       ....+.+ .||+|.|+|++++++++.+.|+.+...|....    +.++++|+||+||+|+|+
T Consensus        97 L~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~----~~~~~fi~DPdG~~IEl~  172 (185)
T PLN03042         97 LTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK----MKGLAFIKDPDGYWIEIF  172 (185)
T ss_pred             EEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC----ceeEEEEECCCCCEEEEE
Confidence            543211100 0       0111124 48999999999999999999999997775432    347889999999999999


Q ss_pred             eee
Q 031118          155 SPV  157 (165)
Q Consensus       155 ~~~  157 (165)
                      +..
T Consensus       173 e~~  175 (185)
T PLN03042        173 DLK  175 (185)
T ss_pred             ECC
Confidence            854

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.62  E-value=4.3e-14  Score=104.61  Aligned_cols=132  Identities=17%  Similarity=0.150  Sum_probs=79.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEee--cCc--ccc-------cCCCCceEEEEEEECC-eEEEEecCC-CCCc--
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSV--ETK--RKA-------EQELPLISCAQLEIAG-STFLVSDVS-GDSA--   92 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~--~~~--~~~-------~g~~~~v~~~~l~~g~-~~l~l~d~~-~~~~--   92 (165)
                      -|+.+.|.|+++|++||+++||+++..+..  .+.  ...       .+....+..+.+..++ ..|.+.... +...  
T Consensus         6 ~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~~~~   85 (162)
T TIGR03645         6 SHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQENPED   85 (162)
T ss_pred             EEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCCCCc
Confidence            344455559999999999999998864310  010  000       0000123345555443 345554332 1110  


Q ss_pred             c-cccCCccEEEEEEeCCHHHHHHHHHHCCCeEEecC-cccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           93 A-AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGEL-AEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        93 ~-~~~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p-~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      . ........||+|.|+|+++++++++++|+++..++ ........+.+.++|+|||||.|+|+++..+
T Consensus        86 ~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        86 NFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             ccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            0 11123456999999999999999999999865543 2111100023789999999999999998754

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.9e-14  Score=99.12  Aligned_cols=113  Identities=19%  Similarity=0.262  Sum_probs=77.9

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-eEEEEecCCCCC--c---ccccCCc
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-STFLVSDVSGDS--A---AAQTVGT   99 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~~l~l~d~~~~~--~---~~~~~~~   99 (165)
                      +.++|.+.  |++++++||+++|||++...   +    ++     .++.+..++ ..+.+.......  .   +......
T Consensus         2 ~~~~l~v~--d~~~s~~Fy~~~lG~~~~~~---~----~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   67 (122)
T cd08354           2 LETALYVD--DLEAAEAFYEDVLGLELMLK---E----DR-----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSG   67 (122)
T ss_pred             eEEEEEeC--CHHHHHHHHHhccCCEEeec---C----CC-----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCC
Confidence            45677777  99999999999999998753   1    11     145556655 444443321100  0   0111223


Q ss_pred             cEEEEEEe--CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          100 GCVLCLET--EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       100 ~~~i~~~V--~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ..|++|.+  +|++++++++.++|+++..++. ..+   +.+.++|+||+||+|+|+++
T Consensus        68 ~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~---~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          68 PGHFAFAIPAEELAEWEAHLEAKGVAIESEVQ-WPR---GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             ccEEEEEcCHHHHHHHHHHHHhcCCceecccc-CCC---CeeEEEEECCCCCEEEEecC
Confidence            34777777  5799999999999999876664 455   66889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.61  E-value=2.4e-14  Score=102.16  Aligned_cols=111  Identities=14%  Similarity=0.148  Sum_probs=77.7

Q ss_pred             EEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEeCC
Q 031118           30 LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETED  109 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V~d  109 (165)
                      +.+.+.|++++++||+++||+++....  +     .      ...+..++..+.+........ ....+...||+|.|++
T Consensus         4 V~l~V~Dl~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hiaf~v~~   69 (131)
T cd08363           4 MTFSVSNLDKSISFYKHVFMEKLLVLG--E-----K------TAYFTIGGTWLALNEEPDIPR-NEIRQSYTHIAFTIED   69 (131)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEeccC--C-----c------cceEeeCceEEEEEccCCCCc-CCcCccceEEEEEecH
Confidence            334444999999999999999876431  1     1      233455666665543221100 1112334589998874


Q ss_pred             --HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          110 --VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       110 --v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                        ++++++++.++|+++..++....+   +.+.++|+||+||+|+|++..
T Consensus        70 ~dld~~~~~l~~~G~~~~~~~~~~~~---~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          70 SEFDAFYTRLKEAGVNILPGRKRDVR---DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHHcCCcccCCCccccC---cceEEEEECCCCCEEEEecCc
Confidence              999999999999998766665555   668999999999999999865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PRK06724 hypothetical protein; Provisional

Probab=99.61  E-value=3.7e-14  Score=101.28  Aligned_cols=111  Identities=14%  Similarity=0.149  Sum_probs=75.2

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhh---CCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAF---GAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT   99 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vl---G~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~   99 (165)
                      |..-+.++.+.|.|+++|++||+++|   |++.....                 .+.-++..|.+...... .  ....+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~-----------------~~~~g~~~l~l~~~~~~-~--~~~~g   63 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV-----------------AYSTGESEIYFKEVDEE-I--VRTLG   63 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE-----------------eeeCCCeeEEEecCCcc-c--cCCCC
Confidence            55556677776779999999999977   44432111                 01112233443321110 0  11233


Q ss_pred             cEEEEEEe---CCHHHHHHHHHHCCCeEEecCcccc---cccCCceEEEEEcCCCCeEEEEee
Q 031118          100 GCVLCLET---EDVEAAVAKAVSAGAVAEGELAEGN---GACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       100 ~~~i~~~V---~dv~~~~~~~~~~G~~i~~~p~~~~---~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ..|++|.|   +++++++++++++|++++.+|...+   +   |.+.++|+|||||.|+|...
T Consensus        64 ~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~---g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         64 PRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSE---GYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             ceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCC---CEEEEEEECCCCCEEEEEeC
Confidence            45999998   6799999999999999988876543   5   66888999999999999876

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.61  E-value=2.8e-14  Score=98.16  Aligned_cols=106  Identities=20%  Similarity=0.227  Sum_probs=73.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEe-
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLET-  107 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V-  107 (165)
                      .|.|+  |++++++||+++||+++....       ++      ...+..++..|.+......   ....+...|++|.| 
T Consensus         3 ~l~v~--d~~~s~~Fy~~~lg~~~~~~~-------~~------~~~~~~~~~~l~~~~~~~~---~~~~~~~~hiaf~v~   64 (113)
T cd08345           3 TLIVK--DLNKSIAFYRDILGAELIYSS-------SK------EAYFELAGLWICLMEEDSL---QGPERTYTHIAFQIQ   64 (113)
T ss_pred             eEEEC--CHHHHHHHHHHhcCCeeeecc-------Cc------eeEEEecCeEEEeccCCCc---CCCCCCccEEEEEcC
Confidence            45566  999999999999999886542       11      2233445555555332211   01122334888888 


Q ss_pred             -CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          108 -EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       108 -~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                       +|++++++++.++|+++..++....+   +.+.++++||+||+|+|+.
T Consensus        65 ~~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          65 SEEFDEYTERLKALGVEMKPERPRVQG---EGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHHHHHHHHcCCccCCCccccCC---CceEEEEECCCCCEEEEEe
Confidence             47888999999999998755433334   4589999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.58  E-value=1.1e-13  Score=92.96  Aligned_cols=110  Identities=28%  Similarity=0.332  Sum_probs=81.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEeC
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLETE  108 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V~  108 (165)
                      .|.+.  |++++++||+++||++.......      .   ...+..+..++..|.+....+... ....+...|++|.|+
T Consensus         3 ~i~~~--d~~~~~~fy~~~lg~~~~~~~~~------~---~~~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~v~   70 (112)
T cd06587           3 GLTVS--DLEAAVAFYEEVLGFEVLFRNGN------G---GAEFAVLGLGGTRLELFEGDEPAP-APSGGGGVHLAFEVD   70 (112)
T ss_pred             ceeeC--CHHHHHHHHHhccCCEEEEeecc------C---CEEEEEEecCCceEEEecCCCCCC-cccCCCeeEEEEECC
Confidence            34455  99999999999999988765321      0   123556666667777766543210 012344569999999


Q ss_pred             CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEE
Q 031118          109 DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI  153 (165)
Q Consensus       109 dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l  153 (165)
                      |++++++++.++|+.+..++....+   +.+.++++||+|+.|+|
T Consensus        71 ~~~~~~~~l~~~g~~~~~~~~~~~~---~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          71 DVDAAYERLKAAGVEVLGEPREEPW---GGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             CHHHHHHHHHHcCCcccCCCcCCCC---CcEEEEEECCCCcEEeC
Confidence            9999999999999999988764556   77999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=2.2e-13  Score=94.99  Aligned_cols=112  Identities=21%  Similarity=0.266  Sum_probs=76.7

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      ++++.|.++  |++++.+||+++||++.....  +     +      +..+..++.  .+.+.....     ...+...|
T Consensus         2 ~~hv~l~v~--d~~~a~~FY~~~lG~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h   61 (120)
T cd07254           2 RFHVALNVD--DLEASIAFYSKLFGVEPTKVR--D-----D------YAKFLLEDPRLNFVLNERPG-----APGGGLNH   61 (120)
T ss_pred             cEEEEEEeC--CHHHHHHHHHHHhCCeEeccc--C-----C------eeEEEecCCceEEEEecCCC-----CCCCCeeE
Confidence            467777777  999999999999999875442  1     1      222333332  333332211     11134458


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+|   +++.++++.++|.++..+|....+ ..+.+.+|++||+||+|+|++..
T Consensus        62 ~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          62 LGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCC-YAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccc-cCCcceEEEECCCCCEEEEEEee
Confidence            9999988   677899999999999877755432 00247899999999999999764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.57  E-value=2.6e-13  Score=96.72  Aligned_cols=121  Identities=12%  Similarity=0.016  Sum_probs=76.8

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      |..-+-++.+.++|++++++||+++||+++..+.. ... +..  ...  ..+..++..|.+....+     ...+...|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~-~~~-~~~--~~~--~~~~~~~~~i~l~~~~~-----~~~~~~~H   69 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSG-DKT-FSL--SKE--KFFLIGGLWIAIMEGDS-----LQERTYNH   69 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecc-ccc-ccc--cce--eEEEcCCeEEEEecCCC-----CCCCCceE
Confidence            33334556666669999999999999998765421 000 000  000  11223555555543221     11223458


Q ss_pred             EEEEeC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+  +++++++++.++|..+..+. ...+  ++.+.+||+||+||.|||....
T Consensus        70 iaf~v~~~~ld~~~~~l~~~gv~~~~~~-~~~~--~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          70 IAFKISDSDVDEYTERIKALGVEMKPPR-PRVQ--GEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EEEEcCHHHHHHHHHHHHHCCCEEecCC-cccc--CCceEEEEECCCCCEEEEecCC
Confidence            999998  79999999999999876433 3233  0348999999999999998754

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=2.5e-13  Score=94.96  Aligned_cols=112  Identities=21%  Similarity=0.243  Sum_probs=73.4

Q ss_pred             EEEecCCHHHHHHHHHHh---hCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCCCCCcccccCCccEEEE
Q 031118           30 LLVEAPKATDAVQFYKTA---FGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~v---lG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +.+.+.|+++|++||+++   ||++.....  +    ++      +..+..+  +..+.+....+..  ....++..||+
T Consensus         4 v~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~----~~------~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~hi~   69 (123)
T cd07262           4 VTLGVNDLERARAFYDAVLAPLGIKRVMED--G----PG------AVGYGKGGGGPDFWVTKPFDGE--PATAGNGTHVA   69 (123)
T ss_pred             EEEecCcHHHHHHHHHHHHhhcCceEEeec--C----Cc------eeEeccCCCCceEEEeccccCC--CCCCCCceEEE
Confidence            344444999999999999   588876442  1    11      2222222  3456654432110  11233457999


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |.|+|   ++++++++.++|+++..+|...++...+.+.++|+||+||.|+|+.
T Consensus        70 f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          70 FAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             EECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            99987   6777999999999998888765430003357899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.54  E-value=6.1e-13  Score=93.07  Aligned_cols=108  Identities=19%  Similarity=0.181  Sum_probs=72.6

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-C---CeEEEEecCCCCCcccccCCccE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-A---GSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g---~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      -.+.|.|+  |+++|++||+++||+++....  +    .+      ...+.. +   ...+.+...        ...+..
T Consensus         6 ~hv~l~v~--Dl~~s~~FY~~~lG~~~~~~~--~----~~------~~~~~~~~~~~~~~~~l~~~--------~~~~~~   63 (122)
T cd07265           6 GHVQLRVL--DLEEAIKHYREVLGLDEVGRD--D----QG------RVYLKAWDEFDHHSIVLREA--------DTAGLD   63 (122)
T ss_pred             eEEEEEeC--CHHHHHHHHHhccCCEeeeec--C----Cc------eEEEEccCCCcccEEEeccC--------CCCCee
Confidence            34455555  999999999999999876542  1    11      122222 1   123444211        112345


Q ss_pred             EEEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |++|.|.   |++++++++.++|+++...|....+  +..+.+||+||+||+|+|++..
T Consensus        64 hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          64 FMGFKVLDDADLEKLEARLQAYGVAVERIPAGELP--GVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCC--CCceEEEEECCCCCEEEEEEec
Confidence            8999997   6888899999999998876654333  0247899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.1e-12  Score=91.75  Aligned_cols=111  Identities=16%  Similarity=0.187  Sum_probs=74.5

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ...|.++  |++++.+||+++||+++....  +     .      ...+..++  ..|.+..............+..|++
T Consensus         5 hi~l~v~--d~~~~~~Fy~~~lG~~~~~~~--~-----~------~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~   69 (125)
T cd07255           5 AVTLRVA--DLERSLAFYQDVLGLEVLERT--D-----S------TAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFA   69 (125)
T ss_pred             EEEEEEC--CHHHHHHHHHhccCcEEEEcC--C-----C------EEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEE
Confidence            3445555  999999999999999987542  1     1      33344444  3454533321100012334456999


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|.|   ++++++++.++|+++.. +....+   + +.+||+||+||+|+|.+..
T Consensus        70 f~v~~~~~v~~~~~~l~~~g~~~~~-~~~~~~---~-~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          70 ILLPSRADLAAALRRLIELGIPLVG-ASDHLV---S-EALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             EECCCHHHHHHHHHHHHHcCCceec-cccccc---e-eEEEEECCCCCEEEEEEec
Confidence            99975   88889999999998754 444444   4 7889999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.54  E-value=7.3e-13  Score=94.12  Aligned_cols=113  Identities=13%  Similarity=0.081  Sum_probs=76.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ..|.|+  |+++|++||+++||++.......+     +   ......+..++.  .|.+...       ...+...|++|
T Consensus         3 v~l~V~--dl~~a~~Fy~~~lG~~~~~~~~~~-----~---~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~hl~~   65 (131)
T cd08343           3 VVLRTP--DVAATAAFYTEVLGFRVSDRVGDP-----G---VDAAAFLRCDEDHHDLALFPG-------PERPGLHHVAF   65 (131)
T ss_pred             EEEEcC--CHHHHHHHHHhcCCCEEEEEEccC-----C---ceeEEEEEcCCCcceEEEEcC-------CCCCCeeEEEE
Confidence            345555  999999999999999986553211     1   112334444432  2222211       01234558999


Q ss_pred             EeCCHH---HHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          106 ETEDVE---AAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       106 ~V~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      .|+|++   ++++++.++|++++.+|...++  .+.++++|+||+||+|+|++....
T Consensus        66 ~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~--~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          66 EVESLDDILRAADRLAANGIQIEFGPGRHGP--GNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeeEECCCccCC--CCcEEEEEECCCCCEEEEEcCCcc
Confidence            999875   5689999999999988876554  035788999999999999976643

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=9.3e-13  Score=92.57  Aligned_cols=113  Identities=20%  Similarity=0.227  Sum_probs=76.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhh---CCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc-cccCCcc-EE
Q 031118           28 PQLLVEAPKATDAVQFYKTAF---GAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA-AQTVGTG-CV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vl---G~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~-~~~~~~~-~~  102 (165)
                      ..|.++  |++++.+||+++|   |+++....  +    .+    ..+... .++..|.+........+ ....+++ .|
T Consensus         5 v~i~v~--d~~~~~~Fy~~~l~~~G~~~~~~~--~----~~----~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~~g~~h   71 (128)
T cd07242           5 VELTVR--DLERSRAFYDWLLGLLGFEEVKEW--E----DG----RSWRAG-DGGTYLVLQQADGESAGRHDRRNPGLHH   71 (128)
T ss_pred             EEEEeC--CHHHHHHHHHHHHhhcCCEEEEee--c----cC----ceEEec-CCceEEEEEecccCCCcccccCCcCeeE
Confidence            345555  9999999999999   99987653  1    11    112222 24556666543321100 1122333 48


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCccc---ccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEG---NGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~---~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|   ++++++++.++|+.+..++...   ..   +.+.++++||+||+|+|+.+
T Consensus        72 ia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~---~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          72 LAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGP---GYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCC---cEEEEEEECCCCcEEEEEeC
Confidence            9999975   7888999999999999877653   22   55899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.53  E-value=8.3e-13  Score=91.10  Aligned_cols=104  Identities=21%  Similarity=0.260  Sum_probs=75.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-C--eEEEEecCCCCCcccccCCccEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-G--STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~--~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      .+.|.++  |++++++||+++||+++....  +     .      ...+..+ +  ..|.+....        .....|+
T Consensus         5 hv~l~v~--d~~~~~~FY~~~lg~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~--------~~~~~h~   61 (117)
T cd07240           5 YAELEVP--DLERALEFYTDVLGLTVLDRD--A-----G------SVYLRCSEDDHHSLVLTEGD--------EPGVDAL   61 (117)
T ss_pred             EEEEecC--CHHHHHHHHHhccCcEEEeec--C-----C------eEEEecCCCCcEEEEEEeCC--------CCCceeE
Confidence            3445555  999999999999999987552  1     1      2333333 2  234443221        1244689


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          104 CLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       104 ~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +|.|.   ++++.++++.++|+++...|...++   +.+.++++||+||+|+++..
T Consensus        62 ~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~---~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          62 GFEVASEEDLEALAAHLEAAGVAPEEASDPEPG---VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceEEcCccCCC---CceEEEEECCCCCEEEEEEc
Confidence            99997   5788899999999999988876777   77999999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.53  E-value=3.8e-13  Score=93.41  Aligned_cols=105  Identities=19%  Similarity=0.255  Sum_probs=72.5

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EE-EEecCCCCCcccccCCccEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TF-LVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l-~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ++.+.+.|++++++||+++||++.....       .+      +..+..++.  .+ .+...        ..+...|++|
T Consensus         6 hv~l~v~d~~~s~~FY~~~lG~~~~~~~-------~~------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~   64 (120)
T cd08362           6 GVGLGVPDLAAAAAFYREVWGLSVVAED-------DG------IVYLRATGSEHHILRLRRS--------DRNRLDVVSF   64 (120)
T ss_pred             EEEEecCCHHHHHHHHHhCcCcEEEEec-------CC------EEEEECCCCccEEEEeccC--------CCCCCceEEE
Confidence            3444444999999999999999986442       11      333333322  11 12111        1123358999


Q ss_pred             Ee---CCHHHHHHHHHHCCCeEEecCc--ccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ET---EDVEAAVAKAVSAGAVAEGELA--EGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V---~dv~~~~~~~~~~G~~i~~~p~--~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|   +++++++++++++|+++..+|.  ..+|   +.+.++|+||+||+|+|++..
T Consensus        65 ~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~---~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          65 SVASRADVDALARQVAARGGTVLSEPGATDDPG---GGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCC---CceEEEEECCCCCEEEEEecc
Confidence            99   4688889999999999887764  3456   778999999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.53  E-value=6.4e-13  Score=92.46  Aligned_cols=114  Identities=17%  Similarity=0.222  Sum_probs=73.4

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE----CCeEEEEecCCCCCc-ccccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI----AGSTFLVSDVSGDSA-AAQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~----g~~~l~l~d~~~~~~-~~~~~~~~~~  102 (165)
                      +.|.|.  |++++++||+++||++.......+.    +.  ...+..+..    ++..|.+........ .....+...|
T Consensus         5 v~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~h   76 (126)
T cd08346           5 VTLITR--DAQETVDFYTDVLGLRLVKKTVNQD----DP--GTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHH   76 (126)
T ss_pred             EEEEcC--ChhHhHHHHHHccCCEEeeeEeccC----CC--ceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEE
Confidence            345555  9999999999999999876642221    10  112233322    234555543321100 0112223359


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      ++|.|+|   ++++++++.++|+++..++..  +   +.+.++|+||+||+|+|+
T Consensus        77 i~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~---~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          77 IAFSVPSEASLDAWRERLRAAGVPVSGVVDH--F---GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCcccceEee--c---ceEEEEEECCCCCEEEeC
Confidence            9999984   688899999999998765433  4   668999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.53  E-value=5.9e-13  Score=106.84  Aligned_cols=120  Identities=19%  Similarity=0.253  Sum_probs=81.3

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--e--EEEEecCCCCCcccccCCccE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--S--TFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~--~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      -..++.+.++|++++++||+++||+++..+...+.    .   ......+..++  .  .|.+.......  ....+.++
T Consensus        24 ~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~----~---~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~~~g~   94 (286)
T PLN02300         24 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE----E---KYTNAFLGYGPEDSNFVVELTYNYGVD--KYDIGTGF   94 (286)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC----C---cEEEEEEccCCCCCceEEEEeccCCCC--ccccCCCc
Confidence            34455555559999999999999999876543221    1   11122233321  2  23332211110  11223344


Q ss_pred             -EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          102 -VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 -~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                       |++|.|+|++++++++.+.|+++..+|...++   | .+++||+||+||.|+|++..
T Consensus        95 ~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~---g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         95 GHFGIAVEDVAKTVELVKAKGGKVTREPGPVKG---GKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             cEEEEEeCCHHHHHHHHHHCCCeeecCCcccCC---CceEEEEEECCCCCEEEEEeCC
Confidence             99999999999999999999999988877766   5 47889999999999999864

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.52  E-value=6.1e-13  Score=93.20  Aligned_cols=105  Identities=20%  Similarity=0.106  Sum_probs=72.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEe
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      ..|.++  |++++.+||+++||+++....  +     +      ...+..++..+.+.- .+..   ...+...|++|.+
T Consensus         5 v~l~v~--d~~~~~~FY~~vLG~~~~~~~--~-----~------~~~~~~~~~~~~l~~-~~~~---~~~~~~~hi~f~v   65 (121)
T cd07244           5 ITLAVS--DLERSVAFYVDLLGFKLHVRW--D-----K------GAYLEAGDLWLCLSV-DANV---GPAKDYTHYAFSV   65 (121)
T ss_pred             EEEEEC--CHHHHHHHHHHhcCCEEEEec--C-----C------ceEEecCCEEEEEec-CCCC---CCCCCeeeEEEEe
Confidence            344455  999999999999999886542  1     1      123344565555422 1110   1223445888888


Q ss_pred             --CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          108 --EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       108 --~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                        +|++++++++.++|+.+..++..  .   + +.+||+||+||.|+|++..
T Consensus        66 ~~~dl~~~~~~l~~~G~~~~~~~~~--~---~-~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          66 SEEDFASLKEKLRQAGVKEWKENTS--E---G-DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             CHHHHHHHHHHHHHcCCcccCCCCC--C---c-cEEEEECCCCCEEEEEeCC
Confidence              57999999999999998765543  2   4 6899999999999999754

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.52  E-value=7.1e-13  Score=92.60  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=77.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc-----cccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA-----AQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~-----~~~~~~~~~  102 (165)
                      ..|.++  |++++.+||+++||++.......+.   .+   ...+..+..++..|.+........+     ........|
T Consensus         4 v~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~---~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h   75 (128)
T cd07249           4 IGIAVP--DLEAAIKFYRDVLGVGPWEEEEVPP---EQ---GVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHH   75 (128)
T ss_pred             EEEEeC--CHHHHHHHHHHhhCCCCccccccCc---cc---ccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEE
Confidence            345555  9999999999999999865532110   01   1224455557766666543221111     112233458


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcc-cccccCCceEEEEEcCC--CCeEEEEe
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAE-GNGACCGERVGKVKDPY--GFTWLICS  155 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~-~~~~~~G~~~~~~~DP~--G~~~~l~~  155 (165)
                      ++|.|+|++++++++.++|++++.+|.. ..+   |.+.+++.||+  |+.|+|++
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~---g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          76 IAFEVDDIDAALARLKAQGVRLLQEGPRIGAG---GKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEEeCCHHHHHHHHHHCCCeeeccCCCccCC---CCEEEEEecCCCceEEEEecC
Confidence            9999999999999999999999998873 434   54455555555  99999974

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.51  E-value=1.3e-12  Score=94.78  Aligned_cols=110  Identities=11%  Similarity=0.017  Sum_probs=71.2

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      |+.+.+.|++++++||+++|||++..+...+    ++.  ......+..++.  .+.+..        ...+.-.|++|.
T Consensus         9 Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~----~~~--~~~~~~l~~~~~~h~~~~~~--------~~~~~~~Hiaf~   74 (143)
T cd07243           9 HCLLTGEDIAETTRFFTDVLDFYLAERVVDP----DGG--TRVGSFLSCSNKPHDIAFVG--------GPDGKLHHFSFF   74 (143)
T ss_pred             EEEEecCCHHHHHHHHHHhcCCEEEEEEecC----CCC--eEEEEEEecCCCcceEEEec--------CCCCCceEEEEE
Confidence            4555555999999999999999986554222    111  001111222221  111111        112233499999


Q ss_pred             eCCHHH---HHHHHHHCCCeEEecCcccc-cccCCceEEEEEcCCCCeEEEEe
Q 031118          107 TEDVEA---AVAKAVSAGAVAEGELAEGN-GACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       107 V~dv~~---~~~~~~~~G~~i~~~p~~~~-~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |+|+++   +++++.++|..+...|.... +   +.+.+||+||+||+|||..
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~---~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGIT---RGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCC---CceEEEEECCCCCEEEEec
Confidence            999888   46889999999887776543 3   4588999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.51  E-value=1.5e-12  Score=90.29  Aligned_cols=105  Identities=19%  Similarity=0.196  Sum_probs=72.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-e-EEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-S-TFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~-~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .++.+.++|+++|.+||++ ||+++..+.  +     +      ...+..++ . .+.+....       ..+...|++|
T Consensus         5 ~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~af   63 (113)
T cd07267           5 AHVRFEHPDLDKAERFLTD-FGLEVAART--D-----D------ELYYRGYGTDPFVYVARKG-------EKARFVGAAF   63 (113)
T ss_pred             EEEEEccCCHHHHHHHHHH-cCCEEEEec--C-----C------eEEEecCCCccEEEEcccC-------CcCcccEEEE
Confidence            3455555599999999999 999876441  1     1      22233332 2 22221111       1123448999


Q ss_pred             EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+|.++..+.+.+.|+.+..++. .++   +.+.++|+||+||.|+|....
T Consensus        64 ~v~~~~~~~~~~~~~g~~~~~~~~-~~~---~~~~~~~~DPdG~~iEl~~~~  111 (113)
T cd07267          64 EAASRADLEKAAALPGASVIDDLE-APG---GGKRVTLTDPDGFPVELVYGQ  111 (113)
T ss_pred             EECCHHHHHHHHHcCCCeeecCCC-CCC---CceEEEEECCCCCEEEEEecc
Confidence            999999998888888988776543 566   778999999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.51  E-value=1.4e-13  Score=95.70  Aligned_cols=117  Identities=17%  Similarity=0.106  Sum_probs=74.9

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CCCccccc---CCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GDSAAAQT---VGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~~~~~~~---~~~~~~i~  104 (165)
                      ++.+.+.|++++++||+++||+++........     .........+..++..+.+.... +.......   .....+++
T Consensus         4 Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    4 HIAIRVKDLEKAIDFYTDVLGFRLVEESDNDG-----EGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEESCHHHHHHHHHHTTTSEEEEEEEEES-----TTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCcEEeeecccc-----ccccccceeecccccceeeeeeccccccccccccccccceeEE
Confidence            34444449999999999999999987754110     01123455555555444332221 11110010   01334666


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceE-EEEEcCCCCeEEE
Q 031118          105 LETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERV-GKVKDPYGFTWLI  153 (165)
Q Consensus       105 ~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~-~~~~DP~G~~~~l  153 (165)
                      +.+.   |++++++++.+.|.++..+|....+   +... +|++||+||.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~---~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYF---GSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHST---TCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCC---CCEEEEEEECCCCCEEEC
Confidence            6665   5667799999999999999888777   6555 4799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.51  E-value=2.4e-12  Score=91.38  Aligned_cols=115  Identities=10%  Similarity=0.070  Sum_probs=74.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC---CeEEEEecCCCCCcccccCCccEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA---GSTFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g---~~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ++.+.+.|++++++||+++||+++.....       .    ..+..+..+   +..|.+........ ....+...|++|
T Consensus         4 hv~l~v~D~~~s~~FY~~~lG~~~~~~~~-------~----~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f   71 (134)
T cd08348           4 HVVLYVRDLEAMVRFYRDVLGFTVTDRGP-------L----GGLVFLSRDPDEHHQIALITGRPAAP-PPGPAGLNHIAF   71 (134)
T ss_pred             EEEEEecCHHHHHHHHHHhcCCEEEeecc-------C----CcEEEEEecCCCceEEEEEecCCCCC-CCCCCCceEEEE
Confidence            34444449999999999999998865421       0    013333333   23454433321100 012233458999


Q ss_pred             EeCCHH---HHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeeccc
Q 031118          106 ETEDVE---AAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKC  160 (165)
Q Consensus       106 ~V~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~  160 (165)
                      .|+|.+   ++++++++.|+++..++.. .    +.+.++++||+||+|+|++...+.
T Consensus        72 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~-~----~~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          72 EVDSLDDLRDLYERLRAAGITPVWPVDH-G----NAWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             EeCCHHHHHHHHHHHHHCCCCccccCCC-C----ceeEEEEECCCCCEEEEEEcCCCC
Confidence            999866   4689999999998866532 2    348899999999999999876543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.51  E-value=1.6e-12  Score=91.72  Aligned_cols=108  Identities=14%  Similarity=0.106  Sum_probs=74.1

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +.++.+.++|+++|.+||+++||+++..+.  +     .      ...+..++  ..|.+....         +...+++
T Consensus         7 l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~--~-----~------~~~l~~~~~~~~i~l~~~~---------~~~~~ia   64 (124)
T cd08361           7 IAYVRLGTRDLAGATRFATDILGLQVAERT--A-----K------ATYFRSDARDHTLVYIEGD---------PAEQASG   64 (124)
T ss_pred             eeEEEEeeCCHHHHHHHHHhccCceeccCC--C-----C------eEEEEcCCccEEEEEEeCC---------CceEEEE
Confidence            345555555999999999999999875431  1     1      12233332  234443211         2335799


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcc---cccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAE---GNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~---~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      |.|+|   ++++++++.++|+++...+..   ..+   +.++++|+||+||.|+|......
T Consensus        65 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~---~~~~~~f~DPdG~~iE~~~~~~~  122 (124)
T cd08361          65 FELRDDDALESAATELEQYGHEVRRGTAEECELRK---VKAFIAFRDPSGNSIELVVRPSH  122 (124)
T ss_pred             EEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCC---cceEEEEECcCCCEEEEEEeeec
Confidence            99986   888899999999998765542   233   55788999999999999876543

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.50  E-value=1.2e-12  Score=96.58  Aligned_cols=111  Identities=16%  Similarity=0.159  Sum_probs=73.4

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC---CeEEEEecCCCCCcccccCCccEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA---GSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g---~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ..|.|+  |++++.+||+++||+++..+..       +     ....+..+   +..|.+.............+...||+
T Consensus         5 I~i~V~--Dle~s~~FY~~~LG~~~~~~~~-------~-----~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hia   70 (157)
T cd08347           5 VTLTVR--DPEATAAFLTDVLGFREVGEEG-------D-----RVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVA   70 (157)
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEEeeeC-------C-----EEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEE
Confidence            345555  9999999999999999875531       1     01112222   44565544321100011223344999


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|   ++++++++.+.|..+. ++....+    .+.+||+||+||.|+|++..
T Consensus        71 f~v~d~~dvd~~~~~L~~~Gv~~~-~~~~~~~----~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          71 FRVPDDEELEAWKERLEALGLPVS-GIVDRFY----FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             EECCCHHHHHHHHHHHHHCCCCcc-ccccccc----EEEEEEECCCCcEEEEEECC
Confidence            99998   8889999999999754 4444433    37899999999999999854

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.50  E-value=1.2e-12  Score=91.59  Aligned_cols=108  Identities=18%  Similarity=0.073  Sum_probs=72.0

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      .+.|.|+  |+++|++||+++||+++..+.  +    .+      ...+..++  ..|.+....        .....|++
T Consensus         5 ~v~l~v~--Dl~~s~~FY~~~LG~~~~~~~--~----~~------~~~~~~~~~~~~~~l~~~~--------~~~~~~~~   62 (120)
T cd07252           5 YLGVESS--DLDAWRRFATDVLGLQVGDRP--E----DG------ALYLRMDDRAWRIAVHPGE--------ADDLAYAG   62 (120)
T ss_pred             EEEEEeC--CHHHHHHHHHhccCceeccCC--C----CC------eEEEEccCCceEEEEEeCC--------CCceeEEE
Confidence            3445555  999999999999999875431  1    11      22233333  234443221        12334789


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCccc--ccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEG--NGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~--~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.+++   +++.++++.++|+.+...|...  .+  ++.+.++|+||+||.|+|....+
T Consensus        63 f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~~~~~~~DPdG~~iE~~~~~~  119 (120)
T cd07252          63 WEVADEAALDALAARLRAAGVAVEEGSAELAAER--GVEGLIRFADPDGNRHELFWGPK  119 (120)
T ss_pred             EEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhC--CCcEEEEEECCCCCEEEEEeccc
Confidence            99975   7788999999999998765321  12  03489999999999999987543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.49  E-value=2e-12  Score=89.42  Aligned_cols=104  Identities=15%  Similarity=0.100  Sum_probs=69.4

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      .++.+.+.|++++.+||+ +||+++....  +            ...+.. ++.  .+.+....      ......+++.
T Consensus         4 ~hv~l~v~d~~~s~~FY~-~lG~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~   62 (112)
T cd08344           4 DHFALEVPDLEVARRFYE-AFGLDVREEG--D------------GLELRTAGNDHRWARLLEGA------RKRLAYLSFG   62 (112)
T ss_pred             eEEEEecCCHHHHHHHHH-HhCCcEEeec--C------------ceEEEecCCCceEEEeecCC------CCceeeEEEE
Confidence            345555559999999997 6999886431  1            111211 212  22232211      1122345667


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +.++|++++++++.++|+++..++  .++   +.+.+||+||+||+|+|....
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~--~~~---~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAP--PGA---DPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCC--CcC---CCCEEEEECCCCCEEEEecCC
Confidence            778999999999999999988765  344   557899999999999998644

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.48  E-value=4.5e-13  Score=93.57  Aligned_cols=116  Identities=17%  Similarity=0.172  Sum_probs=83.6

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC--CCC--cc--cccC
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS--GDS--AA--AQTV   97 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~--~~~--~~--~~~~   97 (165)
                      +.+...|.|+  |++++.+||+ .|||+......+     +.     .-+.+..+++.+||....  ..+  ++  +...
T Consensus         3 ~mIFvNLPVk--DL~~S~~Fy~-alGfk~Npq~sd-----e~-----a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~   69 (133)
T COG3607           3 QMIFVNLPVK--DLEASKAFYT-ALGFKFNPQFSD-----ED-----AACMIISDNIFVMLLEEARFQTFTKRQIADTTK   69 (133)
T ss_pred             eEEEEecchh--hHHHHHHHHH-HhCcccCCCccc-----cc-----ceeEEEeccEEEEEeccHHhhhhcccccccccC
Confidence            3456666666  9999999999 599988654321     11     134445566777775542  111  11  4667


Q ss_pred             CccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           98 GTGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        98 ~~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++.+.++|.+.+   +++...+++++||++..++.+..    ..+-..|+|||||+|++.+-
T Consensus        70 s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~g----fMYg~~fqDpDGh~wE~l~m  127 (133)
T COG3607          70 SREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEG----FMYGRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             CceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccc----cccceeeeCCCCCeEEEEEe
Confidence            788999999986   66679999999999988888763    34667999999999999864

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.47  E-value=5.8e-12  Score=89.95  Aligned_cols=109  Identities=16%  Similarity=0.156  Sum_probs=73.2

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.+.+.|+++|.+||+++||+++.....       .   .  ...+..++    ..|.+....      .....-.||+
T Consensus         6 hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-------~---~--~~~~~~~~~~~~~~i~l~~~~------~~~~g~~hia   67 (134)
T cd08360           6 HVVLFVPDVEAAEAFYRDRLGFRVSDRFK-------G---R--GAFLRAAGGGDHHNLFLIKTP------APMAGFHHAA   67 (134)
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEec-------C---c--EEEEECCCCCCCcEEEEecCC------CCCCcceEEE
Confidence            44444559999999999999998864421       1   0  22233321    244443321      1123344999


Q ss_pred             EEeCCHHHHH---HHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVEAAV---AKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~~~---~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|+++..   +++.++|.++..+|...++  .+.+.+||+||+||+|+|....
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRI--GSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCC--CccEEEEEECCCCCEEEEEccc
Confidence            9999988875   5999999998877765554  0346789999999999999643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.46  E-value=1.6e-12  Score=95.26  Aligned_cols=117  Identities=15%  Similarity=0.069  Sum_probs=74.2

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      |+.+.++|+++|++||+++||+++......+.   .+   ......+..++.  .+.......   .....+.-.||+|.
T Consensus         4 Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~---~~---~~~~~~l~~~~~~~~~~~~~~~l---~~~~~~g~~Hiaf~   74 (153)
T cd07257           4 HVVLEVPDFAASFDWYTETFGLKPSDVIYLPG---PG---NPVAAFLRLDRGEEYVDHHTLAL---AQGPESGVHHAAFE   74 (153)
T ss_pred             EEEEecCCHHHHHHHHHHhcCCeEEeeEecCC---CC---CcEEEEEecCCCCCcccchHHHH---hcCCCCceeEEEEE
Confidence            34444449999999999999999865432220   01   112233333221  110000000   01112334589999


Q ss_pred             eCCHHHHH---HHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          107 TEDVEAAV---AKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~dv~~~~---~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|++++.   ++++++|.++...|.....   | ..++|++||+||.|||....
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~---g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHIL---GSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCC---CCCEEEEEECCCCCEEEEEcCc
Confidence            99999985   8999999999877776654   4 46679999999999998654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PLN02300 lactoylglutathione lyase

Probab=99.46  E-value=5.3e-12  Score=101.35  Aligned_cols=120  Identities=17%  Similarity=0.233  Sum_probs=81.4

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCc-c
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGT-G  100 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~-~  100 (165)
                      .+..|.++  |++++.+||+++||+++......|+    ..   .....+..++    ..+.+....+..  ....++ .
T Consensus       156 ~~~~l~~~--d~~~a~~Fy~~~lg~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~lel~~~~~~~--~~~~g~~~  224 (286)
T PLN02300        156 CQVMLRVG--DLDRSIKFYEKAFGMKLLRKRDNPE----YK---YTIAMMGYGPEDKTTVLELTYNYGVT--EYTKGNAY  224 (286)
T ss_pred             eeEEEEeC--CHHHHHHHHHhccCCEEEeeecccc----cc---eEEEEEecCCCCCccEEEEeecCCCC--ccccCCce
Confidence            34555555  9999999999999999875433231    10   1112222211    234333222111  112234 4


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          101 CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +|++|.|+|++++++++.++|++++.+|...++.  +.+.++|+||+|+.|+|.+...
T Consensus       225 ~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~--~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        225 AQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGI--NTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             eEEEEecCCHHHHHHHHHHcCCeEecCCccCCCC--ceEEEEEECCCCCEEEEEccch
Confidence            5899999999999999999999999999888761  3478999999999999998764

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=8.9e-12  Score=88.97  Aligned_cols=113  Identities=14%  Similarity=0.145  Sum_probs=70.6

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc-------cccCCCCceEEEEEEE----CCeEEEEecCCCCCcc
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR-------KAEQELPLISCAQLEI----AGSTFLVSDVSGDSAA   93 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~-------~~~g~~~~v~~~~l~~----g~~~l~l~d~~~~~~~   93 (165)
                      .+++.|.|+  |+++|++||+++|||++..+.+.|+.       ..++   ......+..    ++..|.|...... . 
T Consensus         3 ~~Hv~irV~--DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~l~~~~~~~~~~lEL~~n~~~-~-   75 (127)
T cd08358           3 ALHFVFKVG--NRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDG---KWSKTMIGYGPEDDHFVVELTYNYGI-G-   75 (127)
T ss_pred             eEEEEEEeC--CHHHHHHHHHHhcCCEEEeeecCccccccccccCCCC---cEEEEEEecCCCCCccEEEeEecCCC-C-
Confidence            356666676  99999999999999998776544420       0001   111122322    2234555433221 1 


