Citrus Sinensis ID: 031367

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Secondary Structure (PSIPRED)
cccEEEEEEcccEEEEEEEccccEEEcccccccEEEEEEccccccccEEEEEEEcccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEEEEcccHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccEEEEEEEccccccccccccccEEEEEcccHHHHHHHHHEccccccccEEEEEEEcccccccEEEEEEEEcccccccccccEEEEEEEcHHHHHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccHHHccc
Coil and Loop (DISEMBL)
MPALFSLLSNSGSIVVVIKSAYsllfnpkdlplndvvFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNygvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgsipglntkitsfvdpdgwktvLVDNEDFLKEIQSE
Flexible Loop (DISEMBL)
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgsipglnTKITsfvdpdgwktVLVDNEDFLKEIQSE
Low Complexity Region (SEG)
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered region (IsUnstruct)
****FSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISOPRED)
**ALF**LSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD***********
Disordered Region (DISEMBL)
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered Region (DISPRO)
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPALFSLLSNSGSIVVVIKSAYSLLFNPKDLPLNDVVFVGSLQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q948T6	291	Lactoylglutathione lyase	yes	no	0.708	0.391	0.811	2e-51
Q39366	282	Putative lactoylglutathio	N/A	no	0.937	0.535	0.590	1e-47
Q8W593	350	Probable lactoylglutathio	no	no	0.701	0.322	0.683	3e-43
Q9KT93	138	Probable lactoylglutathio	no	no	0.658	0.768	0.472	2e-24
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.726	0.866	0.426	8e-23
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.726	0.866	0.426	8e-23
P44638	135	Lactoylglutathione lyase	yes	no	0.645	0.770	0.462	8e-23
P0AC83	135	Lactoylglutathione lyase	yes	no	0.726	0.866	0.418	8e-22
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.726	0.866	0.418	8e-22
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.726	0.866	0.418	8e-22

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 106/117 (90%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGMKLLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+D
Sbjct: 175 KALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTED 234

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKSAE V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct: 235 VYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  188 bits (478), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/166 (59%), Positives = 119/166 (71%), Gaps = 15/166 (9%)

Query: 8   LSNSGSIVVVIKSAYSLLF-----NPKDLPLNDVVF-VGSL--------QALGMKLLRTV 53
           +   GS++  +K      F      P   PL  V+  VG L        +ALGM+LLR +
Sbjct: 118 VKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRI 177

Query: 54  DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 113
           ++PEY  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V
Sbjct: 178 ERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIV 236

Query: 114 TQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
            QELGGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKE++
Sbjct: 237 NQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 97/117 (82%), Gaps = 4/117 (3%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +A GM+LLRT D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDD
Sbjct: 238 KAFGMELLRTRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDD 297

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYK+AE + L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct: 298 VYKTAEAIKL----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 4/110 (3%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           Q +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD
Sbjct: 25  QVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDD 84

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
           +Y + + +    +  GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct: 85  IYATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 12/129 (9%)

Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
             Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+
Sbjct: 64  ESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGY 119

Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEAKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 12/129 (9%)

Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
             Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+
Sbjct: 64  ESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGY 119

Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEAKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 4/108 (3%)

Query: 45  LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 104
           LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y  G AY  +AI  DD+Y
Sbjct: 24  LGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIY 83

Query: 105 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
            + E V    +  GG +TR+ G + G +T I    DPDG+K   ++N+
Sbjct: 84  ATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENK 127

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 12/129 (9%)

Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
            +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGY 119

Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 12/129 (9%)

Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
            +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGY 119

Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 12/129 (9%)

Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
            +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGY 119

Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
2213425	291	hypothetical protein [Citrus x paradisi]	0.714	0.395	0.991	2e-61
224078584	294	predicted protein [Populus trichocarpa]	0.714	0.391	0.873	2e-55
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	0.925	0.510	0.680	2e-54
388493080	274	unknown [Medicago truncatula]	0.701	0.412	0.846	3e-53
356555674	287	PREDICTED: putative lactoylglutathione l	0.913	0.512	0.670	1e-52
356531939	296	PREDICTED: putative lactoylglutathione l	0.701	0.381	0.820	3e-52
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.701	0.391	0.820	8e-52
449433964	292	PREDICTED: putative lactoylglutathione l	0.714	0.393	0.798	3e-50
388520197	284	unknown [Lotus japonicus]	0.701	0.397	0.803	4e-50
356520071	303	PREDICTED: putative lactoylglutathione l	0.701	0.372	0.811	4e-50

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 118/119 (99%), Positives = 119/119 (100%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD
Sbjct: 173 KALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 232

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 161
           VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Sbjct: 233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/119 (87%), Positives = 114/119 (95%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGMKLLR +D+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDD
Sbjct: 175 KALGMKLLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDD 234

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 161
           VYKSAEVVNLVTQELGGKITRQPG IPG+NTKITSF+DPDGWK+VLVDNEDFLKE+  E
Sbjct: 235 VYKSAEVVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/163 (68%), Positives = 127/163 (77%), Gaps = 14/163 (8%)

Query: 13  SIVVVIKSAYSLLFN-----PKDLPLNDVVF-VGSLQ--------ALGMKLLRTVDKPEY 58
           S++   K     +F      P   PL  V+  VG L+        ALGMK+++  D+PEY
Sbjct: 129 SVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMVKKTDRPEY 188

Query: 59  KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG 118
           KY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVT+ELG
Sbjct: 189 KYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTKELG 248

Query: 119 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 161
           GKITRQPG IPGLNTKITSF+DPDGWKTVLVDNEDFLKE+  E
Sbjct: 249 GKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493080|gb|AFK34606.1| unknown [Medicago truncatula]

 Score =  212 bits (540), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 110/117 (94%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALG+KL RTVD+P+YKYTLAMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVA+ TDD
Sbjct: 158 KALGLKLARTVDRPQYKYTLAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAVGTDD 217

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKSAE+VNL TQE GGKITRQPG IPGLNTKITSF+DPDGWKTVLVDN+DFLKE++
Sbjct: 218 VYKSAELVNLATQEFGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/161 (67%), Positives = 129/161 (80%), Gaps = 14/161 (8%)

Query: 13  SIVVVIKS----AYSLLFNPKDL-PLNDVVF-VGSLQ--------ALGMKLLRTVDKPEY 58
           S++  +K     A+ L+  P    PL  V+  VG L+        ALG+++++  D+PEY
Sbjct: 127 SVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKKTDRPEY 186

Query: 59  KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELG 118
           KYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVVN+VTQELG
Sbjct: 187 KYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVTQELG 246

Query: 119 GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           GKITRQPG IPGLNTKIT+F+DPDGWKTVLVDN+DFLKE++
Sbjct: 247 GKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 111/117 (94%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LG+++++  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDD
Sbjct: 180 KTLGLRVVKKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDD 239

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKSAEVVN+VTQELGGKITRQPG +PGLNTKITSF+DPDGWKTVLVDN+DFLKE++
Sbjct: 240 VYKSAEVVNIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  208 bits (529), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 110/117 (94%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGMKL++ VD+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDD
Sbjct: 173 KALGMKLVKKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDD 232

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKS EVV  V QELGGK+TR+PG IPG+NTKITSF+DPDGWKTVLVDNEDFLKE++
Sbjct: 233 VYKSGEVVEHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 108/119 (90%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGM+LL+ VD+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAI TDD
Sbjct: 174 KALGMRLLKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDD 233

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 161
           VYKSAEVVN V QELGGKITRQPG +PG+ TKI SF+DPDGWKTVLVDN DF KE+ ++
Sbjct: 234 VYKSAEVVNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 94/117 (80%), Positives = 107/117 (91%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALG+K+++  D+PE KYT+AMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVAI TDD
Sbjct: 168 KALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDD 227

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKSAE+VNL TQE GGKITRQPG IPGLNTKI SF+DPDGWKTVLVDN+DFLKE++
Sbjct: 228 VYKSAELVNLATQEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520071|ref|XP_003528689.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 108/117 (92%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +ALGMK++R VDKPEYKYT+AMLGY EE +TTVLELTYNYGVTEY+KGNAYAQ+AI TDD
Sbjct: 187 KALGMKVVRKVDKPEYKYTIAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDD 246

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYKSAEVVN V +E+GGKITRQPG IPGLNTK TSF+DPDGWKTVLVDN DFL+E++
Sbjct: 247 VYKSAEVVNQVIKEVGGKITRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.701	0.322	0.683	2e-40
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.658	0.768	0.472	5.3e-24
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.658	0.768	0.472	5.3e-24
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.658	0.785	0.464	3.4e-22
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.614	0.727	0.480	1.5e-21
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.658	0.779	0.437	4.9e-21
WB|WBGene00006448	281	glod-4 [Caenorhabditis elegans	0.329	0.188	0.377	3e-07
UNIPROTKB|Q09253	281	glod-4 "Glyoxalase 1" [Caenorh	0.329	0.188	0.377	3e-07
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.484	0.266	0.376	3.3e-07
UNIPROTKB|E3N6P2	281	Cre-glod-4 "CRE-GLOD-4 protein	0.329	0.188	0.358	4.1e-07

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 80/117 (68%), Positives = 97/117 (82%)

Query:    43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
             +A GM+LLRT D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDD
Sbjct:   238 KAFGMELLRTRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDD 297

Query:   103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
             VYK+AE + L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct:   298 VYKTAEAIKL----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 52/110 (47%), Positives = 69/110 (62%)

Query:    43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
             Q +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD
Sbjct:    25 QVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDD 84

Query:   103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
             +Y + + +       GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:    85 IYATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 52/110 (47%), Positives = 69/110 (62%)

Query:    43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
             Q +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD
Sbjct:    25 QVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDD 84

Query:   103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
             +Y + + +       GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:    85 IYATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 52/112 (46%), Positives = 74/112 (66%)

Query:    43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
             + LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+
Sbjct:    22 KVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN 81

Query:   103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNED 153
                +AE    + Q  GG +TR+ G + G  T + +FV DPDG+K  L++ +D
Sbjct:    82 ---AAEACEKIRQN-GGNVTREAGPVKG-GTTVIAFVEDPDGYKIELIEEKD 128

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 50/104 (48%), Positives = 64/104 (61%)

Query:    43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQ-TTVLELTYNYGVTEYTKGNAYAQVAISTD 101
             Q LGMKLLRT + PEYKY+LA +GY EE     V+ELTYN+G  +Y  G  +  +AI  D
Sbjct:    23 QVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYNWGTEKYDLGTGFGHIAIGDD 82

Query:   102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 145
             D+Y   E +       GGK+TR PG + G  T+I    DPDG+K
Sbjct:    83 DIYARCEAIAAA----GGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 49/112 (43%), Positives = 72/112 (64%)

Query:    42 LQALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD 101
             +  LGMKLLR  +  EYKYTLA +GY  ED+  V+ELTYN+GV +Y  G A+  +AI  D
Sbjct:    22 IDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNWGVEKYELGTAFGHIAIGVD 81

Query:   102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNE 152
             DVY++ E +    ++ GGK+ R+   + G  T + +FV DPD +K  L+ ++
Sbjct:    82 DVYETVERI----RKSGGKVAREAAPVLG-GTTVIAFVEDPDNYKIELIQDD 128

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

WB|WBGene00006448 glod-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 122 (48.0 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query:    59 KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 111
             +++  M+GY  ED+  VLE+TYNY + +Y  GN Y  + I +D +++  E +N
Sbjct:    51 RWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKIN 103

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|Q09253 glod-4 "Glyoxalase 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 122 (48.0 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query:    59 KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 111
             +++  M+GY  ED+  VLE+TYNY + +Y  GN Y  + I +D +++  E +N
Sbjct:    51 RWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKIN 103

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0009438 "methylglyoxal metabolic process" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 122 (48.0 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 35/93 (37%), Positives = 52/93 (55%)

Query:    59 KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY-KSAEVVNLVTQEL 117
             +++  M+GY  E    V+ELTYNYGV+ Y  GN +  V I + D+  ++AE    VTQ +
Sbjct:    59 RWSKTMVGYGPESSHFVIELTYNYGVSSYEMGNDFGGVTIHSKDILSRAAEHSYPVTQ-V 117

Query:   118 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 150
              GK     GS+      +TS   PDG+K  ++D
Sbjct:   118 SGKA----GSL------LTS---PDGYKFYVID 137

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|E3N6P2 Cre-glod-4 "CRE-GLOD-4 protein" [Caenorhabditis remanei (taxid:31234)]

 Score = 115 (45.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
 Identities = 19/53 (35%), Positives = 33/53 (62%)

Query:    59 KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 111
             +++  M+GY  ED+  VLELTYNY + +Y  GN Y  + I +D +++    ++
Sbjct:    51 RWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFEKISTID 103

GO:0008340 "determination of adult lifespan" evidence=ISS

GO:0009438 "methylglyoxal metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.8119	0.7080	0.3917	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_IV1582	lactoylglutathione lyase (EC-4.4.1.5) (294 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_1250018	hydroxyacylglutathione hydrolase (EC-3.1.2.6) (259 aa)						•	•		0.911
	gw1.XI.471.1	tryptophan synthase, beta chain (EC-4.2.1.20) (398 aa)						•			0.800
	gw1.XI.1757.1	tryptophan synthase, beta chain (EC-4.2.1.20) (378 aa)						•			0.800
	gw1.123.110.1	hypothetical protein (461 aa)						•			0.800
	fgenesh4_pg.C_LG_XIII000422	tryptophan synthase, beta chain (EC-4.2.1.20) (410 aa)						•			0.800
	eugene3.00120775	hypothetical protein (752 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_XV0575	hypothetical protein (700 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_V1322	tryptophan synthase (EC-4.2.1.20) (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_II0422	SubName- Full=Putative uncharacterized protein; (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_280257	threonine deaminase (EC-4.3.1.19) (543 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	161
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	4e-70
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-35
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	2e-29
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	6e-29
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-26
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-13
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	4e-11
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-09
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-08

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  213 bits (543), Expect = 4e-70
 Identities = 86/117 (73%), Positives = 100/117 (85%), Gaps = 4/117 (3%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           +A GMKLLR  D PEYKYT+AM+GY  ED+TTVLELTYNYGVTEYTKGNAYAQ+AI TDD
Sbjct: 174 KAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDD 233

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 159
           VYK+AE + LV    GGKITR+PG +PG+NTKIT+ +DPDGWKTV VDN DFLKE++
Sbjct: 234 VYKTAEAIKLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  120 bits (302), Expect = 2e-35
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 4/109 (3%)

Query: 45  LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY 104
           LGMKLLR  D PE K++LA LGY +E    V+ELT+N+G  +Y  GN +  +AI  DDVY
Sbjct: 39  LGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVY 98

Query: 105 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 153
           K+ E V    + LGG + R+PG + G  T I    DPDG+K  L+  + 
Sbjct: 99  KACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  108 bits (271), Expect = 2e-29
 Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 4/107 (3%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LGMKLLR  D PE KYT A LGY  ED   V+ELTYNYGV +Y  G  +    I+ +D
Sbjct: 44  ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVED 103

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 149
           V K+ E+V    +  GGK+TR+PG + G  + I    DPDG+K  L+
Sbjct: 104 VAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELI 146

Length = 286

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  102 bits (256), Expect = 6e-29
 Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 12/123 (9%)

Query: 39  VGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG 90
           VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G
Sbjct: 4   VGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELG 63

Query: 91  NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 150
            AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++
Sbjct: 64  TAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Query: 151 NED 153
            +D
Sbjct: 120 EKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 96.8 bits (242), Expect = 1e-26
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 9/103 (8%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTD 101
             LGMKLLR  D PE K+TL  LGY +ED   VLELTYN+G  E Y  GN +  +A + D
Sbjct: 20  DVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVD 79

Query: 102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 143
           DVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 80  DVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 63.1 bits (154), Expect = 2e-13
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 27/118 (22%)

Query: 45  LGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAY 93
           LGMK+LR            + P + K++  M+GY  ED   V+ELTYNYG+ +Y  GN +
Sbjct: 24  LGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGNDF 83

Query: 94  AQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD 150
             + I +     +A+  N  VT+   G    +                P G+K  L+D
Sbjct: 84  LGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK---------------APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 43/131 (32%)

Query: 45  LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV-----------------LELTYNYGVTE- 86
           LGM LL+ +D PE K++L  LGY  ED  T                  +ELT+N+G TE 
Sbjct: 49  LGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVWTFGRKATIELTHNWG-TES 105

Query: 87  ------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTK 134
                 Y  GN+    +  + I+ DDVYK+ E      ++LG +  ++P  G + GL   
Sbjct: 106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGKMKGL--- 158

Query: 135 ITSFV-DPDGW 144
             +F+ DPDG+
Sbjct: 159 --AFIKDPDGY 167

Length = 185

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 51.6 bits (124), Expect = 4e-09
 Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 36  VVFVGSLQA--------LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 87
            + VG L+         LG KL+  VD  E     A           VLEL  N      
Sbjct: 6   ALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNETPPPA 61

Query: 88  ---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
                G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPDG 
Sbjct: 62  AAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPDGN 116

Query: 145 K 145
            
Sbjct: 117 L 117

Length = 120

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 51.9 bits (124), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 39/131 (29%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVTE- 86
           + LGM LL+ +D PE K++L  +GY +                 Q   +ELT+N+G TE 
Sbjct: 95  RVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWG-TES 153

Query: 87  ------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTK 134
                 Y  GN+    +  + I+ DDVYK+ E      +ELG +  ++P  G + G+   
Sbjct: 154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKMKGI--- 206

Query: 135 ITSFV-DPDGW 144
             +F+ DPDG+
Sbjct: 207 --AFIKDPDGY 215

Length = 233

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
PLN02367	233	lactoylglutathione lyase	99.89
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
PRK10291	129	glyoxalase I; Provisional	99.81
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.81
PLN02300	286	lactoylglutathione lyase	99.79
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.79
PLN02300	286	lactoylglutathione lyase	99.78
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.74
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.72
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.71
PRK11478	129	putative lyase; Provisional	99.71
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.7
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.66
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.66
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.66
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.65
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.65
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.64
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.64
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.62
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.61
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.6
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.59
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.58
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.58
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.57
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.57
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.57
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.57
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.57
PRK06724	128	hypothetical protein; Provisional	99.57
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.57
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.56
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.56
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.55
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.55
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.55
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.54
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.54
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.54
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.53
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.53
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.53
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.53
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.52
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.52
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.52
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.52
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.5
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.5
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.5
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.49
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.49
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.47
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.46
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.44
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.44
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.44
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.44
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.43
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.42
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.41
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.41
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.4
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.4
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.39
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.38
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.38
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.35
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.34
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.34
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.33
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.32
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.3
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.3
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.26
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.24
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.2
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.96
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.76
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.74
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.62
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.59
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.58
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.56
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.34
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.15
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.12
COG3607	133	Predicted lactoylglutathione lyase [General functi	97.9
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.79
PRK10148	147	hypothetical protein; Provisional	97.35
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	97.27
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.24
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.23
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.09
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.99
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	96.89
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	95.99
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	95.68
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	95.31
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.92
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.89
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	94.4
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	93.89
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	93.4
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	92.62
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	91.92
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	91.58
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	90.66
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	90.52
PRK11478	129	putative lyase; Provisional	90.46
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	90.46
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	90.26
PLN03042	185	Lactoylglutathione lyase; Provisional	89.95
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	89.55
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	88.69
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	87.92
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	87.17
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	86.1
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	85.98
PLN02367	233	lactoylglutathione lyase	85.12
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	84.54
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	84.37
PF02676	205	TYW3: Methyltransferase TYW3; InterPro: IPR003827	84.2
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	83.44
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	83.1
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	82.46
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	81.67
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	80.64

>PLN02367 lactoylglutathione lyase

Probab=99.89  E-value=5.3e-22  Score=155.19  Aligned_cols=124  Identities=31%  Similarity=0.561  Sum_probs=101.8

Q ss_pred             CCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCC---------------CCceEEEEeeeC
Q 031367           27 NPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNY   82 (161)
Q Consensus        27 ~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~leL~~~~   82 (161)
                      ......++|++ +|+|+        ++|||++.++.++++++++++|+++++.               .+...|||++++
T Consensus        70 ~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~  149 (233)
T PLN02367         70 ATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNW  149 (233)
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCC
Confidence            35679999999 99999        8999999999999888899999976431               124689999887


Q ss_pred             CCcc------cccC----CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           83 GVTE------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        83 ~~~~------~~~g----~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +...      |..+    .|++||||.|+|+++++++|    +++|+++..+|...++  .+.+||+|||||+|||++..
T Consensus       150 g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        150 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             CCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecc
Confidence            7541      4333    37999999999999999999    5999999988875432  57899999999999999987


Q ss_pred             Cchh
Q 031367          153 DFLK  156 (161)
Q Consensus       153 ~~~~  156 (161)
                      ...+
T Consensus       224 ~~~~  227 (233)
T PLN02367        224 TIGT  227 (233)
T ss_pred             cccc
Confidence            6553

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=1.6e-19  Score=137.58  Aligned_cols=123  Identities=28%  Similarity=0.531  Sum_probs=96.1

Q ss_pred             ecCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCC---------------CceEEEEee
Q 031367           25 LFNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTY   80 (161)
Q Consensus        25 ~~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~---------------~~~~leL~~   80 (161)
                      +.+....+++|++ +|+|+        ++|||++..+.+.+.++++++|+++++..               ....|||++
T Consensus        20 ~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~   99 (185)
T PLN03042         20 DEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTH   99 (185)
T ss_pred             CCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEE
Confidence            3446779999999 99999        89999999998777777889998754210               235899987


Q ss_pred             eCCCcc------ccc----CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           81 NYGVTE------YTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        81 ~~~~~~------~~~----g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      +++...      +..    +.|+.||||.|+|+++++++|    +++|+++...|....  ..+++||+|||||+|||++
T Consensus       100 ~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e  173 (185)
T PLN03042        100 NWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFD  173 (185)
T ss_pred             cCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEE
Confidence            654321      221    247999999999999999999    699999997775422  2567899999999999999


Q ss_pred             cCC
Q 031367          151 NED  153 (161)
Q Consensus       151 ~~~  153 (161)
                      ...
T Consensus       174 ~~~  176 (185)
T PLN03042        174 LKR  176 (185)
T ss_pred             CCC
Confidence            754

>PRK10291 glyoxalase I; Provisional

Probab=99.81  E-value=1.3e-18  Score=124.09  Aligned_cols=112  Identities=46%  Similarity=0.847  Sum_probs=85.8

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        ++|||++..+...+...+.++|++.++......++|..+++...+..++++.|+||+|+|+++++++
T Consensus         3 ~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~~~   82 (129)
T PRK10291          3 RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEK   82 (129)
T ss_pred             EecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHHHH
Confidence            67888        8999999887666655677888876543334567886544433334456789999999999999999


Q ss_pred             HhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          110 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       110 L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |    +++|+++..+|.+.+++..+.+||+|||||+|||++..+
T Consensus        83 l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         83 I----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             H----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            9    699999988776665554567899999999999999753

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.81  E-value=2.5e-18  Score=125.94  Aligned_cols=127  Identities=43%  Similarity=0.735  Sum_probs=95.1

Q ss_pred             CCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           27 NPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        27 ~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      +...++++|+. .|+|+        ++|||++..+...+.+++.+++++.++......+++..+++......+.+..|++
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~   91 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIA   91 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEE
Confidence            35678999999 99999        8999999877655555555667765432234556665433322233345788999


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchhh
Q 031367           98 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  157 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~~  157 (161)
                      |.|+|+++++++|    +++|+++..+|...+++..+.+||+|||||.|||++..+-.|+
T Consensus        92 f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  147 (150)
T TIGR00068        92 IGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDG  147 (150)
T ss_pred             EecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhh
Confidence            9999999999999    5999999888865555445788999999999999998765554

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02300 lactoylglutathione lyase

Probab=99.79  E-value=8.8e-18  Score=135.45  Aligned_cols=140  Identities=66%  Similarity=1.073  Sum_probs=110.5

Q ss_pred             EEEecCCce---eecCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeC
Q 031367           15 VVVIKSAYS---LLFNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY   82 (161)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~   82 (161)
                      +...|+|+.   +++..+..++.|+. .|+|+        ++|||++..+...+..+|..+++++.+......++++.+.
T Consensus       134 ~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~  213 (286)
T PLN02300        134 FVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNY  213 (286)
T ss_pred             EEECCCCCEEEEEeCCCCCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecC
Confidence            556788885   55667788999999 99999        9999999876554545677777765332234568886544


Q ss_pred             CCcccccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchhhh
Q 031367           83 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI  158 (161)
Q Consensus        83 ~~~~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~~~  158 (161)
                      +...+..++++.|++|.|+|++++++++    +++|+++..+|...++...+.++|+||||+.|+|++..+|.||.
T Consensus       214 ~~~~~~~g~~~~~i~~~v~di~~~~~~~----~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~  285 (286)
T PLN02300        214 GVTEYTKGNAYAQIAIGTDDVYKTAEAI----KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKEL  285 (286)
T ss_pred             CCCccccCCceeEEEEecCCHHHHHHHH----HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhc
Confidence            4333445678899999999999999999    59999999998888765457899999999999999999999874

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=6.5e-18  Score=121.54  Aligned_cols=106  Identities=32%  Similarity=0.503  Sum_probs=80.7

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCC-----------CcEEEEEeeccCCCCceEEEEeeeCCCcccccC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG   90 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----------g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g   90 (161)
                      .++.|++ +|+|+        ++|||++.++.+++.           +.|.++++++.++.....|||+++++..+++.+
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            3689999 99999        999999988776665           566667776543335678999988776556666


Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      ++  |++|.|++. ++.++|    +++|+++...|.       .++|++|||||+|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            55  566666666 345888    699999887553       27899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.78  E-value=8.9e-18  Score=135.43  Aligned_cols=122  Identities=46%  Similarity=0.746  Sum_probs=96.0

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +.+.+++|++ .|+|+        ++|||++..+...+...+..+|+..++...+..++|..+.+...+..+.++.|+||
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~   99 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGI   99 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEE
Confidence            6689999999 99999        99999998776555555666788665333356788864433333334567899999


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|+|+++++++|    +++|+++...|...+++..+.+||+|||||+|||+++..
T Consensus       100 ~v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300        100 AVEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             EeCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            999999999999    599999998887776654578899999999999999754

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=7.5e-18  Score=121.58  Aligned_cols=114  Identities=17%  Similarity=0.217  Sum_probs=82.8

Q ss_pred             cceeEEE-eeCCc-------cccCCEEEEEEeCCC-----------CcEEEEEeeccCCCCceEEEEeeeCCCcc-----
Q 031367           31 LPLNDVV-FVGSL-------QALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTE-----   86 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~-----------g~~~~~~l~~~~~~~~~~leL~~~~~~~~-----   86 (161)
                      .+++||+ .|+|+       ..|||++..+...++           ....++++..+.  +...|||+....+..     
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcCC
Confidence            5799999 99999       339999876653321           234556665432  356789875322211     


Q ss_pred             --cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           87 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        87 --~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                        ...+.|+.||||.|+|+++++++|    +++|+++..+|...++ ..+.+||+||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence              112357889999999999999999    6999999876655443 26889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=6.5e-17  Score=112.85  Aligned_cols=111  Identities=43%  Similarity=0.716  Sum_probs=84.4

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC-cccccCCCeeEEEEEeCC
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAISTDD  102 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~-~~~~~g~g~~Hiaf~V~D  102 (161)
                      ++||+ .|+|+        ++|||++..+...+++.+..+++..+.......++|....+. .....+++..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            58999 99999        899999988765555456667787643113466777643332 122334577899999999


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      +++++++|    +++|+++..+|...  +..+.+||+|||||+|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            99999999    69999999888754  2357899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.74  E-value=8.7e-17  Score=115.97  Aligned_cols=111  Identities=21%  Similarity=0.252  Sum_probs=82.9

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc------cccCCCeeEEE
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQVA   97 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~------~~~g~g~~Hia   97 (161)
                      ++|++ .|+|+        ++|||++.++...+  ....+++..+    ...++|........      ...+.+..|||
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            58999 99999        88999998875432  1233445432    45666642211111      12345788999


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           98 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |.|+|+++++++|    +++|+++..+|...+++ .+.+|++||||+.|||+++..+
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCCC
Confidence            9999999999999    69999999999875553 6899999999999999997654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.4e-17  Score=121.64  Aligned_cols=119  Identities=26%  Similarity=0.382  Sum_probs=87.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCC---------------CCceEEEEeeeCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYG   83 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~leL~~~~~   83 (161)
                      +.-..+.|++ +|.|+        +++|+.+.-+..++.-.|.++|+++...               ..+..+||+++++
T Consensus        18 ~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~G   97 (170)
T KOG2944|consen   18 TPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWG   97 (170)
T ss_pred             CchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCC
Confidence            3446778888 88888        7788887766665544455555554311               1245699999988


Q ss_pred             Ccc-----ccc----CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           84 VTE-----YTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        84 ~~~-----~~~----g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ...     +..    +.|++||||+|+|++++|++|    +++||++...|.+  +.+..++|+.|||||+|||....
T Consensus        98 tes~~~~~~~ngN~~prGfgHIci~V~di~sac~~l----kekGV~f~Kk~~d--Gk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen   98 TESPPDQAYLNGNKEPRGFGHICIEVDDINSACERL----KEKGVRFKKKLKD--GKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             CCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHH----HHhCceeeecCCC--ccccceeEEECCCCCeEEEeecC
Confidence            542     222    238999999999999999999    6999998877754  22246899999999999998753

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=2.7e-16  Score=110.02  Aligned_cols=110  Identities=17%  Similarity=0.243  Sum_probs=77.6

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc---cccCCCeeEEEEE
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVAIS   99 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~---~~~g~g~~Hiaf~   99 (161)
                      +++|++ .|+|+        ++|||++..+...+..++..+|+..++   ...++|+.......   .....++.||||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            579999 99999        999999865543333334556776542   45688863222111   1123478999999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      |+|   +++++++|    +++|+++..+|...+++ .+.+||+|||||+|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGDG-YYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCCC-eEEEEEECCCCCEEEeC
Confidence            964   78888888    69999999877655443 45688999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.71  E-value=3.5e-16  Score=110.73  Aligned_cols=113  Identities=18%  Similarity=0.131  Sum_probs=76.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCc---ccccCCCeeE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQ   95 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~---~~~~g~g~~H   95 (161)
                      ...+++||+ .|+|+        ++|||++..+...+. +.|.. .+...   +...++|+......   ......++.|
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN---GQYVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC---CCcEEEEEEecCCCCCCCCCCCCceeE
Confidence            456799999 99999        999999865422211 22322 12222   24678885322111   1122356889


Q ss_pred             EEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           96 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        96 iaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      |||.|+|+++++++|    +++|+++...+....++ .+++||+|||||.|||++
T Consensus        79 i~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         79 LAFSVDDIDAAVAHL----ESHNVKCEAIRVDPYTQ-KRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEEeCCHHHHHHHH----HHcCCeeeccccCCCCC-CEEEEEECCCCCEEEEEe
Confidence            999999999999999    69999987443322232 578999999999999987

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.70  E-value=4.8e-16  Score=115.74  Aligned_cols=115  Identities=18%  Similarity=0.131  Sum_probs=79.8

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEe----C--------------CCCcEEEEEeeccCCCCceEEEEeeeCC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVD----K--------------PEYKYTLAMLGYAEEDQTTVLELTYNYG   83 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~----~--------------~~g~~~~~~l~~~~~~~~~~leL~~~~~   83 (161)
                      .+++||+ .|+|+        ++|||++..+..    .              ....+.++++..++   ...|||+...+
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            5799999 99999        899998864311    0              01225667777543   45699975433


Q ss_pred             Ccc-c----ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC-ccc-CC-CceEEEEEECCCCCEEEEEecC
Q 031367           84 VTE-Y----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GSI-PG-LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        84 ~~~-~----~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p-~~~-~~-~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ... .    ..+.|..||||.|+|+++++++|    +++|+++..++ ... ++ ...+.+||+|||||+|||+++.
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            211 1    12357899999999999999999    59998765432 211 11 1247899999999999999974

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.66  E-value=4.6e-15  Score=108.24  Aligned_cols=110  Identities=12%  Similarity=0.124  Sum_probs=75.2

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCc-EEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYK-YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ...+++||+ .|+|+        ++|||++..+...+++. ...+|+..+.  ....+.+.  ..     .+++++|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~--~~h~~~~~--~~-----~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN--KPHDIAFV--GG-----PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC--CcceEEEe--cC-----CCCCceEEEE
Confidence            457899999 99999        99999987665333332 2234554332  12233332  11     1246899999


Q ss_pred             EeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|+|+++   ++++|    +++|+++...|.....+..+.+||+|||||+|||+..
T Consensus        74 ~v~d~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          74 FLESWEDVLKAGDII----SMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EcCCHHHHHHHHHHH----HHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999876   45566    6999998877754332235789999999999999763

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.66  E-value=1.3e-15  Score=107.23  Aligned_cols=110  Identities=21%  Similarity=0.311  Sum_probs=79.7

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-c---c--ccCCCeeEE
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-E---Y--TKGNAYAQV   96 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~---~--~~g~g~~Hi   96 (161)
                      +++|+. .|+|+        ++|||+...........+..+++..+    ...++|+...... .   +  ..+.+..||
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            589999 99999        89999997665444434566676654    3568886432211 1   1  123577899


Q ss_pred             EEEeCCHHHHHHHHhHHHHhcCCeeecC-CcccCCCceEEEEE--ECCCCCEEEEEe
Q 031367           97 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVD  150 (161)
Q Consensus        97 af~V~Di~~~~~~L~~~~~~~Gv~i~~~-p~~~~~~~~~~~f~--~DPDG~~IEl~~  150 (161)
                      ||.|+|+++++++|    +++|+++..+ |...+++ .+.+|+  +||||+.|||+|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~g-~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAGG-KPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCCC-CEEEEecccccCcEEEEecC
Confidence            99999999999999    5999998864 5554443 466777  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=5.3e-15  Score=103.08  Aligned_cols=111  Identities=23%  Similarity=0.310  Sum_probs=77.4

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCc---ccccCCCeeEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA   97 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~---~~~~g~g~~Hia   97 (161)
                      .+++|++ .|+|+        ++|||++..+....+ ..+.+ .+..++   ...++|.......   ....+.+..|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            5799999 99999        899999976643322 23432 233221   3567775322211   112235788999


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           98 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      |.|+|+++++++|    +++|+++...|....+ ..+.+|++||+||.|||+|
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            9999999999999    5999998876543333 2568999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.65  E-value=5.2e-15  Score=107.03  Aligned_cols=109  Identities=21%  Similarity=0.211  Sum_probs=78.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |+.+++|++ .|+|+        ++|||++..+..      ..+++..+    ...+.|.............++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEE
Confidence            567899999 99999        999999875531      12455543    245555322111111123467899999


Q ss_pred             eC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++  |+++++++|    +++|+++..+|...++ ..+.+||+|||||+|||.+..
T Consensus        71 v~~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            98  899999999    6999998877665444 368999999999999999863

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.65  E-value=1.9e-15  Score=111.39  Aligned_cols=115  Identities=16%  Similarity=0.155  Sum_probs=77.8

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCC-CCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      +|+||+ .|+|+        ++|||++..+...+ .+....+|+..++.  ...++. +...... ..+++++||||.|+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~l~~-~~~~g~~Hiaf~v~   76 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRG--EEYVDH-HTLALAQ-GPESGVHHAAFEVH   76 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCC--CCcccc-hHHHHhc-CCCCceeEEEEEcC
Confidence            589999 99999        99999987665443 23344566665321  111111 0000000 11357899999999


Q ss_pred             CHHHHH---HHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367          102 DVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus       102 Di~~~~---~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |++++.   ++|    +++|+++.++|.....+...++||+|||||.|||+.....
T Consensus        77 die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~  128 (153)
T cd07257          77 DFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDL  128 (153)
T ss_pred             CHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCcee
Confidence            999875   777    6999999887765443435678999999999999976543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.64  E-value=7.3e-15  Score=103.31  Aligned_cols=107  Identities=19%  Similarity=0.135  Sum_probs=74.0

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +++++|++ .|+|+        ++|||++..+..  .+.   +|+..........+.|.  ..     ...++.|+||.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~---~~~~~~~~~~~~~~~l~--~~-----~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QGR---VYLKAWDEFDHHSIVLR--EA-----DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cce---EEEEccCCCcccEEEec--cC-----CCCCeeEEEEEe
Confidence            47899999 99999        999999876532  111   23432111123344442  11     124678999999


Q ss_pred             C---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          101 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       101 ~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .   |+++++++|    +++|+++...|.....+.++.+||+|||||+|||.+..
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            8   678888888    69999988766433333357899999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.64  E-value=1.1e-14  Score=104.54  Aligned_cols=109  Identities=20%  Similarity=0.166  Sum_probs=76.8

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      .+++|++ .|+|+        ++|||++..+...     ..+|+..++......+.|... . .   ...+++||||.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~-~-~---~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKT-P-A---PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecC-C-C---CCCcceEEEEEeC
Confidence            5799999 99999        9999998766431     124565432123455666321 1 1   1357899999999


Q ss_pred             CHHHHH---HHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          102 DVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       102 Di~~~~---~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |++++.   ++|    +++|+++...|...+.+..+++||+||||++|||.....
T Consensus        72 d~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHM----LRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHH----HHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            988665   366    699999887665444433567999999999999997644

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.62  E-value=2e-14  Score=106.01  Aligned_cols=115  Identities=16%  Similarity=0.131  Sum_probs=81.0

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCC---CCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~---~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~H   95 (161)
                      +..++|+||+ .|+|+        ++|||++..+....   ++...++|+..++  .+..+.+...      ..+.+++|
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~H   76 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHH   76 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEE
Confidence            4568899999 99999        99999987654332   1134456665432  2334555311      12357899


Q ss_pred             EEEEeCCHH---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           96 VAISTDDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        96 iaf~V~Di~---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |||.|+|.+   +++++|    +++|+++..+|...+.+..+.+|++||||++|||......
T Consensus        77 iaf~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  134 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRT  134 (154)
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceE
Confidence            999998765   567777    6999999877765444446789999999999999887543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.61  E-value=3.3e-14  Score=98.45  Aligned_cols=105  Identities=23%  Similarity=0.201  Sum_probs=75.2

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCH
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  103 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di  103 (161)
                      ++|++ .|+|+        ++|||++..... +.+.+  +++..++   ...+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            47999 99999        899999976543 22334  3444332   2344453222111  1223456999999999


Q ss_pred             HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          104 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       104 ~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      ++++++|    +++|+++..+|...+++ ++.+||+|||||.|||++
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~~-~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCCc-EEEEEEECCCCCEEEeEC
Confidence            9999999    69999999888876643 689999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.60  E-value=5.4e-14  Score=104.44  Aligned_cols=110  Identities=19%  Similarity=0.220  Sum_probs=72.3

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +++|+||+ .|+|+        ++|||++......+.+.....|+...+  ....+.+..  +     .+.++.|+||.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~--~-----~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG--G-----NGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec--C-----CCCceeEEEEEc
Confidence            47899999 99999        999999875543333333345554322  123344421  1     234688999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCee--ecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          101 DD---VYKSAEVVNLVTQELGGKI--TRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i--~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +|   +++++++|    +++|+.+  ...|...+....+++||+|||||.|||++..
T Consensus        72 ~~~~~v~~~~~~L----~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHNIIRTCDLL----AAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHHHHHHHHHH----HHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            87   56666677    6999863  3344322212246799999999999999754

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.59  E-value=5.1e-14  Score=100.93  Aligned_cols=111  Identities=14%  Similarity=0.139  Sum_probs=74.0

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcE-EEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~-~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |+.+++|++ .|+|+        ++|||++..+........ ...++..+    ...++|. .....   ..++..||||
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~-~~~~~---~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIM-EGDSL---QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEe-cCCCC---CCCCceEEEE
Confidence            467899999 99999        999998876642211000 00122222    2456664 21111   2235789999


Q ss_pred             EeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+  |+++++++|    +++|+++.. |....++.++.+||+|||||.|||.+..
T Consensus        73 ~v~~~~ld~~~~~l----~~~gv~~~~-~~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERI----KALGVEMKP-PRPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHH----HHCCCEEec-CCccccCCceEEEEECCCCCEEEEecCC
Confidence            998  688888888    699998764 3333333468999999999999999764

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.58  E-value=9.3e-15  Score=101.93  Aligned_cols=109  Identities=22%  Similarity=0.232  Sum_probs=73.1

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeC--CCCcEEEEEeeccCCCCceEEEEeeeCCCcccccC-----CCeeE
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDK--PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG-----NAYAQ   95 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~--~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g-----~g~~H   95 (161)
                      +|+||+ .|+|+        ++|||++......  ..+....+++..+    ...++|...........+     .+..|
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   76 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG----EGHIELFLNPSPPPRASGHSFPEHGGHH   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST----SSCEEEEEEESSSSSSEEEHHHSHTSEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc----ccceeeeeecccccccccccccccccee
Confidence            589999 99999        9999999888762  2223344455533    234556544332211111     12356


