Citrus Sinensis ID: 031133

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEVD
Secondary Structure (PSIPRED)
ccccccccccEEEEEEcccEEEEEEccccHHHHHHHccccEEEcccccccccccccccccccEEEEEcccccccHHHHHHHHHcHHHHHccccccccEEEEEEEccHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEcEEEEEEEccccEEEEccccEHHHHHHHccccEEEccccccccccccHHHccccEEEEEEcccccccccccEEEEccccccccccccccEEEEEEEEcHHHHHHHHHHccccEEEHHHHHHHHHHcccccccEcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MGNCLMLEEKVIKVMKTDgkileykapmKVQDVLAEFAghaisdsfpeirhlmpdfkllggnlyflvpvplpspkvekkkvrfseeeardgaketSSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWlqgkqstnsqavgfqdggnnnegwkpelesipevd
Flexible Loop (DISEMBL)
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPvplpspkvekkkvrfseeeardgaketssvvrIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKqstnsqavgfqdggnnnegwkpelesipevd
Low Complexity Region (SEG)
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETssvvrikvviskQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEVD
Disordered region (IsUnstruct)
***CLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPL**************************VVRIKVVISKQELQDLQMLQKGGVVSVQDVASWL**********************************
Disordered Region (DISOPRED)
MGNC***EEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSF**********KLLGGNLYFLVPV*****************************************************************************************ESI****
Disordered Region (DISEMBL)
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPLPSPK*********************SVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPE********
Disordered Region (DISPRO)
*GNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPLPSPKVEKKKVRFSEE*A*****ETSSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGK*****QA*G**********WKPE********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLGGNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q6NLC8	225	Uncharacterized protein A	no	no	0.418	0.306	0.337	0.0001

>sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 1  MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRH-------LM 53
          MGN + ++ K  KVMK DG+    K P+  ++V A++ G+ + DS   ++H       L 
Sbjct: 1  MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDS-QAVKHFGVRSKPLE 59

Query: 54 PDFKLLGGNLYFLVPVP 70
          P+  L     YFLV +P
Sbjct: 60 PNQTLKPKKTYFLVELP 76

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
224088567	164	predicted protein [Populus trichocarpa]	0.957	0.963	0.626	1e-46
255575713	157	conserved hypothetical protein [Ricinus	0.939	0.987	0.610	2e-43
225440876	160	PREDICTED: uncharacterized protein LOC10	0.969	1.0	0.557	2e-42
224140107	159	predicted protein [Populus trichocarpa]	0.927	0.962	0.578	4e-39
356534211	162	PREDICTED: uncharacterized protein LOC10	0.963	0.981	0.542	3e-38
351724183	155	uncharacterized protein LOC100500042 [Gl	0.933	0.993	0.548	2e-37
359807179	156	uncharacterized protein LOC100780959 [Gl	0.939	0.993	0.542	2e-36
356548433	161	PREDICTED: uncharacterized protein LOC10	0.939	0.962	0.520	1e-35
147794499	193	hypothetical protein VITISV_021816 [Viti	0.806	0.689	0.565	3e-35
388518935	164	unknown [Lotus japonicus]	0.921	0.926	0.536	2e-34

>gi|224088567|ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|222854452|gb|EEE91999.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/166 (62%), Positives = 130/166 (78%), Gaps = 8/166 (4%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL+L+  VIKVMK DGKILEY+AP+KVQ VL++F+GHAI+DS    +HL PD  LLG
Sbjct: 1   MGNCLVLQANVIKVMKPDGKILEYQAPIKVQQVLSDFSGHAIADSLQAFQHLPPDTSLLG 60

Query: 61  G-NLYFLVPVPLPSPKVEKKKVRFS--EEEARDGAKETSSVVRIKVVISKQELQDLQMLQ 117
           G +LY+LVP+ LPSP+ +KKKVRFS  EEEA+D  ++TS+VVRIK+VISKQELQ+  ML+
Sbjct: 61  GDHLYYLVPLQLPSPQAKKKKVRFSIPEEEAKDVQEKTSTVVRIKLVISKQELQE--MLR 118