Q ss_pred             cccCCccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           94 AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        94 ~~~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +...+.+ +++|.|++. ++.+++.+.|..+...|        + .+++++||||+.|+|+.
T Consensus        76 ~~~~g~~-~~hlav~~~-d~~~~l~~~Gv~~~~~~--------~-~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          76 DYELGND-FLGITIHSK-QAVSNAKKHNWPVTEVE--------D-GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCCCC-EEEEEEECH-HHHHHHHHCCCceecCC--------C-CEEEEECCCCCEEEEec
Confidence            1223333 677777776 55699999999877543        2 28899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.45  E-value=4.7e-12  Score=88.21  Aligned_cols=108  Identities=18%  Similarity=0.180  Sum_probs=72.0

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-C-C--eEEEEecCCCCCcccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-A-G--STFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g-~--~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +.++.+.++|++++++||+++||+++....  +     +      ++.+.. + .  ..+.+...        ..+...|
T Consensus         5 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~h   63 (121)
T cd07266           5 LGHVELRVTDLEKSREFYVDVLGLVETEED--D-----D------RIYLRGLEEFIHHSLVLTKA--------PVAGLGH   63 (121)
T ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeccC--C-----C------eEEEEecCCCceEEEEEeeC--------CCCceeE
Confidence            345555555999999999999999976431  1     1      222221 1 1  23333221        1234558


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|.   |++++++++.++|.++...|....+  ++.+.++++||+||+|+|++..
T Consensus        64 i~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          64 IAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEP--GQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             EEEECCCHHHHHHHHHHHHHcCCCcccccCCcCC--CCccEEEEECCCCCEEEEEecc
Confidence            899884   6888899999999998776444333  0458999999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.45  E-value=6e-12  Score=91.42  Aligned_cols=107  Identities=13%  Similarity=0.164  Sum_probs=72.3

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.++|++++++||+++||+++....  .     .   .  ...+..++  ..+.+...        ..+...|++|.
T Consensus         7 Hv~i~V~Dle~s~~FY~~~LG~~~~~~~--~-----~---~--~~~l~~~~~~~~~~l~~~--------~~~~~~hiaf~   66 (144)
T cd07239           7 HVVLNSPDVDKTVAFYEDVLGFRVSDWL--G-----D---Q--MAFLRCNSDHHSIAIARG--------PHPSLNHVAFE   66 (144)
T ss_pred             EEEEECCCHHHHHHHHHhcCCCEEEEee--C-----C---e--EEEEECCCCcceEEEccC--------CCCceEEEEEE
Confidence            4444445999999999999999886432  1     0   0  22233332  22333211        12334589999


Q ss_pred             eCCHHHHH---HHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TEDVEAAV---AKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~dv~~~~---~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|++++.   +++.++|..+..+|.....  .+.+++||+||+||.|+|++..
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~--~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGP--GDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCC--CCCEEEEEECCCCcEEEeccCc
Confidence            99988874   8999999998877654332  0457789999999999999865

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.44  E-value=1e-11  Score=92.23  Aligned_cols=114  Identities=13%  Similarity=0.018  Sum_probs=74.0

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ...|.|+  |++++++||+++||+++......+.    +   ......+..++.  .+.+... +    ....+...||+
T Consensus         9 Hi~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~i~l~~~-~----~~~~~~~~hia   74 (166)
T cd09014           9 HVNLLAS--DVDANRDFMEEVLGFRLREQIRLDN----G---KEAGAWMSVSNKVHDVAYTRD-P----AGARGRLHHLA   74 (166)
T ss_pred             eEEEEcC--CHHHHHHHHHHccCCEEEEEEecCC----C---ceEEEEEeCCCCceeEEEecC-C----CCCCCCceEEE
Confidence            4445555  9999999999999999865532111    1   111222333222  2333211 1    11122345899


Q ss_pred             EEeCCHH---HHHHHHHHCCCeEEecCcccccccCCc-eEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVE---AAVAKAVSAGAVAEGELAEGNGACCGE-RVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G~-~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|.+   ++++++.++|++++.+|....+   +. +.+|++||+||+|||....
T Consensus        75 f~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~---~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          75 YALDTREDVLRAADIFLENGIFIEAGPGKHGI---QQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             EECCCHHHHHHHHHHHHHcCCccccCCcccCC---CCceEEEEECCCCCEEEEEEcC
Confidence            9998655   6789999999998877766554   33 4689999999999998874

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.43  E-value=7.4e-12  Score=90.72  Aligned_cols=112  Identities=10%  Similarity=-0.067  Sum_probs=74.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe-EEEEecCCCCCcccccCCccEEEEEEe
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS-TFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~-~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      .|.|+  |++++++||+++||+++..+..       .   .  .+.+...+. ........+     ...+.--||+|.|
T Consensus         4 ~l~V~--Dle~s~~Fy~~vLG~~~~~~~~-------~---~--~~~l~~~~~~~~h~~~~~~-----~~~~gl~Hiaf~v   64 (141)
T cd07258           4 VIGSE--NFEASRDSLVEDFGFRVSDLIE-------D---R--IVFMRCHPNPFHHTFAVGP-----ASSSHFHHVNFMV   64 (141)
T ss_pred             EEecC--CHHHHHHHHHhcCCCEeeeeeC-------C---E--EEEEEcCCCCCcceeeecc-----CCCCceEEEEEEC
Confidence            34455  9999999999999999765421       1   1  223332221 111001111     1223445999999


Q ss_pred             CCHH---HHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecccC
Q 031118          108 EDVE---AAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCA  161 (165)
Q Consensus       108 ~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~~  161 (165)
                      +|.+   ++++++.++|.++..+|...+.  .+.+.+||+||+|+.|+|+......+
T Consensus        65 ~~~~~v~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          65 TDIDDIGKALYRIKAHDVKVVFGPGRHPP--SDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEeCCceECC--CCCEEEEEECCCCCEEEEEeCcceec
Confidence            8754   5689999999999888877553  05588999999999999988765544

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.42  E-value=2.1e-11  Score=89.41  Aligned_cols=117  Identities=15%  Similarity=0.057  Sum_probs=75.6

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      -+..|.|+  |++++++||+++||+++......+-  .++.  ....+.+..++  ..|.+...       ...+...||
T Consensus        11 ~Hi~l~v~--Dl~~a~~FY~~~LGl~~~~~~~~~~--~~~~--~~~~~~l~~~~~~~~i~~~~~-------~~~~g~~Hi   77 (154)
T cd07237          11 GHVVLATP--DPDEAHAFYRDVLGFRLSDEIDIPL--PPGP--TARVTFLHCNGRHHSLALAEG-------PGPKRIHHL   77 (154)
T ss_pred             CEEEEEeC--CHHHHHHHHHHccCCEEEEEEcccC--CCCC--cceEEEEEeCCCCCCEEEEcC-------CCCceeEEE
Confidence            34455565  9999999999999999865432110  0010  11233334333  12222111       111233489


Q ss_pred             EEEeCCHH---HHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          104 CLETEDVE---AAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +|.|+|++   ++++++.++|.++..++...++  .+.+.+|++||+|+.|||....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~--~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTN--DRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCC--CCcEEEEEECCCCcEEEeccCc
Confidence            99998866   4699999999999887766553  1458899999999999998654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.41  E-value=1.7e-11  Score=85.64  Aligned_cols=104  Identities=17%  Similarity=0.238  Sum_probs=68.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.+.++|+++|.+||+++||+++..+.  +     .      ...+...+    ..+.+...        ......|++
T Consensus         9 hv~l~v~dl~~a~~FY~~~lG~~~~~~~--~-----~------~~~l~~~~~~~~~~~~l~~~--------~~~~~~h~a   67 (121)
T cd09013           9 HVELLTPKPEESLWFFTDVLGLEETGRE--G-----Q------SVYLRAWGDYEHHSLKLTES--------PEAGLGHIA   67 (121)
T ss_pred             EEEEEeCCHHHHHHHHHhCcCCEEEeec--C-----C------eEEEEeccCCCccEEEEeeC--------CCCceEEEE
Confidence            4455555999999999999999886542  1     1      22222211    22333211        112334899


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|   ++++++++.++|.++...+....+   | +.++|+||+||.|+|....
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~---~-~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGH---G-KAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCC---c-ceEEEECCCCCEEEEEEec
Confidence            99974   777799999999887543333333   4 6789999999999998753

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.41  E-value=2.3e-11  Score=87.03  Aligned_cols=119  Identities=19%  Similarity=0.330  Sum_probs=91.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEe-ecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRS-VETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~-~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |++++++|.+.+ ++++|..||.++|--..+... ..|+....+..+.+.+++++++|..++..|..+..  ....+..+
T Consensus         3 ~~kit~~L~F~~-~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~--~f~fneA~   79 (151)
T COG3865           3 MPKITPFLWFDG-NAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNT--SFKFNEAF   79 (151)
T ss_pred             CCcceeEEEECC-cHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCc--CCCcCccE
Confidence            678999999996 999999999999988664432 23432223435689999999999988888876642  25678899


Q ss_pred             EEEEEeCCHHHH---HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETEDVEAA---VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~dv~~~---~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++.+.|+|.+|.   +.++.+.|+.             -..++|++|.+|..|+|.-+.
T Consensus        80 S~~v~~~~q~E~Drlwnal~~~g~e-------------~~~cgW~kDKfGVSWQi~p~~  125 (151)
T COG3865          80 SFQVACDDQEEIDRLWNALSDNGGE-------------AEACGWLKDKFGVSWQIVPRV  125 (151)
T ss_pred             EEEEEcCCHHHHHHHHHHHhccCcc-------------hhcceeEecccCcEEEEcHHH
Confidence            999999986665   5666677761             347899999999999998654

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.36  E-value=6.3e-11  Score=87.47  Aligned_cols=110  Identities=12%  Similarity=0.109  Sum_probs=67.0

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      |+.+.++|+++|++||+++||+++......+    .+   ......+..++  ..+.+..        .......|++|.
T Consensus         6 Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~----~~---~~~~~~l~~~~~~~~i~l~~--------~~~~~~~Hiaf~   70 (161)
T cd07256           6 HFNLRVPDVDAGLAYYRDELGFRVSEYTEDD----DG---TTWAAWLHRKGGVHDTALTG--------GNGPRLHHVAFW   70 (161)
T ss_pred             EEEEecCCHHHHHHHHHhccCCEEEEEeccC----CC---cEEEEEEecCCCcceEEEec--------CCCCceeEEEEE
Confidence            4444444999999999999999886443211    11   11111122221  1122211        111233489999


Q ss_pred             eCC---HHHHHHHHHHCCCeE--EecCcccc-cccCCceEEEEEcCCCCeEEEEee
Q 031118          107 TED---VEAAVAKAVSAGAVA--EGELAEGN-GACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       107 V~d---v~~~~~~~~~~G~~i--~~~p~~~~-~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |+|   ++++++++.++|+.+  ..+|.... +   +.+.+||+||+||+|||...
T Consensus        71 v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~---~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          71 VPEPHNIIRTCDLLAAAGYSDRIERGPGRHGIS---NAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             cCCHHHHHHHHHHHHHcCCCcccccCCCccCCC---CceEEEEECCCCCeEEEeec
Confidence            986   666788999999863  33444332 2   45789999999999999853

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.32  E-value=9.3e-11  Score=94.45  Aligned_cols=113  Identities=11%  Similarity=0.016  Sum_probs=71.7

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +-+|.+.++|++++++||+++||+++......+.    +.  ......+..++.  .+.+..       ....+.-.||+
T Consensus       146 i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~Hia  212 (303)
T TIGR03211       146 LDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGD----GK--EQAAAWLSVSNKAHDIAFVG-------DPEPGKLHHVS  212 (303)
T ss_pred             EEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCC----Cc--EEEEEEEEcCCCCcccceec-------CCCCCceEEEE
Confidence            4565566669999999999999999865532221    11  001111222211  111110       01112244999


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          105 LETEDVEA---AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       105 ~~V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      |.|+|.++   +++++.++|+++..+|.....  .+.+.+||+||+||+|||+
T Consensus       213 f~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       213 FFLDSWEDVLKAADVMSKNDVSIDIGPTRHGI--TRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCceeeCCcccCC--CCceEEEEECCCCCEEEEe
Confidence            99997544   678999999999888765542  0247899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.23  E-value=6.5e-10  Score=88.98  Aligned_cols=114  Identities=13%  Similarity=0.094  Sum_probs=71.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.++|++++++||+++|||++......+.  .++.  .+....+..++.  .+.+...       ...+.-.|++|.
T Consensus       145 Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~--~~g~--~~~~~~l~~~~~~~~~~l~~~-------~~~~~~~Hiaf~  213 (286)
T TIGR03213       145 HIVLRVPDVDAALAFYTEVLGFQLSDVIDLPA--GPGV--TVRPYFLHCNERHHSLAFAAG-------PSEKRLNHLMLE  213 (286)
T ss_pred             EEEEEcCCHHHHHHHHHHccCCeEEEeEcccC--CCCC--cceEEEEEECCCcceEEEecC-------CCCCceEEEEEE
Confidence            44444559999999999999999865432211  0110  011223333321  2222211       112233489999


Q ss_pred             eCCHHH---HHHHHHHCCCeEEecCcccc-cccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TEDVEA---AVAKAVSAGAVAEGELAEGN-GACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~dv~~---~~~~~~~~G~~i~~~p~~~~-~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|.++   +++++.++|. +...|.... +   +.+++|++||+|++|||....
T Consensus       214 v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~---~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       214 VDTLDDVGLALDRVDADGI-VASTLGRHTND---HMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             cCCHHHHHHHHHHHHHCCC-EEecCCcCCCC---CeEEEEEECCCCcEEEeecCc
Confidence            998777   6899999999 555554433 4   568899999999999998643

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.23  E-value=2.7e-10  Score=91.19  Aligned_cols=106  Identities=16%  Similarity=0.098  Sum_probs=70.7

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.++|+++|++||+++||+++....  +    .+    ..+  +..+  +..+.+....        .....+++|.
T Consensus         6 ~v~l~V~Dl~~s~~FY~~~LGl~~~~~~--~----~~----~~~--~~~~~~~~~~~l~~~~--------~~~~~~~~f~   65 (286)
T TIGR03213         6 YLGIGVSDVDAWREFATEVLGMMVASEG--E----ND----ALY--LRLDSRAHRIAVHPGE--------SDDLAYAGWE   65 (286)
T ss_pred             EEEEEeCCHHHHHHHHHhccCcccccCC--C----Cc----eEE--EEcCCCceEEEEEECC--------cCCeeeEeee
Confidence            3444444999999999999999875331  1    11    112  2333  2234443221        1123479999


Q ss_pred             eCC---HHHHHHHHHHCCCeEEecCcc---cccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TED---VEAAVAKAVSAGAVAEGELAE---GNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~d---v~~~~~~~~~~G~~i~~~p~~---~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|   ++++.+++.++|+++...|..   ..+   +.+.++|+||+||.|+|....
T Consensus        66 V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~---~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        66 VADEAGLDQVKEKLEKAGVAVTVASAAEARERG---VLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             eCCHHHHHHHHHHHHHcCCceEECCHHHhhhcc---ceEEEEEECCCCCEEEEEEcc
Confidence            998   777899999999998876532   233   458899999999999998643

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.19  E-value=9.8e-10  Score=88.50  Aligned_cols=108  Identities=18%  Similarity=0.186  Sum_probs=70.4

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEE-ECCeEEEEecCCCCCcccccCCccEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLE-IAGSTFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~-~g~~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .+.|.|+  |++++++||+++||+++..+.  +     .   .+.+.... .+...+.+...        ......|++|
T Consensus         7 Hi~l~V~--Dle~s~~FY~~~LG~~~~~~~--~-----~---~~~~~~~~~~~~~~~~l~~~--------~~~g~~hiaf   66 (303)
T TIGR03211         7 HVELRVL--DLEESLKHYTDVLGLEETGRD--G-----Q---RVYLKAWDEWDHYSVILTEA--------DTAGLDHMAF   66 (303)
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCEEeeec--C-----c---eEEEEeccccccceEeeccC--------CCCceeEEEE
Confidence            4445555  999999999999999886542  1     1   11111100 11223333211        1122348999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEEecCccc-ccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETE---DVEAAVAKAVSAGAVAEGELAEG-NGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~---dv~~~~~~~~~~G~~i~~~p~~~-~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+   |++++++++++.|+++...|... +.   ..+.++|+||+||.|+|++..
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~---~g~~~~~~DPdG~~iEl~~~~  119 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPG---VGRRVRFTLPSGHTMELYAEK  119 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCC---cceEEEEECCCCCEEEEEEcc
Confidence            998   68888999999999988766522 22   237899999999999999854

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.19  E-value=1.1e-09  Score=87.67  Aligned_cols=103  Identities=15%  Similarity=0.197  Sum_probs=70.2

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-C---CeEEEEecCCCCCcccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-A---GSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g---~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      .+.|.|+  |++++++||+++||+++....  +     .      .+.+.. +   ...+.+...        ......|
T Consensus         7 hv~l~v~--Dl~~s~~FY~~vLGl~~~~~~--~-----~------~~~~~~~~~~~~~~l~l~~~--------~~~~~~h   63 (294)
T TIGR02295         7 HVELRVT--DLDKSREFYVDLLGFRETESD--K-----E------YIYLRGIEEFQHHSLVLTKA--------PSAALSY   63 (294)
T ss_pred             EEEEEeC--CHHHHHHHHHHccCCEEEEec--C-----C------eEEEeccCcCCceEEEeeeC--------CCcCccE
Confidence            3445555  999999999999999986542  1     1      222221 1   112333211        1123458


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+   |++++++++.++|+++...+.  ++   +.+.++|+||+||.|+|+...
T Consensus        64 iaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~---~~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        64 IGFRVSKEEDLDKAADFFQKLGHPVRLVRD--GG---QPEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             EEEEeCCHHHHHHHHHHHHhcCCcEEeecC--CC---CceEEEEECCCCCEEEEEEch
Confidence            999997   678889999999999887653  23   458999999999999999754

The enzyme from Bacillus brevis contains manganese.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.18  E-value=2.9e-10  Score=92.60  Aligned_cols=106  Identities=19%  Similarity=0.146  Sum_probs=75.0

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      .+...|.|+  |+++|.+||+++|++.. +.        ++.   . . .+ -+.+..|+....     +....+.+.++
T Consensus       248 ~IfVNLpV~--DL~rS~~FYt~LF~~n~-Fs--------de~---a-~-cm-~dtI~vMllt~~-----D~~~~~evLl~  305 (357)
T PRK01037        248 TFSVVLEVQ--DLRRAKKFYSKMFGLEC-WD--------GDK---L-F-LL-GKTSLYLQQTKA-----EKKNRGTTTLS  305 (357)
T ss_pred             eEEEEeeeC--CHHHHHHHHHHHhCCCC-CC--------CCc---c-c-cc-cCcEEEEEecCC-----CCCCcceEEEE
Confidence            355555555  99999999999999875 32        121   1 1 22 233455554433     24567788999


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.+++   +++..++++++||+...++++.     |- .-.|.|||||.|++++...
T Consensus       306 Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~-----Gf-~rsf~D~DGH~WEi~~~~~  356 (357)
T PRK01037        306 LELECEHDFVRFLRRWEMLGGELGEQADGH-----FP-LRLVFDLDGHIWVVSCVQK  356 (357)
T ss_pred             eccCCHHHHHHHHHHHHHcCCCCCCCcccc-----cC-cceeECCCCCEEEEEEEec
Confidence            99997   6667999999999877777766     43 5579999999999997653

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.12  E-value=2.5e-09  Score=85.62  Aligned_cols=113  Identities=18%  Similarity=0.134  Sum_probs=69.1

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      -++.+.++|+++|++||+++||+++......+    .+   ......+..++.  .+.+..        ...+...|++|
T Consensus       138 ~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~Hiaf  202 (294)
T TIGR02295       138 DHFNVFVPDVQRALRFYKEELGFRVTEYTEDD----EG---NLAAAWLHRKGGVHDIALTN--------GNGPRLHHIAY  202 (294)
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC----CC---cEEEEEEecCCCcCceEeec--------CCCCceeeEEE
Confidence            34444445999999999999999986543211    11   111111111111  121111        11123449999


Q ss_pred             EeCCHH---HHHHHHHHCCCe--EEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETEDVE---AAVAKAVSAGAV--AEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~dv~---~~~~~~~~~G~~--i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+|.+   +.+++++++|..  +...|.....  .+.+++|++||+||+|||++..
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~--~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGV--SNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCC--CcceEEEEECCCCCEEEEEecc
Confidence            999955   458899999987  5555654332  0236789999999999998744

The enzyme from Bacillus brevis contains manganese.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.09  E-value=1.1e-09  Score=79.69  Aligned_cols=123  Identities=18%  Similarity=0.222  Sum_probs=78.0

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccc----cC---------CCCceEEEEEEECCeEEEEecCCCC---
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKA----EQ---------ELPLISCAQLEIAGSTFLVSDVSGD---   90 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~----~g---------~~~~v~~~~l~~g~~~l~l~d~~~~---   90 (165)
                      .+.+.|.  |+.+++.||++++|+.+....+.++..+    .+         ..+... ....+....|.+...+..   
T Consensus        25 ~t~~rvk--d~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~~~ELthn~Gtes~  101 (170)
T KOG2944|consen   25 QTMLRVK--DPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNAKLELTHNWGTESP  101 (170)
T ss_pred             hceeecc--cchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccCceeeecCCCCCCC
Confidence            4455566  9999999999999998865433322100    00         011111 112223445555443321   


Q ss_pred             --Cc-c-cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           91 --SA-A-AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        91 --~~-~-~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                        +. . ....+.++ ||||+|+|+++++.++++.|++....|.+.--    ...+++.||||+.|+|...
T Consensus       102 ~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~----K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  102 PDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKM----KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             cchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccc----cceeEEECCCCCeEEEeec
Confidence              11 0 12334355 99999999999999999999997776655311    2688999999999999865

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.01  E-value=1.1e-08  Score=70.62  Aligned_cols=92  Identities=20%  Similarity=0.219  Sum_probs=63.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccE-EEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGC-VLC  104 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~-~i~  104 (165)
                      ..|.|+  |+++|++||+++||+........+.    .   .+....+..++  ..|.|........+....+.++ ||+
T Consensus         3 v~i~V~--Dl~~a~~~~~~~lG~~~~~~~~~~~----~---~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia   73 (109)
T PF13669_consen    3 VGIVVP--DLDAAAAFYCDVLGFEPWERYRDEP----Q---GVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIA   73 (109)
T ss_dssp             EEEEES---HHHHHHHHHHCTTHEEEEEEEEGC----T---TEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEE
T ss_pred             EEEEcC--CHHHHHHHHHHhhCCcEEEEEecCC----C---CEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEE
Confidence            345566  9999999999999998765543321    1   24456667776  3666544332211112355665 999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecC
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGEL  128 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p  128 (165)
                      |.|+|++++.+++.+.|.+++.++
T Consensus        74 ~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   74 FEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             EEESHHHHHHHHHHHTTECEEECE
T ss_pred             EEeCCHHHHHHHHHHCCCEEcccC
Confidence            999999999999999999988764

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.82  E-value=3.5e-07  Score=75.63  Aligned_cols=96  Identities=21%  Similarity=0.262  Sum_probs=67.5

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc----cccCCccE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA----AQTVGTGC  101 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~----~~~~~~~~  101 (165)
                      ..+.+.|+  |++++++||.+.|||+.......+    .+    ..+..++.|+..|++........+    ...++.++
T Consensus         4 ~hi~~~V~--D~~~a~~~y~~~LGf~~~~~~~~~----~~----~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv   73 (353)
T TIGR01263         4 DFVEFYVG--DAKQAAYYYFTRFGFEKVAKETGH----RE----KASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGV   73 (353)
T ss_pred             EEEEEEeC--CHHHHHHHHHHhcCCcEEEEeecC----Cc----eeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCce
Confidence            34556666  999999999999999987652111    11    123445667888887654322111    12345555


Q ss_pred             -EEEEEeCCHHHHHHHHHHCCCeEEecCccc
Q 031118          102 -VLCLETEDVEAAVAKAVSAGAVAEGELAEG  131 (165)
Q Consensus       102 -~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~  131 (165)
                       +++|.|+|++++++++.++|++++.+|...
T Consensus        74 ~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~  104 (353)
T TIGR01263        74 KDVAFRVDDAAAAFEAAVERGAEPVQAPVEL  104 (353)
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEeccCCccC
Confidence             899999999999999999999999887653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.82  E-value=1.7e-07  Score=73.79  Aligned_cols=111  Identities=14%  Similarity=0.123  Sum_probs=77.7

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc-ccccCCccEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA-AAQTVGTGCVLCL  105 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~-~~~~~~~~~~i~~  105 (165)
                      ...|.|+  |++++..||++++|+++..+.       ++      -..+..+++.|+.....++.+ ++......+|++|
T Consensus        13 ~v~L~vr--dL~~~~~FY~~ilGL~v~~~~-------~~------~v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514          13 AVTLNVR--DLDSMTSFYQEILGLQVLEET-------DG------SVTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             EEEEEec--cHHHHHHHHHHhhCCeeeecc-------Cc------eEEEeeCCEEEEEEEeCCCCCCCCccccceeeeee
Confidence            3455566  999999999999999987653       11      345667887666545444433 2345566789999


Q ss_pred             EeCCHHHH---HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETEDVEAA---VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~dv~~~---~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      -+.+...+   +.++...|..+. ...+...    .--.||.||+||-||+....
T Consensus        78 LlP~r~~L~~~l~hl~~~~~~l~-Ga~DH~v----SEAlYl~DPEGNGIEiYaDr  127 (265)
T COG2514          78 LLPTREDLARVLNHLAEEGIPLV-GASDHLV----SEALYLEDPEGNGIEIYADR  127 (265)
T ss_pred             ecCCHHHHHHHHHHHHhcCCccc-ccCcchh----heeeeecCCCCCeEEEEecC
Confidence            99975554   788888887766 3333322    25679999999999998753

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.80  E-value=1e-07  Score=66.00  Aligned_cols=117  Identities=14%  Similarity=0.041  Sum_probs=75.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-e-EEEEecCCCCCc--c---cccCCcc
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-S-TFLVSDVSGDSA--A---AQTVGTG  100 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~-~l~l~d~~~~~~--~---~~~~~~~  100 (165)
                      .+|.+.+.|++++.+||.++||++.....+       .      +..+..-| . .+.+.......+  .   ..-...+
T Consensus         6 FHLA~pV~Dl~~tr~FYgevlG~~~GRstd-------~------wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pH   72 (138)
T COG3565           6 FHLAIPVNDLDETRRFYGEVLGCKEGRSTD-------T------WVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPH   72 (138)
T ss_pred             eEEeeeccccHHHHhhhhhhcccccccccc-------e------EEEeeecccEEEEEecCCcccccCcccCCCCCCCcc
Confidence            344444449999999999999998754321       1      33333323 2 222322211111  1   1112344


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEEecCccccc-ccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNG-ACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~-~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +-+.|.++|..++.+++.++|.....+|...+- +-+-++-.++.||.||.+++-...
T Consensus        73 fGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          73 FGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             ceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            557888999999999999999988888877654 111348889999999999997654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.70  E-value=1.4e-07  Score=73.14  Aligned_cols=119  Identities=16%  Similarity=0.211  Sum_probs=80.4

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc-------cccCCCCceEEEEEEEC----CeEEEEecCCC
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR-------KAEQELPLISCAQLEIA----GSTFLVSDVSG   89 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~-------~~~g~~~~v~~~~l~~g----~~~l~l~d~~~   89 (165)
                      +.+++-..|+.++++|..+.++||+++||+++.+..+.+++       ..++   +-.-.++-.|    ...|.|..+.+
T Consensus        12 ~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~---kwSktmvGyGpEdshFViELTYNYg   88 (299)
T KOG2943|consen   12 KADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDG---KWSKTMVGYGPEDSHFVIELTYNYG   88 (299)
T ss_pred             hccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCccc---chhhhheecCCCcccEEEEEEeccC
Confidence            34566667777777899999999999999999877655530       0011   1111122222    22444554433


Q ss_pred             CCcccccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           90 DSAAAQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        90 ~~~~~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      -.  ....++.+ +|.|.++|+-+..+++...|++        ..   |...+.++||+|+.+.|..
T Consensus        89 V~--~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~---g~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   89 VS--KYELGNDFGGITIASDDVFSKVEKVNAPGGK--------GS---GCGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             cc--ceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------cc---ceEEEEEECCCCcEEEEec
Confidence            21  35677777 8999999988888888777763        12   5578899999999999997

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.69  E-value=2.6e-07  Score=70.25  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=66.1

Q ss_pred             EEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE--CCeEEEEecCCC--CCcc-----cc
Q 031118           27 KPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI--AGSTFLVSDVSG--DSAA-----AQ   95 (165)
Q Consensus        27 ~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~--g~~~l~l~d~~~--~~~~-----~~   95 (165)
                      +.|+.+.|+  |++++++||+++|||+.......+.    .. ..+....+..  ++..|.+.....  ....     ..
T Consensus         4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~----~~-~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIED----PY-SGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             eeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCc----Cc-ccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHH
Confidence            456777777  9999999999999999876653221    00 0122223333  234565654332  1110     12


Q ss_pred             cCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCccc
Q 031118           96 TVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEG  131 (165)
Q Consensus        96 ~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~  131 (165)
                      ..+.++ ||+|.|+|+++++++++++|++++.+|...
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~y  115 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPDNY  115 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCchhh
Confidence            234555 999999999999999999999999888654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.59  E-value=3.4e-07  Score=62.71  Aligned_cols=118  Identities=19%  Similarity=0.149  Sum_probs=66.8

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEec------CCCCCc-c
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSD------VSGDSA-A   93 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d------~~~~~~-~   93 (165)
                      ...+.|.|+  |+++|++||+++||++.........    ..  ......+.. ..   .......      ...... .
T Consensus         3 l~hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T COG0346           3 IHHVTLAVP--DLEASIDFYTDVLGLRLVKDTVNEA----DD--GGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDV   74 (138)
T ss_pred             eEEEEEeeC--CHhHhHHHHHhhcCCeeeeeccccc----CC--ceEEEEEeccCCCCcccceeecccccccccccccce
Confidence            345556666  9999999999999999987642111    00  000111111 10   0111000      000000 0


Q ss_pred             -cccC---CccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           94 -AQTV---GTGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        94 -~~~~---~~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                       ....   ....++++.+++   ..+.+......|..+...+. ..+   + ..+||+||+|++|++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~---~-~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          75 ALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG---G-VHVYFRDPDGILIELAT  138 (138)
T ss_pred             EEeecCchhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc---c-eEEEEECCCCcEEEeeC
Confidence             0111   235689999998   55556666677877665544 444   4 39999999999999864

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.39  E-value=2.8e-06  Score=66.02  Aligned_cols=117  Identities=13%  Similarity=0.137  Sum_probs=77.2

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCCCCCcccccCCc-cEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVSGDSAAAQTVGT-GCV  102 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~~~~~~~~~~~~-~~~  102 (165)
                      ....|.|.  |+++|+.||.++||+++.... ...          .-+.|..+  .+.|.+......  .+...+. ...
T Consensus       151 ~~V~l~Vg--dL~ks~kyw~~~lgM~ileke-ek~----------t~~~mgYgd~q~~LElt~~~~~--id~~kg~gria  215 (299)
T KOG2943|consen  151 LQVMLNVG--DLQKSIKYWEKLLGMKILEKE-EKY----------TRARMGYGDEQCVLELTYNYDV--IDRAKGFGRIA  215 (299)
T ss_pred             EEEEEEeh--hHHHHHHHHHHHhCcchhhhh-hhh----------hhhhhccCCcceEEEEEeccCc--ccccccceeEE
Confidence            45566666  999999999999999987531 110          01222222  356666544321  0123333 456


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccc-cCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGA-CCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~-~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |++-.+++..+-+.++..+++|+.++...... .-+..+..+.||||+.++|+...
T Consensus       216 faip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  216 FAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             EeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            78888888888888899999988876654321 11458889999999999998654

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.34  E-value=7.2e-06  Score=67.84  Aligned_cols=127  Identities=18%  Similarity=0.150  Sum_probs=77.7

Q ss_pred             eEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCC-CC-Ccc-----cc
Q 031118           26 MKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVS-GD-SAA-----AQ   95 (165)
Q Consensus        26 ~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~-~~-~~~-----~~   95 (165)
                      -+.|+.+.+.  |+++++.||+++|||+.....+.+.    ........+...- ++..|.+.... .. ...     ..
T Consensus       158 ~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~----~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       158 AIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKT----EYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             EeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEecc----CCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            3678888887  9999999999999999876643221    1111111222211 33556665421 11 010     12


Q ss_pred             cCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCce----------------EEEEEcCCCCeEEEEeee
Q 031118           96 TVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGER----------------VGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        96 ~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~----------------~~~~~DP~G~~~~l~~~~  157 (165)
                      ..+.++ ||+|.|+|+++++++++++|+.++.+|......- ..|                .-+=+|.+|.++++++..
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l-~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~~  311 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLL-GERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTKP  311 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHH-HHHhcccccchHHHHHHCCEEEecCCCceEEEEeccC
Confidence            234555 8999999999999999999999998774321100 001                123367788888887654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.00  E-value=0.00039  Score=58.48  Aligned_cols=123  Identities=16%  Similarity=0.082  Sum_probs=78.6

Q ss_pred             EEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CC--C---------------
Q 031118           30 LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GD--S---------------   91 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~--~---------------   91 (165)
                      |.+-++|+.++..||+..|||+.+.... ++   ++... .....++.|++.+.+.... +.  .               
T Consensus         4 vef~v~da~~~~~~f~~~~GF~~~a~~~-~~---tg~~~-~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T PLN02875          4 VEFWCGDATNTARRFSWGLGMPLVAKSD-LT---TGNTT-YASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFS   78 (398)
T ss_pred             EEEEcCCHHHHHHHHHHhcCCCeEeecC-CC---CCCcc-eEEEEEEeCCEEEEEeCCCCCccccccccccccccccccC
Confidence            3444449999999999999998876532 21   12111 1112235566777775542 20  0               


Q ss_pred             -c----ccccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccc-cCC-ceEEEEEcCCCCeEEEEeee
Q 031118           92 -A----AAQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGA-CCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        92 -~----~~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~-~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                       .    ....+|.++ -++|.|+|++++++++++.|++.+.+|...... ++| ..+.-++-+.|.++.|+...
T Consensus        79 ~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         79 SDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             cHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence             0    012456666 799999999999999999999999887754220 012 25556777777777777643

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.00  E-value=2.4e-05  Score=63.11  Aligned_cols=134  Identities=19%  Similarity=0.151  Sum_probs=83.1

Q ss_pred             cCCCCCCCCCCCCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEE--EECCeEEEEec
Q 031118            9 NGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQL--EIAGSTFLVSD   86 (165)
Q Consensus         9 ~~~~~~~~~~~~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l--~~g~~~l~l~d   86 (165)
                      .|+.|++.+..      ..-+|.+-|+|...+..||+..|||++.......    .+.   -.+++.  +.|.+.+.+..
T Consensus         6 k~~k~~~g~~l------~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~le----tg~---~~~~s~alr~g~~vFv~~s   72 (381)
T KOG0638|consen    6 KGAKPEAGKFL------RFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLE----TGS---REWASHALRQGKIVFVFNS   72 (381)
T ss_pred             CCCCcccccee------eeeEEEEEecCcHHHHHHHHhhcCCcchhccccc----ccc---hHHHHHHhhcCCEEEEEec
Confidence            46666664332      2344555555999999999999999986543211    111   012222  33445544433


Q ss_pred             CC-CC---Cc-ccccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           87 VS-GD---SA-AAQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        87 ~~-~~---~~-~~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .. |+   ++ ....++.++ .+||+|+|.+.+.+.+.++|+++..+|.....+-+-.+++.++.+--....+.+
T Consensus        73 ~~~p~~~~~G~~l~~HgdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvE  147 (381)
T KOG0638|consen   73 AYNPDNSEYGDHLVKHGDGVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVE  147 (381)
T ss_pred             CCCCCchhhhhhhhhcccchhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhh
Confidence            32 22   12 134566666 799999999999999999999999988765431112477777777655555444

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.81  E-value=0.0011  Score=46.55  Aligned_cols=112  Identities=13%  Similarity=0.186  Sum_probs=59.5

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc-cc-cCCccEEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA-AQ-TVGTGCVL  103 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~-~~-~~~~~~~i  103 (165)
                      ++|.|.|.  |-+.-++||++.|||++....        +.  .+.+.. +.+...+.+.+ .|.... .. ..-....+
T Consensus         2 ~~PvlRVn--nR~~ni~FY~~~LGfkll~EE--------na--~a~lg~-~~~~erlvlEE-SP~~rtr~V~G~KKl~~i   67 (125)
T PF14506_consen    2 IIPVLRVN--NRDLNIDFYQKTLGFKLLSEE--------NA--LAILGD-QQKEERLVLEE-SPSMRTRAVEGPKKLNRI   67 (125)
T ss_dssp             EEEEEEES--SHHHHHHHHTTTT--EEEEEE--------TT--EEEEE--TT--EEEEEEE---TTT-B--SSS-SEEEE
T ss_pred             cCceEEEc--CHHHhHHHHHhccCcEEeecc--------cc--EEEecC-CCCceEEEEec-CCccccccccCcceeeEE
Confidence            57899999  999999999999999998652        21  112222 21223555543 343221 11 22234478


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          104 CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .+.|.+..+ ++.+++.|.++..--+ ..    ..+-+-..+|.|.+|.|....
T Consensus        68 vIkv~~~~E-Ie~LLar~~~~~~l~k-g~----~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   68 VIKVPNPKE-IEALLARGAQYDRLYK-GK----NGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             EEEESSHHH-HHHHHHC-S--SEEEE--S----SSEEEEEE-TT--EEEEE--S
T ss_pred             EEEcCCHHH-HHHHHhcccccceeEE-cC----CceEEEEECCCCCEEEEEEcC
Confidence            999998665 4667777766332211 11    236667789999999998653

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.81  E-value=0.00035  Score=58.77  Aligned_cols=105  Identities=12%  Similarity=0.074  Sum_probs=68.5

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCC----CCc--
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSG----DSA--   92 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~----~~~--   92 (165)
                      .+|+ .+.||.+.++|+++++.||+++|||+..+..+.++.  ......+.-..+...+  ..|-|.....    ...  
T Consensus       176 ~gl~-~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i--~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~  252 (398)
T PLN02875        176 YGLR-RLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDV--GTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQ  252 (398)
T ss_pred             CCcc-eeCcceechhhHHHHHHHHHHhcCCeeeeeeccccc--cccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHH
Confidence            4565 678888888899999999999999988765433210  0000012223334433  4565655421    111  


Q ss_pred             --ccccCCccE-EEEEEeCCHHHHHHHHHHC----CCeEEecC
Q 031118           93 --AAQTVGTGC-VLCLETEDVEAAVAKAVSA----GAVAEGEL  128 (165)
Q Consensus        93 --~~~~~~~~~-~i~~~V~dv~~~~~~~~~~----G~~i~~~p  128 (165)
                        .....|.++ ||+|.|+|+.++.++++++    |...+..|
T Consensus       253 eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        253 TYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence              123345666 9999999999999999998    99988755

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.47  E-value=0.0019  Score=46.75  Aligned_cols=114  Identities=18%  Similarity=0.233  Sum_probs=69.7

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc--ccccCCccE-EEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA--AAQTVGTGC-VLCL  105 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~--~~~~~~~~~-~i~~  105 (165)
                      +|-+.++|..++..|+ +.|||+.+.+-  .    ..   .+  .-++-|++.|.+........  ....+|.++ -|.|
T Consensus        12 FvEFa~~~~~~l~~~~-~~lGF~~~a~h--r----sk---~v--~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen   12 FVEFAVPDAQALAQLF-TALGFQPVARH--R----SK---DV--TLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEE-SSTTSCHHHH-CCCCEEEECCE--C----CC---SE--EEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             EEEEecCCHHHHHHHH-HHhCcceEEec--C----Cc---ce--EEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            4445555866666666 57999987542  1    11   12  23355888888865432111  124566776 7999


Q ss_pred             EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          106 ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       106 ~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .|+|.+.+++++++.|++...+|... .   ....--++-+.|.++-|+....
T Consensus        80 rV~Da~~A~~rA~~~GA~~~~~~~~~-~---e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   80 RVDDAAAAYERAVALGAEPVQEPTGP-G---ELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             EES-HHHHHHHHHHTT--EEEEEEET-T----BEEEEEE-CCC-EEEEEE--S
T ss_pred             EeCCHHHHHHHHHHcCCcCcccCCCC-C---cEeeeeEEccCCCEEEEEecCC
Confidence            99999999999999999988776332 2   3366688888888888887654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.99  E-value=0.0021  Score=52.78  Aligned_cols=99  Identities=19%  Similarity=0.153  Sum_probs=64.7

Q ss_pred             eEEEEEEe--cCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEE-EEE-CC-eEEEEecCCCCCc-----ccc
Q 031118           26 MKPQLLVE--APKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQ-LEI-AG-STFLVSDVSGDSA-----AAQ   95 (165)
Q Consensus        26 ~~~~l~v~--~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~-l~~-g~-~~l~l~d~~~~~~-----~~~   95 (165)
                      .+.||+..  ...++.+..||+++|+|+.....+.+.    ..  ..++++ |.. +| ..|-|.....+..     ...
T Consensus       167 ~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~----p~--tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         167 AIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPG----PI--TGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             eechhhhhcchhhHHHHHHHHHHHhCccceeeEeccC----Cc--ccEEEeeEecCCCcEEeecccCCCchhHHHHHHHH
Confidence            44454443  359999999999999999876665442    10  123333 222 23 2444433332211     134