Q ss_pred             EEEEeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEE
Q 031367           96 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  148 (161)
Q Consensus        96 iaf~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl  148 (161)
                      +++.+.   |+++++++|    ++.|+++..+|.....+....+||+|||||.|||
T Consensus        77 i~~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   77 IAFLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEEEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEEEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            666666   566777777    6999999988876655545567899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=3.6e-14  Score=99.57  Aligned_cols=105  Identities=11%  Similarity=0.213  Sum_probs=72.4

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeC----CCcccccCCCeeEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY----GVTEYTKGNAYAQVA   97 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~----~~~~~~~g~g~~Hia   97 (161)
                      +++.|+. .|+|+        ++|||++..+.  .  .+ .. +..     ...+.+...+    .......+++..||+
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~-~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--G--EN-VT-FEG-----GFALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeecc--C--ce-EE-Eec-----cceeccchhhhccCCcccccccCCceEEE
Confidence            4689999 99999        89999986432  1  12 11 221     1222221100    011112233457999


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCC-eeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           98 ISTDDVYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv-~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |.|+|+++++++|    +++|+ ++..+|...+++ .+.+||+|||||+|||.++
T Consensus        70 ~~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKL----KRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHH----HhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            9999999999999    58875 788888887775 6899999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.57  E-value=1.4e-13  Score=110.65  Aligned_cols=113  Identities=24%  Similarity=0.328  Sum_probs=76.9

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +.+++++||+ .|+|+        ++|||++..+.....+.+...|+....  ....+.+. . .     .+.+++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~-~-----~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG--GVHDIALT-N-G-----NGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC--CcCceEee-c-C-----CCCceeeEEE
Confidence            4568999999 99999        899999876654444444445554322  12234442 1 1     2357899999


Q ss_pred             EeCCHH---HHHHHHhHHHHhcCCe--eecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 STDDVY---KSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V~Di~---~~~~~L~~~~~~~Gv~--i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|+|.+   +.+++|    +++|++  +...|...+.+..+++|++|||||+|||++...
T Consensus       203 ~v~d~~~v~~~~~~l----~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       203 WVHDPLNIIKACDIL----ASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             EcCCHHHHHHHHHHH----HhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            999954   445666    699998  666665433333467999999999999998643

The enzyme from Bacillus brevis contains manganese.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=6.5e-14  Score=97.52  Aligned_cols=109  Identities=20%  Similarity=0.252  Sum_probs=76.3

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC---cccccCCCeeEEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI   98 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~---~~~~~g~g~~Hiaf   98 (161)
                      .+++|+. .|+|+        ++|||++..+....  .+  +++..++    ..++|......   .....+.+..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeCC----EEEEEecCCCccCcCccCCCCCCceEEE
Confidence            5799999 99999        89999997764321  12  2333332    45666422211   11123356789999


Q ss_pred             EeCC-HHHHHHHHhHHHHhcCCeeecCCcccCC--CceEEEEEECCCCCEEEEEec
Q 031367           99 STDD-VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~D-i~~~~~~L~~~~~~~Gv~i~~~p~~~~~--~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .+++ +++++++|    +++|+++...|....+  +.++.+||+|||||+|||++.
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            9985 99999999    5999999877764422  225789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.57  E-value=3.4e-14  Score=101.89  Aligned_cols=105  Identities=23%  Similarity=0.236  Sum_probs=72.6

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC-
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-  102 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D-  102 (161)
                      |+||+ .|+|+        ++|||++....+    ..  +++..+    ...+++.............+..||||.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----KT--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----cc--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            68999 99999        899999865421    11  234443    245666322221111122467899999984 


Q ss_pred             -HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          103 -VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       103 -i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                       +++++++|    +++|+++..+|....+ ..+.+||+|||||+|||++..
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence             88888998    6999998765543333 257899999999999999975

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.57  E-value=9.4e-14  Score=98.07  Aligned_cols=105  Identities=13%  Similarity=0.163  Sum_probs=74.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |.++++|++ .|+|+        ++|||+.....    +.+.  ++..++   ...+++. .. .    ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~--~~~~~~---~~~l~~~-~~-~----~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFA--VVKLDN---GVSLDFA-QP-D----GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEE--EEEcCC---CcEEEEe-cC-C----CCCCcceEEEE
Confidence            457899999 99999        89999987632    2232  233222   3556663 21 1    11245799999


Q ss_pred             eC--CHHHHHHHHhHHHHhcCCeeecCCcccC------CCceEEEEEECCCCCEEEEEecC
Q 031367          100 TD--DVYKSAEVVNLVTQELGGKITRQPGSIP------GLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~------~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |+  |+++++++|    +++|+++..+|....      ....+.+||+|||||+|||++++
T Consensus        66 v~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          66 VSEEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             eCHHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            97  589999999    699999987776431      12368999999999999999873

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.57  E-value=1.7e-13  Score=102.43  Aligned_cols=114  Identities=18%  Similarity=0.161  Sum_probs=77.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +.+.+|+|++ .|+|+        ++|||++..+.....+.....|+....  ....+.+.  ....  ...++++||||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~--~~~~--~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYT--RDPA--GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEe--cCCC--CCCCCceEEEE
Confidence            4567899999 99999        899999876654443333345665432  12334342  1111  12246789999


Q ss_pred             EeCCHH---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~Di~---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|+|.+   +++++|    +++|+++..+|...+......+||+|||||+|||++.
T Consensus        76 ~v~~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            999654   667777    6999998777765433223468999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PRK06724 hypothetical protein; Provisional

Probab=99.57  E-value=9.6e-14  Score=99.75  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=70.7

Q ss_pred             CCCcceeEEE-eeCCc--------c---ccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------Q---ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~---vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~H   95 (161)
                      .|..+++||+ +|+|+        +   .|||+......+..+.              ..+.|. ..... .....+..|
T Consensus         3 ~~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~--------------~~l~l~-~~~~~-~~~~~g~~h   66 (128)
T PRK06724          3 TLRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTGE--------------SEIYFK-EVDEE-IVRTLGPRH   66 (128)
T ss_pred             ccCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCCC--------------eeEEEe-cCCcc-ccCCCCcee
Confidence            3678899999 99999        5   5577764322111111              223231 11110 112235789


Q ss_pred             EEEEe---CCHHHHHHHHhHHHHhcCCeeecCCcccCC--CceEEEEEECCCCCEEEEEecCC
Q 031367           96 VAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        96 iaf~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~--~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +||.|   +|+++++++|    +++|+++..+|...+.  ...+.+||+|||||.|||+..+.
T Consensus        67 ~af~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~~  125 (128)
T PRK06724         67 ICYQAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTPN  125 (128)
T ss_pred             EEEecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCCC
Confidence            99998   6788888888    6999999888865442  22478899999999999988743

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.2e-13  Score=95.27  Aligned_cols=108  Identities=21%  Similarity=0.281  Sum_probs=75.6

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc--cccCCCeeEEEEEeCCH
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDDV  103 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~--~~~g~g~~Hiaf~V~Di  103 (161)
                      ||+ .|+|+        ++|||++..+..... ...++++..++. ....++|........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            889 99999        899999987754222 233444553321 134566642222111  12234677999999999


Q ss_pred             HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          104 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       104 ~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      ++++++|    +++|+++..+|...++  ++.+||+|||||+|||++
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            9999999    5999999988754333  588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.56  E-value=2.2e-13  Score=97.22  Aligned_cols=107  Identities=23%  Similarity=0.253  Sum_probs=76.7

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHH
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  104 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~  104 (161)
                      +||+ .|+|+        ++|||++......+ +....+|+..++  ....+.+...  .    ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~--~----~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPG--P----ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcC--C----CCCCeeEEEEEcCCHH
Confidence            5999 99999        89999997765433 333445666443  2334555321  1    1356889999999875


Q ss_pred             ---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          105 ---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       105 ---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                         +++++|    +++|+++..+|...+.+..+.+||+|||||+|||.+...
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               566777    699999988776544444578899999999999998754

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=3e-13  Score=94.88  Aligned_cols=104  Identities=18%  Similarity=0.133  Sum_probs=74.6

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCccc----ccCCCeeEEEEEeCCHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY----TKGNAYAQVAISTDDVYK  105 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~----~~g~g~~Hiaf~V~Di~~  105 (161)
                      .|+|+        ++|||++......+.+.+..+.+..++    ..+.|.........    ....+..|++|.|+|+++
T Consensus         6 ~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           6 RYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD----GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             EECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC----EEEEEecCCCcccccccccCCCceEEEEEEECCHHH
Confidence            67788        899999988765444444444455432    34555322221111    122345799999999999


Q ss_pred             HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          106 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       106 ~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      +++++    +++|+++..+|...+++ .+.++|+|||||+|+|.+
T Consensus        82 ~~~~l----~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          82 HYERA----RAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHH----HHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            99999    59999999998887775 678899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.55  E-value=2.4e-13  Score=109.94  Aligned_cols=110  Identities=17%  Similarity=0.199  Sum_probs=74.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcE-EEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~-~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      .+.+|+||+ .|+|+        ++|||++..+...+.+.. ..+|+..+.  ....+.+. . .    +..++++||||
T Consensus       142 ~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~-~----~~~g~~~Hiaf  213 (303)
T TIGR03211       142 GARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN--KAHDIAFV-G-D----PEPGKLHHVSF  213 (303)
T ss_pred             CceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC--CCccccee-c-C----CCCCceEEEEE
Confidence            467899999 99999        999999876654443332 344665332  12223221 1 1    11224899999


Q ss_pred             EeCCH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           99 STDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        99 ~V~Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .|+|.   ++++++|    +++|+++..+|...+....+.+||+|||||+|||+.
T Consensus       214 ~v~~~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       214 FLDSWEDVLKAADVM----SKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EcCCHHHHHHHHHHH----HhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            99975   4456667    699999988776443323578999999999999984

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.55  E-value=1.9e-13  Score=95.41  Aligned_cols=110  Identities=17%  Similarity=0.205  Sum_probs=73.1

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCcc--cccCCCeeEEEE
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAI   98 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~~--~~~g~g~~Hiaf   98 (161)
                      +++||+ .|+|+        ++|||++..+....++  ... .++..........|+|........  .....+..|+||
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f   79 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYH-LFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAF   79 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEE-EEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEE
Confidence            478999 99999        8999999877543221  222 333322111345688853322211  112245789999


Q ss_pred             EeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367           99 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus        99 ~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      .|+|   ++++++++    +++|+++...+..  . ..+.+||+|||||+|||+
T Consensus        80 ~v~~~~~~~~~~~~~----~~~g~~~~~~~~~--~-~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          80 SVPSEASLDAWRERL----RAAGVPVSGVVDH--F-GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EcCCHHHHHHHHHHH----HHcCCcccceEee--c-ceEEEEEECCCCCEEEeC
Confidence            9995   57788888    6999998754432  2 368899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.55  E-value=1.2e-13  Score=96.93  Aligned_cols=110  Identities=19%  Similarity=0.276  Sum_probs=77.9

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCC-CCcEEEEEeeccCCCCceEEEEeeeCCCc-c-----cccCCCeeEE
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVT-E-----YTKGNAYAQV   96 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~-----~~~g~g~~Hi   96 (161)
                      ++||+ .|+|+        ++|||+........ .+.+..+++..+    ...++|....... .     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            58999 99999        88999997765443 234555677643    4667776432211 1     1234678899


Q ss_pred             EEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC--CCEEEEEe
Q 031367           97 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVD  150 (161)
Q Consensus        97 af~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD--G~~IEl~~  150 (161)
                      +|.|+|++++++++    +++|+++..+|...+.+..+.+|+.|||  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999    6999999987763333323455556666  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.54  E-value=1.9e-13  Score=101.38  Aligned_cols=108  Identities=15%  Similarity=0.118  Sum_probs=74.4

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-cccCCCeeEEEEEeC
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTD  101 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~~~g~g~~Hiaf~V~  101 (161)
                      +++||+ .|+|+        ++|||++..+..   +.+  .|...+. ..+..|+|........ .....++.||||.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~--~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DRV--RLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CEE--EEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            479999 99999        899999987653   122  3333221 1246788854321111 112246889999999


Q ss_pred             C---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          102 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       102 D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |   +++++++|    +++|+++. ++...  +..+.+||+|||||.|||++..
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~-~~~~~--~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVS-GIVDR--FYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCcc-ccccc--ccEEEEEEECCCCcEEEEEECC
Confidence            8   78888888    69999864 33322  2257899999999999999975

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.54  E-value=2.6e-13  Score=95.35  Aligned_cols=105  Identities=17%  Similarity=0.135  Sum_probs=71.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      .+.+++|+. .|+|+        ++|||++..+..    ..  +|+...+......+.+...       ...+..|+||.
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~--~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~   69 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----QS--VYLRAWGDYEHHSLKLTES-------PEAGLGHIAWR   69 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----Ce--EEEEeccCCCccEEEEeeC-------CCCceEEEEEE
Confidence            457899999 99999        999999876632    12  3454322112344555311       12468899999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |++   +++++++|    +++|+++...+....  .++.+||+|||||+|||+...
T Consensus        70 v~~~~~v~~~~~~l----~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          70 ASSPEALERRVAAL----EASGLGIGWIEGDPG--HGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             cCCHHHHHHHHHHH----HHcCCccccccCCCC--CcceEEEECCCCCEEEEEEec
Confidence            984   66777777    699998754333222  246789999999999998753

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.54  E-value=2.6e-13  Score=98.99  Aligned_cols=107  Identities=14%  Similarity=0.232  Sum_probs=74.6

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHH
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  104 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~  104 (161)
                      .||. .|+|+        ++|||++..+...     ..+|+...+......+.+.  .     ....+++||||.|+|.+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~--~-----~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG--P-----ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec--c-----CCCCceEEEEEECCCHH
Confidence            4899 99999        9999998766421     2356653321112233221  1     12357999999998764


Q ss_pred             ---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchh
Q 031367          105 ---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  156 (161)
Q Consensus       105 ---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~  156 (161)
                         +++++|    +++|+++..+|...+.+..+++||+||||+.|||.......+
T Consensus        69 ~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          69 DIGKALYRI----KAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             HHHHHHHHH----HHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence               556777    699999988887655444678999999999999998765443

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.53  E-value=1.7e-13  Score=95.94  Aligned_cols=107  Identities=22%  Similarity=0.157  Sum_probs=73.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      +..++.|+. .|+|+        ++|||++.....    .+  +|+..........+.+. . .     ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~~~~~~~~~-~-~-----~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEFIHHSLVLT-K-A-----PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCCceEEEEEe-e-C-----CCCceeEEEEE
Confidence            357899999 99999        899999865421    22  34432111123334442 1 1     12467899999


Q ss_pred             eC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |.   |+++++++|    +++|+++...|....++..+.+|+.|||||+|||+...
T Consensus        68 v~~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            95   678888888    69999987765433333357899999999999999754

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=4.3e-13  Score=94.65  Aligned_cols=108  Identities=20%  Similarity=0.188  Sum_probs=75.1

Q ss_pred             ceeEEE-eeCCc--------ccc---CCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc---cccCCCeeEE
Q 031367           32 PLNDVV-FVGSL--------QAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQV   96 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vL---G~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~---~~~g~g~~Hi   96 (161)
                      +|+||. .|+|+        ++|   ||++..+...   ..  .|....   ++..++|.......+   ...++++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~~--~~~~~~---~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---GR--SWRAGD---GGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---Cc--eEEecC---CceEEEEEecccCCCcccccCCcCeeEE
Confidence            589999 99999        889   9999876521   11  222221   246677753322111   1233578899


Q ss_pred             EEEeCC---HHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEec
Q 031367           97 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        97 af~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ||.|+|   +++++++|    +++|+++...|...  .....+.+||+|||||+|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999985   78888888    69999999877642  12236789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.53  E-value=5.2e-14  Score=109.38  Aligned_cols=111  Identities=41%  Similarity=0.641  Sum_probs=93.0

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-----------CcEEEEEeeccCCCCceEEEEeeeCCCcccc
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYT   88 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----------g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~   88 (161)
                      +..+.-|+- .|.|.        ++|||++++..+++.           ++|+-.|+++++++.++++||++|++...|.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            345677888 99998        999999999988876           7899999999999999999999999999899


Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|++|.||++.++|+-+.++.+.    ..|.        ... ....+|++|||||.++|.++.
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~----~p~~--------~~~-g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVN----APGG--------KGS-GCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhc----CcCC--------ccc-ceEEEEEECCCCcEEEEeccC
Confidence            99999999999999987777773    3222        112 145789999999999999753

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.53  E-value=5.2e-14  Score=109.37  Aligned_cols=140  Identities=37%  Similarity=0.571  Sum_probs=100.2

Q ss_pred             CCceEE--EEecCCce---eecCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceE
Q 031367           10 NSGSIV--VVIKSAYS---LLFNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV   75 (161)
Q Consensus        10 ~~~~~~--~~~~~~~~---~~~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~   75 (161)
                      ++|..+  +..||+|+   ++|.+....+..|. +|.||        +.|||++....+    ++..+.|++++  +++.
T Consensus       122 ~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee----k~t~~~mgYgd--~q~~  195 (299)
T KOG2943|consen  122 GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE----KYTRARMGYGD--EQCV  195 (299)
T ss_pred             ccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEehhHHHHHHHHHHHhCcchhhhhh----hhhhhhhccCC--cceE
Confidence            344444  45577775   67888889999999 99999        999999987633    24557899987  4799


Q ss_pred             EEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcc--cCCC-ceEEEEEECCCCCEEEEEecC
Q 031367           76 LELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS--IPGL-NTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        76 leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~--~~~~-~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |||+++++...+..+.+...||+-.+|+..+.+.+    |..|.++..+...  .|.+ ...++-+.||||+.|+|+..+
T Consensus       196 LElt~~~~~id~~kg~griafaip~d~~~~l~e~i----K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  196 LELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI----KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             EEEEeccCcccccccceeEEEeccccccccHHHHH----HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            99998887665555544444444444666666666    6776666654432  2332 246777999999999999999


Q ss_pred             Cchhhhc
Q 031367          153 DFLKEIQ  159 (161)
Q Consensus       153 ~~~~~~~  159 (161)
                      .|+++.+
T Consensus       272 ~F~~lsk  278 (299)
T KOG2943|consen  272 GFRKLSK  278 (299)
T ss_pred             HHHHHhc
Confidence            9988754

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.52  E-value=4.7e-13  Score=97.80  Aligned_cols=104  Identities=16%  Similarity=0.265  Sum_probs=73.6

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      .+++|+. .|+|+        ++|||++.....    . ...|+..+.  ....+.|. . .     ..+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~----~-~~~~l~~~~--~~~~~~l~-~-~-----~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG----D-QMAFLRCNS--DHHSIAIA-R-G-----PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC----C-eEEEEECCC--CcceEEEc-c-C-----CCCceEEEEEECC
Confidence            5799999 99999        999999864421    1 124565443  23445552 1 1     1246789999999


Q ss_pred             CHHHHH---HHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          102 DVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       102 Di~~~~---~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |++++.   ++|    +++|+++..+|.....+..+.+||+|||||.|||++..
T Consensus        69 d~~~l~~~~~~l----~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          69 SIDEVMRGIGRM----IDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CHHHHHHHHHHH----HHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            987654   566    69999988776543333356789999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=1.4e-13  Score=93.78  Aligned_cols=104  Identities=19%  Similarity=0.087  Sum_probs=73.1

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-cccCCCeeEEEEEeCC
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD  102 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~~~g~g~~Hiaf~V~D  102 (161)
                      |+|++ .|+|+        +.|||+...+.....   ..+|+..++   ...++|........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            68999 99999        899999876543221   123454433   23577753322211 1123467899999999


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEE
Q 031367          103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  148 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl  148 (161)
                      ++++++++    +++|+++..++.. .+ ..+.+||+|||||+|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~-~~-~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVP-GD-GVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCC-CC-CccEEEEECCCCCEEeC
Confidence            99999999    6999999877654 22 25789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=1e-12  Score=91.49  Aligned_cols=105  Identities=16%  Similarity=0.155  Sum_probs=75.5

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc--ccccCCCeeEEEEEeCCHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EYTKGNAYAQVAISTDDVYKSA  107 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~--~~~~g~g~~Hiaf~V~Di~~~~  107 (161)
                      +|+|+        ++||+++......+.+.+..+++..++    ..+.+.......  ....+.+..|++|.|+|+++++
T Consensus         8 ~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~   83 (122)
T cd07246           8 IVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDATF   83 (122)
T ss_pred             EECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHHHHH
Confidence            78888        899999988765455555445555432    456664211110  0012334579999999999999


Q ss_pred             HHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          108 EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       108 ~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +++    +++|+++..+|...+++ .+.++|+|||||+|||.+.
T Consensus        84 ~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          84 ARA----VAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHH----HHCCCeEecCccccccc-ceEEEEECCCCCEEEEecC
Confidence            999    58999999888766664 6899999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.52  E-value=2.1e-13  Score=96.78  Aligned_cols=105  Identities=17%  Similarity=0.183  Sum_probs=73.8

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      +..+|.||. .|+|+        ++|||++..+..    .  .+|+..++  .+..+.|. . +     . .+..|+||.
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~--~~~~i~l~-~-~-----~-~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA----K--ATYFRSDA--RDHTLVYI-E-G-----D-PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----C--eEEEEcCC--ccEEEEEE-e-C-----C-CceEEEEEE
Confidence            457899999 99999        999999865521    1  24555432  23445442 2 1     1 345799999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccC--CCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~--~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+|   +++++++|    +++|+++...+....  ++..+++||+|||||+|||+..+.
T Consensus        67 v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          67 LRDDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             ECCHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence            986   88888888    699999876553211  222467899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=1e-12  Score=92.25  Aligned_cols=108  Identities=19%  Similarity=0.225  Sum_probs=74.2

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-ccccCCCeeEEEEEe
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAIST  100 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~~~~g~g~~Hiaf~V  100 (161)
                      ++|+|+. .|+|+        ++|||++.....    .  .+++..++  ....|.|....... ......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~--~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----S--TAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----C--EEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            5799999 99999        899999976621    2  24555432  24556664322211 112234688999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++   +++++++|    +++|+++.. +...+  ..+.+||+|||||+|||.+..+
T Consensus        73 ~~~~~v~~~~~~l----~~~g~~~~~-~~~~~--~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRL----IELGIPLVG-ASDHL--VSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHH----HHcCCceec-ccccc--ceeEEEEECCCCCEEEEEEecC
Confidence            85   77788888    699998754 33222  2478999999999999998644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.50  E-value=5.3e-13  Score=93.89  Aligned_cols=103  Identities=16%  Similarity=0.189  Sum_probs=71.5

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  102 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D  102 (161)
                      ++.||+ .|+|+        ++|||++..+...   .  .+|+..++  .+..+.|. . .     ...+..|++|.|++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~---~--~~~~~~~~--~~~~~~l~-~-~-----~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED---G--ALYLRMDD--RAWRIAVH-P-G-----EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC---C--eEEEEccC--CceEEEEE-e-C-----CCCceeEEEEEECC
Confidence            689999 99999        9999998655321   1  13444332  24445553 1 1     12467899999975


Q ss_pred             ---HHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEecC
Q 031367          103 ---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       103 ---i~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                         +++++++|    +++|+++...|...  ..+..+.+||+|||||+|||+...
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               77888888    69999998755321  222347899999999999998753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.50  E-value=1.2e-12  Score=93.36  Aligned_cols=111  Identities=20%  Similarity=0.193  Sum_probs=75.1

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  102 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D  102 (161)
                      +|+|+. .|+|+        ++|||++..+.+.  ..  .+|+..+. .....+.+............+++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GG--LVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--Cc--EEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999 99999        8999998766432  12  34555431 12355666433222111223578899999998


Q ss_pred             HH---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367          103 VY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus       103 i~---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ++   +++++|    +++|+++...+..   +..+.+||+|||||+|||++....
T Consensus        76 ~~~v~~~~~~l----~~~G~~~~~~~~~---~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERL----RAAGITPVWPVDH---GNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHH----HHCCCCccccCCC---CceeEEEEECCCCCEEEEEEcCCC
Confidence            65   466777    6899998765421   225789999999999999987543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=6.9e-13  Score=92.97  Aligned_cols=105  Identities=19%  Similarity=0.233  Sum_probs=71.3

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeC--------C---CcccccCCC
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--------G---VTEYTKGNA   92 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~--------~---~~~~~~g~g   92 (161)
                      +.|+. .|+|+        ++|||++.....  .+.|.  .+..+    ...+.+....        .   ......+.+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYG--ELETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEE--EecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            46999 99999        999999865432  11222  12211    1222221100        0   000112233


Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                       .|++|.|+|++++++++    +++|+++..+|...+++ .+.++|+|||||.|||.++
T Consensus        73 -~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 -FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             -EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence             59999999999999999    59999999888887775 5788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.49  E-value=1.3e-12  Score=90.50  Aligned_cols=102  Identities=22%  Similarity=0.225  Sum_probs=73.5

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      ++++|+. .|+|+        ++|||++..+..    ..  +|+..+. .....+.+...       ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GS--VYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----Ce--EEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcC
Confidence            5799999 99999        999999986642    12  3444331 12344555321       1245789999998


Q ss_pred             ---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          102 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       102 ---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                         |+++++++|    +++|+++...|...+++ .+.+||+|||||+||++..
T Consensus        67 ~~~~v~~~~~~l----~~~g~~~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHL----EAAGVAPEEASDPEPGV-GRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCccCCCC-ceEEEEECCCCCEEEEEEc
Confidence               577788888    69999998877544443 5789999999999999875

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=1.9e-12  Score=90.25  Aligned_cols=102  Identities=20%  Similarity=0.153  Sum_probs=71.4

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-----ccccCCCeeEEEEEe
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAYAQVAIST  100 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-----~~~~g~g~~Hiaf~V  100 (161)
                      +.. .|+|+        ++|||++..+..    .+  .++..++  ....|.|.......     ....+.+. |++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WY--VSLRSPD--GGVELAFMLPGHETVPAAQYQFQGQGL-ILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cE--EEEecCC--CceEEEEccCCCCCCcchhcccCCceE-EEEEEE
Confidence            456 88999        899999976521    22  2343322  13556663211111     11123444 999999


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      +|+++++++|    +++|+++..+|...+++ .+.++|+|||||+|||+|
T Consensus        75 ~did~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERL----KAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHH----HhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            9999999999    59999998888877764 688999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=1.8e-12  Score=90.88  Aligned_cols=105  Identities=21%  Similarity=0.177  Sum_probs=69.6

Q ss_pred             eeEEE-eeCCc--------cc---cCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           33 LNDVV-FVGSL--------QA---LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~v---LG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      ++|++ .|+|+        ++   |||++..+.  .+ .+ +.| ..++  +...+.|......... ...+..||||.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~~-~~~-~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-GA-VGY-GKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-ce-eEe-ccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            58999 99999        65   799987653  11 22 223 3221  2455666432221111 222346999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCeeecCCcccCC--CceEEEEEECCCCCEEEEE
Q 031367          101 DD---VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~--~~~~~~f~~DPDG~~IEl~  149 (161)
                      +|   ++++++++    +++|+++..+|...++  ...+.+||+|||||+|||+
T Consensus        73 ~~~~~v~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAA----LAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHH----HHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            97   56667777    6999999888876654  2245799999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.44  E-value=3.7e-12  Score=88.65  Aligned_cols=101  Identities=16%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             cceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC
Q 031367           31 LPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  102 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D  102 (161)
                      .+++|+. .|+|+       ..|||++..+..  +  .  +|+..++  ....+.+. ..+     ..+++.|++|.|+|
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~lGl~~~~~~~--~--~--~~~~~~~--~~~~~~~~-~~~-----~~~~~~~~af~v~~   67 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTDFGLEVAARTD--D--E--LYYRGYG--TDPFVYVA-RKG-----EKARFVGAAFEAAS   67 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHHcCCEEEEecC--C--e--EEEecCC--CccEEEEc-ccC-----CcCcccEEEEEECC
Confidence            5799999 99999       339999876632  1  1  3444221  12222221 111     12467899999999


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .+++.+.+    ++.|+++...+. .+++ .+.+||+|||||.|||+..
T Consensus        68 ~~~~~~~~----~~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          68 RADLEKAA----ALPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHHH----HcCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEec
Confidence            98888877    588998775443 2332 5789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.44  E-value=1.3e-12  Score=91.52  Aligned_cols=105  Identities=17%  Similarity=0.102  Sum_probs=69.1

Q ss_pred             eeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeC-----CCcccccCCCeeEEEEE
Q 031367           33 LNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-----GVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        33 i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~-----~~~~~~~g~g~~Hiaf~   99 (161)
                      ++||+ .|+|+       +.|||++.......  .+  +.+..++   ...+.|....     .....+...+..|++|.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~--~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~   73 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEADDE--PH--VEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAFL   73 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCcCCC--Cc--EEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEEE
Confidence            58999 99999       66999986443211  11  2232221   2334332110     00001122345689998


Q ss_pred             eC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          100 TD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       100 V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      +.   |+++++++|    +++|+++..+|...+++ .+.++|+|||||.|||+
T Consensus        74 ~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          74 CETPAEVDALYAEL----VGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             cCCHHHHHHHHHHH----HHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            76   789999999    69999999888877765 57899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.44  E-value=7.3e-12  Score=100.70  Aligned_cols=108  Identities=17%  Similarity=0.195  Sum_probs=73.0

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCC--C-cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPE--Y-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~--g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      .+|+||+ .|+|+        ++|||++..+...+.  + .+..+|+...+  .+..+.+. ..     +...+++||||
T Consensus       141 ~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~l~-~~-----~~~~~~~Hiaf  212 (286)
T TIGR03213       141 QGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNE--RHHSLAFA-AG-----PSEKRLNHLML  212 (286)
T ss_pred             ccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECC--CcceEEEe-cC-----CCCCceEEEEE
Confidence            4899999 99999        999999876543221  2 12345665432  23334442 11     12347899999


Q ss_pred             EeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|+|+++   ++++|    +++|+ ....|...+.+..+++||+||||++||+...
T Consensus       213 ~v~d~~~v~~~~~~l----~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       213 EVDTLDDVGLALDRV----DADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             EcCCHHHHHHHHHHH----HHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            9998766   67777    69999 5555543333335789999999999999874

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.44  E-value=2.3e-12  Score=90.63  Aligned_cols=100  Identities=28%  Similarity=0.312  Sum_probs=69.7

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe--
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  100 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V--  100 (161)
                      +++|+. .|+|+        ++|||++....+  +  .  .++..+.    ..+.+......   ...++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~~----~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--G--AYLEAGD----LWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--c--eEEecCC----EEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            589999 99999        999999876542  1  1  2343332    33444322211   1234678999999  


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +|+++++++|    +++|+++..++..    ..+.+||+|||||+|||++..
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence            4788888888    6999998755432    146899999999999999863

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.43  E-value=1.7e-12  Score=89.55  Aligned_cols=100  Identities=21%  Similarity=0.292  Sum_probs=66.9

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC--CH
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DV  103 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~--Di  103 (161)
                      ||+ .|+|+        ++|||++..+.+.    .  +++..+    ...+.+.... .... ...+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~----~--~~~~~~----~~~l~~~~~~-~~~~-~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK----E--AYFELA----GLWICLMEED-SLQG-PERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc----e--eEEEec----CeEEEeccCC-CcCC-CCCCccEEEEEcCHHHH
Confidence            899 99999        9999998765421    1  233332    2345443211 1111 2346789999995  68


Q ss_pred             HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          104 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       104 ~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +++++++    +++|+++...+...++ ..+.+|++|||||+|||++.
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            8888888    5999998744322222 25789999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=2.2e-12  Score=90.96  Aligned_cols=104  Identities=21%  Similarity=0.145  Sum_probs=68.7

Q ss_pred             eEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC-----ccc--ccCCCeeEEEE
Q 031367           34 NDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-----TEY--TKGNAYAQVAI   98 (161)
Q Consensus        34 ~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~-----~~~--~~g~g~~Hiaf   98 (161)
                      .+++ .|+|+       +.|||+...+.....  ..  ++..++   ...|.|......     ...  +.+.+..|++|
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~~~~~~~--~~--~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f   74 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNPQFSDEK--AA--CMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLISL   74 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEccccCCCC--eE--EEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEEEE
Confidence            5788 99999       569999875433222  21  122222   345666421110     000  12334569999


Q ss_pred             EeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           99 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        99 ~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .|+   |++++++++    +++|+++..+|...++  .+.+||+|||||+|||+.
T Consensus        75 ~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          75 SADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             eCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            998   477778888    6999999988876654  467899999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.41  E-value=5.7e-12  Score=88.44  Aligned_cols=96  Identities=18%  Similarity=0.122  Sum_probs=66.5

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        + |||++.++...   .|  +++..+    ...|+|.......   ......|++|.|+|+++++++
T Consensus         9 ~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~--~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~~~~~   75 (120)
T cd08350           9 PSRDLDATEAFYAR-LGFSVGYRQAA---GY--MILRRG----DLELHFFAHPDLD---PATSPFGCCLRLPDVAALHAE   75 (120)
T ss_pred             EcCCHHHHHHHHHH-cCCEEEecCCC---CE--EEEEcC----CEEEEEEecCcCC---CCCCcceEEEEeCCHHHHHHH
Confidence            78888        7 99999766432   23  345533    3567775322111   112235899999999999999


Q ss_pred             HhHHHHhcCCeee-------cCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          110 VNLVTQELGGKIT-------RQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       110 L~~~~~~~Gv~i~-------~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |    +++|+++.       .+|...+++ .+.+||+|||||+|||.|.
T Consensus        76 l----~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          76 F----RAAGLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             H----HHhCccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            9    59999853       344444454 6899999999999999885

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.41  E-value=7.3e-12  Score=87.24  Aligned_cols=103  Identities=26%  Similarity=0.324  Sum_probs=71.3

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      .+|+|+. .|+|+        ++|||+...+..    .+  +++..++. ....+.+..  .     ..++..|++|.|+
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~-~~~~~~~~~--~-----~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS-EHHILRLRR--S-----DRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC-ccEEEEecc--C-----CCCCCceEEEEeC
Confidence            5799999 99999        899999865532    22  34443221 123334321  1     1235689999995


Q ss_pred             ---CHHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEecC
Q 031367          102 ---DVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       102 ---Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                         |+++++++|    +++|+++..+|...  +++ .+.+||+|||||.|||++..
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~~-~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPGG-GYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCCC-ceEEEEECCCCCEEEEEecc
Confidence               677888888    69999998776432  332 57899999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=9.2e-12  Score=86.73  Aligned_cols=105  Identities=18%  Similarity=0.226  Sum_probs=70.3

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc------ccccCCCeeEEE
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNAYAQVA   97 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~------~~~~g~g~~Hia   97 (161)
                      +-||. .|+|+        ++|||++..+.   ++.+  +++..++   ...+.|.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~~--~~l~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRRL--AFFWVGG---RGMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCce--EEEEcCC---CcEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            35888 99999        89999998752   2223  3455443   2345443221110      011224678999


Q ss_pred             EEeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           98 ISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        98 f~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |.|+  |++++++++    +++|+++...+. ..+ ..+.+||+|||||+|||++.
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence            9995  788999999    599999876554 222 36789999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=1.1e-11  Score=85.55  Aligned_cols=97  Identities=19%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        ++|||+....    .+ +. .++..++ .....+.+.. ...    .+....|++|.|+|+++++++
T Consensus         7 ~v~Dl~~s~~FY~~~lG~~~~~~----~~-~~-~~~~~~~-~~~~~~~~~~-~~~----~~~~~~~i~~~v~d~~~~~~~   74 (112)
T cd07238           7 PVADPEAAAAFYADVLGLDVVMD----HG-WI-ATFASPQ-NMTVQVSLAT-EGG----TATVVPDLSIEVDDVDAALAR   74 (112)
T ss_pred             ecCCHHHHHHHHHHhcCceEEEc----CC-ce-EEEeecC-CCCcEEEEec-CCC----CCCCCCEEEEEeCCHHHHHHH
Confidence            78888        8899998643    11 22 2333222 1234455532 111    122356999999999999999


Q ss_pred             HhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          110 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       110 L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |    +++|+++..+|...+++ .+.+||+|||||+|||+++
T Consensus        75 l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          75 A----VAAGFAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             H----HhcCCeEecCCccCCCc-eEEEEEECCCCCEEEEEEc
Confidence            9    69999999888766654 5789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.39  E-value=1.1e-11  Score=83.26  Aligned_cols=103  Identities=27%  Similarity=0.323  Sum_probs=73.3

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHH
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  105 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~  105 (161)
                      |+. .|+|+        +.|||++.......  ....+++..+    ...++|....+......+++..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG--GAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC--CEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            788 89999        78999998776432  2344555543    366777543222111124567899999999999


Q ss_pred             HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEE
Q 031367          106 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  148 (161)
Q Consensus       106 ~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl  148 (161)
                      ++++|    +++|+.+..++....+ ..+.+|++||+|++|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPREEPW-GGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcCCCC-CcEEEEEECCCCcEEeC
Confidence            99999    5899998877652222 36899999999999996

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.38  E-value=1.3e-11  Score=84.67  Aligned_cols=99  Identities=22%  Similarity=0.186  Sum_probs=68.8

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        ++|||++..+..  ...+  +++..+    ...+.|......... ...+..|++|.|+|+++++++
T Consensus         5 ~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (112)
T cd08349           5 PVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALYAE   75 (112)
T ss_pred             EECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHHHH
Confidence            57777        889999987653  1223  445532    356666432221111 223456999999999999999


Q ss_pred             HhHHHHhcCCe-eecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          110 VNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       110 L~~~~~~~Gv~-i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      +    +++|++ +..++...+++ .+.+||+|||||+|||+|
T Consensus        76 l----~~~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          76 L----KAKGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             H----HHcCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            9    599998 66666655553 578999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.38  E-value=7.4e-12  Score=85.54  Aligned_cols=99  Identities=21%  Similarity=0.244  Sum_probs=65.2

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        ++|||++..+..    .+..  +..+..-......+..... . .....+..|++|.|+|+++++++
T Consensus         2 ~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~dv~~~~~~   73 (108)
T PF12681_consen    2 PVSDLEAAAAFYEDVLGFEVVFDDP----DYVD--FSLGFRFHDGVIEFLQFPD-P-PGPPGGGFHLCFEVEDVDALYER   73 (108)
T ss_dssp             EESSHHHHHHHHHHTTTSEEEEEET----SEEE--EEETEEEEEEEEEEEEEES-S-SSSSSSEEEEEEEESHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCCEEEEeCC----CeEE--EEeccchhhhhHHHccCCc-c-ccCCCceeEEEEEEcCHHHHHHH
Confidence            36777        789999998432    2222  2221100011223322111 1 11234678999999999999999


Q ss_pred             HhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          110 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       110 L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      +    +++|+++..+|...+++ .+.++|+|||||+|||+
T Consensus        74 l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   74 L----KELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             H----HHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             H----HHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            9    59999999988887774 68999999999999986

...