Query: 118 KGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPE 163
           KGG VSV D+ S LQG+Q    Q V      + ++GWKPELESIPE
Sbjct: 119 KGG-VSVDDMVSHLQGQQRV--QKVDISGSDSEHKGWKPELESIPE 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575713|ref|XP_002528756.1| conserved hypothetical protein [Ricinus communis] gi|223531850|gb|EEF33668.1| conserved hypothetical protein [Ricinus communis]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/167 (61%), Positives = 131/167 (78%), Gaps = 12/167 (7%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNC++L+EKV+KVMK DGKILEY+AP++VQ VL+EF+GHAISDS  + +HL+PD KL G
Sbjct: 1   MGNCIVLQEKVVKVMKPDGKILEYRAPVRVQQVLSEFSGHAISDSLQDFQHLLPDTKLHG 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFS--EEEARDGAKETSSVVRIKVVISKQELQDLQMLQK 118
           G+LY+LV +PLPSP+V KKKVRFS  EEE +   KET + VRIK+VISKQELQ++  L+K
Sbjct: 61  GSLYYLVALPLPSPEV-KKKVRFSIPEEENK---KETGA-VRIKLVISKQELQEI--LRK 113

Query: 119 GGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEVD 165
           GG VSV  + S LQG+Q  +   V   D  + ++GWKP LESIPE+D
Sbjct: 114 GG-VSVDYMISQLQGQQRVHR--VDTSDNDDCHKGWKPVLESIPEID 157

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440876|ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254636 [Vitis vinifera]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 121/165 (73%), Gaps = 5/165 (3%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL  +EK+IK+M+ DGK+LEYK P+KVQ VL+EF+G AISD+ P I+HL  D +++G
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGG 120
           G LY+L+PVPLPSP+VEKK +RFS+ +    A + + VVRI++VI+KQEL++  ML+KGG
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVE--ADQGTGVVRIRLVITKQELKE--MLRKGG 116

Query: 121 VVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEVD 165
            VSV  + S LQ  Q  N       DG  N  GWKP LESIPEV+
Sbjct: 117 -VSVDHMVSQLQRGQGRNGVHKLDVDGNGNCRGWKPVLESIPEVN 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140107|ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|222868058|gb|EEF05189.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 122/166 (73%), Gaps = 13/166 (7%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL+L+  VIK+MK+DGKILEY+AP+KVQ VL++F  HAI+DS    ++L PD  LLG
Sbjct: 1   MGNCLVLQGNVIKIMKSDGKILEYQAPIKVQQVLSDFCDHAIADSLQAFQYLSPDTNLLG 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFS---EEEARDGAKETSSVVRIKVVISKQELQDLQMLQ 117
           G+LY+LVP+ LPSP  +KKKVRFS   ++E +D  +E +SVVRIK+VISKQEL  ++ML+
Sbjct: 61  GHLYYLVPLQLPSP-AKKKKVRFSIPEDQEVKD-VQEKTSVVRIKLVISKQEL--VEMLR 116

Query: 118 KGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPE 163
           KGG VSV D+ S L G+Q    Q V   D  N    WKP LESIPE
Sbjct: 117 KGG-VSVDDMVSQLHGQQRV--QKVDIPDVVNT---WKPVLESIPE 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534211|ref|XP_003535651.1| PREDICTED: uncharacterized protein LOC100780937 [Glycine max]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/166 (54%), Positives = 118/166 (71%), Gaps = 7/166 (4%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNC++L+E V++VMK+DGKILEYKAP+KV  VL +F GHAIS S P + HL P+ +LL 
Sbjct: 1   MGNCIVLQENVVRVMKSDGKILEYKAPIKVHQVLNQFPGHAISKSLPVLHHLHPNTRLLK 60

Query: 61  GNLYFLVPVPLPSP-KVEKKKVRFSEEEARDGAKET--SSVVRIKVVISKQELQDLQMLQ 117
           G LY+LVP P PSP KV KK+VRF+E +  D   E     VVRIK+V+SKQEL+D+  +Q
Sbjct: 61  GQLYYLVPPPQPSPKKVNKKRVRFAEPDHDDDQVEDKGDEVVRIKLVLSKQELKDI--VQ 118

Query: 118 KGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPE 163
           KGG +SV++V S +QGK       V  +   + + GWKP LE+IPE
Sbjct: 119 KGG-ISVREVLSLVQGKGMDGDVDVCTR-VNDGSHGWKPALETIPE 162