Q ss_pred             cCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcc
Q 031118           96 TVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAE  130 (165)
Q Consensus        96 ~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~  130 (165)
                      ..|.++ ||+|.++|+-++.++++++|.+.+..|..
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~t  276 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPET  276 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCCCchh
Confidence            566666 99999999999999999999999987765

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=96.48  E-value=0.062  Score=42.74  Aligned_cols=34  Identities=26%  Similarity=0.266  Sum_probs=26.4

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEE
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGR   55 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~   55 (165)
                      |.+..-=..+|.|.  |+++|.+||+++|||+...+
T Consensus       164 p~~t~IGHvHL~v~--~l~eA~~fY~~~LG~~~~~~  197 (265)
T COG2514         164 PAGTIIGHVHLKVA--DLEEAEQFYEDVLGLEVTAR  197 (265)
T ss_pred             CCCcEEeEEEEEeC--CHHHHHHHHHHhcCCeeeec
Confidence            44444455666666  99999999999999998766

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=96.35  E-value=0.045  Score=40.56  Aligned_cols=89  Identities=17%  Similarity=0.199  Sum_probs=45.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCC-----cc-----cccC
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDS-----AA-----AQTV   97 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~-----~~-----~~~~   97 (165)
                      .||.+-+.|++++.++|++.|||.+......+.   -|    .....+.+++..|.+....+..     +.     ....
T Consensus         2 DH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~---~G----T~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    2 DHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPG---WG----TANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEE-TTGGG----GGGS--S--EEEEE-TT---T-----EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CEEEEEcCCHHHHHHhhhhcceEeecCCCcCCC---Cc----cEEEEEeeCCceEEEEEeCCcccccccccceechhhcC
Confidence            355555559999999998899999987654442   11    2234445677677665433211     10     0123


Q ss_pred             CccE-EEEEEeCCHHHHHHHHHHCCCe
Q 031118           98 GTGC-VLCLETEDVEAAVAKAVSAGAV  123 (165)
Q Consensus        98 ~~~~-~i~~~V~dv~~~~~~~~~~G~~  123 (165)
                      +.++ .+||.++|+++..+++.+.|..
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            4555 8999999999999999999965

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.31  E-value=0.082  Score=35.89  Aligned_cols=56  Identities=18%  Similarity=0.102  Sum_probs=43.8

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEEecCcccccccCCceEEEEEcCCC-CeEEEEeeeccc
Q 031118          102 VLCLETEDVEAAVAKAVS-AGAVAEGELAEGNGACCGERVGKVKDPYG-FTWLICSPVKKC  160 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~-~G~~i~~~p~~~~~~~~G~~~~~~~DP~G-~~~~l~~~~~~~  160 (165)
                      |+.|.|.|++++.+...+ .|............   +.+..++..++| ..++|+++..+.
T Consensus         2 Hv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~---~v~~~~~~~~~~~~~iELi~p~~~~   59 (109)
T PF13669_consen    2 HVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQ---GVRVAFLYLGDGPVQIELIQPLDGD   59 (109)
T ss_dssp             EEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCT---TEEEEEEEETTETEEEEEEEESSTT
T ss_pred             EEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCC---CEEEEEEEeCCCcEEEEEEEeCCCC
Confidence            799999999999998887 88776654444444   668889999998 689999987654

>PF15067 FAM124: FAM124 family

Probab=93.72  E-value=1  Score=35.28  Aligned_cols=99  Identities=17%  Similarity=0.205  Sum_probs=57.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE---CCeEEEEe--cCCCCCcccccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI---AGSTFLVS--DVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~---g~~~l~l~--d~~~~~~~~~~~~~~~~  102 (165)
                      ..|.++-+|.+.+++||+-+|+-+.....       ++      +..+.+   -+..|+++  ...+..  .........
T Consensus       132 ftly~~~~N~~d~vr~Yelil~~~~~~~k-------~~------FC~F~lys~~~~~iQlsLK~lp~~~--~p~p~esav  196 (236)
T PF15067_consen  132 FTLYCSFDNYEDMVRFYELILQREPTQQK-------ED------FCFFTLYSQPGLDIQLSLKQLPPGM--SPEPTESAV  196 (236)
T ss_pred             EEEEecCCCHHHHHHHHHHHhccCcceee-------CC------cEEEEEecCCCeEEEEEeccCCCCC--CcccccceE
Confidence            33444434999999999999998875442       12      333332   23455543  222221  233445667


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEE
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI  153 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l  153 (165)
                      +.|.|.|+-++.-- +-+.+.   +..+.-|        ..+|||||.|-|
T Consensus       197 LqF~V~~igqLvpL-LPnpc~---PIS~~rW--------qT~D~DGNkILL  235 (236)
T PF15067_consen  197 LQFRVEDIGQLVPL-LPNPCS---PISETRW--------QTEDYDGNKILL  235 (236)
T ss_pred             EEEEecchhhhccc-CCCCcc---cccCCcc--------eeeCCCCCEecc
Confidence            99999998876542 222222   2222223        489999999854

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=93.43  E-value=1.8  Score=35.99  Aligned_cols=109  Identities=15%  Similarity=0.171  Sum_probs=64.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc--ccccCCccE-EEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA--AAQTVGTGC-VLC  104 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~--~~~~~~~~~-~i~  104 (165)
                      -+|-+.++|.+.++.=|-..|||.....-  .    .    + .....+-|+..|.+......+.  ....++.+. .+.
T Consensus        24 eFvEf~~~d~~~~l~~l~~~lGF~~~~~H--r----s----k-~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~~a~a   92 (363)
T COG3185          24 EFVEFAVPDPQEALGALLGQLGFTAVAKH--R----S----K-AVTLYRQGDINLVVNAEPDSFAAEFLDKHGPSACAMA   92 (363)
T ss_pred             eEEEEecCCHHHHHHHHHHHhCccccccc--c----c----c-ceeEEEeCCEEEEEcCCCcchhhHHHHhcCCchheeE
Confidence            34555555995555555557999875431  1    0    1 1223344777777755432211  123455554 799


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcc-----ccc-ccCCceEEEEEcCC
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAE-----GNG-ACCGERVGKVKDPY  147 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~-----~~~-~~~G~~~~~~~DP~  147 (165)
                      |.|+|.+.+++++++.|++....+..     .|- ..-|....|+-|.+
T Consensus        93 ~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          93 FRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             EeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            99999999999999999965544331     110 00144777888888

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=90.45  E-value=0.3  Score=39.99  Aligned_cols=131  Identities=14%  Similarity=0.126  Sum_probs=75.2

Q ss_pred             eeEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEE-EecCCCCC-c-------
Q 031118           25 GMKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFL-VSDVSGDS-A-------   92 (165)
Q Consensus        25 ~~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~-l~d~~~~~-~-------   92 (165)
                      +++.|+.-.++  .++.+++||.+.|||..-+..+.+....+ .+. +-...+.. .+...| +.+..+.. .       
T Consensus       177 ~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te-~Sa-Lrs~vlan~~esi~mpinEp~~G~k~ksQIqey  254 (381)
T KOG0638|consen  177 NRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTE-YSA-LRSIVLANYEESIKMPINEPAPGKKKKSQIQEY  254 (381)
T ss_pred             eehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhH-HHH-HHHHHHhcCCccEEEeccCCCCCCccHHHHHHH
Confidence            35566666555  78899999999999977655433220000 000 00000111 222333 33333321 1       


Q ss_pred             ccccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccc-----c-------C------CceEEEEEcCCCCeEEE
Q 031118           93 AAQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGA-----C-------C------GERVGKVKDPYGFTWLI  153 (165)
Q Consensus        93 ~~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~-----~-------~------G~~~~~~~DP~G~~~~l  153 (165)
                      .....|.++ ||+|.++|+=++.+.++++|+..+.+|......     +       +      -.....=.|-.|++++|
T Consensus       255 v~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQI  334 (381)
T KOG0638|consen  255 VEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQI  334 (381)
T ss_pred             HHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEeee
Confidence            023445565 999999999999999999999999877542110     0       0      00122336788999999


Q ss_pred             Eeee
Q 031118          154 CSPV  157 (165)
Q Consensus       154 ~~~~  157 (165)
                      ++..
T Consensus       335 FTKp  338 (381)
T KOG0638|consen  335 FTKP  338 (381)
T ss_pred             eccc
Confidence            8643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	165
1xy7_A	166	X-Ray Structure Of Gene Product From Arabidopsis Th		3e-18

>pdb|1XY7|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At5g48480 Length = 166

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 23  FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTF 82
           FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F
Sbjct: 23  FTEFKQXLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSF 82
Query: 83  LVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXXCCGERV 140
           +V DVS     + A++ G+G    L T+D                               
Sbjct: 83  VVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK--- 139
Query: 141 GKVKDPYGFTWLIC 154
           GKV DP+G TW+  
Sbjct: 140 GKVTDPFGVTWIFA 153

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
1xy7_A	166	Unknown protein; structural genomics, protein stru	6e-35
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	1e-20
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	6e-18
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	6e-17
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	7e-15
3l20_A	172	Putative uncharacterized protein; hypothetical pro	6e-14
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-11
1tsj_A	139	Conserved hypothetical protein; structural genomic	2e-10
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-09
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-08
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	8e-08
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-07
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-05
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-04
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	5e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	8e-04
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	8e-04

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score =  119 bits (298), Expect = 6e-35
 Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 5/160 (3%)

Query: 1   MADVQEVQNGAAPEKAPATAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETK 60
           MA                T   FT  K  LLVEA K  DAV FYK+AFGA+E G S+  K
Sbjct: 1   MAQEDVTAVATNGAGPVETHLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPK 60

Query: 61  RKAEQELPLISCAQLEIAGSTFLVSDVSGD--SAAAQTVGTGCVLCLETEDVEAAVAKAV 118
           RK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D EAAVAKAV
Sbjct: 61  RKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAV 120

Query: 119 SAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK 158
            AGAV                 GKV DP+G TW+      
Sbjct: 121 DAGAVKVEVTEA---EVELGFKGKVTDPFGVTWIFAEKKT 157

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7 Length = 149

 Score = 81.9 bits (202), Expect = 1e-20
 Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 8/132 (6%)

Query: 36  KATDAVQFYKTAFGAVEIGRSVETKRKAEQELP-----LISCAQLEIAGSTFLVSDVSGD 90
              +A   Y    G                ++P      I  A+L +     + SD    
Sbjct: 14  NCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPA 73

Query: 91  SAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFT 150
                  G    L ++++     +  A++ G   +  L            G   D +G  
Sbjct: 74  YPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGP---TFWAASFGMFTDRFGVA 130

Query: 151 WLICSPVKKCAG 162
           W++     +  G
Sbjct: 131 WMVNCEQDREGG 142

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7 Length = 136

 Score = 74.6 bits (183), Expect = 6e-18
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 3/126 (2%)

Query: 28  PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV 87
           P L+ +  +A  A+ FY + F   EI +      +       +  A   +   +    D 
Sbjct: 9   PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDS 68

Query: 88  SGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPY 147
               A   T      +  E+      +A+A+S G  A   L +       +R   + D +
Sbjct: 69  HVRHAFDFTPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGF---SQRFAWLADRF 125

Query: 148 GFTWLI 153
           G +W +
Sbjct: 126 GVSWQL 131

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 71.8 bits (176), Expect = 6e-17
 Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 14/132 (10%)

Query: 28  PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV 87
            +L    P    AV +    FG   + R              I  A L+  G   +V   
Sbjct: 6   VELAYTDPDR--AVDWLVRVFGFRLLLRQPAIGT--------IRHADLDTGGGIVMVRRT 55

Query: 88  SGDSAAAQTVGTGCV-LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDP 146
                 +   G  C  + +   DV+    ++ +AGA     L +      G R   V+D 
Sbjct: 56  GEPYTVSCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPW---GLRQYLVRDL 112

Query: 147 YGFTWLICSPVK 158
            G  W     ++
Sbjct: 113 EGHLWEFTRHLR 124

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} Length = 138

 Score = 66.6 bits (162), Expect = 7e-15
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 7/120 (5%)

Query: 36  KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQ 95
           KA +A+ FY + F   EI            +   +  A   + G  F+  D   +     
Sbjct: 20  KAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF-- 77

Query: 96  TVGTGCVLCLETEDVEAAVA--KAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI 153
           T      L +  E  E        ++        L         ++ G + D YG +W +
Sbjct: 78  TFTPAMSLYVTCETEEEIDTVFHKLAQDGAILMPLGS---YPFSKKFGWLNDKYGVSWQL 134

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus} Length = 172

 Score = 65.0 bits (158), Expect = 6e-14
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 14/129 (10%)

Query: 37  ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPL-------ISCAQLEIAGSTFLVSDVSG 89
           + +A+ +Y+  FGA ++ R    + +A                A+ E+ G   L SD  G
Sbjct: 36  SKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFG 95

Query: 90  DSAAAQ-----TVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVK 144
            +          +        + + VEA   +     ++             G ++G   
Sbjct: 96  RADKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFW--GGKMGVFT 153

Query: 145 DPYGFTWLI 153
           D YG  W++
Sbjct: 154 DKYGVRWML 162

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7 Length = 139

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 37  ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQT 96
           A +AV+ Y + F   EI    +       +   +  +   + G  F+  D +  +    +
Sbjct: 16  AEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTELPIS 75

Query: 97  VGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP 156
           +    V   +T ++E         GA+   +               V+D +G ++ +  P
Sbjct: 76  L---FVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFA----WVQDKFGVSFQLALP 128

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 19/125 (15%)

Query: 25  GMK-PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFL 83
            M   QL +            +      +   + +              AQ  I     +
Sbjct: 3   AMNLNQLDIIVSNVPQVCADLEHILDK-KADYANDG------------FAQFTIGSHCLM 49

Query: 84  VSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKV 143
           +S         +   +G ++ +E EDV+    +    G          +    G     V
Sbjct: 50  LS--QNHLVPLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW---GTESLLV 104

Query: 144 KDPYG 148
           + P G
Sbjct: 105 QGPAG 109

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 17/138 (12%)

Query: 21  ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS 80
           +    + P L +   +   A+  +    G     R                 A LE++G 
Sbjct: 4   SDIHQITPFLHIPDMQE--ALTLFCDTLGFELKYRHSNY-------------AYLELSGC 48

Query: 81  TFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACC-GER 139
              + +          +     +C++  D+++   K   A      +  E       G+R
Sbjct: 49  GLRLLEEPARKIIPDGIA-RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQR 107

Query: 140 VGKVKDPYGFTWLICSPV 157
             +V+ P G      +P+
Sbjct: 108 EFQVRMPDGDWLNFTAPL 125

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           +++FY+   G  EI    ++    E  L      +L       + S      A       
Sbjct: 18  SLEFYR-KLGV-EIPAEADSAPHTEAVLD--GGIRLAWDTVETVRSYDPEWQAPTGGHRF 73

Query: 100 G-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV 157
                  +T  V+   A+ V AG     +      A  G+R   VKDP G    + +P+
Sbjct: 74  AIAFEFPDTASVDKKYAELVDAGYEGHLKPWN---AVWGQRYAIVKDPDGNVVDLFAPL 129

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 16/142 (11%)

Query: 23  FTGMK---PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG 79
           F GM+   P   V       +  FY+   G   +            E          +  
Sbjct: 4   FQGMRFVNPIPFVRDINR--SKSFYRDRLGLKILEDFGSF---VLFETGFAIHEGRSLEE 58

Query: 80  STFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGER 139
           + +  S  + ++          +L  E  DV+AA    ++        L        G+R
Sbjct: 59  TIWRTSSDAQEAYG----RRNMLLYFEHADVDAAFQD-IAPHVELIHPLERQAW---GQR 110

Query: 140 VGKVKDPYGFTWLICSPVKKCA 161
           V +  DP G    +   + +  
Sbjct: 111 VFRFYDPDGHAIEVGESLSQSG 132

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 42.2 bits (99), Expect = 1e-05
 Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 14/123 (11%)

Query: 40  AVQFYKTAFGAVEIGR----SVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQ 95
              FY+  FG  EI              +  +   +    E+                  
Sbjct: 22  MSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIKFLLNF 81

Query: 96  TVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS 155
            V T        E V+  V  A++AGA       E            + DP    + I +
Sbjct: 82  DVDT-------KEAVDKLVPVAIAAGATLIKAPYETYY---HWYQAVLLDPERNVFRINN 131

Query: 156 PVK 158
            ++
Sbjct: 132 VLE 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 17/142 (11%), Positives = 41/142 (28%), Gaps = 12/142 (8%)

Query: 21  ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS 80
           +    + P+L         +  F+    G  E+      +      L       + + G 
Sbjct: 2   SLTLRVVPELYCFDINV--SQSFFVDVLGF-EVKYERPDEEFVYLTLD---GVDVMLEGI 55

Query: 81  TFLVSDVSGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAV-----AEGELAEGNGAC 135
                           +G+G     +  D+E    +   + A       E +  +   + 
Sbjct: 56  AGKSRKWLSGDLEF-PLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSI 114

Query: 136 CGERVGKVKDPYGFTWLICSPV 157
             ++   V+ P G+ +  C  +
Sbjct: 115 ATQKQFMVQTPDGYLFRFCQDI 136

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 22/115 (19%), Positives = 33/115 (28%), Gaps = 9/115 (7%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           + +FY   FG   + R+       E     ++   L       L  DV     +      
Sbjct: 19  SARFYGEGFGWAPVFRN------PEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMA 72

Query: 100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC 154
                    +V   + + V+AG               G   G V DP G  W I 
Sbjct: 73  LAHNVRAETEVAPLMERLVAAGGQLLRPADA---PPHGGLRGYVADPDGHIWEIA 124

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 21/128 (16%)

Query: 28  PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV 87
             +    P    A  FY    G                 +   S        +   VS  
Sbjct: 11  ANIATPEPAR--AQAFYGDILGM-------PVAMDHGWIVTHASPL-----EAHAQVSFA 56

Query: 88  SGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPY 147
               +          L +E ++ +   A+ + AG   E           G +   ++DP+
Sbjct: 57  REGGSGTDVPD----LSIEVDNFDEVHARILKAGLPIEYGPVTEAW---GVQRLFLRDPF 109

Query: 148 GFTWLICS 155
           G    I S
Sbjct: 110 GKLINILS 117

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
           + +FY    G   I  +   KR   +        +LEI G+    S+             
Sbjct: 19  SYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPRE 78

Query: 100 GCVL---CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDP 146
            C L       EDVEA+  + ++ G   E    +      G+++    DP
Sbjct: 79  ACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYT---GKKMAFFFDP 125

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 37.0 bits (85), Expect = 8e-04
 Identities = 14/131 (10%), Positives = 35/131 (26%), Gaps = 9/131 (6%)

Query: 28  PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV 87
           P    +    T  V++++   G      + + +   +        +++ +A  T      
Sbjct: 25  PVYFTKDMDKT--VKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPF---- 78

Query: 88  SGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPY 147
            G          G    +  E ++A        G     ++        G R   +    
Sbjct: 79  RGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQP---WGARECSITTTD 135

Query: 148 GFTWLICSPVK 158
           G        ++
Sbjct: 136 GCILRFFESIQ 146

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 39  DAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVG 98
            A++ +K      E     +  RK   +  +    ++E      LV+    DS   +T+ 
Sbjct: 20  SALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVE------LVAPDGEDSPINKTIK 73

Query: 99  TGCV---LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYG 148
            G     +C E ED++ ++ +    G     +           +V  +     
Sbjct: 74  KGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAI-DNRKVAFLFSTDI 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	165
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.92
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.91
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.9
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.89
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.88
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.88
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.88
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.85
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.83
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.83
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.82
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.82
2i7r_A	118	Conserved domain protein; structural genomics cons	99.82
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.81
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.8
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	99.79
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.79
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.78
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.78
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.78
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.78
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.77
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.75
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.75
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.75
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.75
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.74
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.73
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.73
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.73
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.73
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.72
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.72
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.72
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.72
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.71
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.71
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.71
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.7
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.7
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.7
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.69
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.69
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.68
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.68
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.68
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
3ghj_A	141	Putative integron gene cassette protein; integron	99.67
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.66
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.65
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.64
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.63
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.62
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.6
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.6
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.46
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.45
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.4
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.39
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.38
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.38
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.38
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.38
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.37
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.36
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.36
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.36
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.35
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.34
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.33
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.33
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.33
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.31
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.3
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.3
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.3
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.29
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.28
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.27
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.27
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.22
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.21
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.2
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.2
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.18
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.11
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.08
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.95
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	98.68
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.66
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.65
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.65
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.57
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.38
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.21
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.18
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.52
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	85.58
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	82.3
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	81.99
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	81.9
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	80.63
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	80.35

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.92  E-value=1.1e-23  Score=151.52  Aligned_cols=130  Identities=18%  Similarity=0.259  Sum_probs=102.1

Q ss_pred             CCCCcceeEEEEEEecCCHHHHHHHHHHhhC-CEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccC
Q 031118           19 TAASFTGMKPQLLVEAPKATDAVQFYKTAFG-AVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTV   97 (165)
Q Consensus        19 ~~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG-~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~   97 (165)
                      -.++|+++.|+|.+.+ |+++|++||+++|| .++.....+++.. .+..++++|+.|++++..|++.|..+..  ....
T Consensus         4 m~~~~~~i~P~L~f~g-~a~eA~~FY~~vFg~~~i~~~~~~~~~~-~~~~g~v~ha~l~i~g~~lm~~d~~~~~--~~~~   79 (138)
T 3oms_A            4 MSNANQKITTFLMFEG-KAEEAMNFYTSLFDQSEIVSISRYDENG-PGKEGTVIHATFTLNGQEFMCIDSYVNH--NFTF   79 (138)
T ss_dssp             -----CCCCEEEEESS-CHHHHHHHHHTTSTTCCEEEEEECCTTC-SSCTTSEEEEEEEETTEEEEEEECSSCC--SCCC
T ss_pred             cccccccEEEEEEECC-CHHHHHHHHHHHcCCceEEEEEecCCCC-CCCCCcEEEEEEEECCEEEEEEcCCCCC--CCCC
Confidence            3566899999999985 89999999999999 5775543333210 1223579999999999999998865432  1345


Q ss_pred             CccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           98 GTGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        98 ~~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +++++|+|.|+|   ++++++++ ++|++++++|.+.+|   |.++++|+||+|+.|+|..+
T Consensus        80 ~~~~~l~l~~~d~~evd~~~~~l-~~Gg~v~~p~~~~~w---g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           80 TPAMSLYVTCETEEEIDTVFHKL-AQDGAILMPLGSYPF---SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             CTTSCEEEEESSHHHHHHHHHHH-HTTCEEEEEEEEETT---EEEEEEEECTTSCEEEEEEC
T ss_pred             CCCEEEEEEcCCHHHHHHHHHHH-HcCCeEecCcccccC---CcEEEEEECCCCCEEEEEeC
Confidence            678899999999   88889997 679999999999999   99999999999999999764

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.91  E-value=1.8e-23  Score=154.07  Aligned_cols=143  Identities=48%  Similarity=0.707  Sum_probs=96.6

Q ss_pred             hhcCCCCCCCCCCCCCcceeEEEEEEecCC--HHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEE
Q 031118            7 VQNGAAPEKAPATAASFTGMKPQLLVEAPK--ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLV   84 (165)
Q Consensus         7 ~~~~~~~~~~~~~~~~m~~~~~~l~v~~~D--~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l   84 (165)
                      +|||+++   .+++.++++++++|.|+  |  +++|++||+++||+++.....++.....+....+.|+.+.+++..|++
T Consensus        10 ~~~~~~~---~~~~~~~~~i~~~L~v~--D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l   84 (166)
T 1xy7_A           10 ATNGAGP---VETHLVFTEFKQMLLVE--AQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVV   84 (166)
T ss_dssp             -------------CCCEEEEEEEEEEC--TTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEE
T ss_pred             hhcCCcc---ccCCCCCceEEEEEEEC--CcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEE
Confidence            4999988   44677899999999999  8  999999999999999865431110000010124668888888888887


Q ss_pred             ecCCCCCcccccC--CccEEEEEEeCCHHHHHHHHHHCCCeEEecCccc--ccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           85 SDVSGDSAAAQTV--GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEG--NGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        85 ~d~~~~~~~~~~~--~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~--~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      .+..+........  +.+++|+|.|+|+++++++++++|++ +++|.+.  +|   + ++++|+||+||+|+|+++...
T Consensus        85 ~~~~~~~~~~~~~~~~~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~---~-r~~~v~DP~G~~~~l~~~~~~  158 (166)
T 1xy7_A           85 CDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL---G-FKGKVTDPFGVTWIFAEKKTV  158 (166)
T ss_dssp             EEGGGSTTCCCCCTTSCCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT---T-EEEEEECTTSCEEEEEC----
T ss_pred             eCCCcccCCccccCCCCcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc---c-EEEEEECCCCCEEEEEeecCC
Confidence            6643321101112  56679999999999999999999999 9999998  88   6 999999999999999997744

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.90  E-value=2.4e-22  Score=149.31  Aligned_cols=128  Identities=24%  Similarity=0.406  Sum_probs=103.0

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccC-------CCCceEEEEEEECCeEEEEecCCCCCccc
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQ-------ELPLISCAQLEIAGSTFLVSDVSGDSAAA   94 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g-------~~~~v~~~~l~~g~~~l~l~d~~~~~~~~   94 (165)
                      -|++++|+|.+.  |+++|++||+++||+++.......+...+.       ..++++|+.|++++..|++.|....   .
T Consensus        23 mm~~i~PyL~f~--~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~---~   97 (172)
T 3l20_A           23 YMTALFPYIAFE--NSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR---A   97 (172)
T ss_dssp             CCCEEEEEEEES--CHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC---C
T ss_pred             ecCcEEEEEEEC--CHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC---C
Confidence            367899999999  999999999999999987665432210000       0247999999999999999886421   2


Q ss_pred             ccCCccEEEEEEe--------CCHHHHHHHHHHCC-CeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           95 QTVGTGCVLCLET--------EDVEAAVAKAVSAG-AVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        95 ~~~~~~~~i~~~V--------~dv~~~~~~~~~~G-~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ...+++++++|.+        +|++++++++.+.| ++++++|.+.+|   |.++++|+||||+.|+|....
T Consensus        98 ~~~~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~w---G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           98 DKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFW---GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             CCCCSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTT---SSEEEEEECTTSCEEEEEEEC
T ss_pred             CCCCCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCC---CcEEEEEECCCCCEEEEEeCC
Confidence            3456677888887        57888899999998 699999999999   999999999999999998754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.89  E-value=2.7e-21  Score=137.73  Aligned_cols=126  Identities=16%  Similarity=0.193  Sum_probs=99.3

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhh-CCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAF-GAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vl-G~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      .++.++|.|.+.|+++|++||+++| |+++......++...+. ...+.|+.+.+++..+++.+....  +....+.+++
T Consensus         5 ~~i~~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~-~~~~~~a~~~~~g~~~~~~~~~~~--~~~~~~~~~~   81 (136)
T 1u7i_A            5 ARVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGP-EGSVLKALFRLGDQSVHCIDSHVR--HAFDFTPAFS   81 (136)
T ss_dssp             CEEEEEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSC-TTSEEEEEEEETTEEEEEEEESSC--CSCCCCTTEE
T ss_pred             ccceEEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCC-CCcEEEEEEEECCEEEEEECCCCC--CCCCCCCceE
Confidence            5788999998559999999999999 99987543222100001 136889999999988877664311  0122356789


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|   ++++++++. +|++++++|.+.+|   |.++++|+||+||.|+|.++
T Consensus        82 l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~---G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           82 FFVDCESNAQIERLAEALS-DGGKALMPLGDYGF---SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSS---SSEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHH-cCCEEecccccCCC---cceEEEEECCCCCEEEEEec
Confidence            9999999   999999999 99999999999999   99999999999999999874

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.88  E-value=1.2e-21  Score=140.80  Aligned_cols=124  Identities=14%  Similarity=0.187  Sum_probs=94.5

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhh-CCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAF-GAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vl-G~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      .++.|+|.+.. |+++|++||+++| |+++.....+++..... .++++|+.|.+++..+++.+..+..    . .+ ++
T Consensus         4 ~~i~p~l~~~~-d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~-~~~v~ha~l~~~~~~~m~~d~~~~~----~-~~-~s   75 (139)
T 1tsj_A            4 PKITTFLMFNN-QAEEAVKLYTSLFEDSEIITMAKYGENGPGD-PGTVQHSIFTLNGQVFMAIDANSGT----E-LP-IS   75 (139)
T ss_dssp             CSEEEEEECSS-CHHHHHHHHHHHSSSCEEEEEEECC-----C-TTSEEEEEEEETTEEEEEEC------------C-CC
T ss_pred             CceeEEEEECC-CHHHHHHHHHHHcCCCEEEEEEecCcCCCCC-CCcEEEEEEEECCEEEEEECCCCCC----C-ce-EE
Confidence            36899998864 9999999999999 99997654332200001 2369999999999999988865431    1 12 78


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      |+|.|+|   ++++++++. +|++++++|++.+|   |.++++|+||||+.|+|..+..+
T Consensus        76 l~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~w---G~~~g~v~Dp~G~~W~i~~~~~~  131 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPP---YREFAWVQDKFGVSFQLALPEEG  131 (139)
T ss_dssp             EEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETT---EEEEEEEECTTSCEEEEEECC--
T ss_pred             EEEECCCHHHHHHHHHHHh-CCCEEeecccccCC---CceEEEEECCCCCEEEEeecccc
Confidence            9999998   566688876 89999999999999   99999999999999999987654

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.88  E-value=4.1e-21  Score=139.01  Aligned_cols=130  Identities=15%  Similarity=0.228  Sum_probs=99.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccc-----cCCCCceEEEEEEECCeEEEEecCCCCCcccccC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKA-----EQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTV   97 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~-----~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~   97 (165)
                      |+ +.++|.|.. |+++|++||+++||+++.....+++...     .+..+.+.|+.+.+++..|++.+..+...  ...
T Consensus         3 m~-~~p~L~v~~-d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~~~--~~~   78 (149)
T 1u6l_A            3 LQ-IVPYLIFNG-NCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP--YEG   78 (149)
T ss_dssp             CE-EEEEEEESS-CHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC--CCC
T ss_pred             ce-EEEEEEECC-CHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCccC--CCC
Confidence            44 889999974 9999999999999999876543322100     01013688999999998888877543211  112


Q ss_pred             CccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeeccc
Q 031118           98 GTGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKC  160 (165)
Q Consensus        98 ~~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~  160 (165)
                      ..+++++|.|+|   ++++++++ ++|++++++|.+.+|   |.++++|+||+|+.|+|+++..++
T Consensus        79 ~~g~~l~~~v~d~~evd~~~~~l-~~Gg~i~~p~~~~~w---G~r~~~v~Dp~G~~w~l~~~~~~~  140 (149)
T 1u6l_A           79 IKGCSISLNVDSKAEAERLFNAL-AEGGSVQMPLGPTFW---AASFGMFTDRFGVAWMVNCEQDRE  140 (149)
T ss_dssp             CCSEEEEEECSSHHHHHHHHHHH-HTTSEEEEEEEEETT---EEEEEEEECTTSCEEEEEESCC--
T ss_pred             CCceEEEEEcCCHHHHHHHHHHH-HCCCEEeecccccCc---ccceEEEECCCCCEEEEEEecccC
Confidence            345799999999   67889995 689999999999999   999999999999999999876554

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.88  E-value=2.7e-21  Score=136.57  Aligned_cols=122  Identities=21%  Similarity=0.262  Sum_probs=98.2

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccE-EE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGC-VL  103 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~-~i  103 (165)
                      .+.+.|.|+  |+++|++||+++||+++......+     +   .+.++.+..++..|++.+..+........+.++ ++
T Consensus         3 ~~~i~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~-----g---~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   72 (137)
T 3itw_A            3 HMVVELAYT--DPDRAVDWLVRVFGFRLLLRQPAI-----G---TIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQV   72 (137)
T ss_dssp             CCEEEEEES--CHHHHHHHHHHHHCCEEEEEESSS-----S---SCSEEEEECSSSEEEEEETTCCSSCEECCCCCCCEE
T ss_pred             eEEEEEEEC--CHHHHHHHHHHccCCEEEEEecCC-----C---cEEEEEEecCCeEEEEEecCCCcCccCCCCCcEEEE
Confidence            367888888  999999999999999998764211     1   355888888888888876554322112234556 99


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          104 CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      +|.|+|+++++++++++|+++..+|...+|   |.+.++|+||+||.|+|+++..+
T Consensus        73 ~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           73 IVWVSDVDEHFMRSTAAGADIVQPLQDKPW---GLRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             EEEESCHHHHHHHHHHTTCEEEEEEEEETT---TEEEEEEECSSSCEEEEEECC--
T ss_pred             EEEeCCHHHHHHHHHHcCCeeccCccccCC---CcEEEEEECCCCCEEEEEEEcCC
Confidence            999999999999999999999999999999   99999999999999999998754

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.85  E-value=3e-20  Score=131.26  Aligned_cols=120  Identities=17%  Similarity=0.219  Sum_probs=93.0

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCcc
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      +.|+++.+.|.|+  |+++|++||+++||+++....  +     +      ++.+..++..|.+........ ....+.+
T Consensus         4 ~~~~~~~~~l~v~--D~~~a~~FY~~~LG~~~~~~~--~-----~------~~~l~~~~~~l~l~~~~~~~~-~~~~~~~   67 (134)
T 3fcd_A            4 SDIHQITPFLHIP--DMQEALTLFCDTLGFELKYRH--S-----N------YAYLELSGCGLRLLEEPARKI-IPDGIAR   67 (134)
T ss_dssp             --CCEEEEEEEES--CHHHHHHHHTTTTCCEEEEEE--T-----T------EEEEEETTEEEEEEECCCC----------
T ss_pred             hhhhcceeEEEEC--CHHHHHHHHHhccCcEEEEeC--C-----C------eEEEEECCEEEEEEeCCCCCc-CCCCCce
Confidence            3578999999999  999999999999999987652  2     1      677788888888765432110 1223456


Q ss_pred             EEEEEEeCCHHHHHHHHH----HCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          101 CVLCLETEDVEAAVAKAV----SAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~----~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      ++++|.|+|+++++++++    +.|+++..+|...+|   |.+.++|+||+||.|+|.+....
T Consensus        68 ~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           68 VAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPY---GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTT---SEEEEEEECTTSCEEEEEEECCT
T ss_pred             EEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCC---CcEEEEEECCCCCEEEEEEcccc
Confidence            899999999999999998    456778889999999   99999999999999999997744

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.83  E-value=1.9e-19  Score=126.60  Aligned_cols=119  Identities=15%  Similarity=0.215  Sum_probs=87.5

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEE-ECCeEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLE-IAGSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~-~g~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |...+.++.+.+.|+++|++||++ |||++..... +    .+     .+..+. .++..|.+....+.   ....+.++
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~----~~-----~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~   68 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-D----KG-----SEVHRAVHNGVEFSLYSIQNP---QRSQIPSL   68 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC---------------CCEEEEEETTEEEEEEECCCC---SSCCCCSE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-C----CC-----CEEEEEeCCCeEEEEEECCCC---cCCCCCce
Confidence            555667777777799999999999 9999865411 1    11     145555 57777777544321   12345678


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCe-EEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118          102 VLCLETEDVEAAVAKAVSAGAV-AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~~G~~-i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      +++|.|+|+++++++++++|++ ++.+|...+|   |.+ ++|+||+||+|+|.+....
T Consensus        69 ~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~---G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           69 QLGFQITDLEKTVQELVKIPGAMCILDPTDMPD---GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             EEEEEESCHHHHHHHHTTSTTCEEEEEEEECC----CEE-EEEECTTCCEEEEEC----
T ss_pred             EEEEEeCCHHHHHHHHHHCCCceeccCceeCCC---ccE-EEEECCCCCEEEEEEeccc
Confidence            9999999999999999999999 8889999999   977 9999999999999986643

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.82  E-value=4.1e-19  Score=123.67  Aligned_cols=112  Identities=21%  Similarity=0.221  Sum_probs=89.9

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      ++.+.+.|.|+  |++++++||+++||+++...   .    .+      ++.+..++..|.+.....     ...+.+.|
T Consensus         4 ~~~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~---~----~~------~~~~~~~~~~l~l~~~~~-----~~~~~~~~   63 (124)
T 1xrk_A            4 LTSAVPVLTAR--DVAEAVEFWTDRLGFSRVFV---E----DD------FAGVVRDDVTLFISAVQD-----QVVPDNTQ   63 (124)
T ss_dssp             EEEEEEEEEES--CHHHHHHHHHHTTCCEEEEE---C----SS------EEEEEETTEEEEEEECSC-----TTTGGGCE
T ss_pred             ccceeEEEEcC--CHHHHHHHHHHccCceEEec---C----CC------EEEEEECCEEEEEEcCCC-----CCCCCceE
Confidence            45667777777  99999999999999998754   1    12      566777887777755321     12345579


Q ss_pred             EEEEeCCHHHHHHHHHHC------CC--eEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          103 LCLETEDVEAAVAKAVSA------GA--VAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~------G~--~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      ++|.|+|+++++++++++      |+  +++.+|...+|   | +.++|+||+||+|+|+++..
T Consensus        64 ~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~---g-~~~~~~DPdG~~iel~~~~~  123 (124)
T 1xrk_A           64 AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW---G-REFALRDPAGNCVHFVAEEQ  123 (124)
T ss_dssp             EEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETT---E-EEEEEECTTCCEEEEEEC--
T ss_pred             EEEEECCHHHHHHHHHHhcccccCCccccccCCceecCC---C-CEEEEECCCCCEEEEEEecC
Confidence            999999999999999999      99  89999999999   9 99999999999999998653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.82  E-value=2.9e-19  Score=129.25  Aligned_cols=126  Identities=11%  Similarity=0.070  Sum_probs=86.8

Q ss_pred             CCCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEecCC-CCCcc
Q 031118           19 TAASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSDVS-GDSAA   93 (165)
Q Consensus        19 ~~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d~~-~~~~~   93 (165)
                      +.+.|+--.+.|.|+  |+++|++||+++|||++..+...+.         ..+..+.. ++   ..+.+.... +...+
T Consensus        21 ~~~~Mri~~v~I~V~--Dle~A~~FY~dvLGf~v~~d~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   89 (155)
T 4g6x_A           21 QSNAMRIHLTNVFVD--DQAKAESFYTGKLGFLVKADVPVGA---------DRWLTVVSPEAPDGTQLLLEPSSHAAVTP   89 (155)
T ss_dssp             --CCCCCCEEEEEES--CHHHHHHHHHHTTCCEEEEEEEETT---------EEEEEEECTTCTTSCEEEEEECCSTTHHH
T ss_pred             ccCceEEEEEEEEeC--CHHHHHHHHHHHhCCEEEEeecCCC---------ceEEEEeccCCCcceEEEeccCCCccccc
Confidence            356688777888888  9999999999999999876643221         11222222 11   222222221 11000


Q ss_pred             ---cccCCccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           94 ---AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        94 ---~~~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                         ....+...+++|.|+|+++++++++++|+++..+|.+.+|   | +.++|+|||||+|+|.|...+
T Consensus        90 ~~~~~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~---g-~~~~f~DPdGn~iel~q~~~d  154 (155)
T 4g6x_A           90 FKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP---V-VTAILDDTCGNLIQLMQIAYD  154 (155)
T ss_dssp             HHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSS---C-EEEEEECSSSCEEEEEEC---
T ss_pred             cccccccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCC---e-EEEEEECCCCCEEEEEEECCC
Confidence               1112334589999999999999999999999999999988   8 889999999999999987643

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.82  E-value=3.1e-19  Score=123.98  Aligned_cols=110  Identities=21%  Similarity=0.203  Sum_probs=90.3

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      ++.+.+.|.++  |+++|++||+++||+++...   .    ++      ++.+..++..|.+.....     ...+.+.|
T Consensus         4 ~~~~~~~l~v~--D~~~a~~FY~~~LG~~~~~~---~----~~------~~~~~~~~~~l~l~~~~~-----~~~~~~~~   63 (122)
T 1qto_A            4 FLGAVPVLTAV--DVPANVSFWVDTLGFEKDFG---D----RD------FAGVRRGDIRLHISRTEH-----QIVADNTS   63 (122)
T ss_dssp             CCCCCCEEEES--SHHHHHHHHHHTTCCEEEEE---C----SS------EEEEEETTEEEEEEECSC-----HHHHTTCE
T ss_pred             ccceeEEEEcC--CHHHHHHHHHhccCcEEeeC---C----CC------EEEEEECCEEEEEEcCCC-----CCCCCceE
Confidence            45677888888  99999999999999998754   1    12      666777888888765321     11234579


Q ss_pred             EEEEeCCHHHHHHHHHHC------CC--eEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETEDVEAAVAKAVSA------GA--VAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~------G~--~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|+++++++++++      |+  ++..+|...+|   | +.++|+||+||.|+|+++
T Consensus        64 ~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~---g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           64 AWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPA---G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETT---E-EEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCC---C-cEEEEECCCCCEEEEecC
Confidence            999999999999999999      99  89989988889   9 999999999999999875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.82  E-value=5.9e-19  Score=121.35  Aligned_cols=114  Identities=13%  Similarity=0.128  Sum_probs=88.3