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=1.3e-11  Score=86.32  Aligned_cols=104  Identities=16%  Similarity=0.172  Sum_probs=65.4

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc----cc-ccCCCeeEEE--E
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----EY-TKGNAYAQVA--I   98 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~----~~-~~g~g~~Hia--f   98 (161)
                      ||+ .|+|+        ++|||++.....    .+  +++...+  ....+.+.......    .. ....+..|++  |
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--ccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            999 99999        899999865421    12  2233221  12333332111000    00 1112346765  5


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCC---CceEEEEEECCCCCEEEEEe
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPG---LNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~---~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .++|+++++++|    +++|+++..+|.....   +..+.+||+|||||.|||..
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            668999999999    6999999987764211   22578999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.34  E-value=1.7e-11  Score=99.11  Aligned_cols=107  Identities=17%  Similarity=0.134  Sum_probs=73.2

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +++++|++ .|+|+        ++|||++..+...     . +++.......+..+.+..  .     ...+..|+||.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~-----~-~~~~~~~~~~~~~~~l~~--~-----~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ-----R-VYLKAWDEWDHYSVILTE--A-----DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc-----e-EEEEeccccccceEeecc--C-----CCCceeEEEEEe
Confidence            46899999 99999        8999998765421     1 233321111123344421  1     124688999999


Q ss_pred             C---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +   |+++++++|    +++|+++...|.....+.++.+||+|||||.|||++...
T Consensus        69 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        69 ESEADLERLVKRL----EAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             CCHHHHHHHHHHH----HHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence            8   677888888    699999876654222223578999999999999998654

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.34  E-value=3.9e-11  Score=83.87  Aligned_cols=103  Identities=16%  Similarity=0.137  Sum_probs=67.7

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC--
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD--  102 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D--  102 (161)
                      -|+. .|+|+        ++|||+...+.+    .+. .|...+   ....+.+.  .....  ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~-~~~~~~---~~~~~~~~--~~~~~--~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DYA-KFLLED---PRLNFVLN--ERPGA--PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Cee-EEEecC---CceEEEEe--cCCCC--CCCCeeEEEEEeCCHH
Confidence            4899 99999        999998765531    121 232211   12333332  11111  11467899999998  


Q ss_pred             -HHHHHHHHhHHHHhcCCeeecCCcccCC-CceEEEEEECCCCCEEEEEecC
Q 031367          103 -VYKSAEVVNLVTQELGGKITRQPGSIPG-LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       103 -i~~~~~~L~~~~~~~Gv~i~~~p~~~~~-~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                       +++++++|    +++|+++..+|..... +..+.+||+|||||+|||++..
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             67777887    6999998876643321 2246899999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.33  E-value=3.1e-11  Score=83.75  Aligned_cols=99  Identities=19%  Similarity=0.183  Sum_probs=65.8

Q ss_pred             cceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeE--EEEEe
Q 031367           31 LPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ--VAIST  100 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~H--iaf~V  100 (161)
                      .+|+||+ .|+|+       +.|||++..+.+    ..  .+...+.  ....+.+. . ..     ..+..|  ++|.+
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~~lG~~~~~~~~----~~--~~~~~~~--~~~~~~~~-~-~~-----~~~~~~~~~~~~~   65 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYEAFGLDVREEGD----GL--ELRTAGN--DHRWARLL-E-GA-----RKRLAYLSFGIFE   65 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHHHhCCcEEeecC----ce--EEEecCC--CceEEEee-c-CC-----CCceeeEEEEeEh
Confidence            3689999 99999       779999975531    12  2333221  23334442 1 11     122334  55566


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +|+++++++|    +++|+++..+|.  +++ .+.+||+|||||+|||...
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~--~~~-~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPP--GAD-PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCC--cCC-CCEEEEECCCCCEEEEecC
Confidence            8999999999    599999886652  232 4579999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.32  E-value=4e-11  Score=96.42  Aligned_cols=104  Identities=24%  Similarity=0.248  Sum_probs=72.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      ++.+++|+. .|+|+        ++|||++..+..    .+  +|+..........+.|...       ...+..|+||.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~--~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----EY--IYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----Ce--EEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            357899999 99999        999999876532    12  3343211111233444321       12467899999


Q ss_pred             eC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |+   |+++++++|    +++|+++...+..  + ..+.+||+|||||.|||++..
T Consensus        68 v~~~~dl~~~~~~l----~~~Gv~v~~~~~~--~-~~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        68 VSKEEDLDKAADFF----QKLGHPVRLVRDG--G-QPEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             eCCHHHHHHHHHHH----HhcCCcEEeecCC--C-CceEEEEECCCCCEEEEEEch
Confidence            98   677888888    6999998865432  2 258899999999999999854

The enzyme from Bacillus brevis contains manganese.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.30  E-value=3.7e-11  Score=83.44  Aligned_cols=86  Identities=16%  Similarity=0.193  Sum_probs=67.4

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc--cccCCCeeEEEEEeCC
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDD  102 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~--~~~g~g~~Hiaf~V~D  102 (161)
                      +||+ .|+|+        ++||+....+...+..+.+.+++..++  ....|||+.+....+  ...+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~--~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD--GPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT--ETEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC--CcEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            6999 99999        889999877766666667777777654  237899987555432  1356799999999999


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCC
Q 031367          103 VYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                      +++++++|    +++|+++...+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    59999988764

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.30  E-value=4e-11  Score=82.94  Aligned_cols=100  Identities=20%  Similarity=0.181  Sum_probs=67.2

Q ss_pred             EE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCccc-ccCCCeeEEEEEeCC---
Q 031367           36 VV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAISTDD---  102 (161)
Q Consensus        36 v~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~-~~g~g~~Hiaf~V~D---  102 (161)
                      +. .|+|+        ++|||++....    ..+.  ++..++   ...+.|......... ....+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~--~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFA--LFVLGS---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceE--EEEeCC---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            45 78888        89999986542    1232  233222   345666432221111 122356799999986   


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      ++++++++    +++|+++..+|...+++  +.++|+|||||+|||+.
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCCc--cEEEEECCCCCEEEeeC
Confidence            67777777    69999999888877664  67899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.26  E-value=7.5e-11  Score=94.82  Aligned_cols=104  Identities=14%  Similarity=0.118  Sum_probs=71.5

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      .++.|++ .|+|+        ++|||++..+..  .+.   .|+..+.  .+..+.|. ..+      ..++.|++|.|+
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~~---~~~~~~~--~~~~~~l~-~~~------~~~~~~~~f~V~   67 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--NDA---LYLRLDS--RAHRIAVH-PGE------SDDLAYAGWEVA   67 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cce---EEEEcCC--CceEEEEE-ECC------cCCeeeEeeeeC
Confidence            5799999 99999        999999864421  121   2444432  23444442 211      135789999999


Q ss_pred             C---HHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEecC
Q 031367          102 D---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       102 D---i~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |   ++++.++|    +++|+++...|...  ..+..+.+||+|||||.|||+...
T Consensus        68 ~~~~l~~~~~~L----~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        68 DEAGLDQVKEKL----EKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             CHHHHHHHHHHH----HHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence            8   67777787    69999988766421  122257899999999999999753

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.24  E-value=1.3e-10  Score=81.06  Aligned_cols=94  Identities=20%  Similarity=0.173  Sum_probs=63.1

Q ss_pred             eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHHH
Q 031367           38 FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV  110 (161)
Q Consensus        38 ~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~L  110 (161)
                      .|+|+       +.|||++.++.  +  .+  +++..+    ...+.|.. .....  .. ...|++|.|+|+++++++|
T Consensus         8 ~v~Dl~~s~~FY~~LGf~~~~~~--~--~~--~~l~~~----~~~l~l~~-~~~~~--~~-~~~~~~~~v~did~~~~~l   73 (113)
T cd08356           8 PAKDFAESKQFYQALGFELEWEN--D--NL--AYFRLG----NCAFYLQD-YYVKD--WA-ENSMLHLEVDDLEAYYEHI   73 (113)
T ss_pred             ccccHHHHHHHHHHhCCeeEecC--C--CE--EEEEcC----CEEEEeec-CCCcc--cc-cCCEEEEEECCHHHHHHHH
Confidence            67788       45999997763  1  23  455543    23454432 11111  11 2358999999999999999


Q ss_pred             hHHHHhcCCeee-----cCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          111 NLVTQELGGKIT-----RQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       111 ~~~~~~~Gv~i~-----~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                          +++|+++.     .+|...+++ .+.++|+|||||+|+|.+
T Consensus        74 ----~~~G~~~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          74 ----KALGLPKKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             ----HHcCCcccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence                69999754     234444454 689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.20  E-value=3.2e-10  Score=78.61  Aligned_cols=101  Identities=20%  Similarity=0.138  Sum_probs=66.7

Q ss_pred             EE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC------cccccCCCeeEEEEEe
Q 031367           36 VV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TEYTKGNAYAQVAIST  100 (161)
Q Consensus        36 v~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~------~~~~~g~g~~Hiaf~V  100 (161)
                      |. .|+|+        ++|||++..+.   ...+  .++..+    ...++|......      .....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            56 78888        89999987662   1123  345543    355666422110      0011112234566665


Q ss_pred             ---CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          101 ---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       101 ---~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                         +|++++++++    ++.|+++..+|...+++ ++.+||+|||||+|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEee
Confidence               5788888888    59999998887766654 688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.96  E-value=6.5e-09  Score=79.50  Aligned_cols=90  Identities=19%  Similarity=0.307  Sum_probs=65.7

Q ss_pred             cceeEEE-eeC--Cc--------cccCCEEEEEEeCCC--CcEEEEEeeccCCCCceEEEEeeeCCC-c--------ccc
Q 031367           31 LPLNDVV-FVG--SL--------QALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV-T--------EYT   88 (161)
Q Consensus        31 ~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~~~--g~~~~~~l~~~~~~~~~~leL~~~~~~-~--------~~~   88 (161)
                      .+++||+ .|+  |+        ++|||+..++...++  ......++..+.  +...++|..+... .        ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            4699999 999  99        999999988765433  334445565443  3577878533221 1        112


Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCc
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  126 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~  126 (161)
                      .+.|++||||.|+|+++++++|    +++|+++...|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            3678999999999999999999    699999987763

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.76  E-value=1.4e-07  Score=74.92  Aligned_cols=109  Identities=17%  Similarity=0.173  Sum_probs=74.8

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-ccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~~~~g~g~~Hiaf   98 (161)
                      +.+.+.-+. .|+|+        ++||+++..+...      .+-++.++   ...|.|...+... +.+...|.-|+||
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC---EEEEEEEeCCCCCCCCccccceeeeee
Confidence            457889999 99999        9999999877532      13455553   3556664333222 1234457889999


Q ss_pred             EeCCH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 STDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V~Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .+++.   .+.+.++    ...|+++. ++.  ++.....+||.||+||-||+....+
T Consensus        78 LlP~r~~L~~~l~hl----~~~~~~l~-Ga~--DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          78 LLPTREDLARVLNHL----AEEGIPLV-GAS--DHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             ecCCHHHHHHHHHHH----HhcCCccc-ccC--cchhheeeeecCCCCCeEEEEecCC
Confidence            99975   4445555    68888876 222  2333568999999999999998643

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.74  E-value=4.5e-07  Score=65.06  Aligned_cols=111  Identities=22%  Similarity=0.229  Sum_probs=76.5

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccC-CCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +...+.|.- .|+|+        ++||++........  ....+.+.... ..... +  ...  . ....+.+..++-|
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~--~~~y~~f~~~~~~~gG~-l--~~~--~-~~~p~~~~~~iy~   77 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMG--EMRYAVFPADGAGAGGG-L--MAR--P-GSPPGGGGWVIYF   77 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccCC--CceEEEEECCCccccce-e--ccC--C-cCCCCCCCEEEEE
Confidence            445688888 99999        99999997664332  23333333222 11111 1  111  1 1122133458999


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+|++++.+|.    +++|.+++.++...|++ ++++.|.||+||+|-|.+..
T Consensus        78 ~v~did~~l~rv----~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          78 AVDDIDATLERV----VAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             ecCChHHHHHHH----HhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            999999999999    59999999999988864 78999999999999998753

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.62  E-value=2.1e-07  Score=77.32  Aligned_cols=91  Identities=15%  Similarity=0.305  Sum_probs=63.5

Q ss_pred             CCcceeEEE-eeC--Cc--------cccCCEEEEEEeCCC--CcEEEEEeeccCCCCceEEEEeeeCCC---c------c
Q 031367           29 KDLPLNDVV-FVG--SL--------QALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV---T------E   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~~~--g~~~~~~l~~~~~~~~~~leL~~~~~~---~------~   86 (161)
                      ...+++||+ .|+  |+        ++|||+..++.....  ..+....+..+.  +...|+|..+...   .      .
T Consensus       155 ~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~--g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       155 GLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPD--GKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCC--CcEEEEEeccCCCCCCCHHHHHHH
Confidence            456799999 999  88        899999987765422  122212233222  3577888642111   1      1


Q ss_pred             cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           87 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        87 ~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                      ...+.|++||||.|+|+++++++|    +++|+++...|
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            123679999999999999999999    59999999876

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.59  E-value=2.3e-06  Score=71.10  Aligned_cols=112  Identities=19%  Similarity=0.226  Sum_probs=73.0

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc----c--ccCCCeeE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----Y--TKGNAYAQ   95 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~----~--~~g~g~~H   95 (161)
                      ++++|+. .|+|+        +.|||+..++.....+... +.+..+    ...++|........    +  .++.+..|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~-~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKAS-HVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeE-EEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            4689999 99999        8999999877322222222 223322    46788864322211    1  25678999


Q ss_pred             EEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           96 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        96 iaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |||.|+|++++++++    +++|+++..+|.....+..+..-++-++|..+=|+++
T Consensus        76 iaf~V~Dv~~a~~~l----~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~  127 (353)
T TIGR01263        76 VAFRVDDAAAAFEAA----VERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDR  127 (353)
T ss_pred             EEEEECCHHHHHHHH----HHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcC
Confidence            999999999999999    5999999887764311112333345556666666654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.58  E-value=1.9e-06  Score=61.22  Aligned_cols=51  Identities=12%  Similarity=-0.010  Sum_probs=41.0

Q ss_pred             eeEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367           93 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus        93 ~~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      ..++++.|+|   +++++++|     ++|.++..+|...+++ .++++|+||+|+.|+|.
T Consensus        75 ~~~l~i~~~~~e~v~~~~~~l-----~~~g~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          75 GISLSVECDSEEEADRLFEAL-----SEGGTVLMPLQKTFWS-PLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             CEEEEEECCCHHHHHHHHHHH-----hcCCeEeccchhcCcc-cccEEEECCCCCEEEeC
Confidence            3589999987   66777777     3455888888888876 68899999999999983

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.56  E-value=3.6e-07  Score=62.66  Aligned_cols=113  Identities=20%  Similarity=0.216  Sum_probs=63.6

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCc---EEEEEeeccCCCCceEEE--------EeeeCCCc-cccc
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYK---YTLAMLGYAEEDQTTVLE--------LTYNYGVT-EYTK   89 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~---~~~~~l~~~~~~~~~~le--------L~~~~~~~-~~~~   89 (161)
                      ++++||+ .|+|+        ++|||+...+.......   ....+.............        ........ ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            4689999 99999        89999998876543221   112222211000000000        00000000 0111


Q ss_pred             C-CCeeEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           90 G-NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        90 g-~g~~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      + .+..|+++.+++   ..+.....    ...|..+...+. ..+  ...+||+||||++|||.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence            1 246799999999   44444444    467888665443 222  238999999999999974

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.34  E-value=2e-06  Score=72.63  Aligned_cols=90  Identities=17%  Similarity=0.196  Sum_probs=64.8

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCC-----CcEEEEEeeccCCCCceEEEEeeeCCC---c-------
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNYGV---T-------   85 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----g~~~~~~l~~~~~~~~~~leL~~~~~~---~-------   85 (161)
                      ..+|+|++ .|+||        ++|||+..+..+.+.     .+.....+..+.  +...++|..+...   .       
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHHH
Confidence            46899999 99999        899999987654321     123445566443  3577888543211   1       


Q ss_pred             ccccCCCeeEEEEEeCCHHHHHHHHhHHHHhc----CCeeecCC
Q 031367           86 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  125 (161)
Q Consensus        86 ~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~----Gv~i~~~p  125 (161)
                      ....|.|++||||.|+|+.+++++|    +++    |+++...|
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            1234679999999999999999999    587    99999854

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.15  E-value=2.5e-05  Score=54.93  Aligned_cols=108  Identities=19%  Similarity=0.170  Sum_probs=69.2

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEee-ccCCCCceEEEEeeeCCCc---ccc-cCCCeeEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLG-YAEEDQTTVLELTYNYGVT---EYT-KGNAYAQV   96 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~-~~~~~~~~~leL~~~~~~~---~~~-~g~g~~Hi   96 (161)
                      +.+-|.+ -|+||        ++||.++-++-+    .|  +-++ ++.   +....|.......   ... .+--..|+
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd----~w--vdfDfyGH---Q~v~Hl~~q~~~~~~g~V~~~~v~~pHf   73 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD----TW--VDFDFYGH---QVVAHLTPQPDSQGSGKVDGHGVPPPHF   73 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc----eE--EEeeeccc---EEEEEecCCcccccCcccCCCCCCCccc
Confidence            4567999 99999        999998865432    12  2222 222   4566664222111   111 11123454


Q ss_pred             --EEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCC---CceEEEEEECCCCCEEEEEec
Q 031367           97 --AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG---LNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        97 --af~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~---~~~~~~f~~DPDG~~IEl~~~  151 (161)
                        .|.++|-.+..+||+    ++|+++..+|...-.   +..+.+|+.||.||.||+-..
T Consensus        74 GvVl~~edW~alaerle----a~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          74 GVVLPVEDWFALAERLE----AAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             eEEEEHHHHHHHHHHHH----HcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence              456678889999995    999999888864322   236889999999999999653

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.12  E-value=0.00015  Score=52.76  Aligned_cols=101  Identities=16%  Similarity=0.105  Sum_probs=67.2

Q ss_pred             cccCCEEEEEEeCCC----------CcEEEEEeeccCCCCceEEEEeeeCCCcccccCC-CeeEEEEEeCCHHHHHHHHh
Q 031367           43 QALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN-AYAQVAISTDDVYKSAEVVN  111 (161)
Q Consensus        43 ~vLG~~~~~~~~~~~----------g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~-g~~Hiaf~V~Di~~~~~~L~  111 (161)
                      ++||.++..+...++          +..--+-|..+    ...|-+.-..+......++ ...-|-+.++|+++.++++ 
T Consensus        21 ~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~l~~~~~d~da~f~~a-   95 (136)
T COG2764          21 EVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLSLDLYVEDVDAVFERA-   95 (136)
T ss_pred             HHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEEEEEEehHHHHHHHHH-
Confidence            899999988877665          23222222222    1223221111111112222 2346777888899999999 


Q ss_pred             HHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          112 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       112 ~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                         .+.|++++.++..+.|+ .++.-|+||.|+.|-|....
T Consensus        96 ---~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          96 ---AAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             ---HhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCc
Confidence               59999999999999997 78899999999999998764

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=97.90  E-value=0.00013  Score=51.98  Aligned_cols=110  Identities=20%  Similarity=0.141  Sum_probs=65.7

Q ss_pred             eeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-----c--cccCCCeeEEE
Q 031367           33 LNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----E--YTKGNAYAQVA   97 (161)
Q Consensus        33 i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-----~--~~~g~g~~Hia   97 (161)
                      .-.|+ -|+||       ..|||+.........  .. .++-.+    ...+-|+...--.     +  -...+.-.-||
T Consensus         4 mIFvNLPVkDL~~S~~Fy~alGfk~Npq~sde~--a~-~mi~~~----ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~   76 (133)
T COG3607           4 MIFVNLPVKDLEASKAFYTALGFKFNPQFSDED--AA-CMIISD----NIFVMLLEEARFQTFTKRQIADTTKSREVLIS   76 (133)
T ss_pred             EEEEecchhhHHHHHHHHHHhCcccCCCccccc--ce-eEEEec----cEEEEEeccHHhhhhcccccccccCCceEEEE
Confidence            44678 89999       899999965543322  11 222211    3445554211100     0  01223445799


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           98 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +++.+-++ ++.+...+++.|.+...+|.+  .+..+..-|.|||||.||+....
T Consensus        77 ls~~s~ee-vd~~v~ka~eaGGk~~~~~~d--~gfMYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          77 LSAGSREE-VDELVDKALEAGGKPANEPQD--EGFMYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             eccCcHHH-HHHHHHHHHHcCCCCCCCccc--cccccceeeeCCCCCeEEEEEeC
Confidence            99986532 333333347999998777764  33356677999999999998753

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.79  E-value=0.00045  Score=51.71  Aligned_cols=111  Identities=21%  Similarity=0.213  Sum_probs=59.2

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc---c---------ccCC
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---Y---------TKGN   91 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~---~---------~~g~   91 (161)
                      |+|+. .|+|+        +.|||.+......+..+..-..+-.++   . .|||+...+...   .         ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            79999 99999        788999998887776444433344443   3 899986322111   0         1356


Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCc--eEEEEEECC----CCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDP----DGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~--~~~~f~~DP----DG~~IEl~~~~  152 (161)
                      |+.++||+++|+++..++|    ++.|+... .+...++..  -+.+++.|+    .+..=++++..
T Consensus        77 g~~~~~l~t~d~~~~~~~l----~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~  138 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARL----RAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWE  138 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHH----HTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEES
T ss_pred             CeEEEEEecCCHHHHHHHH----HhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeC
Confidence            8899999999999999999    58998621 111111211  245677775    25667777553

>PRK10148 hypothetical protein; Provisional

Probab=97.35  E-value=0.0096  Score=43.63  Aligned_cols=52  Identities=15%  Similarity=0.006  Sum_probs=43.9

Q ss_pred             eEEEEEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           94 AQVAISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        94 ~Hiaf~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .+|++.++|.++   ++++|     +.|.++..++...+|+ .++..|+||.|+.|-|...
T Consensus        87 ~~l~l~~~d~ee~~~~~~aL-----a~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         87 FTLVLDTQDVEEGKRWFDNL-----AANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             EEEEEECCCHHHHHHHHHHh-----hCCCEEEecchhcchh-hccEEEECCCCCEEEEEec
Confidence            488899889765   55555     7999999999998886 6889999999999999875

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=97.27  E-value=0.01  Score=50.39  Aligned_cols=113  Identities=18%  Similarity=0.207  Sum_probs=74.2

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCC-----------------
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGV-----------------   84 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~-----------------   84 (161)
                      ++||- +|.|.        ..|||+.........|  ......+.-+    ...+-|......                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccccccccccc
Confidence            58999 99998        6899998776442122  1222233322    344444322111                 


Q ss_pred             --cc----c--ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCC----CceEEEEEECCCCCEEEEEecC
Q 031367           85 --TE----Y--TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG----LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        85 --~~----~--~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~----~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                        ..    +  .+|.+..-|||+|+|++++++++    .++|++...+|.....    +.....-++-++|..+-|+++.
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A----~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTS----VAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHH----HHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence              00    1  35678889999999999999999    5999998887765422    1134555788899999998864


Q ss_pred             C
Q 031367          153 D  153 (161)
Q Consensus       153 ~  153 (161)
                      .
T Consensus       153 ~  153 (398)
T PLN02875        153 G  153 (398)
T ss_pred             C
Confidence            3

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.24  E-value=0.015  Score=42.42  Aligned_cols=112  Identities=19%  Similarity=0.113  Sum_probs=69.6

Q ss_pred             CCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc--c--cccCCCeeEE
Q 031367           29 KDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--E--YTKGNAYAQV   96 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~--~--~~~g~g~~Hi   96 (161)
                      ...+++||- .|+|.       ..|||+...+-...  ...+ |-. +    ...+-|...+...  .  ..+|.+..-|
T Consensus         6 g~~G~dFvEFa~~~~~~l~~~~~~lGF~~~a~hrsk--~v~l-~rQ-G----~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    6 GLDGFDFVEFAVPDAQALAQLFTALGFQPVARHRSK--DVTL-YRQ-G----DINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             -EEEEEEEEEE-SSTTSCHHHHCCCCEEEECCECCC--SEEE-EEE-T----TEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCeEEEEEecCCHHHHHHHHHHhCcceEEecCCc--ceEE-EEe-C----CEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            346789999 99887       88999998764332  2332 222 2    3445443322221  1  1367889999


Q ss_pred             EEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           97 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        97 af~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ||+|+|.++++++.    .++|.+...+|...  +.....=++-++|-++-|+++..-
T Consensus        78 afrV~Da~~A~~rA----~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   78 AFRVDDAAAAYERA----VALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEES-HHHHHHHH----HHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEeCCHHHHHHHH----HHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            99999999999999    59999987665432  224566689999999999998543

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.23  E-value=0.00049  Score=56.24  Aligned_cols=119  Identities=17%  Similarity=0.213  Sum_probs=73.9

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCc--c-----ccc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVT--E-----YTK   89 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~--~-----~~~   89 (161)
                      ....+++||. +|.|.        ..|||+.......+.|  .|.-.-+..    +..+.-+...+.+.  .     ..+
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~----g~~vFv~~s~~~p~~~~~G~~l~~H   88 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ----GKIVFVFNSAYNPDNSEYGDHLVKH   88 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc----CCEEEEEecCCCCCchhhhhhhhhc
Confidence            3557899999 99998        7889987654322211  111011111    11222222122211  1     135


Q ss_pred             CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCC--ceEEEEEECCCCCEEEEEecCCc
Q 031367           90 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        90 g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~--~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |.+..-+||.|+|++++.+.+    +++|+++.++|......  ..+++-++-+.-...-++++..+
T Consensus        89 gdgvkdvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y  151 (381)
T KOG0638|consen   89 GDGVKDVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGY  151 (381)
T ss_pred             ccchhceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccc
Confidence            667889999999999999999    59999999988755442  24677788777666666665443

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.09  E-value=0.0019  Score=44.42  Aligned_cols=56  Identities=18%  Similarity=0.128  Sum_probs=41.4

Q ss_pred             eEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCC-CEEEEEecCC
Q 031367           94 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG-WKTVLVDNED  153 (161)
Q Consensus        94 ~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG-~~IEl~~~~~  153 (161)
                      +|++|.|+|++++.+.+.   +..|+.....-.. +....+..++..++| ..|||+++..
T Consensus         1 dHv~i~V~Dl~~a~~~~~---~~lG~~~~~~~~~-~~~~v~~~~~~~~~~~~~iELi~p~~   57 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYC---DVLGFEPWERYRD-EPQGVRVAFLYLGDGPVQIELIQPLD   57 (109)
T ss_dssp             EEEEEEES-HHHHHHHHH---HCTTHEEEEEEEE-GCTTEEEEEEEETTETEEEEEEEESS
T ss_pred             CEEEEEcCCHHHHHHHHH---HhhCCcEEEEEec-CCCCEEEEEEEeCCCcEEEEEEEeCC
Confidence            599999999999999996   3489875533222 222357888999998 6999999754

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.99  E-value=0.0019  Score=53.41  Aligned_cols=87  Identities=21%  Similarity=0.354  Sum_probs=59.9

Q ss_pred             cceeEEE-eeC--Cc--------cccCCEEEEEEeCCC--Cc-EEEEEeeccCCCCceEEEEeeeCCCcc---------c
Q 031367           31 LPLNDVV-FVG--SL--------QALGMKLLRTVDKPE--YK-YTLAMLGYAEEDQTTVLELTYNYGVTE---------Y   87 (161)
Q Consensus        31 ~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~~~--g~-~~~~~l~~~~~~~~~~leL~~~~~~~~---------~   87 (161)
                      ..|+|++ .|.  .|        .+|||+.....+.++  +. .+-++.+ +.  +.  +.|..|.+.+.         .
T Consensus       166 ~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S-p~--G~--vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         166 TAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS-PC--GK--VRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             eeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec-CC--Cc--EEeecccCCCchhHHHHHHHH
Confidence            5899999 887  33        899999988776543  22 2233344 22  23  44433443321         1


Q ss_pred             ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCc
Q 031367           88 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  126 (161)
Q Consensus        88 ~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~  126 (161)
                      -.|.|++||||.++|+.+++++|    +++|+++...|.
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHH----HHcCCccCCCch
Confidence            25779999999999999999999    599999987653

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=96.89  E-value=0.0064  Score=50.58  Aligned_cols=101  Identities=16%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      .-+.-||+ .|+|+        ..|||.. ++    ++.. ..+   ++   ...+-| .... + . ....-.-+|+++
T Consensus       245 ~~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~a-~cm---~d---tI~vMl-lt~~-D-~-~~~~evLl~Ls~  308 (357)
T PRK01037        245 SPKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDKL-FLL---GK---TSLYLQ-QTKA-E-K-KNRGTTTLSLEL  308 (357)
T ss_pred             CCceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCcc-ccc---cC---cEEEEE-ecCC-C-C-CCcceEEEEecc
Confidence            34566999 99999        5567664 33    2221 122   22   233322 2222 1 1 122345799999


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ++-++ ++.+.+.+.++|.+...+|.+.  |.  .--|.|||||.||++..
T Consensus       309 ~Sre~-VD~lv~~A~aaGG~~~~~~~D~--Gf--~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        309 ECEHD-FVRFLRRWEMLGGELGEQADGH--FP--LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CCHHH-HHHHHHHHHHcCCCCCCCcccc--cC--cceeECCCCCEEEEEEE
Confidence            98643 3444445578999766555543  32  33489999999999864

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=95.99  E-value=0.0023  Score=52.42  Aligned_cols=115  Identities=18%  Similarity=0.330  Sum_probs=73.4

Q ss_pred             CCCcceeEEE-eeCCc----------cccCCEEEEEEeCCCCc--EE----EEEeeccCCCCceEEEEeeeCCCc-----
Q 031367           28 PKDLPLNDVV-FVGSL----------QALGMKLLRTVDKPEYK--YT----LAMLGYAEEDQTTVLELTYNYGVT-----   85 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl----------~vLG~~~~~~~~~~~g~--~~----~~~l~~~~~~~~~~leL~~~~~~~-----   85 (161)
                      +...+++|+. .++|.          +.|||...|..+.+.-.  ++    ++..++     .-.+.+..+.+.+     
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~-----~esi~mpinEp~~G~k~k  248 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANY-----EESIKMPINEPAPGKKKK  248 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcC-----CccEEEeccCCCCCCccH
Confidence            4567899999 99988          99999998876533200  00    011111     1223343333321     


Q ss_pred             -------ccccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCccc--------C-----CCc-----eE--EEEE
Q 031367           86 -------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--------P-----GLN-----TK--ITSF  138 (161)
Q Consensus        86 -------~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~--------~-----~~~-----~~--~~f~  138 (161)
                             .|..|.|.+|||+.++|+-.+++.|    +++|.++...|..-        .     -..     .+  +..=
T Consensus       249 sQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD  324 (381)
T KOG0638|consen  249 SQIQEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVD  324 (381)
T ss_pred             HHHHHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEe
Confidence                   1356789999999999999999999    69999999877411        0     000     11  2223


Q ss_pred             ECCCCCEEEEEec
Q 031367          139 VDPDGWKTVLVDN  151 (161)
Q Consensus       139 ~DPDG~~IEl~~~  151 (161)
                      .|-+|+++.|+.-
T Consensus       325 ~De~gyLLQIFTK  337 (381)
T KOG0638|consen  325 FDENGYLLQIFTK  337 (381)
T ss_pred             cCCCcEEeeeecc
Confidence            6777999999874

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=95.68  E-value=0.49  Score=33.67  Aligned_cols=96  Identities=23%  Similarity=0.342  Sum_probs=47.7

Q ss_pred             cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccc-cC-CCeeEEEEEeCCHHHHHHHHhHHHHhcCCe
Q 031367           43 QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT-KG-NAYAQVAISTDDVYKSAEVVNLVTQELGGK  120 (161)
Q Consensus        43 ~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~-~g-~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~  120 (161)
                      +.|||+++.+..      .+++++..  +....+.|-.+++....+ .| -...+|-+.|++.+++.+-|     ++|..
T Consensus        20 ~~LGfkll~EEn------a~a~lg~~--~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EIe~LL-----ar~~~   86 (125)
T PF14506_consen   20 KTLGFKLLSEEN------ALAILGDQ--QKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEIEALL-----ARGAQ   86 (125)
T ss_dssp             TTT--EEEEEET------TEEEEE-T--T--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHHHHHH-----HC-S-
T ss_pred             hccCcEEeeccc------cEEEecCC--CCceEEEEecCCccccccccCcceeeEEEEEcCCHHHHHHHH-----hcccc
Confidence            899999987753      13566653  234445553344332211 22 36789999999988765555     77766


Q ss_pred             eecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367          121 ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus       121 i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      +..-   ..+..++.+-..+|+|.++.|....+.
T Consensus        87 ~~~l---~kg~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   87 YDRL---YKGKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             -SEE---EE-SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             ccee---EEcCCceEEEEECCCCCEEEEEEcCCH
Confidence            4321   112223444488999999999987543

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=95.31  E-value=0.13  Score=37.90  Aligned_cols=58  Identities=17%  Similarity=0.177  Sum_probs=40.8

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcc-----------------cCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS-----------------IPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~-----------------~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+++.|.|++++.+-.+   +..|.++..++..                 .++...+.+++.-++|..|||++..
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~---~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYT---EVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHH---HhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            57999999999999888775   4579876432110                 0111135677887889999999975

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.92  E-value=0.18  Score=34.27  Aligned_cols=59  Identities=17%  Similarity=0.170  Sum_probs=39.2

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECC---CCCEEEEEecCC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP---DGWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DP---DG~~IEl~~~~~  153 (161)
                      ++.|+++.|+|++++.+-..   +..|.+.............+.+++.+.   +|..++|.+...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYT---DVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHH---HccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            46899999999998888875   457988664322111111344556665   678899987644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.89  E-value=0.19  Score=35.41  Aligned_cols=57  Identities=21%  Similarity=0.263  Sum_probs=39.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCccc----------CCCceEEEEEECCCC-CEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI----------PGLNTKITSFVDPDG-WKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~----------~~~~~~~~f~~DPDG-~~IEl~~~~  152 (161)
                      +++|+++.|.|++++.+-..    +.|.++.......          +....+.+++..|+| ..|||++..
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~----~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~   70 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFL----ELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFH   70 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHH----HcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEec
Confidence            57899999999999888885    5898865432110          111235677777765 689999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.40  E-value=0.36  Score=32.54  Aligned_cols=57  Identities=25%  Similarity=0.209  Sum_probs=38.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +++||++.|+|++++.+-..   +..|..+...... +......+.+..+++..||+....
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYV---EILGFKVIREVYR-PERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHH---HhcCCEEeeeeec-CCCCcEEEEEecCCCcEEEEEEcC
Confidence            57899999999999888875   4689887643221 111112234556677889988654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=93.89  E-value=0.33  Score=39.01  Aligned_cols=67  Identities=16%  Similarity=0.157  Sum_probs=43.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc--cc--ccCCCeeE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EY--TKGNAYAQ   95 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~--~~--~~g~g~~H   95 (161)
                      ....|.||. .|.|+        ++|||++..+...      ..|++.++  .+..+.. ..|...  ..  ....|+..
T Consensus       165 ~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~~------A~F~a~G~--YHHHia~-N~W~s~~~~~~~~~~~GLa~  235 (265)
T COG2514         165 AGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGPS------ALFLASGD--YHHHLAA-NTWNSRGARPRNANASGLAW  235 (265)
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCCc------ceEEecCC--cceeEEE-eccccCCCCCCCCCCCCcce
Confidence            367899999 99999        8999999887221      25777765  3333444 233322  11  12347778


Q ss_pred             EEEEeCCHH
Q 031367           96 VAISTDDVY  104 (161)
Q Consensus        96 iaf~V~Di~  104 (161)
                      +.+.+++-.
T Consensus       236 ~~i~~~~~~  244 (265)
T COG2514         236 LEIHTPDPE  244 (265)
T ss_pred             EEEEcCCcc
Confidence            888888753

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=93.40  E-value=0.49  Score=32.16  Aligned_cols=56  Identities=11%  Similarity=0.095  Sum_probs=37.8

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +.|++|.|+|++++.+-..   +..|.+........+......+|++. +|..++|+++.
T Consensus         1 ~~hv~l~v~d~~~~~~fy~---~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   56 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYR---DVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPL   56 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHH---HhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEEC
Confidence            3699999999999888885   45788765432221122234566664 78889999864

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=92.62  E-value=0.25  Score=36.68  Aligned_cols=54  Identities=20%  Similarity=0.206  Sum_probs=29.1

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCc-eEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN-TKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~-~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +.|+.+.|+|++++.++++   ++.|.++...-.-..+|. ...++|  +|| .|||+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~---~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFE---QRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GG---GS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhh---hcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeC
Confidence            4799999999999999995   488999774322112232 244555  678 99999964

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.92  E-value=1.4  Score=29.67  Aligned_cols=56  Identities=18%  Similarity=0.126  Sum_probs=36.0

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++|+++.|+|++++.+-.+   +..|.+....-.. +.......|+.-.+|..|||++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~---~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYV---TYFGATSNEKYHN-PRKGFESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHH---HHhCCEeeceEeC-CCCCceEEEEecCCCcEEEEEcCc
Confidence            5799999999998887775   4578875422110 111123445554578889998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.58  E-value=1  Score=29.47  Aligned_cols=55  Identities=18%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ++|+++.|+|++++.+-.+   ...|.+....+...    ...+++..+++..++|.+....
T Consensus         1 i~Hi~l~v~d~~~~~~FY~---~~lG~~~~~~~~~~----~~~~~~~~~~~~~i~l~~~~~~   55 (114)
T cd07245           1 LDHVALRVPDLEASRAFYT---DVLGLEEGPRPPFL----FPGAWLYAGDGPQLHLIEEDPP   55 (114)
T ss_pred             CCeEEEecCCHHHHHHHHH---HccCCcccCcCCCC----CCceEEEeCCCcEEEEEecCCC
Confidence            4799999999998887775   57788765443211    1335666666668898876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=90.66  E-value=1.5  Score=29.52  Aligned_cols=56  Identities=20%  Similarity=0.130  Sum_probs=36.8

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC---CCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD---G~~IEl~~~~  152 (161)
                      +.|+++.|+|++++.+-..   ...|.+....+... ......+|+..++   +..|++.+..
T Consensus         1 ~~hv~i~v~d~~~a~~fY~---~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYT---DVLGMKLLRRKDFP-EGKFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             CeeEEEEecCcHHHHHHHH---hccCCeEEEEEecC-CCceEEEEecCCCCCCccEEEEEecC
Confidence            3699999999998888775   45698876543221 1112345666554   6789987653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=90.52  E-value=2.5  Score=35.34  Aligned_cols=104  Identities=19%  Similarity=0.172  Sum_probs=63.3

Q ss_pred             cCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc------cccC
Q 031367           26 FNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKG   90 (161)
Q Consensus        26 ~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~------~~~g   90 (161)
                      .++..+++++|- .|.|.        ..|||+....--..  .+.+ |-.     +.  +-|+.+.....      ..+|
T Consensus        16 ~P~~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~v~l-~rQ-----Gd--inlvvn~~~~s~a~~f~~~Hg   85 (363)
T COG3185          16 NPEGTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--AVTL-YRQ-----GD--INLVVNAEPDSFAAEFLDKHG   85 (363)
T ss_pred             CCCCCCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--ceeE-EEe-----CC--EEEEEcCCCcchhhHHHHhcC
Confidence            334468899999 99988        88899885543222  2322 222     12  33333333221      1356


Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCc-----ccCC---CceEEEEEECCCC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG-----SIPG---LNTKITSFVDPDG  143 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~-----~~~~---~~~~~~f~~DPDG  143 (161)
                      .+..-+||.|+|..+++++.    .+.|.+....+.     .+|.   ..+..+||.|..|
T Consensus        86 ps~~a~a~~V~DA~~A~a~A----~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          86 PSACAMAFRVDDAEQALARA----LALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             CchheeEEeeCCHHHHHHHH----HHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            77889999999999999998    489985443322     1221   1245788888773

>PRK11478 putative lyase; Provisional

Probab=90.46  E-value=1.9  Score=29.54  Aligned_cols=56  Identities=13%  Similarity=0.009  Sum_probs=34.4

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ++.|+++.|+|++++.+-..   +..|.++...... +........+.-.++..+|+++.
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~   61 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYC---DILGFTLQSEVYR-EARDSWKGDLALNGQYVIELFSF   61 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHH---HHhCCEecccccc-cccccceeeEecCCCcEEEEEEe
Confidence            57899999999999887775   5679887543211 11001112222235678888864

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.46  E-value=1.3  Score=30.21  Aligned_cols=53  Identities=15%  Similarity=0.091  Sum_probs=35.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhc---CCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~---Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +++|+.+.|+|++++.+-..   +..   |.+......   .   ...|+...++..|+|.+...
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~---~~l~~~G~~~~~~~~---~---~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYD---WLLGLLGFEEVKEWE---D---GRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHH---HHHhhcCCEEEEeec---c---CceEEecCCceEEEEEeccc
Confidence            47899999999999888775   334   888664431   1   22344335677888887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=90.26  E-value=1.4  Score=29.64  Aligned_cols=56  Identities=20%  Similarity=0.253  Sum_probs=38.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCc-ccCCCceEEEEEECCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~-~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +++|+++.|.|++++.+-.+   +..|.++..... ..........++...+. .+++...
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~   57 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYT---DVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFLN   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHH---HHhCCcEEeeeccccccccccceeeccccc-ceeeeee
Confidence            47899999999998888776   679999876544 12222134555666654 4666665

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=89.95  E-value=2.9  Score=31.72  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=27.0

Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecC
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  124 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~  124 (161)
                      .+-.+.|++|.|.|++++++-..   +..|.++...
T Consensus        24 ~~~~~~Ht~i~V~Dle~Si~FY~---~vLG~~~~~r   56 (185)
T PLN03042         24 KGYIMQQTMFRIKDPKASLDFYS---RVLGMSLLKR   56 (185)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHH---hhcCCEEEEE
Confidence            45678999999999999888775   5689987654

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=89.55  E-value=1.7  Score=27.83  Aligned_cols=53  Identities=13%  Similarity=0.193  Sum_probs=39.0

Q ss_pred             EEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           95 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        95 Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |+++.|+|++++.+-+.   +..|.+.......   ...+.+++.++ +..|+|.+..+.
T Consensus         1 Hi~i~~~d~~~~~~fy~---~~lg~~~~~~~~~---~~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYE---EVLGFEVLFRNGN---GGAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHH---hccCCEEEEeecc---CCEEEEEEecC-CceEEEecCCCC
Confidence            88999999999888885   3489887754421   12466777776 799999997653

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=88.69  E-value=2.6  Score=30.74  Aligned_cols=52  Identities=13%  Similarity=0.160  Sum_probs=35.8

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEEC--CCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVD--PDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~D--PDG~~IEl~~~~  152 (161)
                      |++||++.|+|++++.+-.+   +-.|.++.....      ....|+..  .++..|+|.+..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~---~~LG~~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLT---DVLGFREVGEEG------DRVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHH---HhcCCEEEeeeC------CEEEEEecCCCCCCEEEEEeCC
Confidence            57899999999999888875   456888654321      12333333  358899998863

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.92  E-value=2.8  Score=27.68  Aligned_cols=54  Identities=17%  Similarity=0.162  Sum_probs=35.5

