Citrus Sinensis ID: 031196

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHccccEEEEcccHHHHHHHHHcccccccccEEEEEccccccccccHHHHHHHHHHccccccEEEEHHcccccHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcHHHHHHHHHHccEEEEcccEEEEEccccccccccHHHHHHHHHHcccEEEEEEEEEEccccHHHHHccccEccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcccc
Coil and Loop (DISEMBL)
MVEEKADKILSESQESNVAFLVvgdpfgatthTDLVVRAKKLGIQVKAVHNASVMNAVGICGlqlyrfgetvsipfftetwrpgsfyekikrnrslglhtLCLLDirvkepsleslcrgkklyepprymtVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Flexible Loop (DISEMBL)
mveekadkILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFftetwrpgsfyeKIKRNRSLGLHTLCLLDirvkepsleslcrgkklyepprYMTVNIAIEQLLEVELLqgesgkahELKIILKQLQTS
Low Complexity Region (SEG)
MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIeqllevellqgeSGKAHELKIILKQLQTS
Disordered region (IsUnstruct)
*****************VAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL******
Disordered Region (DISOPRED)
M**EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPS*E**C***KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQT*
Disordered Region (DISEMBL)
***********ESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Disordered Region (DISPRO)
***EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQ**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
O81769	277	Probable diphthine syntha	yes	no	0.902	0.534	0.798	3e-67
Q9CWQ0	281	Diphthine synthase OS=Mus	yes	no	0.853	0.498	0.7	1e-57
Q9H2P9	285	Diphthine synthase OS=Hom	yes	no	0.853	0.491	0.692	9e-57
Q5E982	285	Diphthine synthase OS=Bos	yes	no	0.853	0.491	0.685	9e-57
Q6BN80	300	Diphthine synthase OS=Deb	yes	no	0.908	0.496	0.651	8e-56
Q6C1E0	300	Diphthine synthase OS=Yar	yes	no	0.865	0.473	0.647	2e-55
Q75JG8	273	Diphthine synthase OS=Dic	yes	no	0.896	0.538	0.639	5e-55
Q59NX9	299	Diphthine synthase OS=Can	N/A	no	0.908	0.498	0.624	2e-54
Q7S949	287	Diphthine synthase OS=Neu	N/A	no	0.865	0.494	0.640	7e-53
Q6FXK9	298	Diphthine synthase OS=Can	yes	no	0.957	0.526	0.585	3e-52

>sp|O81769|DPH5_ARATH Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1

 Score =  253 bits (647), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 134/149 (89%), Gaps = 1/149 (0%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMNAVGI
Sbjct: 65  MVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMNAVGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCR-G 119
           CGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESLCR G
Sbjct: 125 CGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESLCRGG 184

Query: 120 KKLYEPPRYMTVNIAIEQLLEVELLQGES 148
           KK YEPPRYM+VN AIEQLLEVE   G+S
Sbjct: 185 KKQYEPPRYMSVNTAIEQLLEVEQKHGDS 213

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 9EC: 8

>sp|Q9CWQ0|DPH5_MOUSE Diphthine synthase OS=Mus musculus GN=Dph5 PE=2 SV=2

 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 98/140 (70%), Positives = 123/140 (87%)

Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
           VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct: 61  VEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMNAVGCC 120

Query: 62  GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
           GLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLLDI+VKE SLE+L RG+K
Sbjct: 121 GLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLLDIKVKEQSLENLIRGRK 180

Query: 122 LYEPPRYMTVNIAIEQLLEV 141
           +YEPPRYM+VN A +QLLE+
Sbjct: 181 IYEPPRYMSVNQAAQQLLEI 200

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2

 Score =  219 bits (557), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 97/140 (69%), Positives = 123/140 (87%)

Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
           VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MNAVG C
Sbjct: 61  VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120

Query: 62  GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
           GLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L +G+K
Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180

Query: 122 LYEPPRYMTVNIAIEQLLEV 141
           +YEPPRYM+VN A +QLLE+
Sbjct: 181 IYEPPRYMSVNQAAQQLLEI 200

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q5E982|DPH5_BOVIN Diphthine synthase OS=Bos taurus GN=DPH5 PE=2 SV=1

 Score =  218 bits (556), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 96/140 (68%), Positives = 123/140 (87%)

Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
           VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct: 61  VEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMNAVGCC 120

Query: 62  GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
           GLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L +G+K
Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180

Query: 122 LYEPPRYMTVNIAIEQLLEV 141
           +YEPPRYM+VN A +QLLE+
Sbjct: 181 IYEPPRYMSVNQAAQQLLEI 200

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6BN80|DPH5_DEBHA Diphthine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DPH5 PE=3 SV=1

 Score =  215 bits (548), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 97/149 (65%), Positives = 122/149 (81%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           +VE  +DKIL  + E +VAFLVVGDPFGATTHTDL++RA++L I+V+A+HNASVMNAVG 
Sbjct: 61  LVEGGSDKILENADEDDVAFLVVGDPFGATTHTDLIIRARELNIKVEAIHNASVMNAVGA 120

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLY+FG+TVS+ FFTETW+P SFY KI  NR +GLHTL LLDI+VKE S+E++ RGK
Sbjct: 121 CGLQLYQFGQTVSLVFFTETWKPDSFYNKIMENRRIGLHTLLLLDIKVKEQSIENMARGK 180

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
            +YEPPRYM +  A  QLLE+E ++ E  
Sbjct: 181 LIYEPPRYMNIETAASQLLEIEEMRQEKA 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6C1E0|DPH5_YARLI Diphthine synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DPH5 PE=3 SV=1

 Score =  214 bits (545), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 121/142 (85%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVE+ +D IL+ +QE ++AFLVVGDPFGATTHTDLV+RA++LGI+ + +HNASVMNAVG 
Sbjct: 61  MVEQASDDILAGAQEDDIAFLVVGDPFGATTHTDLVIRARELGIKYQTIHNASVMNAVGA 120

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLY FG+TVS+ FFT++W+P SFY+KI  NR +GLHTL LLDI+VKE S+E++ RG+
Sbjct: 121 CGLQLYNFGQTVSLVFFTDSWKPDSFYDKIHENRKIGLHTLVLLDIKVKEQSIENIMRGR 180

Query: 121 KLYEPPRYMTVNIAIEQLLEVE 142
            ++EPPRYM++  A  QLLE+E
Sbjct: 181 NVFEPPRYMSIEQAASQLLEIE 202

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q75JG8|DPH5_DICDI Diphthine synthase OS=Dictyostelium discoideum GN=dph5 PE=3 SV=1

 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 94/147 (63%), Positives = 125/147 (85%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MNA+G 
Sbjct: 63  MVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMNAIGC 122

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLLDI+VKE S+E++CRG+
Sbjct: 123 CGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLLDIKVKEQSIENMCRGR 182

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGE 147
            +YEPPR+MTVN  IEQLLE+E ++ E
Sbjct: 183 LIYEPPRFMTVNQCIEQLLEIEEIRKE 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q59NX9|DPH5_CANAL Diphthine synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DPH5 PE=3 SV=1

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 93/149 (62%), Positives = 123/149 (82%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           +VE  +D IL ++ + +VAFLVVGDPFGATTHTDLV+RA++LGI+V+ +HNASVMNAVG 
Sbjct: 61  LVETGSDDILKDADKEDVAFLVVGDPFGATTHTDLVIRARELGIKVETIHNASVMNAVGA 120

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLY+FG+TVS+ FFT++W+P SFY KI  NR +GLHTL LLDI+VKE S+E++ RG+
Sbjct: 121 CGLQLYQFGQTVSLVFFTDSWKPDSFYGKIMENRKIGLHTLLLLDIKVKEQSIENMARGR 180

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
            +YEPPRYM +  A +QLLE+E ++ E  
Sbjct: 181 LIYEPPRYMDIATAAQQLLEIESIRQEQA 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q7S949|DPH5_NEUCR Diphthine synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dph-5 PE=3 SV=1

 Score =  206 bits (523), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 118/142 (83%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVE  +D+IL ++ + +VAF VVGDPFGATTHTDLV+RA++LGIQV+ V NAS+M+ +G 
Sbjct: 60  MVESNSDEILRDADKVDVAFCVVGDPFGATTHTDLVLRARELGIQVRTVPNASIMSGIGA 119

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
            GLQLY FG+TVS+ FF + WRP SFY++IK NRS+GLHTL LLDI+VKE SLE++ RG+
Sbjct: 120 AGLQLYNFGQTVSMVFFLDNWRPASFYDRIKENRSIGLHTLVLLDIKVKEQSLENMARGR 179

Query: 121 KLYEPPRYMTVNIAIEQLLEVE 142
           K+YEPPRYMTV    +Q+LE+E
Sbjct: 180 KIYEPPRYMTVGTCAQQMLEIE 201

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6FXK9|DPH5_CANGA Diphthine synthase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DPH5 PE=3 SV=1

 Score =  204 bits (518), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 122/157 (77%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           +VE  +  IL ++ + NVAFLVVGDPFGATTHTDLV+RAKK  I V+ +HNASVMNAVG 
Sbjct: 61  LVESGSADILRDADKENVAFLVVGDPFGATTHTDLVLRAKKDKIPVEVIHNASVMNAVGS 120

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLY FG+T+S+ FFT++WRP S+Y+K+  NR +GLHTL LLDI+VKE SLE++ RG+
Sbjct: 121 CGLQLYNFGQTISMVFFTDSWRPDSWYDKVMENRKIGLHTLVLLDIKVKEQSLENMARGR 180

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 157
            +YEPPRYM++    +QLLE+E L+ E     +  ++
Sbjct: 181 LIYEPPRYMSIAQCCQQLLEIEELRAEKAYTADTPVV 217

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
225458011	285	PREDICTED: probable diphthine synthase i	0.908	0.522	0.838	3e-71
353441140	242	granule diphthine synthase [Elaeis guine	0.957	0.648	0.783	1e-69
357466919	274	Diphthine synthase [Medicago truncatula]	0.957	0.572	0.777	7e-69
449469897	286	PREDICTED: probable diphthine synthase-l	0.902	0.517	0.817	1e-68
255538906	285	diphthine synthase, putative [Ricinus co	0.902	0.519	0.837	2e-68
356575604	278	PREDICTED: probable diphthine synthase-l	0.859	0.507	0.836	4e-68
224062019	285	predicted protein [Populus trichocarpa]	0.908	0.522	0.791	6e-68
115453073	274	Os03g0355800 [Oryza sativa Japonica Grou	0.908	0.543	0.785	9e-68
449532549	286	PREDICTED: LOW QUALITY PROTEIN: probable	0.902	0.517	0.810	1e-67
357112131	273	PREDICTED: probable diphthine synthase-l	0.908	0.545	0.785	2e-67

>gi|225458011|ref|XP_002280149.1| PREDICTED: probable diphthine synthase isoform 1 [Vitis vinifera] gi|359492226|ref|XP_003634386.1| PREDICTED: probable diphthine synthase isoform 2 [Vitis vinifera] gi|302142643|emb|CBI19846.3| unnamed protein product [Vitis vinifera]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 125/149 (83%), Positives = 138/149 (92%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD ILS+++ S+V FLVVGDPFGATTH+DLVVRAKKLG+ VK VHNASVMNA+GI
Sbjct: 65  MVEEKADDILSDARHSDVGFLVVGDPFGATTHSDLVVRAKKLGVDVKVVHNASVMNAIGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GET+SIPFFTETWRP SFYEKI+RNR LGLHTLCLLDIRVKEPSLESLCRGK
Sbjct: 125 CGLQLYRYGETISIPFFTETWRPDSFYEKIQRNRVLGLHTLCLLDIRVKEPSLESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
           K YEPPRYMT+N AIEQLLEVE ++GES 
Sbjct: 185 KQYEPPRYMTINTAIEQLLEVEQMRGESA 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|353441140|gb|AEQ94154.1| granule diphthine synthase [Elaeis guineensis]

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 123/157 (78%), Positives = 142/157 (90%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEE+AD +LSE+ ES+VAFLVVGDPFGATTHTDLVVRA+KLGI+VK +HNASVMNAVG+
Sbjct: 65  MVEERADVMLSEASESDVAFLVVGDPFGATTHTDLVVRARKLGIKVKVIHNASVMNAVGV 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIPFFTETWRP SFY+KI+RN+ LGLHTLCLLDIRVKEPSLESLCRG+
Sbjct: 125 CGLQLYRYGETVSIPFFTETWRPDSFYQKIQRNQQLGLHTLCLLDIRVKEPSLESLCRGR 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 157
           K YEPP+YMT++ AI QLLEVE ++ ES  + E K I
Sbjct: 185 KCYEPPKYMTIHTAINQLLEVEEMRRESAYSEESKCI 221

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466919|ref|XP_003603744.1| Diphthine synthase [Medicago truncatula] gi|355492792|gb|AES73995.1| Diphthine synthase [Medicago truncatula]

 Score =  264 bits (675), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 122/157 (77%), Positives = 140/157 (89%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD ILS++Q S+ AFLVVGDPFGATTHTDLVVRAKK+GI+VK VHNASVMNA+GI
Sbjct: 65  MVEEKADDILSQAQLSHSAFLVVGDPFGATTHTDLVVRAKKMGIEVKVVHNASVMNAIGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIPFFTETWRP SFYEKI++NR+LGLHTLCLLDIRVKEP+LESLCRG+
Sbjct: 125 CGLQLYRYGETVSIPFFTETWRPDSFYEKIQQNRNLGLHTLCLLDIRVKEPTLESLCRGR 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 157
           K YEPPRYMT+N AIEQLLE+   + ES    + + +
Sbjct: 185 KAYEPPRYMTINTAIEQLLEISQAREESAYTEDTECV 221

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469897|ref|XP_004152655.1| PREDICTED: probable diphthine synthase-like [Cucumis sativus]

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/148 (81%), Positives = 139/148 (93%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD+ILSE++ S+VAFLVVGD FGATTH+DLVVRAK LGI+V+ V+NASVMNAVGI
Sbjct: 65  MVEEKADQILSEARTSDVAFLVVGDAFGATTHSDLVVRAKSLGIEVRVVYNASVMNAVGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIPFFTETW+P SFYEKI++NR LGLHTLCLLDIRVKEPSLESLCRGK
Sbjct: 125 CGLQLYRYGETVSIPFFTETWKPSSFYEKIQKNRGLGLHTLCLLDIRVKEPSLESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGES 148
           K YEPPR+M++N AIEQLLEVE ++G+S
Sbjct: 185 KEYEPPRFMSINTAIEQLLEVEQMEGQS 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538906|ref|XP_002510518.1| diphthine synthase, putative [Ricinus communis] gi|223551219|gb|EEF52705.1| diphthine synthase, putative [Ricinus communis]

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 124/148 (83%), Positives = 133/148 (89%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD++LS +  S+VAFLVVGDPFGATTHTDLVVRAK LGI VK VHNASVMNAVGI
Sbjct: 65  MVEEKADEMLSAASSSDVAFLVVGDPFGATTHTDLVVRAKTLGIDVKVVHNASVMNAVGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIPFFT+ WRPGSFYEKIK NR LGLHTLCLLDIRVKEPS ESL RG+
Sbjct: 125 CGLQLYRYGETVSIPFFTDNWRPGSFYEKIKTNRDLGLHTLCLLDIRVKEPSWESLSRGR 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGES 148
           K YEPPRYMT+N AIEQLLEVE  +GES
Sbjct: 185 KKYEPPRYMTINTAIEQLLEVEQKRGES 212

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575604|ref|XP_003555929.1| PREDICTED: probable diphthine synthase-like [Glycine max]

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 118/141 (83%), Positives = 133/141 (94%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD+ILSE+  ++VAFLVVGDPFGATTHTDLVVRAKK+ I+VK VHNASVMNA+G+
Sbjct: 65  MVEEKADEILSEADHAHVAFLVVGDPFGATTHTDLVVRAKKMAIEVKVVHNASVMNAIGV 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIPFFTETWRP SFYEKI+RN S+GLHTLCLLDIRVKEP+LESLCRG+
Sbjct: 125 CGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNLSMGLHTLCLLDIRVKEPTLESLCRGR 184

Query: 121 KLYEPPRYMTVNIAIEQLLEV 141
           K YEPPRYMT+N AIEQLLE+
Sbjct: 185 KAYEPPRYMTINTAIEQLLEI 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062019|ref|XP_002300714.1| predicted protein [Populus trichocarpa] gi|222842440|gb|EEE79987.1| predicted protein [Populus trichocarpa]

 Score =  261 bits (667), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 118/149 (79%), Positives = 136/149 (91%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEK D +LSE+   +VAFLVVGDPFGATTHTDLVVRAK+LG++VK +HNASVMNAVGI
Sbjct: 65  MVEEKVDSVLSEATSFDVAFLVVGDPFGATTHTDLVVRAKELGVEVKVIHNASVMNAVGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GET+SIPFFT+TW+P SFYEKI+RNR LGLHTLCLLDI+VKEP+ ESLCRGK
Sbjct: 125 CGLQLYRYGETISIPFFTDTWKPDSFYEKIQRNRELGLHTLCLLDIKVKEPTWESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
           KLYEPPR+MT+N AIEQLLE+E  +GES 
Sbjct: 185 KLYEPPRFMTINTAIEQLLEIEQNRGESA 213

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115453073|ref|NP_001050137.1| Os03g0355800 [Oryza sativa Japonica Group] gi|108708216|gb|ABF96011.1| diphthine synthase, putative, expressed [Oryza sativa Japonica Group] gi|108708217|gb|ABF96012.1| diphthine synthase, putative, expressed [Oryza sativa Japonica Group] gi|113548608|dbj|BAF12051.1| Os03g0355800 [Oryza sativa Japonica Group] gi|215737383|dbj|BAG96312.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  261 bits (666), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 117/149 (78%), Positives = 137/149 (91%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEE+AD++L E+ +++VAFLVVGDPFGATTHTDLVVRAK +G++VK +HNASVMNAVG+
Sbjct: 65  MVEERADQMLREAADADVAFLVVGDPFGATTHTDLVVRAKNMGVEVKVIHNASVMNAVGV 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GET+SIPFFTETWRP SFYEKI+ NR LGLHTLCLLDIRVKEP+LESLCRGK
Sbjct: 125 CGLQLYRYGETISIPFFTETWRPDSFYEKIQNNRRLGLHTLCLLDIRVKEPTLESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
           K+YEPPR+M+VN AI QLLEVE L+G S 
Sbjct: 185 KVYEPPRFMSVNTAISQLLEVEELRGGSA 213

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532549|ref|XP_004173243.1| PREDICTED: LOW QUALITY PROTEIN: probable diphthine synthase-like [Cucumis sativus]

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 120/148 (81%), Positives = 138/148 (93%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEEKAD+ILSE++ S+VAFLVVGD FGATTH+DLVVRAK LGI+V+ V+NASVMNAVGI
Sbjct: 65  MVEEKADQILSEARTSDVAFLVVGDAFGATTHSDLVVRAKSLGIEVRVVYNASVMNAVGI 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GETVSIP FTETW+P SFYEKI++NR LGLHTLCLLDIRVKEPSLESLCRGK
Sbjct: 125 CGLQLYRYGETVSIPXFTETWKPSSFYEKIQKNRGLGLHTLCLLDIRVKEPSLESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGES 148
           K YEPPR+M++N AIEQLLEVE ++G+S
Sbjct: 185 KEYEPPRFMSINTAIEQLLEVEQMEGQS 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112131|ref|XP_003557863.1| PREDICTED: probable diphthine synthase-like [Brachypodium distachyon]

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/149 (78%), Positives = 137/149 (91%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEE++D++LSE+ +++VAFLVVGDPFGATTHTDLVVRAK +G++VK +HNASVMNAVG+
Sbjct: 65  MVEERSDQMLSEATDADVAFLVVGDPFGATTHTDLVVRAKSIGVEVKVIHNASVMNAVGV 124

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
           CGLQLYR+GET+SIPFFTETWRP SFYEKI+ +R LGLHTLCLLDIRVKEP+LESLCRGK
Sbjct: 125 CGLQLYRYGETISIPFFTETWRPDSFYEKIQNSRRLGLHTLCLLDIRVKEPTLESLCRGK 184

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESG 149
           K+YEPPR+MTVN AI QLLEVE L G S 
Sbjct: 185 KVYEPPRFMTVNTAISQLLEVEELHGGSA 213

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2124859	277	AT4G31790 [Arabidopsis thalian	0.823	0.487	0.808	4.2e-56
MGI|MGI:1916990	281	Dph5 "DPH5 homolog (S. cerevis	0.810	0.473	0.706	1.2e-49
ZFIN|ZDB-GENE-041114-85	288	dph5 "DPH5 homolog (S. cerevis	0.798	0.454	0.725	2.5e-49
RGD|1307867	281	Dph5 "DPH5 homolog (S. cerevis	0.810	0.473	0.699	3.2e-49
UNIPROTKB|Q9H2P9	285	DPH5 "Diphthine synthase" [Hom	0.810	0.466	0.699	4.1e-49
UNIPROTKB|Q5E982	285	DPH5 "Diphthine synthase" [Bos	0.810	0.466	0.691	5.2e-49
UNIPROTKB|E2RQL8	280	DPH5 "Uncharacterized protein"	0.810	0.475	0.669	8.5e-49
UNIPROTKB|F1S569	285	DPH5 "Uncharacterized protein"	0.810	0.466	0.684	2.3e-48
UNIPROTKB|F1P418	286	DPH5 "Uncharacterized protein"	0.810	0.465	0.676	8.8e-47
DICTYBASE|DDB_G0276115	273	dph5 "diphthamide biosynthesis	0.823	0.494	0.644	1.1e-46