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724183|ref|NP_001236025.1| uncharacterized protein LOC100500042 [Glycine max] gi|255628759|gb|ACU14724.1| unknown [Glycine max]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/164 (54%), Positives = 117/164 (71%), Gaps = 10/164 (6%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL+L+E V+K++KTDGK+LEYK P+KV++VL +F+GHA+S+S   +RHL P  KLL 
Sbjct: 1   MGNCLVLQENVVKIVKTDGKVLEYKTPIKVEEVLIQFSGHAVSESLTVLRHLEPHTKLLR 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGG 120
           G LY+LVP+P PSPK   KKVRF+E E +D  K  S+V RIKVVISKQ+LQ+  MLQ GG
Sbjct: 61  GQLYYLVPLP-PSPKT-NKKVRFAEPEVQDVHK--SNVARIKVVISKQQLQN--MLQNGG 114

Query: 121 VVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEV 164
             SV    S +  ++ T       Q   + ++GWKP LESIPEV
Sbjct: 115 -FSVSKTLSLVHEEKGTEDLP---QKSEDVSQGWKPALESIPEV 154

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807179|ref|NP_001241101.1| uncharacterized protein LOC100780959 [Glycine max] gi|255640840|gb|ACU20703.1| unknown [Glycine max]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 114/164 (69%), Gaps = 9/164 (5%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL+L+E V+K++KTDGK+LEYK P+KV++VL +F+GHA+S+S   +R+L P  KLL 
Sbjct: 1   MGNCLVLQENVVKIVKTDGKVLEYKTPIKVEEVLIQFSGHAVSESLTVLRYLEPHTKLLR 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGG 120
           G LY+LVP+P PSPK   KKVRF+E E +D  K  S+VVRIK+VISKQELQ+  MLQ  G
Sbjct: 61  GQLYYLVPLPPPSPKT-NKKVRFAEPEVQDVHK--SNVVRIKLVISKQELQN--MLQSEG 115

Query: 121 VVSVQDVASWLQGKQSTNSQAVGFQDGGNNNEGWKPELESIPEV 164
             SV  + S +    S        Q    + EGWKP  ESIPEV
Sbjct: 116 -FSVSKMLSLVHEDLSQKGTEYLSQ---KSEEGWKPAFESIPEV 155

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548433|ref|XP_003542606.1| PREDICTED: uncharacterized protein LOC100793955 [Glycine max]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/169 (52%), Positives = 116/169 (68%), Gaps = 14/169 (8%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEI-RHLMPDFKLL 59
           MGNC++L+  V++VMK+DGKILEYKAP++V  VL +F GHAIS+S P +  HL P  +LL
Sbjct: 1   MGNCIVLQRNVVRVMKSDGKILEYKAPIRVHQVLNQFRGHAISESLPPVLHHLNPYTRLL 60

Query: 60  GGNLYFLVPVP-LPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQK 118
            G LY+LVP P   S KV KK+VRF+E +  D  ++   VVRIK+V+SKQEL+D  M+QK
Sbjct: 61  KGQLYYLVPPPQASSKKVNKKRVRFAEPDEDDQVEDKGCVVRIKLVLSKQELKD--MVQK 118

Query: 119 GGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNE----GWKPELESIPE 163
           GG +SV +V S +QGK       VG  D    ++    GWKP LE+IPE
Sbjct: 119 GG-ISVNEVLSLVQGK-----GIVGGVDACRRDDEGFHGWKPALETIPE 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147794499|emb|CAN62766.1| hypothetical protein VITISV_021816 [Vitis vinifera]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 105/138 (76%), Gaps = 5/138 (3%)

Query: 1   MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
           MGNCL  +EK+IK+M+ DGK+LEYK P+KVQ VL+EF+G AISD+ P I+HL  D +++G
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 61  GNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQKGG 120
           G LY+L+PVPLPSP+VEKK +RFS+ +    A   + VVRI++VI+KQEL++  ML+KGG
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVE--ADXGTGVVRIRLVITKQELKE--MLRKGG 116

Query: 121 VVSVQDVASWLQGKQSTN 138
            VSV  + S LQ  Q  N
Sbjct: 117 -VSVDHMVSQLQRGQGRN 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518935|gb|AFK47529.1| unknown [Lotus japonicus]

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/177 (53%), Positives = 121/177 (68%), Gaps = 25/177 (14%)