Q ss_pred             EEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCC--CEEEEEecCC
Q 031367           95 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG--WKTVLVDNED  153 (161)
Q Consensus        95 Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG--~~IEl~~~~~  153 (161)
                      |+++.|.|++++.+-..   +..|.++........  ...++++.++++  ..++|.+...
T Consensus         1 Hv~l~v~d~~~~~~fY~---~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~   56 (119)
T cd07263           1 LVSLYVDDQDKALAFYT---EKLGFEVREDVPMGG--GFRWVTVAPPGSPETSLVLAPPAN   56 (119)
T ss_pred             CceEEeCCHHHHHHHHH---hccCeEEEEeeccCC--CcEEEEEeCCCCCeeEEEEeCCCC
Confidence            89999999998877664   458988775432111  134666777764  5677765543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=87.17  E-value=2.9  Score=31.68  Aligned_cols=59  Identities=12%  Similarity=0.037  Sum_probs=40.9

Q ss_pred             CeeEEEEEeC--CHHHHHHHHhHHHHhcCCeeecCCcc-cCCCceEEEEEECCC-CCEEEEEecCC
Q 031367           92 AYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGS-IPGLNTKITSFVDPD-GWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~-~~~~~~~~~f~~DPD-G~~IEl~~~~~  153 (161)
                      +++|+++.|+  |++++.+-.+   ...|.+....... .+....+..++..|+ +..|+|.++.+
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~---~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYR---KVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHH---HhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5789999999  9998887765   5689886543221 112224567788887 46799998754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=86.10  E-value=3.7  Score=27.79  Aligned_cols=54  Identities=19%  Similarity=0.307  Sum_probs=34.9

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +.|+++.|+|++++.+-.+   +..|.+...... .+......+++. +++..|||.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~---~~lG~~~~~~~~-~~~~~~~~~~~~-~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYE---DVLGAHVSHIEE-VPEQGVKVVFIA-LGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHH---HHhCCCCcccee-CCCCCcEEEEEe-cCCEEEEEEec
Confidence            5799999999999888885   457887653211 111112444444 34678898864

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.98  E-value=4.8  Score=27.20  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=35.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC-CCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD-GWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD-G~~IEl~~~~  152 (161)
                      .++|+++.|+|++++.+-..   ...|.++....       ...+++...+ +..|.|.+.+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~---~~lG~~~~~~~-------~~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQ---DVLGLEVLERT-------DSTAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHH---hccCcEEEEcC-------CCEEEEecCCCeEEEEEEeCC
Confidence            36899999999998887775   45798876542       1234555554 5677777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=85.12  E-value=6.9  Score=30.99  Aligned_cols=60  Identities=20%  Similarity=0.214  Sum_probs=39.6

Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEE--C----C------------CCCEEEEEe
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV--D----P------------DGWKTVLVD  150 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~--D----P------------DG~~IEl~~  150 (161)
                      .+-.+.|.+++|.|+++.++-..   +..|.+...... .+....+..|+.  +    |            ++..|||..
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt---~vLGm~ll~r~d-~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~  147 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYS---RVLGMSLLKRLD-FPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTH  147 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHH---HhcCCEEeEEEe-cCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEec
Confidence            44568999999999998888775   568998775432 233223444542  1    1            146899987


Q ss_pred             cC
Q 031367          151 NE  152 (161)
Q Consensus       151 ~~  152 (161)
                      +.
T Consensus       148 n~  149 (233)
T PLN02367        148 NW  149 (233)
T ss_pred             CC
Confidence            64

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=84.54  E-value=6.5  Score=27.39  Aligned_cols=52  Identities=12%  Similarity=0.128  Sum_probs=34.3

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC---CCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD---G~~IEl~~~~  152 (161)
                      .+.|+++.|+|++++.+-.+   +-.|.++.....      ...+|++.++   .+.|++....
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~---~vlGl~~~~~~~------~~~~~~~~~~~~~~~~i~l~~~~   57 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYR---DRLGFRVSDRFK------GRGAFLRAAGGGDHHNLFLIKTP   57 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHH---HhcCCEEEEEec------CcEEEEECCCCCCCcEEEEecCC
Confidence            57899999999998887775   457888653211      1235665542   3577776543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=84.37  E-value=7.4  Score=26.74  Aligned_cols=52  Identities=12%  Similarity=0.139  Sum_probs=35.4

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECC--CCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP--DGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DP--DG~~IEl~~~~  152 (161)
                      +.|+.+.|+|++++.+-..   +..|.++......     ....|+..+  .+..+++++..
T Consensus         2 i~hv~l~v~D~~~s~~FY~---~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~   55 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYR---DVLGFTVTDRGPL-----GGLVFLSRDPDEHHQIALITGR   55 (134)
T ss_pred             eeEEEEEecCHHHHHHHHH---HhcCCEEEeeccC-----CcEEEEEecCCCceEEEEEecC
Confidence            6799999999999888775   4589886643211     134565544  35678887654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PF02676 TYW3: Methyltransferase TYW3; InterPro: IPR003827 The methyltransferase TYW3 (tRNA-yW- synthesising protein 3) has been identified in yeast to be involved in wybutosine (yW) biosynthesis []

Probab=84.20  E-value=0.31  Score=37.77  Aligned_cols=25  Identities=24%  Similarity=0.124  Sum_probs=19.1

Q ss_pred             CceeeeecCCceEEEEecCCceeec
Q 031367            2 PALFSLLSNSGSIVVVIKSAYSLLF   26 (161)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~   26 (161)
                      |-.|..|||+||+.+|..+.+..++
T Consensus        39 ~~~~TTSSCSGRI~vf~~~~~~~~k   63 (205)
T PF02676_consen   39 PDYVTTSSCSGRISVFDEGEKPWDK   63 (205)
T ss_dssp             TTEEEEEEES-EEEEEEE-SSTTSC
T ss_pred             CCeEEeccccceEEEEecccccccc
Confidence            5689999999999999998665555

yW is a complexly modified guanosine residue that contains a tricyclic base and is found at the 3'-position adjacent the anticodon of phenylalanine tRNA. TYW3 is an N-4 methylase that methylates yW-86 to yield yW-72 in an Ado-Met-dependent manner [].; PDB: 1TLJ_A 2DVK_A 2IT3_B 2IT2_A 2DRV_A 2QG3_B.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=83.44  E-value=8.8  Score=26.67  Aligned_cols=57  Identities=11%  Similarity=0.196  Sum_probs=33.4

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +++|+++.|+|++++.+-..   .-.|.+................++. -+|.+|++.+..
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~   60 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQ---NIFNAREVYSSGDKTFSLSKEKFFL-IGGLWIAIMEGD   60 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHH---HHhCCeeEEecccccccccceeEEE-cCCeEEEEecCC
Confidence            68999999999999888775   4578765433221110001111222 235778887543

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.10  E-value=14  Score=26.25  Aligned_cols=58  Identities=16%  Similarity=0.048  Sum_probs=36.8

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccC--------C--CceEEEEEE---CCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--------G--LNTKITSFV---DPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~--------~--~~~~~~f~~---DPDG~~IEl~~~~  152 (161)
                      .+.|+++.|.|+++.++--+   +..|.+..+......        .  +....+|+.   +..+..+||....
T Consensus         2 ~~~Hv~irV~DlerSi~FY~---~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~   72 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYR---EVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNY   72 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHH---HhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecC
Confidence            36799999999998888775   568998765331111        0  111223443   3457789999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=82.46  E-value=8.1  Score=27.02  Aligned_cols=53  Identities=15%  Similarity=0.098  Sum_probs=34.8

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++|+.+.|+|++++.+-.+   +..|.++...... +  ....+++.+ ++..++|.++.
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~---~vLGf~~~~~~~~-~--~~~~~~~~~-g~~~l~l~~~~   53 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFS---TKLGFEPVAYHGS-E--DKASYLLRQ-GDINFVLNSPL   53 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHH---HhcCCeEEEecCC-C--ceEEEEEEc-CCEEEEEecCC
Confidence            4799999999999888875   4589987643221 1  123454543 45667877643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=81.67  E-value=6.1  Score=28.46  Aligned_cols=47  Identities=17%  Similarity=0.065  Sum_probs=30.2

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccC-CCceEEEEEECCCC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP-GLNTKITSFVDPDG  143 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~-~~~~~~~f~~DPDG  143 (161)
                      +.|+++.|+|++++.+-..   +..|.++...... + ....+.+|++-.+|
T Consensus         2 i~Hv~l~V~Dle~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~~l~~~~~   49 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYT---ETFGLKPSDVIYL-PGPGNPVAAFLRLDRG   49 (153)
T ss_pred             ccEEEEecCCHHHHHHHHH---HhcCCeEEeeEec-CCCCCcEEEEEecCCC
Confidence            5799999999998877775   5789887543211 1 11134566654444

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=80.64  E-value=10  Score=27.35  Aligned_cols=58  Identities=16%  Similarity=0.272  Sum_probs=36.2

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcc-cC-CCceEEEEEE-CCCCCEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS-IP-GLNTKITSFV-DPDGWKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~-~~-~~~~~~~f~~-DPDG~~IEl~~~  151 (161)
                      .++.|+++.|+|++++.+-..   ...|.++...... .+ ......+|++ ++..+.|++.+.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~---~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~   68 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYR---DVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG   68 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHH---HccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC
Confidence            468999999999999887775   4588886532111 01 1123455554 455677777554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	161
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		7e-23
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		1e-14
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-06
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		4e-06
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		4e-06
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		4e-06
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		2e-05

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 12/129 (9%)
Query: 33  LNDVVFVGSLQ--------ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 84
           L+ ++ VG LQ         LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63
Query: 85  TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 144
            +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGY 119
Query: 145 KTVLVDNED 153
           K  L++ +D
Sbjct: 120 KIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
Query: 28  PKDLPLNDVVFVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 79
           P    L+ ++ VG L        + LGMK+LR  D PE KYTL  LGY  E  +TVLELT
Sbjct: 5   PSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELT 64
Query: 80  YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ--PGSIPGLNTKITS 137
           YNYGVT Y    AY  +AI  +DV           +EL   + +   P      +  +  
Sbjct: 65  YNYGVTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAF 113
Query: 138 FVDPDGWKTVLVDNEDFLKEIQSE 161
            VDPDG+   L++ +  +++ +++
Sbjct: 114 VVDPDGYYIELLNEKTMMEKAEAD 137

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 37/138 (26%)
Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE- 86
           + LG+ LL+ +D P  K++L  L Y +++               +   LELT+N+G  + 
Sbjct: 51  RVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD 110
Query: 87  ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKIT 136
               Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     
Sbjct: 111 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL----- 161
Query: 137 SFV-DPDG-WKTVLVDNE 152
           +F+ DPDG W  +L  N+
Sbjct: 162 AFIQDPDGYWIEILNPNK 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 37/138 (26%)
Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE- 86
           + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  + 
Sbjct: 54  RVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD 113
Query: 87  ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKIT 136
               Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     
Sbjct: 114 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL----- 164
Query: 137 SFV-DPDG-WKTVLVDNE 152
           +F+ DPDG W  +L  N+
Sbjct: 165 AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 37/138 (26%)
Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE- 86
           + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  + 
Sbjct: 50  RVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD 109
Query: 87  ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKIT 136
               Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     
Sbjct: 110 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL----- 160
Query: 137 SFV-DPDG-WKTVLVDNE 152
           +F+ DPDG W  +L  N+
Sbjct: 161 AFIQDPDGYWIQILNPNK 178

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 37/138 (26%)
Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE- 86
           + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  + 
Sbjct: 50  RVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD 109
Query: 87  ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKIT 136
               Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     
Sbjct: 110 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL----- 160
Query: 137 SFV-DPDG-WKTVLVDNE 152
           +F+ DPDG W  +L  N+
Sbjct: 161 AFIQDPDGYWIEILNPNK 178

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 45  LGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAY 93
           LGMK+LR            + P + K++  M+G+  ED   V ELTYNYGV +Y  GN +
Sbjct: 49  LGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDF 108
Query: 94  AQVAISTDDVYKSAEVVNLVTQELGGKI--TRQPGS 127
             + +++     +A  +     E+   +  T  PG 
Sbjct: 109 MGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGG 144

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	5e-29
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	4e-28
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-17
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	6e-13
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	7e-13
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	4e-12
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	4e-10
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-09
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-08
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	4e-08
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-07
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	5e-06

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  102 bits (257), Expect = 5e-29
 Identities = 51/117 (43%), Positives = 76/117 (64%), Gaps = 6/117 (5%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+
Sbjct: 22  KVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN 81

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDNEDFLKEI 158
             ++ E +    ++ GG +TR+ G + G  T I  FV DPDG+K  L++ +D  + +
Sbjct: 82  AAEACEKI----RQNGGNVTREAGPVKGGTTVIA-FVEDPDGYKIELIEEKDAGRGL 133

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  100 bits (251), Expect = 4e-28
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT Y    AY  +AI  +D
Sbjct: 28  ERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVED 87

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 161
           V +    +    ++    I  +  S       +   VDPDG+   L++ +  +++ +++
Sbjct: 88  VKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYYIELLNEKTMMEKAEAD 137

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 32/141 (22%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE- 86
           + LG+ LL+ +D P  K++L  L Y +++               +   LELT+N+G  + 
Sbjct: 51  RVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD 110

Query: 87  ----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF 138
               Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F
Sbjct: 111 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAF 163

Query: 139 V-DPDGWKTVLVDNEDFLKEI 158
           + DPDG+   +++       I
Sbjct: 164 IQDPDGYWIEILNPNKIATII 184

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 61.8 bits (150), Expect = 6e-13
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 9/102 (8%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK--GNAYAQVAIST 100
            +L +KLL   D P     +A L   E     +  L+    + ++ +  G     +AI  
Sbjct: 28  GSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGV 87

Query: 101 DDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDP 141
             + +  + V    +E G + I  +P   PG      +F+ P
Sbjct: 88  KSIEERIQEV----KENGVQMINDEPV--PGARGAQVAFLHP 123

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 61.1 bits (148), Expect = 7e-13
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + L +K +    +    Y   M G         LE T   G +     +  + +     +
Sbjct: 31  EGLCLKRIGEFSQH-NGYDGVMFGL--PHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPN 87

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
             + A + + + + +G +        P  +    +  DPDGW+ V ++++
Sbjct: 88  AVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFMNSK 134

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 59.0 bits (143), Expect = 4e-12
 Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 11/106 (10%)

Query: 44  ALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY---TKGNAYAQVAIST 100
            LG ++   V  PE+  ++  +         +  L  +  +  +    K      + I  
Sbjct: 26  ILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIEV 85

Query: 101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV---DPDG 143
           D++  +   +    ++   +   +   I      +  F+   D  G
Sbjct: 86  DNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVI-FLHPKDCGG 126

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 54.1 bits (130), Expect = 4e-10
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 24/122 (19%)

Query: 37  VFVGSLQA--------LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 88
           ++V  L          L   +    + P+    LA +        T+L +    G  E  
Sbjct: 12  LYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEEAL 61

Query: 89  KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL 148
           K     Q     D + K    +    +E G +I R P  +P    +  +    DG     
Sbjct: 62  KPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEY 115

Query: 149 VD 150
           V+
Sbjct: 116 VE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 51.3 bits (123), Expect = 4e-09
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 14/105 (13%)

Query: 45  LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGNAYAQVAIS 99
             ++    V     K  +  +          +EL    G          KG+    +   
Sbjct: 29  GYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGSTPYHICYE 84

Query: 100 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 143
            +D+ KS E +     ++G  + ++    P ++ +  +F+   D 
Sbjct: 85  VEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDI 125

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 49.0 bits (117), Expect = 3e-08
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 12/108 (11%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGY----AEEDQTTVLELTYNYGVTEYTKGNAYAQ--- 95
             LG +++R   +P+       L       E     + +  Y       +          
Sbjct: 25  NQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRH 84

Query: 96  VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 143
           +A   +DV  S + +      LG ++            K+  F DPDG
Sbjct: 85  LAFYVEDVEASRQEL----IALGIRVEEVRYD-DYTGKKMAFFFDPDG 127

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 9/101 (8%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
            A G  +    + P+  Y++   G   E          N G+ +  +      V +  + 
Sbjct: 45  DAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTTPV-VTVDVES 100

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 143
           +  + E +    + LGGK       +  +      F D +G
Sbjct: 101 IESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 12/104 (11%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY---GVTEYTKGNAYAQVAIS 99
           + LG ++LR   +PE       L          LE+  +        Y +      +A  
Sbjct: 25  EKLGFEVLRENHRPEKNDIKLDLKLGS----QELEIFISDQFPARPSYPEALGLRHLAFK 80

Query: 100 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 143
            + + +    +     E G +             K+T F DPDG
Sbjct: 81  VEHIEEVIAFL----NEQGIETEPLRVD-DFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 44.2 bits (104), Expect = 5e-06
 Identities = 19/103 (18%), Positives = 29/103 (28%), Gaps = 18/103 (17%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN--AYAQVAIST 100
             +G+            Y +   G AE             G  E        +  V  + 
Sbjct: 184 AVVGLTHSSMEIAAGQNYRVLKAGDAEV-----------GGCMEPPMPGVPNHWHVYFAV 232

Query: 101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 143
           DD   +A          GG++  +P  IP    +     DP G
Sbjct: 233 DDADATAAKA----AAAGGQVIAEPADIPS-VGRFAVLSDPQG 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.8
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.78
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.78
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.77
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.77
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.76
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.76
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.75
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.73
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.73
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.72
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.71
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.7
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.68
3ghj_A	141	Putative integron gene cassette protein; integron	99.67
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.66
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.66
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.65
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.65
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.63
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.63
2i7r_A	118	Conserved domain protein; structural genomics cons	99.63
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.63
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.61
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.61
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.61
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.61
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.61
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.6
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.6
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.6
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.6
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.6
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.59
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.59
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.58
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.58
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.57
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.57
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.57
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.57
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.56
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.56
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.56
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.56
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.56
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.55
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.55
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.53
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.53
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.49
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.49
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.48
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.48
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.47
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.47
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.44
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.42
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.41
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.4
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.4
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.39
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.39
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.36
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.35
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.35
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.35
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.33
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.32
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.32
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.31
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.31
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.31
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.31
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.3
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.29
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.29
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.28
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.26
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.26
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.23
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.17
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.15
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.04
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.03
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.95
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.93
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.83
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.78
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.72
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.7
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.7
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.66
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.13
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.89
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.68
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	96.24
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	94.83
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	94.73
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	94.68
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	94.66
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.19
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	94.08
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	93.91
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	93.63
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.4
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	93.32
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	92.42
2p25_A	126	Glyoxalase family protein; structural genomics, MC	91.56
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	91.4
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	91.03
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	90.38
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	89.65
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	88.58
3ghj_A	141	Putative integron gene cassette protein; integron	87.5
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	87.4
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	87.21
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	87.09
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	84.96
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	83.93
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	83.45
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	83.24
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	83.0
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	82.51
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	81.69
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	81.62
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	80.25
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	80.14

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=4.5e-20  Score=129.33  Aligned_cols=120  Identities=44%  Similarity=0.800  Sum_probs=92.7

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      |+++|+. .|+|+        ++|||++..+...+++.+.++++..++......++|...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            5799999 99999        89999998876655566777788765422346788865443322334457889999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |+++++++|    +++|+++..+|...+++..+.+||+|||||.|||++....
T Consensus        81 d~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999    5999999988877766545789999999999999997653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.81  E-value=2.9e-19  Score=129.75  Aligned_cols=120  Identities=18%  Similarity=0.181  Sum_probs=83.0

Q ss_pred             eecCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc---cc---c
Q 031367           24 LLFNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---EY---T   88 (161)
Q Consensus        24 ~~~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~---~~---~   88 (161)
                      +......|+|+||+ .|+|+        ++|||++..+....+  ..+..+..+.......+.+ ......   +.   .
T Consensus        18 l~~~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~   94 (155)
T 4g6x_A           18 LYFQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLL-EPSSHAAVTPFKEAL   94 (155)
T ss_dssp             -----CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEE-EECCSTTHHHHHHHH
T ss_pred             ceeccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEe-ccCCCcccccccccc
Confidence            33344567999999 99999        999999987765544  3333444333222222322 222211   11   1


Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .+.+..|++|.|+|+++++++|    +++|+++..+|...++  ++.+||+|||||+|||+|..
T Consensus        95 ~~~g~~~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           95 VADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             HHTTCCSEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             ccCCceEEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            2346789999999999999999    6999999999988776  48899999999999999963

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.80  E-value=2.4e-18  Score=119.56  Aligned_cols=114  Identities=21%  Similarity=0.245  Sum_probs=86.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeee-------CCCc---ccc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-------YGVT---EYT   88 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~-------~~~~---~~~   88 (161)
                      |+..+++|++ .|+|+        ++|||++..+...+++....+++..++    ..++|+.+       ....   ..+
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCC
Confidence            4568999999 99999        899999988876555444456676553    57888652       1111   112


Q ss_pred             -cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           89 -KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        89 -~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                       .+.+..|++|.|+|+++++++|    +++|+++...|...+++ .+.+||+|||||.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence             3457889999999999999999    59999998776654443 588999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.79  E-value=1.3e-18  Score=122.04  Aligned_cols=115  Identities=17%  Similarity=0.156  Sum_probs=85.9

Q ss_pred             CCCcceeEEE-eeCCc-------cccCCEEEEEE-eCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-c----ccCCCe
Q 031367           28 PKDLPLNDVV-FVGSL-------QALGMKLLRTV-DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-Y----TKGNAY   93 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~-~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~----~~g~g~   93 (161)
                      .|.++++|++ .|+|+       .+|||++..+. ..+..+...+|+..+    ...|+|+....... .    ..+.++
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~   78 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTP   78 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCce
Confidence            4678999999 99999       78999986542 223334566777754    46789875433221 1    115678


Q ss_pred             eEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEec
Q 031367           94 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        94 ~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +||||.|+|+++++++|    +++|+++..+|...  .++ .+.+||+|||||+|||+|.
T Consensus        79 ~hiaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g-~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           79 YHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDN-RKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTT-EEEEEEEETTTEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCccccCCeecccCCC-ceEEEEECCCceEEEEecC
Confidence            89999999999999999    59999998765432  232 5889999999999999984

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.78  E-value=4.4e-18  Score=126.44  Aligned_cols=122  Identities=28%  Similarity=0.523  Sum_probs=95.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCC---------------ceEEEEeeeCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQ---------------TTVLELTYNYG   83 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~---------------~~~leL~~~~~   83 (161)
                      ...++++|++ .|+|+        ++|||++..+...+.+.+.+++++.++...               ...++|+..+.
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            3568999999 99999        999999998877767778888888654210               36788876554


Q ss_pred             Cc-----cccc----CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           84 VT-----EYTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        84 ~~-----~~~~----g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ..     .+..    ..++.||+|.|+|+++++++|    +++|+++..+|...++  .+++||+|||||.|||+++...
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~  183 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKM  183 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGS
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccc
Confidence            22     1111    237889999999999999999    5999999988875544  3478999999999999998654


Q ss_pred             h
Q 031367          155 L  155 (161)
Q Consensus       155 ~  155 (161)
                      .
T Consensus       184 ~  184 (187)
T 3vw9_A          184 A  184 (187)
T ss_dssp             G
T ss_pred             c
Confidence            3

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.78  E-value=7.6e-18  Score=120.22  Aligned_cols=116  Identities=40%  Similarity=0.597  Sum_probs=86.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |+..+++|+. .|+|+        ++|||++..+...+++.+.++++..++......|+|.........+.+.+..|++|
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f   83 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAI   83 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEE
Confidence            5678999999 99999        89999998876544455666777765321246788865433222333457889999


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+|+++++++|    +++|+++..+     ++....+||+|||||.|||++..
T Consensus        84 ~v~d~~~~~~~l----~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           84 GVEDVKELVADM----RKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EESCHHHHHHHH----HHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHH----HHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            999999999999    5999998754     33233459999999999999974

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.77  E-value=2.4e-18  Score=119.53  Aligned_cols=115  Identities=18%  Similarity=0.182  Sum_probs=85.3

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCccc-------ccCCC
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-------TKGNA   92 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~-------~~g~g   92 (161)
                      |..+++|++ .|+|+        ++|||++..+...++.+...+++..+    ...++|+........       ....+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCC
Confidence            567899999 99999        89999998765544445666777765    356888654332211       12457


Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEE--ECCCCCEEEEEec
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDN  151 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~--~DPDG~~IEl~~~  151 (161)
                      ..||+|.|+|+++++++|    +++|+++..+|...+....+.+|+  +|||||.|||+|.
T Consensus        78 ~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            899999999999999999    699999877654333323456776  8999999999973

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.77  E-value=3.4e-18  Score=118.48  Aligned_cols=111  Identities=19%  Similarity=0.250  Sum_probs=86.0

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc--cccCCCeeEEEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS   99 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~--~~~g~g~~Hiaf~   99 (161)
                      |+++|++ .|+|+        ++|||++..+...+.+++..+|+..++   ...|+|........  ...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            7899999 99999        999999977654444456677777643   46788865443221  1234577899999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      |+|   +++++++|    +++|+++..+|...+++ .+.+||+|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            999   77899998    69999999888766554 57899999999999997

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.77  E-value=1.9e-17  Score=115.37  Aligned_cols=115  Identities=19%  Similarity=0.212  Sum_probs=86.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +|..+++|+. .|+|+        ++|||++..+...+.+ ..++.+..++  ....++|.............+..|++|
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~   85 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISL   85 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEE
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEE
Confidence            5778999999 99999        9999999887653332 3334455432  245677753221101112346789999


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .|+|+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||+|
T Consensus        86 ~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           86 ITRDIDEAYKTL----TERGVTFTKPPEMMPWG-QRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EESCHHHHHHHH----HHTTCEESSSCEECTTS-CEEEEEECTTCEEEEEEE
T ss_pred             EeCCHHHHHHHH----HHCCCEeecCCCcCCCC-CEEEEEECCCCCEEEEEe
Confidence            999999999999    59999999888887775 489999999999999987

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.76  E-value=6.8e-18  Score=123.16  Aligned_cols=117  Identities=19%  Similarity=0.245  Sum_probs=89.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-c-----ccCCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-Y-----TKGNA   92 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~-----~~g~g   92 (161)
                      +++.+++||+ .|+|+        ++|||++..+...++++..++++..+    ...|+|+....... .     ..+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCC
Confidence            4568999999 99999        89999998876655556677788765    36788875433221 1     23468


Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecC-CcccCCCceEEEEE--ECCCCCEEEEEecCC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVDNED  153 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~-p~~~~~~~~~~~f~--~DPDG~~IEl~~~~~  153 (161)
                      +.||||.|+|+++++++|    +++|+++..+ |...+++ .+.+|+  +|||||.|||++...
T Consensus        80 ~~Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEV----KENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCC
T ss_pred             eEEEEEEECCHHHHHHHH----HHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCC
Confidence            899999999999999999    6999998876 5544333 467777  499999999999854

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.76  E-value=1.9e-17  Score=114.10  Aligned_cols=113  Identities=19%  Similarity=0.214  Sum_probs=82.0

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCc---ccccCCCee
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYA   94 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~---~~~~g~g~~   94 (161)
                      ||..+++|++ .|+|+        ++|||++..+...++ +.+. +++..++    ..++|+......   ..+.+.+..
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~   75 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGS----QELEIFISDQFPARPSYPEALGLR   75 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETT----EEEEEEECTTCCCCCCSSCCSSCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCC----eEEEEEeccCCCCCCCCCCCccce
Confidence            5678999999 99999        899999987643322 2333 3455443    368886432211   112235778


Q ss_pred             EEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           95 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        95 Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      |++|.|+|+++++++|    +++|+++...|...+++ .+.+||+|||||.|||+|
T Consensus        76 ~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           76 HLAFKVEHIEEVIAFL----NEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CEEEECSCHHHHHHHH----HHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EEEEEeCCHHHHHHHH----HHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            9999999999999999    59999988666544443 588999999999999985

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.75  E-value=3.2e-17  Score=116.96  Aligned_cols=117  Identities=15%  Similarity=0.184  Sum_probs=86.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCC-----------CCcEEEEEeeccCCCCceEEEEeee--CCCc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYN--YGVT   85 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~-----------~g~~~~~~l~~~~~~~~~~leL~~~--~~~~   85 (161)
                      ++..+++|++ .|+|+        + |||++..+....           ......+++..++  +...|+|+..  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCc
Confidence            3557899999 99999        7 999998765421           1235567777543  2367888642  1111


Q ss_pred             -----ccccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           86 -----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        86 -----~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                           ....+.++.||+|.|+|+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||+++.
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEecc
Confidence                 0112346789999999999999999    59999999888766553 68899999999999999874

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.73  E-value=4.2e-17  Score=115.70  Aligned_cols=120  Identities=15%  Similarity=0.162  Sum_probs=87.5

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCC--CCceEEEEeeeCCCc-c-----cccC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVT-E-----YTKG   90 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~--~~~~~leL~~~~~~~-~-----~~~g   90 (161)
                      .|..+++|+. .|+|+        ++|||++..+...++.+...+++..++.  ..+..|+|+...... .     ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4678999999 99999        8999999877655444556677776531  012678886543321 1     1133


Q ss_pred             --CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeee-cCCcccCCCceEEEEE--ECCCCCEEEEEecC
Q 031367           91 --NAYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  152 (161)
Q Consensus        91 --~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~-~~p~~~~~~~~~~~f~--~DPDG~~IEl~~~~  152 (161)
                        .++.|++|.|+|+++++++|    +++|+++. ..|...+++ .+.+|+  +|||||.|||++..
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecC
Confidence              57789999999999999999    59999988 456543443 466777  99999999999874

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.73  E-value=9.6e-17  Score=119.13  Aligned_cols=123  Identities=27%  Similarity=0.525  Sum_probs=91.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCC---------------CCceEEEEeeeCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYG   83 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~leL~~~~~   83 (161)
                      +..++++|++ .|+|+        ++|||++..+...+++.+.+++++.++.               .+...|+|+....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            4578999999 99999        8999999887654444577777775320               0246788865433


Q ss_pred             Cc-----ccc----cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           84 VT-----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        84 ~~-----~~~----~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ..     .+.    ...+..||+|.|+|+++++++|    +++|+++..+|...++  .+.+||+|||||.|||++...+
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence            11     011    1247789999999999999999    5999999988775443  3579999999999999998766


Q ss_pred             hh
Q 031367          155 LK  156 (161)
Q Consensus       155 ~~  156 (161)
                      .+
T Consensus       181 ~~  182 (184)
T 2za0_A          181 AT  182 (184)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.73  E-value=4.8e-17  Score=114.84  Aligned_cols=114  Identities=17%  Similarity=0.126  Sum_probs=84.5

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC--ccc-ccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--TEY-TKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~--~~~-~~g~g~~H   95 (161)
                      |+..+++|+. .|+|+        ++|||++..+....++.+..+++. +    ...|+|......  ..+ ....+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcce
Confidence            4668899999 99999        899999988765443346656665 3    367888644322  111 12356789


Q ss_pred             EEEEe---CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           96 VAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        96 iaf~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++|.|   +|+++++++|    +++|+++. +|...++  ++.+||+|||||+|||++...
T Consensus        76 ~~f~v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEEESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            99999   8899999999    59999987 4544444  488999999999999999753

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.72  E-value=2.1e-17  Score=119.74  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=87.4

Q ss_pred             cCCCCcceeEEE-eeCCc--------cccCCEEEEEEeCC--------------CCcEEEEEeeccCCCCceEEEEeeeC
Q 031367           26 FNPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNY   82 (161)
Q Consensus        26 ~~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~--------------~g~~~~~~l~~~~~~~~~~leL~~~~   82 (161)
                      +.++..+|+||+ .|+|+        ++|||++..+...+              .....++++..+    ...|+|+...
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~   88 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPD   88 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEEC
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEEC
Confidence            346789999999 99999        89999986554332              134666777754    3679997543


Q ss_pred             CCcc-c-----ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC--CCEEEEEec
Q 031367           83 GVTE-Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVDN  151 (161)
Q Consensus        83 ~~~~-~-----~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD--G~~IEl~~~  151 (161)
                      .... +     ..+.|++||||.|+|+++++++|    +++|+++..++..  + ..+++||+|||  |+.|||+|+
T Consensus        89 ~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~~--~-g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           89 ENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGDF--E-GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEE--T-TEEEEEESCHHHHSSEEEEEEE
T ss_pred             CCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeecccc--C-CeeEEEEeccccCcEEEEEEec
Confidence            3221 1     13568999999999999999999    5999998766432  2 26899999999  999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.70  E-value=8.5e-17  Score=114.90  Aligned_cols=115  Identities=18%  Similarity=0.166  Sum_probs=84.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeC--------CCCcEEEEEeeccCCCCceEEEEeeeCCCc-----
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDK--------PEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----   85 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~--------~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-----   85 (161)
                      ++..+|+||+ .|+|+        ++|||++..+...        ..+.+  +++..++   ...++|.......     
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~   89 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD---GTILDLFGEPELSPPDPN   89 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT---SCEEEEEECTTCCCSSSS
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC---CCEEEEEecCCCCcCCCC
Confidence            5678999999 99999        8999999763211        12233  4555443   3668886433211     


Q ss_pred             ccccCCCeeEEEEEeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           86 EYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        86 ~~~~g~g~~Hiaf~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ......+..|++|.|+  |+++++++|    +++|+++..+|...++  ++.+||+|||||.|||++...
T Consensus        90 ~~~~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           90 PEKTFTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             TTCCCSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            1112357889999999  999999999    6999999888876655  469999999999999999764

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=1.8e-16  Score=128.72  Aligned_cols=111  Identities=29%  Similarity=0.457  Sum_probs=89.5

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCC-----------CCcEEEEEeeccCCCCceEEEEeeeCCCccc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEY   87 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~-----------~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~   87 (161)
                      |++++++||+ .|+|+        ++|||++..+....           +++|..+++++++......++|+.+++...+
T Consensus        23 M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~  102 (330)
T 3zi1_A           23 MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDY  102 (330)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCC
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcc
Confidence            6678999999 99999        99999998877655           4578888888765545678999876654445


Q ss_pred             ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           88 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        88 ~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ..++++.||||.|+|+   ++++    +++|+++...|       .+.+||+|||||.|||++..
T Consensus       103 ~~~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~-------~~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          103 KLGNDFMGITLASSQA---VSNA----RKLEWPLTEVA-------EGVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CBCSSEEEEEEECHHH---HHHH----HHHTCCCEEEE-------TTEEEEECTTSCEEEEESSC
T ss_pred             ccCCCeeEEEEECchH---HHHH----HHcCCceeccC-------CceEEEECCCCCEEEEEecC
Confidence            5567899999999998   4566    58999988654       13799999999999999975

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.68  E-value=3.2e-16  Score=109.07  Aligned_cols=112  Identities=21%  Similarity=0.191  Sum_probs=81.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc---ccccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~---~~~~g~g~~H   95 (161)
                      |+..+++|++ .|+|+        ++|||++..+.   . .+  +++..+    ...++|.......   ......+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG----HQKINLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET----TEEEEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC----CEEEEEEcCCCCccccCCCCCCCccE
Confidence            4567999999 99999        89999998762   2 23  344443    2556674322211   1113346789


Q ss_pred             EEEEeCC-HHHHHHHHhHHHHhcCCeeecCCcccCCCc--eEEEEEECCCCCEEEEEecCC
Q 031367           96 VAISTDD-VYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        96 iaf~V~D-i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~--~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++|.|+| +++++++|    +++|+++..+|...++..  .+.+||+|||||.|||+++..
T Consensus        76 ~~~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999997 99999999    599999988776554432  378999999999999999753

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.67  E-value=1.3e-15  Score=108.79  Aligned_cols=106  Identities=13%  Similarity=0.147  Sum_probs=78.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |++.+++||+ .|+|+        ++|||++..+..  ++.+.  ++..++  ....|+|... .     ...+..|++|
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~--~~~~~~--~~~~l~l~~~-~-----~~~~~~h~~~   91 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWN--FLWVSG--RAGMVVLQEE-K-----ENWQQQHFSF   91 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEE--EEEETT--TTEEEEEEEC-C-----SSCCCCEEEE
T ss_pred             eeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEE--EEEecC--CCcEEEEecc-C-----CCCCCceEEE
Confidence            5678899999 99999        999999988753  22343  333332  2467888532 1     1235689999


Q ss_pred             EeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           99 STD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        99 ~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .|+  |+++++++|    +++|+++. +|...+++..+.+||+|||||.|||++
T Consensus        92 ~v~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           92 RVEKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EECGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEeHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            998  999999999    59999988 444434444689999999999999986

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.66  E-value=1.5e-15  Score=107.52  Aligned_cols=113  Identities=18%  Similarity=0.267  Sum_probs=80.3

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |.....|++ .|+|+        ++|||++..+... .+.+..++++.++  ....|+|....+......+.+..||+|.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~hi~~~   84 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFY   84 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEE
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCccEEEEE
Confidence            455677888 99999        9999999876543 2346667887653  2355788654332222334567899999


Q ss_pred             eCCH---HHHHHHHhHHHHhcCCeeec--CCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TDDV---YKSAEVVNLVTQELGGKITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~Di---~~~~~~L~~~~~~~Gv~i~~--~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |+|+   ++++++|    +++|+++..  .|....+  +  .||+|||||.|||+++.
T Consensus        85 v~d~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKL----KHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHH----HHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHH----HHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            9999   8999999    599999883  3332222  2  37999999999999863

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.66  E-value=1.5e-15  Score=105.57  Aligned_cols=111  Identities=10%  Similarity=0.064  Sum_probs=79.9

Q ss_pred             cCCCCcceeEEE-ee--CCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCee
Q 031367           26 FNPKDLPLNDVV-FV--GSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYA   94 (161)
Q Consensus        26 ~~~~~~~i~Hv~-~V--~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~   94 (161)
                      ++||..+++|++ .|  +|+        ++|||++..+.....+. ..+|+..+    ...++|......    ...+..
T Consensus         4 m~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~----~~~l~l~~~~~~----~~~~~~   74 (126)
T 2qqz_A            4 MRNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG----NQEIHIGVEQNF----NPAKRA   74 (126)
T ss_dssp             CCCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET----TEEEEEEECTTC----CCCSSS
T ss_pred             hhcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC----CEEEEEEecCCC----CCCCce
Confidence            456778999999 99  899        89999997653211000 01345544    256777533211    123568


Q ss_pred             EEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           95 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        95 Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |++|.|+|+++++++|    +++|+++..+|. . ++ .+.+||+|||||.|||+++.
T Consensus        75 ~~~f~v~d~~~~~~~l----~~~G~~~~~~~~-~-~g-~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           75 HPAFYVLKIDEFKQEL----IKQGIEVIDDHA-R-PD-VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             CEEEEETTHHHHHHHH----HHTTCCCEEECS-S-TT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCCccCCCC-C-CC-eeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999    599999887763 2 33 68899999999999999863

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.65  E-value=1.8e-15  Score=108.62  Aligned_cols=112  Identities=14%  Similarity=0.124  Sum_probs=80.4

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC---cccccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~---~~~~~g~g~~H   95 (161)
                      ++..+++|+. .|+|+        ++|||++..+.   + .+  +++..++    ..++|......   .......+..|
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~h   88 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NR--KALIFGA----QKINLHQQEMEFEPKASRPTPGSAD   88 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TE--EEEEETT----EEEEEEETTBCCSSCCSSCCTTCCE
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-Ce--EEEEeCC----eEEEEeccCCcCCCcCcCCCCCccE
Confidence            5678999999 99999        89999998762   1 23  3455442    56777432111   01112346789


Q ss_pred             EEEEeC-CHHHHHHHHhHHHHhcCCeeecCCcccCCCc--eEEEEEECCCCCEEEEEecCC
Q 031367           96 VAISTD-DVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        96 iaf~V~-Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~--~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++|.+. |+++++++|    +++|+++..+|...+++.  .+.+||+|||||+|||++..+
T Consensus        89 i~f~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           89 LCFITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEEESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEEecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            999998 999999999    599999988776544432  378999999999999999754

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.65  E-value=1e-15  Score=107.73  Aligned_cols=107  Identities=11%  Similarity=0.065  Sum_probs=78.9

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      ..++++|+. .|+|+        ++|||++..+.+    .+.  .+..++   ...+.|.. ..........+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~---~~~l~l~~-~~~~~~~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSSG---DALFAIWS-GGEEPVAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECST---TCEEEEES-SSCCCCTTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcCC---CcEEEEEe-CCCCCcCCCCCcceEEEE
Confidence            447999999 99999        899999976532    232  233222   35677742 221111122456899999


Q ss_pred             eCC---HHHHHHHHhHHHHh---cCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          100 TDD---VYKSAEVVNLVTQE---LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~---~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+|   +++++++|    ++   +|+++..+|...+++  +.+||+|||||+|||+++
T Consensus        80 v~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            987   89999999    58   999999888877664  889999999999999985

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.63  E-value=1.5e-15  Score=107.61  Aligned_cols=109  Identities=17%  Similarity=0.195  Sum_probs=76.8

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEE---EEeeccCCCCceEEEEeeeCCCcccccCCCeeEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV   96 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~---~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi   96 (161)
                      |+.+++|+. .|+|+        ++|||++..+...  ..+..   .++..+    ...|+|..... .  + ..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~-~--~-~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEK-L--A-ERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCC-C--S-SCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCC-C--C-CCCeeEE
Confidence            467899999 99999        8999999876321  11110   034333    35677753211 1  1 3467899


Q ss_pred             EEEeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           97 AISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        97 af~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +|.|+  |+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERV----GKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHH----HHCCCcccCCcccCCCC-eEEEEEECCCCCEEEEEeCC
Confidence            99999  999999999    59999988776554433 57899999999999999964