TAIR|locus:2124859 AT4G31790 [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 110/136 (80%), Positives = 124/136 (91%)

Query:     1 MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
             MVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMNAVGI
Sbjct:    65 MVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMNAVGI 124

Query:    61 CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG- 119
             CGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESLCRG 
Sbjct:   125 CGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESLCRGG 184

Query:   120 KKLYEPPRYMTVNIAI 135
             KK YEPPRYM+VN AI
Sbjct:   185 KKQYEPPRYMSVNTAI 200

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA;ISS

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

MGI|MGI:1916990 Dph5 "DPH5 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 94/133 (70%), Positives = 117/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLLDI+VKE SLE+L RG+K
Sbjct:   121 GLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLLDIKVKEQSLENLIRGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM+VN A
Sbjct:   181 IYEPPRYMSVNQA 193

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0032259 "methylation" evidence=IEA

ZFIN|ZDB-GENE-041114-85 dph5 "DPH5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 95/131 (72%), Positives = 114/131 (87%)

Query:     1 MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
             MVE++AD+IL  +   +VAFLVVGDPFGATTH+DLV+RA   GIQ + +HNASVMNAVG 
Sbjct:    60 MVEQQADEILKGADVCDVAFLVVGDPFGATTHSDLVLRALNAGIQYRVIHNASVMNAVGC 119

Query:    61 CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
             CGLQLY FGETVSI F+T+TWRP SFY+KIK+NR +GLHTLCLLDI+VKE S+E+L RG+
Sbjct:   120 CGLQLYNFGETVSIVFWTDTWRPESFYDKIKKNRDMGLHTLCLLDIKVKEQSMENLVRGR 179

Query:   121 KLYEPPRYMTV 131
             K+YEPPRYMTV
Sbjct:   180 KIYEPPRYMTV 190

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

RGD|1307867 Dph5 "DPH5 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 93/133 (69%), Positives = 116/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLYRFGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L RG+K
Sbjct:   121 GLQLYRFGETVSIVFWTDTWRPESFFDKVKKNRENGMHTLCLLDIKVKEQSLENLIRGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM+VN A
Sbjct:   181 IYEPPRYMSVNQA 193

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

UNIPROTKB|Q9H2P9 DPH5 "Diphthine synthase" [Homo sapiens (taxid:9606)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 93/133 (69%), Positives = 117/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L +G+K
Sbjct:   121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM+VN A
Sbjct:   181 IYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;NAS

GO:0004164 "diphthine synthase activity" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5E982 DPH5 "Diphthine synthase" [Bos taurus (taxid:9913)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 92/133 (69%), Positives = 117/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L +G+K
Sbjct:   121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM+VN A
Sbjct:   181 IYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|E2RQL8 DPH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 89/133 (66%), Positives = 117/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGISYRVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLY+FGET+SI F+T+TWRP SF++K+K+NR  G+HTLCLLDI++KE SLE+L +G+K
Sbjct:   121 GLQLYKFGETISIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKIKEQSLENLIKGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM++N A
Sbjct:   181 IYEPPRYMSINQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1S569 DPH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 91/133 (68%), Positives = 116/133 (87%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD IL ++   +VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MNAVG C
Sbjct:    61 VEQEADNILKDADIGDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMNAVGCC 120

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L +G+K
Sbjct:   121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRLNGMHTLCLLDIKVKEQSLENLIKGRK 180

Query:   122 LYEPPRYMTVNIA 134
             +YEPPRYM+VN A
Sbjct:   181 IYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1P418 DPH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 90/133 (67%), Positives = 114/133 (85%)

Query:     2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
             VE++AD IL ++   +VAFLVVGDPFGATTH+DLV+RA +LGI  + +HNAS+MNAVG C
Sbjct:    62 VEQEADSILKDADVCDVAFLVVGDPFGATTHSDLVLRAVQLGIPYQVIHNASIMNAVGCC 121

Query:    62 GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKK 121
             GLQLY FGETVSI F+T+TW+P SF++KIKRNR  G+HTLCLLDI+VKE SL++L +G+K
Sbjct:   122 GLQLYNFGETVSIVFWTDTWKPESFFDKIKRNRQNGMHTLCLLDIKVKEQSLDNLMKGRK 181

Query:   122 LYEPPRYMTVNIA 134
             +YEP RYM+VN A
Sbjct:   182 IYEPSRYMSVNQA 194

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

DICTYBASE|DDB_G0276115 dph5 "diphthamide biosynthesis protein 5" [Dictyostelium discoideum (taxid:44689)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 87/135 (64%), Positives = 115/135 (85%)

Query:     1 MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
             MVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MNA+G 
Sbjct:    63 MVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMNAIGC 122

Query:    61 CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
             CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLLDI+VKE S+E++CRG+
Sbjct:   123 CGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLLDIKVKEQSIENMCRGR 182

Query:   121 KLYEPPRYMTVNIAI 135
              +YEPPR+MTVN  I
Sbjct:   183 LIYEPPRFMTVNQCI 197

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0032259 "methylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O81769	DPH5_ARATH	2, ., 1, ., 1, ., 9, 8	0.7986	0.9024	0.5342	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00014439001	RecName- Full=Diphthine synthase; EC=2.1.1.98;; Required for the methylation step in diphthamide biosynthesis (By similarity) (285 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00023426001	SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (426 aa)			•	•		•	•		0.871
	GSVIVG00025739001	SubName- Full=Chromosome chr19 scaffold_35, whole genome shotgun sequence; (508 aa)				•	•		•		0.798
	GSVIVG00021307001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (586 aa)				•					0.736
	GSVIVG00037695001	SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (245 aa)			•	•					0.734
	GSVIVG00032161001	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (428 aa)							•		0.731
	GSVIVG00017697001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (86 aa)				•	•				0.728
	GSVIVG00028481001	SubName- Full=Chromosome chr7 scaffold_44, whole genome shotgun sequence; (316 aa)				•					0.712
	GSVIVG00017910001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (481 aa)			•	•					0.710
	GSVIVG00021672001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (315 aa)				•					0.704
	GSVIVG00022683001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (181 aa)				•			•		0.680

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
PTZ00175	270	PTZ00175, PTZ00175, diphthine synthase; Provisiona	6e-96
cd11647	241	cd11647, Diphthine_synthase, Diphthine synthase, a	3e-78
COG1798	260	COG1798, DPH5, Diphthamide biosynthesis methyltran	6e-59
TIGR00522	257	TIGR00522, dph5, diphthine synthase	2e-52
PRK04160	258	PRK04160, PRK04160, diphthine synthase; Provisiona	3e-49
cd09815	224	cd09815, TP_methylase, S-AdoMet dependent tetrapyr	7e-06
pfam00590	202	pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp	8e-04

>gnl|CDD|185500 PTZ00175, PTZ00175, diphthine synthase; Provisional

 Score =  277 bits (712), Expect = 6e-96
 Identities = 107/142 (75%), Positives = 125/142 (88%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           MVEE  D+IL E++E NVAFLVVGDPF ATTHTDL +RAKK GI+V+ +HNAS+MNA+G 
Sbjct: 62  MVEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGC 121

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
            GLQLYRFGETVSIPFFTETW+P SFY+KIK NR  GLHTLCLLDI+VKE S+E+L +G+
Sbjct: 122 TGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLHTLCLLDIKVKERSVENLMKGR 181

Query: 121 KLYEPPRYMTVNIAIEQLLEVE 142
           K+YEPPRYMT+N AIEQLLEVE
Sbjct: 182 KIYEPPRYMTINQAIEQLLEVE 203

Length = 270

>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5

 Score =  232 bits (594), Expect = 3e-78
 Identities = 87/143 (60%), Positives = 107/143 (74%), Gaps = 16/143 (11%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
            VEE++D+IL E++E +VA LVVGDPF ATTH+DL +RAK+ GI+V+ +HNAS++NAVG 
Sbjct: 61  DVEEESDEILEEAKEKDVALLVVGDPFIATTHSDLRLRAKERGIEVRVIHNASILNAVGS 120

Query: 61  C-GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
           C GLQLY+FG+TV+IPF TE WRP S Y+ IK N S GLHTLCLLDI+VKE         
Sbjct: 121 CSGLQLYKFGKTVTIPFPTEGWRPDSPYDVIKENLSRGLHTLCLLDIKVKE--------- 171

Query: 120 KKLYEPPRYMTVNIAIEQLLEVE 142
                 PRYMT N A EQLLE+E
Sbjct: 172 ------PRYMTANEAAEQLLEIE 188

Diphthine synthase, also known as diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase, participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. It catalyzes the trimethylation step in diphthamide biosynthesis. Diphthamide is the target of diphtheria toxin, which ADP-ribosylates diphthamide and inhibits protein synthesis, leading to host cell death. Length = 241

>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

 Score =  183 bits (467), Expect = 6e-59
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 17/158 (10%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-G 59
            +EE +  IL  +++ +VA LV GDP  ATTH DL + AK+ GI+V+ +H AS++NA  G
Sbjct: 61  DLEENSRSILDRAKDKDVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIINAAIG 120

Query: 60  ICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
           + GLQ Y+FG+TV++PF +E + P S Y+ IK N   GLHTL LLDI+  E         
Sbjct: 121 LTGLQNYKFGKTVTLPFPSENFFPTSPYDVIKENLERGLHTLVLLDIKEDE--------- 171

Query: 120 KKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 157
                  RYMT N A+E LLE E  +G      +   +
Sbjct: 172 -------RYMTANEALELLLEAEERRGRGVLTEDTLAV 202

Length = 260

>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase

 Score =  166 bits (423), Expect = 2e-52
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 16/155 (10%)

Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GI 60
           VEE + +++  ++  +VA LV GDP  ATTHTDL + AK+ GI+ + +H AS+ +AV G+
Sbjct: 62  VEENSFRLIERAKSKDVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISSAVCGL 121

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
            GLQLY+FG+T +I FFT+ +RP + Y  IK NR +GLHTL LLDI  KE          
Sbjct: 122 TGLQLYKFGKTATIVFFTDNYRPQTPYNVIKENRKIGLHTLVLLDIHPKE---------- 171

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK 155
                 R MT+   +E LLE E  +       +  
Sbjct: 172 -----NRAMTIGEGLENLLEEEEKRKTGAITPDTY 201

Alternate name: diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase. This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5 [Protein fate, Protein modification and repair]. Length = 257

>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional

 Score =  158 bits (403), Expect = 3e-49
 Identities = 66/149 (44%), Positives = 91/149 (61%), Gaps = 18/149 (12%)

Query: 1   MVEEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV- 58
            VE++++KI+  E++E NVAFL  GDP  ATTH DL + AKK GI+V+ +H  S+ +A  
Sbjct: 61  DVEQESEKIILEEAKEKNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIYSAAI 120

Query: 59  GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCR 118
            + GLQ Y+FG++V++PF    + P S Y+ IK N   GLHTL LLDI+           
Sbjct: 121 SLTGLQNYKFGKSVTVPFPYGNFFPESPYDVIKDNLERGLHTLVLLDIKADG-------- 172

Query: 119 GKKLYEPPRYMTVNIAIEQLLEVELLQGE 147
                   RYMT N A+E LLE+E  +GE
Sbjct: 173 --------RYMTANEALELLLELEEKRGE 193

Length = 258

>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases

 Score = 43.9 bits (104), Expect = 7e-06
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 3   EEKADKILSE-SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
            E A  +L    Q  +V  LV GDP  A    +L   A+  G+ V+ V   S   AV  
Sbjct: 67  AEVARTLLEAARQGRDVVRLVAGDPLLAGPGAELRAVAEDAGVDVEVVPGVSSATAVPA 125

This family uses S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis. There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared by both pathways and a few enzymes are pathway-specific. Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) are two superfamily members that are not involved in cobalamin biosynthesis. Diphthine synthase participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. RsmI catalyzes the 2-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA using S-adenosylmethionine (Ado-Met) as the methyl donor. Length = 224

>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 25/118 (21%), Positives = 36/118 (30%), Gaps = 10/118 (8%)

Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGIC 61
           + E  +         +V  LV GDP    T + LV   +  GI+V+ +   S + A    
Sbjct: 60  IAELLEAAALLRAGKDVVVLVSGDPLVYGTGSYLVEALEAAGIEVEVIPGISSLQAAAAR 119

Query: 62  -GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCR 118
            G+ L   G            R             L   TL LL        L  +  
Sbjct: 120 LGIPLTDGGVVSLHG------RGLETLRARLLEALLAGDTLVLLTDP---HRLAEIAE 168

This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Dipthine synthase. Length = 202

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
KOG3123	272	consensus Diphthine synthase [Translation, ribosom	100.0
COG1798	260	DPH5 Diphthamide biosynthesis methyltransferase [T	100.0
PTZ00175	270	diphthine synthase; Provisional	100.0
TIGR00522	257	dph5 diphthine synthase. This protein participates	100.0
PRK04160	258	diphthine synthase; Provisional	99.92
TIGR01469	236	cobA_cysG_Cterm uroporphyrin-III C-methyltransfera	99.79
PRK06136	249	uroporphyrin-III C-methyltransferase; Reviewed	99.78
COG2243	234	CobF Precorrin-2 methylase [Coenzyme metabolism]	99.78
PF00590	210	TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth	99.75
TIGR01465	229	cobM_cbiF precorrin-4 C11-methyltransferase. This	99.72
PLN02625	263	uroporphyrin-III C-methyltransferase	99.7
PRK10637	457	cysG siroheme synthase; Provisional	99.68
PRK05991	250	precorrin-3B C17-methyltransferase; Provisional	99.62
PRK05990	241	precorrin-2 C(20)-methyltransferase; Reviewed	99.62
PRK05576	229	cobalt-precorrin-2 C(20)-methyltransferase; Valida	99.62
TIGR01467	230	cobI_cbiL precorrin-2 C20-methyltransferase. This	99.61
PRK05787	210	cobalt-precorrin-6Y C(5)-methyltransferase; Valida	99.59
PRK05948	238	precorrin-2 methyltransferase; Provisional	99.59
TIGR02434	249	CobF precorrin-6A synthase (deacetylating). This m	99.52
PRK08284	253	precorrin 6A synthase; Provisional	99.51
PRK15473	257	cbiF cobalt-precorrin-4 C(11)-methyltransferase; P	99.48
PRK14994	287	SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-	99.46
TIGR01466	239	cobJ_cbiH precorrin-3B C17-methyltransferase. This	99.44
TIGR02467	204	CbiE precorrin-6y C5,15-methyltransferase (decarbo	99.38
PRK05765	246	precorrin-3B C17-methyltransferase; Provisional	99.27
PRK07168	474	bifunctional uroporphyrinogen-III methyltransferas	99.23
PRK15478	241	cbiH cobalt-precorrin-3B C(17)-methyltransferase;	99.14
COG2241	210	CobL Precorrin-6B methylase 1 [Coenzyme metabolism	98.83
COG2875	254	CobM Precorrin-4 methylase [Coenzyme metabolism]	98.82
COG1010	249	CobJ Precorrin-3B methylase [Coenzyme metabolism]	98.8
COG0007	244	CysG Uroporphyrinogen-III methylase [Coenzyme meta	98.7
COG0313	275	Predicted methyltransferases [General function pre	97.79
TIGR00096	276	probable S-adenosylmethionine-dependent methyltran	97.67
COG3956	488	Protein containing tetrapyrrole methyltransferase	97.11
KOG1527	506	consensus Uroporphyrin III methyltransferase [Coen	95.04
PRK15062	364	hydrogenase isoenzymes formation protein HypD; Pro	87.42
PF01924	355	HypD: Hydrogenase formation hypA family; InterPro:	86.87
TIGR00075	369	hypD hydrogenase expression/formation protein HypD	86.79

>KOG3123 consensus Diphthine synthase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=5e-69  Score=448.15  Aligned_cols=163  Identities=66%  Similarity=1.087  Sum_probs=158.7

Q ss_pred             ChhchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCC
Q 031196            1 MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         1 ~vE~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      |||+.++.|++.|.+.|||||++||||.||||++|+.||++.||+|++|||+|+|||+|+||||+|+||++||||||+++
T Consensus        61 mvEq~sd~il~~ad~~dVa~LVVGdPfgATTHsDlvlRAk~~~ipv~vIHNASimNavG~CGLqlY~fGetVSiv~ftd~  140 (272)
T KOG3123|consen   61 MVEQESDKILDEADKEDVAFLVVGDPFGATTHSDLVLRAKELGIPVEVIHNASIMNAVGCCGLQLYNFGETVSIVFFTDN  140 (272)
T ss_pred             HHHhhHHHHhhhhhhcceEEEEecCcccccchhhhheehhhcCCCeEEEechHHHhhhccceeeeeccCcEEEEEEEccC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeee-e
Q 031196           81 WRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-K  159 (164)
Q Consensus        81 ~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~-~  159 (164)
                      |+|+||||+|++|+++|||||||||||+|||++|||+||||+||||||||+|||++||||+|+++++.++++||.||. +
T Consensus       141 wrP~SfydkI~~Nr~~glHTLcLLDIkvkEqs~enl~rgrkiyeppRymsvn~a~~QlLei~e~~~~~~~~edT~~v~~~  220 (272)
T KOG3123|consen  141 WRPESFYDKIKENRQLGLHTLCLLDIKVKEQSVENLARGRKIYEPPRYMSVNEAAEQLLEIEEKRGEPAYTEDTLCVAVA  220 (272)
T ss_pred             cCchhHHHHHHHhhhcCceeEEEEEEeeccHHHHHHhccccccCCchhhhHHHHHHHHHHHHHhhCCCCcCCCceEEEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999874 5


Q ss_pred             cccc
Q 031196          160 QLQT  163 (164)
Q Consensus       160 ~~~~  163 (164)
                      |+|.
T Consensus       221 R~Gs  224 (272)
T KOG3123|consen  221 RVGS  224 (272)
T ss_pred             ecCC
Confidence            6653

>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=4.8e-56  Score=375.29  Aligned_cols=146  Identities=46%  Similarity=0.723  Sum_probs=138.9

Q ss_pred             ChhchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            1 MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         1 ~vE~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      +||++.+.|++.|+++||||||+||||+||||++|+.+|+++||+|++|||+|++||+ |++|||+||||+++|||||++
T Consensus        61 dlE~~~~~il~~a~~~~Vall~~GDpmvATTH~~L~~~A~~~Gi~v~vIh~~Si~~Aa~g~tGL~~YkFG~~vTip~~~~  140 (260)
T COG1798          61 DLEENSRSILDRAKDKDVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIINAAIGLTGLQNYKFGKTVTLPFPSE  140 (260)
T ss_pred             HHhhcchhHHHHHhcCCEEEEecCCcceehhHHHHHHHHHHcCCcEEEEcccHHHHHHhhhhhhheeccCCceEeccccc
Confidence            4788888899999999999999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             CcccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eee
Q 031196           80 TWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IIL  158 (164)
Q Consensus        80 ~~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~  158 (164)
                      +|+|.||||+|++|+++||||||||||+.++                ||||++||++||||+|+++++|++++++. ||+
T Consensus       141 ~~~p~s~yd~Ik~N~~~GLHTl~lLDi~~~~----------------r~Mt~~ea~~~LLe~e~~~~~~~~~~d~~~vvv  204 (260)
T COG1798         141 NFFPTSPYDVIKENLERGLHTLVLLDIKEDE----------------RYMTANEALELLLEAEERRGRGVLTEDTLAVVV  204 (260)
T ss_pred             CcCCCcHHHHHHHhhhcCccceEEEEecccc----------------cccCHHHHHHHHHHHHHHhcCCCcCCCceEEEE
Confidence            9999999999999999999999999999764                89999999999999999999999998777 566


Q ss_pred             eccc
Q 031196          159 KQLQ  162 (164)
Q Consensus       159 ~~~~  162 (164)
                      +|+|
T Consensus       205 aR~G  208 (260)
T COG1798         205 ARAG  208 (260)
T ss_pred             EecC
Confidence            6765

>PTZ00175 diphthine synthase; Provisional

Probab=100.00  E-value=9.8e-55  Score=370.01  Aligned_cols=162  Identities=67%  Similarity=1.040  Sum_probs=154.4