Query: 1   MGNCL-MLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLL 59
           MGNCL +L+E V++VMKTDGKILEYKA +KV+ VLA+F+GHA+SDS   +RHL P+ KLL
Sbjct: 1   MGNCLVLLQENVVRVMKTDGKILEYKALIKVEQVLADFSGHAVSDSQTGLRHLQPNTKLL 60

Query: 60  GGNLYFLVPVPLPSPKVEK--KKVRFSEEEARDGAKETSSVVRIKVVISKQELQDLQMLQ 117
           GG LY+LV +P P P   K  KKVRF+E E +D  K  SSVVRIK+V+SKQ+L D  MLQ
Sbjct: 61  GGQLYYLVTLPSPPPSPSKARKKVRFAEPEVQDVQK--SSVVRIKLVLSKQQLHD--MLQ 116

Query: 118 KGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNN---------NEGWKPELESIPEVD 165
            GG  SV  + S  QG++         +DGG +         ++GWKP LESI EV+
Sbjct: 117 DGG-FSVNKMLSLAQGEKG--------EDGGEDLLKRREDDVSQGWKPVLESIAEVN 164

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2150695	179	AT5G03890 [Arabidopsis thalian	0.963	0.888	0.352	4.3e-22
TAIR|locus:2100073	173	AT3G10120 "AT3G10120" [Arabido	0.981	0.936	0.375	3e-21
TAIR|locus:2156035	214	AT5G37840 "AT5G37840" [Arabido	0.563	0.434	0.336	6.2e-07
TAIR|locus:2089945	119	AT3G21680 "AT3G21680" [Arabido	0.581	0.806	0.3	6.5e-07
TAIR|locus:2028942	225	AT1G66480 "AT1G66480" [Arabido	0.430	0.315	0.35	5.6e-05
TAIR|locus:2038776	215	At17.1 "AT2G01340" [Arabidopsi	0.515	0.395	0.336	8.3e-05
TAIR|locus:2079572	187	AT3G61920 "AT3G61920" [Arabido	0.369	0.326	0.333	0.00012
TAIR|locus:2010931	203	AT1G64700 "AT1G64700" [Arabido	0.412	0.334	0.373	0.00022
TAIR|locus:2202690	173	AT1G60010 "AT1G60010" [Arabido	0.284	0.271	0.319	0.00026

TAIR|locus:2150695 AT5G03890 [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 62/176 (35%), Positives = 95/176 (53%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDFKLLG 60
             MGNCL++E+KVIK+++ DGK+LEY+ P+ V  +L +F+GH+IS +     HL+PD KLL 
Sbjct:     1 MGNCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHNNT---HLLPDAKLLS 57

Query:    61 GNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAK---ETXXXXXXXXXXXXQELQDLQMLQ 117
             G LY+L+P  +   KV KK V F+  E     +   E              + +++ +++
Sbjct:    58 GRLYYLLPTTMTKKKVNKK-VTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVTVVR 116

Query:   118 KGGVVSVQDVASWLQGK-------QSTNSQAV---GFQDGGNNNEGWKPELESIPE 163
                VV  Q++   LQG        Q+   Q +      D    N GW+P L+SIPE
Sbjct:   117 MKIVVHKQELEKLLQGGSVHEMMYQTLEKQLLLTSSDDDDLECNSGWRPALDSIPE 172

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2100073 AT3G10120 "AT3G10120" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 66/176 (37%), Positives = 95/176 (53%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGH-AISDSFPEIRHLMPDFKLL 59
             MGNCL++E+KVIK+M+ DGK++EY+ PMKV  +L +F+ H ++ DS     HL P  KLL
Sbjct:     1 MGNCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLL 60

Query:    60 GGNLYFLVPVPLPSPKVEKK---KVRFSEEEARDGAKETXXXXXXXXXXXXQELQDLQML 116
              G LY+L+P    S K  KK   KVRF+  E     KE              + +   ++
Sbjct:    61 CGRLYYLLPQETNSIKHMKKTMKKVRFANPEVE---KEEQEEDRLTDCCDNTKEKTNGVV 117

Query:   117 QKGGVVSVQDVASWLQGK-------QSTNSQAVGFQDGGNNNEGWKPELESIPEVD 165
             +   VVS Q++   LQG        ++   Q +   D   + EGW+P L+SIPE D
Sbjct:   118 RVKMVVSKQELEKLLQGGSVHEMVYRTLAKQHLCDDDDECHKEGWRPLLDSIPETD 173