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.63  E-value=2.6e-15  Score=105.00  Aligned_cols=109  Identities=14%  Similarity=0.153  Sum_probs=77.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEE---EEEeeccCCCCceEEEEeeeCCCcccccCCCeeEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYT---LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV   96 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~---~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi   96 (161)
                      |+.+++|+. .|+|+        ++|||++..+...  ..+.   ..++..+    ...++|..... .   ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~----~~~l~l~~~~~-~---~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGD--KTFSLSKEKFFLIA----GLWICIMEGDS-L---QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSS-C---CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCC--cccccCCceEEEeC----CEEEEEecCCC-C---CCCCeeEE
Confidence            568899999 99999        8899998765321  1111   0133333    25677753211 1   13467899


Q ss_pred             EEEeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           97 AISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        97 af~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +|.|+  |+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERI----KALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             EEECCGGGHHHHHHHH----HHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSS
T ss_pred             EEEcCHHHHHHHHHHH----HHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCC
Confidence            99995  999999999    59999999877654443 57899999999999999975

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.63  E-value=2e-15  Score=103.80  Aligned_cols=105  Identities=21%  Similarity=0.163  Sum_probs=76.0

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      ++++|+. .|+|+        ++|||++.....    .+  +++..++    ..+.|......+....+.+. |++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~~-~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSGI-IIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSCE-EEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCeE-EEEEEEC
Confidence            6899999 99999        899999976431    23  3445432    33444211101111223454 8999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||++.
T Consensus        73 d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRL----NELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            999999999    59999998888877664 5889999999999999975

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.63  E-value=9.9e-16  Score=110.10  Aligned_cols=113  Identities=16%  Similarity=0.091  Sum_probs=82.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-----ccccCCCe
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAY   93 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-----~~~~g~g~   93 (161)
                      ||..+++|+. .|+|+        ++|||++..+.    +.+  +++..+    ...|+|.......     +...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC----CEEEEEEeccccccccCCCCCCCCCe
Confidence            5678999999 99999        89999987653    233  445543    3567775321100     00113456


Q ss_pred             eEEEEEe---CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCch
Q 031367           94 AQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  155 (161)
Q Consensus        94 ~Hiaf~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~  155 (161)
                      .|++|.|   +|+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||++.+.++
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~~  130 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVWP  130 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTSC
T ss_pred             EEEEEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCce
Confidence            7999999   8999999999    59999998888776664 58999999999999999986543

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.61  E-value=1.8e-15  Score=109.05  Aligned_cols=107  Identities=21%  Similarity=0.243  Sum_probs=79.0

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +.++. +. .|+|+        ++|||++..+...++..+.+++++      .  ++|+... .... ...+..|++|.|
T Consensus         5 i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~-~~~~-~~~~~~hl~f~V   73 (144)
T 3r6a_A            5 ILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGS-EEAL-KPFRNTQATFLV   73 (144)
T ss_dssp             EEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESC-HHHH-GGGGGCCEEEEE
T ss_pred             EEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCC-cccC-CCCcceEEEEEe
Confidence            34555 88 99999        999999987755444445544433      1  5554322 1111 122457999999


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +|+++++++|    +++|+++..+|...++  ++.+||+|||||.|||+++.+
T Consensus        74 ~d~d~~~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           74 DSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             SCHHHHHHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9999999999    5999999988887776  388999999999999999854

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.61  E-value=1.7e-14  Score=117.22  Aligned_cols=114  Identities=10%  Similarity=0.062  Sum_probs=84.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      .+.+++|+. .|+|+        ++|||++..+.. +++....+|+..+.  ....+.+.....    ....+++|+||.
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~--~~~~l~~~~~~~----~~~~~~~Hiaf~  222 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNL--LGHEVACMRDMT----GGHGKLHHLAFF  222 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSS--SSCSEEEEECTT----SCCSEEEEEEEE
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCC--CceEEEEeccCC----CCCCceeEEEEE
Confidence            568999999 99999        899999987765 34444556777543  234566653211    123468999999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+|   +++++++|    +++|+++...|.....+..+++||+|||||+|||++..+
T Consensus       223 v~d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          223 YGTGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CCCHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             eCCHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            999   77778888    699999988876433333578999999999999986543

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.61  E-value=5.9e-15  Score=103.92  Aligned_cols=110  Identities=15%  Similarity=0.188  Sum_probs=74.3

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      +...|+||. .|+|+        + |||++..+... .+.+  +++...+   ...++|. ..... .....+..|++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~--~~~~~~~---~~~l~l~-~~~~~-~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSE--VHRAVHN---GVEFSLY-SIQNP-QRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEET---TEEEEEE-ECCCC-SSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCE--EEEEeCC---CeEEEEE-ECCCC-cCCCCCceEEEEE
Confidence            446899999 99999        8 99998765211 1233  3333111   3567663 22221 1122234689999


Q ss_pred             eCCHHHHHHHHhHHHHhcCCe-eecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TDDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~Di~~~~~~L~~~~~~~Gv~-i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+|+++++++|    +++|++ +..+|...+++ .+ +||+|||||+|||.+.++
T Consensus        74 v~dvd~~~~~l----~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           74 ITDLEKTVQEL----VKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             ESCHHHHHHHH----TTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC---
T ss_pred             eCCHHHHHHHH----HHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEecc
Confidence            99999999999    599999 88888877775 45 999999999999999754

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.61  E-value=1.4e-14  Score=100.92  Aligned_cols=105  Identities=13%  Similarity=0.016  Sum_probs=78.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ||.+...|+. .|+|+        ++|||++..+  .  ..+  +++..+    ...+.|......   +.+ +..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~--~--~~~--~~~~~~----~~~l~l~~~~~~---~~~-~~~~~~~   66 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV--E--DDF--AGVVRD----DVTLFISAVQDQ---VVP-DNTQAWV   66 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE--C--SSE--EEEEET----TEEEEEEECSCT---TTG-GGCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEec--C--CCE--EEEEEC----CEEEEEEcCCCC---CCC-CceEEEE
Confidence            4556778999 99999        9999999875  1  233  345543    356777533221   112 3369999


Q ss_pred             EeCCHHHHHHHHhHHHHhc------CC--eeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STDDVYKSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~------Gv--~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+|+++++++|    +++      |+  ++..+|...+++  +.+||+|||||+|||.+..
T Consensus        67 ~v~dv~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           67 WVRGLDELYAEW----SEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EEECHHHHHHHH----TTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             EECCHHHHHHHH----HHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            999999999999    588      99  888888877764  8899999999999999863

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.61  E-value=1.8e-14  Score=102.16  Aligned_cols=106  Identities=24%  Similarity=0.252  Sum_probs=78.5

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-ccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~~~~g~g~~Hiaf   98 (161)
                      |+.+++|+. .|+|+        ++|||++..+..  .  .  +|+..+    ...++|....... ......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEE
Confidence            567899999 99999        899999987642  1  2  345544    2457775332111 1122346789999


Q ss_pred             EeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+  |+++++++|    +++|+++..+|..    ..+.+||+|||||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence            997  999999999    5999999876642    258899999999999999975

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.60  E-value=2.2e-14  Score=101.24  Aligned_cols=112  Identities=15%  Similarity=0.107  Sum_probs=76.3

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      +.--+.. .|+|+        ++|||++..+.+    .+  +++..+    ...|+|.........+.+.+..|++|.|+
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~   75 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS----NY--AYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVS   75 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET----TEEEEEEECCCC---------EEEEEECS
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC----Ce--EEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeC
Confidence            4455566 99999        899999987742    23  455544    35677754332211122223369999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+++++++|.+...+.|+++..+|...+++ .+.+||+|||||.|||.+...
T Consensus        76 dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           76 DIDSLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECC
T ss_pred             CHHHHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEccc
Confidence            999999999533334566777778777764 689999999999999999753

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.60  E-value=2.2e-15  Score=109.70  Aligned_cols=115  Identities=10%  Similarity=0.082  Sum_probs=81.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC-------c-ccccC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-------T-EYTKG   90 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~-------~-~~~~g   90 (161)
                      ++..+++|++ .|+|+        ++|||++..+...   ..  +|+..++    ..+.|......       . ....+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~--~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QL--VFFKCGR----QMLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TE--EEEEETT----EEEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cE--EEEeCCC----EEEEEEecCCccCccccCCCCcCCC
Confidence            4568999999 99999        8999999877532   22  3444432    45666421110       0 01123


Q ss_pred             CCeeEEEEEe---CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchhh
Q 031367           91 NAYAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  157 (161)
Q Consensus        91 ~g~~Hiaf~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~~  157 (161)
                      .+..|++|.|   +|+++++++|    +++|+++..++.. +++ .+.+||+|||||.|||+++..+...
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~g-~~~~~~~DPdG~~iel~~~~~~~~d  138 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PNG-SYSVYIRDPAGNSVEVGEGKLWGFE  138 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TTS-CEEEEEECTTCCEEEEEEGGGGTCC
T ss_pred             cceeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cCC-cEEEEEECCCCCEEEEEeCCCCCcc
Confidence            4678999999   8899999999    6999998755433 222 6899999999999999998765443

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.60  E-value=1.7e-14  Score=101.61  Aligned_cols=105  Identities=23%  Similarity=0.195  Sum_probs=78.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |+.+++|+. .|+|+        ++|||++..+..  .  .  .|+..+    ...|+|......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG----SLWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C--c--eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEE
Confidence            467899999 99999        899999987642  2  1  345544    245777533211  1123467899999


Q ss_pred             eC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+  |+++++++|    +++|+++..+|..    .++.+||+|||||.|||++...
T Consensus        69 v~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           69 IAAADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             ECHHHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             ccHHHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence            98  999999999    6999999877643    2578999999999999998754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.60  E-value=3.7e-15  Score=107.66  Aligned_cols=114  Identities=14%  Similarity=0.075  Sum_probs=76.6

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCccc-ccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~-~~g~g~~Hiaf   98 (161)
                      |.++++|+. .|+|+        ++|||++..+.  +  .+  +++..++   ...+.|......... ....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~--~~--~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS--P--TF--AMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEEC--S--SE--EEEECTT---SCEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccC--C--CE--EEEEcCC---CcEEEEecCCcCCccccCCCCeEEEEE
Confidence            457899999 99999        89999997663  1  23  3444322   356777432211111 12234579999


Q ss_pred             EeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchhh
Q 031367           99 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  157 (161)
Q Consensus        99 ~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~~  157 (161)
                      .|+|   +++++++|    +++|+++..+|...++  ++.+||+|||||+|||++...-..+
T Consensus        74 ~v~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~a~~  129 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQW----SDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKRTAEN  129 (148)
T ss_dssp             ECSCHHHHHHHHHHH----HHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC-----
T ss_pred             EcCCHHHHHHHHHHH----HhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcChhHhh
Confidence            9987   88999998    6999999988887777  3889999999999999998654443

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.60  E-value=2e-14  Score=101.36  Aligned_cols=110  Identities=15%  Similarity=0.009  Sum_probs=79.0

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-cccCCCee-EEEEEeCC
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYA-QVAISTDD  102 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~~~g~g~~-Hiaf~V~D  102 (161)
                      -.+. .|+|+        ++|||++..+...+ +....+.+..+    ...|.|........ ...+.... |++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            3577 99999        89999998876544 43333455543    24566643222111 11222234 99999999


Q ss_pred             HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       103 i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +++++++|    +++|+++..+|...+++ .+.+||+|||||.|||+++..
T Consensus        79 v~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRS----TAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHH----HHcCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEcC
Confidence            99999999    69999999888877765 689999999999999999853

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.59  E-value=3.8e-15  Score=105.34  Aligned_cols=111  Identities=15%  Similarity=0.051  Sum_probs=79.6

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCC-----Cc-ccccCCCe
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG-----VT-EYTKGNAY   93 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~-----~~-~~~~g~g~   93 (161)
                      |.++++|+. .|+|+        + |||++..+..  .+.+.  .+..++   ...|.|.....     .. ....+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~--~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHT--EAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEE--EEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceE--EEEcCC---CeEEEEecCccchhhCcccCCCCCCCe
Confidence            457899999 99999        6 9999865432  22343  333322   35677743110     00 01223467


Q ss_pred             eEEEEEeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           94 AQVAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        94 ~Hiaf~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|++|.|+   |+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            89999999   999999999    59999999888877664 68899999999999999986

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.59  E-value=6.7e-14  Score=98.12  Aligned_cols=109  Identities=13%  Similarity=-0.009  Sum_probs=75.4

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      .++++|++ .|+|+        ++|||++..+..    .+  +++...+    ..+.|....... .+...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g----~~~~l~~~~~~~-~~~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFG----DQLVCHLSDRWD-REVSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETT----EEEEEEECSCSC-SSCCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeC----CEEEEEEcCccc-ccCCCCCCeEEEEE
Confidence            57899999 99999        999999966532    23  3444322    124443222111 11223567999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCeeecCCcccC---CCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DD---VYKSAEVVNLVTQELGGKITRQPGSIP---GLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~---~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .+   +++++++|    +++|+++..+|....   .+..+.+||+|||||.|||++..+
T Consensus        76 ~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            64   88999999    699999987776531   122578999999999999999754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.59  E-value=1.5e-14  Score=99.18  Aligned_cols=106  Identities=11%  Similarity=0.009  Sum_probs=75.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |.+.++ |+. .|+|+        ++|||++..+.    +..  +++..++ .....+.|. . ...   ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~~-~~~~~l~l~-~-~~~---~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----GWI--VTHASPL-EAHAQVSFA-R-EGG---SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SSE--EEEEEEE-EEEEEEEEE-S-SSB---TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CEE--EEEecCC-CCcEEEEEE-c-CCC---CCCceeEEEE
Confidence            345667 999 99999        89999997641    222  2333221 013445553 2 111   1234579999


Q ss_pred             EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|+|+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||+++
T Consensus        71 ~v~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARI----LKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHH----HHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHH----HHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            999999999999    59999998888776664 5889999999999999985

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.58  E-value=4.3e-14  Score=101.46  Aligned_cols=114  Identities=18%  Similarity=0.103  Sum_probs=81.4

Q ss_pred             eecCCCCcceeEEE-eeCCc-----------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC---cccc
Q 031367           24 LLFNPKDLPLNDVV-FVGSL-----------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYT   88 (161)
Q Consensus        24 ~~~~~~~~~i~Hv~-~V~Dl-----------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~---~~~~   88 (161)
                      .+..++..+++|++ .|+|+           ++|||++..+...    .. .|+. +    ...|+|......   .++.
T Consensus        12 ~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~----~~-~~~~-g----~~~l~l~~~~~~~~~~~~~   81 (146)
T 3ct8_A           12 HENLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR----GK-SYKH-G----KTYLVFVQTEDRFQTPTFH   81 (146)
T ss_dssp             --CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT----EE-EEEE-T----TEEEEEEECCGGGSCSCCC
T ss_pred             ccccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC----Cc-eEec-C----CeEEEEEEcCCCccccccc
Confidence            34457889999999 99999           7899999876532    11 3554 3    356888543210   1111


Q ss_pred             -cCCCeeEEEEEeC---CHHHHHHHHhHHHHhcCCeeec-CCcccCCC-ceEEEEEECCCCCEEEEEec
Q 031367           89 -KGNAYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGSIPGL-NTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        89 -~g~g~~Hiaf~V~---Di~~~~~~L~~~~~~~Gv~i~~-~p~~~~~~-~~~~~f~~DPDG~~IEl~~~  151 (161)
                       ...+..|++|.|+   |+++++++|    +++|+++.. +|...+++ ..+.+||+|||||.|||+++
T Consensus        82 ~~~~g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           82 RKRTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             TTSSSCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             ccCCCceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence             2246789999999   899999999    599999987 46554433 25789999999999999874

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.58  E-value=1.6e-13  Score=109.45  Aligned_cols=113  Identities=10%  Similarity=0.080  Sum_probs=82.0

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      ..+.+|+||+ .|+|+        ++|||++..+...+. +.....|+..++  ....+.+...      +...+.+|+|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~Hia  218 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSH--KVHDIAFVEY------PEKGKLHHCS  218 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSS--SSCSEEEEEC------SSTTEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCC--CceeEEEecC------CCCCceeEEE
Confidence            3468899999 99999        899999987765433 344556776543  2333444321      1234589999


Q ss_pred             EEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           98 ISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        98 f~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |.|+|+++   ++++|    +++|+++...|...+.+..+.+||+|||||+|||+...
T Consensus       219 f~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          219 FLLESWEQVLRAGDIM----SMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EECSSHHHHHHHHHHH----HHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EECCCHHHHHHHHHHH----HHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            99998764   45666    69999998888754444467899999999999999873

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.57  E-value=6.9e-14  Score=113.92  Aligned_cols=118  Identities=15%  Similarity=0.240  Sum_probs=83.0

Q ss_pred             CCCCcceeEEE-eeCCc--------cccCCEEEEEEeC-C-CCcEEEEEeeccCCCCceEEEEeeeCCCcc-cccCCCee
Q 031367           27 NPKDLPLNDVV-FVGSL--------QALGMKLLRTVDK-P-EYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYA   94 (161)
Q Consensus        27 ~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~-~-~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~~~g~g~~   94 (161)
                      .|++.+|+||+ .|+|+        ++|||++..+... . .+.+.++| +....+....|+|........ ....+++.
T Consensus         3 ~~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~-~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~   81 (335)
T 3oaj_A            3 AKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYF-GNEGGKPGTIITFFPWAGARQGVIGDGQVG   81 (335)
T ss_dssp             CCCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEE-ESTTCCTTSEEEEEECTTCCBCBCCBSEEE
T ss_pred             cccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEE-ecCCCCCCcEEEEEECCCCCCCCCCCCceE
Confidence            35788999999 99999        9999999877432 2 23444433 322212246788854322211 11224678


Q ss_pred             EEEEEeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           95 QVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        95 Hiaf~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+||.|+  |+++++++|    +++|+++..  ..  ....+.+||+|||||.|||++...
T Consensus        82 hiaf~V~~~dl~~~~~rL----~~~Gv~~~~--~~--~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           82 VTSYVVPKGAMAFWEKRL----EKFNVPYTK--IE--RFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EEEEEECTTCHHHHHHHH----HHTTCCCEE--EE--ETTEEEEEEECTTSCEEEEEECSC
T ss_pred             EEEEEecHHHHHHHHHHH----HhCcceeee--ec--cCCcEEEEEECCCCCEEEEEEeCC
Confidence            9999999  999999999    599999874  22  223689999999999999999753

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.57  E-value=7.5e-14  Score=113.22  Aligned_cols=133  Identities=26%  Similarity=0.418  Sum_probs=95.4

Q ss_pred             CceEEEEecCCce---eecC-CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEE
Q 031367           11 SGSIVVVIKSAYS---LLFN-PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE   77 (161)
Q Consensus        11 ~~~~~~~~~~~~~---~~~~-~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~le   77 (161)
                      ++..++..||++.   ++.. +....+.|+. .|+|+        ++|||++..+....  .  .+|+..++  ....++
T Consensus       134 ~~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~--~~~l~~g~--~~~~l~  207 (330)
T 3zi1_A          134 EGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--Q--RALLGYAD--NQCKLE  207 (330)
T ss_dssp             TTEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--T--EEEEESST--TSCEEE
T ss_pred             CceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--c--EEEEEeCC--ceEEEE
Confidence            4556777888885   2222 2456799999 99999        99999998876443  2  25666654  356787


Q ss_pred             EeeeCCCcccccCCCeeEEEEEeC--CHHHHHHHHhHHHHhcCCeeecCCccc--CC-CceEEEEEECCCCCEEEEEecC
Q 031367           78 LTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSI--PG-LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        78 L~~~~~~~~~~~g~g~~Hiaf~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~-~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +...+.  ....+.++.|++|.|+  |+++++++|    +++|+++..+|...  ++ ...+.+||+|||||+|||++..
T Consensus       208 l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl----~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          208 LQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM----KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             EEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH----HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             ECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH----HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            754332  1223456789999996  678999998    69999988776542  21 1258899999999999999986


Q ss_pred             Cch
Q 031367          153 DFL  155 (161)
Q Consensus       153 ~~~  155 (161)
                      .++
T Consensus       282 ~~~  284 (330)
T 3zi1_A          282 AFR  284 (330)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            554

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.57  E-value=1.5e-14  Score=103.79  Aligned_cols=107  Identities=15%  Similarity=0.160  Sum_probs=78.4

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCccc-ccCCCeeEEEEEe
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAIST  100 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~-~~g~g~~Hiaf~V  100 (161)
                      .+++|+. .|+|+        ++|||++..+.  +  .+  +++..++   ...|+|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TF--SLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TE--EEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--Ce--EEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            4899999 99999        89999997664  2  24  3344332   356777432211111 1234678999999


Q ss_pred             C---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          101 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       101 ~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +   |+++++++|    +++|+++..+|...++  ++.+||+|||||.|||+++.
T Consensus        95 ~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            8   478888888    6999999988887665  48899999999999999864

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.57  E-value=1.6e-14  Score=104.20  Aligned_cols=110  Identities=14%  Similarity=0.119  Sum_probs=76.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc------ccccCCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNA   92 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~------~~~~g~g   92 (161)
                      +|..+++|+. .|+|+        ++|||++...   +++.+.  ++..++.    .++|.......      ..+...+
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~--~~~~~~~----~~~l~~~~~~~~~~~l~~~~~~~g   91 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYS--MVTTGPV----GESGMPDEPGYINGGMMQRGEVTT   91 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEE--EEECSCB----CTTSSBCSSSCBCEEEEESSSSCS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEE--EEEeCCc----ceeecccCCcccccceeecCCCCe
Confidence            5667999999 99999        8999999763   223443  3443321    12221110000      0011245


Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      . |++|.|+|+++++++|    +++|+++..+|...++. ++.+||+|||||.|||++..
T Consensus        92 ~-~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 P-VVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             C-EEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             E-EEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            5 9999999999999999    59999999888766621 48999999999999999874

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.56  E-value=1.3e-13  Score=110.98  Aligned_cols=111  Identities=18%  Similarity=0.216  Sum_probs=82.1

Q ss_pred             CCCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           28 PKDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      +...+|+|+. .|+|+       ++|||++........+.....|+..++  ....+.+...       .+.+++|++|.
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY~~LGf~~~~~~~~~~g~~~~~f~~~~~--~~~~~~~~~~-------~~~~~~Hiaf~  218 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFA  218 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHHHhCCCeEEEEEEcCCCcEEEEEEEcCC--CcccEEEeCC-------CCCCceEEEEE
Confidence            4578999999 99999       899999987765555544556766543  2334555321       12378999999


Q ss_pred             eCCHHH---HHHHHhHHHHhcCC--eeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          100 TDDVYK---SAEVVNLVTQELGG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       100 V~Di~~---~~~~L~~~~~~~Gv--~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+|+++   ++++|    +++|+  ++...|.....+..+++||+|||||+|||++.
T Consensus       219 v~d~d~v~~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          219 THEKHNIIQICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            999988   88888    69999  88866654333335789999999999999875

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.56  E-value=1.3e-13  Score=96.04  Aligned_cols=105  Identities=17%  Similarity=0.192  Sum_probs=76.2

Q ss_pred             ceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCH
Q 031367           32 PLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  103 (161)
Q Consensus        32 ~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di  103 (161)
                      ...|+. .|+|+       ..|||++..+    ++.+  +++..+    ...|+|.......   ...+..|++|.|+|+
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYERLGFGIVFR----DAGW--MILQRG----DLMLEFFAHPGLD---PLASWFSCCLRLDDL   69 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHTTTCEEEEE----CSSE--EEEEET----TEEEEEEECTTCC---GGGCCCEEEEEESCH
T ss_pred             ccEEEEEEeCCHHHHHHHHHHCCCEEEec----CCCE--EEEEeC----CEEEEEEeCCCCC---CCCcceEEEEEECCH
Confidence            356888 99999       3399999866    1234  345543    3567775332211   123457999999999


Q ss_pred             HHHHHHHhHHHHhcCCee-------ecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367          104 YKSAEVVNLVTQELGGKI-------TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus       104 ~~~~~~L~~~~~~~Gv~i-------~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      ++++++|    +++|+++       ..+|...+++ .+.+||+|||||.|||++....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchhh
Confidence            9999999    5999994       6677766664 5889999999999999998654

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.56  E-value=2e-14  Score=102.97  Aligned_cols=110  Identities=16%  Similarity=0.132  Sum_probs=76.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCC---cccccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~---~~~~~g~g~~H   95 (161)
                      +++.+|+||. .|+|+        ++|||++....   + .+  .++..++    ..++|......   .......+..|
T Consensus        23 m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g~----~~l~l~~~~~~~~~~~~~~~~g~~~   92 (147)
T 3zw5_A           23 MLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFGD----QKFNLHEVGKEFEPKAAHPVPGSLD   92 (147)
T ss_dssp             TSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEETT----EEEEEEETTSCCSSCCSSCCTTCCE
T ss_pred             eecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEECC----cEEEEEEcCCCcCcccCCCCCCCce
Confidence            5678999999 99999        89999998542   1 23  2344432    35666422111   11112345679


Q ss_pred             EEEEeC-CHHHHHHHHhHHHHhcCCeeecCCcccCCC--ceEEEEEECCCCCEEEEEec
Q 031367           96 VAISTD-DVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        96 iaf~V~-Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~--~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ++|.+. |+++++++|    +++|+++..+|....+.  ..+.+||+|||||+|||++.
T Consensus        93 ~~~~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           93 ICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEEECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            999996 999999999    69999988766543222  23689999999999999874

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.56  E-value=1.4e-13  Score=109.36  Aligned_cols=113  Identities=14%  Similarity=0.208  Sum_probs=78.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ++..+++|+. .|+|+        ++|||++..+.....+.....|+..+..  ...+++...      +...+..|++|
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f  217 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSF  217 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEE
Confidence            4578899999 99999        8999999876543333222235554321  233555321      11223789999


Q ss_pred             EeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+   |+++++++|    +++|+++..+|...+.+.++.+||+|||||+|||++..
T Consensus       218 ~v~d~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          218 HLETWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             ECSCHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecc
Confidence            999   466677888    69999998777664433357899999999999999964

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.56  E-value=4.3e-14  Score=98.12  Aligned_cols=104  Identities=13%  Similarity=0.014  Sum_probs=76.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ||.+.-.|+. .|+|+        ++|||++..+  .  ..+  +++..+    ...|.|.... ..  +.+.+ .|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~--~--~~~--~~~~~~----~~~l~l~~~~-~~--~~~~~-~~~~~   66 (122)
T 1qto_A            1 MVKFLGAVPVLTAVDVPANVSFWVDTLGFEKDFG--D--RDF--AGVRRG----DIRLHISRTE-HQ--IVADN-TSAWI   66 (122)
T ss_dssp             CCCCCCCCCEEEESSHHHHHHHHHHTTCCEEEEE--C--SSE--EEEEET----TEEEEEEECS-CH--HHHTT-CEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHhccCcEEeeC--C--CCE--EEEEEC----CEEEEEEcCC-CC--CCCCc-eEEEE
Confidence            3445566888 99999        9999999865  1  233  345543    3567775322 11  12223 59999


Q ss_pred             EeCCHHHHHHHHhHHHHhc------CC--eeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDDVYKSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~Di~~~~~~L~~~~~~~------Gv--~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|+|+++++++|    +++      |+  ++..+|...+++  +.+||+|||||.|||.++
T Consensus        67 ~v~dvd~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           67 EVTDPDALHEEW----ARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EESCHHHHHHHH----TTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHH----HhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            999999999999    588      99  888888777764  889999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.55  E-value=1.3e-13  Score=109.35  Aligned_cols=111  Identities=11%  Similarity=0.094  Sum_probs=79.1

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCC--------CC-cEEEEEeeccCCCCceEEEEeeeCCCcccccCC
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKP--------EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN   91 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~--------~g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~   91 (161)
                      ..+++|++ .|+|+        ++|||++......+        .+ .....|+..++  ....+++..  .    +...
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~~~~~~--~----~~~~  211 (300)
T 2zyq_A          140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNP--RHHSLAFLP--M----PTSS  211 (300)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSS--BSCSEEEES--S----CCSS
T ss_pred             CCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECC--CccEEEEec--C----CCCC
Confidence            47899999 99999        99999997653322        12 23345665432  233466642  1    1235


Q ss_pred             CeeEEEEEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+||.|+|+++   ++++|    +++|+++..+|...+.+..+.+||+|||||+|||++..
T Consensus       212 g~~h~af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          212 GIVHLMVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SEEEEEEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CceEEEEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            68899999999655   47787    69999998877654444467899999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.55  E-value=3.8e-14  Score=96.52  Aligned_cols=99  Identities=14%  Similarity=0.167  Sum_probs=72.4

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe-
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  100 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V-  100 (161)
                      ++++|+. .|+|+        ++|||++..+..   ..+  +++..++   ...+.|.... ..   ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~---~~~l~l~~~~-~~---~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDND---GFILTLMKGK-EV---QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTT---CCEEEEEECS-SC---CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---CcE--EEEEcCC---CcEEEEEeCC-CC---CCCceeEEEEEcC
Confidence            6799999 99999        899999976531   233  4555432   3567775321 11   123568999999 


Q ss_pred             --CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          101 --DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       101 --~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                        +|+++++++|    +++|+++. +|... +  .+.+||+|||||.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcCC-C--cEEEEEECCCCcEEEEe
Confidence              8899999999    69999976 45433 2  58899999999999997

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.53  E-value=3.7e-14  Score=100.58  Aligned_cols=107  Identities=15%  Similarity=0.163  Sum_probs=75.4

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeee-----CCC-cc-cccCCCeeE
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-----YGV-TE-YTKGNAYAQ   95 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~-----~~~-~~-~~~g~g~~H   95 (161)
                      +++|+. .|+|+        ++|||++..+..  ...+  +++..+    ...|.|...     ... .. ...+.+. |
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~-~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIKF-L   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCCE-E
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCce--EEeecC----CEEEEEcCccccccccccccCCCCCCeE-E
Confidence            899999 99999        899999864321  1223  234432    234554210     011 11 1123454 9


Q ss_pred             EEEEeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           96 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        96 iaf~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++|.|+   |+++++++|    +++|+++..+|...+++ .+.+||+|||||+|||++..
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEcc
Confidence            999999   599999999    59999998888876664 68999999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.51  E-value=1.5e-13  Score=98.43  Aligned_cols=110  Identities=20%  Similarity=0.119  Sum_probs=70.7

Q ss_pred             CCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCC-----C-c-ccccCCCe
Q 031367           29 KDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG-----V-T-EYTKGNAY   93 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~-----~-~-~~~~g~g~   93 (161)
                      +..++.||+ .|+|+       +.||+....+...  ..... +....    ...+.+.....     . . ....+.+.
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~~~~--~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGTLGFEFNPKFTD--ESCAC-MVVSE----QAFVMLIDRARFADFTSKPIADATATTE   78 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHHTTCEECGGGCB--TTEEE-EEEET----TEEEEEEEHHHHGGGCSSCBCCTTTCBS
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHHhCCCcceeecC--CceeE-EeecC----cceEeeeccccccccccccCCCCCCCCe
Confidence            457899999 99999       6677766443222  22322 22221    23333321110     0 0 11122344


Q ss_pred             eEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           94 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        94 ~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .||||.|++   ++++++++    +++|+++..+|.+.++  ++.+||+|||||+|||+..
T Consensus        79 ~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           79 AIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             CEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             eEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEE
Confidence            699999975   66777777    6999999999987654  6889999999999999975

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.49  E-value=2.9e-14  Score=100.69  Aligned_cols=107  Identities=13%  Similarity=0.181  Sum_probs=75.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEE-----eee---CCCcccccCC
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL-----TYN---YGVTEYTKGN   91 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL-----~~~---~~~~~~~~g~   91 (161)
                      ..++++|+. .|+|+        ++|||++..+.  +  .+  +.+..     ...+..     ...   ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF--VLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE--EEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc--EEEec-----cceeccCchhhhhccccCCccccccCC
Confidence            457899999 99999        89999997653  1  22  22321     233331     110   0111112234


Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +..|++|.|+|+++++++|    ++ |+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        74 ~~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC
T ss_pred             CceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecc
Confidence            6689999999999999999    58 99998888877764 58899999999999999974

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.49  E-value=8.7e-13  Score=104.12  Aligned_cols=111  Identities=14%  Similarity=0.088  Sum_probs=77.2

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCC--CC-cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV   96 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~--~g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi   96 (161)
                      ..++++|++ .|+|+        ++|||++..+...+  .| .....|+..++  ....+.+...  .    ...+.+|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~--~----~~~~~~hi  210 (292)
T 1kw3_B          139 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAAF--P----IPKRIHHF  210 (292)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC--S----CSSSEEEE
T ss_pred             CCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECC--CcceEEEecC--C----CCCceEEE
Confidence            347899999 99999        99999997653321  12 22345665432  2234555321  1    13468899


Q ss_pred             EEEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCC-EEEEEecC
Q 031367           97 AISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDNE  152 (161)
Q Consensus        97 af~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~-~IEl~~~~  152 (161)
                      ||.|+|+++   ++++|    + +|+++..+|...+.+..+.+||+||||| +|||++..
T Consensus       211 af~v~d~~~v~~~~~~l----~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          211 MLQANTIDDVGYAFDRL----D-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEBSSHHHHHHHHHHH----H-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHH----h-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            999999765   44555    7 9999988887655544577899999999 99999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.48  E-value=7.3e-13  Score=106.12  Aligned_cols=108  Identities=18%  Similarity=0.206  Sum_probs=79.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ..+.+++|+. .|+|+        ++|||++..+..  + .  .+|+..+.  ....+.|...      +  .+++|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~-~--~~fl~~~~--~~~~l~l~~~------~--~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D-F--MCFLRCNS--AHHRIAILPG------P--PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T-T--EEEEESSS--BSCSEEEEES------S--SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C-e--EEEEecCC--CcceEEEECC------C--CceEEEEE
Confidence            3578999999 99999        999999976541  1 2  24555432  2344666321      1  46899999


Q ss_pred             EeCCHHHH---HHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           99 STDDVYKS---AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        99 ~V~Di~~~---~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      .|+|++++   +++|    +++|+++...|...+.+..+.+||+|||||.|||.+....
T Consensus       202 ~v~d~d~~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  256 (310)
T 3b59_A          202 DMLSVDDMMRGAHRL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEE  256 (310)
T ss_dssp             ECSSHHHHHHHHHHH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCB
T ss_pred             EcCCHHHHHHHHHHH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccE
Confidence            99998766   7888    6999999887765444446789999999999999987543

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.48  E-value=5.6e-13  Score=94.93  Aligned_cols=106  Identities=15%  Similarity=0.108  Sum_probs=72.3

Q ss_pred             eEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc--------ccccCCCeeEE
Q 031367           34 NDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--------EYTKGNAYAQV   96 (161)
Q Consensus        34 ~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~--------~~~~g~g~~Hi   96 (161)
                      -.+. .|+|+        ++|||++..+...+  .+  +++..+    ...++|.......        ..+.+.++ ++
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE--EF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NF   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--TE--EEEEET----TEEEEEEEC-----------CCSSTTTTE-EE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC--CE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCce-EE
Confidence            4577 99999        89999997643322  34  445543    3556665321100        11223466 49


Q ss_pred             EEEeCCHHHHHHHHhHHHHh-cCCeeecCCcccCC------CceEEEEEECCCCCEEEEEecC
Q 031367           97 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGSIPG------LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        97 af~V~Di~~~~~~L~~~~~~-~Gv~i~~~p~~~~~------~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +|.|+|+++++++|    ++ +|+++..+|...++      ...+.+||+|||||+|||++..
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            99999999999999    58 99999877764222      1257899999999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.47  E-value=1.3e-12  Score=103.25  Aligned_cols=113  Identities=14%  Similarity=0.058  Sum_probs=78.1

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCC--CC-cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~--~g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      ..+++|+. .|+|+        ++|||++..+...+  .+ .....|+..+.  ....+.|..  .+    ...+..|++
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~--~~----~~~~~~hia  211 (297)
T 1lgt_A          140 EQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLAIAA--FP----LPKRIHHFM  211 (297)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEEC--CC----CSSSEEEEE
T ss_pred             ccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEEEEc--CC----CCCCceEEE
Confidence            47899999 99999        99999997653221  11 12335665432  234466642  11    235688999


Q ss_pred             EEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           98 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        98 f~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |.|+|++++.+.. +. +++|+++..+|...+++..+.+||+|||||+|||++..
T Consensus       212 f~v~d~~~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          212 LEVASLDDVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEBSCHHHHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EeCCCHHHHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            9999988765222 22 48999999887766554456799999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.47  E-value=1.6e-12  Score=105.17  Aligned_cols=117  Identities=14%  Similarity=0.112  Sum_probs=79.1

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeC-CCCcEEEEEeeccCCCCceEEEEeeeCCCcc-cccCCCeeEEEE
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDK-PEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI   98 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-~~~g~g~~Hiaf   98 (161)
                      ..+++||+ .|+|+        ++|||++..+... .++.....++..+.......|.|........ .....+..|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            78999999 99999        8999999876521 1111222233322111235666643221111 112246789999


Q ss_pred             EeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|+   |+++++++|    +++|+++...+. . ++ .+.+||+|||||.|||++...
T Consensus       108 ~v~~~~dld~~~~~l----~~~G~~~~~~~~-~-~G-~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          108 LVPSEDSLHYWKERF----EKFDVKHSEMTT-Y-AN-RPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EESCHHHHHHHHHHH----HHTTCEECCSEE-E-TT-EEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCHHHHHHHHHHH----HHCCCccccccc-c-CC-cEEEEEECCCCCEEEEEEcCC
Confidence            999   688888998    699999886554 2 33 488999999999999999764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.44  E-value=8e-13  Score=94.54  Aligned_cols=109  Identities=14%  Similarity=0.049  Sum_probs=73.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEE--
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV--   96 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi--   96 (161)
                      .+.++++|+. .|+|+        ++|||++..+..... .+.+  ++       ..|+|. ..............|+  
T Consensus        17 ~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~--~g-------~~l~l~-~~~~~~~~~~~~~~~~~~   85 (148)
T 3bt3_A           17 GYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD--YG-------CVFDYP-SEVAVAHLTPFRGFHLFK   85 (148)
T ss_dssp             SCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE--EE-------EEESSC-TTTTSCC--CCCSEEEEE
T ss_pred             CceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE--Ec-------cEEEEe-ccCCCcccccccccceee
Confidence            4567899999 99999        999999965322222 2322  22       124441 1111101011001232  


Q ss_pred             --------EE-EeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           97 --------AI-STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        97 --------af-~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                              +| .|+|+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||.++.
T Consensus        86 g~~~~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           86 GEPIKGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPWG-ARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SCCCSSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             ccCCCccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeeec
Confidence                    65 999999999999    59999999888877764 68899999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.42  E-value=1.6e-12  Score=103.57  Aligned_cols=108  Identities=17%  Similarity=0.081  Sum_probs=76.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeec-cCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGY-AEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~-~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      .+.+|+||. .|+|+        ++|||++..+..  .+.   +++.. +.. ....+.|...       ...+..|++|
T Consensus         5 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~---~~l~~~~~~-~~~~l~l~~~-------~~~~~~h~a~   71 (309)
T 3hpy_A            5 GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGR---VYFKCWDER-DHSCYIIREA-------DTAGIDFFGF   71 (309)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSC---EEEECTTCC-BSCSEEEEEC-------SSCEEEEEEE
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCe---EEEEeccCC-CceEEEEEeC-------CCCceeEEEE
Confidence            357899999 99999        899999987632  122   23432 221 1244555321       1236789999


Q ss_pred             EeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|+|   +++++++|    +++|+++...|.....+..+.+||+|||||.|||++...
T Consensus        72 ~v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           72 KVLDKATLEKLDADL----QAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             EESCHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             EECCHHHHHHHHHHH----HhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            9997   78888888    699999887654311223678999999999999999754

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.41  E-value=9.2e-12  Score=101.34  Aligned_cols=112  Identities=8%  Similarity=0.009  Sum_probs=74.6

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccC-CCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG-NAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g-~g~~Hiaf   98 (161)
                      .+.+|+||+ .|+|+        ++|||++..+..    ... .|.. ++  ....|+|...........+ .+++|+||
T Consensus       150 ~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~~-~~~~-g~--~~~~l~l~~~~~~~~~~~g~g~~~HiAf  221 (335)
T 3oaj_A          150 AIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFV-RYRS-AG--DIGNVIDLKLTPIGRGQMGAGTVHHIAW  221 (335)
T ss_dssp             SCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TEE-EEEC-SS--SSSCEEEEESSCCCBCBCSBTEEEEEEE
T ss_pred             hhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CEE-EEEe-CC--CCcEEEEEeCCCCCcCCCCCcceEEEEE
Confidence            457899999 99999        899999987642    222 2222 22  2345777543222111122 35899999