Q ss_pred             hhchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196            2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         2 vE~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +|+.+++|++.|++++||||+.|||++||||.+++.+|+++||++++|||+|++||+|++|+|+|+||+++|||||+++|
T Consensus        63 ~e~~~~~ii~~a~~~~Vv~L~~GDP~i~~t~~~l~~~~~~~gi~vevIPGvSi~sA~~~~Gl~~~~fg~~~sv~~~t~~~  142 (270)
T PTZ00175         63 VEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGCTGLQLYRFGETVSIPFFTETW  142 (270)
T ss_pred             HHHHHHHHHHHhCCCCEEEEECCCCCccCCHHHHHHHHHHCCCcEEEECCcCHHHHHhhcCCCcCCCCceEEEEEEeCCC
Confidence            56667789999988999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeeee-c
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILK-Q  160 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~~-~  160 (164)
                      +|.||||+|++|+++||||||||||+++|+++||||||+++|||||||+++||++||+++|++++++++++++.+++. |
T Consensus       143 ~~~s~~~~i~~n~~~glhTl~lldi~~~~~~~~~~~~~~~~~~~~~~M~~~~a~~~l~~i~~~~~~~~~~~~t~~v~v~r  222 (270)
T PTZ00175        143 KPDSFYDKIKANRDNGLHTLCLLDIKVKERSVENLMKGRKIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVAR  222 (270)
T ss_pred             CCCChhHHHHHHHHcCCceEEEEeeeccccchhhhhccccccCCCcCCCHHHHHHHHHHHHHHHhcCCCCCCCeEEEEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999986554 7


Q ss_pred             ccc
Q 031196          161 LQT  163 (164)
Q Consensus       161 ~~~  163 (164)
                      +|+
T Consensus       223 ~g~  225 (270)
T PTZ00175        223 VGS  225 (270)
T ss_pred             CCC
Confidence            764

>TIGR00522 dph5 diphthine synthase

Probab=100.00  E-value=2.1e-34  Score=242.32  Aligned_cols=146  Identities=44%  Similarity=0.716  Sum_probs=134.3

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+.++++++.+++++|++|+.|||++|+||.+++.++++.|+++++||||||++|+ |++|+|+|+||.+++++|++++|
T Consensus        63 e~~~~~ii~~~~~~~Vv~l~~GDP~i~~~~~~l~~~l~~~~i~vevIPGiSs~~aaaa~~g~~lt~~g~~~~v~~~s~~~  142 (257)
T TIGR00522        63 EENSFRLIERAKSKDVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISSAVCGLTGLQLYKFGKTATIVFFTDNY  142 (257)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCcCcccCCHHHHHHHHHHCCCeEEEECcHhHHHHHHHHcCCCcccCCCcEEEEEecCCc
Confidence            55567888888889999999999999999999999999999999999999999998 99999999999999999999999


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eeeec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IILKQ  160 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~~~  160 (164)
                      +|.++++.+++|+.+++||+||||++.++               .|||++++|+++|++++++..++.+++++. +|+.|
T Consensus       143 ~~~~~~~~~~~~l~~~~~Tlvll~~~~~~---------------~~~M~~~~~~~~l~~~~~~l~~~g~~~~tpv~vv~~  207 (257)
T TIGR00522       143 RPQTPYNVIKENRKIGLHTLVLLDIHPKE---------------NRAMTIGEGLENLLEEEEKRKTGAITPDTYAVVIAR  207 (257)
T ss_pred             CCCCHHHHHHHHHhcCCCcEEEEecccCc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCeEEEEEE
Confidence            99999999999999999999999999765               599999999999999998888888888876 45557


Q ss_pred             ccc
Q 031196          161 LQT  163 (164)
Q Consensus       161 ~~~  163 (164)
                      ++.
T Consensus       208 ~~~  210 (257)
T TIGR00522       208 AGS  210 (257)
T ss_pred             CCC
Confidence            654

This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5.

>PRK04160 diphthine synthase; Provisional

Probab=99.92  E-value=4.3e-24  Score=178.72  Aligned_cols=145  Identities=46%  Similarity=0.725  Sum_probs=126.8

Q ss_pred             hchHHHHH-hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            3 EEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         3 E~~~~~I~-~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      ++..+.++ +.+++++|++|+.|||++|+|+.+++.++++.|+++++||||||++++ |++|+++|+||.++|++|.+..
T Consensus        63 ~~~~~~~~~~~~~~~~Vv~L~sGDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~~~~~g~~~s~~~~~~~  142 (258)
T PRK04160         63 EQESEKIILEEAKEKNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIYSAAISLTGLQNYKFGKSVTVPFPYGN  142 (258)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECChhHHHHHHHHhCCCcccCCceEEEccCcCC
Confidence            33444455 666678999999999999999999999999999999999999999998 9999999999999999998888


Q ss_pred             cccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-ceeeee
Q 031196           81 WRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHE-LKIILK  159 (164)
Q Consensus        81 ~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~-~~~v~~  159 (164)
                      |.|.++.+.|.+++..+.||++||+.+.+                ++||++..++++|++..++..+|.+.++ ..+|+.
T Consensus       143 ~~~~~~~~~i~~~~~~~~~~~vll~~~~~----------------~~~~~~~~~~~~L~~~~~~l~~g~~~~~~~v~V~e  206 (258)
T PRK04160        143 FFPESPYDVIKDNLERGLHTLVLLDIKAD----------------GRYMTANEALELLLELEEKRGEGVISEDTLAVVVA  206 (258)
T ss_pred             cCCCCHHHHHHHHHhcCCCcEEEEEeccC----------------CcccCHHHHHHHHHHHHHHhcccccCCCCEEEEEE
Confidence            88888999999999999999999998754                4789999999999999888888877654 467777


Q ss_pred             cccc
Q 031196          160 QLQT  163 (164)
Q Consensus       160 ~~~~  163 (164)
                      ||+.
T Consensus       207 ~l~~  210 (258)
T PRK04160        207 RAGS  210 (258)
T ss_pred             ecCC
Confidence            7764

>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase

Probab=99.79  E-value=1.1e-18  Score=142.21  Aligned_cols=101  Identities=20%  Similarity=0.144  Sum_probs=81.6

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccC
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG   84 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~   84 (164)
                      +.|.+.++ +++|++|+.|||++|+||.+++.++++.|+++++|||+||++++ |++|++++.+|++-++.|.+.++++.
T Consensus        68 ~~i~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~~~i~~~~~~~~  147 (236)
T TIGR01469        68 RLLVELAREGKKVVRLKGGDPFVFGRGGEEAEALAEAGIPFEVVPGVTSAIAAAAYAGIPLTHRGVASSVTFVTGHEADD  147 (236)
T ss_pred             HHHHHHHHCCCeEEEEeCcCcccccCHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCCcceEEEEEcccCCC
Confidence            33555544 68999999999999999999999999999999999999999998 99999999999765555555566666


Q ss_pred             chHHHHHHHHhcCCccEEEEecc
Q 031196           85 SFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        85 s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      +.++...+++..+.||+|+++-.
T Consensus       148 ~~~~~~~~~~~~~~~~~vl~~~~  170 (236)
T TIGR01469       148 KALEVDWEALAKGAGTLVIYMGV  170 (236)
T ss_pred             cccccCHHHHhcCCCeEEEECCH
Confidence            54433346667777999998743

This model represents enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulfite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities.

>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed

Probab=99.78  E-value=1.5e-18  Score=142.97  Aligned_cols=101  Identities=21%  Similarity=0.165  Sum_probs=83.7

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccC
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG   84 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~   84 (164)
                      +.+.+.++ +++||||+.|||++|+|+.+++.++++.|+++++||||||++|+ |++|++++.+|++.++.|.+.+.++.
T Consensus        71 ~~i~~~~~~g~~V~~l~~GDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~l~~~~~~~~~~~~~~~~~~~  150 (249)
T PRK06136         71 RLLVDYARKGKVVVRLKGGDPFVFGRGGEELEALEAAGIPYEVVPGITAAIAAAAYAGIPLTHRGVARSVTFVTGHEAAG  150 (249)
T ss_pred             HHHHHHHHCCCeEEEEeCCCchhhhcHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCcccCCcceeEEEEecccCCC
Confidence            44556554 68999999999999999999999999999999999999999998 99999999999988877766666666


Q ss_pred             chH-HHHHHHHhcCCccEEEEecc
Q 031196           85 SFY-EKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        85 s~y-~~I~~N~~~glHTlvLLDi~  107 (164)
                      +++ ....+++..+-+|+||++-.
T Consensus       151 ~~~~~~~~~~l~~~~~~~vl~~~~  174 (249)
T PRK06136        151 KLEPEVNWSALADGADTLVIYMGV  174 (249)
T ss_pred             ccccccCHHHHhCCCCeEEEECCH
Confidence            655 33336677777999997654

>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism]

Probab=99.78  E-value=7.9e-19  Score=147.93  Aligned_cols=107  Identities=23%  Similarity=0.302  Sum_probs=87.5

Q ss_pred             hhchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            2 VEEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         2 vE~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      .++.+++|++++. ++||||+|.|||++|+|+++|+.+.+.+|+++++||||||++|+ |++|+++...+++++|     
T Consensus        76 ~~e~a~~va~~l~~G~~VAf~~lGDP~~YsTf~~l~~~l~~~~~e~e~VPGVsS~~a~aa~~~~pL~~g~~~l~V-----  150 (234)
T COG2243          76 WEEAAAEVAAELEAGRDVAFLTLGDPTFYSTFMYLLERLRERGFEVEVVPGVSSFSACAARLGVPLVEGDDSLSV-----  150 (234)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEEccCccHHHHHHHHHHHhhccCCceEEeCCcchHHHHHHHhCCceeccCceeEE-----
Confidence            4677788887777 47999999999999999999999999999999999999999999 9999999999999998     


Q ss_pred             CcccCchHHHHHHHHhcCCccEEEEecccCCchhhh
Q 031196           80 TWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES  115 (164)
Q Consensus        80 ~~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~  115 (164)
                        .|.+--+....-.-....|.|+|++....+.++.
T Consensus       151 --lp~t~~~~~~~~~l~~~d~~VvMK~~~~~~~i~~  184 (234)
T COG2243         151 --LPATRPDEELERALADFDTAVVMKVGRNFEKLRR  184 (234)
T ss_pred             --EeccCchhhHHhHHhhCCeEEEEecCCcHHHHHH
Confidence              5655433333323333489999999865544433

>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family

Probab=99.75  E-value=3.5e-17  Score=130.00  Aligned_cols=126  Identities=25%  Similarity=0.206  Sum_probs=95.3

Q ss_pred             hHHHH--Hhhcc-cCCeEEEecCCCCccccHHHHHHHHHh--CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCC
Q 031196            5 KADKI--LSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFT   78 (164)
Q Consensus         5 ~~~~I--~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~--~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~   78 (164)
                      ..+.|  .+.++ +++|+||+.|||++|+|+.+++.++++  .|+++++|||+||++++ |++|++++.++....+.   
T Consensus        63 ~~~~i~~~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~l~~~~~gi~v~iiPGiSs~~~a~a~~g~~~~~~~~~~~~~---  139 (210)
T PF00590_consen   63 IAEIIEAIEAAKEGKDVVVLVSGDPLFFSTGSYLVRALRAEERGIEVEIIPGISSFQAAAARLGIPLTDGGFISLHG---  139 (210)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESBSTTSSSSHHHHHHHHHHHHTTCEEEEE--TTHHHHHHHHCTSTSSBTTTBEEEE---
T ss_pred             HHHHHHHHHHHhccCCEEEeCCCCCCcccHHHHHHHHHHhhcCCCceEEEecCcHHHHHHHHHcCCcccCcEEEEEE---
Confidence            33445  55555 588999999999999999999988887  99999999999999998 99999999999999996   


Q ss_pred             CCccc-CchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-Cccee
Q 031196           79 ETWRP-GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKA-HELKI  156 (164)
Q Consensus        79 ~~~~P-~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~-~~~~~  156 (164)
                        +.+ ..+......++..+-||+|+|+-.                   +  ++.+.++.|++.       ... ....+
T Consensus       140 --~~~~~~~~~~~l~~~~~~~~~~vil~~~-------------------~--~~~~i~~~L~~~-------~~~~~~~v~  189 (210)
T PF00590_consen  140 --LRDLDTEREKLLENLLANGDTLVILTDP-------------------R--RLAEIAELLLER-------LYPPDTPVA  189 (210)
T ss_dssp             --TSSSSHHHHHHHHHHHTTTSEEEEEESG-------------------C--CHHHHHHHHHHH-------SHTTTSEEE
T ss_pred             --ecccccchHHHHHHHHhCCCEEEEEccC-------------------c--hHHHHHHHHHhh-------CCCCCcEEE
Confidence              222 234555666666667999999764                   1  478888888764       112 23567


Q ss_pred             eeecccc
Q 031196          157 ILKQLQT  163 (164)
Q Consensus       157 v~~~~~~  163 (164)
                      |+.++++
T Consensus       190 v~~~lg~  196 (210)
T PF00590_consen  190 VGERLGY  196 (210)
T ss_dssp             EEESTTS
T ss_pred             HHHhcCC
Confidence            7777764

; InterPro: IPR000878 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including cobalamin (vitamin B12), haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. This entry represents several tetrapyrrole methylases, which consist of two non-similar domains. These enzymes catalyse the methylation of their substrates using S-adenosyl-L-methionine as a methyl source. Enzymes in this family include: Uroporphyrinogen III methyltransferase (2.1.1.107 from EC) (SUMT), which catalyses the conversion of uroporphyrinogen III to precorrin-2 at the first branch-point of the tetrapyrrole synthesis pathway, directing the pathway towards cobalamin or sirohaem synthesis []. Precorrin-2 C20-methyltransferase CobI/CbiL (2.1.1.130 from EC), which introduces a methyl group at C-20 on precorrin-2 to produce precorrin-3A during cobalamin biosynthesis. This reaction is key to the conversion of a porphyrin-type tetrapyrrole ring to a corrin ring []. In some species, this enzyme is part of a bifunctional protein. Precorrin-4 C11-methyltransferase CobM/CbiF (2.1.1.133 from EC), which introduces a methyl group at C-11 on precorrin-4 to produce precorrin-5 during cobalamin biosynthesis []. Sirohaem synthase CysG (2.1.1.107 from EC), domains 4 and 5, which synthesizes sirohaem from uroporphyrinogen III, at the first branch-point in the tetrapyrrole biosynthetic pathway, directing the pathway towards sirohaem synthesis []. Diphthine synthase (2.1.1.98 from EC), which carries out the methylation step during the modification of a specific histidine residue of elongation factor 2 (EF-2) during diphthine synthesis. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 2ZVC_A 2ZVB_A 1WDE_A 3ND1_A 2E0K_A 2E0N_B 1VA0_B 1V9A_A 3I4T_A 3NDC_B ....

>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase

Probab=99.72  E-value=1.1e-16  Score=130.15  Aligned_cols=101  Identities=20%  Similarity=0.135  Sum_probs=76.6

Q ss_pred             HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc-
Q 031196            6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR-   82 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~-   82 (164)
                      .+.|.+.++ +++|+||+.|||++|+++.+++.++++.|+++++|||+||++|+ |++|++++.+|++.++.++..+.+ 
T Consensus        61 ~~~i~~~~~~g~~V~~L~~GDP~~~~~~~~l~~~~~~~g~~veviPGiSS~~aa~a~~g~~l~~~~~~~~~~~~~~~g~~  140 (229)
T TIGR01465        61 VDIMSDAHREGKLVVRLHTGDPSIYGAIAEQMQLLEALGIPYEVVPGVSSFFAAAAALGAELTVPEVSQTVILTRAEGRT  140 (229)
T ss_pred             HHHHHHHHHCCCeEEEEeCcCccccccHHHHHHHHHHCCCCEEEECChhHHHHHHHHcCCCccccCCccEEEEEeccCCC
Confidence            344555555 57999999999999999999999999999999999999999998 999999999998777766554333 


Q ss_pred             cCchHHHHHHHHhcCCccEEEEecc
Q 031196           83 PGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        83 P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      |....+.+..=++.+ .|+++|.-.
T Consensus       141 ~~~~~~~l~~~~~~~-~~~vi~~~~  164 (229)
T TIGR01465       141 PMPEGEKLADLAKHG-ATMAIFLSA  164 (229)
T ss_pred             CCCChHHHHHHhcCC-CeEEEECcH
Confidence            222233343333333 587877654

This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products.

>PLN02625 uroporphyrin-III C-methyltransferase

Probab=99.70  E-value=2.7e-16  Score=132.20  Aligned_cols=102  Identities=22%  Similarity=0.168  Sum_probs=78.1

Q ss_pred             HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCccc
Q 031196            6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRP   83 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P   83 (164)
                      .+.|.+.+. +++|+||+.|||++|+|+.+++.++++.|+++++||||||++++ |++|+++...+.+-++.|-+.++++
T Consensus        82 ~~~i~~~~~~g~~Vvvl~~GDP~~ys~~~~l~~~l~~~~~~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~i~s~h~~~  161 (263)
T PLN02625         82 HELLLSFAEAGKTVVRLKGGDPLVFGRGGEEMDALRKNGIPVTVVPGITAAIGAPAELGIPLTHRGVATSVRFLTGHDRE  161 (263)
T ss_pred             HHHHHHHHHCCCeEEEEcCCCchhhhhHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCccceEEEEecccCC
Confidence            344555544 68999999999999999999999999999999999999999998 9999999998865444444455555


Q ss_pred             CchHH-HHHHHHhcCCccEEEEecc
Q 031196           84 GSFYE-KIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        84 ~s~y~-~I~~N~~~glHTlvLLDi~  107 (164)
                      .+..+ ...+.+..+-+|+|+++-.
T Consensus       162 ~~~~~~~~~~~~~~~~~t~vl~~~~  186 (263)
T PLN02625        162 GGTDPLDVAEAAADPDTTLVVYMGL  186 (263)
T ss_pred             CcccchhhHHHHhCCCCeEEEECch
Confidence            44332 2234445555899999743

>PRK10637 cysG siroheme synthase; Provisional

Probab=99.68  E-value=3.6e-16  Score=140.90  Aligned_cols=99  Identities=20%  Similarity=0.182  Sum_probs=80.3

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccC
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG   84 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~   84 (164)
                      +.|.+.+. +++|+||+.|||++|+|+.+++.++.+.|+++++||||||++|+ |++|++++.++.+-++.+.+.++++.
T Consensus       284 ~~i~~~~~~G~~Vv~L~sGDP~~yg~~~~l~~~l~~~gi~vevVPGISS~~aAaA~~g~pl~~~~~~~~~~vis~h~~~~  363 (457)
T PRK10637        284 QILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTG  363 (457)
T ss_pred             HHHHHHHhCCCEEEEEeCCCccccccHHHHHHHHHhCCCCEEEECCHhHHHHHHHHcCCCcccCCceeeEEEEeCccCCC
Confidence            44555555 57899999999999999999999999999999999999999998 99999999999755555556666665


Q ss_pred             chHHHHHHHHhcCCccEEEEecc
Q 031196           85 SFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        85 s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      ++++  ..++..+.||+||++-.
T Consensus       364 ~~~~--~~~l~~~~~t~Vl~~~~  384 (457)
T PRK10637        364 GELD--WENLAAEKQTLVFYMGL  384 (457)
T ss_pred             CccC--HHHHhCCCCeEEEECCH
Confidence            5443  25566677999986654

>PRK05991 precorrin-3B C17-methyltransferase; Provisional

Probab=99.62  E-value=5.3e-15  Score=123.58  Aligned_cols=122  Identities=18%  Similarity=0.081  Sum_probs=85.6

Q ss_pred             hcccCCeEEEecCCCCccccHHHHHHHHHh-----CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCc
Q 031196           12 ESQESNVAFLVVGDPFGATTHTDLVVRAKK-----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGS   85 (164)
Q Consensus        12 ~a~~~~VafLt~GDP~~aTTH~~l~~ra~~-----~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s   85 (164)
                      .+++++|++|+.|||++|+||.++....++     .|+++++||||||++|+ |++|+++......+++  ..    ..+
T Consensus        69 ~~~g~~Vv~l~~GDP~~~~~~~~l~~~~~~g~~~~~~~~v~vvPGISS~~aa~a~~g~p~~~~~~~~s~--~~----~~~  142 (250)
T PRK05991         69 AAAGANVCVVSGGDPGVFAMAAAVCEAIENGPAAWRAVDLTIVPGVTAMLAVAARIGAPLGHDFCAISL--SD----NLK  142 (250)
T ss_pred             HHCCCeEEEEeCCCchhhhhHHHHHHHHHhcccccCCceEEEECChHHHHHHHHHhCCCCCCCCEEeec--cc----CCC
Confidence            346789999999999999999888887764     46999999999999998 9999999655444443  21    124


Q ss_pred             hHHHHHHHH----hcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeeeecc
Q 031196           86 FYEKIKRNR----SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQL  161 (164)
Q Consensus        86 ~y~~I~~N~----~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~~~~  161 (164)
                      +++.|++++    +.+.|++++++.+.                 .+.|.+.++.+.|.+.       ...+..++|+.+|
T Consensus       143 ~~~~l~~~l~~~~~~~~~~vl~~~~~~-----------------~~p~~l~~~~~~L~~~-------~~~~~~v~v~~~l  198 (250)
T PRK05991        143 PWELIEKRLRLAAEAGFVIALYNPISR-----------------ARPWQLGEAFDLLREH-------LPATVPVIFGRAA  198 (250)
T ss_pred             CHHHHHHHHHhhcCCCeEEEEECCccc-----------------cchhhHHHHHHHHHhc-------CCCCCEEEEEEeC
Confidence            455555554    44767777766652                 2457888888887652       1123345666666