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2156035 AT5G37840 "AT5G37840" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
 Identities = 34/101 (33%), Positives = 44/101 (43%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFP------EIRHLMP 54
             MGN +M+    +KVMK DG I   K P+   D   E+ G  + DS          + L P
Sbjct:     1 MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query:    55 DFKLLGGNLYFLVPVPLPSPKVEKKKVR-FSEEEARDGAKE 94
             +  L   + YFLV +P P  K  K   R         GAKE
Sbjct:    61 NQILKPNHTYFLVDLP-PVDKRNKLPYRRVMSGNIHVGAKE 100

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2089945 AT3G21680 "AT3G21680" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
 Identities = 30/100 (30%), Positives = 45/100 (45%)

Query:    66 LVPVPLPSPKVEKKKVRF-SEEEARDGAKETXXXXXXXXXXXXQELQDLQMLQKGGVVSV 124
             L P PL    +E+ K  F  EEE+    +E             +EL+ + +  K G+ S+
Sbjct:    19 LDPEPLVK-LLEEGKTSFRGEEESERSTEEESKVVRIKVVVTKKELRQI-LGHKNGINSI 76

Query:   125 QDVASWLQGKQSTNSQAVGFQDGGNN-NEGWKPELESIPE 163
             Q +   L+      S A   +D     +E W+P LESIPE
Sbjct:    77 QQLVHVLKDSGRNISMASYEEDEKEEGDENWRPTLESIPE 116

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2028942 AT1G66480 "AT1G66480" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRH-------LM 53
             MGN + ++ K  KVMK DG+    K P+  ++V A++ G+ + DS   ++H       L 
Sbjct:     1 MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDS-QAVKHFGVRSKPLE 59

Query:    54 PDFKLLGGNLYFLVPVP-LP 72
             P+  L     YFLV +P LP
Sbjct:    60 PNQTLKPKKTYFLVELPKLP 79

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2038776 At17.1 "AT2G01340" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 32/95 (33%), Positives = 48/95 (50%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRH-------LM 53
             MGN L   +K  KVMK DG+  + K P+  ++VL +F GH + DS   ++H       L 
Sbjct:     1 MGNSLG-GKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDS-ESVKHYGARAKPLE 58

Query:    54 PDFKLLGGNLYFLV-PVPLPSPKVEKKKVRFSEEE 87
                +L    LYF+V PV    P+  +  +  S +E
Sbjct:    59 AKQRLEAKRLYFVVEPVKECPPRRVRSGIHVSAKE 93

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2079572 AT3G61920 "AT3G61920" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query:     8 EEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIRHLMPDF----KLLGGNL 63
             ++ +IKV+  +G ++E   P+  + +  EF GH I DS   +RH  P      +L  GN+
Sbjct:    19 DDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSL-SLRHSSPPLLHGEELFPGNI 77

Query:    64 YFLVPV 69
             Y+L+P+
Sbjct:    78 YYLLPL 83

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2010931 AT1G64700 "AT1G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query:     1 MGNCLM--L----EEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEI-RHLM 53
             MGNCL   L    E+ +IKV+K+DG +LE+ +P+    V   F+GHA+  +   + + L 
Sbjct:     1 MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query:    54 PDFKLLGGNLYFLVP 68
              D  L+ G  Y+L P
Sbjct:    61 HDHLLVPGQSYYLFP 75

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2202690 AT1G60010 "AT1G60010" [Arabidopsis thaliana (taxid:3702)]

 Score = 83 (34.3 bits), Expect = 0.00026, Sum P(3) = 0.00026
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query:     1 MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFP 47
             MGNC  ++   + +   DGKI  Y  P+ V +++  + GH +S   P
Sbjct:     1 MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIP 47

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0006833 "water transport" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013005301 hypothetical protein (164 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
pfam14009	181	pfam14009, DUF4228, Domain of unknown function (DU	1e-31

>gnl|CDD|222492 pfam14009, DUF4228, Domain of unknown function (DUF4228)

 Score =  111 bits (280), Expect = 1e-31
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 38/191 (19%)

Query: 1   MGNCLML------EEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDS---FPEIR- 50
           MGNCL            +KV+  DGK+ EY  P+   +++ E+ GH + DS   +   R 
Sbjct: 1   MGNCLSCCLAPSGAAATVKVVHPDGKVREYSRPVTAAELMLEYPGHFVCDSDSLYIGRRI 60