Q ss_pred             EeCCH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec-CCch
Q 031367           99 STDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN-EDFL  155 (161)
Q Consensus        99 ~V~Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~-~~~~  155 (161)
                      .|+|.   ++++++|    +++|+++.. +.+..  ..+.+||+||||++|||... +.|.
T Consensus       222 ~v~d~~~l~~~~~~L----~~~G~~~~~-~~~r~--~~~siYfrDP~G~~iEl~td~pgf~  275 (335)
T 3oaj_A          222 RANDDEDQLDWQRYI----ASHGYGVTP-VRDRN--YFNAIYFREHGEILFEIATDPPGFA  275 (335)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCCCC-CEECS--SSEEEEEECTTSCEEEEEESCSCTT
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCccc-cccCC--cEEEEEEECCCCcEEEEEeCCCCCC
Confidence            99994   5566777    699998653 33222  24789999999999999997 3443

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.40  E-value=1.1e-12  Score=104.46  Aligned_cols=111  Identities=12%  Similarity=0.064  Sum_probs=76.2

Q ss_pred             CcceeEEE-eeCCc-------cccCCEEEEEEeCC--CC-cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           30 DLPLNDVV-FVGSL-------QALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~--~g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      ..+++|+. .|+|+       ++|||++..+...+  .+ .....|+..++  ....+.+.. .     +...+++|+||
T Consensus       144 ~~~i~hv~l~v~D~~~s~~FY~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~-~-----~~~~~~~hiaf  215 (305)
T 2wl9_A          144 GQGLGHIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND--RHHSLAFGV-G-----PMDKRINHLMI  215 (305)
T ss_dssp             TTCSCEEEECCSCHHHHHHHHHHHTCEEEECBCEECTTSCEECCEEEESSS--SSCSEEECC-S-----CCSSSEEEEEE
T ss_pred             CceeeeEEEECCCHHHHHHHHHHcCCeeeeeEecccCCCccceEEEEEcCC--CceEEEEec-C-----CCCCCceEEEE
Confidence            46899999 99999       89999986432111  11 12234555432  123344431 1     12256899999


Q ss_pred             EeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+|   +++++++|    +++|+++..+|...+.+..+.+||+|||||+|||++..
T Consensus       216 ~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          216 EYTHLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EcCCHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999   45667777    69999998777655444357889999999999999875

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.40  E-value=3.2e-12  Score=104.24  Aligned_cols=119  Identities=16%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             CCCcceeEEE-eeC--Cc--------cccCCEEEEEEe--CCCCcEEEEEeeccCCCCceEEEEeeeCCC---c---cc-
Q 031367           28 PKDLPLNDVV-FVG--SL--------QALGMKLLRTVD--KPEYKYTLAMLGYAEEDQTTVLELTYNYGV---T---EY-   87 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~leL~~~~~~---~---~~-   87 (161)
                      ...++++|++ .|+  |+        ++|||++.++..  .+.+....+|+..++  +...|+|......   .   .+ 
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHH
Confidence            4578999999 999  99        899999986642  222234556676543  3467888543211   1   01 


Q ss_pred             --ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCccc----C-----CCc-------eEEEEEECCCCCEEEEE
Q 031367           88 --TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI----P-----GLN-------TKITSFVDPDGWKTVLV  149 (161)
Q Consensus        88 --~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~----~-----~~~-------~~~~f~~DPDG~~IEl~  149 (161)
                        ..+.+++||||.|+|+++++++|    +++|+++...|..-    .     .+.       ..++|++||||++|||+
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~  307 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIF  307 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEE
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEE
Confidence              13468999999999999999999    59999988776310    0     000       13799999999999999


Q ss_pred             ecC
Q 031367          150 DNE  152 (161)
Q Consensus       150 ~~~  152 (161)
                      +.+
T Consensus       308 t~~  310 (357)
T 2r5v_A          308 TAS  310 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            953

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.39  E-value=2.2e-12  Score=102.46  Aligned_cols=108  Identities=15%  Similarity=0.150  Sum_probs=76.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      .++++++|+. .|+|+        ++|||++..+..  .+.   +++..+.......+.+  ...     ...+..|++|
T Consensus         3 ~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~~~~~~l~~--~~~-----~~~~~~~~~f   70 (307)
T 1mpy_A            3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEVDKFSLVL--REA-----DEPGMDFMGF   70 (307)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTCCBSCSEEE--EEC-----SSCEEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCCCCceEEEE--ccC-----CCCCcceEEE
Confidence            3568999999 99999        899999987642  122   3454432111222333  111     1236789999


Q ss_pred             Ee---CCHHHHHHHHhHHHHhcCCeeecCCc-ccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 ST---DDVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~-~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|   +|+++++++|    +++|+++...|. ..++ ..+.+||+|||||.|||++..
T Consensus        71 ~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (307)
T 1mpy_A           71 KVVDEDALRQLERDL----MAYGCAVEQLPAGELNS-CGRRVRFQAPSGHHFELYADK  123 (307)
T ss_dssp             EESCHHHHHHHHHHH----HHHTCCCEEECTTSSTT-BCCEEEEECTTSCEEEEESCB
T ss_pred             EeCCHHHHHHHHHHH----HHcCCceecCCcccCCC-ceEEEEEECCCCCEEEEEEcc
Confidence            99   7899999999    599999887664 2333 257899999999999999964

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.39  E-value=2.2e-12  Score=102.61  Aligned_cols=110  Identities=10%  Similarity=0.026  Sum_probs=76.3

Q ss_pred             cceeEEE-eeCCc-------cccCCEEEEEEeCC--CC-cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           31 LPLNDVV-FVGSL-------QALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~--~g-~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      ++++|+. .|+|+       ++|||++..+...+  .+ .....|+..++  ....+.+.  ...    ...+.+|+||.
T Consensus       148 ~~l~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~--~~~----~~~~~~hiaf~  219 (302)
T 2ehz_A          148 QGLGHCIVRQTDVAEAHKFYSLLGFRGDVEYRIPLPNGMTAELSFMHCNA--RDHSIAFG--AMP----AAKRLNHLMLE  219 (302)
T ss_dssp             GCSCEEEECCSCHHHHHHHHHHTTCBCCEEEEEECTTSCEEEEEEEBSSS--BSCSEEEC--SCC----CSSSEEEEEEE
T ss_pred             CccceEEEEcCCHHHHHHHHHhcCCeeeeEEeccCCCCcceEEEEEEeCC--CCcEEEEe--cCC----CCCceeEEEEE
Confidence            4899999 99999       89999986543221  22 23345665432  12334443  111    12468899999


Q ss_pred             eCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |+|+++   ++++|    +++|+++..+|...+.+..+.+||+|||||+|||+...
T Consensus       220 v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          220 YTHMEDLGYTHQQF----VKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             ESSHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             cCCHHHHHHHHHHH----HHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            998764   55677    69999998877655444457899999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.36  E-value=3.6e-11  Score=99.05  Aligned_cols=133  Identities=17%  Similarity=0.162  Sum_probs=89.2

Q ss_pred             CceEEEEecCCceeec------------------CCCCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEE
Q 031367           11 SGSIVVVIKSAYSLLF------------------NPKDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAM   64 (161)
Q Consensus        11 ~~~~~~~~~~~~~~~~------------------~~~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~   64 (161)
                      +..++...|||+.++-                  ...+.++.||. .|+|+       +.|||++........+....+|
T Consensus       113 g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~LGf~~sd~~~~~~g~~~~~f  192 (365)
T 4ghg_A          113 GDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLEDLGFRVTEDIQDDEGTTYAAW  192 (365)
T ss_dssp             CSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTSCEEEEE
T ss_pred             ceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEeecCHHHHHHHHHhcCCEEEEEEecCCCceeEEe
Confidence            4456777888884211                  12467899999 99999       7799999877666666666677


Q ss_pred             eeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCe--eecCCcccCCCceEEEEEECCC
Q 031367           65 LGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPD  142 (161)
Q Consensus        65 l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~--i~~~p~~~~~~~~~~~f~~DPD  142 (161)
                      +....  .+..+.+...       .+.+++|+||.|+|++++.. ....++++|+.  +.+.|+.-.-+...++||+||+
T Consensus       193 ~~~~~--~hH~la~~~~-------~~~~lhHvaf~v~d~d~v~~-~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~  262 (365)
T 4ghg_A          193 MHRKG--TVHDTALTGG-------NGPRLHHVAFSTHEKHNIIQ-ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPD  262 (365)
T ss_dssp             EESSS--SSCSEEEEES-------SBSEEEEEEEECSSHHHHHH-HHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTT
T ss_pred             eecCC--cccceeeecC-------CCCceeEEEEecCCHHHHHH-HHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCC
Confidence            77543  2344545321       23479999999999865322 22233688885  4455553222235789999999


Q ss_pred             CCEEEEEecCC
Q 031367          143 GWKTVLVDNED  153 (161)
Q Consensus       143 G~~IEl~~~~~  153 (161)
                      |++||+.....
T Consensus       263 G~~iE~~t~g~  273 (365)
T 4ghg_A          263 NHRIEIYTQDY  273 (365)
T ss_dssp             CCEEEEEECCC
T ss_pred             CceEEEEcCCc
Confidence            99999988644

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.35  E-value=2.4e-11  Score=96.23  Aligned_cols=110  Identities=15%  Similarity=0.144  Sum_probs=76.1

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      ...+.|+. .|+|+        ++|||++......+.+.+  +++..++   .....+ .... . . ...+..|++|.|
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~--~~~~~~~---~~~~~~-~~~~-~-~-~~~~~~~~~~~v  232 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNY--RVLKAGD---AEVGGC-MEPP-M-P-GVPNHWHVYFAV  232 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------C--EEEEETT---EEEEEE-ECCS-S-T-TCCSEEEEEEEC
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcce--EEEEcCC---ccEeee-cCCC-C-C-CCCCeEEEEEEe
Confidence            46799999 99999        899999875431122233  2333322   222223 2211 1 1 122456999999


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +|++++++++    +++|+++..+|...+++ .+.+||+|||||.|||++..+
T Consensus       233 ~dvd~~~~~~----~~~G~~~~~~p~~~~~~-~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          233 DDADATAAKA----AAAGGQVIAEPADIPSV-GRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             SCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC-
T ss_pred             CCHHHHHHHH----HHcCCEEecCCeEcCCC-eEEEEEECCCCCEEEEEecCC
Confidence            9999999999    59999999888887764 689999999999999999753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.35  E-value=7.6e-12  Score=103.05  Aligned_cols=107  Identities=22%  Similarity=0.157  Sum_probs=75.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +.+++|.||. .|+|+        ++|||++..+..   +.   +|+...+......+.|...       ...++.|++|
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~~---~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~   79 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---NQ---IYLRSFEEFIHHNLVLTKG-------PVAALKAMAF   79 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---SE---EEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---CE---EEEEeCCCCcceEEEeccC-------CCCCcceEEE
Confidence            3568999999 99999        899999987632   11   3454333223344555321       1246889999


Q ss_pred             EeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           99 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        99 ~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .|.+   +++++++|    +++|+++...+.....+.++.++|+|||||.|||+..
T Consensus        80 ~v~s~~dLd~~~~~L----~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           80 RVRTPEDVDKAEAYY----QELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             EeCCHHHHHHHHHHH----HHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence            9986   56666666    6999998875543333335789999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.35  E-value=1.7e-11  Score=99.11  Aligned_cols=110  Identities=14%  Similarity=0.056  Sum_probs=74.0

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc-ccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~-~~~~g~g~~Hiaf   98 (161)
                      .+.+++|++ .|+|+        ++|||++..+..    .+. .|....+......+.+. . ... ......++.|++|
T Consensus       177 ~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~-~~~~~~~g~~~~~~~~~-~-~~~~~~~~~~~~~hiaf  249 (338)
T 1zsw_A          177 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEA-IFQSIKGEAFGEIVVKY-L-DGPTEKPGRGSIHHLAI  249 (338)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEE-EEESSTTCSTTCEEEEE-C-CSSBCBCCBTCEEEEEE
T ss_pred             cCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeE-EEEecCCCCceEEEEec-c-CCCCCCCCCCceEEEEE
Confidence            357899999 99999        899999976642    232 23321111101334442 2 211 1111246789999


Q ss_pred             EeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+   |+++++++|    +++|+++. +|...  ...+.+||+|||||.|||++..
T Consensus       250 ~v~~~~dv~~~~~~l----~~~G~~~~-~~~~~--~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          250 RVKNDAELAYWEEQV----KQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHH----HHCCCcee-eeeec--CceEEEEEECCCCCEEEEEEcC
Confidence            999   688889998    69999985 55543  2367899999999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.33  E-value=1.6e-11  Score=101.48  Aligned_cols=117  Identities=18%  Similarity=0.171  Sum_probs=85.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCcc----------
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------   86 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~~----------   86 (161)
                      +..++++||. .|+|+        ++|||++..+...+.+  ....+++..+    ...++|.....+..          
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHH
Confidence            5568999999 99999        8999999887532212  2344555543    36788865322111          


Q ss_pred             cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccC--CCceEEEEEECCCCCEEEEEecC
Q 031367           87 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        87 ~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~--~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ..++.++.||||.|+|++++++++    +++|+++..+|....  .+..+.++|+||+|+++||+++.
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             HhcCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            123568999999999999999999    599999998776421  22236888999999999999974

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.32  E-value=1.7e-11  Score=99.46  Aligned_cols=105  Identities=18%  Similarity=0.182  Sum_probs=75.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      .+++++||. .|+|+        ++|||++..+..   +  .+++...++ .....+.|...       ...++.|++|.
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~-~~~~~l~l~~~-------~~~g~~~~af~   74 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYED-PYPWSLKITEA-------PEAGMGHAAMR   74 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTC-SSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCC-CCceEEEEeeC-------CCCCcceEEEE
Confidence            467899999 99999        899999987732   1  222223222 12334555321       12468899999


Q ss_pred             eCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |+|   +++++++|    +++|+++...|.. ++ ..+.+||+|||||.|||+...
T Consensus        75 v~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           75 TSSPEALERRAKSL----TDGNVDGTWSEDQ-FG-YGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             ESSHHHHHHHHHHH----HHTTCCEEEECCS-TT-BCCEEEEECTTCCEEEEECCB
T ss_pred             eCCHHHHHHHHHHH----HHCCCceeeccCC-CC-ceEEEEEECCCCCEEEEEEee
Confidence            998   77888888    6999999876652 22 367899999999999999763

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.32  E-value=1.2e-11  Score=99.43  Aligned_cols=108  Identities=20%  Similarity=0.169  Sum_probs=77.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +++.+++|+. .|+|+        ++|||++..+.  .  ..  +|+...+......|.|...       ...+..|++|
T Consensus        13 ~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~--~--~~--~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~f   79 (323)
T 1f1u_A           13 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED--E--NT--IYLRSLEEFIHHNLVLRQG-------PIAAVAAFAY   79 (323)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC--S--SE--EEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec--C--CE--EEEEecCCCCcEEEEEEEC-------CCCCeeEEEE
Confidence            5678999999 99999        89999997653  1  22  3444222111345666421       1235789999


Q ss_pred             Ee---CCHHHHHHHHhHHHHhcCCeeecCCc-ccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 ST---DDVYKSAEVVNLVTQELGGKITRQPG-SIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~-~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|   +|+++++++|    +++|+++...|. ..++ .++.++|+|||||.|||++...
T Consensus        80 ~v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~-~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           80 RVKSPAEVDAAEAYY----KELGCRTERRKEGFTKG-IGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCEEEETTCSSTT-BCSEEEEECTTSCEEEEECCBC
T ss_pred             EeCCHHHHHHHHHHH----HhCCCcEEeccccccCC-cceEEEEECCCCCEEEEEEecc
Confidence            99   6788888888    599999887765 3333 2578999999999999998743

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.31  E-value=1.4e-11  Score=97.21  Aligned_cols=104  Identities=13%  Similarity=0.139  Sum_probs=74.8

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +++++|+. .|+|+        ++|||++..+..   +.   +|+..++  ....+.+.  .+     ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~l~~~~--~~~~l~~~--~~-----~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---DA---ALYRADQ--RAWRIAVQ--PG-----ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TE---EEEESSS--BSCSEEEE--EC-----TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---Ce---EEEEcCC--ceEEEEEc--cC-----CCCCccEEEEEE
Confidence            57899999 99999        999999987642   11   2444432  12234332  11     123578999999


Q ss_pred             C---CHHHHHHHHhHHHHhcCCeeecCCccc---CCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 D---DVYKSAEVVNLVTQELGGKITRQPGSI---PGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~---~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +   |+++++++|    +++|+++...|...   ++ ..+.+||+|||||.|||++...
T Consensus        67 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           67 DDAAALERMADKL----RQAGVAFTRGDEALMQQRK-VMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             SSHHHHHHHHHHH----HHHTCCCEECCHHHHHHHT-CSEEEEEECTTSCEEEEEECCC
T ss_pred             CCHHHHHHHHHHH----HHcCCeEeecCcccccccC-ceEEEEEECCCCCEEEEEECcc
Confidence            9   899999999    59999988776531   22 2578999999999999998753

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.31  E-value=1.8e-11  Score=97.05  Aligned_cols=111  Identities=16%  Similarity=0.044  Sum_probs=76.8

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      ..+.|+. .|+|+        ++|||++...... .+  .+..+  ..++   .....+.......+ .......+++|.
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~-~~~~~~~~~--~~~g---~~~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVP-GGGGVYSMA--TLNG---EAVAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEE--EETT---EEEEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCC-CCccCEEEE--EeCC---eeeEeeccCCCCCC-CCCCCcEEEEEE
Confidence            3799999 99999        9999998765422 22  34432  3222   23344432221111 112234699999


Q ss_pred             eCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |+|+++++++|    +++|+++..+|...++. ++.++|+|||||.|||++...
T Consensus       104 v~d~d~~~~~l----~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          104 VDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             CSCHHHHHTTT----TTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESS
T ss_pred             eCCHHHHHHHH----HHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccc
Confidence            99999999999    59999999888776543 689999999999999999754

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.31  E-value=1.1e-11  Score=97.92  Aligned_cols=105  Identities=17%  Similarity=0.172  Sum_probs=75.7

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +++|+||. .|+|+        ++|||++..+..  +  .  +++..++  ....+.+. . .     ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~--~--~~~~~~~--~~~~l~~~-~-~-----~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N--G--DLFRIDS--RAWRIAVQ-Q-G-----EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEESSS--BSCSEEEE-E-C-----TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C--e--EEEEeCC--CcEEEEEe-c-C-----CCCCccEEEEEe
Confidence            46899999 99999        999999987642  1  1  3444432  12334442 1 1     124678999999


Q ss_pred             C---CHHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 D---DVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +   |+++++++|    +++|+++...|...  ..+..+.+||+|||||.|||++...
T Consensus        67 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           67 ADAAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence            9   899999999    59999988766431  1122588999999999999999754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.31  E-value=3.1e-11  Score=98.38  Aligned_cols=115  Identities=18%  Similarity=0.235  Sum_probs=83.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc------cccCCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNA   92 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~------~~~g~g   92 (161)
                      |.+++++||. .|+|+        ++|||++..+.....+.+  +++..+    ...++|........      ..++.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~--~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRS--IALRQG----QVTLVLTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEE--EEEEET----TEEEEEEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceE--EEEEeC----CEEEEEeCCCCCCCHHHHHHHhcCCe
Confidence            3568999999 99999        899999987754433323  334433    35677764322211      124568


Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +.|+||.|+|++++++++    +++|+++..+|.....+..+.++|+||+|+.++|+++.
T Consensus        75 ~~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAA----VRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEEEEEESCHHHHHHHH----HHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEEEEEECCHHHHHHHH----HHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            899999999999999999    59999998777643333346889999999999999974

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.30  E-value=7.3e-12  Score=99.13  Aligned_cols=104  Identities=13%  Similarity=0.088  Sum_probs=73.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEE-EEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLR-TVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~-~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      |++++|+|+. .|+|+        ++|||++.. +.   .+.   +++..++  ....+.|..  .     ...+..|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~---~~~~~~~--~~~~l~l~~--~-----~~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGA---LYLRMDD--FPARLVVVP--G-----EHDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSC---EEEESSS--SSCSEEEEE--C-----SSCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCe---EEEEeCC--CcEEEEEec--C-----CCCCcceEE
Confidence            4568999999 99999        999999875 32   122   3444432  234455532  1     124678999


Q ss_pred             EEeCC---HHHHHHHHhHHHHhcCCeeecCCccc---CCCceEEEEEECCCCCEEEEEec
Q 031367           98 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSI---PGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        98 f~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~---~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |.|+|   +++++++|    +++|+++...|...   ++ ..+.+||+|||||.|||++.
T Consensus        66 ~~v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           66 WECANAEGLQEIRNRL----DLEGTPYKEATAAELADRR-VDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EECSSHHHHHHHHHHH----HHHTCCCEECCHHHHHHHT-CSEEEEEECTTCCEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHH----HHcCCeEEeCChhhccccc-ceEEEEEECCCCCEEEEEEc
Confidence            99975   77788888    69999988766531   12 25789999999999999997

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.29  E-value=8.5e-12  Score=99.17  Aligned_cols=105  Identities=15%  Similarity=0.135  Sum_probs=75.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      ...+++|+. .|+|+        ++|||++..+  ... ..  +++..++  ....|.|. . .     ...+..|++|.
T Consensus         3 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~--~~~-~~--~~~~~~~--~~~~l~l~-~-~-----~~~~~~~~~f~   68 (305)
T 2wl9_A            3 KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDD--GED-DR--IYLRMDR--WHHRIVLH-A-D-----GSDDLAYIGWR   68 (305)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHTTTTCCEEECC--SCT-TE--EEEECSS--BSCSEEEE-C-S-----SCCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhccCCEEeec--cCC-Ce--EEEEeCC--CeEEEEEE-E-C-----CCCCeEEEEEE
Confidence            468899999 99999        8999999752  112 22  3444432  13456663 2 1     12457899999


Q ss_pred             eC---CHHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEec
Q 031367          100 TD---DVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       100 V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+   |+++++++|    +++|+++..+|...  ..+..+.+||+|||||.|||++.
T Consensus        69 v~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           69 VAGPVELDELAEQL----KNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             ECCHHHHHHHHHHH----HHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            97   688888998    59999988777543  12236789999999999999987

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.29  E-value=2.3e-11  Score=89.46  Aligned_cols=111  Identities=12%  Similarity=0.053  Sum_probs=70.4

Q ss_pred             cceeEEE-eeCC--c--------cccCCEEEEEEe-------CCCCcEEEEEeeccCCCCceEEEEeeeCCC-c-cccc-
Q 031367           31 LPLNDVV-FVGS--L--------QALGMKLLRTVD-------KPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T-EYTK-   89 (161)
Q Consensus        31 ~~i~Hv~-~V~D--l--------~vLG~~~~~~~~-------~~~g~~~~~~l~~~~~~~~~~leL~~~~~~-~-~~~~-   89 (161)
                      +.--++. .|+|  +        ++|||++.....       ...+.+..+.+..+    ...|.|...... . +... 
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~   98 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKS   98 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCT
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccC
Confidence            3446777 9999  7        899999976431       11122222234333    234555321111 0 0111 


Q ss_pred             -CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCccc--CCCceEEEEEECCCCCEEEEEecCC
Q 031367           90 -GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        90 -g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~--~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                       +.++ ||+|.|+|+++++++|    +++|++ ..+|...  +|  .++++|+||+||.|+|++...
T Consensus        99 ~~~g~-~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A           99 EGSGV-TFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             TSCCC-EEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CCCcE-EEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence             3343 9999999999999999    599999 9888877  66  689999999999999999753

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.28  E-value=7.8e-12  Score=99.38  Aligned_cols=107  Identities=12%  Similarity=0.042  Sum_probs=75.4

Q ss_pred             CCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           27 NPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        27 ~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      .|.+.+++|+. .|+|+        ++|||++..+..  .+ .  .|+..+.  ....+.|.  ..     ...+..|++
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~-~--~~~~~~~--~~~~l~l~--~~-----~~~~~~~~~   69 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD-R--FYLRMDY--WHHRIVVH--HN-----GQDDLEYLG   69 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS-E--EEEESSS--BSCSEEEE--SS-----CCSEEEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc-c--eEEEeCC--CceEEEEe--cC-----CCCCeeEEE
Confidence            35678999999 99999        999999975421  11 1  2344322  23345553  11     123578999


Q ss_pred             EEeC---CHHHHHHHHhHHHHhcCCeeecCCcccC--CCceEEEEEECCCCCEEEEEec
Q 031367           98 ISTD---DVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        98 f~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~--~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |.|+   |+++++++|    +++|+++...|...+  .+..+.+||+|||||.|||++.
T Consensus        70 ~~v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           70 WRVAGKPEFEALGQKL----IDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEECCHHHHHHHHHHH----HHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            9996   678888888    699999887765432  1235789999999999999986

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.26  E-value=4.6e-11  Score=95.60  Aligned_cols=108  Identities=19%  Similarity=0.231  Sum_probs=78.1

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +++.+++|+. .|+|+        ++|||++..+.  +  ..  +++..++......|.|...       ...+..|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~--~--~~--~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED--A--NN--AWFKAQGADEHHVVQLRRA-------DENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC--S--SE--EEEECTTSCCSCSEEEEEC-------SSCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeec--C--Ce--EEEEECCCCCCEEEEEEEC-------CCCCeeEEEE
Confidence            4568899999 99999        89999997653  1  22  3444332001355666421       1246789999


Q ss_pred             Ee---CCHHHHHHHHhHHHHhcCCeeecCCcc--cCCCceEEEEEECCCCCEEEEEecCC
Q 031367           99 ST---DDVYKSAEVVNLVTQELGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        99 ~V---~Di~~~~~~L~~~~~~~Gv~i~~~p~~--~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|   +|+++++++|    +++|+++...|..  .+++ .+.++|+|||||.|||++...
T Consensus        71 ~v~~~~dld~~~~~l----~~~G~~~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           71 AADSRSDVDALRASV----EAAGCKVASEPAVLATPGG-GYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             EESSHHHHHHHHHHH----HHHTCCBCCCSEECCSTTC-CEEEEEECTTSCEEEEEECCC
T ss_pred             EeCCHHHHHHHHHHH----HhCCCeEeecCccccccCC-ceEEEEECCCCCEEEEEEccc
Confidence            99   6788888888    5999999887764  3333 678899999999999998754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.26  E-value=3.2e-11  Score=94.71  Aligned_cols=106  Identities=10%  Similarity=0.154  Sum_probs=73.5

Q ss_pred             CCCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           27 NPKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        27 ~~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      .+..++++||+ .|+|+        ++|||++..+..    .+  +++..++    ..|.|... ..    .+.+..|+|
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g~----~~l~l~~~-~~----~~~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLGV----SQIQFRAA-AD----GTKPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEETT----EEEEEEEC-CT----TCCCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeCC----EEEEEEEC-CC----CCCCeeEEE
Confidence            35668999999 99999        999999876632    12  4555542    55667432 11    123578999


Q ss_pred             EEeC--CHHHHHHHHhHHHHhcCCeeecC-Ccc----cCCCceEEEEEECCCCCEEEEEecCC
Q 031367           98 ISTD--DVYKSAEVVNLVTQELGGKITRQ-PGS----IPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        98 f~V~--Di~~~~~~L~~~~~~~Gv~i~~~-p~~----~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |.|+  |+++++++|    +++ +++..+ +..    ..+ ..+.+||+|||||.|||++...
T Consensus        86 f~V~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~-g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           86 INIAANHFQEGKAWL----SGF-GELLTENDEDQAYFPFF-NAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             EEECTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             EEecHHHHHHHHHHH----Hhc-ceEeccCCccccccccC-CeEEEEEECCCCCEEEEEEeCC
Confidence            9996  588888888    478 887652 221    223 3789999999999999999754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.23  E-value=4.4e-10  Score=81.07  Aligned_cols=112  Identities=17%  Similarity=0.104  Sum_probs=73.3

Q ss_pred             cceeEEE-eeC-Cc--------cccCCEEEEEEeCCC------------CcEEEEEeeccCCCCceEEEEeeeCCCc-cc
Q 031367           31 LPLNDVV-FVG-SL--------QALGMKLLRTVDKPE------------YKYTLAMLGYAEEDQTTVLELTYNYGVT-EY   87 (161)
Q Consensus        31 ~~i~Hv~-~V~-Dl--------~vLG~~~~~~~~~~~------------g~~~~~~l~~~~~~~~~~leL~~~~~~~-~~   87 (161)
                      +++. .. .|. |+        ++||+++.....+.+            +.+..+-+..++    ..|.+... ... ..
T Consensus         3 m~~~-p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~----~~l~~~d~-~~~~~~   76 (149)
T 1u6l_A            3 LQIV-PYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS----FALMASDN-HPAYPY   76 (149)
T ss_dssp             CEEE-EEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT----EEEEEEEC-CTTSCC
T ss_pred             ceEE-EEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC----EEEEEEcC-CCccCC
Confidence            4544 56 888 88        899999987643321            222222233322    33434221 111 11


Q ss_pred             ccCCCeeEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCch
Q 031367           88 TKGNAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  155 (161)
Q Consensus        88 ~~g~g~~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~  155 (161)
                      +...+ .+|+|.|+|   +++++++|     ++|.++..+|.+.+|+ .++++|+||+|+.|+|.+.....
T Consensus        77 ~~~~g-~~l~~~v~d~~evd~~~~~l-----~~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~~~~  140 (149)
T 1u6l_A           77 EGIKG-CSISLNVDSKAEAERLFNAL-----AEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQDRE  140 (149)
T ss_dssp             CCCCS-EEEEEECSSHHHHHHHHHHH-----HTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESCC--
T ss_pred             CCCCc-eEEEEEcCCHHHHHHHHHHH-----HCCCEEeecccccCcc-cceEEEECCCCCEEEEEEecccC
Confidence            12234 499999999   77888888     4799999999999885 68899999999999999875443

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.22  E-value=8.5e-11  Score=98.65  Aligned_cols=118  Identities=15%  Similarity=0.098  Sum_probs=87.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCC--CcEEEEEeeccCCCCceEEEEeeeCCCc-----------
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGVT-----------   85 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~--g~~~~~~l~~~~~~~~~~leL~~~~~~~-----------   85 (161)
                      +..++++||. +|+|+        ++|||++..+...+.  ..+..+++..+    ...++|.....+.           
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~   96 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTT   96 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCC
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccc
Confidence            4457899999 99999        999999988764332  23454556543    4677776442211           


Q ss_pred             --------c------cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           86 --------E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        86 --------~------~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                              .      ..++.++.||||.|+|++++++++    +++|+++..+|..... ..+.+++++|+|++++|+++
T Consensus        97 ~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~  171 (424)
T 1sqd_A           97 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSY  171 (424)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEE
T ss_pred             cccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEec
Confidence                    0      123468999999999999999999    6999999988875533 25788899999999999988


Q ss_pred             CCc
Q 031367          152 EDF  154 (161)
Q Consensus       152 ~~~  154 (161)
                      ...
T Consensus       172 ~g~  174 (424)
T 1sqd_A          172 KAE  174 (424)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            644

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.17  E-value=4.8e-10  Score=87.82  Aligned_cols=108  Identities=11%  Similarity=0.050  Sum_probs=73.7

Q ss_pred             ceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC-
Q 031367           32 PLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-  101 (161)
Q Consensus        32 ~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~-  101 (161)
                      ..-++. .|+|+        ++|||++..+...+ +.+  ..+..++......+.+...+  .  ..+....+++|.|+ 
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~v~~  255 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWSAGPRFRLAAVP--G--PGPVEPVRLHLDAAG  255 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSSSSSEEEEEECC--C--SSCCCCCEEEEEEES
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCccccccccccCC--C--cCCCCceEEEEEcCc
Confidence            345677 89999        99999998654332 233  23444321101223331111  1  11222358999999 


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |++++++++    +++|+++..+|...+++ .+.++|+|||||+|||.++
T Consensus       256 dvd~~~~~~----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          256 TADSLHRRA----VDAGARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CHHHHHHHH----HHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             cHHHHHHHH----HHcCCccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            999999999    59999999888887765 5889999999999999985

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.15  E-value=2.1e-09  Score=76.02  Aligned_cols=108  Identities=11%  Similarity=0.031  Sum_probs=71.7

Q ss_pred             ceeEEE-eeC--Cc--------ccc-CCEEEEEEeCCC------CcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCe
Q 031367           32 PLNDVV-FVG--SL--------QAL-GMKLLRTVDKPE------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAY   93 (161)
Q Consensus        32 ~i~Hv~-~V~--Dl--------~vL-G~~~~~~~~~~~------g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~   93 (161)
                      ++. .. .|.  |+        ++| |+++.....+.+      +.+..+-+..++    ..+.+...........+.+ 
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~~~~~-   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFDFTPA-   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCCCCTT-
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCCCCCc-
Confidence            454 55 776  88        899 999976433221      233222333332    2333322210011112233 


Q ss_pred             eEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           94 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        94 ~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ..++|.|+|   +++++++|    + +|.++..+|.+.+|+ .++++|+||+|+.|+|.++
T Consensus        80 ~~l~~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEAL----S-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHH----H-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHH----H-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            489999999   99999999    5 999999999999886 6889999999999999975

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.08  E-value=7e-10  Score=92.91  Aligned_cols=117  Identities=15%  Similarity=0.101  Sum_probs=86.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCC------------
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGV------------   84 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~------------   84 (161)
                      +..++++||. .|+|+        +.|||++..+...+.|  .+..+++..+    ...++|......            
T Consensus        27 ~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~  102 (418)
T 1sp8_A           27 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSF  102 (418)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTC
T ss_pred             ccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccc
Confidence            4458899999 99999        7999999887643322  4566666654    366888644222            


Q ss_pred             -cc------cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           85 -TE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        85 -~~------~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                       ..      ..++.++.||||.|+|++++++++    +++|+++..+|..... ..+..++++|+|..++|+++..
T Consensus       103 ~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l----~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~  173 (418)
T 1sp8_A          103 SAAAARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  173 (418)
T ss_dssp             CHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             cchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHH----HHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCC
Confidence             01      124568999999999999999999    5999999988764322 2567888999999999999863

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.04  E-value=1e-09  Score=91.35  Aligned_cols=117  Identities=18%  Similarity=0.201  Sum_probs=86.5

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCC-c-EEEEEeeccCCCCceEEEEeeeCCCc--c-----ccc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEY-K-YTLAMLGYAEEDQTTVLELTYNYGVT--E-----YTK   89 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g-~-~~~~~l~~~~~~~~~~leL~~~~~~~--~-----~~~   89 (161)
                      +..++++||+ .|+|+        +.|||+.......+.| + ...+++..+    ...++|..+..+.  +     ..+
T Consensus         7 ~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            7 GRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhc
Confidence            4568999999 99999        8999999887554322 2 223445543    4678886532221  1     124


Q ss_pred             CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCC--CceEEEEEECCCCCEEEEEecC
Q 031367           90 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        90 g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~--~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +.+..||||.|+|++++++++    +++|++++.+|...+.  +..+.+-|++|.|..+.|+++.
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra----~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKA----RERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCcEEEEEEEeCCHHHHHHHH----HHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            678999999999999999999    6999999988875433  2246788999999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.03  E-value=1.6e-09  Score=89.44  Aligned_cols=119  Identities=13%  Similarity=0.164  Sum_probs=82.3

Q ss_pred             CCCcceeEEE-eeC--Cc--------cccCCEEEEEEe-----CCCCcEEEEEeeccCCCCceEEEEeeeCC--Ccc---
Q 031367           28 PKDLPLNDVV-FVG--SL--------QALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNYG--VTE---   86 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~-----~~~g~~~~~~l~~~~~~~~~~leL~~~~~--~~~---   86 (161)
                      ....+|+|++ .|+  |+        ++|||++.++..     .+.+.+...++..+.  +...|+|.....  ...   
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSSSCCHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEEEecCCcCCCccHHH
Confidence            4568999999 999  99        899999876532     222345555665432  246677754321  111   


Q ss_pred             -c---ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCC---------Cc-------eEEEEEECCCCCEE
Q 031367           87 -Y---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG---------LN-------TKITSFVDPDGWKT  146 (161)
Q Consensus        87 -~---~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~---------~~-------~~~~f~~DPDG~~I  146 (161)
                       +   ..+.|++||||.|+|+++++++|    +++|+++...|..--.         +.       ..+.+-+||+|+++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~ll  333 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLL  333 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEE
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEE
Confidence             1   23568999999999999999999    6999999877642100         00       12577799999999


Q ss_pred             EEEecC
Q 031367          147 VLVDNE  152 (161)
Q Consensus       147 El~~~~  152 (161)
                      +|++.+
T Consensus       334 qift~~  339 (381)
T 1t47_A          334 QIFTKP  339 (381)
T ss_dssp             EEEBCC
T ss_pred             EEeccC
Confidence            998864

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.95  E-value=2.3e-08  Score=71.59  Aligned_cols=108  Identities=9%  Similarity=0.053  Sum_probs=70.6

Q ss_pred             CCcceeEEE-eeCCc--------ccc-CCEEEEEEeCCC------CcEEEEEeeccCCCCceEEEEeeeCCCcccccCCC
Q 031367           29 KDLPLNDVV-FVGSL--------QAL-GMKLLRTVDKPE------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNA   92 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vL-G~~~~~~~~~~~------g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g   92 (161)
                      +.+++..+- .+.|.        ++| |+++.....+.+      +.+..+-+..++    ..+-+ .... ... ..+ 
T Consensus         2 ~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~-~d~~-~~~-~~~-   73 (139)
T 1tsj_A            2 DIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMA-IDAN-SGT-ELP-   73 (139)
T ss_dssp             CCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEE-EC---------C-
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEE-ECCC-CCC-Cce-
Confidence            345677667 66688        899 999976533321      233323333332    22222 1111 111 112 


Q ss_pred             eeEEEEEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           93 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        93 ~~Hiaf~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                       ..|++.|+|   +++++++|    + +|.+++.+|.+.+|+ .++++|+||+|+.|+|..+
T Consensus        74 -~sl~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 -ISLFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             -CCEEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             -EEEEEECCCHHHHHHHHHHH----h-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeec
Confidence             479999988   67778887    4 799999999999996 7899999999999999985

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.93  E-value=3.2e-09  Score=86.64  Aligned_cols=119  Identities=13%  Similarity=0.073  Sum_probs=78.9

Q ss_pred             CCCcceeEEE-eeC--Cc--------cccCCEEEEEEeCCC--CcEEEEEeeccCCCCceEEEEeee-CCCcc-------
Q 031367           28 PKDLPLNDVV-FVG--SL--------QALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYN-YGVTE-------   86 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~~~--g~~~~~~l~~~~~~~~~~leL~~~-~~~~~-------   86 (161)
                      ....+|+||+ .|+  |+        ++|||+........+  +.....++..+.  +...|+|... .....       
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC--CCEEEEEeeecCCCCChHHHhHH
Confidence            3567899999 999  99        899999987654322  122112222222  2467888643 22111       


Q ss_pred             cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeec-CCc---------ccCCCc-------eEEEEEEC----CCCCE
Q 031367           87 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPG---------SIPGLN-------TKITSFVD----PDGWK  145 (161)
Q Consensus        87 ~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~-~p~---------~~~~~~-------~~~~f~~D----PDG~~  145 (161)
                      ...+.|++||||.|+|+++++++|    +++|+++.. .|.         ..+.+.       ..+.+-+|    |+|++
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~l  307 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLL  307 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeE
Confidence            113567899999999999999999    599999987 551         111111       12477789    89999


Q ss_pred             EEEEecC
Q 031367          146 TVLVDNE  152 (161)
Q Consensus       146 IEl~~~~  152 (161)
                      ++|++.+
T Consensus       308 lqift~~  314 (357)
T 1cjx_A          308 LQIFSET  314 (357)
T ss_dssp             EEEEBCC
T ss_pred             EEEeccC
Confidence            9999864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.83  E-value=2.9e-08  Score=80.95  Aligned_cols=112  Identities=13%  Similarity=0.071  Sum_probs=79.8

Q ss_pred             CCCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc--c--cccCCCeeE
Q 031367           28 PKDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--E--YTKGNAYAQ   95 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~--~--~~~g~g~~H   95 (161)
                      +..++++||. .|+|+       ++|||++..+...  ..+  +++..+    ...+.|...+...  .  ..++.++.|
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy~~LGf~~~~~~~~--~~~--~l~~~g----~~~l~l~~~~~~~~~~~~~~~g~gv~~   79 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIFEIMGFTKVATHRS--KNV--HLYRQG----EINLILNNEPNSIASYFAAEHGPSVCG   79 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHHTTCEEEEEESS--SSE--EEEEET----TEEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHCCCEEEEEeCC--eeE--EEEecC----CEEEEEECCCCchhhhhhhhcCCeEEE
Confidence            5678999999 99999       9999999876432  223  233333    3556554322211  0  134578999


Q ss_pred             EEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           96 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        96 iaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +||+|+|++++++++    +++|+++...|..  .+....+.+++|+|..++|+++..
T Consensus        80 iaf~V~D~~~~~~~l----~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           80 MAFRVKDSQKAYNRA----LELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             EEEEESCHHHHHHHH----HHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             EEEEeCCHHHHHHHH----HHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCC
Confidence            999999999999999    5999998876632  222356779999999999998753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.78  E-value=3.2e-08  Score=82.96  Aligned_cols=95  Identities=15%  Similarity=0.212  Sum_probs=65.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-----CcEEEEEeeccCCCCceEEEEeeeC---CCc----cc
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNY---GVT----EY   87 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----g~~~~~~l~~~~~~~~~~leL~~~~---~~~----~~   87 (161)
                      ...+|+|++ .|+|+        ++|||++.++...++     .++...++..+.  +...|+|....   ...    .+
T Consensus       199 ~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~~~l~l~e~~~~~~~~s~i~~f  276 (424)
T 1sqd_A          199 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQTY  276 (424)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHHH
T ss_pred             CcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC--CcEEEEEecccccCCCcchhhhh
Confidence            457899999 99999        999999988764322     234555665443  35677776442   111    11