Q ss_pred             cc
Q 031196          162 QT  163 (164)
Q Consensus       162 ~~  163 (164)
                      +.
T Consensus       199 g~  200 (250)
T PRK05991        199 GR  200 (250)
T ss_pred             CC
Confidence            53

>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed

Probab=99.62  E-value=9.2e-15  Score=121.98  Aligned_cols=97  Identities=16%  Similarity=0.215  Sum_probs=74.5

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      ++.++.|.+.++ +++||||+.|||++|+|+.+++.+.+ .+++++|||||||++|+ |++|+++..-++++++.--.  
T Consensus        85 ~~~~~~i~~~~~~G~~Vv~L~~GDP~iyst~~~l~~~l~-~~i~~evIPGISS~~aaaA~~gipL~~~~~~~~i~~~~--  161 (241)
T PRK05990         85 DTSAEAVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLA-PRYETEVIPGVCSMLGCWSVLGAPLVYRNQSLSVLSGV--  161 (241)
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCcHHHhHHHHHHHHHh-cCCCEEEECcHHHHHHHHHHhCCCeEcCCeEEEEEcCC--
Confidence            344566777776 58999999999999999999988774 48999999999999998 99999999888988883211  


Q ss_pred             cccCchHHHHHHHHhcCCccEEEEecc
Q 031196           81 WRPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        81 ~~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                       .|   -+.+...+... .+.|+|...
T Consensus       162 -~~---~~~l~~~l~~~-~~~vv~k~~  183 (241)
T PRK05990        162 -LP---EEELRRRLADA-DAAVIMKLG  183 (241)
T ss_pred             -CC---hHHHHHHHhCC-CCEEEEEeC
Confidence             12   23444444443 577888664

>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated

Probab=99.62  E-value=1.2e-14  Score=119.48  Aligned_cols=95  Identities=27%  Similarity=0.322  Sum_probs=75.7

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.|.+.+. +++||+|+.|||++|++|.+++.++++.|+++++||||||++|+ |++|+++...++.++|.-...  
T Consensus        78 ~~~~~i~~~~~~g~~V~~l~~GDP~~y~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~iis~~~--  155 (229)
T PRK05576         78 ENAEEIAAEAEEGKNVAFITLGDPNLYSTFSHLLEYLKCHDIEVETVPGISSFTAIASRAGVPLAMGDESLAIIPATR--  155 (229)
T ss_pred             HHHHHHHHHHHcCCcEEEEeCcCccccccHHHHHHHHHhCCCCEEEeCChhHHHHHHHHcCCCcccCCceEEEEECCC--
Confidence            34445666555 57999999999999999999999998889999999999999998 999999998888666632111  


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                           .+.+..-++.+ .|+|||..
T Consensus       156 -----~~~l~~~l~~~-~~~vl~~~  174 (229)
T PRK05576        156 -----EALIEQALTDF-DSVVLMKV  174 (229)
T ss_pred             -----HHHHHHHhhcC-CEEEEEec
Confidence                 34455556555 89999964

>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase

Probab=99.61  E-value=2.1e-14  Score=117.69  Aligned_cols=94  Identities=27%  Similarity=0.359  Sum_probs=74.0

Q ss_pred             HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCccc
Q 031196            6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRP   83 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P   83 (164)
                      .+.|.+.++ +++||+|+.|||++|+++.+++.++.+.|+++++|||+||++|+ |++|+++.+.+..+++.-...   +
T Consensus        80 ~~~i~~~~~~g~~Vv~l~~GDP~~y~~~~~l~~~~~~~~~~veviPGiSs~~~a~a~~g~~l~~~~~~~~~~~~~~---~  156 (230)
T TIGR01467        80 AEAVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQGMGIEVEVVPGITSFAACASAAGLPLVEGDESLAILPATA---G  156 (230)
T ss_pred             HHHHHHHHHCCCcEEEEeCCCCCcccCHHHHHHHHHHCCCcEEEeCChhHHHHHHHHhCCCcccCCceEEEEeCCC---C
Confidence            344666665 58999999999999999999999999889999999999999998 999999999888777632111   1


Q ss_pred             CchHHHHHHHHhcCCccEEEEec
Q 031196           84 GSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        84 ~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                         -+.+.+.++.+ .|+++|.-
T Consensus       157 ---~~~~~~~~~~~-~~vvil~~  175 (230)
T TIGR01467       157 ---EAELEKALAEF-DTVVLMKV  175 (230)
T ss_pred             ---HHHHHHHhccC-CeEEEEec
Confidence               13345555555 78888854

This model represents precorrin-2 C20-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis.

>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated

Probab=99.59  E-value=2.2e-14  Score=115.02  Aligned_cols=93  Identities=19%  Similarity=0.231  Sum_probs=67.2

Q ss_pred             HHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCc
Q 031196            7 DKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGS   85 (164)
Q Consensus         7 ~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s   85 (164)
                      +.+...+++++|||++.|||++|+.+. ++.+....++++++|||+||++|+ |++|++++.+   ..+++..   ++..
T Consensus        59 ~~i~~~~~g~~V~~l~~GDP~~~~~~~-~~~~~~~~~~~veviPGiSs~~aaaa~~g~~l~~~---~~is~~~---~~~~  131 (210)
T PRK05787         59 EWLELAAKGKNVVVLSTGDPLFSGLGK-LLKVRRAVAEDVEVIPGISSVQYAAARLGIDMNDV---VFTTSHG---RGPN  131 (210)
T ss_pred             HHHHHhhCCCcEEEEecCCccccccHH-HHHHHhccCCCeEEEcCHHHHHHHHHHhCCCHHHc---EEEeecC---CCcc
Confidence            334344567999999999999999654 444455456999999999999998 9999999963   3455432   2323


Q ss_pred             hHHHHHHHHhcCCccEEEEecc
Q 031196           86 FYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        86 ~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      + +.++..++.+-++++|.|.+
T Consensus       132 ~-~~l~~~~~~~~~~v~l~~~~  152 (210)
T PRK05787        132 F-EELEDLLKNGRKVIMLPDPR  152 (210)
T ss_pred             h-HHHHHHHHcCCeEEEEcCCC
Confidence            3 56777777777777776554

>PRK05948 precorrin-2 methyltransferase; Provisional

Probab=99.59  E-value=7.9e-15  Score=123.06  Aligned_cols=98  Identities=17%  Similarity=0.208  Sum_probs=77.6

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHh--CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~--~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      +.++.+++.+. +++||||+.|||++|+|..++...+++  .|+++++||||||++|+ |++|.++...+++++|     
T Consensus        80 ~~~~~i~~~~~~g~~v~~l~~GDp~~ys~~~~l~~~l~~~~~~~~veivPGIss~~a~aa~~g~pL~~~~e~l~i-----  154 (238)
T PRK05948         80 AAADQVWHYLEQGEDVAFACEGDVSFYSTFTYLAQTLQELYPQVAIQTIPGVCSPLAAAAALGIPLTLGSQRLAI-----  154 (238)
T ss_pred             HHHHHHHHHHHcCCeEEEEeCCChHHHHHHHHHHHHHHhcCCCCCEEEECChhHHHHHHHHhCCCeecCCCeEEE-----
Confidence            34566676665 589999999999999999999998877  49999999999999998 9999999999999988     


Q ss_pred             CcccCc-hHHHHHHHHhcCCccEEEEecccC
Q 031196           80 TWRPGS-FYEKIKRNRSLGLHTLCLLDIRVK  109 (164)
Q Consensus        80 ~~~P~s-~y~~I~~N~~~glHTlvLLDi~~~  109 (164)
                        .|.+ ..+.+++-++. -.|+|+|+....
T Consensus       155 --i~~~~~~~~l~~~l~~-~~~vVlmk~~~~  182 (238)
T PRK05948        155 --LPALYHLEELEQALTW-ADVVVLMKVSSV  182 (238)
T ss_pred             --EcCCCCHHHHHHHHhC-CCEEEEEECCcc
Confidence              2322 22344433333 379999998743

>TIGR02434 CobF precorrin-6A synthase (deacetylating)

Probab=99.52  E-value=4e-14  Score=119.71  Aligned_cols=95  Identities=22%  Similarity=0.259  Sum_probs=73.7

Q ss_pred             hHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHh---CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            5 KADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         5 ~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~---~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      .++.|.+.++ +++||||+.|||++|+|+.+++.+.++   .|+++++||||||++|+ |++|+++...++.+.+..   
T Consensus        91 ~a~~i~~~~~~g~~Vv~L~~GDP~~yst~~~l~~~l~~~~~~~~~vevVPGISS~~aaaA~lg~pl~~~~~~l~v~~---  167 (249)
T TIGR02434        91 WAQAIAEELGDDGTGAFLVWGDPSLYDSTLRILERLRALGGVPFDYEVIPGITSVQALTARHRIPLNRIGEPVQITT---  167 (249)
T ss_pred             HHHHHHHHHhCCCcEEEEeCCCchHhhhHHHHHHHHHHhcCCCCCEEEECCHHHHHHHHHHhCCCcccCCceEEEEe---
Confidence            3455667565 589999999999999999999998876   57999999999999998 999999999999888742   


Q ss_pred             CcccCchHHHHHHHHhcCCccEEEEecccC
Q 031196           80 TWRPGSFYEKIKRNRSLGLHTLCLLDIRVK  109 (164)
Q Consensus        80 ~~~P~s~y~~I~~N~~~glHTlvLLDi~~~  109 (164)
                          ....+.  ..+..+ .++++|.....
T Consensus       168 ----g~~l~~--~~l~~~-~~~vilk~~~~  190 (249)
T TIGR02434       168 ----GRRLAE--GGFPEG-DTVVVMLDGEQ  190 (249)
T ss_pred             ----ccchhh--ccccCC-CeEEEEECCcc
Confidence                111111  123433 67888886543

This model identifies CobF in High GC gram positive, alphaproteobacteria and pseudomonas-related species.

>PRK08284 precorrin 6A synthase; Provisional

Probab=99.51  E-value=8.5e-14  Score=117.94  Aligned_cols=92  Identities=21%  Similarity=0.285  Sum_probs=72.6

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHh---CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~---~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +.|.+.+. +++|+||+.|||++|+|+.+++.+.++   +|+++++||||||++|+ |++|+++..+++++.|.      
T Consensus        94 ~~i~~~l~~g~~Vv~l~~GDP~~ys~~~~l~~~l~~~~~~~i~vevVPGISS~~aaaA~lg~pl~~~~~~l~ii------  167 (253)
T PRK08284         94 RLIAEELPDGGTGAFLVWGDPSLYDSTLRILERVRARGRVAFDYEVIPGITSVQALAARHRIPLNRIGEPVHIT------  167 (253)
T ss_pred             HHHHHHHhCCCcEEEEeCCCcchhhHHHHHHHHHHhhccCCCcEEEECChhHHHHHHHHcCCChhcCCceEEEE------
Confidence            44666666 589999999999999999999998876   49999999999999998 99999999999999884      


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEeccc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRV  108 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~  108 (164)
                       |...   +...+...-.|+|+|....
T Consensus       168 -~g~~---l~~~l~~~~~~vvv~k~~~  190 (253)
T PRK08284        168 -TGRR---LAEGWPAGVDNVVVMLDGE  190 (253)
T ss_pred             -ecCc---hHHHHHhcCCcEEEEECCc
Confidence             2221   1222222336888888754

>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional

Probab=99.48  E-value=7.5e-13  Score=111.05  Aligned_cols=100  Identities=14%  Similarity=0.073  Sum_probs=71.1

Q ss_pred             HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceec--CceEEEecCCCCc
Q 031196            6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRF--GETVSIPFFTETW   81 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~f--g~~vtIpf~~~~~   81 (164)
                      .+.|.+.++ +++||+|+.|||++|++..+++.++.+.|+++++||||||++++ |++|+++-..  .+.+.+.-.. +.
T Consensus        70 ~~~i~~~~~~g~~Vv~L~sGDP~~yg~~~~l~~~l~~~~i~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~v~s~h-G~  148 (257)
T PRK15473         70 IDLMEAGVKAGKTVVRLQTGDVSLYGSIREQGEELTKRGIDFQVVPGVSSFLGAAAELGVEYTVPEVSQSLIITRME-GR  148 (257)
T ss_pred             HHHHHHHHHCCCeEEEEeCcCchhhhhHHHHHHHHHHCCCCEEEeCChhHHHHHHHHcCCCcccccccccEEEEeec-CC
Confidence            344445444 58999999999999999999999999999999999999999998 9999998732  3455543222 22


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      .|....+.+.. +...-.|+|++...
T Consensus       149 ~~~~~~~~l~~-~~~~~~t~vi~~~~  173 (257)
T PRK15473        149 TPVPAREQLES-FASHQTSMAIFLSV  173 (257)
T ss_pred             CCCCchhhHHH-HhcCCCeEEEECCc
Confidence            23222233433 33332699999744

>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional

Probab=99.46  E-value=4.6e-13  Score=115.46  Aligned_cols=107  Identities=22%  Similarity=0.296  Sum_probs=79.8

Q ss_pred             hchHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            3 EEKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      ++.++.|++.++ +++|||++ .|||++|+|+.+|+.++++.|++|++|||+|+++|+ +.+|++..+    +.    -.
T Consensus        71 ~~~~~~i~~~l~~G~~ValvSdaGdP~I~dpg~~Lv~~~~~~gi~v~vIPGiSA~~aA~a~sG~~~~~----f~----f~  142 (287)
T PRK14994         71 QQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDR----FC----YE  142 (287)
T ss_pred             HHHHHHHHHHHHCCCeEEEEccCCCCceeCCHHHHHHHHHHCCCCEEEeCCHHHHHHHHHHcCCCCCc----ce----Ee
Confidence            355677888777 58999998 999999999999999999999999999999999998 999999433    21    12


Q ss_pred             CcccCch---HHHHHHHHhcCCccEEEEec-ccCCchhhhhhc
Q 031196           80 TWRPGSF---YEKIKRNRSLGLHTLCLLDI-RVKEPSLESLCR  118 (164)
Q Consensus        80 ~~~P~s~---y~~I~~N~~~glHTlvLLDi-~~~e~~~e~~~~  118 (164)
                      ++.|...   -+.+++-+.. -.|+|+++. ..-.+.++.+.+
T Consensus       143 Gflp~~~~~r~~~L~~l~~~-~~t~V~yesp~R~~~~l~~l~~  184 (287)
T PRK14994        143 GFLPAKSKGRRDALKALEAE-PRTLIFYESTHRLLDSLEDIVA  184 (287)
T ss_pred             EECCCCCchHHHHHHHHhcC-CCeEEEEEEChhHHHHHHHHHH
Confidence            3345322   3344444433 389999996 655555666543

>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase

Probab=99.44  E-value=3.4e-12  Score=104.99  Aligned_cols=127  Identities=18%  Similarity=0.181  Sum_probs=81.9

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCC--CcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~g--i~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      +.+++.+. +++|++|+.|||++|++..++....++.+  +++++|||+||++|+ |++|+++..-..  .+++... ..
T Consensus        60 ~~~~~~~~~g~~Vv~l~~GDP~~~~~~~~l~~~l~~~~~~~~v~viPGiSS~~aa~a~~g~p~~~~~~--~is~~~~-~~  136 (239)
T TIGR01466        60 ELAIELAAEGRTVALVSSGDPGIYGMAALVFEALEKKGAEVDIEVIPGITAASAAASLLGAPLGHDFC--VISLSDL-LT  136 (239)
T ss_pred             HHHHHHHhCCCCEEEEecCCCcccccHHHHHHHHHhcCCCCCEEEeCCccHHHHHHHHcCCCcccccE--EEECCCC-CC
Confidence            34555444 58999999999999999888888877765  699999999999998 999999954323  3443211 12


Q ss_pred             cCchHHHHHHHH----hcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeee
Q 031196           83 PGSFYEKIKRNR----SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL  158 (164)
Q Consensus        83 P~s~y~~I~~N~----~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~  158 (164)
                      |   ++.+.+++    +.+ -+++|++-..+                .|.+++++.++.|.+.       ...+...+|+
T Consensus       137 ~---~~~~~~~l~~~~~~~-~~~vl~~~~~~----------------~~~~~~~~i~~~L~~~-------~~~~~~v~v~  189 (239)
T TIGR01466       137 P---WPEIEKRLRAAAEAD-FVIAIYNPRSK----------------RRPEQFRRAMEILLEH-------RKPDTPVGIV  189 (239)
T ss_pred             C---chHHHHHHHHHhCCC-cEEEEECCccc----------------chhhhHHHHHHHHHhc-------CCCCCEEEEE
Confidence            2   33333333    334 34666654322                2457778877777641       1112335577


Q ss_pred             ecccc
Q 031196          159 KQLQT  163 (164)
Q Consensus       159 ~~~~~  163 (164)
                      .+++.
T Consensus       190 ~~l~~  194 (239)
T TIGR01466       190 RNAGR  194 (239)
T ss_pred             EECCC
Confidence            77664

This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis.

>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit

Probab=99.38  E-value=6.9e-12  Score=101.24  Aligned_cols=62  Identities=23%  Similarity=0.243  Sum_probs=51.4

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcce
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLY   66 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly   66 (164)
                      |+..+.|.+.+.+++|++|+.|||++|++..++..++.+  .++++|||+||++|+ |++|+++-
T Consensus        54 ~~~~~~i~~~~~g~~vv~l~~GDP~~~~~~~~l~~~~~~--~~v~iiPGiSs~~~a~a~~g~~l~  116 (204)
T TIGR02467        54 DELLEFIAATRKEKRVVVLASGDPLFYGIGRTLAERLGK--ERLEIIPGISSVQYAFARLGLPWQ  116 (204)
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCCcccccHHHHHHhCCC--CcEEEeCChHHHHHHHHHcCCChh
Confidence            344555666655789999999999999998887766654  589999999999998 99999995

This model recognizes the CbiE methylase which is responsible, in part (along with CbiT), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiT subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK05765 precorrin-3B C17-methyltransferase; Provisional

Probab=99.27  E-value=7.2e-11  Score=98.76  Aligned_cols=94  Identities=14%  Similarity=0.112  Sum_probs=66.5

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCC--cEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGI--QVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi--~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      +.+++.++ +++|++|+.|||++|++...++..+++.|+  ++++|||+||++|+ |++|+++-..-..++.   .+...
T Consensus        63 ~~~i~~~~~g~~Vv~l~~GDP~i~~~~~~~~~~l~~~~~~~~veviPGiSs~~aa~a~~g~pl~~~~~~~s~---~~~~~  139 (246)
T PRK05765         63 NTAIEKALEGNIVALVSSGDPQVYGMAGLVFELISRRKLDVDVEVIPGVTAALAAAARLGSPLSLDFVVISL---SDLLI  139 (246)
T ss_pred             HHHHHHHHCCCcEEEEeCCCchhhhhHHHHHHHHHhcCCCCCEEEeCCHHHHHHHHHHhCCCCcCCcEEEEc---CCCCC
Confidence            34666665 689999999999999998999998888876  79999999999998 9999998532233333   22233


Q ss_pred             cCchHHHHHHH---HhcCCccEEEEec
Q 031196           83 PGSFYEKIKRN---RSLGLHTLCLLDI  106 (164)
Q Consensus        83 P~s~y~~I~~N---~~~glHTlvLLDi  106 (164)
                      |.   +.+..+   +...-.|+++.+-
T Consensus       140 p~---~~~~~~l~~~~~~~~~ivly~~  163 (246)
T PRK05765        140 PR---EEILHRVTKAAEADFVIVFYNP  163 (246)
T ss_pred             Ch---HHHHHHHHHHhcCCeEEEEEcc
Confidence            42   122222   2344477777664

>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed

Probab=99.23  E-value=1.1e-10  Score=106.66  Aligned_cols=98  Identities=14%  Similarity=0.022  Sum_probs=71.8

Q ss_pred             HHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCc
Q 031196            8 KILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGS   85 (164)
Q Consensus         8 ~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s   85 (164)
                      .+++.++ +++|++|..|||++|.+..+++..+.+.|+++++||||||++|+ +++|+|+..-|.+-++.+-+.+-++..
T Consensus        72 ~l~~~a~~Gk~VvrL~~GDP~vfg~~~ee~~~l~~~gi~~eVVPGISS~~aaaA~aGiPlt~r~~~~s~~viT~h~~~~~  151 (474)
T PRK07168         72 HLLQFAKEGKIVVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSSIAASSYAGIPLTHRNYSNSVTLLTGHAKGPL  151 (474)
T ss_pred             HHHHHHhCCCEEEEEeCCCchHHhhHHHHHHHHHhCCCCEEEECChhHHHHHHHHcCCCCCCccccceEEEEccCcCCcc
Confidence            3556655 58899999999999999999999999999999999999999998 999999988777555555443322210