Query: 51  -HLMPDFKLLGGNLYFLVPVP-LPSPK--VEKKKVRFSEEEARDGAKETSS--------- 97
             L PD +L  G LYFL+P   L S     +   +  S   A   A    S         
Sbjct: 61  PALPPDDELERGQLYFLLPAERLQSVLAAKDMASLASSASSALKSASAKRSSSSRPSPVR 120

Query: 98  -----VVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNNNE 152
                VVR+KVV+SK+EL++  +L++G   SV    S     +   +  +  +  G+ + 
Sbjct: 121 KSDGGVVRVKVVVSKEELEE--LLEEG---SVSASLS-----ELCETPELRKRSRGSRSR 170

Query: 153 GWKPELESIPE 163
            W+P+LE+I E
Sbjct: 171 SWRPKLETISE 181

This domain is found in plants. The function is not known. Length = 181

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PF14009	181	DUF4228: Domain of unknown function (DUF4228)	100.0

>PF14009 DUF4228: Domain of unknown function (DUF4228)

Probab=100.00  E-value=3.8e-38  Score=244.80  Aligned_cols=153  Identities=35%  Similarity=0.603  Sum_probs=112.8

Q ss_pred             CCCcccC------CCceeEEEecCCcEEEEeCCccHHHHHhhcCCcEEeCCC-----CCccCCCCCCccCCCCeEEEeeC
Q 031133            1 MGNCLML------EEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSF-----PEIRHLMPDFKLLGGNLYFLVPV   69 (165)
Q Consensus         1 MGNC~~~------~~~~iKV~~~dG~v~e~~~Pv~a~evl~~~Pgh~v~~s~-----~~~~~L~~de~L~~G~lYfLlP~   69 (165)
                      ||||++.      ..++||||++||+|++|+.||+|+|||.+|||||||++.     ..+++|+||++|++|++|||||.
T Consensus         1 MGn~~~~~~~~~~~~~~vkvv~~~G~v~~~~~pv~a~evm~~~P~h~v~~~~~~~~~~~~~~l~~d~~L~~G~~Y~llP~   80 (181)
T PF14009_consen    1 MGNCVSCCLASSSSAATVKVVHPDGKVEEFKRPVTAAEVMLENPGHFVCDSDSFRFGRRIKPLPPDEELQPGQIYFLLPM   80 (181)
T ss_pred             CCCcccccccccCCCceEEEEcCCCcEEEeCCCcCHHHHHHHCCCCEEeccccccCCCcccCCCccCeecCCCEEEEEEc
Confidence            9999974      689999999999999999999999999999999998774     24689999999999999999999


Q ss_pred             CCCCCcc---ccceeecchhhhh--------------cCcCCCCceEEEEEEEcHHHHHHHHHHhcCCcccHHHHHHHHh
Q 031133           70 PLPSPKV---EKKKVRFSEEEAR--------------DGAKETSSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQ  132 (165)
Q Consensus        70 ~~~~~~~---~~~~vr~~~~~~e--------------~~~~~~~~~~rvKi~itk~~l~~l~~~~~~~~~s~e~~l~~l~  132 (165)
                      ++.....   ....+.+......              .....++|.++||++++|+||++  ++.++   +.+++++.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rvki~isk~el~~--~l~~~---s~~~~~~~~~  155 (181)
T PF14009_consen   81 SRLQSVLSASDMASLASSASSASSSSSARKSSSRPFSRSRSSNGGVVRVKIVISKEELEE--LLSEG---SDEEMLSESC  155 (181)
T ss_pred             cccCcccccchhcccccchhhccccccccccccccccccccccCcccccccccCHHHHHH--HHhcc---ccchhhhhhh
Confidence            9865421   1222222221110              11355678999999999999999  55533   4455555544


Q ss_pred             hcccccccccccccCCCCCCCccccCCCCCC
Q 031133          133 GKQSTNSQAVGFQDGGNNNEGWKPELESIPE  163 (165)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~WrP~LeSIpE  163 (165)
                      ........     ......++|||+||||||
T Consensus       156 ~~~~~~~~-----~~~~~~~~WrP~LesI~E  181 (181)
T PF14009_consen  156 RRPRRRSS-----RRGSRSRSWRPALESIPE  181 (181)
T ss_pred             cccccccc-----ccCCCCCCccCCCCCcCc
Confidence            43221100     123456899999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00