Citrus Sinensis ID: 031423

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
Secondary Structure (PSIPRED)
ccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccEEEEHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mdevitvgdaasfrsgqatsfldsppsssslffpnnlPLISAFLAFALAQFLKIFTTWYKekrwdskkmldsggmpsshsATVSALAVAIGlqegsgspSFAIAVVLACILLNQivcefppdhplssvrplrellghtplqvvAGGILGCVVAFLMRNSN
Flexible Loop (DISEMBL)
mdevitvgdaasfrsgqatSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
Low Complexity Region (SEG)
MDEVITVGDAASFRSGQATsfldsppsssslffpnnlplisaflafalaqflkifTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
Disordered region (IsUnstruct)
******************************LFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWD*****************VSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM****
Disordered Region (DISOPRED)
***************************SSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPD******RPLRELLGHTPLQVVAGGILGCVVAFLMRNS*
Disordered Region (DISEMBL)
MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKK**************VSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
Disordered Region (DISPRO)
*DEVITVGDAASFR****************LFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
O32107	158	Uncharacterized membrane	yes	no	0.762	0.772	0.288	2e-09

>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 27/149 (18%)

Query: 35  NNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE 94
            N PL+S+  A   AQ +K+   +   ++ D   +  +GGMPSSHSA V+AL+  + L+ 
Sbjct: 5   TNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEH 64

Query: 95  GSGSPSFAIAVVLACI-----------------LLNQIVC----------EFPPDHPLSS 127
           G  S  FA++ + A I                 ++N++V           +FP       
Sbjct: 65  GLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEK 124

Query: 128 VRPLRELLGHTPLQVVAGGILGCVVAFLM 156
            + L+ELLGH P++V  GG+ G ++  ++
Sbjct: 125 QKKLKELLGHQPIEVFFGGLTGILLTLVL 153

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
297835142	174	hypothetical protein ARALYDRAFT_898610 [	0.981	0.902	0.666	2e-61
30686309	174	Acid phosphatase/vanadium-dependent halo	0.981	0.902	0.666	5e-61
449468382	167	PREDICTED: uncharacterized membrane prot	0.937	0.898	0.649	1e-57
388504270	169	unknown [Lotus japonicus]	0.95	0.899	0.683	2e-57
356543676	170	PREDICTED: uncharacterized membrane prot	0.95	0.894	0.646	2e-57
255576905	173	conserved hypothetical protein [Ricinus	0.975	0.901	0.672	2e-57
224116550	168	predicted protein [Populus trichocarpa]	0.937	0.892	0.623	6e-57
357453325	167	Membrane protein, putative [Medicago tru	0.931	0.892	0.662	2e-56
351724945	171	uncharacterized protein LOC100306390 [Gl	0.937	0.877	0.647	4e-56
388491672	167	unknown [Medicago truncatula]	0.781	0.748	0.753	5e-55

>gi|297835142|ref|XP_002885453.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata] gi|297331293|gb|EFH61712.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 140/177 (79%), Gaps = 20/177 (11%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+T  DA S   G   +   SPPS +   FP+NLP+ SAFLAFALAQFLK+FT WYK
Sbjct: 1   MDEVMTAADAGSLGGGN-RALYGSPPSQN--LFPHNLPIFSAFLAFALAQFLKVFTNWYK 57

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI---------- 110
           EK+WDSK+M+ SGGMPSSHSATV+ALAVAIGL+EG+G+P+FAIAVVLAC+          
Sbjct: 58  EKKWDSKRMISSGGMPSSHSATVTALAVAIGLEEGAGAPAFAIAVVLACVVMYDASGVRL 117

Query: 111 -------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                  LLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+++
Sbjct: 118 HAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRSTS 174

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686309|ref|NP_188798.2| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|22135978|gb|AAM91571.1| unknown protein [Arabidopsis thaliana] gi|23198278|gb|AAN15666.1| unknown protein [Arabidopsis thaliana] gi|332643008|gb|AEE76529.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 138/177 (77%), Gaps = 20/177 (11%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+T  D  S   G   +   SPPS +   FP+NLP+ SAFLAFALAQFLK+FT WYK
Sbjct: 1   MDEVMTAADVGSLGGGN-RALYGSPPSHN--LFPHNLPIFSAFLAFALAQFLKVFTNWYK 57

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI---------- 110
           EKRWDSK+M+ SGGMPSSHSATV+ALAVAIG +EG+G+P+FAIAVVLAC+          
Sbjct: 58  EKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDASGVRL 117