Q ss_pred             hHHHH-HHHHhcCCccEEEEecc
Q 031196           86 FYEKI-KRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        86 ~y~~I-~~N~~~glHTlvLLDi~  107 (164)
                       .+.. ...+..+ .|||+|--.
T Consensus       152 -~~~~~~~~l~~~-~tlV~lm~~  172 (474)
T PRK07168        152 -TDHGKYNSSHNS-DTIAYYMGI  172 (474)
T ss_pred             -ccchhHHHhcCC-CeEEEEcCh
Confidence             0111 1123332 588888543

>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional

Probab=99.14  E-value=8.2e-10  Score=92.60  Aligned_cols=61  Identities=18%  Similarity=0.166  Sum_probs=50.6

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCC--CcEEEEcCccHHHHH-HhhCCccee
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYR   67 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~g--i~vevIpGiSs~~A~-s~~GL~ly~   67 (164)
                      +.+++.++ +++|++|..|||++|.....+.....+.|  +++++|||+||++|+ |++|+++..
T Consensus        61 ~~~i~~~~~g~~Vv~L~sGDP~~~g~~~~~~~~l~~~~~~~~veviPGiSs~~aaaa~~g~plt~  125 (241)
T PRK15478         61 QAAIELAQAGHNVALISSGDAGIYGMAGLVLELVSKQKLDVEVRLIPGMTASIAAASLLGAPLMH  125 (241)
T ss_pred             HHHHHHHHCCCeEEEEECCCCCcchhHHHHHHHHHhcCCCCcEEEeCCHHHHHHHHHHhCCCccc
Confidence            34566665 58999999999999998777777766554  679999999999998 999999943

>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]

Probab=98.83  E-value=8.4e-08  Score=80.09  Aligned_cols=88  Identities=24%  Similarity=0.307  Sum_probs=58.8

Q ss_pred             HHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccC
Q 031196            6 ADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG   84 (164)
Q Consensus         6 ~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~   84 (164)
                      .+.|.++-++++|++|..|||++|--  ....+.+-.--++++|||+||++++ |++|.++.... .+|.     +-+| 
T Consensus        59 l~~i~~~~~g~~v~VLasGDP~f~G~--g~~l~~~~~~~~v~iIPgiSS~q~a~ARlg~~~~~~~-~isl-----Hgr~-  129 (210)
T COG2241          59 LEEILAERKGRDVVVLASGDPLFSGV--GRLLRRKFSCEEVEIIPGISSVQLAAARLGWPLQDTE-VISL-----HGRP-  129 (210)
T ss_pred             HHHHHHHhCCCCeEEEecCCcchhhh--HHHHHHhcCccceEEecChhHHHHHHHHhCCChHHeE-EEEe-----cCCC-
Confidence            45577666689999999999999972  2222222212689999999999988 99999998553 3333     1233 


Q ss_pred             chHHHHHHHHhcCCccEEEEe
Q 031196           85 SFYEKIKRNRSLGLHTLCLLD  105 (164)
Q Consensus        85 s~y~~I~~N~~~glHTlvLLD  105 (164)
                        .+.++.-+..| |.++++-
T Consensus       130 --~~~l~~~~~~~-~~~vil~  147 (210)
T COG2241         130 --VELLRPLLENG-RRLVILT  147 (210)
T ss_pred             --HHHHHHHHhCC-ceEEEeC
Confidence              45554434444 6666654

>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]

Probab=98.82  E-value=6.3e-08  Score=82.56  Aligned_cols=105  Identities=22%  Similarity=0.241  Sum_probs=76.8

Q ss_pred             hhchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecC--ceEEEecC
Q 031196            2 VEEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFG--ETVSIPFF   77 (164)
Q Consensus         2 vE~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg--~~vtIpf~   77 (164)
                      +|+..+.+.+..+ +|+||=|-.|||.+|.....-+.+..+.||++++|||+|+|.|+ +.+|..+..=|  +++.+.-+
T Consensus        61 LeeIi~~m~~a~~~Gk~VvRLhSGDpsiYgA~~EQm~~L~~~gI~yevvPGVss~~AAAA~L~~ELT~P~vsQtvilTR~  140 (254)
T COG2875          61 LEEIIDLMVDAVREGKDVVRLHSGDPSIYGALAEQMRELEALGIPYEVVPGVSSFAAAAAALGIELTVPGVSQTVILTRP  140 (254)
T ss_pred             HHHHHHHHHHHHHcCCeEEEeecCChhHHHHHHHHHHHHHHcCCCeEEeCCchHHHHHHHHhCceeecCCcceeEEEEcc
Confidence            3555555555555 59999999999999999999999999999999999999999997 88998877655  44444443


Q ss_pred             CCCcccCchHHHHHHHHhcCCccEEEEecc
Q 031196           78 TETWRPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        78 ~~~~~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      ... .|...-+.+.+=.+.|.-..++|-+.
T Consensus       141 sgr-t~vpe~e~l~~la~~~aTm~I~L~v~  169 (254)
T COG2875         141 SGR-TPVPEKESLAALAKHGATMVIFLGVH  169 (254)
T ss_pred             ccC-CCCCchhHHHHHHhcCceeEeeehhh
Confidence            332 34445777777667773333344443

>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]

Probab=98.80  E-value=5.9e-08  Score=82.67  Aligned_cols=114  Identities=21%  Similarity=0.205  Sum_probs=80.0

Q ss_pred             hHHHHHhhccc-CCeEEEecCCCCccccHHHHHHHHHhC---CCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            5 KADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKL---GIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         5 ~~~~I~~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~---gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      .+++-++.|++ ++||++..|||-+|.=-.-.+..+.+.   +++|+||||+|..+|+ |++|=||-.-==++|+   ++
T Consensus        61 Ra~~AielA~~G~~ValVSsGDpgVYgMA~lv~E~~~~~~~~~v~veVvPGvTA~~aaAa~lGAPL~hDF~~ISL---SD  137 (249)
T COG1010          61 RAKEAIELAAEGRDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVPGVTAALAAAARLGAPLGHDFCVISL---SD  137 (249)
T ss_pred             HHHHHHHHHhcCCeEEEEeCCCccHHHhHHHHHHHHHhcCCCCccEEEeCChHHHHHHHHHhCCCcccceEEEEh---Hh
Confidence            34556777885 899999999999996433333434444   4999999999999998 9999999765556666   77


Q ss_pred             CcccCchHHHHHHHH----hcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHH
Q 031196           80 TWRPGSFYEKIKRNR----SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEV  141 (164)
Q Consensus        80 ~~~P~s~y~~I~~N~----~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~  141 (164)
                      .+.|   ++.|++-+    +.+ -.++|-....+.                |-=...+|+++|++.
T Consensus       138 lLtP---we~IekRl~aAA~ad-fVi~~YNP~s~~----------------R~~~~~~a~eil~~~  183 (249)
T COG1010         138 LLTP---WEVIEKRLRAAAEAD-FVIALYNPISKR----------------RPEQLGRAFEILREH  183 (249)
T ss_pred             cCCc---HHHHHHHHHHHhhCC-EEEEEECCcccc----------------chHHHHHHHHHHHHh
Confidence            8888   77776643    334 234444444332                223567899999884

>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism]

Probab=98.70  E-value=1.8e-07  Score=79.72  Aligned_cols=94  Identities=21%  Similarity=0.218  Sum_probs=73.1

Q ss_pred             HHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCc
Q 031196            8 KILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGS   85 (164)
Q Consensus         8 ~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s   85 (164)
                      -+.+.|+ ++.|+=|-.|||+++-==..-...+.+.||++|||||+||..|+ +..|+|+..=|-+-++.|-+.+-.+..
T Consensus        73 ~lv~~a~~G~~VVRLKgGDP~iFGRggEE~~~l~~~gI~~eVVPGiTSa~a~~a~agIPlT~R~~a~s~~~vTgh~~~~~  152 (244)
T COG0007          73 LLVELAREGKRVVRLKGGDPYIFGRGGEEIEALAEAGIEFEVVPGITSAIAAPAYAGIPLTHRGVASSFTFVTGHDRDGK  152 (244)
T ss_pred             HHHHHHhcCCeEEEecCCCCCeecCcHHHHHHHHHcCCceEEeCccchHHHHHHHcCCceeecCccceEEEEeCcCCCCC
Confidence            3556676 48999999999999965566777788999999999999999999 999999998887777777776655544


Q ss_pred             hHHHHHHHHhcCCccEEEE
Q 031196           86 FYEKIKRNRSLGLHTLCLL  104 (164)
Q Consensus        86 ~y~~I~~N~~~glHTlvLL  104 (164)
                         .-.+++...--|||++
T Consensus       153 ---~~w~~la~~~~TlVi~  168 (244)
T COG0007         153 ---LDWEALARSVGTLVIL  168 (244)
T ss_pred             ---cChHHhcccCCCEEEE
Confidence               1124455556788764

>COG0313 Predicted methyltransferases [General function prediction only]

Probab=97.79  E-value=5.1e-05  Score=65.88  Aligned_cols=65  Identities=28%  Similarity=0.413  Sum_probs=55.4

Q ss_pred             chHHHHHhhccc-CCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceec
Q 031196            4 EKADKILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRF   68 (164)
Q Consensus         4 ~~~~~I~~~a~~-~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~f   68 (164)
                      +....|++..++ ++||++. .|-|.++.-=..|+.+|++.||+|++|||+|++..+ +.+|++-.+|
T Consensus        65 ~~~~~li~~l~~g~~valVSDAG~P~ISDPG~~LV~~a~~~gi~V~~lPG~sA~~tAL~~SGl~~~~F  132 (275)
T COG0313          65 EKLPKLIPLLKKGKSVALVSDAGTPLISDPGYELVRAAREAGIRVVPLPGPSALITALSASGLPSQRF  132 (275)
T ss_pred             HHHHHHHHHHhcCCeEEEEecCCCCcccCccHHHHHHHHHcCCcEEecCCccHHHHHHHHcCCCCCCe
Confidence            344567777775 5999994 699999988899999999999999999999999776 9999987755

>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family

Probab=97.67  E-value=0.00021  Score=61.83  Aligned_cols=126  Identities=19%  Similarity=0.192  Sum_probs=84.2

Q ss_pred             HHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            6 ADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      ...+++..+ +++||+++ .|-|.++.==..|+..|++.|+.|.++||+|+++++ +.+|++-.+        |+-.+|.
T Consensus        62 ~~~l~~~l~~g~~valvSDAG~P~ISDPG~~LV~~~~~~~i~v~~ipG~sA~~~Al~~SG~~~~~--------f~F~GFl  133 (276)
T TIGR00096        62 QNLLAAKLEIGNNIAVSSDAGPPLISDPGHLLVACREKANIIVVPLPGAAALTAALCASGPATDR--------FFFGGFL  133 (276)
T ss_pred             HHHHHHHHHcCCcEEEEecCCCCCcCCccHHHHHHHHHCCCeEEcCChHHHHHHHHHhcCCCCCc--------eEEeeeC
Confidence            345666555 58899995 599999988899999999999999999999999988 999986542        3334555


Q ss_pred             cCch--HHHHHHHHhcCCccEEEEecccCCch-hhhhhc--C-C---------ccCCCCCCCCHHHHHHHHH
Q 031196           83 PGSF--YEKIKRNRSLGLHTLCLLDIRVKEPS-LESLCR--G-K---------KLYEPPRYMTVNIAIEQLL  139 (164)
Q Consensus        83 P~s~--y~~I~~N~~~glHTlvLLDi~~~e~~-~e~~~~--g-~---------~~~~~~r~Mt~~~A~~~Ll  139 (164)
                      |...  -..+.+.+...-+|+++..---.-.+ ++.|..  | +         |.||-=.+-++.+.++.+-
T Consensus       134 p~k~~~r~~~l~~l~~~~~t~ifyEsp~Rl~~~L~~l~~~~g~r~i~~arELTK~~E~~~~g~~~e~~~~~~  205 (276)
T TIGR00096       134 PKKSKRRQALKAYIAEERTTVFFYESHHRLLTTLTDLNVFLGSERFVGAAELTKKESEYWFGTVGQLLPDIT  205 (276)
T ss_pred             CCChHHHHHHHHHHhCCCCeEEEEECcHhHHHHHHHHHHhcCCceEEEEEecCCCceEEEeCCHHHHHHHHH
Confidence            6533  33444555556688888776533222 222211  1 1         2333334567777777763

No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.

>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]

Probab=97.11  E-value=0.0012  Score=59.88  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=55.5

Q ss_pred             HHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhC-CCcEEEEcCccHHHHH-HhhCCcceecCce
Q 031196            6 ADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKL-GIQVKAVHNASVMNAV-GICGLQLYRFGET   71 (164)
Q Consensus         6 ~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~-gi~vevIpGiSs~~A~-s~~GL~ly~fg~~   71 (164)
                      +..+++.|+++|++..+||-|++|-+-..|+.+|.++ +|+|++++|.|=+-|. ..+.++-.++=+.
T Consensus        73 ~~~LveaAkekdIvYAVPGHP~VAEktVqlL~e~~ek~ni~Vkilgg~SFiD~~fealkiDPveG~q~  140 (488)
T COG3956          73 AADLVEAAKEKDIVYAVPGHPLVAEKTVQLLIEACEKENIKVKILGGQSFIDALFEALKIDPVEGFQI  140 (488)
T ss_pred             HHHHHHhhcccceEEecCCCchhHHHHHHHHHHHHhccCceEEEeCcchhHHHHHHHhcCCcccCceE
Confidence            4557788999999999999999997778888887766 7999999999999997 8888776654433

>KOG1527 consensus Uroporphyrin III methyltransferase [Coenzyme transport and metabolism]

Probab=95.04  E-value=0.041  Score=50.32  Aligned_cols=69  Identities=17%  Similarity=0.168  Sum_probs=54.3

Q ss_pred             hhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196           11 SESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus        11 ~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      +.+. +-.|+=|--|||+++----.-..-.++.|+...|||||||-.++ ...|+|+..=|=.-.+-|-+.
T Consensus       328 ~~l~~G~~VVRLKqGDPyifGRGGEE~~Ff~qhGy~p~ViPGIssal~~~~~agIP~ThRgvAdqvl~cTG  398 (506)
T KOG1527|consen  328 NFLEAGATVVRLKQGDPYIFGRGGEEMDFFQQHGYRPQVIPGISSALGIAAEAGIPLTHRGVADQVLFCTG  398 (506)
T ss_pred             HHHhCCCEEEEecCCCceeecCCchhhhhHHhCCceeEeccchhhhhhhhHhcCCCcccccccceEEEEec
Confidence            3344 46788899999999965555556678999999999999999988 899999998776655555443

>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional

Probab=87.42  E-value=4  Score=37.16  Aligned_cols=122  Identities=19%  Similarity=0.208  Sum_probs=81.6

Q ss_pred             chHHHHHhhcccCCeEEEecCCCCcc-ccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCC
Q 031196            4 EKADKILSESQESNVAFLVVGDPFGA-TTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         4 ~~~~~I~~~a~~~~VafLt~GDP~~a-TTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      +..|..++.|...+|.+.|-||=|-- .|+.+ +..|+..|-+|++|-  |.+-|+  ++-+       ..-.|.|+--+
T Consensus        70 ~~ID~ai~La~~~~vi~~TfGDmlRVPGs~~S-L~~ara~GadVriVY--SpldAl~iA~~n-------P~k~vVF~avG  139 (364)
T PRK15062         70 GRIDAAIELASRPGVILCTFGDMLRVPGSKGS-LLEAKAEGADVRIVY--SPLDALKIAREN-------PDKEVVFFAIG  139 (364)
T ss_pred             HHHHHHHHHhCCCCeEEEeccccccCCCCcCC-HHHHHhCCCCEEEEe--CHHHHHHHHHHC-------CCCeEEEEecC
Confidence            45678889999999999999997754 44444 456888999999995  445554  4433       34466777766


Q ss_pred             cccCch--HHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccee
Q 031196           81 WRPGSF--YEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKI  156 (164)
Q Consensus        81 ~~P~s~--y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~  156 (164)
                      |--+.|  --.|++-.+.+++.+.+|--.                     -+..-|++.||+-.+.+=.|.+.+.-.+
T Consensus       140 FETTaP~~A~~i~~A~~~~~~Nfsvl~~h---------------------kl~PPa~~~ll~~~~~~idgfi~PGHVs  196 (364)
T PRK15062        140 FETTAPATAATLLQAKAEGLKNFSVLSSH---------------------KLVPPAMRALLEDPELRIDGFIAPGHVS  196 (364)
T ss_pred             chhccHHHHHHHHHHHHcCCCCEEEEEec---------------------cccHHHHHHHHcCCCCCccEEEecCEeE
Confidence            654444  345666667788888887664                     2445688888865444444555554443

>PF01924 HypD: Hydrogenase formation hypA family; InterPro: IPR002780 HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli

Probab=86.87  E-value=0.99  Score=40.84  Aligned_cols=110  Identities=19%  Similarity=0.261  Sum_probs=67.8

Q ss_pred             chHHHHHhhcccCCeEEEecCCCCcc-ccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCC
Q 031196            4 EKADKILSESQESNVAFLVVGDPFGA-TTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         4 ~~~~~I~~~a~~~~VafLt~GDP~~a-TTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      ...|..++.|+..||.+.|-||-|-- .++.. +.+||..|-+|++|-  |.+-|+  |+-+       ..-.+.|+--+
T Consensus        65 ~~ID~ai~LA~~~~vil~TfGDm~RVPGs~~S-L~~ara~GadVriVy--Sp~dAl~iA~~n-------P~k~vVF~avG  134 (355)
T PF01924_consen   65 GDIDAAIELAKRPGVILATFGDMMRVPGSRGS-LAEARAEGADVRIVY--SPLDALKIAKEN-------PDKEVVFFAVG  134 (355)
T ss_dssp             HHHHHHHHHHTT--EEEEE-TTGGG---TT---HHHHHHTT-EEEE-S--SHHHHHHHHHH--------TTSEEEEEEEE
T ss_pred             HHHHHHHHHhCCCCeEEEeCcccccCCCCCCC-HHHHHhCCCCEEEEe--CHHHHHHHHHhC-------CCCceEEEEeC
Confidence            45678889999999999999998765 44444 566888899999995  445565  5443       23356666655


Q ss_pred             cccCc--hHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHH
Q 031196           81 WRPGS--FYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL  144 (164)
Q Consensus        81 ~~P~s--~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~  144 (164)
                      |--+.  .--.|.+..+.|++.+.+|-..                     .+...|++.||+-.+.
T Consensus       135 FETTaP~~A~~i~~a~~~~~~Nfsvl~~h---------------------k~~ppal~~ll~~~~~  179 (355)
T PF01924_consen  135 FETTAPATAAAILQAKEEGIKNFSVLSSH---------------------KLTPPALEALLEDPEL  179 (355)
T ss_dssp             -HHHHHHHHHHHHHHHHHT-SSEEEEEEE---------------------E-CHHHHHHHHHTT--
T ss_pred             cccCcHHHHHHHHHHHHcCCCCEEEEEec---------------------cccHHHHHHHHcCCCC
Confidence            54332  3557778888888988888765                     4556788888885433

HypD is one of the genes needed for formation of these enzymes []. This protein has been found in Gram-negative and Gram-positive bacteria and Archaea. HypD contains many possible metal binding residues, which may bind to nickel. Transposon insertions into HypD resulted in Rhizobium leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas [].; GO: 0046872 metal ion binding; PDB: 2Z1D_A.