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      |+-.++.|.|+  |++++++||+++||+++....       ++      ++.+..++..|++.....  .+....+.+++
T Consensus         4 m~i~~v~l~v~--D~~~a~~FY~~~lG~~~~~~~-------~~------~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~   66 (118)
T 2i7r_A            4 MNLNQLDIIVS--NVPQVCADLEHILDKKADYAN-------DG------FAQFTIGSHCLMLSQNHL--VPLENFQSGII   66 (118)
T ss_dssp             CEEEEEEEECS--CHHHHHHHHHHHHTSCCSEEE-------TT------EEEEEETTEEEEEESSCS--SSCCCCCSCEE
T ss_pred             ceeeEEEEEeC--CHHHHHHHHHHHhCCeeEEeC-------CC------EEEEEeCCeEEEEEcCCC--CCcccCCCeEE
Confidence            44344555555  999999999999999886431       11      666777877776643221  11123356679


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|++++++++.++|++++.+|...+|   |.+.++|+||+||.|+|++.
T Consensus        67 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           67 IHIEVEDVDQNYKRLNELGIKVLHGPTVTDW---GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             EEEECSCHHHHHHHHHHHTCCEEEEEEECTT---SCEEEEEECGGGCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHCCCceecCCccccC---ccEEEEEECCCccEEEEEec
Confidence            9999999999999999999999999998889   98999999999999999874

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.81  E-value=2.6e-18  Score=119.53  Aligned_cols=121  Identities=14%  Similarity=0.140  Sum_probs=90.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCcc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      |..-..++.+.+.|++++++||+++||+++......+.    +    ..+..+..++  ..|.+...... ......+..
T Consensus        10 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~----~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~   80 (133)
T 4hc5_A           10 MIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP----N----MRFVTVVPPGAQTQVALGLPSWY-EDGRKPGGY   80 (133)
T ss_dssp             SCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET----T----EEEEEEECTTCSCEEEEECGGGC-SSCCCSCEE
T ss_pred             cccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC----C----ceEEEEECCCCceEEEEecCccc-ccccCCCCe
Confidence            33344555555569999999999999999987643221    1    3466666533  45666543210 001223455


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          101 CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .|++|.|+|+++++++++++|+++..+|...+|   |.+.++|+||+||.|+|++
T Consensus        81 ~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           81 TGISLITRDIDEAYKTLTERGVTFTKPPEMMPW---GQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEESSSCEECTT---SCEEEEEECTTCEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCC---CCEEEEEECCCCCEEEEEe
Confidence            799999999999999999999999999999999   9899999999999999986

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.81  E-value=2.6e-18  Score=119.78  Aligned_cols=112  Identities=15%  Similarity=0.137  Sum_probs=90.0

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      +++.+.|.|+  |+++|++||++ ||+++...   .    .+      ++.+..++..|.+..... .   ...+...|+
T Consensus         3 ~~~~~~l~v~--D~~~a~~FY~~-LG~~~~~~---~----~~------~~~~~~~~~~l~l~~~~~-~---~~~~~~~~~   62 (126)
T 1ecs_A            3 DQATPNLPSR--DFDSTAAFYER-LGFGIVFR---D----AG------WMILQRGDLMLEFFAHPG-L---DPLASWFSC   62 (126)
T ss_dssp             CEEEEEEEES--CHHHHHHHHHT-TTCEEEEE---C----SS------EEEEEETTEEEEEEECTT-C---CGGGCCCEE
T ss_pred             ccEEEEEEeC--CHHHHHHHHHH-CCCEEEec---C----CC------EEEEEeCCEEEEEEeCCC-C---CCCCcceEE
Confidence            4677888888  99999999998 99998754   1    11      667777887777654321 1   122456799


Q ss_pred             EEEeCCHHHHHHHHHHCCCe-------EEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          104 CLETEDVEAAVAKAVSAGAV-------AEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~-------i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +|.|+|+++++++++++|++       +..+|...+|   |.+.++|+||+||.|+|+++..
T Consensus        63 ~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           63 CLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGW---GGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTT---SSEEEEEECTTSCEEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCccccccCccccCCcccCc---ccEEEEEECCCCCEEEEecchh
Confidence            99999999999999999999       4788888889   9899999999999999998754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.80  E-value=2.4e-18  Score=122.70  Aligned_cols=123  Identities=14%  Similarity=0.206  Sum_probs=89.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC--CC-C---ccccc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS--GD-S---AAAQT   96 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~--~~-~---~~~~~   96 (165)
                      ++++.+.|.|+  |+++|++||+++|||++......     .+      ++.+..++..|.|....  +. .   .....
T Consensus         4 ~~~~~~~l~v~--Dl~~s~~FY~~~LG~~~~~~~~~-----~~------~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~   70 (145)
T 2rk9_A            4 TLRVVPELYCF--DINVSQSFFVDVLGFEVKYERPD-----EE------FVYLTLDGVDVMLEGIAGKSRKWLSGDLEFP   70 (145)
T ss_dssp             CCCEEEEEEES--SHHHHHHHHHHTTCCEEEEEEGG-----GT------EEEEEETTEEEEEEEC-----------CCSS
T ss_pred             cccceEEEEEC--CHHHHHHHHHhccCCEEEeecCC-----CC------EEEEEcCCeEEEEEeccCCCcccccCccccC
Confidence            56788999998  99999999999999998753211     11      56677788777765431  11 0   00122


Q ss_pred             CCccEEEEEEeCCHHHHHHHHHH-CCCeEEecCcccccc----cCCceEEEEEcCCCCeEEEEeeec
Q 031118           97 VGTGCVLCLETEDVEAAVAKAVS-AGAVAEGELAEGNGA----CCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        97 ~~~~~~i~~~V~dv~~~~~~~~~-~G~~i~~~p~~~~~~----~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .+.+++++|.|+|++++++++++ +|++++.+|...+|.    ..|.+.++|+||+||+|+|++...
T Consensus        71 ~~~g~~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           71 LGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             TTTTEEEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             CCCceEEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            34567799999999999999999 999999888763330    004589999999999999998653

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.80  E-value=8.2e-18  Score=117.40  Aligned_cols=126  Identities=18%  Similarity=0.227  Sum_probs=86.9

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVG   98 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~   98 (165)
                      |+-.++.|.|+  |++++++||+++||+++......+.    +   ....+.+..++    ..|.+.......  ....+
T Consensus         1 m~l~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~   69 (135)
T 1f9z_A            1 MRLLHTMLRVG--DLQRSIDFYTKVLGMKLLRTSENPE----Y---KYSLAFVGYGPETEEAVIELTYNWGVD--KYELG   69 (135)
T ss_dssp             CCEEEEEEECS--CHHHHHHHHHHTTCCEEEEEEEETT----T---TEEEEEEESSCTTTSCEEEEEEETTCC--CCCCC
T ss_pred             CcceEEEEEeC--CHHHHHHHHHhccCcEEEEecccCC----C---ceEEEEEecCCCCCCcEEEEEEcCCCC--cccCC
Confidence            34445555565  9999999999999999876643231    1   12344455543    566664322110  11223


Q ss_pred             cc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCc-eEEEEEcCCCCeEEEEeeecccCC
Q 031118           99 TG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGE-RVGKVKDPYGFTWLICSPVKKCAG  162 (165)
Q Consensus        99 ~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~-~~~~~~DP~G~~~~l~~~~~~~~~  162 (165)
                      .+ .|++|.|+|+++++++++++|+++..+|...+|   |. +.++|+||+||.|+|++.....++
T Consensus        70 ~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~DPdG~~iel~~~~~~~~~  132 (135)
T 1f9z_A           70 TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKG---GTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTT---SCCEEEEEECTTSCEEEEEEC------
T ss_pred             CCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCC---CceeEEEEECCCCCEEEEEecCCCCCC
Confidence            34 489999999999999999999999999888888   76 688999999999999998766554

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.79  E-value=2.8e-18  Score=121.64  Aligned_cols=122  Identities=17%  Similarity=0.122  Sum_probs=88.2

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecC-----CCCCccccc
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV-----SGDSAAAQT   96 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~-----~~~~~~~~~   96 (165)
                      +|. -..++.+.+.|++++++||+++||+++.....      .+     .+..+..++..|.+...     .....+...
T Consensus         5 ~M~-~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~-----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   72 (141)
T 2rbb_A            5 NMA-DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR------SP-----IFRGLDTGKSCIGFNAHEAYELMQLAQFSET   72 (141)
T ss_dssp             CCC-EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC------BT-----TEEEEECSSSEEEEECTHHHHHTTCGGGCCC
T ss_pred             HcC-cccEEEEEECCHHHHHHHHHHhcCCeeecccC------CC-----ceEEeecCCEEEEEcCccccccccccccCCC
Confidence            364 33445555559999999999999998753321      11     15566667777766432     110011122


Q ss_pred             CCccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           97 VGTGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        97 ~~~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .+.+++++|.|+|   +++++++++++|++++.+|...+|   |.+.++|+||+||.|+|++...
T Consensus        73 ~~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           73 SGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY---HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             BSCCEEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTT---SEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCCeEEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCC---ccEEEEEECCCCCEEEEEEccc
Confidence            3456799999994   999999999999999999988888   8899999999999999998754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.79  E-value=4.6e-18  Score=125.16  Aligned_cols=117  Identities=15%  Similarity=0.195  Sum_probs=89.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhh-CCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAF-GAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vl-G~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |.+++|+|.+.+ |+++|++||+++| |.++.....+++.......++++|+.|++++..|++.|..|.    .....++
T Consensus         4 M~~i~PyL~f~g-~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p~----~~~~~~~   78 (163)
T 1u69_A            4 NSKNTICLWYDS-AALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA----FRHSEAF   78 (163)
T ss_dssp             -CCEEEEEEESS-CHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT----CCCCTTE
T ss_pred             CCceeEEEEECC-CHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCCC----cCCCCce
Confidence            678999999985 9999999999999 999875443332100111247999999999999999887553    2345778


Q ss_pred             EEEEEeCCHHH---HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETEDVEA---AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +|+|.|+|.++   .++++.++|++++             ++++|+||||+.|+|..+.
T Consensus        79 sl~v~~~d~~e~d~~~~~L~~~Gg~v~-------------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           79 SFQVATDDQAETDRLWNAIVDNGGEES-------------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCEEC-------------STTEEECTTSCEEEEEEHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCEEE-------------EEEEEECCCCCEEEEEeEc
Confidence            99999998544   4677666899887             2348999999999999865

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.79  E-value=1.1e-18  Score=125.42  Aligned_cols=119  Identities=13%  Similarity=0.036  Sum_probs=86.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      ++.+.+.|.|+  |++++++||+++||+++..+...+.    .   .  +.....++..++..+ ..    ........+
T Consensus         5 i~~i~i~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~----~---~--~~~~~~~~~~l~~~~-~~----~~~~~~~~h   68 (144)
T 3r6a_A            5 ILQILSRLYVA--DLNPALEFYEELLETPVAMRFEIPQ----T---G--VELAQISTILLIAGS-EE----ALKPFRNTQ   68 (144)
T ss_dssp             EEEEEEEEEES--CHHHHHHHHHHHTTCCCCEECCCSC----S---S--CEEEEETTEEEEESC-HH----HHGGGGGCC
T ss_pred             EEEEEEEEEEC--CHHHHHHHHHHhcCCEEEEEeccCC----c---c--EEEEEeccEEEecCC-cc----cCCCCcceE
Confidence            45667777777  9999999999999999876543221    1   1  122234553333221 10    112234579


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecccC
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCA  161 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~~  161 (165)
                      ++|.|+|+++++++++++|+++..+|...+|   | +.++|+||+||.|+|+++....+
T Consensus        69 l~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~---G-~~~~~~DPdG~~iel~~~~~~~a  123 (144)
T 3r6a_A           69 ATFLVDSLDKFKTFLEENGAEIIRGPSKVPT---G-RNMTVRHSDGSVIEYVEHSKIEA  123 (144)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEEEEEEEEETT---E-EEEEEECTTSCEEEEEEECC---
T ss_pred             EEEEeCCHHHHHHHHHHcCCEEecCCccCCC---c-eEEEEECCCCCEEEEEEcCCcch
Confidence            9999999999999999999999999999888   8 89999999999999999876544

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.78  E-value=6.2e-18  Score=116.84  Aligned_cols=122  Identities=18%  Similarity=0.140  Sum_probs=87.0

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCCCCCcccccCCc-
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVSGDSAAAQTVGT-   99 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~~~~~~~~~~~~-   99 (165)
                      ||+--+..|.|+  |++++++||+++||+++......+.   .+    .....+.. ++..|.+.........+...+. 
T Consensus         1 gm~i~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~---~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g   71 (127)
T 3e5d_A            1 GMKIEHVALWTT--NLEQMKQFYVTYFGATANDLYENKT---KG----FNSYFLSFEDGARLEIMSRTDVTGKTTGENLG   71 (127)
T ss_dssp             -CCCCEEEEECS--SHHHHHHHHHHHHCCEECCCEEEGG---GT----EEEEEEECSSSCEEEEEEETTCCCCCCSSCSS
T ss_pred             CCEEEEEEEEEC--CHHHHHHHHHHhcCCeeecccccCC---CC----ccEEEEEcCCCcEEEEEecCCCCCCCCcCCCc
Confidence            466666777777  9999999999999999865533221   11    22333444 3456665433211110111333 


Q ss_pred             cEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          100 GCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       100 ~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ..|++|.|+|   +++++++++++|+++..+|...++   |.+.++|+||+||.|+|++
T Consensus        72 ~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           72 WAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGD---GYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             CCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTT---SCEEEEEECTTSCEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCC---CcEEEEEECCCCCEEEEeC
Confidence            3699999999   789999999999999999988888   8899999999999999974

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.78  E-value=2.3e-17  Score=114.30  Aligned_cols=117  Identities=15%  Similarity=0.123  Sum_probs=87.0

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecC-------C-CCCcc-cc-cCC
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV-------S-GDSAA-AQ-TVG   98 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~-------~-~~~~~-~~-~~~   98 (165)
                      ++.+.+.|++++++||+++||+++......++    +   ...+..+..++..|.+...       . +...+ .. ..+
T Consensus         8 hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            8 HVALIVSDYDKSYEFYVNQLGFEVIRENHRPK----R---HDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             EEEEECSCHHHHHHHHHHTSCCEEEEEEEETT----T---TEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEEeecCC----C---cceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            44455559999999999999999987653331    1   2345667778877766551       1 11010 11 223


Q ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           99 TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        99 ~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ...|++|.|+|+++++++++++|+++..+|...++   |.+.++|+||+||.|+|++
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYT---GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTS---CCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCC---ceEEEEEECCCCCEEEEeC
Confidence            34599999999999999999999999888877778   8899999999999999985

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.78  E-value=4e-18  Score=122.82  Aligned_cols=115  Identities=15%  Similarity=0.102  Sum_probs=83.9

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecCCCCCcccccCCccEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ...|.|+  |+++|++||+++||+++....  +     +      ++.+.. ++..|.+.............+...+++|
T Consensus         9 hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~--~-----~------~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            9 LVLFYVK--NPAKSEEFYKNLLDTQPIESS--P-----T------FAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHTCCCSEEC--S-----S------EEEEECTTSCEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             EEEEEeC--CHHHHHHHHHHHcCCEEeccC--C-----C------EEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEE
Confidence            3444555  999999999999999886542  1     1      666776 5666666432110000123455789999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeeccc
Q 031118          106 ETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKC  160 (165)
Q Consensus       106 ~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~  160 (165)
                      .|+|   +++++++++++|++++.+|...+|   | +.++|+||+||+|+|+++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~---G-~~~~~~DPdG~~iel~~~~~~a  127 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDF---G-YTFVGVDPDEHRLRIFCLKRTA  127 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETT---E-EEEEEECTTCCEEEEEEEC---
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCC---C-cEEEEECCCCCEEEEEEcChhH
Confidence            9987   999999999999999999999999   8 9999999999999999987554

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.78  E-value=2.2e-18  Score=118.30  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=83.5

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC---CeEEEEecCCCCCcccccCC
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA---GSTFLVSDVSGDSAAAQTVG   98 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g---~~~l~l~d~~~~~~~~~~~~   98 (165)
                      .|+.+.+.|.++  |++++++||+++||+++...   +     +   .  +..+..+   +..|.+....      ...+
T Consensus         5 ~i~~i~v~l~v~--d~~~a~~FY~~~lG~~~~~~---~-----~---~--~~~~~~~~~~~~~l~l~~~~------~~~~   63 (119)
T 2pjs_A            5 AVRRVVANIATP--EPARAQAFYGDILGMPVAMD---H-----G---W--IVTHASPLEAHAQVSFAREG------GSGT   63 (119)
T ss_dssp             CEEEEEEEEECS--CGGGGHHHHTTTTCCCEEEE---C-----S---S--EEEEEEEEEEEEEEEEESSS------BTTB
T ss_pred             ceeEEEEEEEcC--CHHHHHHHHHHhcCCEEEec---C-----C---E--EEEEecCCCCcEEEEEEcCC------CCCC
Confidence            355565555555  99999999999999998653   1     1   1  2233333   2345554321      1123


Q ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           99 TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        99 ~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ...|++|.|+|++++++++.++|+++..+|.+.+|   |.+.++|+||+||.|+|+++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW---GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTT---SCEEEEEECTTSCEEEEEEC
T ss_pred             ceeEEEEEECCHHHHHHHHHHCCCccccCCccCCC---ccEEEEEECCCCCEEEEEec
Confidence            45689999999999999999999999999988888   88999999999999999975

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.77  E-value=4.3e-17  Score=113.25  Aligned_cols=115  Identities=15%  Similarity=0.162  Sum_probs=84.7

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc--cccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA--AQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~--~~~~~~~~~i~~  105 (165)
                      ..|.|+  |++++++||+++||+++....       .+      +..+..++..|.+........+  ........|++|
T Consensus        14 i~l~v~--D~~~a~~FY~~~lG~~~~~~~-------~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
T 3ey7_A           14 LVLTVA--DIPTTTNFYEKVLGMKAVSFG-------AG------RIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCF   78 (133)
T ss_dssp             EEEEES--CHHHHHHHHHHHHCCEEEEET-------TT------EEEEEETTEEEEEEETTSCCSSCCTTCCTTCCEEEE
T ss_pred             EEEEEC--CHHHHHHHHHHccCceEEEec-------CC------eEEEEcCCEEEEEEcCCCCccccCCCCCCCccEEEE
Confidence            445555  999999999999999987652       11      5566778877776544322111  123344579999


Q ss_pred             EeCC-HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETED-VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~d-v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+| +++++++++++|+++..+|...++..++.+.++|+||+||.|+|+++.
T Consensus        79 ~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           79 ITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            9997 999999999999999988876654000238999999999999999875

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.76  E-value=1e-17  Score=120.52  Aligned_cols=121  Identities=16%  Similarity=0.103  Sum_probs=85.6

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CCC--cc-cccC
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GDS--AA-AQTV   97 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~~--~~-~~~~   97 (165)
                      +|..-..++.+.+.|++++++||+++||+++...   +.    +.     ++.+..++..+.|.... +..  .. ....
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~----~~-----~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~   88 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PD----MD-----YSMVTTGPVGESGMPDEPGYINGGMMQRGE   88 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TT----TT-----EEEEECSCBCTTSSBCSSSCBCEEEEESSS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CC----CC-----EEEEEeCCcceeecccCCcccccceeecCC
Confidence            5764444555555599999999999999998753   21    11     55666666432221111 000  00 0111


Q ss_pred             CccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccc-cccCCceEEEEEcCCCCeEEEEeeec
Q 031118           98 GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGN-GACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        98 ~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~-~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      ..+++++|.|+|+++++++++++|++++.+|.+.+ |   | +.++|+||+||.|+|+++..
T Consensus        89 ~~g~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~---g-~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           89 VTTPVVTVDVESIESALERIESLGGKTVTGRTPVGNM---G-FAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             SCSCEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTT---E-EEEEEECTTSCEEEEEEECC
T ss_pred             CCeEEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCC---E-EEEEEECCCCCEEEEEecCC
Confidence            24579999999999999999999999999888777 7   7 89999999999999998764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.75  E-value=4.3e-17  Score=114.39  Aligned_cols=112  Identities=13%  Similarity=0.123  Sum_probs=85.6

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCCCCcccccCCccEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +.-.+.|.|+  |++++++||+++||+++....  +     .      ++.+..+ +..|.+......  .....+...|
T Consensus        13 ~i~~v~l~v~--D~~~s~~FY~~~lG~~~~~~~--~-----~------~~~~~~~~~~~l~l~~~~~~--~~~~~~~~~~   75 (132)
T 3sk2_A           13 TPNLQLVYVS--NVERSTDFYRFIFKKEPVFVT--P-----R------YVAFPSSGDALFAIWSGGEE--PVAEIPRFSE   75 (132)
T ss_dssp             CCCEEEEECS--CHHHHHHHHHHHHTCCCSEEC--S-----S------EEEEECSTTCEEEEESSSCC--CCTTSCCCEE
T ss_pred             eeeEEEEEEC--CHHHHHHHHHHHcCCeEEEcC--C-----C------EEEEEcCCCcEEEEEeCCCC--CcCCCCCcce
Confidence            3345566666  999999999999999876542  1     1      4555544 467776554311  0123445678


Q ss_pred             EEEEeCC---HHHHHHHHHH---CCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETED---VEAAVAKAVS---AGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~---~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.|+|   ++++++++++   +|+++..+|...+|   | +.++|+||+||+|+|+++
T Consensus        76 ~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~---g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           76 IGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVF---G-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             EEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETT---E-EEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCc---e-EEEEEECCCCCEEEEEeC
Confidence            9999987   9999999999   99999999999999   9 999999999999999975

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.75  E-value=4.5e-17  Score=112.81  Aligned_cols=123  Identities=19%  Similarity=0.213  Sum_probs=87.8

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc-----c-cc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA-----A-QT   96 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~-----~-~~   96 (165)
                      |..-..++.+.+.|++++++||+++||+++......+.    .   ...+..+..++..|.+........+     . ..
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   74 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPE----H---GVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNK   74 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGG----G---TEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCT
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCC----C---CEEEEEEecCCEEEEEEecCCCCchhhhhhhccC
Confidence            55556677777779999999999999999875543221    1   1345666777777765433211111     0 12


Q ss_pred             CCccEEEEEEeCCHHHHHHHHHHCCCeEEecC-cccccccCCceEEEE--EcCCCCeEEEEe
Q 031118           97 VGTGCVLCLETEDVEAAVAKAVSAGAVAEGEL-AEGNGACCGERVGKV--KDPYGFTWLICS  155 (165)
Q Consensus        97 ~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p-~~~~~~~~G~~~~~~--~DP~G~~~~l~~  155 (165)
                      .+...|++|.|+|+++++++++++|++++.++ ....+   |.+..++  +||+||.|+|++
T Consensus        75 ~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~---g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           75 AGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAH---GKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             TCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTT---SSEEEEECSCSSCCSCEEEEE
T ss_pred             CCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCC---CceEEEEecCCCCcEEEEEEc
Confidence            23446999999999999999999999988764 44455   7677777  899999999987

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.75  E-value=3.7e-17  Score=112.42  Aligned_cols=117  Identities=12%  Similarity=0.090  Sum_probs=84.3

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CCCccccc-CCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GDSAAAQT-VGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~~~~~~~-~~~~~~i~  104 (165)
                      ...|.|+  |++++++||+++||+++......++   .+    .....+..++..|.+.... +...+... .....|++
T Consensus         8 hi~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~---~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            8 HVAINAS--NYQATKNFYVEKLGFEVLRENHRPE---KN----DIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             CEEEEES--CHHHHHHHHTTTTCCEEEEEEEEGG---GT----EEEEEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             eEEEEeC--CHHHHHHHHHHhcCCEEEeeccCCC---Cc----ceEEEEecCCeEEEEEeccCCCCCCCCCCCccceEEE
Confidence            4455566  9999999999999999876532221   11    1234467777777665432 11111111 22334899


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |.|+|+++++++++++|+++..+|...++   |.+.++|+||+||+|+|++
T Consensus        79 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFLNEQGIETEPLRVDDFT---GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHHHHTTCCCCCCEECTTT---CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCC---CcEEEEEECCCCCEEEeeC
Confidence            99999999999999999998877776777   8899999999999999975

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.75  E-value=4.5e-17  Score=113.77  Aligned_cols=122  Identities=11%  Similarity=0.100  Sum_probs=86.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEe-ecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc----cccC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRS-VETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA----AQTV   97 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~-~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~----~~~~   97 (165)
                      |..-..++.+.+.|+++|++||+ +||+++.... ..+.    .   ....+.+..++..|.+........+    ... 
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~----~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~-   74 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEV----R---KVYIQFVINGGYRVELVAPDGEDSPINKTIKK-   74 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETT----T---TEEEEEEEETTEEEEEEEESSTTCTHHHHTTT-
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCC----c---ceEEEEEeCCCEEEEEEecCCCCChHHHHHhc-
Confidence            43334555555559999999999 9999986442 1121    1   2345556667777776543221111    112 


Q ss_pred             CccE-EEEEEeCCHHHHHHHHHHCCCeEEecCc--ccccccCCceEEEEEcCCCCeEEEEee
Q 031118           98 GTGC-VLCLETEDVEAAVAKAVSAGAVAEGELA--EGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        98 ~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~--~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +.++ ||+|.|+|+++++++++++|++++.+|.  ...+   |.+.+|++||+||+|+|++.
T Consensus        75 ~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~---g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           75 GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAID---NRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGT---TEEEEEEEETTTEEEEEEEC
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCC---CceEEEEECCCceEEEEecC
Confidence            5566 9999999999999999999999988654  3456   88999999999999999873

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.74  E-value=2.7e-17  Score=116.12  Aligned_cols=114  Identities=21%  Similarity=0.256  Sum_probs=86.1

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CCeEEEEecC------CCCCcccccCC
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AGSTFLVSDV------SGDSAAAQTVG   98 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~~~l~l~d~------~~~~~~~~~~~   98 (165)
                      ..+.|.|+  |++++++||++ ||+++....  +    .+     .+..+.. ++..|.+...      .+... ....+
T Consensus         6 ~hv~l~v~--D~~~a~~FY~~-LG~~~~~~~--~----~~-----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~~~~   70 (138)
T 2a4x_A            6 SLFAVVVE--DMAKSLEFYRK-LGVEIPAEA--D----SA-----PHTEAVLDGGIRLAWDTVETVRSYDPEWQ-APTGG   70 (138)
T ss_dssp             EEEEEEES--CHHHHHHHHHT-TTCCCCGGG--G----GC-----SEEEEECTTSCEEEEEEHHHHHHHCTTCC-CCBSS
T ss_pred             eEEEEEEC--CHHHHHHHHHH-cCCcEEecC--C----CC-----ceEEEEcCCCeEEEEecCccchhhCcccC-CCCCC
Confidence            45556666  99999999998 999875432  1    11     2666666 5566766542      11110 12234


Q ss_pred             ccEEEEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           99 TGCVLCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        99 ~~~~i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ...+++|.|+   |+++++++++++|++++.+|...+|   |.+.++|+||+||.|+|++..
T Consensus        71 ~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           71 HRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW---GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             CSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETT---TEEEEEEECTTCCEEEEEEEC
T ss_pred             CeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCC---CcEEEEEECCCCCEEEEEeCC
Confidence            5679999999   9999999999999999999998889   989999999999999999876

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.73  E-value=2.6e-17  Score=118.07  Aligned_cols=113  Identities=20%  Similarity=0.238  Sum_probs=85.9

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC---CCc-ccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG---DSA-AAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~---~~~-~~~~~~~~~~  102 (165)
                      .+.|.|+  |+++|++||+++||+++....  +     .      ++.+..++..|.+.....   ... +........+
T Consensus         8 hv~l~v~--D~~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~   72 (150)
T 3bqx_A            8 VITLGIG--DLEASARFYGEGFGWAPVFRN--P-----E------IIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMA   72 (150)
T ss_dssp             EEEEEES--CHHHHHHHHHHTSCCCCSEEC--S-----S------EEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCE
T ss_pred             EEEEEcC--CHHHHHHHHHHhcCCEeecCC--C-----C------EEEEEcCCEEEEEEeccccccccCCCCCCCCCeEE
Confidence            4455555  999999999999999876542  1     1      556666777777654310   000 0112345679


Q ss_pred             EEEEe---CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLET---EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V---~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|   +|+++++++++++|++++.+|...+|   |.+.++|+||+||+|+|++..
T Consensus        73 l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           73 LAHNVRAETEVAPLMERLVAAGGQLLRPADAPPH---GGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTT---SSEEEEEECTTCCEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCC---CCEEEEEECCCCCEEEEEeCC
Confidence            99999   89999999999999999999988888   889999999999999999764

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.73  E-value=8.7e-17  Score=116.78  Aligned_cols=127  Identities=16%  Similarity=0.254  Sum_probs=92.5

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc----cccCCccE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA----AQTVGTGC  101 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~----~~~~~~~~  101 (165)
                      -..++.+.+.|+++|++||+++||+++......+.    +   ....+.+..++..|.+........+    ....+.++
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~----~---~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~   80 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPS----Q---GVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGI   80 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGG----G---TEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEE
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCC----C---CeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCe
Confidence            34556666669999999999999999877643331    1   2346667778877766543221110    01223444


Q ss_pred             -EEEEEeCCHHHHHHHHHHCCCeEEec-CcccccccCCceEEEE--EcCCCCeEEEEeeecccCC
Q 031118          102 -VLCLETEDVEAAVAKAVSAGAVAEGE-LAEGNGACCGERVGKV--KDPYGFTWLICSPVKKCAG  162 (165)
Q Consensus       102 -~i~~~V~dv~~~~~~~~~~G~~i~~~-p~~~~~~~~G~~~~~~--~DP~G~~~~l~~~~~~~~~  162 (165)
                       ||+|.|+|+++++++++++|++++.+ |...++   |.+++++  +||+||.|+|+++...+..
T Consensus        81 ~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~---g~~~~f~~~~DPdG~~iEl~~~~~~~~~  142 (161)
T 3oa4_A           81 HHIAIGVKSIEERIQEVKENGVQMINDEPVPGAR---GAQVAFLHPRSARGVLYEFCEKKEQAEN  142 (161)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGG---GCEEEEBCGGGTTTCCEEEEECCCCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEecccCcccCCC---CcEEEEEeccCCCeEEEEEEecCCcccc
Confidence             79999999999999999999999887 777777   8788888  4999999999998766543

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.73  E-value=1.9e-16  Score=113.30  Aligned_cols=118  Identities=15%  Similarity=0.208  Sum_probs=84.2

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc--cccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA--AQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~--~~~~~~~~~i~  104 (165)
                      ..++.+.+.|++++++||+++||+++....       ++      +..+..++..|.+........+  ........|++
T Consensus        24 l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~-------~~------~~~l~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   90 (152)
T 3huh_A           24 IDHLVLTVSDISTTIRFYEEVLGFSAVTFK-------QN------RKALIFGAQKINLHQQEMEFEPKASRPTPGSADLC   90 (152)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEET-------TT------EEEEEETTEEEEEEETTBCCSSCCSSCCTTCCEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHhcCCCEEEEcc-------CC------eEEEEeCCeEEEEeccCCcCCCcCcCCCCCccEEE
Confidence            344555555999999999999999987651       12      5566778877766543221111  12233446899


Q ss_pred             EEeC-CHHHHHHHHHHCCCeEEecCcccccccCC---ceEEEEEcCCCCeEEEEeeeccc
Q 031118          105 LETE-DVEAAVAKAVSAGAVAEGELAEGNGACCG---ERVGKVKDPYGFTWLICSPVKKC  160 (165)
Q Consensus       105 ~~V~-dv~~~~~~~~~~G~~i~~~p~~~~~~~~G---~~~~~~~DP~G~~~~l~~~~~~~  160 (165)
                      |.+. |+++++++++++|++++.+|...++   +   .+.++|+||+||+|||++...+.
T Consensus        91 f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~---~~g~~~~~~~~DPdG~~iEl~~~~~~~  147 (152)
T 3huh_A           91 FITSTPINDVVSEILQAGISIVEGPVERTG---ATGEIMSIYIRDPDGNLIEISQYVEGH  147 (152)
T ss_dssp             EEESSCHHHHHHHHHHTTCCCSEEEEEEEE---TTEEEEEEEEECTTCCEEEEEEC----
T ss_pred             EEecCCHHHHHHHHHHCCCeEecCCccccC---CCCcEEEEEEECCCCCEEEEEecccCc
Confidence            9887 9999999999999999988876655   3   38899999999999999876543

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.73  E-value=2.5e-16  Score=111.95  Aligned_cols=127  Identities=15%  Similarity=0.191  Sum_probs=86.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCccc---ccC-CCCceEEEEEEECC--eEEEEecC-CCCC--c--cccc
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRK---AEQ-ELPLISCAQLEIAG--STFLVSDV-SGDS--A--AAQT   96 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~---~~g-~~~~v~~~~l~~g~--~~l~l~d~-~~~~--~--~~~~   96 (165)
                      .++.+.+.|++++++||++ ||+++......+...   ..+ ......++.+..++  ..|.|... .+..  .  ....
T Consensus        13 ~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~   91 (153)
T 1ss4_A           13 DNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPV   91 (153)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCCS
T ss_pred             eeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCCCC
Confidence            4455555599999999999 999987553211000   000 00123456666643  45544321 1110  0  0122


Q ss_pred             CCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           97 VGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        97 ~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .+.++ ||+|.|+|+++++++++++|++++.+|...+|   |.+.++|+||+||.|+|+++..
T Consensus        92 ~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           92 NALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN---SYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             SSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT---TEEEEEEECGGGCEEEEEEECC
T ss_pred             CCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCC---ceEEEEEECCCCCEEEEEeccC
Confidence            34556 99999999999999999999999998887778   8899999999999999998764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.72  E-value=4.8e-17  Score=116.39  Aligned_cols=117  Identities=11%  Similarity=0.085  Sum_probs=80.2

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      +..++.|.|+  |+++|++||+++||+++.......    ++      +..+   +..|.+....+...+....+.++++
T Consensus        21 ~~~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~----~~------~~~~---g~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 3bt3_A           21 RENGPVYFTK--DMDKTVKWFEEILGWSGDIVARDD----EG------FGDY---GCVFDYPSEVAVAHLTPFRGFHLFK   85 (148)
T ss_dssp             EECCCEEEES--CHHHHHHHHHHTTCCEEEEEEECT----TS------CEEE---EEEESSCTTTTSCC--CCCSEEEEE
T ss_pred             EeeeEEEEEC--CHHHHHHHHHhccCCEEEeeeecC----CC------ccEE---ccEEEEeccCCCcccccccccceee
Confidence            3355666666  999999999999999986422111    11      1112   2335441221111101112344444


Q ss_pred             --------EE-EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          104 --------CL-ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       104 --------~~-~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                              ++ .|+|+++++++++++|++++.+|...+|   |.+.++|+||+||.|+|+++..
T Consensus        86 g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~  146 (148)
T 3bt3_A           86 GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPW---GARECSITTTDGCILRFFESIQ  146 (148)
T ss_dssp             SCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETT---TEEEEEEECTTSCEEEEEEEC-
T ss_pred             ccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCC---ccEEEEEECCCCCEEEEeeecc
Confidence                    55 9999999999999999999999988889   9899999999999999998764

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.72  E-value=1.7e-16  Score=110.14  Aligned_cols=113  Identities=14%  Similarity=0.097  Sum_probs=82.0

Q ss_pred             EEEEEEec--CCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEA--PKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~--~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +.++.+.+  .|++++++||+++||+++......+.  ..+      ...+..++..|.+.....     ...+...|++
T Consensus        11 i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~--~~~------~~~~~~~~~~l~l~~~~~-----~~~~~~~~~~   77 (126)
T 2qqz_A           11 IDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK--KRG------GCWFKCGNQEIHIGVEQN-----FNPAKRAHPA   77 (126)
T ss_dssp             EEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG--GGC------CEEEEETTEEEEEEECTT-----CCCCSSSCEE
T ss_pred             eeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc--CCC------ceEEEeCCEEEEEEecCC-----CCCCCceEEE
Confidence            34444444  59999999999999999875421110  011      133566777777654321     1123457999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|+++++++++++|+++..+|.  .+   |.+.++|+||+||.|+|+++.
T Consensus        78 f~v~d~~~~~~~l~~~G~~~~~~~~--~~---g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           78 FYVLKIDEFKQELIKQGIEVIDDHA--RP---DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEETTHHHHHHHHHHTTCCCEEECS--ST---TEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCCccCCCC--CC---CeeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999988873  35   779999999999999999864

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.72  E-value=1.7e-16  Score=112.29  Aligned_cols=126  Identities=20%  Similarity=0.245  Sum_probs=87.7

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC------eEEEEecCCCCCcc---
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG------STFLVSDVSGDSAA---   93 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~------~~l~l~d~~~~~~~---   93 (165)
                      |..-..++.+.+.|++++++||+++||+++......+.    .   ...++.+..++      ..|.|........+   
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~   78 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPE----Q---GVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAK   78 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT----T---TEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHH
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCC----C---CeEEEEEEcCCCCcCcceEEEEeecCCCCChHHH
Confidence            43334455555559999999999999999876543221    1   13356667666      56666443221110   


Q ss_pred             -cccCC--cc-EEEEEEeCCHHHHHHHHHHCCCeEE-ecCcccccccCCceEEEE--EcCCCCeEEEEeeec
Q 031118           94 -AQTVG--TG-CVLCLETEDVEAAVAKAVSAGAVAE-GELAEGNGACCGERVGKV--KDPYGFTWLICSPVK  158 (165)
Q Consensus        94 -~~~~~--~~-~~i~~~V~dv~~~~~~~~~~G~~i~-~~p~~~~~~~~G~~~~~~--~DP~G~~~~l~~~~~  158 (165)
                       ....+  .+ .|++|.|+|+++++++++++|++++ .+|...++   |.+.+++  +||+||.|+|+++.+
T Consensus        79 ~~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~---g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           79 WLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTG---GNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             HHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSS---SCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             HHHhCCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCC---ceEEEEEeecCCCcEEEEEEecCC
Confidence             01122  33 5999999999999999999999988 45766677   8788888  999999999998653

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.72  E-value=1.2e-16  Score=113.79  Aligned_cols=122  Identities=17%  Similarity=0.106  Sum_probs=84.1

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCccc----ccCCCCceEEEEEEECC-eEEEEecCCCCC--c--cccc
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRK----AEQELPLISCAQLEIAG-STFLVSDVSGDS--A--AAQT   96 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~----~~g~~~~v~~~~l~~g~-~~l~l~d~~~~~--~--~~~~   96 (165)
                      -+..|.|+  |++++++||+++||+++......++..    ..+.     ++.+..++ ..|.+.......  .  +...
T Consensus        21 ~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~   93 (156)
T 3kol_A           21 HHIALNVQ--DMQASRYFYGTILGLHELTDDEVPATLTELVASGK-----VANFITPDGTILDLFGEPELSPPDPNPEKT   93 (156)
T ss_dssp             CEEEEEES--CHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTS-----EEEEECTTSCEEEEEECTTCCCSSSSTTCC
T ss_pred             eEEEEEeC--CHHHHHHHHHhhcCCEEEeecccCcchhcccCCCc-----EEEEEeCCCCEEEEEecCCCCcCCCCCCCC
Confidence            34455555  999999999999999987532111100    0111     45556654 566654432110  0  1122


Q ss_pred             CCccEEEEEEeC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           97 VGTGCVLCLETE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        97 ~~~~~~i~~~V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .....|++|.|+  |+++++++++++|++++.+|...++   | +.+||+||+||.|+|++...
T Consensus        94 ~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~---g-~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           94 FTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT---G-RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C---C-EEEEEECTTSCEEEEEECCC
T ss_pred             CCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC---c-cEEEEECCCCCEEEEEecCC
Confidence            344569999998  9999999999999999988888877   7 69999999999999998653

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.71  E-value=2.1e-16  Score=110.34  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=81.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEe
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      .++.+.+.|++++++||+++||+++....  +.    ..........+..++..|.+.....     ...+...|++|.|
T Consensus         6 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~--~~----~~~~~~~~~~~~~~~~~l~l~~~~~-----~~~~~~~h~~~~v   74 (133)
T 2p7o_A            6 SHITLIVKDLNKTTAFLQNIFNAEEIYSS--GD----KTFSLSKEKFFLIAGLWICIMEGDS-----LQERTYNHIAFQI   74 (133)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHCCEECC-----------CCCSSCEEEEEETTEEEEEEECSS-----CCCCCSCEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEeeec--CC----cccccCCceEEEeCCEEEEEecCCC-----CCCCCeeEEEEEc
Confidence            34444444999999999999999986442  11    0000000124556777676654321     1123446899999


Q ss_pred             --CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          108 --EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       108 --~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                        +|++++++++.++|+++..+|...++   +.+.++|+||+||.|+|+++.
T Consensus        75 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           75 QSEEVDEYTERIKALGVEMKPERPRVQG---EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CGGGHHHHHHHHHHHTCCEECCCCCCTT---CCCEEEEECSSSCEEEEECSS
T ss_pred             CHHHHHHHHHHHHHCCCcccCCCccCCC---CeeEEEEECCCCCEEEEEcCC
Confidence              49999999999999999988887767   779999999999999999865