Q ss_pred             ---ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           88 ---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        88 ---~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                         ..+.|++||||.|+|+.+++++|.++.+.+|+++...|
T Consensus       277 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          277 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             hhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence               24678999999999999999999521122799999765

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.72  E-value=6.6e-07  Score=66.42  Aligned_cols=104  Identities=13%  Similarity=0.061  Sum_probs=70.1

Q ss_pred             eeCCc--------cccCCEEEEEEeCC--------------CCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeE
Q 031367           38 FVGSL--------QALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ   95 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~--------------~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~H   95 (161)
                      .++|.        ++||+++..+..+.              .+..-.+-+..++    ..|.+....+. .+..+++ ..
T Consensus        32 ~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g----~~lm~~D~~g~-~~~~~~~-~s  105 (172)
T 3l20_A           32 AFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLG----VKVLCSDSFGR-ADKINNG-IS  105 (172)
T ss_dssp             EESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETT----EEEEEEECTTC-CCCCCSS-EE
T ss_pred             EECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECC----EEEEEECCCCC-CCCCCCc-EE
Confidence            56677        99999987765542              1333334444432    34444322121 1222334 36


Q ss_pred             EEEEe--------CCHHHHHHHHhHHHHhcC-CeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           96 VAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        96 iaf~V--------~Di~~~~~~L~~~~~~~G-v~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +++.+        +|+++++++|    ++.| +++..+|.+.+|+ .++++|+||+|+.|+|....
T Consensus       106 l~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~wG-~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          106 LLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFWG-GKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTTS-SEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            77777        5788999998    5888 7999999999986 68899999999999998764

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.70  E-value=3.9e-07  Score=65.11  Aligned_cols=98  Identities=14%  Similarity=0.053  Sum_probs=64.8

Q ss_pred             cccC-CEEEEEEeC------CCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC---HHHHHHHHhH
Q 031367           43 QALG-MKLLRTVDK------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVNL  112 (161)
Q Consensus        43 ~vLG-~~~~~~~~~------~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D---i~~~~~~L~~  112 (161)
                      ++|| .++.....+      ..+..-.+.+..++    ..|.+.-......+..+++ .+|+|.|+|   +++++++|  
T Consensus        30 ~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g----~~lm~~d~~~~~~~~~~~~-~~l~l~~~d~~evd~~~~~l--  102 (138)
T 3oms_A           30 SLFDQSEIVSISRYDENGPGKEGTVIHATFTLNG----QEFMCIDSYVNHNFTFTPA-MSLYVTCETEEEIDTVFHKL--  102 (138)
T ss_dssp             TTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEECSSCCSCCCCTT-SCEEEEESSHHHHHHHHHHH--
T ss_pred             HHcCCceEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEEEcCCCCCCCCCCCC-EEEEEEcCCHHHHHHHHHHH--
Confidence            8999 566543322      23444334444432    3344432111111222334 489999999   89999998  


Q ss_pred             HHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          113 VTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       113 ~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                         ++|.++..+|.+.+|+ .++++|+||+|+.|.|...
T Consensus       103 ---~~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A          103 ---AQDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ---HTTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             ---HcCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence               4688999999999986 6899999999999999764

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.70  E-value=5.9e-08  Score=80.72  Aligned_cols=91  Identities=14%  Similarity=0.196  Sum_probs=66.9

Q ss_pred             CCcceeEEE-eeCC--c--------cccCCEEEEEEe---C--CCCcEEEEEeeccCCCCceEEEEeeeCC--Ccc----
Q 031367           29 KDLPLNDVV-FVGS--L--------QALGMKLLRTVD---K--PEYKYTLAMLGYAEEDQTTVLELTYNYG--VTE----   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~D--l--------~vLG~~~~~~~~---~--~~g~~~~~~l~~~~~~~~~~leL~~~~~--~~~----   86 (161)
                      ...+|+|++ .|+|  +        ++|||+..+..+   .  +....+..++..+.  +...|+|..+..  ..+    
T Consensus       170 ~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~~~~s~I~~  247 (393)
T 3isq_A          170 SLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGKKKSQIQE  247 (393)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECCSBCCHHHH
T ss_pred             CeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCCCCCCHHHH
Confidence            457899999 9998  6        899999988754   1  12345555666443  357888864432  111    


Q ss_pred             ---cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           87 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        87 ---~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                         ...|.|++||||.|+|+.+++++|    +++|+++...|
T Consensus       248 fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          248 YVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             HHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence               123678999999999999999999    69999999866

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.66  E-value=1.3e-07  Score=79.08  Aligned_cols=91  Identities=16%  Similarity=0.211  Sum_probs=65.5

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-----CcEEEEEeeccCCCCceEEEEeeeCC---Cc----cc
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNYG---VT----EY   87 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----g~~~~~~l~~~~~~~~~~leL~~~~~---~~----~~   87 (161)
                      ...+|+||+ .|+|+        ++|||++.++...++     .+....++..+.  +...|+|.....   ..    .+
T Consensus       196 ~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i~l~l~e~~~~~~~~s~i~~f  273 (418)
T 1sp8_A          196 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTF  273 (418)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcEEEEEeecccccCCCcchhhh
Confidence            457899999 99999        999999988764322     124445666443  356777754421   11    11


Q ss_pred             ---ccCCCeeEEEEEeCCHHHHHHHHhHHHHh----cCCeeecCC
Q 031367           88 ---TKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  125 (161)
Q Consensus        88 ---~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~----~Gv~i~~~p  125 (161)
                         ..+.|++||||.|+|+++++++|    ++    +|+++...|
T Consensus       274 l~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          274 LDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             hhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence               24678999999999999999999    47    699999876

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.13  E-value=4.6e-05  Score=59.30  Aligned_cols=104  Identities=15%  Similarity=0.113  Sum_probs=64.3

Q ss_pred             eeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEE---EEEe
Q 031367           33 LNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV---AIST  100 (161)
Q Consensus        33 i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi---af~V  100 (161)
                      ..+.. +|.|+        ++|||+++.+...      .+.++...  ....|.|-..+..... ...|.-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~~------~a~lg~~~--~~~~L~lEEsp~~~~~-~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEESA------FLSLGDQT--GLEKLVLEEAPSMRTR-KVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECSS------EEEEECTT--CCEEEEEEECCTTTCB-CCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccCc------EEEeecCC--CcceEEEEeCCCcccc-cccccceeeeEEEEc
Confidence            34455 78887        9999999877432      35677533  2334545332322211 12345566   6999


Q ss_pred             CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++.+++..-|     +++.++.. +.  .+.+++.+|+.||+||.|||....+
T Consensus        82 p~~~el~~lL-----~~~~~~~~-~~--~gdhgyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           82 ENPLEIEGIL-----SKTDSIHR-LY--KGQNGYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             SSHHHHHHHH-----TTCSCCSE-EE--ECSSSEEEEEECTTCCEEEEECCSC
T ss_pred             CCHHHHHHHH-----hccccccc-cc--ccCCcEEEEEECCCCCeEEEEEcCC
Confidence            9998876666     45555331 11  1223578999999999999998654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.89  E-value=0.00023  Score=56.37  Aligned_cols=107  Identities=10%  Similarity=0.118  Sum_probs=69.4

Q ss_pred             CCCcceeEEE-eeCCccccC-----CEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCc----------c---c-
Q 031367           28 PKDLPLNDVV-FVGSLQALG-----MKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----------E---Y-   87 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl~vLG-----~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~----------~---~-   87 (161)
                      .|.++++|+. .|++++.||     |.+......+..+..-..+..+    ...|||+...+..          .   . 
T Consensus        20 ~M~~~lDHlVi~v~~l~~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~~~~~~~~~~~~~~~~~f~   95 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVENNEKLKKMAKTIEGGVAFA   95 (274)
T ss_dssp             -CCCEEEEEEEECTTGGGCCCGGGSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESCHHHHHHHTTSTGGGTCTT
T ss_pred             CccccCCEEEEEeccHHHcCCccceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecCcccccccccccCccchHH
Confidence            4789999999 999999999     9987766544323332233333    3789998543321          0   1 


Q ss_pred             ------ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecC---CcccCCCc---eEEEEEECCC
Q 031367           88 ------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ---PGSIPGLN---TKITSFVDPD  142 (161)
Q Consensus        88 ------~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~---p~~~~~~~---~~~~f~~DPD  142 (161)
                            ..+.|+.|+|++|+|+++..++|    +++|+.+...   -...+.|.   -+.++..|++
T Consensus        96 ~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~  158 (274)
T 3p8a_A           96 TQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQD  158 (274)
T ss_dssp             THHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEEEEEEEEECCCC--CEEEEEEEEECSS
T ss_pred             HHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcCCCccccccCCCCCEEEEEEEeccCCC
Confidence                  23458999999999999999999    5889865421   11223332   2456677765

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.68  E-value=0.00091  Score=60.77  Aligned_cols=53  Identities=17%  Similarity=0.247  Sum_probs=43.2

Q ss_pred             eEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           94 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        94 ~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .|++|.+.|++++.++|    .+.+.++...|....   ...+|+.||+||.|+|.+...
T Consensus        96 ~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CEEEEEESCHHHHHHHH----HTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             ceEEEEeCCHHHHHHHH----HhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            49999999999999999    588888776665332   358999999999999999753

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=96.24  E-value=0.023  Score=38.20  Aligned_cols=57  Identities=11%  Similarity=0.112  Sum_probs=41.2

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .++.|+++.|+|++++.+-.    +..|.+........+....+.+|+.. +|..|||+++.
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY----~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKF----KRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHH----HHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHH----HHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            46899999999999887777    36899876543222232346677766 67899999864

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=94.83  E-value=0.4  Score=34.67  Aligned_cols=87  Identities=15%  Similarity=0.119  Sum_probs=52.4

Q ss_pred             ccc-CCEEEEEEeCC-------CCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCC---HHHHHHHHh
Q 031367           43 QAL-GMKLLRTVDKP-------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---VYKSAEVVN  111 (161)
Q Consensus        43 ~vL-G~~~~~~~~~~-------~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~D---i~~~~~~L~  111 (161)
                      ++| |.++.....++       +|..-.+-+..++    ..+-+. +..+ ..+...++ .|.+.|+|   +++.+++| 
T Consensus        26 ~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g----~~~m~~-d~~p-~~~~~~~~-sl~v~~~d~~e~d~~~~~L-   97 (163)
T 1u69_A           26 ETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG----IPCLGL-NGGP-AFRHSEAF-SFQVATDDQAETDRLWNAI-   97 (163)
T ss_dssp             HHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT----EEEEEE-ECCT-TCCCCTTE-EEEEEESSHHHHHHHHHHH-
T ss_pred             HHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC----EEEEEE-CCCC-CcCCCCce-EEEEEeCCHHHHHHHHHHH-
Confidence            899 99887543321       2343333344432    233332 2211 12222343 88999988   56777777 


Q ss_pred             HHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          112 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       112 ~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                         .+.|.++.           ++..|+||.|+.|-|..+
T Consensus        98 ---~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           98 ---VDNGGEES-----------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             ---HHTTCEEC-----------STTEEECTTSCEEEEEEH
T ss_pred             ---HhCCCEEE-----------EEEEEECCCCCEEEEEeE
Confidence               35788766           234799999999999986

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=94.73  E-value=0.14  Score=34.61  Aligned_cols=58  Identities=9%  Similarity=0.024  Sum_probs=42.2

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCC-----CEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG-----WKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG-----~~IEl~~~~  152 (161)
                      .++.|+++.|+|++++.+-..   +..|.++..... .+....+.++++.+++     ..|||++..
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQ---ETFGWHELHREE-NPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEE-ETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             ceeeEEEEEeCCHHHHHHHHH---HccCceeeeccc-CCCCCeEEEEEEcCCCCcCcceEEEEeecC
Confidence            468999999999998877775   458998764321 1122246788888886     889999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=94.68  E-value=0.11  Score=35.41  Aligned_cols=60  Identities=18%  Similarity=0.222  Sum_probs=42.8

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCC-----CceEEEEEECCCCCEEEEEecCC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG-----LNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~-----~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .++.|+++.|.|++++.+-..   +..|.++.........     .....++++-++|..|+|++...
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYG---TILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHT---TTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHH---hhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            478999999999998877774   3489987753211000     11346788888999999998754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=94.66  E-value=0.14  Score=33.67  Aligned_cols=58  Identities=12%  Similarity=0.062  Sum_probs=41.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .+.|+++.|.|++++.+-.+   +..|.+....... +......+|+.-++|..|+|.+...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~   60 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYV---TYFGATANDLYEN-KTKGFNSYFLSFEDGARLEIMSRTD   60 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHH---HHHCCEECCCEEE-GGGTEEEEEEECSSSCEEEEEEETT
T ss_pred             EEEEEEEEECCHHHHHHHHH---HhcCCeeeccccc-CCCCccEEEEEcCCCcEEEEEecCC
Confidence            46899999999998877775   4679887654211 1112356778877899999998753

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.19  E-value=0.2  Score=32.89  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=39.2

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+++.|+|++++.+-.+   +..|.++...... +....+.++++. +|..+||++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~~   60 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYK---NILGAQVSEAVPL-PEHGVSVVFVNL-GNTKMELLHPL   60 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HTSCCEECCCEEE-GGGTEEEEEEEC-SSSEEEEEEEC
T ss_pred             eeeeEEEEeCCHHHHHHHHH---HhcCCEEeEeeec-CCCCEEEEEEec-CCEEEEEEecC
Confidence            57899999999999888775   3489987643221 111245666665 67899998864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=94.08  E-value=0.19  Score=34.84  Aligned_cols=59  Identities=14%  Similarity=0.097  Sum_probs=40.0

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccC-------------CCceEEEEEECCCCCEEEEEecCC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP-------------GLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~-------------~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .++.|+++.|+|++++.+-..   +..|.++.......+             ....+.+|++. .+..|||++...
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~---~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYA---EFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHH---HHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHH---HhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            478999999999999888885   458987653211100             12245677665 478999998743

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=93.91  E-value=0.18  Score=33.11  Aligned_cols=55  Identities=22%  Similarity=0.181  Sum_probs=39.0

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .++.|+++.|+|++++.+-..   +..|.++...... +......++++..+ ..|+|++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~-~~l~l~~   58 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYV---NQLGFEVIRENHR-PKRHDYKLDLKCGD-IELEIFG   58 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTSCCEEEEEEEE-TTTTEEEEEEEETT-EEEEEEE
T ss_pred             eeEeEEEEEeCCHHHHHHHHH---HhcCCEEEEEeec-CCCcceEEEEecCC-eEEEEEe
Confidence            368899999999999888775   4589987754222 22224567777654 4999998

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=93.63  E-value=0.26  Score=33.46  Aligned_cols=56  Identities=16%  Similarity=0.270  Sum_probs=40.4

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcc----------cCCCceEEEEEECCCC-CEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS----------IPGLNTKITSFVDPDG-WKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~----------~~~~~~~~~f~~DPDG-~~IEl~~~  151 (161)
                      ++.|+++.|+|++++.+-.+   + .|.++......          .+....+.++++-++| ..|||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~---~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFE---E-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---H-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHH---H-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            68899999999999888875   4 89987642110          0112246788888887 79999874

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.40  E-value=0.2  Score=35.11  Aligned_cols=57  Identities=16%  Similarity=0.128  Sum_probs=40.4

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .++.|+++.|+|++++.+-.+   +..|.+...... .+....+.++++. +|..|||++..
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~---~~LG~~~~~~~~-~~~~~~~~~~~~~-g~~~l~l~~~~   63 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYV---GSLKLKLLGMED-LPSQGVKIAFLEI-GESKIELLEPL   63 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTSCCEEEEEEE-EGGGTEEEEEEEE-TTEEEEEEEES
T ss_pred             CcCCEEEEEECCHHHHHHHHH---HccCCeEeeeec-cCCCCeEEEEEeC-CCeEEEEEeEC
Confidence            468999999999999888885   448998765321 1122246677766 46789999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=93.32  E-value=0.28  Score=31.67  Aligned_cols=53  Identities=17%  Similarity=0.340  Sum_probs=39.0

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++.|+++.|+|++++.+-..   +..|.++....    .  ...+++..++|..|++.+...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~----~--~~~~~~~~~~~~~l~l~~~~~   55 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLE---KYFGLTCSGTR----G--NAFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHCCEEEEEE----T--TTEEEEECTTCCEEEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHH---HhCCCEEeccC----C--CcEEEEEcCCCcEEEEEeCCC
Confidence            47899999999998877764   45898876431    1  135777877888999987643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=92.42  E-value=0.8  Score=30.17  Aligned_cols=56  Identities=16%  Similarity=0.121  Sum_probs=38.8

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC---CCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD---G~~IEl~~~  151 (161)
                      ++.|+++.|.|++++.+-.+   +..|.++..... .+.+....+++.-++   |..|+|.+.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYT---KVLGMKLLRTSE-NPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEE-ETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHH---hccCcEEEEecc-cCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            46899999999998877775   458998764322 122223456777655   789999874

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=91.56  E-value=0.37  Score=31.35  Aligned_cols=56  Identities=14%  Similarity=0.127  Sum_probs=37.7

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .++.|+++.|+|++++.+-.+   +..|.++...... +......++++-+++ .|+|.+.
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYV---EKLGFEVLRENHR-PEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHT---TTTCCEEEEEEEE-GGGTEEEEEEEETTE-EEEEEEC
T ss_pred             cccceEEEEeCCHHHHHHHHH---HhcCCEEEeeccC-CCCcceEEEEecCCe-EEEEEec
Confidence            357899999999998887774   3489987643111 111134455666666 8999975

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=91.40  E-value=1.2  Score=31.53  Aligned_cols=60  Identities=18%  Similarity=0.111  Sum_probs=42.8

Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCC------------------CEEEEEe
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG------------------WKTVLVD  150 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG------------------~~IEl~~  150 (161)
                      ..-.++|+++.|.|++++.+-..   +..|.++...... +.+....+|+..+++                  ..|||..
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  106 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYT---RVLGMTLIQKCDF-PIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTH  106 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEE-TTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEE
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHH---HhcCcEEeecccc-CCCceeEEEecCCCcccccccccchhhhcccCCceEEEEE
Confidence            34578999999999998888775   5789987754322 222245677887774                  7999976


Q ss_pred             cC
Q 031367          151 NE  152 (161)
Q Consensus       151 ~~  152 (161)
                      ..
T Consensus       107 ~~  108 (187)
T 3vw9_A          107 NW  108 (187)
T ss_dssp             ET
T ss_pred             ec
Confidence            53

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=91.03  E-value=1.9  Score=32.99  Aligned_cols=108  Identities=12%  Similarity=0.136  Sum_probs=66.0

Q ss_pred             cceeEEE-eeCC--c-------cccCCEEEEE-Ee----CCCCcEEEEEeeccCCCCceEEEEeeeCCCcc-----c--c
Q 031367           31 LPLNDVV-FVGS--L-------QALGMKLLRT-VD----KPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----Y--T   88 (161)
Q Consensus        31 ~~i~Hv~-~V~D--l-------~vLG~~~~~~-~~----~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~-----~--~   88 (161)
                      .++.|++ .|++  +       ... .++... ..    ...+....+|+..++   +..+||.......+     .  .
T Consensus        79 ~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPd---Gn~iEl~~~~~~~~~~~~~~~~~  154 (252)
T 3pkv_A           79 KPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPS---GNIIELISRQQAAPVLDKPFSAD  154 (252)
T ss_dssp             CCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTT---CCEEEEEEESSSSCCCCSCCCGG
T ss_pred             CCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCC---CCEEEEEEeCCCCccccCCCCHH
Confidence            4689999 8874  4       333 333220 00    012223445555553   57799975433211     1  1


Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ...++.|+.+.|+|++++.+.+    ...|.+.......    ..++++.-| +|..|.+...
T Consensus       155 ~i~glghV~L~v~d~~~~~~fl----~~LG~~~~~~~~~----~~~f~~~G~-~g~~i~v~~~  208 (252)
T 3pkv_A          155 QLLSIGEINITTSDVEQAATRL----KQAELPVKLDQIE----PAGLNFIGD-QDLFLLLGPP  208 (252)
T ss_dssp             GCCEEEEEEEECSCHHHHHHHH----HHTTCCCCGGGCC----TTSCEEEEE-TTEEEEEECS
T ss_pred             HCcEeeeEEEEeCCHHHHHHHH----HHcCCCcccCCCC----hheEEEcCC-CcEEEEEcCC
Confidence            1247999999999999998888    4899987754222    145677788 9988888544

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=90.38  E-value=1  Score=30.41  Aligned_cols=58  Identities=17%  Similarity=0.114  Sum_probs=39.9

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC---CCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD---G~~IEl~~~~  152 (161)
                      .++.|+++.|.|++++.+-..   +..|.++..... .+.+..+.++++-++   +..|+|.+..
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYT---ERLGMKVLRKWD-VPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEE-EGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             ceeEEEEEEeCCHHHHHHHHH---hcCCCEEEEeee-cCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            368899999999998877774   458998764321 111123456777665   5899998864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=89.65  E-value=0.55  Score=31.44  Aligned_cols=55  Identities=15%  Similarity=0.099  Sum_probs=36.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+++.|+|++++.+-.+   +..|.++...... +.+....++++  +|..|+|.+..
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~---~~lG~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~   59 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYT---EILDWKELVRGRG-DTTSFAHGVLP--GGLSIVLREHD   59 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEEC-SSEEEEEEECT--TSCEEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhcCCEEEeeccC-CCCceEEEEEc--CCCEEEEEeCC
Confidence            57899999999998877775   3479987643221 11111234444  78999999874

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=88.58  E-value=1.4  Score=28.73  Aligned_cols=57  Identities=18%  Similarity=0.101  Sum_probs=39.4

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC-CCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD-GWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD-G~~IEl~~~~  152 (161)
                      .++.|+++.|.|++++.+-..   +..|.++.......+  ...++.+..++ +..|++.+..
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYV---NTLGFEKVFDNQLDP--NMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEEET--TEEEEEEECTTCSCEEEEECGG
T ss_pred             cceeEEEEEECCHHHHHHHHH---hCcCCcEeeecccCC--CceEEEEECCCCceEEEEecCc
Confidence            478999999999998877775   468998775422111  13556666665 4578888754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=87.50  E-value=2.1  Score=28.98  Aligned_cols=53  Identities=15%  Similarity=0.130  Sum_probs=37.0

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEE-CCCCCEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~-DPDG~~IEl~~~  151 (161)
                      .++.|+++.|.|++++.+-..   +..|.++.....   .  ...+|++ +.++..|+|.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~~---~--~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYT---EILGFEAGLLDS---A--RRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHH---HTSCCEEEEEET---T--TTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHH---HhcCCEEEEecC---C--CcEEEEEecCCCcEEEEecc
Confidence            478999999999998877775   458998765421   1  1234443 445788998875

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=87.21  E-value=2.1  Score=30.17  Aligned_cols=59  Identities=17%  Similarity=0.115  Sum_probs=39.7

Q ss_pred             CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC------------------CCEEEEEec
Q 031367           90 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD------------------GWKTVLVDN  151 (161)
Q Consensus        90 g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD------------------G~~IEl~~~  151 (161)
                      ..++.|+++.|.|++++.+-.+   +..|.++...... +......+++..++                  |..|||++.
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYT---RVLGLTLLQKLDF-PAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEE-GGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             ceeEEEEEEEeCCHHHHHHHHH---HhcCCEEEEeccC-CCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            3478999999999998877774   4589987643211 11112355666653                  689999875


Q ss_pred             C
Q 031367          152 E  152 (161)
Q Consensus       152 ~  152 (161)
                      .
T Consensus       105 ~  105 (184)
T 2za0_A          105 W  105 (184)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=87.09  E-value=2.5  Score=28.23  Aligned_cols=57  Identities=5%  Similarity=0.063  Sum_probs=35.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+++.|+|++++.+-..   +..|.++...........+...++.- +|..|+|.+..
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~~   60 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILE---GVFDAREVYASDTEQFSLSREKFFLI-GDIWVAIMQGE   60 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEEEEEGGGSTTCCSCEEEEEE-TTEEEEEEECC
T ss_pred             eEEEEEEEeCCHHHHHHHHH---HhhCCEEeecCCCccccccceEEEEE-CCEEEEEEeCC
Confidence            57899999999998877764   45899876532211110011123332 56788888753

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=84.96  E-value=4  Score=26.68  Aligned_cols=57  Identities=11%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+++.|+|++++.+-..   +..|.+................+++- +|..|+|.+..
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   60 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQ---NIFNAEEIYSSGDKTFSLSKEKFFLI-AGLWICIMEGD   60 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEECC-----CCCSSCEEEEEE-TTEEEEEEECS
T ss_pred             eEEEEEEEcCCHHHHHHHHH---HhcCCEEeeecCCcccccCCceEEEe-CCEEEEEecCC
Confidence            57899999999998877774   34899876432111000001123332 46778887653

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=83.93  E-value=3  Score=27.78  Aligned_cols=51  Identities=22%  Similarity=0.197  Sum_probs=36.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ++.|+++.|+|++++.+-.+    +.|.++.....   .  ..++.+.-++|..|+|.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~----~LG~~~~~~~~---~--~~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYR----KLGVEIPAEAD---S--APHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHH----TTTCCCCGGGG---G--CSEEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHH----HcCCcEEecCC---C--CceEEEEcCCCeEEEEecC
Confidence            57899999999998877774    48887654321   1  1245555578889999874

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=83.45  E-value=4  Score=27.72  Aligned_cols=55  Identities=18%  Similarity=0.072  Sum_probs=37.4

Q ss_pred             CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           90 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        90 g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ..++.|+++.|.|++++.+-..+.....|.++....   +.  . ..|+.  +|..|+|.+..
T Consensus        18 ~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~---~~--~-~~~~~--g~~~l~l~~~~   72 (146)
T 3ct8_A           18 QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSW---SR--G-KSYKH--GKTYLVFVQTE   72 (146)
T ss_dssp             TTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEE---TT--E-EEEEE--TTEEEEEEECC
T ss_pred             ccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEec---CC--C-ceEec--CCeEEEEEEcC
Confidence            357899999999998877766111267899876432   11  1 24556  67889998864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=83.24  E-value=3  Score=28.31  Aligned_cols=50  Identities=14%  Similarity=0.117  Sum_probs=35.8

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+.+.|+|++++.+-..   +..|.++....       ...++++. +|..|+|.+..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~---~~LG~~~~~~~-------~~~~~~~~-~~~~l~l~~~~   54 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYG---EGFGWAPVFRN-------PEIIFYQM-NGFVLATWLVQ   54 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HTSCCCCSEEC-------SSEEEEEC-SSSEEEEEEHH
T ss_pred             ceEEEEEEcCCHHHHHHHHH---HhcCCEeecCC-------CCEEEEEc-CCEEEEEEecc
Confidence            57899999999998877764   34888765321       12455655 68899998763

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=83.00  E-value=3  Score=27.56  Aligned_cols=52  Identities=8%  Similarity=0.004  Sum_probs=36.5

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .++.|+++.|.|++++.+-..   +..|.++....   +    .++.+...+|..++|.+..
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~---~~lG~~~~~~~---~----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYR---FIFKKEPVFVT---P----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHH---HHHTCCCSEEC---S----SEEEEECSTTCEEEEESSS
T ss_pred             ceeeEEEEEECCHHHHHHHHH---HHcCCeEEEcC---C----CEEEEEcCCCcEEEEEeCC
Confidence            468899999999998777664   34788754321   1    2455666778889888764

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=82.51  E-value=3.5  Score=28.23  Aligned_cols=51  Identities=20%  Similarity=0.135  Sum_probs=36.6

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+.+.|.|++++.+-..   +-.|.++....       ..+++++-++|..++|....
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~---~vLG~~~~~~~-------~~~~~~~~~~g~~l~l~~~~   56 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYK---NLLDTQPIESS-------PTFAMFVMKTGLRLGLWAQE   56 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHH---HHHTCCCSEEC-------SSEEEEECTTSCEEEEEEGG
T ss_pred             cccEEEEEeCCHHHHHHHHH---HHcCCEEeccC-------CCEEEEEcCCCcEEEEecCC
Confidence            57899999999998777765   34788765321       12566776788999997754

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=81.69  E-value=5.9  Score=31.96  Aligned_cols=60  Identities=20%  Similarity=0.241  Sum_probs=41.6

Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCc---------eEEEEEECCCCC---------EEEEEe
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN---------TKITSFVDPDGW---------KTVLVD  150 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~---------~~~~f~~DPDG~---------~IEl~~  150 (161)
                      .|..++|+..+|.|++++.++|    +++|+++....+-.|.+-         ...+-|+|.||.         -.||.+
T Consensus       232 ~G~~iNHlT~rv~DId~v~~~m----~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~~v~~~ip~~F~Efaq  307 (340)
T 3iuz_A          232 EGNAFNHATDRVDDVFGLSEQQ----XALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGETVERDVPGSFYEFIT  307 (340)
T ss_dssp             HTTSCSEEEEECSCHHHHHHHH----HHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSCEEEEEEECCEEEEEE
T ss_pred             cCCccccccCCcCCHHHHHHHH----HHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCceeeeeeeeEEEEeee
Confidence            4668899999999999999999    699998765432222211         234567888863         346666


Q ss_pred             cC
Q 031367          151 NE  152 (161)
Q Consensus       151 ~~  152 (161)
                      +.
T Consensus       308 R~  309 (340)
T 3iuz_A          308 RD  309 (340)
T ss_dssp             EC
T ss_pred             cc
Confidence            54

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=81.62  E-value=3.3  Score=28.13  Aligned_cols=51  Identities=20%  Similarity=0.173  Sum_probs=36.4

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      ++.|+.+.|+|++++.+-..   +..|.++....   +    .+++++-.+|..|+|.+..
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~---~~LG~~~~~~~---~----~~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYK---ALLGVDPVESS---P----TFSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHTCCCSEEE---T----TEEEEECTTSCEEEEEETT
T ss_pred             ceeEEEEEeCCHHHHHHHHH---HccCCEeccCC---C----CeEEEEcCCCcEEEEEeCC
Confidence            67899999999998877764   34788765321   1    1455666668889998754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=80.25  E-value=3.8  Score=27.18  Aligned_cols=52  Identities=12%  Similarity=0.027  Sum_probs=34.4

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .+.|+++.|+|++++.+--.   + .|.++......    .+.++++.-.+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~---~-LG~~~~~~~~~----~~~~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYR---I-IGFQFTASKVD----KGSEVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---H-HTCCCEEC---------CCEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHH---H-CCCEEecccCC----CCCEEEEEeCCCeEEEEEEC
Confidence            57899999999998776664   4 89887654211    11345555346778888654

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=80.14  E-value=3.6  Score=28.39  Aligned_cols=51  Identities=16%  Similarity=0.159  Sum_probs=35.1

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .++.|+++.|+|++++.+-..   +-.|.++.....      ...+|++. ++..+++.+.
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~---~vLG~~~~~~~~------~~~~~~~~-g~~~~~l~~~   57 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYR---DVFGLEMVLKLP------GQLVFFKC-GRQMLLLFDP   57 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHH---HHSCCEEEEEET------TTEEEEEE-TTEEEEEECH
T ss_pred             ccccEEEEEeCCHHHHHHHHH---HhcCCEEEEecC------CcEEEEeC-CCEEEEEEec
Confidence            478999999999998877775   348998775321      12445554 4567777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	161
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-09
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	7e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-05

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 51.2 bits (121), Expect = 1e-09
 Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 4/116 (3%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+
Sbjct: 22  KVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN 81

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI 158
             ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D  + +
Sbjct: 82  AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 41.2 bits (95), Expect = 7e-06
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT Y    AY  +AI  +D
Sbjct: 23  ERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVED 82

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE 157
           V +    +    ++    I  +       +  +   VDPDG+   L++ +  +++
Sbjct: 83  VKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMMEK 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 39.5 bits (91), Expect = 3e-05
 Identities = 10/110 (9%), Positives = 32/110 (29%), Gaps = 6/110 (5%)

Query: 43  QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD 102
           + L +K +    +      +       +      +             +       +  +
Sbjct: 29  EGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVE 88

Query: 103 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 152
           +      +    + +G +        P  +    +  DPDGW+ V ++++
Sbjct: 89  LAAITSKL----KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFMNSK 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.8
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.76
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.74
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.74
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.72
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.72
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.72
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.71
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.66
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.63
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.62
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.62
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.62
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.61
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.6
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.6
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.6
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.57
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.56
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.56
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.56
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.55
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.54
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.54
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.52
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.36
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.34
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.26
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.19
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.13
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.12
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.87
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.82
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.67
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.55
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.51
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.41
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	97.98
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	96.81
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.47
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	95.38
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.69
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	94.65
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	94.14
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	92.37
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	92.1
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	90.58
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	89.92
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	83.78
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	83.78
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	82.99
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	82.85
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	82.8
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.1

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2.3e-18  Score=118.63  Aligned_cols=123  Identities=43%  Similarity=0.774  Sum_probs=86.8

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      |++.||+ +|+|+        ++|||++..+.+...+.+..+.+...........+............+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            6899999 99999        89999998887766666655554433211112222212222222233457789999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchhh
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  157 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~~  157 (161)
                      ++++..+++    +++|+.+..+|...+++..+++||+|||||+|||+|.+.-.++
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~  132 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcccc
Confidence            999999999    5999999988887777667899999999999999998765554

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.76  E-value=5.6e-18  Score=119.56  Aligned_cols=117  Identities=15%  Similarity=0.235  Sum_probs=86.2

Q ss_pred             CCCcceeEEE-eeCCc-------cccCCEEEEEEeCC-----------CCcEEEEEeeccCCCCceEEEEeeeC---CCc
Q 031367           28 PKDLPLNDVV-FVGSL-------QALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNY---GVT   85 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~-----------~g~~~~~~l~~~~~~~~~~leL~~~~---~~~   85 (161)
                      ...++++||+ .|+|+       ..|||++.++....           .....++++....  +...++|+...   +..
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~~~~~~~~~~   82 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIA   82 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCC
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc--cceEEEEEeeccccCcc
Confidence            3468999999 99999       44999998876432           2345566776544  34556664321   111


Q ss_pred             c-c---ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           86 E-Y---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        86 ~-~---~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      . .   ....|+.|++|.|+|+++++++|    +++|+++..+|...++ ..+.+|++||||+.|||+|.
T Consensus        83 ~~~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          83 DHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence            1 1   12347899999999999999999    5999999988876655 36789999999999999986

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.74  E-value=1.7e-17  Score=116.21  Aligned_cols=121  Identities=13%  Similarity=0.114  Sum_probs=85.6

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeecc--CCCCceEEEEeeeCCCcc--------cc
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYA--EEDQTTVLELTYNYGVTE--------YT   88 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~--~~~~~~~leL~~~~~~~~--------~~   88 (161)
                      .|.++|+||+ .|+|+        ++|||+..++......+....+....  .......++|........        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            5789999999 99999        99999998887765544444433321  112356788864433221        11


Q ss_pred             cCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEE--ECCCCCEEEEEecC
Q 031367           89 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  152 (161)
Q Consensus        89 ~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~--~DPDG~~IEl~~~~  152 (161)
                      ...|+.||||.|+|+++++++|    +++|+++..++.....+..+.+|+  +||||+.|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            2457999999999999999999    699999876543222222455666  89999999999974

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.74  E-value=5.5e-18  Score=116.16  Aligned_cols=105  Identities=21%  Similarity=0.167  Sum_probs=81.1

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      |+|+|+. .|+|+        ++||+++.+..+    +|  +++..+    ...|.|......+....+.+ .|++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g----~~~l~l~~~~~~~~~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET----TEEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc----CceeeeeecccCCCCCCCcc-eEEEEEEC
Confidence            6799999 99999        999999877643    24  345554    35566643322222223334 48999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+++++++|    +++|+++..+|...+++ .+.+||+|||||.|||.+.
T Consensus        70 D~d~~~~~l----~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRL----NELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            999999999    69999999999988875 6899999999999999986

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.7e-17  Score=117.07  Aligned_cols=122  Identities=28%  Similarity=0.533  Sum_probs=88.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCC---------------CceEEEEeeeCC
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYG   83 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~---------------~~~~leL~~~~~   83 (161)
                      ....+++||+ +|+|+        ++|||++..+.....+++.++++..+...               ......+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            3457899999 99999        89999999888877777777777654310               111122211111


Q ss_pred             C-----ccc----ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           84 V-----TEY----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        84 ~-----~~~----~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      .     ...    ....++.|++|.++|+++++++|    +++|+++..+|...+  ..+++||+|||||.|||+|+...
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTTG
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCCC
Confidence            1     011    12248899999999999999999    599999999887533  24578999999999999998764


Q ss_pred             h
Q 031367          155 L  155 (161)
Q Consensus       155 ~  155 (161)
                      .
T Consensus       173 ~  173 (176)
T d1qipa_         173 A  173 (176)
T ss_dssp             G
T ss_pred             C
Confidence            3

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.72  E-value=7.2e-17  Score=116.81  Aligned_cols=113  Identities=13%  Similarity=0.173  Sum_probs=82.8

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |..++++||+ +|+|+        ++|||++..+.....+.....++.....  .....+. ..     +..++.+|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~-----~~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFI-HH-----PEKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEE-EC-----SSSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc--ccccccc-cc-----CCCCccceeEE
Confidence            4568999999 99999        9999999888776666555555554331  1112221 11     12346899999


Q ss_pred             EeCCHH---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STDDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~Di~---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .+.+++   +++++|    +++|+++..+|.....+..+.+||+|||||.|||++..
T Consensus        73 ~~~~~~~~~~~~~~L----~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          73 HLETWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             ECSCHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             EEeeehhhhhHHHHH----HHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            999875   555666    69999998888766555568999999999999999863

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=2e-17  Score=116.29  Aligned_cols=115  Identities=16%  Similarity=0.253  Sum_probs=82.8

Q ss_pred             cceeEEE-ee----CCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEE
Q 031367           31 LPLNDVV-FV----GSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA   97 (161)
Q Consensus        31 ~~i~Hv~-~V----~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hia   97 (161)
                      .++.|+. +|    +|+        ++|||++..+..... .+.++++..+.  ....+++....+......+.+.+|++
T Consensus         4 ~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hla   80 (137)
T d1twua_           4 SSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLV   80 (137)
T ss_dssp             SSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEE
T ss_pred             CCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEE
Confidence            3466776 65    698        999999988765443 46777887654  35667776555443333445678999


Q ss_pred             EEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCc
Q 031367           98 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  154 (161)
Q Consensus        98 f~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~  154 (161)
                      |.|+|   +++++++|    +++|+++..++.. .+ ..+.+||+|||||+|||+++...
T Consensus        81 f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          81 FYVPNAVELAAITSKL----KHMGYQEVESENP-YW-SNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             EECCCHHHHHHHHHHH----HHTTCCEECCSSH-HH-HSSEEEEECTTCCEEEEESSCCC
T ss_pred             EEeCCHHHHHHHHHHH----HHCCCeEeCCCCC-CC-CceEEEEECCCCCEEEEEcCCCC
Confidence            99987   66777777    6999999876543 22 25789999999999999987643

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=5e-16  Score=109.39  Aligned_cols=118  Identities=14%  Similarity=0.117  Sum_probs=79.1

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCccccc-CCCeeEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK-GNAYAQVA   97 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~-g~g~~Hia   97 (161)
                      .+.+|+||+ .|+|+        ++|||++..+....+ ......+++.........+.+........... .++++|+|
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            467899999 99999        999999988765433 23333344433322344555533222222122 24689999


Q ss_pred             EEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           98 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        98 f~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      |.|+|   ++++.++|    +++|+.+. +|... + ..+.+||+|||||.|||++...
T Consensus        83 f~v~~~~~l~~~~~~l----~~~gv~~~-~~~~~-~-~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          83 LLVPSEDSLHYWKERF----EKFDVKHS-EMTTY-A-NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEESCHHHHHHHHHHH----HHTTCEEC-CSEEE-T-TEEEEEEECTTCCEEEEEECTT
T ss_pred             EecCCchhHHHHhhhh----hccceeee-Ccccc-C-CeEEEEEECCCCCEEEEEEeCC
Confidence            99998   55566677    69999875 34433 2 3688999999999999998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.66  E-value=3.3e-16  Score=108.41  Aligned_cols=111  Identities=16%  Similarity=0.149  Sum_probs=76.5

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-CcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      |+.+|+|++ .|+|+        ++|||++.++.+... ......++..+    ...+++.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeee
Confidence            567899999 99999        999999988755432 11223444433    34555543211    12235679999


Q ss_pred             EeC--CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~--Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .|+  |+++++++|    +++|+++..++....+ ..+.+||+|||||+|||.+..
T Consensus        73 ~v~~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC
Confidence            775  699999999    6999998866544333 367899999999999998764

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.63  E-value=3.8e-15  Score=108.67  Aligned_cols=110  Identities=16%  Similarity=0.082  Sum_probs=72.2