>TIGR00075 hypD hydrogenase expression/formation protein HypD

Probab=86.79  E-value=3.9  Score=37.26  Aligned_cols=122  Identities=19%  Similarity=0.213  Sum_probs=80.9

Q ss_pred             chHHHHHhhcccCCeEEEecCCCCcc-ccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCC
Q 031196            4 EKADKILSESQESNVAFLVVGDPFGA-TTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         4 ~~~~~I~~~a~~~~VafLt~GDP~~a-TTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      +..|..++.|...+|-+.|-||=|-- .|.. =+.+|+..|-+|++|-  |.+-|+  ++-+       ..-.|.|+--+
T Consensus        76 ~~ID~ai~LA~~~~vii~TfGDmlRVPGs~~-SL~~ara~GadVriVY--SpldAl~iA~~n-------Pdk~VVF~avG  145 (369)
T TIGR00075        76 ERIDEAIELATIPEIIFCTFGDMMRVPGSGG-SLLQARAEGADVRIVY--SPMDALKIAKEN-------PDRKVVFFAIG  145 (369)
T ss_pred             HHHHHHHHHhCCCCeEEEecchhccCCCCCC-CHHHHHhCCCCEEEEe--CHHHHHHHHHHC-------CCCeEEEEecC
Confidence            45678888998899999999997654 3333 3667899999999995  455554  4332       34456677766


Q ss_pred             cccCch--HHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccee
Q 031196           81 WRPGSF--YEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKI  156 (164)
Q Consensus        81 ~~P~s~--y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~  156 (164)
                      |--+.|  --.|++-.+.|+..+.+|--.                     -+..-|++.||+-++.+=.|.+.+.-++
T Consensus       146 FETTaP~~A~~i~~a~~~~~~Nfsvl~~h---------------------kl~PPa~~~ll~~~~~~idgfi~PGHVs  202 (369)
T TIGR00075       146 FETTAPTTASTLLSAKAEDINNFFFLSAH---------------------RLVPPAVEALLENPAVQIDAFLAPGHVS  202 (369)
T ss_pred             chhccHHHHHHHHHHHHcCCCcEEEEEec---------------------cccHHHHHHHHcCCCCCccEEEecCEEE
Confidence            654433  446667777788888887654                     3456688888865433334555554443

HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	164
3i4t_A	292	Crystal Structure Of Putative Diphthine Synthase Fr		1e-46
2egl_A	265	Crystal Structure Of Glu171 To Lys Mutant Of Diphth		5e-23
2dsi_A	265	Crystal Structure Of Glu171 To Arg Mutant Of Diphth		1e-22
2egb_A	265	Crystal Structure Of Glu140 To Asn Mutant Of Diphth		1e-22
2pb5_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-22
2p5f_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-22
2ed3_A	265	Mutant I127m Structure Of Ph0725 From Pyrococcus Ho		1e-22
2ek2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-22
2eni_A	265	Mutant F197m Structure Of Ph0725 From Pyrococcus Ho		1e-22
2ehc_A	265	Crystal Structure Of Asn69 To Lys Mutant Of Diphthi		2e-22
2e08_A	265	Crystal Structure Of Glu140 To Lys Mutant Of Diphth		2e-22
2dxv_A	265	Crystal Structure Of Glu54 To His Mutant Of Diphthi		2e-22
2owg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2en5_A	265	Mutant R262h Structure Of Ph0725 From Pyrococcus Ho		2e-22
2e4r_A	265	Mutant I253m Structure Of Ph0725 From Pyrococcus Ho		2e-22
2e17_A	265	Crystal Structure Of Arg173 To Ala Mutant Of Diphth		2e-22
2dxw_A	265	Crystal Structure Of Glu54 To Lys Mutant Of Diphthi		2e-22
1wng_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2hux_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2pcm_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2pcg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2p9d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2emr_A	265	Mutant L65m Structure Of Ph0725 From Pyrococcus Hor		2e-22
2el3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2el2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2el1_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2el0_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2eka_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2ek4_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2ek3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2ejk_A	265	Mutant L38m Structure Of Ph0725 From Pyrococcus Hor		2e-22
2eh5_A	265	Mutant L184m Structure Of Ph0725 From Pyrococcus Ho		2e-22
2egs_A	265	Crystal Structure Of Leu261 To Met Mutant Of Diphth		2e-22
2dsh_A	265	Crystal Structure Of Lys26 To Tyr Mutant Of Diphthi		2e-22
2z6r_A	265	Crystal Structure Of Lys49 To Arg Mutant Of Diphthi		2e-22
2e7r_A	265	Crystal Structure Of Glu54 To Arg Mutant Of Diphthi		2e-22
2e15_A	265	Crystal Structure Of Arg173 To Asn Mutant Of Diphth		2e-22
2dv7_A	265	Crystal Structure Of Lys187 To Arg Mutant Of Diphth		2e-22
2dsg_A	265	Crystal Structure Of Lys26 To Arg Mutant Of Diphthi		2e-22
2pck_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2e8h_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2eeq_A	265	Mutant Y29m Structure Of Ph0725 From Pyrococcus Hor		2e-22
2ejz_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2eh2_A	265	Mutant V18m Structure Of Ph0725 From Pyrococcus Hor		2e-22
2e4n_A	265	Mutant V251m Structure Of Ph0725 From Pyrococcus Ho		2e-22
2hr8_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2emu_A	265	Mutant L21h Structure Of Ph0725 From Pyrococcus Hor		2e-22
2p6i_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2p6d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2dv3_A	265	Crystal Structure Of Leu65 To Arg Mutant Of Diphthi		2e-22
2dv4_A	265	Crystal Structure Of Leu65 To Gln Mutant Of Diphthi		2e-22
2dv5_A	265	Crystal Structure Of Leu65 To Ala Mutant Of Diphthi		2e-22
2e8r_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2e8q_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-22
2p5c_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2e16_A	265	Crystal Structure Of Glu140 To Arg Mutant Of Diphth		2e-22
1vce_A	265	Crystal Structure Of Project Id Ph0725 From Pyrococ		2e-22
2pch_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2owu_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2ele_A	265	Mutant V18c Structure Of Ph0725 From Pyrococcus Hor		2e-22
2pb6_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-22
2ehl_A	265	Crystal Structure Of Thr146 To Arg Mutant Of Diphth		2e-22
2eh4_A	265	Mutant T146m Structure Of Ph0725 From Pyrococcus Ho		2e-22
2dxx_A	265	Crystal Structure Of Asn142 To Glu Mutant Of Diphth		2e-22
2pca_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-22
2p6k_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-22
2eld_A	265	Mutant L160m Structure Of Ph0725 From Pyrococcus Ho		3e-22
2ek7_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		3e-22
2hut_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-22
2huq_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-22
2e07_A	265	Crystal Structure Of Asp79 To Glu Mutant Of Diphthi		3e-22
2pb4_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-22
2e8s_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-22
2owv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-22
2ejj_A	265	Mutant K129m Structure Of Ph0725 From Pyrococcus Ho		4e-22
2huv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		7e-22
2ed5_A	265	Mutant S147m Structure Of Ph0725 From Pyrococcus Ho		7e-22
2p2x_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-21
2owf_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		4e-21
1vhv_A	268	Crystal Structure Of Diphthine Synthase Length = 26		4e-13
1wde_A	294	Crystal Structure Of The Conserved Hypothetical Pro		1e-12

>pdb|3I4T|A Chain A, Crystal Structure Of Putative Diphthine Synthase From Entamoeba Histolytica Length = 292

Iteration: 1
 Score =  181 bits (460), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 108/135 (80%)
Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           +VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MNA+G 
Sbjct: 81  LVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGC 140
Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
            GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+ +G+
Sbjct: 141 SGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGR 200
Query: 121 KLYEPPRYMTVNIAI 135
            ++EPPRYMT+N  I
Sbjct: 201 DIFEPPRYMTINQCI 215

>pdb|2EGL|A Chain A, Crystal Structure Of Glu171 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ K+
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAKK 172

>pdb|2DSI|A Chain A, Crystal Structure Of Glu171 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKARK 172

>pdb|2EGB|A Chain A, Crystal Structure Of Glu140 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPNGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB5|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPMAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P5F|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 70/102 (68%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G+++++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSMTVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ED3|A Chain A, Mutant I127m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHMYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (E140m) Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPMGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ENI|A Chain A, Mutant F197m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EHC|A Chain A, Crystal Structure Of Asn69 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E08|A Chain A, Crystal Structure Of Glu140 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPKGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXV|A Chain A, Crystal Structure Of Glu54 To His Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EN5|A Chain A, Mutant R262h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E4R|A Chain A, Mutant I253m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E17|A Chain A, Crystal Structure Of Arg173 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXW|A Chain A, Crystal Structure Of Glu54 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1WNG|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUX|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCM|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P9D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EMR|A Chain A, Mutant L65m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L242m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (l185m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL1|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L44m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL0|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L21m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EKA|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L202m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK4|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L8m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L3m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJK|A Chain A, Mutant L38m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EH5|A Chain A, Mutant L184m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EGS|A Chain A, Crystal Structure Of Leu261 To Met Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DSH|A Chain A, Crystal Structure Of Lys26 To Tyr Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2Z6R|A Chain A, Crystal Structure Of Lys49 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E7R|A Chain A, Crystal Structure Of Glu54 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E15|A Chain A, Crystal Structure Of Arg173 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV7|A Chain A, Crystal Structure Of Lys187 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DSG|A Chain A, Crystal Structure Of Lys26 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCK|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8H|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLMFLDIKAEK 172

>pdb|2EEQ|A Chain A, Mutant Y29m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJZ|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (y11m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EH2|A Chain A, Mutant V18m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E4N|A Chain A, Mutant V251m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HR8|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EMU|A Chain A, Mutant L21h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6I|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV3|A Chain A, Crystal Structure Of Leu65 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV4|A Chain A, Crystal Structure Of Leu65 To Gln Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV5|A Chain A, Crystal Structure Of Leu65 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8R|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8Q|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (K19m) Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P5C|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPMVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E16|A Chain A, Crystal Structure Of Glu140 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPRGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1VCE|A Chain A, Crystal Structure Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCH|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWU|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLMIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ELE|A Chain A, Mutant V18c Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB6|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EHL|A Chain A, Crystal Structure Of Thr146 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPRSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EH4|A Chain A, Mutant T146m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPMSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXX|A Chain A, Crystal Structure Of Asn142 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGEWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCA|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAF+  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFMTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6K|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVMYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ELD|A Chain A, Mutant L160m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   G+HTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGMHTLLFLDIKAEK 172

>pdb|2EK7|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L163m) Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHT+  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTMLFLDIKAEK 172

>pdb|2HUT|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           ++  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VMPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUQ|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI G+ +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGMHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E07|A Chain A, Crystal Structure Of Asp79 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E+ VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENEVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB4|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G + ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GMSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8S|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++  + +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSAMVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSMYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJJ|A Chain A, Mutant K129m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYMF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score = 99.8 bits (247), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +R K+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRMKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ED5|A Chain A, Mutant S147m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score = 99.8 bits (247), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P  +Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTMYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P2X|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL + +F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIMKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWF|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%)
Query: 9   ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRF 68
           +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI GL +Y+F
Sbjct: 71  VLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKF 130
Query: 69  GETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 110
           G++ ++ +      P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 131 GKSATVAYPEGNMFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase Length = 268

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GI 60
           +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  AV G+
Sbjct: 74  LEENSFRLIERAKSKSVVLLVPGDPXVATTHSAIKLEAERKGVKTRIIHGASISTAVCGL 133
Query: 61  CGLQLYRFGETVSIPFFTETW-RPGSFYEKIKRNRSLGLHTLCLLDI 106
            GL  YRFG++ ++     +W R  +    IK NRS+  HTL  LD+
Sbjct: 134 TGLHNYRFGKSATV-----SWHRSQTPVNVIKANRSIDAHTLLFLDL 175

>pdb|1WDE|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Ape0931 From Aeropyrum Pernix K1 Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 2   VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VMNAVGI 60
           +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V  A G 
Sbjct: 70  LEERSREIVSRALDAVVAVVTAGDPXVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGA 129
Query: 61  CGLQLYRFGETVSIPFFTETWR---PGSFYEKIKRNRSLGLHTLCLLDI 106
             L  YRFG TV++P     WR   P S   +I  N   GLHT  LLD+
Sbjct: 130 TXLSFYRFGGTVTLPG---PWRGVTPISVARRIYLNLCAGLHTTALLDV 175
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	2e-48
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	8e-40
1wde_A	294	Probable diphthine synthase; structural genomics,	2e-39
1vhv_A	268	Diphthine synthase; structural genomics, transfera	2e-33
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-04

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292

 Score =  157 bits (397), Expect = 2e-48
 Identities = 89/158 (56%), Positives = 119/158 (75%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGI 60
           +VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MNA+G 
Sbjct: 81  LVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGC 140

Query: 61  CGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGK 120
            GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+ +G+
Sbjct: 141 SGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGR 200

Query: 121 KLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 158
            ++EPPRYMT+N  IEQLLEVE  Q       +  ++ 
Sbjct: 201 DIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVG 238

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265

 Score =  134 bits (338), Expect = 8e-40
 Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 15/156 (9%)

Query: 3   EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICG 62
               + +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI G
Sbjct: 65  LNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITG 124

Query: 63  LQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKL 122
           L +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+               
Sbjct: 125 LHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKA-------------- 170

Query: 123 YEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 158
            E   YMT N A+E LL+VE ++       +  +++
Sbjct: 171 -EKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVV 205

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294

 Score =  134 bits (337), Expect = 2e-39
 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VMNAVG 59
            +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V  A G
Sbjct: 69  DLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARG 128

Query: 60  ICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
              L  YRFG TV++P       P S   +I  N   GLHT  LLD+  +          
Sbjct: 129 ATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALLDVDER---------- 178

Query: 120 KKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHE 153
                    ++    +  LLE +        A  
Sbjct: 179 ------GVQLSPGQGVSLLLEADREYAREAGAPA 206

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268

 Score =  118 bits (296), Expect = 2e-33
 Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 23/143 (16%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-G 59
            +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  AV G
Sbjct: 73  DLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCG 132

Query: 60  ICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
           + GL  YRFG++ ++ +     R  +    IK NRS+  HTL  LD+             
Sbjct: 133 LTGLHNYRFGKSATVSW----HRSQTPVNVIKANRSIDAHTLLFLDLH------------ 176

Query: 120 KKLYEPPRYMTVNIAIEQLLEVE 142
                 P  MT+  A+E L+  +
Sbjct: 177 ------PEPMTIGHAVENLIAED 193

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 3e-04
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 11/33 (33%)

Query: 108 VKEPSLE-SLCRGKKLYEP---PRYMTVNIAIE 136
           +K+  L+ SL    KLY     P  + +   +E
Sbjct: 22  LKK--LQASL----KLYADDSAPA-LAIKATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	100.0
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	99.95
1wde_A	294	Probable diphthine synthase; structural genomics,	99.95
1vhv_A	268	Diphthine synthase; structural genomics, transfera	99.91
2e0n_A	259	Precorrin-2 C20-methyltransferase; cobalt-factor I	99.74
2qbu_A	232	Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me	99.73
2ybo_A	294	Methyltransferase; SUMT, NIRE, heme D1 biosynthesi	99.71
1ve2_A	235	Uroporphyrin-III C-methyltransferase; heme, biosyn	99.69
1s4d_A	280	Uroporphyrin-III C-methyltransferase; tetrapyrrole	99.68
1cbf_A	285	Cobalt-precorrin-4 transmethylase; precorrin-4 met	99.67
1va0_A	239	Uroporphyrin-III C-methyltransferase; structural g	99.66
1wyz_A	242	Putative S-adenosylmethionine-dependent methyltra;	99.61
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	99.6
4e16_A	253	Precorrin-4 C(11)-methyltransferase; structural ge	99.59
3ndc_A	264	Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH	99.55
2npn_A	251	Putative cobalamin synthesis related protein; COBF	99.54
2zvb_A	295	Precorrin-3 C17-methyltransferase; plasmid, struct	99.5
3nut_A	251	Precorrin-3 methylase; vitamin B12 pathway, cobala	99.42
3kwp_A	296	Predicted methyltransferase; putative methyltransf	99.41
2bb3_A	221	Cobalamin biosynthesis precorrin-6Y methylase (CB;	99.34
3nd1_A	275	Precorrin-6A synthase/COBF protein; methyltransfer	99.33
3hh1_A	117	Tetrapyrrole methylase family protein; chlorobium	98.93
3ffy_A	115	Putative tetrapyrrole (corrin/porphyrin) methylas;	90.44

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}

Probab=100.00  E-value=2.2e-36  Score=257.86  Aligned_cols=159  Identities=55%  Similarity=0.884  Sum_probs=133.2

Q ss_pred             chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCccc
Q 031196            4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRP   83 (164)
Q Consensus         4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~~P   83 (164)
                      +.++.|++.+++++||+|+.|||++|+++.+++.++++.|+++++|||+|+++|++++|+|+++||.+.+++|++.+|+|
T Consensus        84 ~~~~~i~~~a~~~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p  163 (292)
T 3i4t_A           84 TEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRP  163 (292)
T ss_dssp             -CCCTTHHHHTTSEEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCC
T ss_pred             HHHHHHHHHhcCCCEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCC
Confidence            34455777887899999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eeeeccc
Q 031196           84 GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IILKQLQ  162 (164)
Q Consensus        84 ~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~~~~~  162 (164)
                      .++++.+.+|+..+.|||||+|++++|++++|||||+++|+|||||++++++++|++++++...+.+++++. +|+.+++
T Consensus       164 ~~~~~~~~~~l~~~~~Tlvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t  243 (292)
T 3i4t_A          164 SSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVA  243 (292)
T ss_dssp             CTHHHHHHHHHHTTCBEEEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTT
T ss_pred             CccHHHHHHHhhcCCCeEEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence            999999999999999999999999999999999999999999999999999999999998877777887665 5555554

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...

Probab=99.95  E-value=1.8e-27  Score=196.66  Aligned_cols=146  Identities=38%  Similarity=0.667  Sum_probs=130.0

Q ss_pred             hchHHHHH-hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~-~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+..+.|+ +.+++++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+|++|++++.||++++++|++.+|
T Consensus        64 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aaa~~g~pl~~~~~~~~v~~~s~~~  143 (265)
T 2z6r_A           64 ELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNW  143 (265)
T ss_dssp             HHHHHHHTHHHHTTSCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTB
T ss_pred             HHHHHHHHHHHhCCCcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHHHHhCCCccCCCccEEEEEecCCc
Confidence            34456677 77778999999999999999999999999999999999999999987799999999999999999999999


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-eeeeec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHEL-KIILKQ  160 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~-~~v~~~  160 (164)
                      +|.++++.+..+++.+.||+||||+++++               ||||+..++.++|.++.++.+.+.+++++ .+|+.+
T Consensus       144 ~~~~~~~~l~~~~~~~~~tlvl~d~~~~~---------------~~y~~~~~~~~~l~~~~~~l~~~~~~~~~~v~v~~~  208 (265)
T 2z6r_A          144 FPTSYYDVIKENAERGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLAR  208 (265)
T ss_dssp             CCCHHHHHHHHHHHTTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEES
T ss_pred             CCCchHHHHHHHHhCCCceEEEEeccccc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCEEEEEEe
Confidence            99988999999999999999999999876               89999999999999988887766676554 566667


Q ss_pred             ccc
Q 031196          161 LQT  163 (164)
Q Consensus       161 ~~~  163 (164)
                      ++.
T Consensus       209 l~~  211 (265)
T 2z6r_A          209 AGS  211 (265)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            664

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1

Probab=99.95  E-value=2e-27  Score=200.32  Aligned_cols=145  Identities=30%  Similarity=0.381  Sum_probs=127.3

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+..+.|++.+++++||+|+.|||++|+||.+++.++++.|+++++|||+||++|+ |++|+|+++||++++|+|++++|
T Consensus        71 e~~~~~i~~~~~g~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~v~~~~~~~  150 (294)
T 1wde_A           71 EERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGV  150 (294)
T ss_dssp             HTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCC
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHhCCCccCCCceEEEEeccCcc
Confidence            45567788888888999999999999999999999999999999999999999998 99999999999999999999999


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHH----hCC-CCCCCcc-e
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL----QGE-SGKAHEL-K  155 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~----~~~-~~~~~~~-~  155 (164)
                      .|.++++.+..|+..+.||+||++...+                +|||++++++++|+++++.    +++ |.+++++ .
T Consensus       151 ~p~~~~~~l~~~l~~~~~tlvl~~~~~~----------------~~~m~~~~i~~~L~~l~~~l~~~~~~~G~~~~~~~v  214 (294)
T 1wde_A          151 TPISVARRIYLNLCAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSV  214 (294)
T ss_dssp             CCHHHHHHHHHHHHHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEE
T ss_pred             cCCChHHHHHHHHhcCCCeEEEEecccc----------------cccccHHHHHHHHHHHHHhhhccccccCcCCCCCEE
Confidence            9999999999999999999999998743                6999999999999988775    444 5555444 5


Q ss_pred             eeeecccc
Q 031196          156 IILKQLQT  163 (164)
Q Consensus       156 ~v~~~~~~  163 (164)
                      +|+.+++.
T Consensus       215 ~v~~~lg~  222 (294)
T 1wde_A          215 LVEAGAGG  222 (294)
T ss_dssp             EEECCGGG
T ss_pred             EEEEeCCC
Confidence            66667654

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=99.91  E-value=1.5e-23  Score=174.09  Aligned_cols=134  Identities=31%  Similarity=0.539  Sum_probs=115.9

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+.++.|++.+++++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ |++|+|++.|+..++++|    |
T Consensus        75 ~~~~~~i~~~a~~~~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiSs~~aa~a~~G~pl~~~~~~~sv~~----~  150 (268)
T 1vhv_A           75 EENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----H  150 (268)
T ss_dssp             TTTHHHHHHHHTTSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----S
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCccHHHHHHHHcCCCcccCcceEEEEe----c
Confidence            45567888888889999999999999999999999999999999999999999998 999999999999999988    5


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeeeecc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQL  161 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~~~~  161 (164)
                      .|.++++.+.+|+..+.||+|++|.+.                  .||++..++++|+++.+..+     +...+|+.++
T Consensus       151 ~~~~~~~~~~~~l~~~~~tlvl~d~~~------------------~~~~~~~~~~~L~~l~~~~~-----~~~v~v~~~l  207 (268)
T 1vhv_A          151 RSQTPVNVIKANRSIDAHTLLFLDLHP------------------EPMTIGHAVENLIAEDAQMK-----DLYAVGIARA  207 (268)
T ss_dssp             CCSHHHHHHHHHHHTTCBEEEEECCSS------------------SCCCHHHHHHHHHHHCGGGG-----GSEEEEEEST
T ss_pred             CCCchHHHHHHHhccCCCeEEEEcCch------------------hhcCHHHHHHHHHHHHhcCC-----CcEEEEEEcC
Confidence            788889999999998889999999963                  38999999999998755322     3345666666