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.71  E-value=9.8e-17  Score=118.67  Aligned_cols=145  Identities=17%  Similarity=0.160  Sum_probs=92.3

Q ss_pred             CchhhhhhcCCCCCCCCCC-------CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEE
Q 031118            1 MADVQEVQNGAAPEKAPAT-------AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCA   73 (165)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~-------~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~   73 (165)
                      ||.-|.+|.|..++.++..       ...|+-.++.|.|+  |++++++||+++|||++......+.    +   .....
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~----~---~~~~~   71 (184)
T 2za0_A            1 MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIK--DPKKSLDFYTRVLGLTLLQKLDFPA----M---KFSLY   71 (184)
T ss_dssp             ---CCCCCCCCCHHHHHHTCCCCCGGGTTCEEEEEEEECS--CHHHHHHHHHHTTCCEEEEEEEEGG----G---TEEEE
T ss_pred             CCCCCcccCCcchhhhhcccCCcCCCccceeEEEEEEEeC--CHHHHHHHHHHhcCCEEEEeccCCC----C---CceeE
Confidence            6667777777665432211       12244345555555  9999999999999999876543221    1   12222


Q ss_pred             EEEE-------------------CCeEEEEecCC-----CCCcc---cccCCccEEEEEEeCCHHHHHHHHHHCCCeEEe
Q 031118           74 QLEI-------------------AGSTFLVSDVS-----GDSAA---AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEG  126 (165)
Q Consensus        74 ~l~~-------------------g~~~l~l~d~~-----~~~~~---~~~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~  126 (165)
                      .+..                   ++..|.|....     +....   ........|++|.|+|+++++++++++|++++.
T Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~  151 (184)
T 2za0_A           72 FLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK  151 (184)
T ss_dssp             EEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             EecccccccCCcccchheeeecCCCceEEEEecCCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeec
Confidence            3332                   23455553221     11000   001123359999999999999999999999999


Q ss_pred             cCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          127 ELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       127 ~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +|...++   + +.+||+||+||.|+|++...
T Consensus       152 ~p~~~~~---~-~~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          152 KPDDGKM---K-GLAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             CTTSSSS---T-TCEEEECTTCCEEEEECTTT
T ss_pred             CCcCCCc---e-eEEEEECCCCCEEEEEecCc
Confidence            8887666   5 68999999999999998653

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.71  E-value=2.1e-16  Score=111.60  Aligned_cols=117  Identities=9%  Similarity=-0.004  Sum_probs=80.3

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      +.++.+.+.|++++++||+++||+++....  +......  ..  ...+..++..|.+.....     ...+...|++|.
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~--~~--~~~~~~g~~~l~l~~~~~-----~~~~~~~h~~~~   73 (139)
T 1r9c_A            5 LSHMTFIVRDLERMTRILEGVFDAREVYAS--DTEQFSL--SR--EKFFLIGDIWVAIMQGEK-----LAERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEG--GGSTTCC--SC--EEEEEETTEEEEEEECCC-----CSSCCSCEEEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCCEEeecC--CCccccc--cc--eEEEEECCEEEEEEeCCC-----CCCCCeeEEEEE
Confidence            344445455999999999999999987652  1100000  00  113456777777654321     112345689999


Q ss_pred             eC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+  |++++++++.++|+++..+|...++   +.+.++|+||+||.|+|++..
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEG---EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC--------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCC---CeEEEEEECCCCCEEEEEeCC
Confidence            99  9999999999999999988777777   779999999999999999854

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.71  E-value=4.1e-16  Score=109.23  Aligned_cols=120  Identities=11%  Similarity=-0.010  Sum_probs=81.6

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      |+--+..|.|+  |++++++||+++||+++....  +     +      +..+..++..+.+........+  ......|
T Consensus         8 ~~i~hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~g~~~~l~~~~~~~~~--~~~~~~h   70 (135)
T 3rri_A            8 NDVFHLAIPAR--DLDEAYDFYVTKLGCKLARRY--P-----D------RITLDFFGDQLVCHLSDRWDRE--VSMYPRH   70 (135)
T ss_dssp             TSEEEEEEEES--CHHHHHHHHTTTTCCEEEEEE--T-----T------EEEEEETTEEEEEEECSCSCSS--CCSSSCE
T ss_pred             CccceEEEEcC--CHHHHHHHHHHhcCCEeeccC--C-----C------cEEEEEeCCEEEEEEcCccccc--CCCCCCe
Confidence            44445555555  999999999999999986542  1     1      5566665655554332211111  1222347


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEEecCcccccc-cCCceEEEEEcCCCCeEEEEeeecc
Q 031118          103 LCLETE---DVEAAVAKAVSAGAVAEGELAEGNGA-CCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus       103 i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~-~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      ++|.+.   |+++++++++++|+++..+|...++. .++.+.++|+||+||+|+|++...+
T Consensus        71 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           71 FGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            777774   59999999999999998887764320 0145889999999999999987654

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.70  E-value=6.8e-16  Score=121.20  Aligned_cols=114  Identities=17%  Similarity=0.172  Sum_probs=86.9

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVG   98 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~   98 (165)
                      ...+.+.|.|+  |+++|++||+++||+++......+          ..+..+..++    ..+.+.. .+.    ...+
T Consensus       182 ~~~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~  244 (301)
T 2zw5_A          182 TLAVITELPVR--DVAATLRLVEAALGARTAFAIGDP----------PEFAEAALTPWSAGPRFRLAA-VPG----PGPV  244 (301)
T ss_dssp             EEEEEEEEEES--CHHHHHHHHHHHSCCEEEEEEETT----------EEEEEEESSSSSSSSEEEEEE-CCC----SSCC
T ss_pred             cceeEEEEEeC--CHHHHHHHHHHhcCCeEeeecCCC----------ccEEEEEcCCCcccccccccc-CCC----cCCC
Confidence            44577788887  999999999999999987543211          1244556555    3332211 111    1223


Q ss_pred             ccEEEEEEeC-CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           99 TGCVLCLETE-DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        99 ~~~~i~~~V~-dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ..++++|.|+ |+++++++++++|++++.+|...+|   |.+.++|+|||||+|+|+++
T Consensus       245 ~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~---g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          245 EPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPW---GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTT---SCEEEEEECTTSCEEEEEEC
T ss_pred             CceEEEEEcCccHHHHHHHHHHcCCccccCcccCCC---cceEEEEECCCCCEEEeeCC
Confidence            4678999999 9999999999999999999999999   99999999999999999975

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.70  E-value=2e-16  Score=113.17  Aligned_cols=115  Identities=19%  Similarity=0.193  Sum_probs=85.6

Q ss_pred             cce-eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCCCCccc-ccCCc
Q 031118           23 FTG-MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSGDSAAA-QTVGT   99 (165)
Q Consensus        23 m~~-~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~~~~~~-~~~~~   99 (165)
                      |+. ..+.|.|+  |++++++||+++||+++....  +     +      ++.+..+ +..|.|...... .+. ...+.
T Consensus        23 m~~l~hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~   86 (144)
T 2kjz_A           23 MTHPDFTILYVD--NPPASTQFYKALLGVDPVESS--P-----T------FSLFVLANGMKLGLWSRHTV-EPKASVTGG   86 (144)
T ss_dssp             CCCCCEEEEEES--CHHHHHHHHHHHHTCCCSEEE--T-----T------EEEEECTTSCEEEEEETTSC-SSCCCCSSS
T ss_pred             cCceeEEEEEeC--CHHHHHHHHHHccCCEeccCC--C-----C------eEEEEcCCCcEEEEEeCCCC-CCccCCCCC
Confidence            443 35666666  999999999999999886542  2     1      5566665 456666443211 111 12345


Q ss_pred             cEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          100 GCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       100 ~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ..+++|.|+|   +++++++++++|++++.+|...+|   | +.++|+||+||.|+|+++.
T Consensus        87 ~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~---g-~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           87 GGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEF---G-YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETT---E-EEEEECCTTCCEEEEEEEC
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCC---c-eEEEEECCCCCEEEEEecC
Confidence            6799999984   788899999999999999988888   8 8999999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.70  E-value=9.2e-16  Score=113.44  Aligned_cols=125  Identities=17%  Similarity=0.156  Sum_probs=86.2

Q ss_pred             CCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-------------------eE
Q 031118           21 ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-------------------ST   81 (165)
Q Consensus        21 ~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-------------------~~   81 (165)
                      .+++--++.|.|+  |++++++||+++|||++..+...+.    +   ......+..++                   ..
T Consensus        31 ~~~~l~Hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~----~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  101 (187)
T 3vw9_A           31 KDFLLQQTMLRVK--DPKKSLDFYTRVLGMTLIQKCDFPI----M---KFSLYFLAYEDKNDIPKEKDEKIAWALSRKAT  101 (187)
T ss_dssp             TTCEEEEEEEECS--CHHHHHHHHHHTTCCEEEEEEEETT----T---TEEEEEEESCCGGGSCSSHHHHHHHHTTCSSE
T ss_pred             ceeEEEEEEEEeC--CHHHHHHHHHHhcCcEEeeccccCC----C---ceeEEEecCCCcccccccccchhhhcccCCce
Confidence            3466566666666  9999999999999999987654331    1   12333333322                   34


Q ss_pred             EEEecCC-CC--C-cc----cccCCccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEE
Q 031118           82 FLVSDVS-GD--S-AA----AQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLI  153 (165)
Q Consensus        82 l~l~d~~-~~--~-~~----~~~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l  153 (165)
                      |.+.... ..  . .+    ........||+|.|+|+++++++++++|++++.+|...+|   + +++||+||+||.|+|
T Consensus       102 l~l~~~~~~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~---~-~~~~~~DPdG~~iel  177 (187)
T 3vw9_A          102 LELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM---K-GLAFIQDPDGYWIEI  177 (187)
T ss_dssp             EEEEEETTGGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS---T-TCEEEECTTCCEEEE
T ss_pred             EEEEEecCCCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc---c-eEEEEECCCCCEEEE
Confidence            5542211 10  0 00    0111233499999999999999999999999999887776   5 578999999999999


Q ss_pred             Eeeec
Q 031118          154 CSPVK  158 (165)
Q Consensus       154 ~~~~~  158 (165)
                      +++..
T Consensus       178 ~~~~~  182 (187)
T 3vw9_A          178 LNPNK  182 (187)
T ss_dssp             ECGGG
T ss_pred             EEccc
Confidence            99754

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.69  E-value=5.2e-16  Score=109.07  Aligned_cols=118  Identities=13%  Similarity=0.111  Sum_probs=81.3

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc--cccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA--AQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~--~~~~~~~~~i~~  105 (165)
                      .++.+.+.|+++|++||+++||+++......++    +   ......+. ++..|.|........+  ........+++|
T Consensus         7 ~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f   78 (136)
T 2rk0_A            7 SHVSLTVRDLDISCRWYTEILDWKELVRGRGDT----T---SFAHGVLP-GGLSIVLREHDGGGTDLFDETRPGLDHLSF   78 (136)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHCCEEEEEEECSS----E---EEEEEECT-TSCEEEEEEETTCSSSCCCTTSSEEEEEEE
T ss_pred             cEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC----C---ceEEEEEc-CCCEEEEEeCCCCcccCCCCCCCCcceEEE
Confidence            345555559999999999999999876542110    0   11222333 6666766443211011  112233458999


Q ss_pred             Ee---CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          106 ET---EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       106 ~V---~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .|   +|+++++++++++|+++. +|...++   | +.++|+||+||+|+|++...
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~---g-~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFT-PTQELPF---G-WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBC-CCEEETT---E-EEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCccc-CccccCC---c-eEEEEECCCCCEEEEEEcCC
Confidence            99   889999999999999977 5555677   8 99999999999999998754

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.69  E-value=1.8e-15  Score=108.08  Aligned_cols=116  Identities=17%  Similarity=0.177  Sum_probs=79.1

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcc--cccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAA--AQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~--~~~~~~~~~i~~  105 (165)
                      -++.+.+.|++++++||+++||+++....       ++      ...+..++..|.+........+  ........+++|
T Consensus        29 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-------~~------~~~l~~g~~~l~l~~~~~~~~~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           29 DHIVMTVKSIKDTTMFYSKILGMEVMTFK-------ED------RKALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICL   95 (147)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHCCEEEEET-------TT------EEEEEETTEEEEEEETTSCCSSCCSSCCTTCCEEEE
T ss_pred             cEEEEEeCCHHHHHHHHHHhcCCEEEecC-------CC------ceEEEECCcEEEEEEcCCCcCcccCCCCCCCceEEE
Confidence            34444444999999999999999987441       11      3456677777666443211111  122233467888


Q ss_pred             EeC-CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          106 ETE-DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       106 ~V~-dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      .+. |+++++++++++|+++..+|...++..+..+.++|+||+||+|+|++.
T Consensus        96 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           96 ITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            776 999999999999999887766544300012688999999999999863

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.69  E-value=3.1e-15  Score=105.84  Aligned_cols=111  Identities=14%  Similarity=0.075  Sum_probs=80.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEEe
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLET  107 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~V  107 (165)
                      .++.+.+.|++++++||+++||+++....  +     .      ...+..++..|.+.............+...|++|.|
T Consensus         6 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            6 NHLTLAVSDLQKSVTFWHELLGLTLHARW--N-----T------GAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             EEEEEEESCHHHHHHHHHTTSCCEEEEEE--T-----T------EEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEeec--C-----C------cEEEEECCEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            34444444999999999999999987653  1     1      234566777776654321110012234456999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          108 E--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       108 ~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +  |+++++++++++|+++..++..  +   + +.++|+||+||.|+|++..
T Consensus        73 ~~~d~~~~~~~l~~~G~~~~~~~~~--~---~-~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           73 AEEDFEPLSQRLEQAGVTIWKQNKS--E---G-ASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCCS--S---S-EEEEEECTTCCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHCCCeEeccCCC--c---e-eEEEEECCCCCEEEEEECc
Confidence            6  9999999999999999887642  3   4 8999999999999999865

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.68  E-value=2e-16  Score=111.66  Aligned_cols=116  Identities=18%  Similarity=0.202  Sum_probs=83.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEE-----ecCCC--CCcccc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLV-----SDVSG--DSAAAQ   95 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l-----~d~~~--~~~~~~   95 (165)
                      |+-.++.|.|+  |++++++||+++||+++....  +     +      +..+. .+..|..     ....+  ...+..
T Consensus         7 ~~l~~v~l~v~--D~~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~   70 (141)
T 2qnt_A            7 MRFVNPIPFVR--DINRSKSFYRDRLGLKILEDF--G-----S------FVLFE-TGFAIHEGRSLEETIWRTSSDAQEA   70 (141)
T ss_dssp             CCCCCCCCEES--CHHHHHHHHHHTTCCCEEEEC--S-----S------EEEET-TSCEEEEHHHHHHHHHSCCC--CCC
T ss_pred             cccceEEEEEC--CHHHHHHHHHHhcCCEEEEEc--C-----C------cEEEe-ccceeccCchhhhhccccCCccccc
Confidence            55566777787  999999999999999987542  1     1      22222 3333331     11000  000012


Q ss_pred             cCCccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           96 TVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        96 ~~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      ......|++|.|+|++++++++++ |++++.+|.+.+|   |.+.++|+||+||.|+|+++..
T Consensus        71 ~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~---g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           71 YGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW---GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTT---SCEEEEEECTTCCEEEEEECC-
T ss_pred             cCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCC---CCEEEEEECCCCCEEEEEecch
Confidence            234567999999999999999999 9999999999889   9899999999999999998753

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.68  E-value=4.9e-15  Score=104.03  Aligned_cols=109  Identities=16%  Similarity=0.077  Sum_probs=79.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      +.++.+.+.|++++++||+++||+++....  +     .      ...+..++..|.+......   ....+...|++|.
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~--~-----~------~~~~~~~~~~l~l~~~~~~---~~~~~~~~h~~~~   68 (135)
T 1nki_A            5 LNHLTLAVADLPASIAFYRDLLGFRLEARW--D-----Q------GAYLELGSLWLCLSREPQY---GGPAADYTHYAFG   68 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE--T-----T------EEEEEETTEEEEEEECTTC---CCCCSSSCEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEcC--C-----C------ceEEecCCEEEEEEeCCCC---CCCCCCcceEEEE
Confidence            344444444999999999999999987552  1     1      2235667777776543210   1223345688999


Q ss_pred             eC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+  |+++++++++++|+++..++..  +   | +.++|+||+||.|+|++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~---~-~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--E---G-DSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--S---S-CEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--C---e-EEEEEECCCCCEEEEEECC
Confidence            87  9999999999999999887643  3   4 8999999999999999865

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.68  E-value=3.2e-15  Score=106.12  Aligned_cols=114  Identities=13%  Similarity=0.118  Sum_probs=79.3

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      .++.+.+.|++++++||+++||+++......++    +   ......+..++    ..|.+........ ........|+
T Consensus        10 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~---~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~   81 (144)
T 2c21_A           10 LHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPE----D---KYTLVFLGYGPEMSSTVLELTYNYGVTS-YKHDEAYGHI   81 (144)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGG----G---TEEEEEEESSCTTTSCEEEEEEETTCCC-CCCCSSEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCC----C---CeEEEEEEcCCCCCceEEEEEecCCCCC-CCCCCCceEE
Confidence            344444459999999999999999976643231    1   12235556553    5666644321100 1112334699


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEE-EEEcCCCCeEEEEeee
Q 031118          104 CLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVG-KVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~-~~~DP~G~~~~l~~~~  157 (165)
                      +|.|+|+++++++++++|+++..+     +   |.+.+ +|+||+||.|+|++..
T Consensus        82 ~f~v~d~~~~~~~l~~~G~~~~~~-----~---g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           82 AIGVEDVKELVADMRKHDVPIDYE-----D---ESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEE-----C---SSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEEeCCHHHHHHHHHHCCCEEecc-----C---CcEEEEEEECCCCCEEEEEEcC
Confidence            999999999999999999998866     5   65554 9999999999999854

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.67  E-value=7.5e-16  Score=110.13  Aligned_cols=113  Identities=18%  Similarity=0.209  Sum_probs=74.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEE-ECCeEEEEecCC------CCCcccccCCc
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLE-IAGSTFLVSDVS------GDSAAAQTVGT   99 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~-~g~~~l~l~d~~------~~~~~~~~~~~   99 (165)
                      .+.|.|+  |+++|++||++ ||+.......      ++.     ...+. .++..+++....      +........++
T Consensus        12 ~V~L~V~--Dl~~s~~FY~~-lg~~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A           12 FVNLPVA--DVAASQAFFGT-LGFEFNPKFT------DES-----CACMVVSEQAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             EEEEEES--CHHHHHHHHHH-TTCEECGGGC------BTT-----EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             EEEEEeC--CHHHHHHHHHH-hCCCcceeec------CCc-----eeEEeecCcceEeeeccccccccccccCCCCCCCC
Confidence            3445555  99999999988 5554432211      111     22222 244444432211      11011234556


Q ss_pred             cEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          100 GCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       100 ~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ..|++|.|.+   +++++++++++|+++..+|.+.+|   + +.+||+|||||+|||++..
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~---~-~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF---M-YGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS---E-EEEEEECTTCCEEEEEEEC
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC---E-EEEEEEcCCCCEEEEEEEC
Confidence            7799999964   677899999999999999998876   6 8999999999999998743

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.67  E-value=2.5e-15  Score=106.88  Aligned_cols=105  Identities=14%  Similarity=0.132  Sum_probs=75.9

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ..|.|+  |++++++||+++||+++....  +    ++.     ++.+..++  ..|.+.....       .....|++|
T Consensus        32 v~l~v~--Dl~~a~~FY~~~LG~~~~~~~--~----~~~-----~~~~~~~~~~~~l~l~~~~~-------~~~~~h~~~   91 (141)
T 3ghj_A           32 VAVKVK--NLEKSSQFYTEILGFEAGLLD--S----ARR-----WNFLWVSGRAGMVVLQEEKE-------NWQQQHFSF   91 (141)
T ss_dssp             EEEEES--CHHHHHHHHHHTSCCEEEEEE--T----TTT-----EEEEEETTTTEEEEEEECCS-------SCCCCEEEE
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEEEec--C----CCc-----EEEEEecCCCcEEEEeccCC-------CCCCceEEE
Confidence            445555  999999999999999987663  1    111     44555553  5666655421       122346777


Q ss_pred             EeC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          106 ETE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       106 ~V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .|+  |+++++++++++|+++..++....+   +.+.++|+||+||.|+|++
T Consensus        92 ~v~~~dld~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           92 RVEKSEIEPLKKALESKGVSVHGPVNQEWM---QAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EECGGGHHHHHHHHHHTTCCCEEEEEEGGG---TEEEEEEECTTCCEEEEEE
T ss_pred             EEeHHHHHHHHHHHHHCCCeEeCCcccCCC---CceEEEEECCCCCEEEEEE
Confidence            776  9999999999999998854444444   5699999999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.66  E-value=3.8e-15  Score=117.79  Aligned_cols=114  Identities=18%  Similarity=0.168  Sum_probs=84.1

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEE-EecCCCCCcccccCCccEEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFL-VSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~-l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      .++.+.+.|++++++||+++||+++......+     +    ..+..+..++..+. +....+     ...++.++++|.
T Consensus       166 ~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  231 (282)
T 3oxh_A          166 IWNELLTDKPDLALAFYEAVVGLTHSSMEIAA-----G----QNYRVLKAGDAEVGGCMEPPM-----PGVPNHWHVYFA  231 (282)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHCCEEEEC----------------CEEEEETTEEEEEEECCSS-----TTCCSEEEEEEE
T ss_pred             EEEEEEcCCHHHHHHHHHHHhCCeeeeccCCC-----C----cceEEEEcCCccEeeecCCCC-----CCCCCeEEEEEE
Confidence            34444444999999999999999986432011     1    12556666664432 222111     234567899999


Q ss_pred             eCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          107 TEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       107 V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |+|+++++++++++|++++.+|.+.+|   |.++++|+||+||.|+|+++..
T Consensus       232 v~dvd~~~~~~~~~G~~~~~~p~~~~~---~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          232 VDDADATAAKAAAAGGQVIAEPADIPS---VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CSCHHHHHHHHHHTTCEEEEEEEEETT---TEEEEEEECTTSCEEEEEEEC-
T ss_pred             eCCHHHHHHHHHHcCCEEecCCeEcCC---CeEEEEEECCCCCEEEEEecCC
Confidence            999999999999999999999999888   8899999999999999998764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.65  E-value=3e-15  Score=107.92  Aligned_cols=129  Identities=12%  Similarity=0.062  Sum_probs=87.1

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc-----cccCC--CCceEEEEEEECCeEEEEecCCCCCcc--
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR-----KAEQE--LPLISCAQLEIAGSTFLVSDVSGDSAA--   93 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~-----~~~g~--~~~v~~~~l~~g~~~l~l~d~~~~~~~--   93 (165)
                      +..-+.++.+.+.|++++++||+++||+++......+..     ...|.  ......+.+..++..|.|........+  
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~~~   95 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTWR   95 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCHHH
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCChhH
Confidence            333445555555699999999999999987644322110     00000  013456667778877776543221110  


Q ss_pred             --cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCC--CCeEEEEee
Q 031118           94 --AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPY--GFTWLICSP  156 (165)
Q Consensus        94 --~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~--G~~~~l~~~  156 (165)
                        ....+.++ ||+|.|+|+++++++++++|++++.++.  .+   |.+++||+||+  |+.|||+++
T Consensus        96 ~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~--~~---g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           96 EFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD--FE---GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE--ET---TEEEEEESCHHHHSSEEEEEEE
T ss_pred             HHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc--cC---CeeEEEEeccccCcEEEEEEec
Confidence              01124455 9999999999999999999999987753  24   67999999999  999999985

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.64  E-value=1.9e-15  Score=109.66  Aligned_cols=115  Identities=15%  Similarity=0.144  Sum_probs=81.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC----CC--cccccCCcc-
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG----DS--AAAQTVGTG-  100 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~----~~--~~~~~~~~~-  100 (165)
                      .++.+.+.|+++|++||+++||+++....  +     +.     ...+..++..+.+.....    ..  ......+.+ 
T Consensus        10 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~-----~~-----~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~   77 (160)
T 3r4q_A           10 METALYADDLDAAEAFYRDVFGLEMVLKL--P-----GQ-----LVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQ   77 (160)
T ss_dssp             EEEEEECSCHHHHHHHHHHHSCCEEEEEE--T-----TT-----EEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEE
T ss_pred             cEEEEEeCCHHHHHHHHHHhcCCEEEEec--C-----Cc-----EEEEeCCCEEEEEEecCCccCccccCCCCcCCCcce
Confidence            34444445999999999999999987653  1     11     334455776666543211    00  001222344 


Q ss_pred             EEEEEEe---CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          101 CVLCLET---EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       101 ~~i~~~V---~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .|++|.|   +|+++++++++++|+++..++.. ++   |.+.++|+||+||+|+|+++..
T Consensus        78 ~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~---g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           78 GHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PN---GSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TT---SCEEEEEECTTCCEEEEEEGGG
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cC---CcEEEEEECCCCCEEEEEeCCC
Confidence            6999999   88999999999999998865543 34   6699999999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.63  E-value=1.1e-14  Score=115.03  Aligned_cols=119  Identities=15%  Similarity=0.166  Sum_probs=84.7

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEE-EEecCCCCCcccccCCccEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTF-LVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l-~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      ..++.+.+.|+++|++||+++||+++..... +    .+.   ..+..+..++..+ .+....+..  +...+.+++++|
T Consensus        33 ~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~----~~~---~~~~~~~~~g~~~~~l~~~~~~~--~~~~~~~~~~~~  102 (282)
T 3oxh_A           33 PNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-P----GGG---GVYSMATLNGEAVAAIAPMPPGA--PEGMPPIWNTYI  102 (282)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEC-------------CCEEEEEETTEEEEEEEECCSCC-----CCCEEEEEE
T ss_pred             cEEEEEecCCHHHHHHHHHHhcCcEEeecCC-C----CCc---cCEEEEEeCCeeeEeeccCCCCC--CCCCCCcEEEEE
Confidence            4455555559999999999999999865421 1    110   0155666666433 232222110  123467789999


Q ss_pred             EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          106 ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       106 ~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .|+|+++++++++++|++++.+|...++   ..+.++|+||+||.|+|++...
T Consensus       103 ~v~d~d~~~~~l~~~G~~~~~~p~~~~~---~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          103 AVDDVDAVVDKVVPGGGQVMMPAFDIGD---AGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             ECSCHHHHHTTTTTTTCEEEEEEEEETT---TEEEEEEECTTCCEEEEEEESS
T ss_pred             EeCCHHHHHHHHHHCCCEEEECCEecCC---CeEEEEEECCCCCEEEEEEccc
Confidence            9999999999999999999999888764   4599999999999999998764

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.62  E-value=2.1e-14  Score=102.69  Aligned_cols=118  Identities=10%  Similarity=0.035  Sum_probs=81.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHH---HHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC-CC-cc-ccc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFY---KTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG-DS-AA-AQT   96 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY---~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~-~~-~~-~~~   96 (165)
                      ++-..+.|.|+  |++++++||   +++||+++....  +    .+      ...+. ++..|.|..... .. .+ ...
T Consensus        19 ~~i~hv~l~v~--Dl~~a~~FY~~~~~~LG~~~~~~~--~----~~------~~~~~-g~~~l~l~~~~~~~~~~~~~~~   83 (146)
T 3ct8_A           19 GMLHHVEINVD--HLEESIAFWDWLLGELGYEDYQSW--S----RG------KSYKH-GKTYLVFVQTEDRFQTPTFHRK   83 (146)
T ss_dssp             TSCCEEEEEES--CHHHHHHHHHHHHHHTTCEEEEEE--T----TE------EEEEE-TTEEEEEEECCGGGSCSCCCTT
T ss_pred             cceeEEEEEeC--CHHHHHHHHHhhhhhCCCEEEEec--C----CC------ceEec-CCeEEEEEEcCCCccccccccc
Confidence            34455666677  999999999   999999987653  1    11      12233 676777654321 00 01 111


Q ss_pred             CCccEEEEEEeC---CHHHHHHHHHHCCCeEEe-cCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           97 VGTGCVLCLETE---DVEAAVAKAVSAGAVAEG-ELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        97 ~~~~~~i~~~V~---dv~~~~~~~~~~G~~i~~-~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      .....|++|.|+   |+++++++++++|+++.. +|....+ ..|.+.++|+||+||.|+|+++
T Consensus        84 ~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           84 RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAG-GPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTT-CTTCCEEEEECTTCCEEEEECC
T ss_pred             CCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccC-CCceEEEEEECCCCCEEEEEeC
Confidence            223369999999   899999999999999987 4655443 0046899999999999999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.60  E-value=1.7e-14  Score=101.79  Aligned_cols=120  Identities=15%  Similarity=0.232  Sum_probs=76.5

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCcc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      |+....++.+.+.|+++|++||+++||+++......+     +   ......+..++  ..|.+...... .+.......
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~-----~---~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~   78 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-----N---GYDGVMFGLPHADYHLEFTQYEGG-STAPVPHPD   78 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-----T---TEEEEEEESSSSSEEEEEEEETTC-CCCCCCCTT
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCC-----C---CeeEEEEecCCCceEEEEeecCCC-CCCCCCCCc
Confidence            5544455554445999999999999999987653211     1   12233444443  23444321110 001111233


Q ss_pred             EEEEEEeCCH---HHHHHHHHHCCCeEEe--cCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDV---EAAVAKAVSAGAVAEG--ELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv---~~~~~~~~~~G~~i~~--~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|++|.|+|+   ++++++++++|+.+..  .+....+   |  . ||+||+||+|+|+++.
T Consensus        79 ~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~---g--~-~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           79 SLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNG---G--V-TIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSS---E--E-EEECTTCCEEEEESSC
T ss_pred             cEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCC---C--e-EEECCCCCEEEEEEcC
Confidence            5999999999   9999999999999884  3333334   4  2 6999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.60  E-value=1.4e-14  Score=98.41  Aligned_cols=108  Identities=16%  Similarity=0.107  Sum_probs=77.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-eEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-STFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |+--...|.|+  |++++++||+++||+++....  .     ..     +..+..++ ..|.+.....     ...+...
T Consensus         2 ~~i~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~--~-----~~-----~~~~~~~~~~~l~l~~~~~-----~~~~~~~   62 (113)
T 1xqa_A            2 MGIKHLNLTVA--DVVAAREFLEKYFGLTCSGTR--G-----NA-----FAVMRDNDGFILTLMKGKE-----VQYPKTF   62 (113)
T ss_dssp             CCCCEEEEEES--CHHHHHHHHHHHHCCEEEEEE--T-----TT-----EEEEECTTCCEEEEEECSS-----CCCCTTC
T ss_pred             CeeEEEEEEeC--CHHHHHHHHHHhCCCEEeccC--C-----Cc-----EEEEEcCCCcEEEEEeCCC-----CCCCcee
Confidence            44445667777  999999999999999987542  1     11     44555543 4566654321     1123467


Q ss_pred             EEEEEe---CCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          102 VLCLET---EDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       102 ~i~~~V---~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |++|.|   +|++++++++++.|+++. +|...     +.+.++|+||+||.|+|+.
T Consensus        63 ~~~~~v~~~~d~~~~~~~l~~~G~~~~-~p~~~-----~~~~~~~~DPdG~~iel~~  113 (113)
T 1xqa_A           63 HVGFPQESEEQVDKINQRLKEDGFLVE-PPKHA-----HAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHTTCCCC-CCEEC------CEEEEEEETTTEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCEEe-cCcCC-----CcEEEEEECCCCcEEEEeC
Confidence            999999   889999999999999975 45332     2489999999999999973

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.46  E-value=2.2e-12  Score=103.91  Aligned_cols=120  Identities=8%  Similarity=0.053  Sum_probs=78.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC----CeEEEEecCCCCCcccccCCccEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA----GSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g----~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      .++.+.+.|+++|++||+++||+++........   ++   ...+..+..+    +..|.+.............+...|+
T Consensus        32 ~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~---~~---~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hi  105 (338)
T 1zsw_A           32 HHISMVTKNANENNHFYKNVLGLRRVKMTVNQD---DP---SMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRI  105 (338)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCCEEEEEEEETT---EE---EEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             cEEEEEcCCHHHHHHHHHHhcCCEEEEeecccC---CC---ceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeE
Confidence            344444449999999999999999876531110   00   0112222222    2455544322110001112234589


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          104 CLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       104 ~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +|.|+   |+++++++++++|+++..++.  .+   |.+.++|+||+||.|+|++...
T Consensus       106 af~v~~~~dld~~~~~l~~~G~~~~~~~~--~~---G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          106 GLLVPSEDSLHYWKERFEKFDVKHSEMTT--YA---NRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECCSEE--ET---TEEEEEEECTTCCEEEEEECTT
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCccccccc--cC---CcEEEEEECCCCCEEEEEEcCC
Confidence            99998   688889999999999886654  36   7799999999999999998763

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.45  E-value=2.7e-12  Score=103.55  Aligned_cols=112  Identities=11%  Similarity=0.103  Sum_probs=77.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.+.|++++++||+++||+++......      ..     +..+..++.  .|.+......   ........|++|.
T Consensus       162 hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~------~~-----~~~l~~g~~~~~l~l~~~~~~---~~~~~~~~hiaf~  227 (330)
T 3zi1_A          162 KVTLAVSDLQKSLNYWCNLLGMKIYENDEE------KQ-----RALLGYADNQCKLELQGVKGG---VDHAAAFGRIAFS  227 (330)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEETT------TT-----EEEEESSTTSCEEEEEECSSC---CCCBTTCCEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHhcCCEEEeeccC------Cc-----EEEEEeCCceEEEEECCCCCC---CCCCCCCceEEEE
Confidence            444444499999999999999999866421      11     344555543  4444333211   0111223378888


Q ss_pred             eC--CHHHHHHHHHHCCCeEEecCccc----ccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TE--DVEAAVAKAVSAGAVAEGELAEG----NGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~--dv~~~~~~~~~~G~~i~~~p~~~----~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+  |+++++++++++|+++..+|...    .+   |.+.++|+||+||.|+|++..
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~---g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKA---TVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSC---CEEEEEEECTTCCEEEEEEHH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCC---ceEEEEEECCCCCEEEEEEec
Confidence            85  78999999999999998887653    34   568999999999999999854

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.40  E-value=5e-12  Score=99.78  Aligned_cols=117  Identities=14%  Similarity=0.080  Sum_probs=76.5

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCc---cc-ccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCcc
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETK---RK-AEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~---~~-~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      +..|.|+  |++++++||+++||+++......+.   .. ..+.  ......+..++  ..+.+... +      ..+..
T Consensus       145 hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~--~~~~~~~~~~~~~~~~~~~~~-~------~~~g~  213 (300)
T 2zyq_A          145 HVVLSTR--DDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGP--PAWLRFFGCNPRHHSLAFLPM-P------TSSGI  213 (300)
T ss_dssp             EEEEECS--CHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSC--CEEEEEEESSSBSCSEEEESS-C------CSSSE
T ss_pred             eEEEEeC--CHHHHHHHHHHhcCCEEeeeecccccccccCCCCC--ceEEEEEEECCCccEEEEecC-C------CCCCc
Confidence            4445555  9999999999999999865432210   00 0010  01223333332  22333321 1      12234


Q ss_pred             EEEEEEeCCHHH---HHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDVEA---AVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|++|.|+|+++   ++++++++|+++..+|...++   + .+.+||+||+||+|+|++..
T Consensus       214 ~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~---~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          214 VHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVN---DLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESS---SCCEEEEEECTTSSEEEEEECC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCC---CCeEEEEEECCCCCEEEEEeCC
Confidence            589999999665   599999999999988876655   4 68899999999999999754

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.39  E-value=4.1e-12  Score=100.57  Aligned_cols=113  Identities=8%  Similarity=-0.012  Sum_probs=74.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .++.+.+.|++++++||+++||+++.......    .+   ......+..++  ..+.+...       ...+...|++|
T Consensus       152 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~---~~~~~~l~~~~~~~~~~~~~~-------~~~g~~~hi~f  217 (307)
T 1mpy_A          152 DHALMYGDELPATYDLFTKVLGFYLAEQVLDE----NG---TRVAQFLSLSTKAHDVAFIHH-------PEKGRLHHVSF  217 (307)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEEECT----TC---CEEEEEEESSSBSCSEEEEEC-------SSSSEEEEEEE
T ss_pred             eeEEEEcCCHHHHHHHHHHHcCCeeEeeeecC----CC---cEEEEEEEcCCCceeEEEecC-------CCCCcceEEEE
Confidence            34444444999999999999999987553211    11   01111223322  12222211       11223579999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          106 ETED---VEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+|   +++++++++++|+++..+|....+   + .+.+||+||+||+|+|++..
T Consensus       218 ~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~---~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          218 HLETWEDLLRAADLISMTDTSIDIGPTRHGL---THGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSS---TTCEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHHCCCceeeCCccCCC---CCceEEEEECCCCcEEEEEecc
Confidence            9994   666789999999999888776543   3 47899999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.38  E-value=1.3e-11  Score=98.83  Aligned_cols=107  Identities=15%  Similarity=0.203  Sum_probs=77.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEecCCCCCcccccCCccEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      .++.+.+.|++++++||+++||+++....  +     +      ...+.. ++   ..|.+....        .....++
T Consensus        19 ~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~--~-----~------~~~l~~~~~~~~~~l~l~~~~--------~~~~~~~   77 (323)
T 1f1u_A           19 AYMEIVVTDLAKSREFYVDVLGLHVTEED--E-----N------TIYLRSLEEFIHHNLVLRQGP--------IAAVAAF   77 (323)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEC--S-----S------EEEEECTTCCSSCSEEEEECS--------SCEEEEE
T ss_pred             eEEEEEeCCHHHHHHHHHhCCCCEEeeec--C-----C------EEEEEecCCCCcEEEEEEECC--------CCCeeEE
Confidence            34444444999999999999999987542  1     1      233443 21   234433211        1234589


Q ss_pred             EEEe---CCHHHHHHHHHHCCCeEEecCc-ccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          104 CLET---EDVEAAVAKAVSAGAVAEGELA-EGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       104 ~~~V---~dv~~~~~~~~~~G~~i~~~p~-~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +|.|   +|+++++++++++|+++..++. ..++   +.+.++|+||+||.|+|++...
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~---~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKG---IGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTT---BCSEEEEECTTSCEEEEECCBC
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCC---cceEEEEECCCCCEEEEEEecc
Confidence            9999   7899999999999999998877 4556   6689999999999999998754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.38  E-value=6.3e-12  Score=100.25  Aligned_cols=106  Identities=21%  Similarity=0.234  Sum_probs=78.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.+.+.|++++.+||+++||+++....  +     +      ...+..++    ..|.+....        .....+++
T Consensus        11 ~v~l~v~Dl~~a~~FY~~vlG~~~~~~~--~-----~------~~~l~~~~~~~~~~l~l~~~~--------~~~~~~~~   69 (310)
T 3b59_A           11 YVGYGVKDFDAEKAFYADVWGLEPVGED--A-----N------NAWFKAQGADEHHVVQLRRAD--------ENRIDVIA   69 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEC--S-----S------EEEEECTTSCCSCSEEEEECS--------SCEEEEEE
T ss_pred             EEEEecCCHHHHHHHHHhCcCCEEeeec--C-----C------eEEEEECCCCCCEEEEEEECC--------CCCeeEEE
Confidence            3444444999999999999999987542  1     1      34455544    445554321        12335899


Q ss_pred             EEe---CCHHHHHHHHHHCCCeEEecCcc--cccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LET---EDVEAAVAKAVSAGAVAEGELAE--GNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V---~dv~~~~~~~~~~G~~i~~~p~~--~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.|   +|+++++++++++|+++..++..  .++   +.+.++|+||+||.|+|++...
T Consensus        70 ~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           70 LAADSRSDVDALRASVEAAGCKVASEPAVLATPG---GGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             EEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTT---CCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHhCCCeEeecCccccccC---CceEEEEECCCCCEEEEEEccc
Confidence            998   68889999999999999888765  566   7799999999999999998654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.38  E-value=1.7e-11  Score=98.77  Aligned_cols=110  Identities=10%  Similarity=0.049  Sum_probs=74.4

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--C---eEEEEecCCCCCcccccCCccEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--G---STFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~---~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      .++.+.+.|++++++||+++|||++....  +     +      +..+..+  +   ..+.+....+. . ....+...|
T Consensus       182 ~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~g~~~~~~~~~~~~~~-~-~~~~~~~~h  246 (338)
T 1zsw_A          182 GSVELTVRRLDKMASTLTEIFGYTEVSRN--D-----Q------EAIFQSIKGEAFGEIVVKYLDGPT-E-KPGRGSIHH  246 (338)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEC--S-----S------EEEEESSTTCSTTCEEEEECCSSB-C-BCCBTCEEE
T ss_pred             EEEEEEECCHHHHHHHHHHhcCCEEEeec--C-----C------eEEEEecCCCCceEEEEeccCCCC-C-CCCCCceEE
Confidence            34444444999999999999999987552  1     1      3344442  2   22333221110 0 111233469


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+   |+++++++++++|+++. +|... +   +.+.+||+||+||.|+|++..
T Consensus       247 iaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~-~---~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          247 LAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR-F---YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC-S---SEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcee-eeeec-C---ceEEEEEECCCCCEEEEEEcC
Confidence            999999   68888999999999985 56554 4   568899999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.38  E-value=1.6e-11  Score=99.24  Aligned_cols=116  Identities=12%  Similarity=-0.054  Sum_probs=78.7