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      -+.+|+||+ .|+|+        ++|||++..+..    .+..+++..+.  ....+.+.........+..++++||||.
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~HiAf~   82 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGE--AFGEIVVKYLDGPTEKPGRGSIHHLAIR   82 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTC--STTCEEEEECCSSBCBCCBTCEEEEEEE
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCc--cceEEEeccccccccccCccccceEEEE
Confidence            457899999 99999        999999987642    23333333222  1222333222222222223478999999


Q ss_pred             eCCH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          100 TDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       100 V~Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      |+|.   ++++++|    ++.|+++. ++..  ++..+.+||+|||||.|||+..
T Consensus        83 V~~~~~l~~~~~~l----~~~G~~~~-~~~~--~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          83 VKNDAELAYWEEQV----KQRGFHSS-GIID--RFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             ESSHHHHHHHHHHH----HHTTCCCC-CCEE--CSSEEEEEEECTTCCEEEEEEE
T ss_pred             eCChHHHHHHHHHH----HhcCCCcc-cccc--CCCEEEEEEECCCCcEEEEEEC
Confidence            9874   4555555    79999975 4443  3336789999999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.62  E-value=1.3e-15  Score=102.65  Aligned_cols=100  Identities=12%  Similarity=0.125  Sum_probs=70.0

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      |+|+||. .|+|+        ++|||++..+...   .+  +++..+   +...+.+..... .   ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~--~~~~~~---~~~~~~~~~~~~-~---~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AF--AVMRDN---DGFILTLMKGKE-V---QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TE--EEEECT---TCCEEEEEECSS-C---CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---cc--eeeeec---ceeeeeeeeeec-c---cccccceeeeeec
Confidence            6899999 99999        8999999877532   23  334433   245566643221 1   2235679999999


Q ss_pred             CH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          102 DV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       102 Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      |.   ++++++|    +++|+++...|..    ..+.+||+|||||+|||..
T Consensus        70 ~~~~v~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          70 SEEQVDKINQRL----KEDGFLVEPPKHA----HAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCCCCEEC-----CEEEEEEETTTEEEEEEC
T ss_pred             cccchhhhhhhH----HHcCCccccCCCC----ceEEEEEECCCCCEEEEEC
Confidence            84   5566666    6999997755432    2578999999999999963

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.62  E-value=2.8e-15  Score=105.09  Aligned_cols=107  Identities=21%  Similarity=0.217  Sum_probs=73.9

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |+.+|+||+ .|+|+        ++|||++..+...    +  .++..++  ....+.+... .........+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~--~~~~~~~--~~~~l~~~~~-~~~~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----G--AYLTCGD--LWVCLSYDEA-RQYVPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----E--EEEEETT--EEEEEEECTT-CCCCCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----c--ccccccc--ccceeecccc-cccCCCcCCccceeeee
Confidence            678899999 99999        9999999877532    2  2334332  1333333211 11111223456789998


Q ss_pred             e--CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          100 T--DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       100 V--~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      +  +|+++++++|    +++|+++...|.   + .++.+||+|||||.|||.+..
T Consensus        72 ~~~~d~~~~~~~l----~~~Gv~~~~~~~---~-~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRL----EQAGVTIWKQNK---S-EGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHH----HHTTCCEEECCC---S-SSEEEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHH----HHCCCeEeecCC---C-CceEEEEECCCCCEEEEEECC
Confidence            8  5788888888    699999886653   2 367899999999999998753

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.62  E-value=5.1e-15  Score=101.58  Aligned_cols=114  Identities=40%  Similarity=0.619  Sum_probs=78.3

Q ss_pred             cceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeC
Q 031367           31 LPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  101 (161)
Q Consensus        31 ~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~  101 (161)
                      .++.||+ .|+|+        ++|||++..+.......+...+..............................|+++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            5799999 99999        99999999887765544444444432211111111111111112223456789999999


Q ss_pred             CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          102 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       102 Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ++.++++++    ++.++++..++.     ..+++||+|||||+|||++...
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~  124 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKT  124 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCC
Confidence            999999999    588888776542     2578999999999999999754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.61  E-value=9.8e-15  Score=107.05  Aligned_cols=112  Identities=17%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             CCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           29 KDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      .+++|+||+ .|+|+       ++|||++..+.....+....+|+....  ....+.+...       ...+.+|++|.+
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-------~~~~~~H~~f~~   72 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFAT   72 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEEC
T ss_pred             ceeEeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCc--cccceecccc-------cCCCccceeEEe
Confidence            358899999 99999       899999988776666666667776543  2344555321       124689999999


Q ss_pred             CCHH---HHHHHHhHHHHhcCCee--ecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          101 DDVY---KSAEVVNLVTQELGGKI--TRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~Di~---~~~~~L~~~~~~~Gv~i--~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .+++   +++++|    +++|+..  ...|.....+...++||+|||||+|||+....
T Consensus        73 ~~~~~v~~~~~~l----~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          73 HEKHNIIQICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SSHHHHHHHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccchhHHHHHHHH----HHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            9765   444455    6889864  34555443444578999999999999988543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.3e-15  Score=108.19  Aligned_cols=120  Identities=17%  Similarity=0.209  Sum_probs=88.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCc--EEEEEeeccCCCCceEEEEeeeCCCcc-------cccC
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVTE-------YTKG   90 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~--~~~~~l~~~~~~~~~~leL~~~~~~~~-------~~~g   90 (161)
                      ..++++||+ +|+|+        ++|||++..+...+.+.  ...+.+..+    ...++|........       ...+
T Consensus         8 ~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~g   83 (149)
T d1sqia1           8 RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGDHLVKHG   83 (149)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             ceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhhhhhhCC
Confidence            347899999 99999        89999998887654332  333344433    35666754332211       1246


Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCC--ceEEEEEECCCCCEEEEEecCCchh
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNEDFLK  156 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~--~~~~~f~~DPDG~~IEl~~~~~~~~  156 (161)
                      .|+.||||.|+|+++++++|    +++|+++..+|......  ..++++++.|+|..+||+|+..+..
T Consensus        84 ~G~~hiaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g  147 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG  147 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCS
T ss_pred             CeEEEEEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcC
Confidence            78999999999999999999    69999999888754332  2367899999999999999876653

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.60  E-value=2e-15  Score=108.95  Aligned_cols=117  Identities=18%  Similarity=0.199  Sum_probs=87.5

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCc--------c--c
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVT--------E--Y   87 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~--------~--~   87 (161)
                      .+.+++||+ +|+|+        ++|||++..+...+.+  ....+.+..+    ...++|.......        +  .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhh
Confidence            467899999 99999        8999999988754432  2334455543    4667776433221        0  1


Q ss_pred             ccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCC--ceEEEEEECCCCCEEEEEecCC
Q 031367           88 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        88 ~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~--~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ..+.|+.||||.|+|+++++++|    +++|+++..+|......  ..+++++++|+|..++|+++..
T Consensus        80 ~~g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          80 EHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             cCCCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            23568999999999999999999    69999999988754332  2468999999999999999744

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.60  E-value=5.1e-15  Score=104.96  Aligned_cols=108  Identities=18%  Similarity=0.139  Sum_probs=76.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEE
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI   98 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf   98 (161)
                      +.+++|+||. .|+|+        ++|||++..+..    .+. .+.+.+. .....+.+...       ...+..|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~-~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTI-YLRSLEE-FIHHNLVLRQG-------PIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEE-EEECTTC-CSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cce-eeecccc-cccceeecccc-------CCCCCceeeE
Confidence            4578999999 99999        899999987632    122 2222222 12233333211       2246789999


Q ss_pred             EeC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           99 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        99 ~V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .+.   |+++++++|    +++|+++...|....++..+.+||+|||||+|||+...
T Consensus        79 ~~~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EESSHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeccchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            997   466777777    79999998877766665567899999999999999853

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.57  E-value=4.3e-15  Score=102.59  Aligned_cols=109  Identities=16%  Similarity=0.078  Sum_probs=74.0

Q ss_pred             ceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeC-----CCc-ccccCCCeeEEE
Q 031367           32 PLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-----GVT-EYTKGNAYAQVA   97 (161)
Q Consensus        32 ~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~-----~~~-~~~~g~g~~Hia   97 (161)
                      +|+|++ .|+|+       +.|||.+.......  .+.  ++..++   ...+.+....     ... ..+...+..|++
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~--~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   74 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSA--PHT--EAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   74 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGC--SEE--EEECGG---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccc--cce--eeeccc---eeeeeecccccccccCCCCCCCccccceeEe
Confidence            699999 99999       66999875543322  232  222221   2344442110     001 111223456999


Q ss_pred             EEeCC---HHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           98 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        98 f~V~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      |.|+|   +++++++|    +++|+++..+|...+++ .+.+||+|||||+|||+++.
T Consensus        75 ~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          75 FEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EECSSHHHHHHHHHHH----HHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC
T ss_pred             eeeccchhhHHHHHHH----HhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEecC
Confidence            99997   56677777    69999999999888775 68999999999999999864

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.56  E-value=7.5e-15  Score=102.44  Aligned_cols=104  Identities=18%  Similarity=0.182  Sum_probs=74.4

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +.+|.||+ .|+|+        ++|||++..+...    .  +++..+.  .+..+.|..  +     ...+..|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~----~--~~l~~~~--~~~~l~l~~--~-----~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN----G--DLFRIDS--RAWRIAVQQ--G-----EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----E--EEEESSS--BSCSEEEEE--C-----TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCCc----c--eEEeecC--CceEEEEec--C-----CCCCceEEEEEE
Confidence            46799999 99999        9999999877531    2  4555443  234455532  1     124678999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCeeecCCcccC--CCceEEEEEECCCCCEEEEEecC
Q 031367          101 DD---VYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~--~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .+   +++++++|    +++|+++...|....  .+..+.+||+|||||+|||+...
T Consensus        67 ~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHH----HHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            75   45666777    699999998775321  12357899999999999998653

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=1.8e-14  Score=100.11  Aligned_cols=103  Identities=22%  Similarity=0.198  Sum_probs=71.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      |+.+|+||+ .|+|+        ++|||++..+.+.    .  .++..+    ...+.+.......  ....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~--~~~~~~----~~~~~~~~~~~~~--~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----G--AYLELG----SLWLCLSREPQYG--GPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----E--EEEEET----TEEEEEEECTTCC--CCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----e--eeeecC----CeEEEEeeecccc--ccccccccchhc
Confidence            567899999 99999        9999999877532    2  233333    2445553322211  122345677766


Q ss_pred             e--CCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367          100 T--DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       100 V--~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +  +|+++++++|    +++|+++...+.    +..+.+||+|||||+|||...
T Consensus        69 ~~~~dl~~~~~~l----~~~G~~~~~~~~----~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQL----RAHGVREWKQNR----SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHH----HHTTCCEEECCC----SSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHH----HHCCCcCccCCC----cceeEEEEECCCCCEEEEEEC
Confidence            6  5899999999    599999876543    235789999999999999875

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.56  E-value=2.6e-14  Score=95.53  Aligned_cols=98  Identities=12%  Similarity=0.033  Sum_probs=69.9

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHH
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  105 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~  105 (161)
                      ++. .|+|+        ++|||++..+..    .+.. +....    .....+.......   .+.+..|++|.|+|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~-~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVT-HASPL----EAHAQVSFAREGG---SGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEE-EEEEE----EEEEEEEEESSSB---TTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeE-ecccc----ccceeeecccccC---CCCceeEEEEEecCHHH
Confidence            577 99999        999999976632    2332 22211    1222222221111   22344699999999999


Q ss_pred             HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEE
Q 031367          106 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  149 (161)
Q Consensus       106 ~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~  149 (161)
                      +++++    +++|+++..+|...+++ .+.+||+|||||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            99999    69999999999988875 68999999999999986

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.55  E-value=2.9e-14  Score=100.20  Aligned_cols=109  Identities=13%  Similarity=0.121  Sum_probs=71.4

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS   99 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~   99 (161)
                      .+++|+||. .|+|+        ++|||++..+...  +.+.  ...... .....+.+... +      ..+..|++|.
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~-~------~~~~~~~~~~   71 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GRVY--LKAWTE-VDKFSLVLREA-D------EPGMDFMGFK   71 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SCEE--EECTTC-CBSCSEEEEEC-S------SCEEEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Cccc--eecccc-cceeecccccc-C------cccceeeeee
Confidence            368999999 99999        9999999876432  2221  122111 11222333211 1      1234555555


Q ss_pred             eC---CHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367          100 TD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       100 V~---Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +.   |+++++++|    +++|+++...|....++.++.+||+|||||.|||++...
T Consensus        72 ~~~~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          72 VVDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             ESCHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             ehhHHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            54   677888888    699999987776544444689999999999999997543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=1.8e-14  Score=104.05  Aligned_cols=117  Identities=15%  Similarity=0.110  Sum_probs=84.3

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCc--EEEEEeeccCCCCceEEEEeeeCCC------------
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGV------------   84 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~--~~~~~l~~~~~~~~~~leL~~~~~~------------   84 (161)
                      +.+.+++||+ +|+|+        ++|||++..+...+.+.  .....+..+    ...+.+......            
T Consensus         8 ~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~   83 (167)
T d1sqda1           8 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTT   83 (167)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCC
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC----CeeEEEeccccccccccccccccc
Confidence            4567899999 99999        89999999887654322  111122222    223333211110            


Q ss_pred             ---c--c--------cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           85 ---T--E--------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        85 ---~--~--------~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                         .  .        ..++.|+.||||.|+|+++++++|    +++|+++..+|...+++ .++++++.+++..++|+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r  158 (167)
T d1sqda1          84 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSY  158 (167)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEE
T ss_pred             cccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEec
Confidence               0  0        013468999999999999999999    69999999999887654 7889999999999999999


Q ss_pred             CC
Q 031367          152 ED  153 (161)
Q Consensus       152 ~~  153 (161)
                      ..
T Consensus       159 ~~  160 (167)
T d1sqda1         159 KA  160 (167)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.54  E-value=1.6e-14  Score=100.89  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=74.4

Q ss_pred             CcceeEEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEe
Q 031367           30 DLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  100 (161)
Q Consensus        30 ~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V  100 (161)
                      +.+|+||+ .|+|+        ++|||++..+..    ..  +|+..++  .+..+.+..  +     ...+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~l~~~~--~~~~l~~~~--~-----~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DA--ALYRADQ--RAWRIAVQP--G-----ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TE--EEEESSS--BSCSEEEEE--C-----TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ce--eeeeeee--cceeeeeec--c-----CCCCceEEEEEe
Confidence            56899999 99999        999999977653    12  4565543  233454532  1     224688999999


Q ss_pred             CC---HHHHHHHHhHHHHhcCCeeecCCcccCC--CceEEEEEECCCCCEEEEEecCC
Q 031367          101 DD---VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus       101 ~D---i~~~~~~L~~~~~~~Gv~i~~~p~~~~~--~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      .+   ++++.++|    +++|+++.+.|.....  +..+.+||+|||||+|||+....
T Consensus        67 ~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~  120 (132)
T d1kw3b1          67 DDAAALERMADKL----RQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (132)
T ss_dssp             SSHHHHHHHHHHH----HHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             ccHHHHHHHHHHH----HHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCC
Confidence            75   55666666    6999999987753211  12467899999999999997544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.52  E-value=1.7e-14  Score=105.17  Aligned_cols=120  Identities=15%  Similarity=0.073  Sum_probs=87.7

Q ss_pred             CCCcceeEEE-eeCCc--------cccCCEEEEEEeCCCCc--EEEEEeeccCCCCceEEEEeeeCCC------------
Q 031367           28 PKDLPLNDVV-FVGSL--------QALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGV------------   84 (161)
Q Consensus        28 ~~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~--~~~~~l~~~~~~~~~~leL~~~~~~------------   84 (161)
                      ...++++||+ +|+|+        ++|||++..+.....+.  +....+..+    ...+.+......            
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   84 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSF   84 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTC
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC----CeeeEEeeccCCCchhhhcccccC
Confidence            3557899999 99999        89999999887654432  222223322    233444221110            


Q ss_pred             cc-------cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCCchh
Q 031367           85 TE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  156 (161)
Q Consensus        85 ~~-------~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~~~~  156 (161)
                      .+       ..++.|+.||||.|+|+++++++|    +++|+++..+|.+..++ .++++++.|.+.++||+++.+...
T Consensus        85 ~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~~~~  158 (172)
T d1sp8a1          85 SAAAARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAA  158 (172)
T ss_dssp             CHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGG
T ss_pred             CcchhhhhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCCCCC
Confidence            00       124568999999999999999999    69999999999877664 689999999999999999976443

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.36  E-value=5.5e-12  Score=90.33  Aligned_cols=111  Identities=14%  Similarity=0.090  Sum_probs=71.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeC---CCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEE
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDK---PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV   96 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~---~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hi   96 (161)
                      ...+|+|++ .|+|+        ++|||++......   ........|+....  ....+.+..  .    +...+++|+
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~a~~~--~----~~~~gl~Hi   78 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAA--F----PIPKRIHHF   78 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEEC--C----SCSSSEEEE
T ss_pred             CCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecc--ccceeeecc--C----CCCCceeEE
Confidence            347899999 99999        8999998655322   12223334555432  123333321  1    123479999


Q ss_pred             EEEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCC-EEEEEecC
Q 031367           97 AISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDNE  152 (161)
Q Consensus        97 af~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~-~IEl~~~~  152 (161)
                      ||.|+++++   ++++|    +++|+.+. .|..-..+....+|++||||+ .+|+....
T Consensus        79 af~v~~~ddv~~~~d~l----~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          79 MLQANTIDDVGYAFDRL----DAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEEBSSHHHHHHHHHHH----HHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEECCCHHHHHHHHHHH----HhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            999987654   45555    79998754 454433233578999999998 69998754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.34  E-value=8.8e-12  Score=84.55  Aligned_cols=97  Identities=20%  Similarity=0.243  Sum_probs=66.2

Q ss_pred             eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHHH
Q 031367           38 FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV  110 (161)
Q Consensus        38 ~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~L  110 (161)
                      .|+|+       +.|||++.+...    .+  +++...    ...+.+.......  +. ....|+++.|+|++++++++
T Consensus         9 ~v~Dl~~s~~FY~~LGf~~~~~~~----~~--~~~~~~----~~~~~~~~~~~~~--~~-~~~~~~~~~~~d~~~~~~~~   75 (120)
T d1ecsa_           9 PSRDFDSTAAFYERLGFGIVFRDA----GW--MILQRG----DLMLEFFAHPGLD--PL-ASWFSCCLRLDDLAEFYRQC   75 (120)
T ss_dssp             EESCHHHHHHHHHTTTCEEEEECS----SE--EEEEET----TEEEEEEECTTCC--GG-GCCCEEEEEESCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHcCCeeEEecC----ce--eeeecc----eeccccccccccc--cC-CCCcEEEEEECCHHHHHHHH
Confidence            67888       569999987532    23  233332    2445554332222  12 23469999999999999999


Q ss_pred             hHHHHhcCCeeec-------CCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367          111 NLVTQELGGKITR-------QPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus       111 ~~~~~~~Gv~i~~-------~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                          +++|+.+..       +|...++| .+.+||+|||||+|||.|..
T Consensus        76 ----~~~~~~~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          76 ----KSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             ----HHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECC
T ss_pred             ----hhhhhhhccccccccccceecCCC-cEEEEEECCCCCEEEEEEcc
Confidence                477777644       45566665 68899999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.26  E-value=3.5e-11  Score=85.95  Aligned_cols=109  Identities=13%  Similarity=0.122  Sum_probs=79.4

Q ss_pred             CCcceeEEE-eeCCc-------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcc------cccCCCee
Q 031367           29 KDLPLNDVV-FVGSL-------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYA   94 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl-------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~------~~~g~g~~   94 (161)
                      ...+|+||. .|+|+       +.|||+...+....  ..  ..+..+    .  +.|+.+.....      ..++.|+.
T Consensus         6 g~~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~~~~--~~--~l~~~G----~--i~ll~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           6 GLMGFEFIEFASPTPGTLEPIFEIMGFTKVATHRSK--NV--HLYRQG----E--INLILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHHHHTTCEEEEEESSS--SE--EEEEET----T--EEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             ccCCEEEEEEecCCHHHHHHHHHHhCCEEEecccce--EE--EEEecC----c--EEEEecCCCCCHhHhHHhhCCCceE
Confidence            468999999 99999       77999998875432  22  234432    2  33333333221      13577999


Q ss_pred             EEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           95 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        95 Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      ||||+|+|++++++++    +++|+++..+|..  .+......+++|+|.+|.|+++..
T Consensus        76 hiaf~V~D~~~a~~~a----~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRA----LELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             EEEEEeCCHHHHHHHH----HHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCC
Confidence            9999999999999999    5999998866542  223457889999999999999854

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.19  E-value=9.3e-11  Score=79.15  Aligned_cols=95  Identities=11%  Similarity=-0.026  Sum_probs=64.2

Q ss_pred             eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHHHHHH
Q 031367           38 FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV  109 (161)
Q Consensus        38 ~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~~~~~  109 (161)
                      .|+|+        ++|||++.++..    .+  +++..+    ...+.|.... .. ..  ....|+++.+.|+++++++
T Consensus        12 ~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~----~~~l~l~~~~-~~-~~--~~~~~~~~~~~~i~~~~~~   77 (122)
T d1jifa_          12 TAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG----DIRLHISRTE-HQ-IV--ADNTSAWIEVTDPDALHEE   77 (122)
T ss_dssp             EESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET----TEEEEEEECS-CH-HH--HTTCEEEEEESCHHHHHHH
T ss_pred             EcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee----eeeeeeeccc-cc-cc--cceeEEEEeechhHHHHHH
Confidence            89999        999999977632    23  344443    3556664322 11 11  1235899999999999999


Q ss_pred             HhHHHHhcCCeeecCCcc-------cCCCceEEEEEECCCCCEEEEEec
Q 031367          110 VNLVTQELGGKITRQPGS-------IPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus       110 L~~~~~~~Gv~i~~~p~~-------~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +    +++++.....+..       .+++ ++.+||+|||||+|||.+.
T Consensus        78 ~----~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          78 W----ARAVSTDYADTSGPAMTPVGESPA-GREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             H----HTTSCSCTTCTTSCEECCCEEETT-EEEEEEECTTCCEEEEEEC
T ss_pred             H----HhhcceEEeeccccccCccccCCC-eEEEEEECCCCCEEEEEeC
Confidence            9    4777765543321       1222 5889999999999999874

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.13  E-value=1e-10  Score=80.86  Aligned_cols=53  Identities=13%  Similarity=0.082  Sum_probs=48.2

Q ss_pred             eeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           93 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        93 ~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      ..+|++.|+|+++++.++    +++|+++..+|...+|+ .++++|+||+||.|+|.|
T Consensus        83 ~~~l~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          83 GVTFLLGTKDAEAAVAKA----VDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CCEEEEECSCHHHHHHHH----HHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             ceEEEEeecCcceeEEEe----ecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            359999999999999998    59999999999988886 688999999999999975

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.12  E-value=4.2e-10  Score=75.24  Aligned_cols=100  Identities=13%  Similarity=0.017  Sum_probs=64.3

Q ss_pred             EEE-eeCCc--------cccCCEEEEEEeCCCCcEEEEEeeccCCCCceEEEEeeeCCCcccccCCCeeEEEEEeCCHHH
Q 031367           35 DVV-FVGSL--------QALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  105 (161)
Q Consensus        35 Hv~-~V~Dl--------~vLG~~~~~~~~~~~g~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~g~g~~Hiaf~V~Di~~  105 (161)
                      +.. .|+|+        ++|||++.++..    .+  .++..+    ...+.+..... .   ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~--~~~~~~----~~~l~~~~~~~-~---~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DF--AGVVRD----DVTLFISAVQD-Q---VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SE--EEEEET----TEEEEEEECSC-T---TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----Ce--eEEecc----cceeecccccc-c---cCCCCceEEEeeccHHH
Confidence            344 79999        899999987642    23  233333    24455532221 1   12234689999999988


Q ss_pred             HHHHHhH----HHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367          106 SAEVVNL----VTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus       106 ~~~~L~~----~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .++++.+    .++..|..+..+|...++  ++.+||+|||||+|||++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            8887742    123344444555665554  578999999999999985

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.87  E-value=3.6e-09  Score=78.84  Aligned_cols=89  Identities=17%  Similarity=0.212  Sum_probs=61.2

Q ss_pred             cceeEEE-eeC--Cc--------cccCCEEEEEEeCCCC--cEEEEEeeccCCCCceEEEEeeeCCCc-----c---ccc
Q 031367           31 LPLNDVV-FVG--SL--------QALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVT-----E---YTK   89 (161)
Q Consensus        31 ~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~leL~~~~~~~-----~---~~~   89 (161)
                      .+|+||+ .|+  |+        ++|||+..+..+.++.  ......+..+.  ....+.+.......     .   ...
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~--~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc--cccceecccCCCCCccHHHHHHHhcC
Confidence            5799999 998  77        9999999888664432  22323334332  23444443332211     1   124


Q ss_pred             CCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           90 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        90 g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                      +.|++||||.|+|+.+++++|    +++|+++...|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHH----HhcCCccccCc
Confidence            568999999999999999999    69999998755

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.82  E-value=1.4e-08  Score=76.58  Aligned_cols=95  Identities=16%  Similarity=0.156  Sum_probs=61.7

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCC-----CCcEEEEEeeccCCCCceEEEEeeeCCC---cc-----
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGV---TE-----   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~-----~g~~~~~~l~~~~~~~~~~leL~~~~~~---~~-----   86 (161)
                      ...+|+||+ .|+|+        ++|||+..++....     .+......+..++  +...+.|.....+   ..     
T Consensus         6 Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~--g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC--CccceeeeeecCCCCCccHHHHH
Confidence            457899999 99999        89999998875432     2234444454443  3455555432111   11     


Q ss_pred             --cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           87 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        87 --~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                        ...+.|++||||.|+|+.+++++|.+...+.|+++...|
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence              123468999999999999999999543344567777655

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.67  E-value=3.9e-07  Score=62.71  Aligned_cols=54  Identities=13%  Similarity=0.060  Sum_probs=43.8

Q ss_pred             eeEEEEEeCCHHH--HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           93 YAQVAISTDDVYK--SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        93 ~~Hiaf~V~Di~~--~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      -.++++.+++.+.  .+.+.    .++|++++.+|.+.+|+ .++++|+||+|+.|+|...
T Consensus        80 ~~~~~l~~~~~d~~~~~~~~----l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          80 GCSISLNVDSKAEAERLFNA----LAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             SEEEEEECSSHHHHHHHHHH----HHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEES
T ss_pred             cEEEEEEcCCHHHHHHHHhh----cccCceeecCccccCCC-cEEEEEECCCCCEEEEEec
Confidence            3589999987653  23333    47899999999999996 6889999999999999865

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=9e-08  Score=71.46  Aligned_cols=91  Identities=15%  Similarity=0.216  Sum_probs=59.3

Q ss_pred             CCcceeEEE-eeCC--c--------cccCCEEEEEEeCC-----CCcEEEEEeeccCCCCceEEEEeeeCCCc------c
Q 031367           29 KDLPLNDVV-FVGS--L--------QALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGVT------E   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~D--l--------~vLG~~~~~~~~~~-----~g~~~~~~l~~~~~~~~~~leL~~~~~~~------~   86 (161)
                      ...+|+||+ .|+|  +        ++|||+..+..+..     .+......+..+.  +...+.|..+....      .
T Consensus        21 gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          21 NLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CHHHH
T ss_pred             CcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccHHHH
Confidence            457799999 9997  6        89999986653211     1222222334332  34555553222111      1


Q ss_pred             ---cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           87 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        87 ---~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                         ...|.|++||||.|+|+.+++++|    +++|+++...|
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P  136 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVP  136 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCC
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence               134679999999999999999999    69999999877

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.51  E-value=5.3e-07  Score=68.01  Aligned_cols=92  Identities=13%  Similarity=0.153  Sum_probs=59.0

Q ss_pred             CCcceeEEE-eeCCc--------cccCCEEEEEEeCCC-----CcEEEEEeeccCCCCceEEEEeeeCCC---cc-----
Q 031367           29 KDLPLNDVV-FVGSL--------QALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNYGV---TE-----   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~Dl--------~vLG~~~~~~~~~~~-----g~~~~~~l~~~~~~~~~~leL~~~~~~---~~-----   86 (161)
                      ...+|+||+ .|+|+        ++||+...+.....+     +.....-+..+.  +...+.|......   ..     
T Consensus        19 gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~--g~v~~~l~E~~~~~~~~sqi~~F   96 (230)
T d1sqda2          19 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQTY   96 (230)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHHH
T ss_pred             CcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC--cccceeEEeecCCCCCcchHHHH
Confidence            457899999 99998        899999888754321     223333333332  3455655432111   11     


Q ss_pred             --cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeee
Q 031367           87 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  122 (161)
Q Consensus        87 --~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~  122 (161)
                        ...|.|.+||||.|+|+.+++++|.+.....|+++.
T Consensus        97 L~~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          97 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             HhhccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence              134679999999999999999999643333577765

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.41  E-value=4.9e-07  Score=66.80  Aligned_cols=91  Identities=10%  Similarity=0.168  Sum_probs=60.1

Q ss_pred             CCcceeEEE-eeC--Cc--------cccCCEEEEEEeC-----CCCcEEEEEeeccCCCCceEEEEeeeCCC--cc----
Q 031367           29 KDLPLNDVV-FVG--SL--------QALGMKLLRTVDK-----PEYKYTLAMLGYAEEDQTTVLELTYNYGV--TE----   86 (161)
Q Consensus        29 ~~~~i~Hv~-~V~--Dl--------~vLG~~~~~~~~~-----~~g~~~~~~l~~~~~~~~~~leL~~~~~~--~~----   86 (161)
                      +-.+|+||+ .|+  ++        ++|||+..++...     +.+.....-+..+.  ..+.+.|..+...  ..    
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~--~~v~l~lne~~~~~~~s~i~~   80 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAKKKSQIDE   80 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSSSCCHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc--cccceeecccCccccccchhh
Confidence            346899999 998  87        8999998765421     22233322233222  2444444321111  11    


Q ss_pred             ---cccCCCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC
Q 031367           87 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  125 (161)
Q Consensus        87 ---~~~g~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p  125 (161)
                         ...+.|++||||.|+|+.+++++|    +++|+++...|
T Consensus        81 FL~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p  118 (199)
T d1t47a2          81 YLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTP  118 (199)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCC
T ss_pred             hhhhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence               124568999999999999999999    69999999877

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.98  E-value=0.00015  Score=49.45  Aligned_cols=51  Identities=18%  Similarity=0.062  Sum_probs=41.1

Q ss_pred             eEEEEEeCCHH---HHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           94 AQVAISTDDVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        94 ~Hiaf~V~Di~---~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .++++.+++.+   +.++.|     ++|.+++.++...+|+ .++..|+||.|+.|.|.-
T Consensus        79 ~s~~l~~~~~d~~~~~~~~l-----~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          79 FSFFVDCESNAQIERLAEAL-----SDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             EEEEEECCCHHHHHHHHHHH-----HTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEE
T ss_pred             eEEEEEeccHHHHHHHHHHH-----hcCCEEecCccccccc-ceEEEEECCCCCEEEEEc
Confidence            47888888754   344444     7899999999998886 688999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.81  E-value=0.0013  Score=44.27  Aligned_cols=51  Identities=14%  Similarity=0.088  Sum_probs=41.1

Q ss_pred             EEEEEeCCHHH---HHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           95 QVAISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        95 Hiaf~V~Di~~---~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ++.+.+++.++   ++++|     ++|.+++.++...+++ .++..|+||.|+.|-|..+
T Consensus        75 s~~v~~~~~~e~~~~~~~L-----~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          75 SLFVTVKDTIEMERLFNGL-----KDEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CEEEECSSHHHHHHHHHHH-----HTTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEeccCCHHHHHHHHHHh-----ccCCEEeccccccccc-ceEEEEECCCCCEEEEeCC
Confidence            57788887654   55566     6788999999988885 6889999999999999875

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.47  E-value=0.02  Score=36.01  Aligned_cols=53  Identities=17%  Similarity=0.340  Sum_probs=40.9

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecCC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  153 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~~  153 (161)
                      +++||.+.|+|++++.+-..   +-.|.++...+.      ...+|+.++++..+.+.+...
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~---~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLE---KYFGLTCSGTRG------NAFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHH---HHHCCEEEEEET------TTEEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhhCCEEEEeec------Ccceeeeecceeeeeeeeeec
Confidence            57899999999998877765   458998764331      246788999999999988654

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.017  Score=38.64  Aligned_cols=58  Identities=12%  Similarity=0.113  Sum_probs=36.4

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      .+++||+|.|.|++++.+-..   +..|.+................++..-++..++|.+.
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~---~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   67 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYC---NKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA   67 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHH---HHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHh---hccceEEEEEecccCCceEEEEEEecCCcEEEEEEec
Confidence            378999999999999888775   5789986643222111112333333334556677664

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.69  E-value=0.046  Score=35.85  Aligned_cols=57  Identities=18%  Similarity=0.259  Sum_probs=40.3

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcc----------cCCCceEEEEEECCCC-CEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS----------IPGLNTKITSFVDPDG-WKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~----------~~~~~~~~~f~~DPDG-~~IEl~~~  151 (161)
                      .+++|+++.|+|++++.+-.+    +.|.+.......          .+....+.+++..++| ..++|++.
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~----~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~   75 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFE----EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   75 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHH----HHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CEEeEEEEEeCCHHHHHHHHH----HcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEee
Confidence            368999999999999888874    689886643211          1122246788888886 57888764

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=94.65  E-value=0.037  Score=37.61  Aligned_cols=59  Identities=12%  Similarity=0.152  Sum_probs=38.6

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~~  152 (161)
                      .+++|++|.|.|++++.+-..   +..|.+................++....+..++|.+..
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~---~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~   64 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYS---TAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVI   64 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEES
T ss_pred             ceEeEEEEEeCCHHHHHHHHH---HHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccC
Confidence            468999999999999888886   57899866422111111133334434456778888864

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=94.14  E-value=0.11  Score=33.50  Aligned_cols=58  Identities=7%  Similarity=-0.018  Sum_probs=39.8

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEE-----CCCCCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-----DPDGWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~-----DPDG~~IEl~~~~  152 (161)
                      .+++||++.|+|++++.+-..   +..|.+.......... .....+..     ...+..+|+.+..
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~---~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~el~~~~   68 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQ---ETFGWHELHREENPEQ-GVVEIMMAPAAKLTEHMTQVQVMAPL   68 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEEETTT-TEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             eEEeEEEEEeCCHHHHHHHHH---hhccCceeeeeeeccc-ceEEEeeeceeccccccchhhhhhhh
Confidence            478999999999999999886   5688886644332222 23334433     3467799999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=92.37  E-value=0.12  Score=33.81  Aligned_cols=59  Identities=8%  Similarity=0.072  Sum_probs=38.2

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC---CCEEEEEecC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVDNE  152 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD---G~~IEl~~~~  152 (161)
                      .|++||++.|.|++++.+-..   +-.|.++............+.+++.+..   +..+++....
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~---~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   66 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYK---NVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIP   66 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHH---TTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECT
T ss_pred             cceeeEEEEeCCHHHHHHHHH---HHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccc
Confidence            479999999999998887775   5689987654322222223455566654   3556655543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=92.10  E-value=0.17  Score=34.58  Aligned_cols=29  Identities=21%  Similarity=0.281  Sum_probs=25.3

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITR  123 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~  123 (161)
                      +++||+|.|.|++++.+-..   ...|.+...
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~---~~LGf~~v~   41 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFS---FGLGAPLAA   41 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHH---HHHTCCEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHH---HhhCceEEE
Confidence            79999999999999988886   679998764

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.58  E-value=0.32  Score=32.65  Aligned_cols=57  Identities=9%  Similarity=0.151  Sum_probs=35.2

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEe
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  150 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~  150 (161)
                      .+++||+|.|.|++++.+-..   +..|.+................+.....+..+.+..
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~---~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   67 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFS---WGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA   67 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHH---HHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHH---HHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEec
Confidence            378999999999999888875   569998654322111111344444444455555544

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=89.92  E-value=0.59  Score=29.48  Aligned_cols=56  Identities=4%  Similarity=0.050  Sum_probs=35.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      +++|+++.|.|++++.+-..   +..|.++...............++. ..+..+++...
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~---~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   59 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILE---GVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQG   59 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEEC
T ss_pred             cEeEEEEEeCCHHHHHHHHH---HhcCCEEEEEcCCccccceeEEEEe-cCCEEEeeccc
Confidence            68999999999998877776   5689887754332222112233333 24456666554

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.78  E-value=1.2  Score=29.63  Aligned_cols=48  Identities=15%  Similarity=0.072  Sum_probs=31.4

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCC
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD  142 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPD  142 (161)
                      -.++|+++.|+|++++.+-..   +-.|.++....... ......+|....+
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~---~vLG~~~~~~~~~~-~~~~~~~~~~~~~   69 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYT---RVLGMTLIQKCDFP-IMKFSLYFLAYED   69 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHH---HTTCCEEEEEEEET-TTTEEEEEEESCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHH---HhhCCeEeeeeccc-CCceEEEEeecCC
Confidence            368999999999999888775   45899876433221 2223445555443

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=83.78  E-value=1.9  Score=30.77  Aligned_cols=58  Identities=5%  Similarity=-0.074  Sum_probs=37.9

Q ss_pred             CCeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCC----cccCCCceEEEEEECCCC-CEEEEEec
Q 031367           91 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP----GSIPGLNTKITSFVDPDG-WKTVLVDN  151 (161)
Q Consensus        91 ~g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p----~~~~~~~~~~~f~~DPDG-~~IEl~~~  151 (161)
                      ..+.||++.|+|++++.+-.+   .-.|......-    ...+....+...+..|+| ..+++.++
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~---~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~   70 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFA---GFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEP   70 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHH---HHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEE
T ss_pred             CeeeeeEEeccCHHHHHHHHH---HHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeee
Confidence            368999999999998887775   45788744321    111222246777899997 56777765

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.99  E-value=2  Score=28.96  Aligned_cols=48  Identities=15%  Similarity=0.085  Sum_probs=32.6

Q ss_pred             ccCCCeeEEEEEeCCH---HHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEECCCCCEEEEEec
Q 031367           88 TKGNAYAQVAISTDDV---YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  151 (161)
Q Consensus        88 ~~g~g~~Hiaf~V~Di---~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~DPDG~~IEl~~~  151 (161)
                      ..++++ +|.+.++|.   ++++++|     +.|.++..+          +..|+|+-|..|.|+.+
T Consensus        69 ~~~~~~-sl~l~~d~~eE~d~~f~~L-----segG~~~~~----------~G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          69 RHSEAF-SFQVATDDQAETDRLWNAI-----VDNGGEESA----------CGWCRDKWGISWQITPR  119 (156)
T ss_dssp             CCCTTE-EEEEEESSHHHHHHHHHHH-----HHTTCEECS----------TTEEECTTSCEEEEEEH
T ss_pred             CCCCCe-EEEEecCCHHHHHHHHHHH-----hccCCCCCC----------CeEEECCCCCEEEeChH
Confidence            344554 899999985   4555555     344444321          23699999999999977

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=82.85  E-value=1.7  Score=28.74  Aligned_cols=30  Identities=13%  Similarity=0.260  Sum_probs=24.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  124 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~  124 (161)
                      ++.|+++.|+|++++.+-..   +..|.++.+.
T Consensus         5 rldHv~l~v~Dle~s~~FY~---~vLG~~~~~~   34 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFT---KVLGFYLAEQ   34 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTCCEEEEE
T ss_pred             cccEEEEECCCHHHHHHHHH---HccCCEEEEE
Confidence            58999999999998877776   5689987653

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.80  E-value=1.5  Score=29.56  Aligned_cols=55  Identities=15%  Similarity=0.103  Sum_probs=33.7

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecCCcccCCCceEEEEEE-CCCCCEEEEEec
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDGWKTVLVDN  151 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~p~~~~~~~~~~~f~~-DPDG~~IEl~~~  151 (161)
                      +++||++.|.|++++.+-.    +..|.++...... +.+....+|.. +..-+.+.+...
T Consensus         5 rl~Hv~l~v~Dle~s~~FY----e~LGf~~~d~~~~-~~~~~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYL----EDLGFRVSEDIKD-SDGVTYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHH----HHTTCEEEEEEEC-TTCCEEEEEEESSSSSCSEEEEES
T ss_pred             EeeeEEEEcCCHHHHHHHH----HHCCCEEEEEEec-CCcceeeeeeccCccccceecccc
Confidence            5789999999999876544    4689987643221 12223344443 445566665554

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=82.10  E-value=1.3  Score=28.25  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=24.1

Q ss_pred             CeeEEEEEeCCHHHHHHHHhHHHHhcCCeeecC
Q 031367           92 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ  124 (161)
Q Consensus        92 g~~Hiaf~V~Di~~~~~~L~~~~~~~Gv~i~~~  124 (161)
                      ++.||+|.|+|++++.+-..   +-.|.++...
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~---~vLG~~~~~~   33 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLT---QKLGLMEAGT   33 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHH---HTTCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHH---HhhCCceeec
Confidence            57899999999998877775   4479987753