Q ss_pred             cc
Q 031196          162 QT  163 (164)
Q Consensus       162 ~~  163 (164)
                      +.
T Consensus       208 ~~  209 (268)
T 1vhv_A          208 GS  209 (268)
T ss_dssp             TS
T ss_pred             CC
Confidence            53

>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*

Probab=99.74  E-value=2.2e-17  Score=135.79  Aligned_cols=98  Identities=17%  Similarity=0.200  Sum_probs=82.3

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      |+..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|+.+++.  +..
T Consensus        83 ~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~--~~~  160 (259)
T 2e0n_A           83 AANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVL--AQI  160 (259)
T ss_dssp             GGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEE--CSC
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEE--cCC
Confidence            556678888887 58999999999999999999999999999999999999999998 99999999999988863  211


Q ss_pred             cccCchHHHHHHHHhcCCccEEEEecc
Q 031196           81 WRPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        81 ~~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      .    ..+.++..++.+ +|+||++..
T Consensus       161 ~----~~~~l~~~~~~~-~t~vl~~~~  182 (259)
T 2e0n_A          161 D----EIGELERALVTH-STVVVMKLS  182 (259)
T ss_dssp             S----STHHHHHHHTTC-SEEEECCTT
T ss_pred             C----CHHHHHHHhhcC-CEEEEEccc
Confidence            1    246677777655 899998764

>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=99.73  E-value=3.3e-17  Score=131.56  Aligned_cols=95  Identities=20%  Similarity=0.254  Sum_probs=78.6

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++++|..+++.      
T Consensus        82 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~------  155 (232)
T 2qbu_A           82 SAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVV------  155 (232)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCCBCTTCCEEEE------
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHHhCCCCCCCCceEEEE------
Confidence            44556777776 58999999999999999999999999999999999999999998 99999999999888873      


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                       |.+.- .+...++.+ +|+||++..
T Consensus       156 -~~~~~-~l~~~~~~~-~t~vl~~~~  178 (232)
T 2qbu_A          156 -PRVDD-RFERVLRDV-DACVIMKTS  178 (232)
T ss_dssp             -SSCCH-HHHHHGGGC-SEEEESSHH
T ss_pred             -eCCHH-HHHHHhhcC-CeEEEEccc
Confidence             22211 566666665 899998654

>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*

Probab=99.71  E-value=3.5e-17  Score=138.12  Aligned_cols=104  Identities=17%  Similarity=0.155  Sum_probs=80.4

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.|++.++ +++|++|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|.+-++.|.+...
T Consensus        90 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt~~~~~~~~~~~sg~~  169 (294)
T 2ybo_A           90 EINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHL  169 (294)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSCBTTTBSCEEEEECSC
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcccCCCCcEEEEEcccC
Confidence            33455777776 58999999999999999999999999999999999999999998 99999999999755554444444


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      .+.+..+...+++..+-+|+||++-.
T Consensus       170 ~~~~~~~~~~~~l~~~~~tlVl~~~~  195 (294)
T 2ybo_A          170 QNDGRLDLDWAGLARGKQTLVFYMGL  195 (294)
T ss_dssp             CTTSSCCCCHHHHTSSSCEEEEESCG
T ss_pred             CcccchhhHHHHHhcCCCeEEEECcH
Confidence            44321122234455666999998764

>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1

Probab=99.69  E-value=3.9e-17  Score=132.34  Aligned_cols=94  Identities=21%  Similarity=0.187  Sum_probs=75.3

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|.+-++.|.+...
T Consensus        66 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~~s~~~  145 (235)
T 1ve2_A           66 AITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD  145 (235)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC
T ss_pred             HHHHHHHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCCcccCCcccEEEEeCCCC
Confidence            33455777776 58999999999999999999999999999999999999999998 99999999998543333333333


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                       |.+       ++. +-||+|+++-
T Consensus       146 -~~~-------~l~-~~~t~vl~~~  161 (235)
T 1ve2_A          146 -PAL-------PLP-RADTLVLLMP  161 (235)
T ss_dssp             -TTS-------CCC-BCSEEEEEC-
T ss_pred             -chh-------hhc-cCCeEEEEcC
Confidence             532       556 5699999874

>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1

Probab=99.68  E-value=1.6e-16  Score=132.96  Aligned_cols=100  Identities=13%  Similarity=0.140  Sum_probs=77.1

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.|++.++ +++||+|+.|||++|+++.+++..+++.|+++++|||+||++|+ +++|++++..|..-++.|.+.+.
T Consensus        80 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~  159 (280)
T 1s4d_A           80 DISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD  159 (280)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC
T ss_pred             HHHHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcC
Confidence            34455777776 58999999999999999999999999999999999999999998 99999999888743443333333


Q ss_pred             ccC-----chHHHHHHHHhcCCccEEEEecc
Q 031196           82 RPG-----SFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        82 ~P~-----s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      .+.     ..++.+    ..+-+|+||++..
T Consensus       160 ~~~~~~~~~~~~~l----~~~~~tlVl~~~~  186 (280)
T 1s4d_A          160 SSGLVPDRINWQGI----ASGSPVIVMYMAM  186 (280)
T ss_dssp             -------CCCHHHH----HTTCSEEEEESCS
T ss_pred             CcccccccccHHHH----hCCCCeEEEECch
Confidence            332     133433    4456999999875

>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*

Probab=99.67  E-value=3.7e-16  Score=130.66  Aligned_cols=102  Identities=19%  Similarity=0.174  Sum_probs=79.1

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecC--C
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFF--T   78 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~--~   78 (164)
                      |+..+.|++.++ +++||+|+.|||++|+++.+++.++.+.|+++++|||+||++|+ +++|++++.+|.+-++.|.  .
T Consensus        80 ~~~~~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~pl~~~~~~~~~~~~~~~  159 (285)
T 1cbf_A           80 EEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAE  159 (285)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECC
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHHHcCCCcccCCcceeEEEeccC
Confidence            445667888776 58999999999999999999999999999999999999999998 9999999999865444432  2


Q ss_pred             CCcccCchHHHHHHHHhcCCccEEEEec
Q 031196           79 ETWRPGSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        79 ~~~~P~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                      .. .|....+.+ .++..+-+|+|+++-
T Consensus       160 g~-~~~~~~~~l-~~l~~~~~tlvl~~~  185 (285)
T 1cbf_A          160 GR-TPVPEFEKL-TDLAKHKCTIALFLS  185 (285)
T ss_dssp             SS-SCCCGGGCH-HHHHTTCSEEEEESC
T ss_pred             CC-CCcchHHHH-HHHhcCCCeEEEECc
Confidence            21 232233334 345556699999864

>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A

Probab=99.66  E-value=2.1e-16  Score=128.34  Aligned_cols=95  Identities=22%  Similarity=0.127  Sum_probs=74.1

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCc--eEEE-ecCCC
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGE--TVSI-PFFTE   79 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~--~vtI-pf~~~   79 (164)
                      +..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+   |++++.+|.  .+++ ++.. 
T Consensus        63 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa---g~pl~~~~~~~~~~~~~~~~-  138 (239)
T 1va0_A           63 EIHRLLLRHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS---GLPLTHRGLAHGFAAVSGVL-  138 (239)
T ss_dssp             HHHHHHHHHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT---CCCSSBTTTBSEEEEEESSC-
T ss_pred             HHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc---CCCcccCCccceEEEEeccC-
Confidence            44456777776 58999999999999999999999999999999999999999988   999999984  5554 3322 


Q ss_pred             CcccCchHHHHHHHHhcCCccEEEEecc
Q 031196           80 TWRPGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        80 ~~~P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                        ++..  ....+++..+ ||+||++-.
T Consensus       139 --~~~~--~~~~~~l~~~-~t~vl~~~~  161 (239)
T 1va0_A          139 --EGGG--YPDLRPFARV-PTLVVLMGV  161 (239)
T ss_dssp             --GGGC--CCCCTTTTTC-SSEEEESCS
T ss_pred             --Cccc--hhhHHHhcCC-CcEEEEccH
Confidence              2221  1233556777 999998743

>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1

Probab=99.61  E-value=3.7e-15  Score=122.12  Aligned_cols=96  Identities=17%  Similarity=0.165  Sum_probs=64.9

Q ss_pred             hchHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            3 EEKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      ++.++.|++.++ +++||+|+ .|||++|+++.+++.++++.|++|++|||+||++|+ |++|++.+.|    ++.    
T Consensus        70 ~~~~~~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiSs~~aa~a~~G~p~~~f----~~~----  141 (242)
T 1wyz_A           70 PEDISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSF----AFH----  141 (242)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSE----EEE----
T ss_pred             HHHHHHHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHHHHHHHHHHcCCCCCeE----EEE----
Confidence            345677888887 58999997 899999999999999999999999999999999998 9999995544    331    


Q ss_pred             CcccCch---HHHHHHHHhc---CCccEEEEec
Q 031196           80 TWRPGSF---YEKIKRNRSL---GLHTLCLLDI  106 (164)
Q Consensus        80 ~~~P~s~---y~~I~~N~~~---glHTlvLLDi  106 (164)
                      ++.|...   .+.++.-.+.   +-+|+||++.
T Consensus       142 g~~p~~~~~~~~~l~~l~~~~~~~~~t~vl~~~  174 (242)
T 1wyz_A          142 GYLPIEPGERAKKLKTLEQRVYAESQTQLFIET  174 (242)
T ss_dssp             EECCSSTTHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EEcCCCccchHHHHHHHhcccccCCCeEEEEEc
Confidence            2233322   1233332222   1499999864

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=99.60  E-value=1.5e-15  Score=134.83  Aligned_cols=101  Identities=22%  Similarity=0.171  Sum_probs=78.1

Q ss_pred             chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.+++.++ +++|++|+.|||++|+++.+++..+++.||++++|||+||++|+ +++|+|++.+|..-++.|.+.+.
T Consensus       281 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~v~vvPGiSs~~aa~a~~Giplt~~~~~~~~~~vsg~~  360 (457)
T 1pjq_A          281 EINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHL  360 (457)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--
T ss_pred             HHHHHHHHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHCCCCEEEeCCHhHHHHHHHHcCCCccCCCccceEEEEeCCC
Confidence            33456777776 58999999999999999999999999999999999999999998 99999999999866666655554


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                      ++.  .....+++..+-||+||++-
T Consensus       361 ~~~--~~~~~~~l~~~~~t~Vl~~~  383 (457)
T 1pjq_A          361 KTG--GELDWENLAAEKQTLVFYMG  383 (457)
T ss_dssp             ------CCCHHHHHSSSEEEEESSC
T ss_pred             CCc--chhhHHHHhcCCCeEEEEcc
Confidence            432  11123556666799998654

>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}

Probab=99.59  E-value=1.1e-14  Score=119.97  Aligned_cols=102  Identities=17%  Similarity=0.083  Sum_probs=72.7

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCc--eEEEecCC
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGE--TVSIPFFT   78 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~--~vtIpf~~   78 (164)
                      |+..+.|++.++ +++||+|+.|||++|++..+++.++++.|+++++|||+||++|+ +++|+++..-|.  .+.+.-..
T Consensus        64 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~~~~~~~~~  143 (253)
T 4e16_A           64 QEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRME  143 (253)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHHHHTCCSCBTTTBSCEEEEEC-
T ss_pred             HHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHhCCCcccCCccceEEEEecc
Confidence            344566777775 68999999999999999999999999999999999999999998 999999976543  34332111


Q ss_pred             CCcccCchHHHHHHHHhcCCccEEEEec
Q 031196           79 ETWRPGSFYEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        79 ~~~~P~s~y~~I~~N~~~glHTlvLLDi  106 (164)
                      . -.|....+.+. .+..+-+|+|+++-
T Consensus       144 g-~~~~~~~~~~~-~l~~~~~t~vl~~~  169 (253)
T 4e16_A          144 G-RTPVPEKESIQ-SYAKHQTSMVIFLS  169 (253)
T ss_dssp             ---CCCCGGGSHH-HHHTTCSEEEEEEC
T ss_pred             C-CCCcchHHHHH-HHhcCCCeEEEECc
Confidence            1 01111112232 34444589998874

>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A

Probab=99.55  E-value=3.7e-14  Score=117.99  Aligned_cols=72  Identities=21%  Similarity=0.177  Sum_probs=62.2

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEE
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI   74 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtI   74 (164)
                      |+.++.|++.++ +++||+|+.|||++|.+..+++.++.+.|+++++|||+||++|+ +++|+++...+..-++
T Consensus        63 ~~~~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA~lG~plt~~~~~~~~  136 (264)
T 3ndc_A           63 DAIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSV  136 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHTCCSCBTTTBCCE
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHHHhCCCccCCCceeEE
Confidence            345566777775 68999999999999999999999999999999999999999998 9999999876654343

>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}

Probab=99.54  E-value=4.3e-15  Score=121.73  Aligned_cols=88  Identities=20%  Similarity=0.345  Sum_probs=70.3

Q ss_pred             HHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCC---CcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            8 KILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLG---IQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         8 ~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~g---i~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      .|.+.++ +++||+|+.|||++|+++.+++.++++.|   +++++|||+||++|+ +++|+++..+++++++.       
T Consensus        94 ~i~~~~~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i~veviPGiSs~~aa~a~~g~pl~~~~~~~~~~-------  166 (251)
T 2npn_A           94 TIRERTPDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILINRIGEAIHIT-------  166 (251)
T ss_dssp             HHHHHSCTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHHTCCSSCTTCCCEEE-------
T ss_pred             HHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCCcEEEeCChhHHHHHHHHcCCCcCCCCCeEEEE-------
Confidence            4556665 68999999999999999999999999887   999999999999998 99999999998888774       


Q ss_pred             cCchHHHHHHHHhcCCccEEEEe
Q 031196           83 PGSFYEKIKRNRSLGLHTLCLLD  105 (164)
Q Consensus        83 P~s~y~~I~~N~~~glHTlvLLD  105 (164)
                      |...   ++.++....||+|+|.
T Consensus       167 ~g~~---l~~~l~~~~~t~vvl~  186 (251)
T 2npn_A          167 TGRN---LPETSAKDRRNCVVML  186 (251)
T ss_dssp             ETTT---GGGSCTTGGGEEEEES
T ss_pred             ccch---hhHHHHhcCCcEEEEE
Confidence            1111   2223433448998764

>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A*

Probab=99.50  E-value=8.4e-14  Score=118.20  Aligned_cols=113  Identities=21%  Similarity=0.191  Sum_probs=84.1

Q ss_pred             HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhC--------------------CCcEEEEcCccHHHHH-HhhCC
Q 031196            6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKL--------------------GIQVKAVHNASVMNAV-GICGL   63 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~--------------------gi~vevIpGiSs~~A~-s~~GL   63 (164)
                      ++.+++.++ +++||+|+.|||++|++...+...+++.                    |+++++|||+||++|+ +++|+
T Consensus        64 ~~~~l~~a~~G~~Va~L~~GDP~~yg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~gi~veVIPGiSS~~aaaA~lG~  143 (295)
T 2zvb_A           64 AEEALERALSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGS  143 (295)
T ss_dssp             HHHHHHHHHTTCEEEEEESBCTTSSSSHHHHHHHHHHTTCEECSCCCSSSEEEEETTEEEEEEEECCCCHHHHHHHTTEE
T ss_pred             HHHHHHHHHCCCcEEEEeCCCCChhhhHHHHHHHHHHhcccccccccccccccccccCCCcEEEECCHhHHHHHHHHhCC
Confidence            456777665 5899999999999999999888887765                    4999999999999998 99999


Q ss_pred             cceecCceEEEecCCCCcccCchHHHHHHHH---hcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHH
Q 031196           64 QLYRFGETVSIPFFTETWRPGSFYEKIKRNR---SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLE  140 (164)
Q Consensus        64 ~ly~fg~~vtIpf~~~~~~P~s~y~~I~~N~---~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle  140 (164)
                      ++..-  ...+++...    ..+++.+...+   ..+-+|+||++.+.+                +|.+.+.+++++|++
T Consensus       144 plt~~--~~~is~~~~----~~~~~~l~~~l~~~~~~~~t~vl~~~~~~----------------~r~~~~~~i~~~L~~  201 (295)
T 2zvb_A          144 PLAHD--TCLISLSDL----LTPWPLIERRLHAAGQGDFVVVLYNPQSK----------------RRDWQLRKSAEILLE  201 (295)
T ss_dssp             TTSSC--EEEEECCCT----TSCHHHHHHHHHHHHHTTCEEEEESCCCS----------------SCTTHHHHHHHHHTT
T ss_pred             CccCC--CeEEeCCCC----CCCHHHHHHHHHHhhcCCcEEEEEcCCcc----------------cchhhHHHHHHHHHh
Confidence            98532  234444221    12355555443   335589999887532                467889999998876

>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}

Probab=99.42  E-value=1e-12  Score=107.94  Aligned_cols=93  Identities=14%  Similarity=0.157  Sum_probs=69.7

Q ss_pred             HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHh----CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~----~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      +.+++.++ +++||+|+.|||++|++..+++..+.+    .|+++++|||+||++|+ +++|+++..-...++  |... 
T Consensus        69 ~~li~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~s--~~~~-  145 (251)
T 3nut_A           69 THALEMAAEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAIN--LSDN-  145 (251)
T ss_dssp             HHHHHHHHTTCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEEEEE--SCCT-
T ss_pred             HHHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeEEEE--ecCC-
Confidence            45777775 689999999999999999999999987    89999999999999998 999999954333333  3211 


Q ss_pred             cccCchHHHHHHHH---hcCCccEEEEe
Q 031196           81 WRPGSFYEKIKRNR---SLGLHTLCLLD  105 (164)
Q Consensus        81 ~~P~s~y~~I~~N~---~~glHTlvLLD  105 (164)
                         ..+.+.+++.+   ..+-.|++++.
T Consensus       146 ---~~~~~~~~~~l~~l~~~~~tlvl~~  170 (251)
T 3nut_A          146 ---LKPFEILEKRLRHAARGDFAMAFYN  170 (251)
T ss_dssp             ---TSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             ---CCChHHHHHHHHHHhCCCCEEEEEC
Confidence               12345554443   34436888765

>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}

Probab=99.41  E-value=8.3e-13  Score=112.33  Aligned_cols=96  Identities=15%  Similarity=0.079  Sum_probs=74.8

Q ss_pred             chHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            4 EKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         4 ~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      +.++.|++.++ +++||+++ .|||++|.+..+++..+++.|++|++|||+|+++++ +++|+++.+|    ++.    +
T Consensus        76 ~~~~~li~~l~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~~f----~f~----g  147 (296)
T 3kwp_A           76 ERIPQLIAKLKQGMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPF----YFY----G  147 (296)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCSSE----EEE----E
T ss_pred             hHhHHHHHHHhcCceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCCce----eEE----e
Confidence            44567888777 68999998 999999999999999999999999999999999988 9999998544    321    3


Q ss_pred             cccCchH--HHHHHHHhcCCccEEEEecc
Q 031196           81 WRPGSFY--EKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        81 ~~P~s~y--~~I~~N~~~glHTlvLLDi~  107 (164)
                      +.|....  ....+++...-+|+|++.-.
T Consensus       148 ~~p~~~~~r~~~l~~l~~~~~tlV~y~~~  176 (296)
T 3kwp_A          148 FLDRKPKDRKAEIAGLAQRPETLIFYEAP  176 (296)
T ss_dssp             ECCSSHHHHHHHHHTTTTCCSEEEEEECG
T ss_pred             eccCCcHHHHHHHHHhhcCCceeEeeeCc
Confidence            3454332  23345566666899997653

>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=99.34  E-value=1.4e-12  Score=105.69  Aligned_cols=95  Identities=17%  Similarity=0.217  Sum_probs=66.5

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      ++.+++|.+.+++++||+|+.|||++|+ +.+++.++ ..|+++++|||+||++|+ +++|+++..   ...+++.... 
T Consensus        76 ~~~~~~i~~~~~g~~Vv~L~~GDP~i~~-~~~~l~~~-~~~i~veviPGiSS~~aa~a~~g~pl~~---~~~vs~~~r~-  149 (221)
T 2bb3_A           76 GDEIRRIMEEGREREVAVISTGDPMVAG-LGRVLREI-AEDVEIKIEPAISSVQVALARLKVDLSE---VAVVDCHAKD-  149 (221)
T ss_dssp             HHHHHHHHHHHHHSCEEEEESBCTTTTT-SHHHHHTS-CCSSEEEEECCCCHHHHHHHHHTCCGGG---EEEEEC-----
T ss_pred             HHHHHHHHHhcCCCcEEEEeCCCCcccc-CHHHHHHh-cCCCCEEEECCHHHHHHHHHHhCCCcee---EEEEeecCCC-
Confidence            4456667654457999999999999975 77777666 459999999999999998 999999985   4555653221 


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEeccc
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRV  108 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~  108 (164)
                       +....+.+..    +-+++++++...
T Consensus       150 -~~~~l~~l~~----~~~~vvl~~~~~  171 (221)
T 2bb3_A          150 -FDAELTELLK----YRHLLILADSHF  171 (221)
T ss_dssp             -CCHHHHTHHH----HCEEEEEECTTC
T ss_pred             -chHHHHHHhc----CCeEEEEECCCC
Confidence             2222333332    227888887653