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      .-++.+.+.|++++++||+++|||++..... +    ++   ......+..++  ..|.+.....     ...+...|++
T Consensus       154 l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~----~g---~~~~~~l~~~~~~~~l~~~~~~~-----~~~~~~~Hia  220 (339)
T 3lm4_A          154 IDHLNLMSSDVTAVKDSFERHLGFRTTERVV-D----GN---VEIGAWMSSNLLGHEVACMRDMT-----GGHGKLHHLA  220 (339)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-E----TT---EEEEEEEESSSSSCSEEEEECTT-----SCCSEEEEEE
T ss_pred             eeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-c----CC---cEEEEEEEeCCCceEEEEeccCC-----CCCCceeEEE
Confidence            3444444459999999999999999876543 1    11   11223334333  2343332111     1233456999


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|+|   +++++++++++|+++..+|.+...  .+.+++||+||+||+|||++..
T Consensus       221 f~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~--~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          221 FFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGI--TQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCEEEEEEEEETG--GGEEEEEEECTTSCEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEEeCCccccc--CCceEEEEEcCCCCEEEEEEcC
Confidence            99999   777899999999999988876444  0358899999999999998543

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.37  E-value=6.1e-12  Score=99.58  Aligned_cols=108  Identities=16%  Similarity=0.180  Sum_probs=76.3

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      ....|.|+  |++++++||+++||+++....  +    .+      ...+..++    ..|.+...        ......
T Consensus         9 ~hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~--~----~~------~~~l~~~~~~~~~~l~~~~~--------~~~~~~   66 (307)
T 1mpy_A            9 GHVQLRVL--DMSKALEHYVELLGLIEMDRD--D----QG------RVYLKAWTEVDKFSLVLREA--------DEPGMD   66 (307)
T ss_dssp             EEEEEEES--CHHHHHHHHHHTTCCEEEEEC--T----TS------CEEEECTTCCBSCSEEEEEC--------SSCEEE
T ss_pred             eeEEEEeC--CHHHHHHHHHHccCCEEEeec--C----CC------cEEEEecCCCCceEEEEccC--------CCCCcc
Confidence            34445555  999999999999999987652  1    11      12233322    12322211        112446


Q ss_pred             EEEEEe---CCHHHHHHHHHHCCCeEEecCc-ccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          102 VLCLET---EDVEAAVAKAVSAGAVAEGELA-EGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       102 ~i~~~V---~dv~~~~~~~~~~G~~i~~~p~-~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |++|.|   +|+++++++++++|+++..+|. ..++   +.+.++|+||+||.|+|++...
T Consensus        67 ~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           67 FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNS---CGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTT---BCCEEEEECTTSCEEEEESCBC
T ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCC---ceEEEEEECCCCCEEEEEEcch
Confidence            899999   7899999999999999988876 4455   5689999999999999998653

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.36  E-value=1.5e-11  Score=96.87  Aligned_cols=115  Identities=12%  Similarity=0.032  Sum_probs=75.9

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      -+..|.|+  |++++++||+++||+++......+..  .+.  ......+..++  ..|.+... +      ..+...|+
T Consensus       144 ~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~------~~~~~~hi  210 (297)
T 1lgt_A          144 GHFVRCVP--DSDKALAFYTDVLGFQLSDVIDMKMG--PDV--TVPAYFLHCNERHHTLAIAAF-P------LPKRIHHF  210 (297)
T ss_dssp             CEEEEECS--CHHHHHHHHHHTTCCEEEEEEEEEEE--TTE--EEEEEEEESSSBSCSEEEECC-C------CSSSEEEE
T ss_pred             ceEEEecC--CHHHHHHHHHHhcCCeeeeEEeccCC--CCc--cceEEEEEeCCCcceEEEEcC-C------CCCCceEE
Confidence            34455555  99999999999999998654321100  000  00122233332  23333321 1      12334589


Q ss_pred             EEEeCCHHHHH---HHHHHCCCeEEecCcccccccCCc-eEEEEEcCCCCeEEEEeee
Q 031118          104 CLETEDVEAAV---AKAVSAGAVAEGELAEGNGACCGE-RVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~dv~~~~---~~~~~~G~~i~~~p~~~~~~~~G~-~~~~~~DP~G~~~~l~~~~  157 (165)
                      +|.|+|++++.   ++ +++|+++..+|...++   |. +.+||+||+||+|+|++..
T Consensus       211 af~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~---g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          211 MLEVASLDDVGFAFDR-VDADGLITSTLGRHTN---DHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESS---SCCEEEEEECTTSCEEEEEECC
T ss_pred             EEeCCCHHHHHHHHHH-HhCCCcccccCcccCC---CCcEEEEEECCCCcEEEEecCC
Confidence            99999987775   88 9999999988887776   63 5689999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.36  E-value=1.1e-11  Score=98.33  Aligned_cols=115  Identities=10%  Similarity=-0.010  Sum_probs=76.6

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +.++.+.+.|++++++||+++||+++......+.   .+   ......+..++.  .+.+...       ...+...|++
T Consensus       152 i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~Hia  218 (309)
T 3hpy_A          152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPD---GD---SDMGIWLSCSHKVHDIAFVEY-------PEKGKLHHCS  218 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSS---SC---SEEEEEEESSSSSCSEEEEEC-------SSTTEEEEEE
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCC---CC---ceEEEEEecCCCceeEEEecC-------CCCCceeEEE
Confidence            3444455559999999999999999876543221   01   122333333332  2222221       1123456999


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          105 LETEDVEA---AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       105 ~~V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |.|+|+++   ++++++++|+++..+|....+  ++.+++||+||+||+|||+..
T Consensus       219 f~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          219 FLLESWEQVLRAGDIMSMNEVNVDIGPTRHGV--TRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCBSSCSEECSS--SSEEEEEEECTTSCEEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHHCCCEEEeCCccCCC--CccEEEEEECCCCCEEEEEeC
Confidence            99998765   578999999998887776544  045889999999999999876

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.36  E-value=1.3e-11  Score=96.41  Aligned_cols=108  Identities=12%  Similarity=0.080  Sum_probs=78.2

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEE
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      -...|.|+  |++++++||+++||+++....  +     +      ...+..++..|.+......      .....+++|
T Consensus        28 ~hV~L~V~--Dle~s~~FY~~vLGl~~~~~~--~-----~------~~~L~~g~~~l~l~~~~~~------~~~~~hiaf   86 (252)
T 3pkv_A           28 KQLTLYTA--ELDRMLAFYTNMLGAQHVHEQ--A-----D------AFTIQLGVSQIQFRAAADG------TKPFYHIAI   86 (252)
T ss_dssp             EEEEEEES--CHHHHHHHHHHHHCGGGEEEC--S-----S------EEEEEETTEEEEEEECCTT------CCCCCEEEE
T ss_pred             EEEEEEeC--CHHHHHHHHHHhcCCEEEEcc--C-----C------EEEEEeCCEEEEEEECCCC------CCCeeEEEE
Confidence            34555555  999999999999999987652  1     1      4556667777766553211      123457777


Q ss_pred             EeC--CHHHHHHHHHHCCCeEEec-Ccc----cccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          106 ETE--DVEAAVAKAVSAGAVAEGE-LAE----GNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       106 ~V~--dv~~~~~~~~~~G~~i~~~-p~~----~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      .|.  +++++++++.++ +.+..+ +..    ..|   +.+.++|+||+||.|+|++...
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~---g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFF---NAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTT---TEEEEEEECTTCCEEEEEEESS
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccC---CeEEEEEECCCCCEEEEEEeCC
Confidence            764  699999999999 887663 332    457   7899999999999999998653

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.35  E-value=3.1e-11  Score=97.71  Aligned_cols=119  Identities=12%  Similarity=0.058  Sum_probs=78.1

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC----CeEEEEecCCCCCcccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA----GSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g----~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +-++.+.+.|++++++||+++||++++.+....+   +.   ...+..+...    +..|.+.............+...|
T Consensus         9 i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~---~~---~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~h   82 (335)
T 3oaj_A            9 IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFD---DP---GTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGV   82 (335)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSS---CT---TSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCC---CC---ceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEE
Confidence            3444444459999999999999999987642110   01   1122333222    345555433211000111223359


Q ss_pred             EEEEeC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+  |++++++++.+.|+.+..   ...+   |.+.+||+||+||.|+|++..
T Consensus        83 iaf~V~~~dl~~~~~rL~~~Gv~~~~---~~~~---g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           83 TSYVVPKGAMAFWEKRLEKFNVPYTK---IERF---GEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEECTTCHHHHHHHHHHTTCCCEE---EEET---TEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEecHHHHHHHHHHHHhCcceeee---eccC---CcEEEEEECCCCCEEEEEEeC
Confidence            999999  999999999999998874   3345   779999999999999999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.34  E-value=1e-11  Score=98.45  Aligned_cols=107  Identities=10%  Similarity=0.030  Sum_probs=76.5

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ..++.+.+.|++++++||+++||+++....  .    ++      ...+..++  ..|.+....        .....|++
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~----~~------~~~~~~~~~~~~l~l~~~~--------~~~~~~~~   66 (305)
T 2wl9_A            7 LGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--E----DD------RIYLRMDRWHHRIVLHADG--------SDDLAYIG   66 (305)
T ss_dssp             EEEEEEECSCHHHHHHHHTTTTCCEEECCS--C----TT------EEEEECSSBSCSEEEECSS--------CCEEEEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCCEEeecc--C----CC------eEEEEeCCCeEEEEEEECC--------CCCeEEEE
Confidence            344555555999999999999999986411  1    11      23344554  445553321        22345899


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEEecCccc---ccccCCceEEEEEcCCCCeEEEEee
Q 031118          105 LETE---DVEAAVAKAVSAGAVAEGELAEG---NGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       105 ~~V~---dv~~~~~~~~~~G~~i~~~p~~~---~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |.|+   |+++++++++++|+++..+|...   .+   +.+.++|+||+||.|+|++.
T Consensus        67 f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~---~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           67 WRVAGPVELDELAEQLKNAGIPFEVASDADAAERR---VLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTT---EEEEEEEECTTCCEEEEEEE
T ss_pred             EEECCHHHHHHHHHHHHHCCCceEeCCcccccccC---cEEEEEEECCCCCEEEEEEC
Confidence            9997   58889999999999988777643   33   45889999999999999987

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.33  E-value=2.3e-11  Score=95.80  Aligned_cols=106  Identities=17%  Similarity=0.167  Sum_probs=75.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ...|.|+  |++++++||+++||+++....  +     +      ...+..++.  .|.+...        ......|++
T Consensus         7 hv~l~v~--Dl~~s~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~~~l~~~~~--------~~~~~~~~~   63 (297)
T 1lgt_A            7 YMGFAVS--DVAAWRSFLTQKLGLMEAGTT--D-----N------GDLFRIDSRAWRIAVQQG--------EVDDLAFAG   63 (297)
T ss_dssp             EEEEEES--CHHHHHHHHHHTTCCEEEEEE--T-----T------EEEEESSSBSCSEEEEEC--------TTCEEEEEE
T ss_pred             EEEEEcC--CHHHHHHHHHHccCCEEeecC--C-----C------eEEEEeCCCcEEEEEecC--------CCCCccEEE
Confidence            3445555  999999999999999987652  1     1      223344442  2333221        112335899


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEEecCcc---cccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LETE---DVEAAVAKAVSAGAVAEGELAE---GNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V~---dv~~~~~~~~~~G~~i~~~p~~---~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.|+   |+++++++++++|+++..++..   ..+   +.+.++|+||+||.|+|++...
T Consensus        64 f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRG---VTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHT---CSEEEEEECTTSCEEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCC---ceeEEEEECCCCCEEEEEECcc
Confidence            9998   8999999999999998876653   234   5689999999999999998653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.33  E-value=2.3e-11  Score=96.50  Aligned_cols=107  Identities=15%  Similarity=0.176  Sum_probs=74.8

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEecCCCCCcccccCCccEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.+.+.|++++++||+++||+++..+.  +    .+      ...+.. ++   ..|.+...        ......|++
T Consensus        11 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~----~~------~~~l~~~~~~~~~~l~l~~~--------~~~~~~h~a   70 (309)
T 3hpy_A           11 HAQVRVLNLEEGIHFYRNVLGLVETGRD--D----QG------RVYFKCWDERDHSCYIIREA--------DTAGIDFFG   70 (309)
T ss_dssp             EEEEEESSHHHHHHHHHHTSCCEEEEEC--T----TS------CEEEECTTCCBSCSEEEEEC--------SSCEEEEEE
T ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEEc--C----CC------eEEEEeccCCCceEEEEEeC--------CCCceeEEE
Confidence            4444444999999999999999987652  1    01      122332 22   23333221        122446899


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcc-cccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAE-GNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~-~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.|.|   +++++++++++|+++...+.. ..+   +.+.++|+||+||.|+|++...
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~---~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLE---TGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTT---BCCEEEEECTTSCEEEEESCBC
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCC---CeeEEEEECCCCCEEEEEEccc
Confidence            99987   888899999999998877653 234   5689999999999999998653

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.33  E-value=2.1e-11  Score=95.87  Aligned_cols=106  Identities=15%  Similarity=0.111  Sum_probs=75.3

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ...|.|+  |++++++||+++||+++....  +     +      ...+..++.  .+.+...        ..+...|++
T Consensus         7 hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~--~-----~------~~~l~~~~~~~~l~~~~~--------~~~~~~~~~   63 (292)
T 1kw3_B            7 YLGFAVK--DVPAWDHFLTKSVGLMAAGSA--G-----D------AALYRADQRAWRIAVQPG--------ELDDLAYAG   63 (292)
T ss_dssp             EEEEEES--CHHHHHHHHHHTTCCEEEEEE--T-----T------EEEEESSSBSCSEEEEEC--------TTCEEEEEE
T ss_pred             EEEEEeC--CHHHHHHHHHhcCCCEEeecC--C-----C------eEEEEcCCceEEEEEccC--------CCCCccEEE
Confidence            3445555  999999999999999987652  1     1      122344442  2222221        112335899


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEEecCcc---cccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          105 LETE---DVEAAVAKAVSAGAVAEGELAE---GNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       105 ~~V~---dv~~~~~~~~~~G~~i~~~p~~---~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      |.|+   |+++++++++++|+++..+|..   .++   +.+.++|+||+||.|+|++...
T Consensus        64 f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           64 LEVDDAAALERMADKLRQAGVAFTRGDEALMQQRK---VMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHT---CSEEEEEECTTSCEEEEEECCC
T ss_pred             EEECCHHHHHHHHHHHHHcCCeEeecCcccccccC---ceEEEEEECCCCCEEEEEECcc
Confidence            9998   8999999999999998877753   245   5689999999999999998653

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.31  E-value=4.7e-11  Score=95.16  Aligned_cols=107  Identities=11%  Similarity=0.103  Sum_probs=74.6

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .++.+.+.|++++++||+++|||++....  .     +   .  ...+..++  ..|.+...       .  ....|++|
T Consensus       143 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~-----~---~--~~fl~~~~~~~~l~l~~~-------~--~g~~hi~f  201 (310)
T 3b59_A          143 SHIVLHSPNHQDMVKFFTDVLGFKVSDWL--G-----D---F--MCFLRCNSAHHRIAILPG-------P--PCLNHVAY  201 (310)
T ss_dssp             EEEEEEETTHHHHHHHHHHTSCCEEEEEE--T-----T---T--EEEEESSSBSCSEEEEES-------S--SEEEEEEE
T ss_pred             ceEEEecCCHHHHHHHHHhCCCCEEEEee--C-----C---e--EEEEecCCCcceEEEECC-------C--CceEEEEE
Confidence            34444445999999999999999986542  1     1   1  22233332  12333221       1  23458999


Q ss_pred             EeCCHHHH---HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETEDVEAA---VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~dv~~~---~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+|+++.   +++++++|+++...|.+..+  ++.+++||+||+||.|+|++..
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTA--GNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECST--TCCEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccC--CCcEEEEEECCCCCEEEEEeCc
Confidence            99998777   99999999998888876554  0347899999999999998854

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.30  E-value=2.1e-11  Score=96.56  Aligned_cols=114  Identities=9%  Similarity=0.026  Sum_probs=71.9

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.+.|+++|++|| ++||+++......+.  .++.  ......+..++  ..+.+...       ...+...|++|.
T Consensus       149 hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~--~~g~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~hiaf~  216 (305)
T 2wl9_A          149 HIIIREDDVEEATRFY-RLLGLEGAVEYKFAL--PNGA--VGTPVFMHCNDRHHSLAFGVG-------PMDKRINHLMIE  216 (305)
T ss_dssp             EEEECCSCHHHHHHHH-HHHTCEEEECBCEEC--TTSC--EECCEEEESSSSSCSEEECCS-------CCSSSEEEEEEE
T ss_pred             eEEEECCCHHHHHHHH-HHcCCeeeeeEeccc--CCCc--cceEEEEEcCCCceEEEEecC-------CCCCCceEEEEE
Confidence            3444444999999999 999999864321110  0010  00011222222  12222111       112334589999


Q ss_pred             eCC---HHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          107 TED---VEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|   +++++++++++|+++..+|....+   + .+++||+||+||+|+|++..
T Consensus       217 v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~---~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          217 YTHLDDLGYAHDLVRQQKIDVTLQIGKHSN---DEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEEEEECTT---TCCEEEEEECTTSSEEEEEECC
T ss_pred             cCCHHHHHHHHHHHHHcCCCccccCcccCC---CCcEEEEEECCCCCEEEEEeCC
Confidence            998   556789999999999988776655   4 47789999999999999854

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.30  E-value=4.8e-11  Score=93.74  Aligned_cols=114  Identities=12%  Similarity=0.033  Sum_probs=73.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +..|.|+  |++++++||+++||+++......+.  .++.  ......+..++  ..+.+... +      ..+...|++
T Consensus       145 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~--~~g~--~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~hia  211 (292)
T 1kw3_B          145 HFVRCVP--DTAKAMAFYTEVLGFVLSDIIDIQM--GPET--SVPAHFLHCNGRHHTIALAAF-P------IPKRIHHFM  211 (292)
T ss_dssp             EEEEECS--CHHHHHHHHHHTTCCEEEEEEEEEE--ETTE--EEEEEEEESSSBSCSEEEECC-S------CSSSEEEEE
T ss_pred             eEEEecC--CHHHHHHHHHhccCCEEeeeeeccc--CCCc--cceEEEEEECCCcceEEEecC-C------CCCceEEEE
Confidence            4445555  9999999999999999865432110  0010  01122233322  12333221 1      123446899


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCC-eEEEEeee
Q 031118          105 LETEDVEA---AVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGF-TWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~-~~~l~~~~  157 (165)
                      |.|+|+++   ++++++ +|+++..+|...++   | .+.+||+||+|| +|+|++..
T Consensus       212 f~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~---~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          212 LQANTIDDVGYAFDRLD-AAGRITSLLGRHTN---DQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEBSSHHHHHHHHHHHH-HTTCBCBCSEEESS---SCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHHh-CCCceeecCcccCC---CCeEEEEEECCCCCeeEEEEECC
Confidence            99998765   578899 99999888877666   5 467899999999 99999754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.30  E-value=1.2e-11  Score=97.98  Aligned_cols=107  Identities=14%  Similarity=-0.017  Sum_probs=73.8

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .++.+.+.|++++++||+++||+++....  +    .+    ..+  +..++  ..|.+....        .....|++|
T Consensus        11 ~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~----~~----~~~--~~~~~~~~~l~l~~~~--------~~~~~~~~~   70 (302)
T 2ehz_A           11 GYMGISVKDPDAWKSFATDMLGLQVLDEG--E----KD----RFY--LRMDYWHHRIVVHHNG--------QDDLEYLGW   70 (302)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEECCS--C----SS----EEE--EESSSBSCSEEEESSC--------CSEEEEEEE
T ss_pred             eEEEEEeCCHHHHHHHHHhcCCCEEEecc--C----Cc----ceE--EEeCCCceEEEEecCC--------CCCeeEEEE
Confidence            44555555999999999999999986431  1    11    112  23322  234443211        122348899


Q ss_pred             EeC---CHHHHHHHHHHCCCeEEecCcccc---cccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 ETE---DVEAAVAKAVSAGAVAEGELAEGN---GACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 ~V~---dv~~~~~~~~~~G~~i~~~p~~~~---~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|.   |+++++++++++|+++..+|...+   +   +.+.++|+||+||.|+|++..
T Consensus        71 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           71 RVAGKPEFEALGQKLIDAGYKIRICDKVEAQERM---VLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHT---EEEEEEEECTTSCEEEEEEEE
T ss_pred             EECCHHHHHHHHHHHHHCCCcEEECCcccccccc---ceEEEEEECCCCCEEEEEECC
Confidence            885   688889999999999888776532   3   458899999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.29  E-value=8.8e-11  Score=94.82  Aligned_cols=106  Identities=11%  Similarity=0.098  Sum_probs=74.6

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEecCCCCCcccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +-++.+.++|++++++||+++||+++..+.       .+      ...+.. ++   ..+.+...        ......+
T Consensus        12 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-------~~------~~~l~~~~~~~~~~l~l~~~--------~~~g~~~   70 (339)
T 3lm4_A           12 LARAELFSPKPQETLDFFTKFLGMYVTHRE-------GQ------SVYLRGYEDPYPWSLKITEA--------PEAGMGH   70 (339)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTTCCEEEEEE-------TT------EEEEECTTCSSSCSEEEEEC--------SSCEEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHhcCCCEEEEec-------CC------EEEEEecCCCCceEEEEeeC--------CCCCcce
Confidence            334444445999999999999999987652       11      222332 11   22333221        1123458


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+|   ++++++++.++|+++...+. .++   +.+.++|+||+||.|+|+...
T Consensus        71 ~af~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~---~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           71 AAMRTSSPEALERRAKSLTDGNVDGTWSED-QFG---YGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEECC-STT---BCCEEEEECTTCCEEEEECCB
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCceeeccC-CCC---ceEEEEEECCCCCEEEEEEee
Confidence            9999998   88889999999999988776 344   568999999999999998764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.28  E-value=2.6e-11  Score=95.66  Aligned_cols=104  Identities=12%  Similarity=0.044  Sum_probs=73.2

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEE-EeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIG-RSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~-~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      ...|.|+  |++++++||+++||+++.. ..       .+      ...+..++  ..|.+....        .+...|+
T Consensus         8 hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~~-------~~------~~~~~~~~~~~~l~l~~~~--------~~~~~~~   64 (300)
T 2zyq_A            8 YLRIEAT--DMAAWREYGLKVLGMVEGKGAP-------EG------ALYLRMDDFPARLVVVPGE--------HDRLLEA   64 (300)
T ss_dssp             EEEEEES--CHHHHHHHHHHTSCCEECSSCC-------SS------CEEEESSSSSCSEEEEECS--------SCEEEEE
T ss_pred             EEEEEeC--CHHHHHHHHHHccCCEEeccCC-------CC------eEEEEeCCCcEEEEEecCC--------CCCcceE
Confidence            3555555  9999999999999998864 21       11      12233443  234333211        1233489


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEEecCccc---ccccCCceEEEEEcCCCCeEEEEee
Q 031118          104 CLETED---VEAAVAKAVSAGAVAEGELAEG---NGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       104 ~~~V~d---v~~~~~~~~~~G~~i~~~p~~~---~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +|.|+|   +++++++++++|+++..++...   ++   +.+.++|+||+||.|+|++.
T Consensus        65 ~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~---~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           65 GWECANAEGLQEIRNRLDLEGTPYKEATAAELADRR---VDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHT---CSEEEEEECTTCCEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCeEEeCChhhccccc---ceEEEEEECCCCCEEEEEEc
Confidence            999975   7888999999999988776542   34   56899999999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.27  E-value=4.1e-11  Score=94.84  Aligned_cols=115  Identities=11%  Similarity=-0.019  Sum_probs=72.0

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.+.|++++++|| ++||+++......+.  .++.  ......+..++  ..+.+...       ...+...|++|.
T Consensus       152 hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~--~~g~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~hiaf~  219 (302)
T 2ehz_A          152 HCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPL--PNGM--TAELSFMHCNARDHSIAFGAM-------PAAKRLNHLMLE  219 (302)
T ss_dssp             EEEECCSCHHHHHHHH-HHTTCBCCEEEEEEC--TTSC--EEEEEEEBSSSBSCSEEECSC-------CCSSSEEEEEEE
T ss_pred             eEEEEcCCHHHHHHHH-HhcCCeeeeEEeccC--CCCc--ceEEEEEEeCCCCcEEEEecC-------CCCCceeEEEEE
Confidence            4444444999999999 999998754321110  0010  01122222222  11222111       111334589999


Q ss_pred             eCCHHH---HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TEDVEA---AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|+++   ++++++++|+++..+|....+  ++.+++||+||+||+|+|++..
T Consensus       220 v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          220 YTHMEDLGYTHQQFVKNEIDIALQLGIHAN--DKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEEEEECTT--TCCEEEEEECTTSSEEEEEECC
T ss_pred             cCCHHHHHHHHHHHHHCCCcEEeCCcccCC--CCceEEEEECCCCcEEEEEECc
Confidence            998765   578999999999988877654  0347889999999999998763

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.27  E-value=1.7e-10  Score=92.39  Aligned_cols=110  Identities=9%  Similarity=-0.000  Sum_probs=73.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLCL  105 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~~  105 (165)
                      .++.+.+.|++++++|| ++|||++......+    .+   ......+..++  ..+.+...        ......|++|
T Consensus       154 ~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~----~g---~~~~~f~~~~~~~~~~~~~~~--------~~~~~~Hiaf  217 (323)
T 1f1u_A          154 DHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDS----DG---VTYAAWMHRKQTVHDTALTGG--------NGPRMHHVAF  217 (323)
T ss_dssp             EEEEEEESCHHHHHHHH-HHTTCEEEEEEECT----TC---CEEEEEEESSSSSCSEEEEES--------SBSEEEEEEE
T ss_pred             eeEEEecCCHHHHHHHH-HhCCCeEEEEEEcC----CC---cEEEEEEEcCCCcccEEEeCC--------CCCCceEEEE
Confidence            34444444999999999 99999986554322    11   11222233322  12222211        1123458999


Q ss_pred             EeCCHHH---HHHHHHHCCC--eEEecCccc-ccccCCceEEEEEcCCCCeEEEEee
Q 031118          106 ETEDVEA---AVAKAVSAGA--VAEGELAEG-NGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       106 ~V~dv~~---~~~~~~~~G~--~i~~~p~~~-~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      .|+|+++   ++++++++|+  ++...|... .+   +.+++||+||+||.|+|++.
T Consensus       218 ~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~---~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          218 ATHEKHNIIQICDKMGALRISDRIERGPGRHGVS---NAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTT---CCEEEEEECTTCCEEEEEEC
T ss_pred             ECCCHHHHHHHHHHHHHCCCccccccCCCccCCC---CcEEEEEECCCCCEEEEEeC
Confidence            9999999   8999999999  888665543 34   56889999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.22  E-value=1.5e-10  Score=93.31  Aligned_cols=118  Identities=10%  Similarity=0.066  Sum_probs=72.7

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCccc---ccCC-CCceEEEEEEEC----CeEEEEecCCCCCcccccC
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRK---AEQE-LPLISCAQLEIA----GSTFLVSDVSGDSAAAQTV   97 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~---~~g~-~~~v~~~~l~~g----~~~l~l~d~~~~~~~~~~~   97 (165)
                      -+.++.+.+.|+++|++||+++||+++..+...++..   ..+. ..+.....+.++    ...|.+.......  ....
T Consensus        27 ~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~--~~~~  104 (330)
T 3zi1_A           27 RALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG--DYKL  104 (330)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC--CCCB
T ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC--cccc
Confidence            3445555556999999999999999997665433100   0000 012222333332    2344443322110  1223


Q ss_pred             Ccc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           98 GTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        98 ~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +++ .||+|.|+|+   +++++++|+++...|    .     +.++|+||+||.|+|++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~-----~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNARKLEWPLTEVA----E-----GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T-----TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHHHHcCCceeccC----C-----ceEEEECCCCCEEEEEecC
Confidence            344 4999999987   566778899887654    2     3889999999999999865

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.21  E-value=6.9e-10  Score=91.19  Aligned_cols=121  Identities=21%  Similarity=0.237  Sum_probs=83.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecC-CCCCc-------ccccCCcc
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV-SGDSA-------AAQTVGTG  100 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~-~~~~~-------~~~~~~~~  100 (165)
                      |+.+.++|++++++||+++|||++..+...+    .+. .......+..++..|.+... .+...       ....++.+
T Consensus        25 hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~----~~~-~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~g   99 (381)
T 1t47_A           25 AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPE----NGS-RETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDG   99 (381)
T ss_dssp             EEEEECSCHHHHHHHHHHTSCCEEEEEESGG----GTC-CSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSE
T ss_pred             EEEEEECCHHHHHHHHHHcCCCEEEEEEcCC----CCC-ceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcCCc
Confidence            4444444999999999999999998764211    111 01223344557777777653 22210       00122444


Q ss_pred             E-EEEEEeCCHHHHHHHHHHCCCeEEecCcc---cccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 C-VLCLETEDVEAAVAKAVSAGAVAEGELAE---GNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~---~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      + +++|.|+|+++++++++++|++++.+|..   .++   ..+.+.++||+|++++|+++.
T Consensus       100 v~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g---~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A          100 VVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHG---TVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTE---EEEEEEEECSTTCEEEEEEEE
T ss_pred             eEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCC---eEEEEEEecCCCcEEEEEecC
Confidence            4 89999999999999999999999988864   223   346889999999999999875

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.20  E-value=4.5e-10  Score=90.86  Aligned_cols=111  Identities=9%  Similarity=0.050  Sum_probs=71.9

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccE-EE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGC-VL  103 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~-~i  103 (165)
                      .-++.+.+.|++++.+||+++|||++....        +.     ...+..++  ..|.+..... ..+......++ |+
T Consensus       154 l~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~--------~~-----~~~~~~g~~~~~l~l~~~~~-~~~~~~g~g~~~Hi  219 (335)
T 3oaj_A          154 FGGATLLSEQPDKTADLLENIMGLERVGKE--------GD-----FVRYRSAGDIGNVIDLKLTP-IGRGQMGAGTVHHI  219 (335)
T ss_dssp             EEEEEEECSSHHHHHHHHHHTSCCEEEEEE--------TT-----EEEEECSSSSSCEEEEESSC-CCBCBCSBTEEEEE
T ss_pred             ccceEEEECCHHHHHHHHHHHhCCEEeecc--------CC-----EEEEEeCCCCcEEEEEeCCC-CCcCCCCCcceEEE
Confidence            344555555999999999999999987652        11     22333343  3444433211 11011122334 89


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          104 CLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       104 ~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +|.|+|   ++++++++.+.|..+. ++.+..+   . +.+||+||+||+|||++.
T Consensus       220 Af~v~d~~~l~~~~~~L~~~G~~~~-~~~~r~~---~-~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          220 AWRANDDEDQLDWQRYIASHGYGVT-PVRDRNY---F-NAIYFREHGEILFEIATD  270 (335)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCC-CCEECSS---S-EEEEEECTTSCEEEEEES
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCCcc-ccccCCc---E-EEEEEECCCCcEEEEEeC
Confidence            999998   5557899999998754 3333333   3 789999999999999986

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.20  E-value=2.9e-10  Score=92.26  Aligned_cols=127  Identities=13%  Similarity=0.093  Sum_probs=81.7

Q ss_pred             eEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCCCCC--cc-----c
Q 031118           26 MKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVSGDS--AA-----A   94 (165)
Q Consensus        26 ~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~~~~--~~-----~   94 (165)
                      -..++.+.++  |++++++||+++|||+.....+...   ..  ..+....+..+  +..|.+.......  .+     .
T Consensus       158 ~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~---~~--~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          158 GIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVV---GA--QAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEE---TT--EEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             eEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeecc---CC--cceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            4567888888  9999999999999999875432110   00  01122334443  2456554332110  00     0


Q ss_pred             ccCCcc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccc--c-cc---C----Cc----eEEEEEcCCCCeEEEEeee
Q 031118           95 QTVGTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGN--G-AC---C----GE----RVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        95 ~~~~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~--~-~~---~----G~----~~~~~~DP~G~~~~l~~~~  157 (165)
                      ...+.+ .||+|.|+|++++++++.++|+.++..|...+  + ..   +    +.    +..+++||+|++|+|++..
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            112334 49999999999999999999999888874322  1 00   0    11    3789999999999999843

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.18  E-value=1.4e-09  Score=89.11  Aligned_cols=105  Identities=18%  Similarity=0.196  Sum_probs=71.8

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC----eEEEEecCCCCCcccccCCccEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG----STFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~----~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      ...|.|+  |++++++||+++||+++..+.       ++      ...|..++    ..|.+...        ....-.+
T Consensus        20 hV~l~V~--DLe~s~~FY~dvLGL~~~~~~-------~~------~~~lr~~~~~~~~~l~l~~~--------~~~gl~~   76 (365)
T 4ghg_A           20 YAELVVT--DLAKSRNFYVDVLGLHVSYED-------EN------QIYLRSFEEFIHHNLVLTKG--------PVAALKA   76 (365)
T ss_dssp             EEEEEES--CHHHHHHHHTTTTCCEEEEEC-------SS------EEEEECTTCCSSCSEEEEEC--------SSCEEEE
T ss_pred             EEEEEeC--CHHHHHHHHhhCCCCEEEEEc-------CC------EEEEEeCCCCcceEEEeccC--------CCCCcce
Confidence            4455555  999999999999999987652       11      23333322    12323221        1123348


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcc-cccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAE-GNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~-~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|.+   ++++.+++.++|+.+...+.. ..+   +.+.++|+||+||.|+|+...
T Consensus        77 ~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~---~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           77 MAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKG---IGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTT---BCSEEEEECTTSCEEEEECCB
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCcceeccccccCC---CceEEEEECCCCCEEEEEEEe
Confidence            9999976   666789999999998876543 334   458899999999999998654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.11  E-value=1.8e-09  Score=89.36  Aligned_cols=124  Identities=16%  Similarity=0.130  Sum_probs=86.6

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecC-CCCCcc----cccCCccE-
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV-SGDSAA----AQTVGTGC-  101 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~-~~~~~~----~~~~~~~~-  101 (165)
                      -|+.+-++|++++++||+++|||+.......+    ++. .......++.|+..|.|... .++..+    ...++.++ 
T Consensus        13 ~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e----~g~-r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~   87 (393)
T 3isq_A           13 HSVTFWVGNAKQAASFYCSKMGFEPLAYRGLE----TGS-REVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVK   87 (393)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHCCEEEEEESGG----GTC-CSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEE
T ss_pred             eEEEEEECCHHHHHHHHHHhcCCEEEEEEcCC----CCc-EEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEE
Confidence            34444444999999999999999998764322    121 11223345668888887653 232101    12245555 


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +++|.|+|+++++++++++|++++.+|...... .| .+...+++|.|+++.|+...
T Consensus        88 ~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~-~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           88 DIAFEVEDCDYIVQKARERGAKIMREPWVEQDK-FGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             EEEEEEECHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCeEecCccccccC-CceeEEEEEEeCCCcEEEEeccc
Confidence            799999999999999999999999999765430 03 37889999999999998754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.08  E-value=3.8e-09  Score=88.13  Aligned_cols=122  Identities=18%  Similarity=0.125  Sum_probs=81.0

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CCC----------cc---
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GDS----------AA---   93 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~~----------~~---   93 (165)
                      -|+.+.|+|+++|++||+++|||++..+.+.+    ++. .......+..++..|.|.... +..          .+   
T Consensus        27 ~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~----~g~-~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~~~  101 (424)
T 1sqd_A           27 HHIEFWCGDATNVARRFSWGLGMRFSAKSDLS----TGN-MVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPS  101 (424)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCEEEEEESGG----GTC-SSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             EEEEEEECCHHHHHHHHHHcCCCEEEEEEcCC----CCc-eeEEEEEEcCCCEEEEEecCCCCccccccccccccccccc
Confidence            34444445999999999999999988764322    111 112233345577777665431 110          00   


Q ss_pred             ---------cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           94 ---------AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        94 ---------~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                               ...++.++ +|+|.|+|+++++++++++|++++.+|....+   +.+...+++|.|+++.|+++.
T Consensus       102 ~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~---~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          102 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE---AVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT---TEEEEEEEEETTEEEEEEEEC
T ss_pred             ccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC---ceEEEEEEcCCCcEEEEEecC
Confidence                     01223444 89999999999999999999999998876544   446667777777777777654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.08  E-value=4.3e-09  Score=85.30  Aligned_cols=119  Identities=18%  Similarity=0.139  Sum_probs=82.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecC-CCCCc---ccccCCccE-E
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV-SGDSA---AAQTVGTGC-V  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~-~~~~~---~~~~~~~~~-~  102 (165)
                      -+|.+.++|++++++||+++|||+++......    ++     .+..+..++..|.+... .+...   .....+.++ +
T Consensus         7 ~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~----~g-----~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~   77 (357)
T 2r5v_A            7 DYVEMYVENLEVAAFSWVDKYAFAVAGTSRSA----DH-----RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVAD   77 (357)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHCCEEEEEEEET----TE-----EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEE
T ss_pred             EEEEEEECCHHHHHHHHHHcCCCeEEEEEcCC----Cc-----eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEE
Confidence            34444555999999999999999987653211    11     23445567777766542 22110   011223444 8


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++|.|+|++++++++.++|+++..+|.....  +..+...|+||+|+.++|+++.
T Consensus        78 iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           78 IAMATSDVAAAYEAAVRAGAEAVRAPGQHSE--AAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEECCC---CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEEECCHHHHHHHHHHcCCeEeECcEecCC--CeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999999988764322  0347889999999999999864

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.95  E-value=3.2e-08  Score=82.38  Aligned_cols=122  Identities=20%  Similarity=0.135  Sum_probs=80.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-CCC------------cc-
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-GDS------------AA-   93 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~~~------------~~-   93 (165)
                      -+|.+.|+|++++++||+++|||++..+...+    +|. .......+..|+..|.|.... +..            .+ 
T Consensus        33 ~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~----~G~-~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~~~  107 (418)
T 1sp8_A           33 HHVELWCADAASAAGRFSFGLGAPLAARSDLS----TGN-SAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA  107 (418)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCCEEEEESGG----GTC-CSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCC----CCC-cceEEEEEeeCCEEEEEecCCCCcccccccccccccchhH
Confidence            44555555999999999999999987664322    121 112344456688777765432 100            00 


Q ss_pred             ---cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           94 ---AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        94 ---~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                         ...++.++ +|+|.|+|++++++++++.|++++.+|.....   +.+...+++|.|.++.|+.+.
T Consensus       108 ~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~---~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          108 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR---GFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET---TEEEEEEEEETTEEEEEEECC
T ss_pred             HHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC---ceEEEEEecCCCEEEEEEccC
Confidence               11233455 89999999999999999999999988865423   345566667777777766654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=98.68  E-value=4.6e-07  Score=74.25  Aligned_cols=131  Identities=14%  Similarity=0.124  Sum_probs=80.8

Q ss_pred             eeEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE--CCeEEEEecCCC-C-Ccc-----
Q 031118           25 GMKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI--AGSTFLVSDVSG-D-SAA-----   93 (165)
Q Consensus        25 ~~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~--g~~~l~l~d~~~-~-~~~-----   93 (165)
                      .-+-|+.+.++  |++++++||+++|||+.....+....  ......+....+..  +...|.+....+ . ...     
T Consensus       183 ~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i--~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l  260 (381)
T 1t47_A          183 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDI--ATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL  260 (381)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHH--HTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCccee--ccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHH
Confidence            34568888888  99999999999999988654210000  00001123333333  233565544321 1 000     


Q ss_pred             cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccc------cCC--------ceEEEEEcCCCCeEEEEeee
Q 031118           94 AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGA------CCG--------ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        94 ~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~------~~G--------~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ....+.++ ||+|.|+|+++++++++++|+.++..|......      ..+        ....+-+||+|+++++++..
T Consensus       261 ~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~~  339 (381)
T 1t47_A          261 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKP  339 (381)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBCC
T ss_pred             HHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEeccC
Confidence            01234454 999999999999999999999998877543210      000        12456699999999998754

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.66  E-value=1.3e-07  Score=76.75  Aligned_cols=127  Identities=13%  Similarity=0.003  Sum_probs=78.3

Q ss_pred             eEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEE--ECCeEEEEecC-CCCCcc-----cc
Q 031118           26 MKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLE--IAGSTFLVSDV-SGDSAA-----AQ   95 (165)
Q Consensus        26 ~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~--~g~~~l~l~d~-~~~~~~-----~~   95 (165)
                      -+.|+.+.++  |++++++||+++|||+.....+.+.   .. . .+....+.  .++..|.+... .....+     ..
T Consensus       158 ~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~---~~-~-~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          158 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKG---EY-T-GLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEEC---SS-C-EEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             EECceEEeechhhHHHHHHHHHHhhCCceeeEEEecc---CC-c-ceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHh
Confidence            4567888888  9999999999999999876543221   00 0 01111112  23446666443 111110     01


Q ss_pred             cCCcc-EEEEEEeCCHHHHHHHHHHCCCeEEe-cCccccc------ccCCce--------EEEEEc----CCCCeEEEEe
Q 031118           96 TVGTG-CVLCLETEDVEAAVAKAVSAGAVAEG-ELAEGNG------ACCGER--------VGKVKD----PYGFTWLICS  155 (165)
Q Consensus        96 ~~~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~-~p~~~~~------~~~G~~--------~~~~~D----P~G~~~~l~~  155 (165)
                      ..+.+ .||+|.|+|++++++++.++|.+++. .|.....      ..+|..        +.+-+|    |+|++|+|++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            12344 59999999999999999999999887 6621100      000221        356688    8899999987


Q ss_pred             ee
Q 031118          156 PV  157 (165)
Q Consensus       156 ~~  157 (165)
                      ..
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.65  E-value=2.4e-07  Score=75.14  Aligned_cols=120  Identities=11%  Similarity=0.116  Sum_probs=78.9

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc---cccc
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA---AAQT   96 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~---~~~~   96 (165)
                      |+++.. .-|+.+.++|++++.+|| ++|||+++.+..      ...     +..+..++..|.+... +...   ....
T Consensus         7 ~~~i~~-l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~------~~~-----~~l~~~g~~~l~l~~~-~~~~~~~~~~~   72 (357)
T 1cjx_A            7 PMGLMG-FEFIEFASPTPGTLEPIF-EIMGFTKVATHR------SKN-----VHLYRQGEINLILNNE-PNSIASYFAAE   72 (357)
T ss_dssp             TTCEEE-EEEEEEECSSTTSSHHHH-HHTTCEEEEEES------SSS-----EEEEEETTEEEEEECC-SSSHHHHHHHH
T ss_pred             Ccccce-EEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC------Cee-----EEEEecCCEEEEEECC-CCchhhhhhhh
Confidence            344443 344545555999999999 799999876531      111     3344557777766542 2210   0112


Q ss_pred             CCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           97 VGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        97 ~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++.++ +++|.|+|++++++++.+.|+++..+|.. +.   ..+...+++|.|.++.|+.+.
T Consensus        73 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~-~g---~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           73 HGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG-PM---ELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             HSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC-TT---CBCCCEEECGGGCEEEEECCC
T ss_pred             cCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC-CC---cEEEEeeeCCCCeEEEEECCC
Confidence            34454 89999999999999999999998877633 22   235667888888888887654

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.65  E-value=1.8e-06  Score=70.52  Aligned_cols=111  Identities=10%  Similarity=0.007  Sum_probs=67.7

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.++|++++..||++ |||.+......+    ++   ....+.+..++.  .+.+..        ...+.--|++|+
T Consensus       155 HV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~----~g---~~~~~f~~~~~~hH~la~~~--------~~~~~lhHvaf~  218 (365)
T 4ghg_A          155 HFNQVTPDVPRGRKYLED-LGFRVTEDIQDD----EG---TTYAAWMHRKGTVHDTALTG--------GNGPRLHHVAFS  218 (365)
T ss_dssp             EEEEEESCHHHHHHHHHH-TTCEEEEEEECT----TS---CEEEEEEESSSSSCSEEEEE--------SSBSEEEEEEEE
T ss_pred             EEEEeecCHHHHHHHHHh-cCCEEEEEEecC----CC---ceeEEeeecCCcccceeeec--------CCCCceeEEEEe
Confidence            444444499999999975 999876544322    11   122223332221  122211        111223489999


Q ss_pred             eCCHHHH---HHHHHHCCC--eEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          107 TEDVEAA---VAKAVSAGA--VAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       107 V~dv~~~---~~~~~~~G~--~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+|+++.   ++++.+.|.  .+...|.+..-  +...+.||+||+||++|+...-
T Consensus       219 v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~--~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          219 THEKHNIIQICDKMGALRISDRIERGPGRHGV--SNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECST--TCCEEEEEECTTCCEEEEEECC
T ss_pred             cCCHHHHHHHHHHHHhCCCCceeEeCCCccCC--CCcEEEEEECCCCceEEEEcCC
Confidence            9998876   567778886  35556655432  0347789999999999998753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.57  E-value=1.6e-06  Score=66.94  Aligned_cols=115  Identities=14%  Similarity=0.120  Sum_probs=71.4

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-e-EEEEecCCCCCcccccC
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-S-TFLVSDVSGDSAAAQTV   97 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~-~l~l~d~~~~~~~~~~~   97 (165)
                      .+++..++|.|.|.  |.+++++||+++|||++....        +.     .+.|..++ . .|.+.+ .|... ....
T Consensus         6 ~~~~~~~~p~LrV~--nr~~~~~FY~~vlG~kll~ee--------~~-----~a~lg~~~~~~~L~lEE-sp~~~-~~~~   68 (244)
T 3e0r_A            6 VNQIVRIIPTLKAN--NRKLNETFYIETLGMKALLEE--------SA-----FLSLGDQTGLEKLVLEE-APSMR-TRKV   68 (244)
T ss_dssp             CCCEEEEEEEEEES--SHHHHHHHHTTTTCCEEEEEC--------SS-----EEEEECTTCCEEEEEEE-CCTTT-CBCC
T ss_pred             ccceEEEeeEEEEC--CHHHHHHHHHhccCcEEeecc--------Cc-----EEEeecCCCcceEEEEe-CCCcc-cccc
Confidence            45688899999999  999999999999999987652        21     34444333 2 344433 33211 1112


Q ss_pred             CccEE---EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           98 GTGCV---LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        98 ~~~~~---i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .+-.|   |.|.|.|.+++ ..+++++..+-. +.....   | +-+|+.||+||.|+|....
T Consensus        69 ~Glkh~a~i~i~vp~~~el-~~lL~~~~~~~~-~~~gdh---g-yA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           69 EGRKKLARLIVKVENPLEI-EGILSKTDSIHR-LYKGQN---G-YAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             CSSCSEEEEEEEESSHHHH-HHHHTTCSCCSE-EEECSS---S-EEEEEECTTCCEEEEECCS
T ss_pred             cccceeeeEEEEcCCHHHH-HHHHhccccccc-ccccCC---c-EEEEEECCCCCeEEEEEcC
Confidence            22234   47999996665 334444433211 011112   4 5789999999999998743

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.38  E-value=5.5e-06  Score=68.45  Aligned_cols=104  Identities=13%  Similarity=0.141  Sum_probs=68.0

Q ss_pred             ceeEEEEEEecCC--HHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE--CCeEEEEecCCC--CCcc----
Q 031118           24 TGMKPQLLVEAPK--ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI--AGSTFLVSDVSG--DSAA----   93 (165)
Q Consensus        24 ~~~~~~l~v~~~D--~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~--g~~~l~l~d~~~--~~~~----   93 (165)
                      -..+.|+.+.++|  ++++++||+++|||+.....+..+.. ... ..+....+..  +...|.|....+  ...+    
T Consensus       171 l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~-~~~-~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~f  248 (393)
T 3isq_A          171 LEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVH-TEY-SSLRSIVVANYEESIKMPINEPAPGKKKSQIQEY  248 (393)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSB-CSS-CEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHH
T ss_pred             eeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccc-cCC-CcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHH
Confidence            3467888888877  99999999999999987664311100 110 1233333333  235666654332  1110    


Q ss_pred             -cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCc
Q 031118           94 -AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELA  129 (165)
Q Consensus        94 -~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~  129 (165)
                       ....+.++ ||+|.|+|+++++++++++|++++.+|.
T Consensus       249 L~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          249 VDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             HHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             HHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence             11235565 9999999999999999999999998774

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.21  E-value=1.5e-05  Score=66.25  Aligned_cols=102  Identities=11%  Similarity=0.110  Sum_probs=63.5

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE--CCeEEEEecCCC---CCcc-----c
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI--AGSTFLVSDVSG---DSAA-----A   94 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~--g~~~l~l~d~~~---~~~~-----~   94 (165)
                      .-+.|+.+.++|++++++||+++|||+.....+.++.  ......+....+..  +...|.+....+   ....     .
T Consensus       198 ~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~--~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~  275 (418)
T 1sp8_A          198 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDV--GTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLD  275 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC----------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             ceEeeEEEecCCHHHHHHHHHHHcCCEEEEEeccccc--ccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhh
Confidence            3556777777799999999999999998766532210  00000122222332  234565544321   1110     1


Q ss_pred             ccCCccE-EEEEEeCCHHHHHHHHHH----CCCeEEecC
Q 031118           95 QTVGTGC-VLCLETEDVEAAVAKAVS----AGAVAEGEL  128 (165)
Q Consensus        95 ~~~~~~~-~i~~~V~dv~~~~~~~~~----~G~~i~~~p  128 (165)
                      ...+.++ ||+|.|+|++++++++.+    +|+.++..|
T Consensus       276 ~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          276 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             ccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            1235565 999999999999999999    799988765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.18  E-value=1.5e-05  Score=66.38  Aligned_cols=131  Identities=13%  Similarity=0.054  Sum_probs=76.8

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE--CCeEEEEecCC----CCCcc----c
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI--AGSTFLVSDVS----GDSAA----A   94 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~--g~~~l~l~d~~----~~~~~----~   94 (165)
                      .-+.|+.+.++|++++++||+++|||+.....+.++.  .+....+....+..  +...|.+....    .....    .
T Consensus       201 ~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~--~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~  278 (424)
T 1sqd_A          201 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDV--GTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLE  278 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC----------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             ceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEccccc--ccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhh
Confidence            3566777777799999999999999998776532210  00000122222332  23456554432    11110    1


Q ss_pred             ccCCccE-EEEEEeCCHHHHHHHHHH----CCCeEEecC-ccccc---c-------------cCCceEEEEEcCCCCeEE
Q 031118           95 QTVGTGC-VLCLETEDVEAAVAKAVS----AGAVAEGEL-AEGNG---A-------------CCGERVGKVKDPYGFTWL  152 (165)
Q Consensus        95 ~~~~~~~-~i~~~V~dv~~~~~~~~~----~G~~i~~~p-~~~~~---~-------------~~G~~~~~~~DP~G~~~~  152 (165)
                      ...+.++ ||+|.|+|++++++++.+    +|++++..| .....   +             .--....+=+|.+|.+++
T Consensus       279 ~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llq  358 (424)
T 1sqd_A          279 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQ  358 (424)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEE
T ss_pred             hcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEE
Confidence            1234555 999999999999999999    899988765 22100   0             000123455777888888


Q ss_pred             EEeee
Q 031118          153 ICSPV  157 (165)
Q Consensus       153 l~~~~  157 (165)
                      |++..
T Consensus       359 ift~~  363 (424)
T 1sqd_A          359 IFTKP  363 (424)
T ss_dssp             EEBCC
T ss_pred             EEccc
Confidence            87644

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.52  E-value=0.00017  Score=65.05  Aligned_cols=115  Identities=12%  Similarity=0.061  Sum_probs=69.2

Q ss_pred             EEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEe-c-C-CCCC--------c-ccc
Q 031118           30 LLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVS-D-V-SGDS--------A-AAQ   95 (165)
Q Consensus        30 l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~-d-~-~~~~--------~-~~~   95 (165)
                      ..-+..-..++++||++.++++.....        .  .++....|...+.  .|.+. + . ....        . ...
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (941)
T 3opy_B           16 FAPNISLLQASIDFYTNFLGFAIRKNS--------N--QKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRS   85 (941)
T ss_dssp             ECCC-CC-HHHHHHHHHTTCCEECSSC--------S--CCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC--
T ss_pred             EeCCHHHHHHHHHHHHhhccceecccc--------C--CcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhcc
Confidence            333445899999999999999654321        1  1344455533232  23321 1 1 0000        0 000


Q ss_pred             c-----CCccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           96 T-----VGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        96 ~-----~~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      .     .+...|+.|.+.|++++.+++.+.+..+..-|.+.     +...+|+.||.||.|+|.+...+
T Consensus        86 ~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~-----~~~e~yt~DPlGNvIgfs~~~~~  149 (941)
T 3opy_B           86 LYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI-----SPFEVYTVDPLGSLIGFSGFKNP  149 (941)
T ss_dssp             --------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC-----SCEEECCSSCCEEEECC-CCSSS
T ss_pred             cccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcC-----CCceEEeECCCCCEEEEeccCCc
Confidence            0     12233999999999999999999888777667655     55799999999999999987643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=85.58  E-value=2.1  Score=32.80  Aligned_cols=44  Identities=16%  Similarity=0.032  Sum_probs=29.1

Q ss_pred             EEEEEeC--CHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          102 VLCLETE--DVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       102 ~i~~~V~--dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      .+-|.|+  |+.+..+++.+.|.-+.     .     ...+..+.||.|+.|.|..
T Consensus       198 ~l~~~v~~~dl~~l~~~L~~~g~~id-----k-----k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          198 MLKFLVNELDIASLRQKFESTEYFIP-----K-----SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             EEEEEESSCCHHHHHHHTTTSCEECC-----T-----TCCEEEEECTTSCEEEEEE
T ss_pred             EEEEEeCHHHHHHHHHHHHhCCceEc-----c-----cCCEEEEECCCCCEEEEEE
Confidence            4555554  46666777776654211     1     3368899999999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=82.30  E-value=6.7  Score=25.06  Aligned_cols=53  Identities=19%  Similarity=0.094  Sum_probs=35.2

Q ss_pred             EEEEEEeCCHHHHHHHHHH-CCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDVEAAVAKAVS-AGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~-~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|+.|.|.|++++.+-..+ .|.++.........   +.+.+++.. .|..++|+++.
T Consensus         7 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~---~~~~~~~~~-~~~~~~l~~~~   60 (134)
T 3rmu_A            7 NHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEH---GVSVVFVNL-GNTKMELLHPL   60 (134)
T ss_dssp             EEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGG---TEEEEEEEC-SSSEEEEEEEC
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCC---CEEEEEEec-CCEEEEEEecC
Confidence            4899999999999666655 68876643222222   445666655 56778887754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=81.99  E-value=4.8  Score=30.48  Aligned_cols=26  Identities=4%  Similarity=-0.125  Sum_probs=20.2

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIG   54 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~   54 (165)
                      -++.+.++|++++.+|| ++||++...
T Consensus       160 ghV~L~v~d~~~~~~fl-~~LG~~~~~  185 (252)
T 3pkv_A          160 GEINITTSDVEQAATRL-KQAELPVKL  185 (252)
T ss_dssp             EEEEEECSCHHHHHHHH-HHTTCCCCG
T ss_pred             eeEEEEeCCHHHHHHHH-HHcCCCccc
Confidence            34445555999999999 999998753

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=81.90  E-value=7.1  Score=25.67  Aligned_cols=55  Identities=9%  Similarity=-0.083  Sum_probs=36.6

Q ss_pred             cEEEEEEeCCHHHHHHHHH-HCCCeEEecCcccccccCCceEEEEEcCCC-----CeEEEEeee
Q 031118          100 GCVLCLETEDVEAAVAKAV-SAGAVAEGELAEGNGACCGERVGKVKDPYG-----FTWLICSPV  157 (165)
Q Consensus       100 ~~~i~~~V~dv~~~~~~~~-~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G-----~~~~l~~~~  157 (165)
                      -.|+.|.|.|++++.+-.. ..|.++.........   +.+.++++.+++     ..++|+++.
T Consensus        10 ~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A           10 IDHVAYACPDADEASKYYQETFGWHELHREENPEQ---GVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTT---TEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCceeeecccCCCC---CeEEEEEEcCCCCcCcceEEEEeecC
Confidence            3489999999999855443 357776644322112   346778887775     788888754

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=80.63  E-value=6.2  Score=25.62  Aligned_cols=56  Identities=16%  Similarity=0.159  Sum_probs=36.7

Q ss_pred             cEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       100 ~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      -.|+.|.|.|++++.+-....|.++.......+.  .+.+.+++.. .|..++|+++..
T Consensus         8 i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~--~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            8 VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEV--RKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCEECSCCEEETT--TTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eCEEEEEECCHHHHHHHHHHcCCeeecceeccCC--cceEEEEEeC-CCEEEEEEecCC
Confidence            3489999999999954444688887654322222  0446666665 577888887653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=80.35  E-value=6.7  Score=26.81  Aligned_cols=53  Identities=8%  Similarity=-0.017  Sum_probs=36.3

Q ss_pred             EEEEEEeCCHHHHHHHHHH-CCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDVEAAVAKAVS-AGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~-~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      -|+.|.|.|++++.+-..+ .|.++.........   +.+.+++.. .|..++|+++.
T Consensus        10 ~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~-g~~~l~l~~~~   63 (161)
T 3oa4_A           10 DHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQ---GVKIAFLEI-GESKIELLEPL   63 (161)
T ss_dssp             EEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGG---TEEEEEEEE-TTEEEEEEEES
T ss_pred             CEEEEEECCHHHHHHHHHHccCCeEeeeeccCCC---CeEEEEEeC-CCeEEEEEeEC
Confidence            4899999999999766655 78887654322223   446677765 45678887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	165
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-20
d1u7ia_	134	d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudom	6e-19
d1tsja_	129	d.32.1.7 (A:) Hypothetical protein MW1090 {Staphyl	5e-16
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	5e-16
d1u69a_	156	d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudom	2e-06
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	6e-06

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.6 bits (195), Expect = 2e-20
 Identities = 64/135 (47%), Positives = 81/135 (60%), Gaps = 5/135 (3%)

Query: 21  ASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS 80
             FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS
Sbjct: 2   LVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS 61

Query: 81  TFLVSDVSGD--SAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGE 138
           +F+V DVS     + A++ G+G    L T+D EAAVAKAV AGAV               
Sbjct: 62  SFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA---EVELG 118

Query: 139 RVGKVKDPYGFTWLI 153
             GKV DP+G TW+ 
Sbjct: 119 FKGKVTDPFGVTWIF 133

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 75.9 bits (186), Expect = 6e-19
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 3/126 (2%)

Query: 28  PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDV 87
           P L+ +  +A  A+ FY + F   EI +      +       +  A   +   +    D 
Sbjct: 8   PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDS 67

Query: 88  SGDSAAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPY 147
               A   T      +  E+      +A+A+S G  A   L +       +R   + D +
Sbjct: 68  HVRHAFDFTPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGF---SQRFAWLADRF 124

Query: 148 GFTWLI 153
           G +W +
Sbjct: 125 GVSWQL 130

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

 Score = 68.1 bits (166), Expect = 5e-16
 Identities = 14/120 (11%), Positives = 35/120 (29%), Gaps = 7/120 (5%)

Query: 37  ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQT 96
           A +AV+ Y + F   EI    +       +   +  +   + G  F+  D +  +    +
Sbjct: 16  AEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTELPIS 75

Query: 97  VGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP 156
           +        +       +   +                        V+D +G ++ +  P
Sbjct: 76  LFVTV----KDTIEMERLFNGLKDEGAILMPKTN---MPPYREFAWVQDKFGVSFQLALP 128

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 68.6 bits (167), Expect = 5e-16
 Identities = 18/122 (14%), Positives = 35/122 (28%), Gaps = 8/122 (6%)

Query: 37  ATDAVQFYKTAFGAVEIGRSVETKRKAEQELP-----LISCAQLEIAGSTFLVSDVSGDS 91
             +A   Y    G                ++P      I  A+L +     + SD     
Sbjct: 14  CREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY 73

Query: 92  AAAQTVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTW 151
                 G    L ++++     +  A++ G   +  L            G   D +G  W
Sbjct: 74  PYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGP---TFWAASFGMFTDRFGVAW 130

Query: 152 LI 153
           ++
Sbjct: 131 MV 132

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 17/122 (13%), Positives = 31/122 (25%), Gaps = 15/122 (12%)

Query: 37  ATDAVQFYKTAFGAVEIGRSVETKRKAEQELP-LISCAQLEIAGSTFLVSDVSGDSAAAQ 95
           A +A  FY   F    +                 +   +  + G   L  +  G +    
Sbjct: 13  ALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNG-GPAFRHS 71

Query: 96  TVGTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS 155
              +  V   +  + +      V  G                   G  +D +G +W I  
Sbjct: 72  EAFSFQVATDDQAETDRLWNAIVDNGGEES-------------ACGWCRDKWGISWQITP 118

Query: 156 PV 157
            V
Sbjct: 119 RV 120

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 41.0 bits (95), Expect = 6e-06
 Identities = 14/112 (12%), Positives = 26/112 (23%), Gaps = 18/112 (16%)

Query: 40  AVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGT 99
                +          +                AQ  I     ++S         +   +
Sbjct: 16  VCADLEHILDKKADYAN-------------DGFAQFTIGSHCLMLSQN--HLVPLENFQS 60

Query: 100 GCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTW 151
           G ++ +E EDV+    +    G               G     V+ P G   
Sbjct: 61  GIIIHIEVEDVDQNYKRLNELGIKVLH---GPTVTDWGTESLLVQGPAGLVL 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	165
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.94
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.91
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.9
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	99.9
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.88
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.83
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.78
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.75
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.74
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.73
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	99.72
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.72
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.7
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.7
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.68
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.67
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.67
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.64
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.6
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.6
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.58
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.57
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.57
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.56
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.56
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.55
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.54
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.52
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.51
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.5
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.48
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.48
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.34
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.25
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.12
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.56
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.53
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.44
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.35
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.0
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	81.69

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.9e-26  Score=162.34  Aligned_cols=133  Identities=48%  Similarity=0.680  Sum_probs=103.1

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc--ccccC
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA--AAQTV   97 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~--~~~~~   97 (165)
                      |..++++.|+|.|.++|+++|++||+++||+++..+...++.........+.|+.|.+++..+++.+..+...  +....
T Consensus         1 ~~~~~~~~P~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1xy7a_           1 HLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSE   80 (135)
T ss_dssp             CCCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTT
T ss_pred             CcceeeEccEEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCC
Confidence            3457899999999999999999999999999987765333211122234688999999998888766543221  23445


Q ss_pred             CccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           98 GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        98 ~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +..++|++.|+|+++++++++++|++++++|...+|   |.++++|+|||||+|+|.+
T Consensus        81 ~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~---g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          81 GSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE---LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             SCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHH---TTEEEEEECTTSCEEEEEC
T ss_pred             CcceEEEEeecCcceeEEEeecccceEecCcccccc---cCEEEEEECCCCCEEEEeC
Confidence            567899999999999999999999999999999999   9999999999999999975

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=4.8e-23  Score=145.46  Aligned_cols=128  Identities=16%  Similarity=0.241  Sum_probs=103.5

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc-----cccCCCCceEEEEEEECCeEEEEecCCCCCcccccC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR-----KAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTV   97 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~-----~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~   97 (165)
                      |+ ++|+|.+.+ |+++|++||+++||+++......++.     ......+++.|+.|.+++..+++.+..+..  ....
T Consensus         2 ~~-i~pyl~f~g-~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~--~~~~   77 (137)
T d1u6la_           2 LQ-IVPYLIFNG-NCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY--PYEG   77 (137)
T ss_dssp             CE-EEEEEEESS-CHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS--CCCC
T ss_pred             ce-EEEEEEECC-CHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc--cccC
Confidence            44 899999975 99999999999999999876543321     001123579999999999999888765442  2445


Q ss_pred             CccEEEEEEeCCHHHH--HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           98 GTGCVLCLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        98 ~~~~~i~~~V~dv~~~--~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +++.+++|.+++.|+.  +.+++++|++++++|++++|   |.++++|+||+|+.|+|..+.
T Consensus        78 ~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~w---G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          78 IKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFW---AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETT---EEEEEEEECTTSCEEEEEESC
T ss_pred             CCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCC---CcEEEEEECCCCCEEEEEecC
Confidence            6788899999876654  88999999999999999999   999999999999999998653

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.9e-22  Score=142.42  Aligned_cols=125  Identities=18%  Similarity=0.226  Sum_probs=102.4

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEe-ecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRS-VETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~-~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      ++.|+|.+.+.|+++|++||+++||.+.+... ..++. ..+..+.++|+.|++++..|++.|..+..  ....++++++
T Consensus         5 ~l~PyL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~-~~~~~g~v~ha~l~i~~~~i~~~d~~~~~--~~~~~~~~s~   81 (134)
T d1u7ia_           5 RVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAE-GPGPEGSVLKALFRLGDQSVHCIDSHVRH--AFDFTPAFSF   81 (134)
T ss_dssp             EEEEEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTT-CSSCTTSEEEEEEEETTEEEEEEEESSCC--SCCCCTTEEE
T ss_pred             cEEEEEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCC-CCCCCCCEEEEEEEECCEEEEEecCCCCC--CCCCCCceEE
Confidence            59999999877899999999999999765544 22221 12234579999999999999998876542  2455678899


Q ss_pred             EEEeCCHHHH--HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          104 CLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       104 ~~~V~dv~~~--~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +|.+++.|+.  +.+++++|+++++++++.+|   |.++++|+||+|+.|+|.-
T Consensus        82 ~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~---g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          82 FVDCESNAQIERLAEALSDGGKALMPLGDYGF---SQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             EEECCCHHHHHHHHHHHHTTSEEEEEEECCSS---SSEEEEEECTTSCEEEEEE
T ss_pred             EEEeccHHHHHHHHHHHhcCCEEecCcccccc---cceEEEEECCCCCEEEEEc
Confidence            9999987776  88889999999999999999   9999999999999999963

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.90  E-value=1.1e-22  Score=142.85  Aligned_cols=124  Identities=14%  Similarity=0.208  Sum_probs=96.7

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEE-eecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCcc
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGR-SVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~-~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      .|+++.|+|.+.+ |+++|++||+++||.+.+.. ...++. ..+..++++|+.|++++..|++.|..+.      .+.+
T Consensus         2 ~m~~i~Pyl~f~g-~a~eAi~FY~~vFg~~~v~~~~~~~~~-~~~~~g~i~ha~l~i~g~~~~~~d~~~~------~~~~   73 (129)
T d1tsja_           2 DIPKITTFLMFNN-QAEEAVKLYTSLFEDSEIITMAKYGEN-GPGDPGTVQHSIFTLNGQVFMAIDANSG------TELP   73 (129)
T ss_dssp             CCCSEEEEEECSS-CHHHHHHHHHHHSSSCEEEEEEECC------CTTSEEEEEEEETTEEEEEEC-------------C
T ss_pred             CCCcEEEEEEECC-CHHHHHHHHHHHcCCcEEEEEEecCCC-CCCCCCcEEEEEEEECCEEEEeecCCCC------CCCC
Confidence            5889999999975 99999999999997754433 322221 1123468999999999999999887653      2345


Q ss_pred             EEEEEEeCCHHHH--HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          101 CVLCLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       101 ~~i~~~V~dv~~~--~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      .++++.+++.+++  +.+++++|+++++++++.+|   |.++++|+||+|+.|+|..+
T Consensus        74 ~s~~v~~~~~~e~~~~~~~L~~gg~v~~p~~~~~~---g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          74 ISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPP---YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHTTCEEEEEEEEETT---EEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeccCCHHHHHHHHHHhccCCEEecccccccc---cceEEEEECCCCCEEEEeCC
Confidence            6789999998887  77888999999999999999   99999999999999999865

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.88  E-value=6.4e-22  Score=135.58  Aligned_cols=110  Identities=14%  Similarity=0.138  Sum_probs=91.9

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      +..|.|+  |+++|++||+++||+++....       ++      ++.+..++..|++......  +....+.+++++|.
T Consensus         5 ~i~i~V~--di~~a~~FYe~~lg~~~~~~~-------~~------~~~~~~g~~~l~l~~~~~~--~~~~~~~~~~~~f~   67 (115)
T d2i7ra1           5 QLDIIVS--NVPQVCADLEHILDKKADYAN-------DG------FAQFTIGSHCLMLSQNHLV--PLENFQSGIIIHIE   67 (115)
T ss_dssp             EEEEECS--CHHHHHHHHHHHHTSCCSEEE-------TT------EEEEEETTEEEEEESSCSS--SCCCCCSCEEEEEE
T ss_pred             EEEEEEC--CHHHHHHHHHHhhCCceeeec-------CC------eEEEEEcCceeeeeecccC--CCCCCCcceEEEEE
Confidence            4455555  999999999999999876542       22      7888999998888665421  12445677899999


Q ss_pred             eCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          107 TEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       107 V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      |+|+++++++++++|+.+..+|...+|   |.+.++|+||+||+|+|.+.
T Consensus        68 v~D~d~~~~~l~~~G~~i~~~~~~~~~---g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          68 VEDVDQNYKRLNELGIKVLHGPTVTDW---GTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CSCHHHHHHHHHHHTCCEEEEEEECTT---SCEEEEEECGGGCEEEEEEC
T ss_pred             ECCHHHHHHHHHhhccccccceEEeeC---CeEEEEEECCCCCEEEEEEe
Confidence            999999999999999999999999999   99999999999999999875

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.83  E-value=1e-20  Score=127.31  Aligned_cols=109  Identities=14%  Similarity=0.064  Sum_probs=84.4

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCcc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~  100 (165)
                      ++++.+.|.++  |+++|++||+++||+++....        +.     +..+..++.  .+......     ......+
T Consensus         1 v~ri~~~l~v~--d~~~a~~FY~~~lG~~~~~~~--------~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~   60 (111)
T d2pjsa1           1 VRRVVANIATP--EPARAQAFYGDILGMPVAMDH--------GW-----IVTHASPLEAHAQVSFARE-----GGSGTDV   60 (111)
T ss_dssp             EEEEEEEEECS--CGGGGHHHHTTTTCCCEEEEC--------SS-----EEEEEEEEEEEEEEEEESS-----SBTTBCC
T ss_pred             CeEEEEEEEeC--CHHHHHHHHHHhhCCceeecc--------cc-----eeEeccccccceeeecccc-----cCCCCce
Confidence            36788889998  999999999999999987652        11     333333332  22222221     1233456


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEE
Q 031118          101 CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLIC  154 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~  154 (165)
                      .+++|.|+|+++++++++++|++++.+|...+|   |.+.++++||+||+|+|+
T Consensus        61 ~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~---g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          61 PDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW---GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCCSEEEEECTT---SCEEEEEECTTSCEEEEE
T ss_pred             eEEEEEecCHHHHHHHHHhhccccccCCeEcCC---CcEEEEEECCCCCEEEeC
Confidence            689999999999999999999999999999999   999999999999999985

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.78  E-value=7.5e-18  Score=115.15  Aligned_cols=110  Identities=15%  Similarity=0.143  Sum_probs=86.5

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      ++.|.|.++  |+++|++||++ |||++....       .+      ++.+..++..+.+......    ....++.+++
T Consensus         3 ~~~p~l~v~--Dl~~s~~FY~~-LGf~~~~~~-------~~------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   62 (120)
T d1ecsa_           3 QATPNLPSR--DFDSTAAFYER-LGFGIVFRD-------AG------WMILQRGDLMLEFFAHPGL----DPLASWFSCC   62 (120)
T ss_dssp             EEEEEEEES--CHHHHHHHHHT-TTCEEEEEC-------SS------EEEEEETTEEEEEEECTTC----CGGGCCCEEE
T ss_pred             eEEEEEEeC--CHHHHHHHHHH-cCCeeEEec-------Cc------eeeeecceecccccccccc----ccCCCCcEEE
Confidence            477889998  99999999987 999987652       11      6666777776665443321    2234567899


Q ss_pred             EEeCCHHHHHHHHHHCCCeE-------EecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVEAAVAKAVSAGAVA-------EGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~~~~~~~~~G~~i-------~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +.|+|+++.++++.+.|.++       +.+|...+|   |.|.++|+|||||+|+|.+..
T Consensus        63 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          63 LRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGW---GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             EEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTT---SSEEEEEECTTSCEEEEEECC
T ss_pred             EEECCHHHHHHHHhhhhhhhccccccccccceecCC---CcEEEEEECCCCCEEEEEEcc
Confidence            99999999999998877665       567888999   999999999999999999863

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.75  E-value=1.6e-17  Score=114.76  Aligned_cols=117  Identities=9%  Similarity=-0.008  Sum_probs=79.9

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEEEE-
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVLCL-  105 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i~~-  105 (165)
                      +.++.+.+.|++++++||+++||+++....+...    .  .......+..++..+.+....+.     ......|++| 
T Consensus         5 i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~f~   73 (130)
T d1r9ca_           5 LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQ----F--SLSREKFFLIGDIWVAIMQGEKL-----AERSYNHIAFK   73 (130)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGST----T--CCSCEEEEEETTEEEEEEECCCC-----SSCCSCEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCcc----c--cceeEEEEecCCEEEeecccccc-----cccceeeeeec
Confidence            4455555569999999999999999987653221    0  01224455667776766554332     1223335555 


Q ss_pred             -EeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          106 -ETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       106 -~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                       .++|++++++++.++|+++..++....+   +.+.+||+|||||+|||.+..
T Consensus        74 v~~~dv~~~~~~l~~~gv~i~~~~~~~~~---~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          74 IDDADFDRYAERVGKLGLDMRPPRPRVEG---EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC--------CCEEEEECTTSCEEEEECCC
T ss_pred             ccHHHHHHHHHHHHHCCCeEecCCcccCC---CEEEEEEECCCCCEEEEEECC
Confidence             4458999999999999999887777666   779999999999999998754

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.74  E-value=1.1e-17  Score=115.46  Aligned_cols=113  Identities=22%  Similarity=0.261  Sum_probs=81.5

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC-eEEEEecC------CCCCcccccCCc
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG-STFLVSDV------SGDSAAAQTVGT   99 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~-~~l~l~d~------~~~~~~~~~~~~   99 (165)
                      +..|.|+  |+++|++||++ ||+.+.....      ..     .+..+..++ ..+++...      .+. .+....++
T Consensus         5 hv~l~V~--D~~~s~~FY~~-Lg~~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   69 (128)
T d1klla_           5 LFAVVVE--DMAKSMEFYRK-MGVEIPAEAD------SA-----PHTEAVLDGGIRLAWDTVETVRSYDPE-WQAPTGGH   69 (128)
T ss_dssp             EEEEEES--CHHHHHHHHHH-TTCCCCTTGG------GC-----SEEEEECGGGCEEEEEEHHHHHHHCTT-CCCCCSSC
T ss_pred             EEEEEcC--CHHHHHHHHHH-hCCccccccc------cc-----cceeeeccceeeeeecccccccccCCC-CCCCcccc
Confidence            3455566  99999999976 8887643321      11     145555544 45554321      111 11234556


Q ss_pred             cEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          100 GCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       100 ~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ..++++.|+|   +++++++++++|++++.+|...+|   |.+.+||+|||||+|+|+++.
T Consensus        70 ~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~---G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          70 RFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW---GQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTT---SEEEEEEECTTSCEEEEEEEC
T ss_pred             ceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCC---CcEEEEEECCCCCEEEEEecC
Confidence            6799999987   566799999999999999999999   999999999999999999874

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.73  E-value=3.8e-17  Score=111.41  Aligned_cols=110  Identities=18%  Similarity=0.156  Sum_probs=83.9

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      +...+|.|.++  |+++|++||+++||+++....  +     .      ++.+..++..+.+.....     .....+.+
T Consensus         4 ~~~~~pvL~v~--Dl~~s~~FY~~vLG~~~~~~~--~-----~------~~~~~~~~~~l~l~~~~~-----~~~~~~~~   63 (122)
T d1jifa_           4 FLGAVPVLTAV--DVPANVSFWVDTLGFEKDFGD--R-----D------FAGVRRGDIRLHISRTEH-----QIVADNTS   63 (122)
T ss_dssp             EEEEEEEEEES--SHHHHHHHHHHTTCCEEEEEC--S-----S------EEEEEETTEEEEEEECSC-----HHHHTTCE
T ss_pred             ceeeEEEEEcC--CHHHHHHHHHhhhCCceEecC--C-----c------eeEeeeeeeeeeeecccc-----ccccceeE
Confidence            44577778888  999999999999999987652  1     1      677788888887755432     22334567


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEec-------CcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGE-------LAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~-------p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      +++.+.|++++++++.+.+......       +...++   |.+.+||+|||||+|+|.+
T Consensus        64 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~DPdGn~ief~~  120 (122)
T d1jifa_          64 AWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESP---AGREFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             EEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEET---TEEEEEEECTTCCEEEEEE
T ss_pred             EEEeechhHHHHHHHHhhcceEEeeccccccCccccCC---CeEEEEEECCCCCEEEEEe
Confidence            9999999999999999888665432       223345   6699999999999999986

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=2.3e-16  Score=113.56  Aligned_cols=116  Identities=16%  Similarity=0.197  Sum_probs=87.7

Q ss_pred             eeEEEEEEecCCHHHHHHHHHHhhCCEEE-EEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEEE
Q 031118           25 GMKPQLLVEAPKATDAVQFYKTAFGAVEI-GRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        25 ~~~~~l~v~~~D~~~a~~FY~~vlG~~~~-~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      +++++|.+.+ |+++|++||+++||...+ .....++...++..++|+|+.|.++|..|+++|..+.    ...+++++|
T Consensus         2 ~~t~~L~F~G-na~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~~----~~~~~~~sl   76 (156)
T d1u69a_           2 KNTICLWYDS-AALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA----FRHSEAFSF   76 (156)
T ss_dssp             CEEEEEEESS-CHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT----CCCCTTEEE
T ss_pred             CCcEeeeECC-cHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCCC----CCCCCCeEE
Confidence            5889999996 999999999999976443 3333333222344568999999999999999887654    456788999


Q ss_pred             EEEeCCHHHH--HHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          104 CLETEDVEAA--VAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~dv~~~--~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +|.++|.+++  +.+.++.||.+.++     +   |    ||+|+||+.|+|+.+.
T Consensus        77 ~l~~d~~eE~d~~f~~LsegG~~~~~-----~---G----~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          77 QVATDDQAETDRLWNAIVDNGGEESA-----C---G----WCRDKWGISWQITPRV  120 (156)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEECS-----T---T----EEECTTSCEEEEEEHH
T ss_pred             EEecCCHHHHHHHHHHHhccCCCCCC-----C---e----EEECCCCCEEEeChHH
Confidence            9999997776  44456666655432     3   4    7999999999999764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.72  E-value=1.6e-16  Score=107.55  Aligned_cols=110  Identities=21%  Similarity=0.222  Sum_probs=85.0

Q ss_pred             CcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccE
Q 031118           22 SFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        22 ~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      .|++.+|.|.|+  |+++|++||+++|||++..+.  +     .      +..+..++..+.+.....     ....+..
T Consensus         2 ~~t~~~pvL~v~--D~~~s~~FY~~~LG~~~~~~~--~-----~------~~~~~~~~~~l~~~~~~~-----~~~~~~~   61 (120)
T d1xrka_           2 KLTSAVPVLTAR--DVAEAVEFWTDRLGFSRVFVE--D-----D------FAGVVRDDVTLFISAVQD-----QVVPDNT   61 (120)
T ss_dssp             EEEEEEEEEEES--CHHHHHHHHHHTTCCEEEEEC--S-----S------EEEEEETTEEEEEEECSC-----TTTGGGC
T ss_pred             cceeEEEEEEEC--CHHHHHHHHHHhhCCeEEEEC--C-----C------eeEEecccceeecccccc-----ccCCCCc
Confidence            488999999999  999999999999999987653  1     1      566677887777655432     2234556


Q ss_pred             EEEEEeCCHHHHHHHHHH--------CCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          102 VLCLETEDVEAAVAKAVS--------AGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~--------~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      ++.+.+++++..+.++.+        .|+.+..++.+.+|   | +.+||+|||||+|+|+.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          62 QAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW---G-REFALRDPAGNCVHFVA  119 (120)
T ss_dssp             EEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETT---E-EEEEEECTTCCEEEEEE
T ss_pred             eEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCC---E-EEEEEECCCCCEEEEEE
Confidence            788999999888766653        44556677878877   7 79999999999999985

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.4e-16  Score=109.27  Aligned_cols=128  Identities=16%  Similarity=0.147  Sum_probs=83.6

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEE--EecCCCCCcccccCC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFL--VSDVSGDSAAAQTVG   98 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~--l~d~~~~~~~~~~~~   98 (165)
                      |+-.++.|.|+  |+++|++||+++||+++......+.    +   ......+.....  ...  ....... .......
T Consensus         1 Mkl~Hv~i~V~--Dl~~s~~FY~~iLG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   70 (135)
T d1f9za_           1 MRLLHTMLRVG--DLQRSIDFYTKVLGMKLLRTSENPE----Y---KYSLAFVGYGPETEEAVIELTYNWGV-DKYELGT   70 (135)
T ss_dssp             CCEEEEEEECS--CHHHHHHHHHHTTCCEEEEEEEETT----T---TEEEEEEESSCTTTSCEEEEEEETTC-CCCCCCS
T ss_pred             CcceEEEEEcC--CHHHHHHHHHHHhCCEEEeeccccc----c---ceeeeeeccceeeecccccccccccc-ccccccc
Confidence            66666677777  9999999999999999877654331    1   122333222111  111  1111110 0012334


Q ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecccCC
Q 031118           99 TGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKKCAG  162 (165)
Q Consensus        99 ~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~~~~  162 (165)
                      ...++++.++++++++++++++|..+..+|...++  .+.+++||+|||||+|||++......+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~q~~~~~~~  132 (135)
T d1f9za_          71 AYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKG--GTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTT--SCCEEEEEECTTSCEEEEEEC------
T ss_pred             cceeeccchHHHHHHHHHHHHcCCCeecCCccccC--CCeEEEEEECCCCCEEEEEECCCcccc
Confidence            45689999999999999999999999988877665  146888999999999999997755443