>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}

Probab=99.33  E-value=1.5e-12  Score=109.81  Aligned_cols=67  Identities=27%  Similarity=0.374  Sum_probs=60.1

Q ss_pred             HHHhhcc--cCCeEEEecCCCCccccHHHHHHHHHh-CCCcEEEEcCccHHHHH-HhhCCcceecCceEEE
Q 031196            8 KILSESQ--ESNVAFLVVGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI   74 (164)
Q Consensus         8 ~I~~~a~--~~~VafLt~GDP~~aTTH~~l~~ra~~-~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtI   74 (164)
                      .|++.++  +++||+|+.|||++|.+..+++.++.+ .|+++++|||+|+++|+ +++|+++..+++.+.+
T Consensus       115 ~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~veviPGiSs~~aa~a~~g~pl~~~~~~~~~  185 (275)
T 3nd1_A          115 EITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLTTKVIPGITAIQALCAAHAIPLNDIGAPVVI  185 (275)
T ss_dssp             HHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEEEEEECCCCHHHHHHHHHTCCSSCTTCCEEE
T ss_pred             HHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCCEEEecCccHHHHHHHHcCCCCccCCcEEEE
Confidence            3667776  479999999999999999999999988 79999999999999998 9999999999866665

>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A

Probab=90.44  E-value=0.24  Score=35.94  Aligned_cols=49  Identities=16%  Similarity=0.137  Sum_probs=28.0

Q ss_pred             cCccHHHHH-HhhCCcceecCceEEEecCCCCcccCch-HHHHHHHHhcCCccEEEEec
Q 031196           50 HNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-YEKIKRNRSLGLHTLCLLDI  106 (164)
Q Consensus        50 pGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s~-y~~I~~N~~~glHTlvLLDi  106 (164)
                      ||+|++.++ +.+|++..+    ++  |  .++.|... -..-.+.+...-+|+|+..-
T Consensus         1 PG~sA~~~Al~~sGlp~~~----F~--F--~Gflp~~~~r~~~l~~la~~~~TlVfyes   51 (115)
T 3ffy_A            1 SNATAFVPALVASGLPNEK----FC--F--EGFLPQKKGRMTKLKSLVDEHRTMVFYES   51 (115)
T ss_dssp             -CTTTHHHHHHHTTSCCSS----EE--E--EESCCSSTTHHHHHHHTTTCCSEEEEEEC
T ss_pred             CchhHHHHHHHHcCCCCCc----EE--E--EeeCCCCccHHHHHHHHhCCCCeEEEEec
Confidence            899998877 999999553    22  2  25555422 11222344444478888543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d1wdea_	289	c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum	2e-24
d2deka1	265	c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc	5e-23
d1vhva_	251	c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A	6e-16

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

 Score = 93.6 bits (232), Expect = 2e-24
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 17/152 (11%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VMNAVG 59
            +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V  A G
Sbjct: 64  DLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARG 123

Query: 60  ICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
              L  YRFG TV++P       P S   +I  N   GLHT  LLD+             
Sbjct: 124 ATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALLDVD------------ 171

Query: 120 KKLYEPPRYMTVNIAIEQLLEVELLQGESGKA 151
               E    ++    +  LLE +        A
Sbjct: 172 ----ERGVQLSPGQGVSLLLEADREYAREAGA 199

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 89.8 bits (222), Expect = 5e-23
 Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 15/156 (9%)

Query: 3   EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICG 62
               + +L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ +AVGI G
Sbjct: 65  LNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITG 124

Query: 63  LQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKL 122
           L +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++            
Sbjct: 125 LHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK------------ 172

Query: 123 YEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 158
                YMT N A+E LL+VE ++       +  +++
Sbjct: 173 ---RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVV 205

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 70.6 bits (172), Expect = 6e-16
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 5/139 (3%)

Query: 1   MVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN-AVG 59
            +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+     G
Sbjct: 61  DLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCG 120

Query: 60  ICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRG 119
           + GL  YRFG++ ++ +        +    IK NRS+  HTL  LD+  +  ++      
Sbjct: 121 LTGLHNYRFGKSATVSWHR----SQTPVNVIKANRSIDAHTLLFLDLHPEPMTIGHAVEN 176

Query: 120 KKLYEPPRYMTVNIAIEQL 138
               +        + I + 
Sbjct: 177 LIAEDAQMKDLYAVGIARA 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1wdea_	289	Diphthine synthase, DphB {Aeropyrum pernix [TaxId:	99.98
d2deka1	265	Diphthine synthase, DphB {Pyrococcus horikoshii [T	99.94
d1vhva_	251	Diphthine synthase, DphB {Archaeon Archaeoglobus f	99.94
d1ve2a1	235	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.61
d1s4da_	265	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.52
d1cbfa_	239	Cobalt precorrin-4 methyltransferase CbiF {Bacillu	99.49
d2bb3a1	195	Precorrin-6y methylase CbiE {Archaeoglobus fulgidu	99.39
d1pjqa2	242	Siroheme synthase CysG, domains 4 and 5 {Salmonell	99.39
d1wyza1	233	Putative methytransferase BT4190 {Bacteroides thet	98.93
d1va0a1	225	Hypothetical protein TTHA0667 {Thermus thermophilu	98.57

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

Probab=99.98  E-value=8.2e-33  Score=230.49  Aligned_cols=146  Identities=29%  Similarity=0.371  Sum_probs=129.4

Q ss_pred             hhchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         2 vE~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      .|+..+.|++.|++++||+|+.|||++|+||.+++.+|++.||+|++|||+||++|+ |++|+|+|+||.++++||++.+
T Consensus        65 ~e~~~~~i~~~a~~~~va~L~~GDP~i~~~~~~l~~~~~~~gi~v~vIPGiSs~~aA~a~~Gl~~~~f~~~~sl~~~~~~  144 (289)
T d1wdea_          65 LEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRG  144 (289)
T ss_dssp             HHTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGC
T ss_pred             HHHHHHHHHHHhcCCCeEEEeCCCCcccccHHHHHHHHHhcCCcEEEECCHhHHHHHHHHhCCCcccccEEEEeeeecCC
Confidence            356678899999999999999999999999999999999999999999999999988 9999999999999999999999


Q ss_pred             cccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCC-----CCCCCcce
Q 031196           81 WRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGE-----SGKAHELK  155 (164)
Q Consensus        81 ~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~-----~~~~~~~~  155 (164)
                      |+|.|++++++.|+.+|+|||||+|++..                .+||.+.+|+.+|+++.++...     ..+.+++.
T Consensus       145 ~~p~s~~~~i~~~~~~~l~tlvl~~~~~~----------------~~~m~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~  208 (289)
T d1wdea_         145 VTPISVARRIYLNLCAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPS  208 (289)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCE
T ss_pred             cCCCchHHHHHHHHHcCCchhhhhhcccc----------------CceeeHHHHHHHHHHHHHHHHHhccchhhhCCCCe
Confidence            99999999999999999999999999843                5799999999999999776432     23444444


Q ss_pred             -eeeecccc
Q 031196          156 -IILKQLQT  163 (164)
Q Consensus       156 -~v~~~~~~  163 (164)
                       +|+.++++
T Consensus       209 v~v~~~lg~  217 (289)
T d1wdea_         209 VLVEAGAGG  217 (289)
T ss_dssp             EEEECCGGG
T ss_pred             EEEEEeCCC
Confidence             56666664

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.94  E-value=1.1e-26  Score=190.92  Aligned_cols=146  Identities=38%  Similarity=0.666  Sum_probs=131.4

Q ss_pred             hchHHHHH-hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~-~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+..++++ +.+++++||+|+.|||++|+||.+++.++++.|++|++|||+|+++|++++|++.+.++.+++++|++.+|
T Consensus        64 ~~~~~~~~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~  143 (265)
T d2deka1          64 ELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNW  143 (265)
T ss_dssp             HHHHHHHTHHHHTTSEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTB
T ss_pred             HHHHHHHHHHHHcCCCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCC
Confidence            44555544 66668999999999999999999999999999999999999999999988999999999999999999999


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceee-eec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII-LKQ  160 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v-~~~  160 (164)
                      .|.+++++++.|+..|+|+++++|.....               ++||++..|.++|+++.+...++.+++|+.|+ +.+
T Consensus       144 ~~~~~~e~i~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~a~~~L~ei~~~l~~~g~~~dtpv~v~~~  208 (265)
T d2deka1         144 FPTSYYDVIKENAERGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLAR  208 (265)
T ss_dssp             CCCHHHHHHHHHHHHTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEES
T ss_pred             cCCcchhhHHHHHHcCCchhhhhhhcCcc---------------cEEecHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence            99999999999999999999999998654               67999999999999999999888888888754 456


Q ss_pred             ccc
Q 031196          161 LQT  163 (164)
Q Consensus       161 ~~~  163 (164)
                      +++
T Consensus       209 ~g~  211 (265)
T d2deka1         209 AGS  211 (265)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            654

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=1.3e-26  Score=188.74  Aligned_cols=133  Identities=32%  Similarity=0.580  Sum_probs=116.2

Q ss_pred             hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      |+..+.|++.+++++||+|+.|||++|+||.+++.+++++|++|++|||+||++|+ |++|+++++|+.++++++.+   
T Consensus        63 ~~~~~~i~~~~~~~~vv~L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~~~---  139 (251)
T d1vhva_          63 EENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSWHR---  139 (251)
T ss_dssp             TTTHHHHHHHHTTSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECSSC---
T ss_pred             HHHHHHHHHHhcCCcEEEEecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeeccC---
Confidence            56678899999999999999999999999999999999999999999999999998 99999999999999998743   


Q ss_pred             ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eeeec
Q 031196           82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IILKQ  160 (164)
Q Consensus        82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~~~  160 (164)
                       +.++++.+..|..+|+||+|++++.                  ++||++.+|+++||..+..      .+|+. +++.|
T Consensus       140 -~~~~~~~i~~~~~~~~~Tlv~~~~~------------------~~~~~~~~~~~~ll~~~~~------~~d~~v~vv~~  194 (251)
T d1vhva_         140 -SQTPVNVIKANRSIDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDAQ------MKDLYAVGIAR  194 (251)
T ss_dssp             -CSHHHHHHHHHHHTTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCGG------GGGSEEEEEES
T ss_pred             -CCCchhhHHHHHhcCCCcEEEeccc------------------cccchHHHHHHHHHHHcCC------CCCCcEEEEEe
Confidence             6678999999999999999999987                  4689999999999875432      34444 44566


Q ss_pred             ccc
Q 031196          161 LQT  163 (164)
Q Consensus       161 ~~~  163 (164)
                      +++
T Consensus       195 lg~  197 (251)
T d1vhva_         195 AGS  197 (251)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            654

>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=6.7e-16  Score=120.52  Aligned_cols=81  Identities=20%  Similarity=0.186  Sum_probs=69.8

Q ss_pred             hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196            3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET   80 (164)
Q Consensus         3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~   80 (164)
                      ++..++|.+.++ +++|++++.|||++|+|+.+++.++.+.++++++||||||++|+ |++|+++++++...++.+.+..
T Consensus        65 ~~~~~~i~~~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~i~veviPGiSs~~aaaa~~g~~~~~~~~~~~~~~~~~~  144 (235)
T d1ve2a1          65 EAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGH  144 (235)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESS
T ss_pred             HHHHHHHHHHHHcCCeEEEEecccccccchHHHHHHHHhhCCCCEEEeccccHHHhhhhhcCCcccccccccccccccch
Confidence            344566777777 58999999999999999999999999999999999999999998 9999999999988888766554


Q ss_pred             ccc
Q 031196           81 WRP   83 (164)
Q Consensus        81 ~~P   83 (164)
                      +..
T Consensus       145 ~~~  147 (235)
T d1ve2a1         145 DPA  147 (235)
T ss_dssp             CTT
T ss_pred             hhc
Confidence            433

>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

Probab=99.52  E-value=3.7e-14  Score=113.18  Aligned_cols=104  Identities=12%  Similarity=0.089  Sum_probs=79.5

Q ss_pred             chHHHHHhhccc-CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196            4 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW   81 (164)
Q Consensus         4 ~~~~~I~~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~   81 (164)
                      +..+.+++.|++ ++|++|+.|||++|+++..+...+.+.|++++||||+|+++|+ +.+|++++.++.+-++.+.+..+
T Consensus        75 ~~~~~~~~~a~~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~  154 (265)
T d1s4da_          75 DISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD  154 (265)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC
T ss_pred             HHHHHHHHHHHCCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCC
Confidence            344567777774 8999999999999999999999999999999999999999998 99999999999888877666554


Q ss_pred             ccCchHH-HHHHHHhcCCccEEEEecc
Q 031196           82 RPGSFYE-KIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        82 ~P~s~y~-~I~~N~~~glHTlvLLDi~  107 (164)
                      .+...-. .....+...-+|+++++-.
T Consensus       155 ~~~~~~~~~~l~~~~~~~~~~v~~~~~  181 (265)
T d1s4da_         155 SSGLVPDRINWQGIASGSPVIVMYMAM  181 (265)
T ss_dssp             -------CCCHHHHHTTCSEEEEESCS
T ss_pred             ccccccchHHHHHHhccCcceeccchH
Confidence            4332211 1123344455888887654

>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Cobalt precorrin-4 methyltransferase CbiF
species: Bacillus megaterium [TaxId: 1404]

Probab=99.49  E-value=1.3e-13  Score=106.77  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=80.9

Q ss_pred             hHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            5 KADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         5 ~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      ..+++.+.++ +++|+++..|||++|++|.++..++++.++++++|||+|+++++ +++|++++.++...++++.....+
T Consensus        70 ~~~~~~~~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~~~~~vipGiss~~~a~a~~gi~~~~~~~~~~~~~~~~~~~  149 (239)
T d1cbfa_          70 MVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGR  149 (239)
T ss_dssp             HHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSS
T ss_pred             HHHHHHHHhhcCceEEEeeccccccccccccccccccccceeeEeccCccchhhhhhhcCcccccCcceeeeeeecccCC
Confidence            3455665555 68999999999999999999999999999999999999999998 999999999999888877655444


Q ss_pred             cCch-HHHHHHHHhcCCccEEEEeccc
Q 031196           83 PGSF-YEKIKRNRSLGLHTLCLLDIRV  108 (164)
Q Consensus        83 P~s~-y~~I~~N~~~glHTlvLLDi~~  108 (164)
                      .... ...+ .+...+.++.++.....
T Consensus       150 ~~~~~~~~~-~~~~~~~~~~~~~~~~~  175 (239)
T d1cbfa_         150 TPVPEFEKL-TDLAKHKCTIALFLSST  175 (239)
T ss_dssp             SCCCGGGCH-HHHHTTCSEEEEESCTT
T ss_pred             CccchHHHH-HHHhhcccccccccccc
Confidence            3323 3334 44445558888876653

>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Precorrin-6y methylase CbiE
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.39  E-value=1.2e-13  Score=106.01  Aligned_cols=93  Identities=20%  Similarity=0.224  Sum_probs=71.6

Q ss_pred             chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      +....+++.+++++||||+.|||++|+|+.+++.++.  +.++++|||+||++|+ |++|.++-   +...+.+..   +
T Consensus        55 ~~~~~~~~~~~g~~vv~L~~GDP~iy~~~~~l~~~~~--~~~~eviPGiss~~aaaa~~~~p~~---~~~~i~~~~---~  126 (195)
T d2bb3a1          55 DEIRRIMEEGREREVAVISTGDPMVAGLGRVLREIAE--DVEIKIEPAISSVQVALARLKVDLS---EVAVVDCHA---K  126 (195)
T ss_dssp             HHHHHHHHHHHHSCEEEEESBCTTTTTSHHHHHTSCC--SSEEEEECCCCHHHHHHHHHTCCGG---GEEEEEC------
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCCcccchhHHHhhhhc--ccceecCCcchhhhhHHHHhcCCCC---CcEEEecCC---C
Confidence            4455677777889999999999999999999887764  5788999999999998 99999875   445554422   2


Q ss_pred             cCchHHHHHHHHhcCCccEEEEecc
Q 031196           83 PGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        83 P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                         .++.+...+..+-++++|+|..
T Consensus       127 ---~~~~~~~~l~~~~~~~vl~~~~  148 (195)
T d2bb3a1         127 ---DFDAELTELLKYRHLLILADSH  148 (195)
T ss_dssp             ----CCHHHHTHHHHCEEEEEECTT
T ss_pred             ---ChHHHHHHhhcCCeEEEEeCCc
Confidence               2455666677777899998865

>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Siroheme synthase CysG, domains 4 and 5
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.39  E-value=5.2e-13  Score=103.53  Aligned_cols=75  Identities=21%  Similarity=0.214  Sum_probs=65.4

Q ss_pred             hHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196            5 KADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE   79 (164)
Q Consensus         5 ~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~   79 (164)
                      ..+.+++.+. +++|++++.|||++|+++.+++.++++.++++++|||+||++++ ++.|++++.++.+.++.+...
T Consensus        67 ~~~~~~~~~~~g~~V~~l~~Gdp~~~~~~~~l~~~~~~~~~~v~vipGiss~~~aaa~~~~~~~~~~~~~~~~~~~~  143 (242)
T d1pjqa2          67 INQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTG  143 (242)
T ss_dssp             HHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC
T ss_pred             HHHHHHHHHHCCCeEEEEeCCCcceecchhhHHHHHhhcCceEeecCCcchHHHHHHHhhhccccCCceeeeeeccc
Confidence            3455666555 58999999999999999999999999999999999999999987 999999999999888766543

>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Putative methytransferase BT4190
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.93  E-value=3e-09  Score=84.39  Aligned_cols=100  Identities=13%  Similarity=0.104  Sum_probs=68.1

Q ss_pred             HHHHHhhcc-cCCeEEE-ecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196            6 ADKILSESQ-ESNVAFL-VVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR   82 (164)
Q Consensus         6 ~~~I~~~a~-~~~VafL-t~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~   82 (164)
                      ..+|++.++ +++||++ -.|||.++.==..++..|.+.||+|++|||+|+.+|+ +.+|++..+|+-.-.+|+....-.
T Consensus        72 ~~~i~~~l~~g~~v~lvsDaG~P~IsDPG~~lV~~~~~~gi~v~iiPG~SA~~aA~s~sG~~~~~~~f~gfl~~~~~~~~  151 (233)
T d1wyza1          72 ISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSFAFHGYLPIEPGERA  151 (233)
T ss_dssp             HHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSEEEEEECCSSTTHHH
T ss_pred             hHHHHHHHhcCCeEEEEeccccccccchhhhhhhhhhcccccccccccCcchheeeeeccccccccccceeeeeecCccc
Confidence            345666655 6899998 5699999988899999999999999999999999988 999999999999988888554321


Q ss_pred             cCchHHHHHHHHhcCCccEEEEecc
Q 031196           83 PGSFYEKIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        83 P~s~y~~I~~N~~~glHTlvLLDi~  107 (164)
                      .  ....+..+....-.|+|++.--
T Consensus       152 ~--~~~~l~~~~~~~~~t~v~~e~~  174 (233)
T d1wyza1         152 K--KLKTLEQRVYAESQTQLFIETP  174 (233)
T ss_dssp             H--HHHHHHHHHHHHTCEEEEEECG
T ss_pred             c--hhhhhhhhhhccCceeEEEecc
Confidence            1  1222222222222688876543

>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Hypothetical protein TTHA0667
species: Thermus thermophilus [TaxId: 274]

Probab=98.57  E-value=6.1e-08  Score=72.98  Aligned_cols=91  Identities=14%  Similarity=0.013  Sum_probs=65.3

Q ss_pred             hhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCchHH
Q 031196           11 SESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE   88 (164)
Q Consensus        11 ~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~   88 (164)
                      +.+. .+.++++..|||++++++..+....+..++.+++|||+|+++++ ++.+.+.+..+......-+...      -.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipgiss~~~a~~~~~~~~~~~~~~~~~~~~~~~------~~  143 (225)
T d1va0a1          70 RHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLASGLPLTHRGLAHGFAAVSGVLEGG------GY  143 (225)
T ss_dssp             HHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTTCCCSSBTTTBSEEEEEESSCGGG------CC
T ss_pred             HHhhccceEEEecCCcccccchhHHHHhhhccccceEEECCcccHHHHHhhccccCccccceeEEEeecCCc------ch
Confidence            3334 46778888899999999999999999999999999999999988 8899988877666544321111      11


Q ss_pred             HHHHHHhcCCccEEEEecc
Q 031196           89 KIKRNRSLGLHTLCLLDIR  107 (164)
Q Consensus        89 ~I~~N~~~glHTlvLLDi~  107 (164)
                      ....++..+.+++++++..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~  162 (225)
T d1va0a1         144 PDLRPFARVPTLVVLMGVG  162 (225)
T ss_dssp             CCCTTTTTCSSEEEESCST
T ss_pred             hHHHHHhhcccceeeeccc
Confidence            1123456665666665544