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.70  E-value=3.8e-16  Score=109.54  Aligned_cols=125  Identities=15%  Similarity=0.196  Sum_probs=83.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcc---cccC-CCCceEEEEEEECC--eEEEEecC---C-CCCcc-cccC
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKR---KAEQ-ELPLISCAQLEIAG--STFLVSDV---S-GDSAA-AQTV   97 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~---~~~g-~~~~v~~~~l~~g~--~~l~l~d~---~-~~~~~-~~~~   97 (165)
                      |+.+.+.|+++|++||++ ||+++..+......   ...+ .......+.+...+  ..+.+...   . ....+ ....
T Consensus        12 Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   90 (149)
T d1ss4a_          12 NVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPVN   90 (149)
T ss_dssp             EEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCCSS
T ss_pred             EEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccCCC
Confidence            455555599999999998 99998876532110   0000 11123344454432  34443221   1 11111 1222


Q ss_pred             Ccc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           98 GTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        98 ~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ..+ .|++|.|+|+++++++++++|+++..+|....+   +.+.+|++||+|+.|+|++..
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN---SYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT---TEEEEEEECGGGCEEEEEEEC
T ss_pred             CcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC---CeEEEEEECCCCCEEEEEEcc
Confidence            233 489999999999999999999999999988777   889999999999999999875

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.68  E-value=3.1e-16  Score=109.58  Aligned_cols=122  Identities=11%  Similarity=0.171  Sum_probs=80.3

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCcc
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~  100 (165)
                      +..+...|.+.+.|+++|++||+++||+++..+...+.    +    ...+.+...+.  .+.+...... .+....+..
T Consensus         6 ~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~----~----~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~   76 (137)
T d1twua_           6 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN----G----YDGVMFGLPHADYHLEFTQYEGG-STAPVPHPD   76 (137)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET----T----EEEEEEESSSSSEEEEEEEETTC-CCCCCCCTT
T ss_pred             CceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc----c----eeEEEecCCCCceeeeccccccc-ccccccccC
Confidence            33344444444449999999999999999977653221    1    22344444443  3333322211 111222334


Q ss_pred             EEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .|++|.|+|   +++++++++++|++++.++. ..|   +.+.+||+||||++|+|+.+.
T Consensus        77 ~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~-~~~---~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          77 SLLVFYVPNAVELAAITSKLKHMGYQEVESEN-PYW---SNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             CEEEEECCCHHHHHHHHHHHHHTTCCEECCSS-HHH---HSSEEEEECTTCCEEEEESSC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCC-CCC---CceEEEEECCCCCEEEEEcCC
Confidence            589998887   66778999999999986654 456   778999999999999999654

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.8e-15  Score=104.96  Aligned_cols=114  Identities=15%  Similarity=0.061  Sum_probs=82.0

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      |.+-+-+|.+.+.|++++++||+++||+++..+.  +     .      +..+..++..+......... .......+++
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~   66 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARW--D-----Q------GAYLELGSLWLCLSREPQYG-GPAADYTHYA   66 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE--T-----T------EEEEEETTEEEEEEECTTCC-CCCSSSCEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEec--c-----c------eeeeecCCeEEEEeeecccc-ccccccccch
Confidence            4445566777777999999999999999987653  1     1      45556677766544332211 0223345566


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      +++.++|++++++++.++|+++..++.   +   +.+.+||+||+||+|||.+.
T Consensus        67 ~~~~~~dl~~~~~~l~~~G~~~~~~~~---~---~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          67 FGIAAADFARFAAQLRAHGVREWKQNR---S---EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             EEECHHHHHHHHHHHHHTTCCEEECCC---S---SSCEEEEECTTCCEEEEESC
T ss_pred             hccccchHHHHHHHHHHCCCcCccCCC---c---ceeEEEEECCCCCEEEEEEC
Confidence            777778999999999999999876543   3   44789999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.67  E-value=2.4e-15  Score=104.98  Aligned_cols=115  Identities=14%  Similarity=0.044  Sum_probs=78.2

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCcccccCCccEE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSAAAQTVGTGCV  102 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~~~~~~~~~~~  102 (165)
                      |..-+-+|.+.+.|++++++||+++||+++.....       .      ...+..++..+.+.................|
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~-------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h   67 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN-------T------GAYLTCGDLWVCLSYDEARQYVPPQESDYTH   67 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET-------T------EEEEEETTEEEEEEECTTCCCCCGGGSCSCE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec-------c------ccccccccccceeecccccccCCCcCCccce
Confidence            44445566666669999999999999999876531       1      3445667665554332221111122233334


Q ss_pred             EEEE--eCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118          103 LCLE--TEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus       103 i~~~--V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      ++|.  ++|+++++++++++|+.+...+.   +   +.+.+||+||+||.|+|.+.
T Consensus        68 ~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~---~---~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          68 YAFTVAEEDFEPLSQRLEQAGVTIWKQNK---S---EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             EEEECCHHHHHHHHHHHHHTTCCEEECCC---S---SSEEEEEECTTCCEEEEEEC
T ss_pred             eeeechHHHHHHHHHHHHHCCCeEeecCC---C---CceEEEEECCCCCEEEEEEC
Confidence            4554  47899999999999999887653   3   55889999999999999775

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.5e-15  Score=105.52  Aligned_cols=128  Identities=16%  Similarity=0.145  Sum_probs=88.1

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc-c----cccC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA-A----AQTV   97 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~-~----~~~~   97 (165)
                      |.++ -||.+.|.|+++|++||+++|||+++.....+.    + ........+..++..+.+........ +    ....
T Consensus         9 ~~~~-dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   82 (149)
T d1sqia1           9 FLHF-HSVTFWVGNAKQAASFYCNKMGFEPLAYKGLET----G-SREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKH   82 (149)
T ss_dssp             EEEE-EEEEEECSCHHHHHHHHHHHHCCEEEEEESGGG----T-CCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             eeeE-eEEEEEcCCHHHHHHHHhhccceEEEEEecccC----C-ceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhC
Confidence            4443 455555559999999999999999987764321    1 11234455566777777654321111 1    1233


Q ss_pred             CccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCc-eEEEEEcCCCCeEEEEeee
Q 031118           98 GTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGE-RVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        98 ~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~-~~~~~~DP~G~~~~l~~~~  157 (165)
                      +.++ ||+|.|+|+++++++++++|++++.+|...... +|. ++++++.|.|..++|+++.
T Consensus        83 g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~-~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          83 GDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDK-FGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECC-CCeEEEEEEECCCCCEEEEEEeC
Confidence            4555 899999999999999999999999998765431 133 6778888777888999876

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-14  Score=102.73  Aligned_cols=122  Identities=16%  Similarity=0.138  Sum_probs=79.7

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-------------------CeE--EEEe
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-------------------GST--FLVS   85 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-------------------~~~--l~l~   85 (165)
                      ..|+.+.|.|+++|++||+++||+++......+.    +   ......+..+                   +..  +...
T Consensus        24 l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (176)
T d1qipa_          24 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPI----M---KFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN   96 (176)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETT----T---TEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccC----C---ceEEEEeecCCccccccccccccccccccccceeEEEe
Confidence            4555555559999999999999999886654332    1   0111111111                   111  1111


Q ss_pred             cCC--CC-Ccc--cccC-CccEEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeecc
Q 031118           86 DVS--GD-SAA--AQTV-GTGCVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVKK  159 (165)
Q Consensus        86 d~~--~~-~~~--~~~~-~~~~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~~  159 (165)
                      ...  +. ...  .... ..-.|+++.++|++++++++.++|+++..+|....    +.+.+||+|||||.|||+++.+-
T Consensus        97 ~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~----~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_          97 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK----MKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             TTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS----STTCEEEECTTCCEEEEECTTTG
T ss_pred             eccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC----ceEEEEEECCCCCEEEEEeCCCC
Confidence            110  00 000  1112 23358999999999999999999999999987654    44678999999999999997653

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.60  E-value=2.2e-14  Score=102.86  Aligned_cols=126  Identities=19%  Similarity=0.176  Sum_probs=89.0

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc-------c-cccCC
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA-------A-AQTVG   98 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~-------~-~~~~~   98 (165)
                      +-|+.+.|.|+++|++||+++|||+++.....+.    + ........+..++..|.+........       + ....+
T Consensus         8 idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~----~-~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g   82 (163)
T d1t47a1           8 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPEN----G-SRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHG   82 (163)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGG----T-CCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHC
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccc----c-ceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCC
Confidence            4566666669999999999999999987754331    1 11233455566777777655332111       0 12233


Q ss_pred             cc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118           99 TG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus        99 ~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .+ .||+|.|+|+++++++++++|++++.+|.......+..+++++++|.|..++|+++.
T Consensus        83 ~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          83 DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            44 599999999999999999999999999876543101247889999999999998865

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.58  E-value=1.5e-14  Score=96.85  Aligned_cols=108  Identities=17%  Similarity=0.107  Sum_probs=72.2

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC-CeEEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA-GSTFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g-~~~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |.--+..|.|+  |++++++||+++||+++..+..       +   .  +..+..+ +..+.+.....     ...+...
T Consensus         2 m~i~Hi~l~v~--Dl~~a~~FY~~~lG~~~~~~~~-------~---~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~   62 (113)
T d1xqaa_           2 MGIKHLNLTVA--DVVAAREFLEKYFGLTCSGTRG-------N---A--FAVMRDNDGFILTLMKGKE-----VQYPKTF   62 (113)
T ss_dssp             CCCCEEEEEES--CHHHHHHHHHHHHCCEEEEEET-------T---T--EEEEECTTCCEEEEEECSS-----CCCCTTC
T ss_pred             CcccEEEEEeC--CHHHHHHHHHHhhCCEEEEeec-------C---c--ceeeeecceeeeeeeeeec-----ccccccc
Confidence            33335556666  9999999999999999876531       1   1  2222222 23454443321     2234456


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118          102 VLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus       102 ~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                      |++|.|+|   +++++++++++|.++..+|..      +.+.+||+||+||+|||.+
T Consensus        63 h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~------~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          63 HVGFPQESEEQVDKINQRLKEDGFLVEPPKHA------HAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC-------CEEEEEEETTTEEEEEEC
T ss_pred             eeeeeeccccchhhhhhhHHHcCCccccCCCC------ceEEEEEECCCCCEEEEEC
Confidence            89999987   556789999999987654432      3377899999999999964

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.57  E-value=1.9e-14  Score=99.80  Aligned_cols=110  Identities=15%  Similarity=0.109  Sum_probs=76.4

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      .-||.+.++|++++++||+++||+++..+.       ++      ...++.++  ..|.+....        .....|+.
T Consensus         5 l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~-------~~------~~~l~~~~~~~~l~l~~~~--------~~~~~h~~   63 (131)
T d1lgta1           5 LGYMGFAVSDVAAWRSFLTQKLGLMEAGTT-------DN------GDLFRIDSRAWRIAVQQGE--------VDDLAFAG   63 (131)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE-------TT------EEEEESSSBSCSEEEEECT--------TCEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCceeecC-------Cc------ceEEeecCCceEEEEecCC--------CCCceEEE
Confidence            346666666999999999999999987652       11      33445544  234443321        23455899


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|.+   ++++++++.++|.++...|.......++.+.+||+||+||+|||....
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            99965   566799999999998877755321011558899999999999998644

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.57  E-value=4.6e-14  Score=97.98  Aligned_cols=125  Identities=16%  Similarity=0.177  Sum_probs=83.5

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEE------EECCeEEEEecCC-CCCc--c
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQL------EIAGSTFLVSDVS-GDSA--A   93 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l------~~g~~~l~l~d~~-~~~~--~   93 (165)
                      |-.-+-|+.+.+.|+++|++||+++||+++......+.   .+    ......      ..++..+.+.... +...  .
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~   76 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPE---QG----VVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAK   76 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT---TT----EEEEEEESSSSCCTTCCEEEEEEESSTTSHHHH
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecc---cc----eEEEeeeceeccccccchhhhhhhhcccCcccc
Confidence            55556666666669999999999999999876654332   11    111111      1234455543322 2111  0


Q ss_pred             ---cccCCc-cEEEEEEeCCHHHHHHHHHHCCCeEEec-CcccccccCCceEEEE--EcCCCCeEEEEeee
Q 031118           94 ---AQTVGT-GCVLCLETEDVEAAVAKAVSAGAVAEGE-LAEGNGACCGERVGKV--KDPYGFTWLICSPV  157 (165)
Q Consensus        94 ---~~~~~~-~~~i~~~V~dv~~~~~~~~~~G~~i~~~-p~~~~~~~~G~~~~~~--~DP~G~~~~l~~~~  157 (165)
                         ...... -.||+|.|+|+++++++++++|++++.+ +...++   |.+.+|+  +||+|++|||++..
T Consensus        77 ~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~---g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          77 WLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTG---GNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             HHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSS---SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCC---CCEEEEEeccCCCCeEEEEEECC
Confidence               112233 4489999999999999999999998765 444455   7677777  89999999999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.56  E-value=1.8e-13  Score=95.50  Aligned_cols=119  Identities=9%  Similarity=0.076  Sum_probs=74.3

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC----CeEEEEecCCCCCcccccCCcc-EE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA----GSTFLVSDVSGDSAAAQTVGTG-CV  102 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g----~~~l~l~d~~~~~~~~~~~~~~-~~  102 (165)
                      -||.+.+.|++++++||+++||+++..+....+   ..   ...+..+...    ...+.+...... .+.....++ -|
T Consensus         8 ~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~H   80 (144)
T d1zswa1           8 HHISMVTKNANENNHFYKNVLGLRRVKMTVNQD---DP---SMYHLFYGDKTGSPGTELSFFEIPLV-GRTYRGTNAITR   80 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCCEEEEEEEETT---EE---EEEEEEEESTTCCTTSEEEEEECTTC-CBCBCCBSEEEE
T ss_pred             eeEEEEeCCHHHHHHHHHHHhCCeeEeeecccc---CC---ceeEEEecccccceeeEEeecccccc-cCCccCCCceeE
Confidence            455555559999999999999999987642221   00   0111111111    123433332211 111222233 48


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118          103 LCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus       103 i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      ++|.|+|   ++++.+++.+.|..+. ++... +   +.+.+||+||+||.|+|+.+..
T Consensus        81 iaf~v~~~~~l~~~~~~l~~~gv~~~-~~~~~-~---~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          81 IGLLVPSEDSLHYWKERFEKFDVKHS-EMTTY-A---NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHHHTTCEEC-CSEEE-T---TEEEEEEECTTCCEEEEEECTT
T ss_pred             EEEecCCchhHHHHhhhhhccceeee-Ccccc-C---CeEEEEEECCCCCEEEEEEeCC
Confidence            9999998   5566889999998764 44443 4   6689999999999999987654

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.56  E-value=4.1e-14  Score=96.73  Aligned_cols=114  Identities=16%  Similarity=0.132  Sum_probs=75.6

Q ss_pred             eEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC---eEEE--EecCCCCCcccccCCcc
Q 031118           26 MKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG---STFL--VSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        26 ~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~---~~l~--l~d~~~~~~~~~~~~~~  100 (165)
                      .++.|.|+  |+++|++||+++||+++......+.    .   ...........   ....  .......  ........
T Consensus         5 ~Hv~l~V~--Dl~~s~~FY~~~LG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   73 (139)
T d2c21a1           5 LHTMIRVG--DLDRSIKFYTERLGMKVLRKWDVPE----D---KYTLVFLGYGPEMSSTVLELTYNYGVT--SYKHDEAY   73 (139)
T ss_dssp             EEEEEECS--CHHHHHHHHHHTTCCEEEEEEEEGG----G---TEEEEEEESSCTTTSCEEEEEEETTCC--CCCCCSSE
T ss_pred             EEEEEEeC--CHHHHHHHHHHHhCCEeeccccccc----c---ceeeeeecccccccccccccccccCcc--cccCCCcc
Confidence            35555555  9999999999999999987754332    1   12222222111   1111  1111110  01233445


Q ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .++++.++++++.++++...+..+..++    +   |.+.+||+|||||+|+|++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          74 GHIAIGVEDVKELVADMRKHDVPIDYED----E---SGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEC----S---SSSEEEEECTTSCEEEEEEHH
T ss_pred             ceeeeehhhHHHHHHHHHHcCCceeeCC----C---CcEEEEEECCCCCEEEEEECC
Confidence            5788999999999999999998887664    4   668999999999999999854

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=2.5e-13  Score=97.52  Aligned_cols=133  Identities=16%  Similarity=0.110  Sum_probs=90.0

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCC-C-----CC--
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVS-G-----DS--   91 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~-~-----~~--   91 (165)
                      +.+|+++ -||.+.|+|+++|++||+++|||+...+...+.    +.. ......+..++..+.+.... .     ..  
T Consensus         7 ~~~i~~~-dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~----~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   80 (167)
T d1sqda1           7 KFKVKRF-HHIEFWCGDATNVARRFSWGLGMRFSAKSDLST----GNM-VHASYLLTSGDLRFLFTAPYSPSLSAGEIKP   80 (167)
T ss_dssp             SSCEEEE-EEEEEECSCHHHHHHHHHHHHTCEEEEEESGGG----TCS-SEEEEEEEETTEEEEEEEECCGGGTTTCCGG
T ss_pred             CCCCceE-eEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccC----CCe-eEEEEEeeCCCeeEEEecccccccccccccc
Confidence            4455543 366666669999999999999999987763321    110 11222234455544432110 0     00  


Q ss_pred             -----cc----------cccCCcc-EEEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEe
Q 031118           92 -----AA----------AQTVGTG-CVLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICS  155 (165)
Q Consensus        92 -----~~----------~~~~~~~-~~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~  155 (165)
                           .+          ....+.+ .||+|.|+|++++++++.++|++++.+|....+   |.+.++++++.+.+.+|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~---~~~~a~I~~~gd~~~~~v~  157 (167)
T d1sqda1          81 TTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE---AVTIAEVKLYGDVVLRYVS  157 (167)
T ss_dssp             GCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT---TEEEEEEEEETTEEEEEEE
T ss_pred             ccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC---CEEEEEEEccCCcEEEEEe
Confidence                 00          0112334 499999999999999999999999999999888   8899999999888888999


Q ss_pred             eecccC
Q 031118          156 PVKKCA  161 (165)
Q Consensus       156 ~~~~~~  161 (165)
                      +..+..
T Consensus       158 r~~~~~  163 (167)
T d1sqda1         158 YKAEDT  163 (167)
T ss_dssp             ECCC--
T ss_pred             cCCCcc
Confidence            876544

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.54  E-value=9.3e-14  Score=99.58  Aligned_cols=117  Identities=8%  Similarity=-0.051  Sum_probs=76.6

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe-EEEEecCCCCCcccccCCccE
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS-TFLVSDVSGDSAAAQTVGTGC  101 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~-~l~l~d~~~~~~~~~~~~~~~  101 (165)
                      |+--++.|.|+  |+++|++||+++||+++..+...+.    +   ......+..+.. ........      ...+...
T Consensus         4 ~rldHv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~   68 (162)
T d1mpya2           4 VRFDHALMYGD--ELPATYDLFTKVLGFYLAEQVLDEN----G---TRVAQFLSLSTKAHDVAFIHH------PEKGRLH   68 (162)
T ss_dssp             CEEEEEEEEES--CHHHHHHHHHHTTCCEEEEEEECTT----C---CEEEEEEESSSBSCSEEEEEC------SSSSEEE
T ss_pred             ccccEEEEECC--CHHHHHHHHHHccCCEEEEEEcccc----c---cceeeeeeccccccccccccc------CCCCccc
Confidence            44344555555  9999999999999999876643221    1   112222222221 11111111      1223455


Q ss_pred             EEEEEeCCHH---HHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETEDVE---AAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~dv~---~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+++.+.+.+   ++++++.+.|..+..+|....+   | .+.+||+|||||.|||.+.-
T Consensus        69 h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~---g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          69 HVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGL---THGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSS---TTCEEEEEECTTSCEEEEEECC
T ss_pred             eeEEEEeeehhhhhHHHHHHHcCCccccCccccCC---CCeEEEEEECCCCCEEEEEECC
Confidence            8999998766   5678999999999888887665   4 48899999999999998753

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.52  E-value=9.3e-14  Score=97.83  Aligned_cols=106  Identities=15%  Similarity=0.216  Sum_probs=72.5

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe----EEEEecCCCCCcccccCCccEEE
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS----TFLVSDVSGDSAAAQTVGTGCVL  103 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~----~l~l~d~~~~~~~~~~~~~~~~i  103 (165)
                      -+|.+.+.|++++++||+++||++.....  +     +      ...+...+.    .+.+..        .......|+
T Consensus        18 ~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~--------~~~~~~~h~   76 (146)
T d1f1ua1          18 AYMEIVVTDLAKSREFYVDVLGLHVTEED--E-----N------TIYLRSLEEFIHHNLVLRQ--------GPIAAVAAF   76 (146)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEC--S-----S------EEEEECTTCCSSCSEEEEE--------CSSCEEEEE
T ss_pred             eEEEEEeCCHHHHHHHHHhccCcEEEeec--C-----C------ceeeecccccccceeeccc--------cCCCCCcee
Confidence            34444444999999999999999987652  1     1      222221111    111111        112234478


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          104 CLETE---DVEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       104 ~~~V~---dv~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      ++.+.   |+++++++++++|+.+...+....+   | .+.+||+||+||.|+|+...
T Consensus        77 ~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          77 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTK---GIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSST---TBCSEEEEECTTSCEEEEECCB
T ss_pred             eEeeccchhHHHHHHHHHHcCCceeeccccccC---CceEEEEEECCCCcEEEEEEec
Confidence            88886   5777799999999999888877766   5 47889999999999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.51  E-value=2.6e-13  Score=98.26  Aligned_cols=123  Identities=20%  Similarity=0.126  Sum_probs=86.3

Q ss_pred             EEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCC--C---------Ccc---
Q 031118           28 PQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--D---------SAA---   93 (165)
Q Consensus        28 ~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~--~---------~~~---   93 (165)
                      -||.+.|.|++++++||+++|||+...+...+.    +. .......+..++..+.+.....  .         ..+   
T Consensus        15 ~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          15 HHVELWCADAASAAGRFSFGLGAPLAARSDLST----GN-SAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCCEEEEESGGG----TC-CSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHHhhCceEEEEecccc----cc-eeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchh
Confidence            344455559999999999999999987764331    11 1122223444555544422110  0         000   


Q ss_pred             ---cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           94 ---AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        94 ---~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                         ....+.++ ||+|.|+|+++++++++++|++++.+|....+   |.++++++.+.+.+.+|++...
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~---g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR---GFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET---TEEEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC---CEEEEEEECCCCcEEEEEecCC
Confidence               11234555 99999999999999999999999999999888   8899999998888889998773

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.50  E-value=2.5e-14  Score=100.20  Aligned_cols=110  Identities=13%  Similarity=0.141  Sum_probs=69.8

Q ss_pred             ceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC---eEEEEecCCCCCcccccCCcc
Q 031118           24 TGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG---STFLVSDVSGDSAAAQTVGTG  100 (165)
Q Consensus        24 ~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~---~~l~l~d~~~~~~~~~~~~~~  100 (165)
                      +--++.|.|+  |++++++||+++||+++..+.  .    ..    ..+. ...+.   ..+.+...        .....
T Consensus         7 rl~Hv~l~v~--D~~~s~~FY~~vLG~~~~~~~--~----~~----~~~~-~~~~~~~~~~~~~~~~--------~~~~~   65 (145)
T d1mpya1           7 RPGHVQLRVL--DMSKALEHYVELLGLIEMDRD--D----QG----RVYL-KAWTEVDKFSLVLREA--------DEPGM   65 (145)
T ss_dssp             EEEEEEEEES--CHHHHHHHHHHTTCCEEEEEC--T----TS----CEEE-ECTTCCBSCSEEEEEC--------SSCEE
T ss_pred             EeeeEEEEeC--CHHHHHHHHHHhhCCEEEEee--c----cC----ccce-ecccccceeecccccc--------Ccccc
Confidence            3344556666  999999999999999987552  1    11    1111 11111   01111111        11122


Q ss_pred             EEEEE---EeCCHHHHHHHHHHCCCeEEecCcccccccCC-ceEEEEEcCCCCeEEEEeee
Q 031118          101 CVLCL---ETEDVEAAVAKAVSAGAVAEGELAEGNGACCG-ERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       101 ~~i~~---~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G-~~~~~~~DP~G~~~~l~~~~  157 (165)
                      .++.+   .++|++++++++.++|+++...|....+   | .+.+||+||+||+|+|++..
T Consensus        66 ~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~---g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          66 DFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELN---SCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSST---TBCCEEEEECTTSCEEEEESCB
T ss_pred             eeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccC---CceEEEEEECCCCCEEEEEEec
Confidence            34444   4557888899999999998877766544   4 38999999999999998754

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.48  E-value=6.5e-13  Score=96.03  Aligned_cols=114  Identities=14%  Similarity=0.188  Sum_probs=72.1

Q ss_pred             cceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEE-CC---eEEEEecCCCCCcccccCC
Q 031118           23 FTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEI-AG---STFLVSDVSGDSAAAQTVG   98 (165)
Q Consensus        23 m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~-g~---~~l~l~d~~~~~~~~~~~~   98 (165)
                      ++.+ -+|.+.|.|++++.+||+++||+++..+.  +     +      +..+.. ++   ..+.+........ ....+
T Consensus        10 I~Gl-~HV~L~V~Dle~s~~FY~~vLG~~~~~~~--~-----~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   74 (170)
T d1zswa2          10 IQGM-GSVELTVRRLDKMASTLTEIFGYTEVSRN--D-----Q------EAIFQSIKGEAFGEIVVKYLDGPTE-KPGRG   74 (170)
T ss_dssp             CCEE-EEEEEEESCHHHHHHHHHHTTCCEEEEEC--S-----S------EEEEESSTTCSTTCEEEEECCSSBC-BCCBT
T ss_pred             hCCe-eeEEEEeCCHHHHHHHHHHHhCCEEEeec--C-----c------eEEEEeccCccceEEEecccccccc-ccCcc
Confidence            4543 44555555999999999999999987653  1     1      222222 11   1222222111000 11222


Q ss_pred             ccEEEEEEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEee
Q 031118           99 TGCVLCLETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSP  156 (165)
Q Consensus        99 ~~~~i~~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~  156 (165)
                      .-.||+|.|+|   ++++++++.+.|..+. ++.+..+    .+.+||+|||||.|||++.
T Consensus        75 ~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~-~~~~~~~----~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          75 SIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFY----FKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSS----EEEEEEECTTCCEEEEEEE
T ss_pred             ccceEEEEeCChHHHHHHHHHHHhcCCCcc-ccccCCC----EEEEEEECCCCcEEEEEEC
Confidence            23489999987   5566899999999864 5555544    3788999999999999975

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.48  E-value=2.5e-13  Score=94.27  Aligned_cols=110  Identities=15%  Similarity=0.073  Sum_probs=75.4

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +-||.+.++|++++.+||+++||+++....       .+      ...++.++.  .+.+....        .....|+.
T Consensus         5 L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~-------~~------~~~l~~~~~~~~l~~~~~~--------~~~~~h~~   63 (132)
T d1kw3b1           5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSA-------GD------AALYRADQRAWRIAVQPGE--------LDDLAYAG   63 (132)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE-------TT------EEEEESSSBSCSEEEEECT--------TCEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHHhCCceeccc-------cc------eeeeeeeecceeeeeeccC--------CCCceEEE
Confidence            345666666999999999999999986552       11      344555542  23333221        22445899


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETED---VEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~d---v~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |.|.+   ++++++++.++|+++...+......-.+.+.+||+||+||+|||+...
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          64 LEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            99965   666789999999999877664322000447889999999999998643

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.34  E-value=8e-12  Score=88.99  Aligned_cols=114  Identities=13%  Similarity=0.101  Sum_probs=67.5

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEEEE
Q 031118           29 QLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLCLE  106 (165)
Q Consensus        29 ~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~~~  106 (165)
                      ++.+.+.|++++.+||+++|||++......+..  .+  .......+..+..  .+.+...       ...+.-.|++|.
T Consensus        13 Hv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~h~~a~~~~-------~~~~gl~Hiaf~   81 (156)
T d1kw3b2          13 HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMG--PE--TSVPAHFLHCNGRHHTIALAAF-------PIPKRIHHFMLQ   81 (156)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEE--TT--EEEEEEEEESSSBSCSEEEECC-------SCSSSEEEEEEE
T ss_pred             eEEEecCCHHHHHHHHHHhcCceeeeEEeeccC--CC--CcceeEEEeeccccceeeeccC-------CCCCceeEEEEE
Confidence            444444599999999999999998654322110  01  0011122222221  1111111       112234599999


Q ss_pred             eCCHHH---HHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCC-eEEEEee
Q 031118          107 TEDVEA---AVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGF-TWLICSP  156 (165)
Q Consensus       107 V~dv~~---~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~-~~~l~~~  156 (165)
                      |+|+++   ++++++++|..+. .|.+...  +....+|++||+|+ .+++...
T Consensus        82 v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~--~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          82 ANTIDDVGYAFDRLDAAGRITS-LLGRHTN--DQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             BSSHHHHHHHHHHHHHTTCBCB-CSEEESS--SCCEEEEEECSSTTCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHhcCCcee-cCcccCC--CCeEEEEEECCCCCeEEEEecC
Confidence            987666   5889999997654 4555432  03478999999998 5898764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.25  E-value=1e-10  Score=84.71  Aligned_cols=113  Identities=9%  Similarity=-0.010  Sum_probs=70.2

Q ss_pred             EEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCe--EEEEecCCCCCcccccCCccEEEE
Q 031118           27 KPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGS--TFLVSDVSGDSAAAQTVGTGCVLC  104 (165)
Q Consensus        27 ~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~--~l~l~d~~~~~~~~~~~~~~~~i~  104 (165)
                      +-||.+.+.|++++++|| ++|||++..+...+.    +   ....+.+..++.  .+.+..        ...+...|++
T Consensus         6 l~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~----~---~~~~~~~~~~~~~~~l~~~~--------~~~~~~~H~~   69 (176)
T d1f1ua2           6 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSD----G---VTYAAWMHRKQTVHDTALTG--------GNGPRMHHVA   69 (176)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTT----C---CEEEEEEESSSSSCSEEEEE--------SSBSEEEEEE
T ss_pred             eeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCC----c---ceeeeeeccCccccceeccc--------ccCCCcccee
Confidence            345555555999999999 689999876543221    1   122222232221  222211        1223445899


Q ss_pred             EEeCCHHHH---HHHHHHCCCe--EEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          105 LETEDVEAA---VAKAVSAGAV--AEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       105 ~~V~dv~~~---~~~~~~~G~~--i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      +.+.+++..   ++++.++|..  +...|.....  ++..++||+||+||+|||....
T Consensus        70 f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~--g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          70 FATHEKHNIIQICDKMGALRISDRIERGPGRHGV--SNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCGGGEEEEEEECST--TCCEEEEEECTTCCEEEEEECC
T ss_pred             EEeccchhHHHHHHHHHHcCCceeeeecccccCC--CCceEEEEECCCCCEEEEEeCC
Confidence            999876655   6788888874  4445555443  0347889999999999998754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.12  E-value=3.3e-10  Score=80.19  Aligned_cols=122  Identities=11%  Similarity=0.118  Sum_probs=86.4

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECCeEEEEecCCCCCc--ccccC
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSGDSA--AAQTV   97 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~~~l~l~d~~~~~~--~~~~~   97 (165)
                      |.||..+ -||.+.++|++++.+||++ |||+...+...      .   .  ...++.|+..|.+........  ....+
T Consensus         4 p~g~~Gi-dhv~fav~d~~~~~~~~~~-lGF~~~~~~~~------~---~--~~l~~~G~i~ll~~~~~~s~~~~~~~~h   70 (150)
T d1cjxa1           4 PMGLMGF-EFIEFASPTPGTLEPIFEI-MGFTKVATHRS------K---N--VHLYRQGEINLILNNEPNSIASYFAAEH   70 (150)
T ss_dssp             TTCEEEE-EEEEEECSSTTSSHHHHHH-TTCEEEEEESS------S---S--EEEEEETTEEEEEECCSSSHHHHHHHHH
T ss_pred             CCccCCE-EEEEEecCCHHHHHHHHHH-hCCEEEecccc------e---E--EEEEecCcEEEEecCCCCCHhHhHHhhC
Confidence            5666653 5666777799999999986 99998765311      1   1  223455777776644321100  12345


Q ss_pred             CccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeeec
Q 031118           98 GTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPVK  158 (165)
Q Consensus        98 ~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~~  158 (165)
                      +.++ ||+|.|+|+++++++++++|++++.+|.. ++   ...+..+++|+|.++.|+.+..
T Consensus        71 g~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~-~g---~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          71 GPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG-PM---ELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC-TT---CBCCCEEECGGGCEEEEECCCS
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCC-CC---ceeeeEEEcCCCCEEEEECcCC
Confidence            6665 89999999999999999999998877644 23   4467789999999999998754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.56  E-value=3.9e-07  Score=67.05  Aligned_cols=99  Identities=12%  Similarity=0.057  Sum_probs=62.9

Q ss_pred             eEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEec-CCCCCc-----ccc
Q 031118           26 MKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSD-VSGDSA-----AAQ   95 (165)
Q Consensus        26 ~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d-~~~~~~-----~~~   95 (165)
                      -+.||.+.++  |+++++.||+++|||+.....+.+.    .. ..+....+....  ..+.+.. ......     ...
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~----~~-~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~   79 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKG----EY-TGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ   79 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEEC----SS-CEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCC----Cc-ceEEEEEeeccccccceecccCCCCCccHHHHHHHh
Confidence            4567777775  9999999999999999877654332    11 012222222222  2332222 211111     122


Q ss_pred             cCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCc
Q 031118           96 TVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELA  129 (165)
Q Consensus        96 ~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~  129 (165)
                      ..+.++ ||+|.|+|+.+++++++++|++++..|.
T Consensus        80 ~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~pp  114 (203)
T d1cjxa2          80 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  114 (203)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             cCCCCCceEEEEeCCHHHHHHHHHhcCCccccCch
Confidence            345555 9999999999999999999999987653

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.9e-07  Score=68.15  Aligned_cols=105  Identities=10%  Similarity=0.100  Sum_probs=64.9

Q ss_pred             ceeEEEEEEecCC--HHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCCCCCc---c---
Q 031118           24 TGMKPQLLVEAPK--ATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVSGDSA---A---   93 (165)
Q Consensus        24 ~~~~~~l~v~~~D--~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~~~~~---~---   93 (165)
                      -..+.||.+.+++  +++++.||+++|||......+..+. .+... .+....+...  ...+.+....+...   .   
T Consensus        22 l~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i-~~~~~-~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~f   99 (210)
T d1sqia2          22 LEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQV-HTEYS-SLRSIVVANYEESIKMPINEPAPGRKKSQIQEY   99 (210)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-------------CEEEEEECTTSCCEEEEEECC-----CHHHHH
T ss_pred             cceeCceEeccCchhHHHHHHHHHHHhCCEEEEEeccccc-CCcee-EEEEEEEEecCccccccccccCCCCcccHHHHH
Confidence            3478899988876  9999999999999987654321110 01100 1111222332  23555544332211   0   


Q ss_pred             -cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcc
Q 031118           94 -AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAE  130 (165)
Q Consensus        94 -~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~  130 (165)
                       ....+.++ ||+|.|+|+.++.++++++|++++..|..
T Consensus       100 l~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~~  138 (210)
T d1sqia2         100 VDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSS  138 (210)
T ss_dssp             HHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCHH
T ss_pred             HhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCcc
Confidence             12345565 99999999999999999999999988753

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.44  E-value=1.4e-06  Score=64.93  Aligned_cols=107  Identities=11%  Similarity=0.131  Sum_probs=62.1

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEEC--CeEEEEecCC-CCC--cc-
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIA--GSTFLVSDVS-GDS--AA-   93 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g--~~~l~l~d~~-~~~--~~-   93 (165)
                      ..||+ -+-||.+.|+|+++++.||+++|||+........+.. ... ..+....+...  ...+.+.... +..  .+ 
T Consensus         4 d~Gl~-~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~-~~~-~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i   80 (224)
T d1sp8a2           4 DYGLS-RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVG-TAE-SGLNSMVLANNSENVLLPLNEPVHGTKRRSQI   80 (224)
T ss_dssp             CCSEE-EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC----------CEEEEEEECSSSCCEEEEEEECCCSSSCCHH
T ss_pred             CCCcC-eeeeeEEeccCHHHHHHHHHHHhCCEEEEEecccccc-ccc-eeEEEEEEEcCCCccceeeeeecCCCCCccHH
Confidence            45565 5677888888999999999999999987665322100 010 01111222222  2344443321 111  10 


Q ss_pred             ----cccCCccE-EEEEEeCCHHHHHHHHHHCC----CeEEecCc
Q 031118           94 ----AQTVGTGC-VLCLETEDVEAAVAKAVSAG----AVAEGELA  129 (165)
Q Consensus        94 ----~~~~~~~~-~i~~~V~dv~~~~~~~~~~G----~~i~~~p~  129 (165)
                          ....+.++ ||+|.|+|+++++++++++|    .+.+..|.
T Consensus        81 ~~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p~  125 (224)
T d1sp8a2          81 QTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPT  125 (224)
T ss_dssp             HHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCC
T ss_pred             HHHHHhccCCCceeEEEEeCCHHHHHHHHHhccccccceecccch
Confidence                11234555 99999999999999998765    45565553

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.35  E-value=1.7e-06  Score=63.32  Aligned_cols=104  Identities=14%  Similarity=0.157  Sum_probs=66.0

Q ss_pred             eeEEEEEEecC--CHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEEEEECC--eEEEEecCCCCC--cc-----
Q 031118           25 GMKPQLLVEAP--KATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAG--STFLVSDVSGDS--AA-----   93 (165)
Q Consensus        25 ~~~~~l~v~~~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~l~~g~--~~l~l~d~~~~~--~~-----   93 (165)
                      .-+.||.+.++  ++++++.||+++|||+.......++.  ......+....+...+  ..+-+....+..  ..     
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di--~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDI--ATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHH--HTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEeccccc--ccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            45778888886  99999999999999987654322210  0001122222233222  345444322211  10     


Q ss_pred             cccCCccE-EEEEEeCCHHHHHHHHHHCCCeEEecCcc
Q 031118           94 AQTVGTGC-VLCLETEDVEAAVAKAVSAGAVAEGELAE  130 (165)
Q Consensus        94 ~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~~i~~~p~~  130 (165)
                      ....+.++ ||+|.|+|+.++.++++++|...+..|..
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~  120 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS  120 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGG
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChH
Confidence            22344455 99999999999999999999999988854

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.00  E-value=5.7e-05  Score=56.15  Aligned_cols=99  Identities=12%  Similarity=0.110  Sum_probs=58.7

Q ss_pred             CCCcceeEEEEEEecCCHHHHHHHHHHhhCCEEEEEeecCcccccCCCCceEEEE-EEE--CCeEEEEecCC-CC--Ccc
Q 031118           20 AASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQ-LEI--AGSTFLVSDVS-GD--SAA   93 (165)
Q Consensus        20 ~~~m~~~~~~l~v~~~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~g~~~~v~~~~-l~~--g~~~l~l~d~~-~~--~~~   93 (165)
                      +.||+. +.||.+.++|++++++||.++||+.........+. .+..  ..+... +..  +...+-+.... +.  ...
T Consensus        17 ~~gl~~-IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di-~~~~--~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sq   92 (230)
T d1sqda2          17 DYGIRR-LDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDV-GTAE--SGLNSAVLASNDEMVLLPINEPVHGTKRKSQ   92 (230)
T ss_dssp             CSSEEE-EEEEEEECSCHHHHHHHHHHHHCCEEEEEEC-----------CCEEEEEEECTTSCSEEEEEEECCC---CCH
T ss_pred             CCCcCc-cCcceecccCHHHHHHHHHHHcCCeeeEEeccccc-ccce--eeEeeccccCCCcccceeEEeecCCCCCcch
Confidence            445764 68888888899999999999999988766422210 0010  111222 222  22344443321 11  010


Q ss_pred             -----cccCCccE-EEEEEeCCHHHHHHHHHHCCC
Q 031118           94 -----AQTVGTGC-VLCLETEDVEAAVAKAVSAGA  122 (165)
Q Consensus        94 -----~~~~~~~~-~i~~~V~dv~~~~~~~~~~G~  122 (165)
                           ....+.++ ||+|.|+|+.++.++++++|.
T Consensus        93 i~~FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          93 IQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHHHHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence                 12345565 999999999999999988643

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=81.69  E-value=3.6  Score=24.50  Aligned_cols=48  Identities=25%  Similarity=0.250  Sum_probs=33.5

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEEecCcccccccCCceEEEEEcCCCCeEEEEeee
Q 031118          102 VLCLETEDVEAAVAKAVS-AGAVAEGELAEGNGACCGERVGKVKDPYGFTWLICSPV  157 (165)
Q Consensus       102 ~i~~~V~dv~~~~~~~~~-~G~~i~~~p~~~~~~~~G~~~~~~~DP~G~~~~l~~~~  157 (165)
                      |+.|.|.|++++.+-..+ .|.++...+        +....++.+..+..+.+....
T Consensus         6 Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~   54 (113)
T d1xqaa_           6 HLNLTVADVVAAREFLEKYFGLTCSGTR--------GNAFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEE--------TTTEEEEECTTCCEEEEEECS
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCEEEEee--------cCcceeeeecceeeeeeeeee
Confidence            899999999998433333 577765432        335677888888888887654