Query: 111 -------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                  LLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+S+
Sbjct: 118 HAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRSSS 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468382|ref|XP_004151900.1| PREDICTED: uncharacterized membrane protein YuiD-like [Cucumis sativus]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 115/177 (64%), Positives = 134/177 (75%), Gaps = 27/177 (15%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+TVGDAAS           S  +S   F  +NLPL+SAFLA A+AQFLK+FTTWYK
Sbjct: 1   MDEVMTVGDAAS----------SSIKTSPGPFLASNLPLLSAFLAGAIAQFLKLFTTWYK 50

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI---------- 110
           E++W+SK+MLDSGGMPSSHSATVSALAVAI  QEGSG P+FAIA+V AC+          
Sbjct: 51  ERKWESKRMLDSGGMPSSHSATVSALAVAIAFQEGSGGPAFAIALVFACVVMYDATGVRL 110

Query: 111 -------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                  LLNQIVCEFPP+HPLSS+RPLR+ LGHTPLQV+AG +LGCVVAFL+RN N
Sbjct: 111 HAGRQAELLNQIVCEFPPEHPLSSIRPLRDSLGHTPLQVIAGAVLGCVVAFLIRNQN 167

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504270|gb|AFK40201.1| unknown [Lotus japonicus]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/177 (68%), Positives = 138/177 (77%), Gaps = 25/177 (14%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+T+ D         T+   S PSSSS   P N PL+SAFLAFA+AQ LKIFTTWYK
Sbjct: 1   MDEVVTMADV--------TASTRSAPSSSSSTLPFNAPLLSAFLAFAIAQILKIFTTWYK 52

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI---------- 110
           EKRWDSK+MLDSGGMPSSHSATVSALA+AIGLQEG+GSP+FAIAVVL+CI          
Sbjct: 53  EKRWDSKRMLDSGGMPSSHSATVSALALAIGLQEGAGSPAFAIAVVLSCIVMYDASGVRL 112

Query: 111 -------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                  LLNQIVCE PP+HPLS+VRPLR+ LGHTPLQVVAGG+LGC++AFLMR+SN
Sbjct: 113 HAGRQAELLNQIVCELPPEHPLSTVRPLRDSLGHTPLQVVAGGLLGCIIAFLMRSSN 169

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543676|ref|XP_003540286.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/178 (64%), Positives = 137/178 (76%), Gaps = 26/178 (14%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLF-FPNNLPLISAFLAFALAQFLKIFTTWY 59
           M EV+T+ D         T+ L +  ++S+ +  P NLPL+SAFL+FALAQFLKIFT+WY
Sbjct: 1   MSEVLTMADV--------TANLQAATTASTPYALPTNLPLLSAFLSFALAQFLKIFTSWY 52

Query: 60  KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI--------- 110
           KEKRWDSK++LDSGGMPSSHSATVSALAVAIGLQEG+GS +FA+AVVLACI         
Sbjct: 53  KEKRWDSKRLLDSGGMPSSHSATVSALAVAIGLQEGAGSTAFAVAVVLACIVMYDASGVR 112

Query: 111 --------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                   LLNQIVCE PP+HP S+VRPLR+ LGHTPLQVVAGGILGC++AFLMR S+
Sbjct: 113 LHAGRQAELLNQIVCELPPEHPCSNVRPLRDSLGHTPLQVVAGGILGCIIAFLMRRSS 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576905|ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis] gi|223531209|gb|EEF33055.1| conserved hypothetical protein [Ricinus communis]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/177 (67%), Positives = 137/177 (77%), Gaps = 21/177 (11%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+TV DA S     ++S      +SS    P+NLPL+SAFL+ ALAQFLKIFT WYK
Sbjct: 1   MDEVMTVADARSAGQTTSSSSS----ASSFSGLPSNLPLLSAFLSCALAQFLKIFTNWYK 56

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI---------- 110
           E+RWDSKKM DSGGMPSSHSATV+ALA+AIGLQEG GSP+FAIA VLAC+          
Sbjct: 57  ERRWDSKKMFDSGGMPSSHSATVTALAMAIGLQEGPGSPAFAIAFVLACVVMYDATGVRL 116

Query: 111 -------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                  LLNQIVCEFPP+HPLSSVRPLRELLGHTPLQVVAG +LGC+VA+LMRN++
Sbjct: 117 HAGRQAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVVAGSLLGCIVAYLMRNTD 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116550|ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1| predicted protein [Populus trichocarpa]

 Score =  224 bits (572), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 140/178 (78%), Gaps = 28/178 (15%)

Query: 1   MDEVITVGDAAS-FRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWY 59
           MDEV+T  DA+S +RS        SPP+S     P+N+PL+SAFLAF+LAQFLK+FTTW+
Sbjct: 1   MDEVMTAADASSRYRSA------TSPPAS----LPSNIPLLSAFLAFSLAQFLKLFTTWF 50

Query: 60  KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI--------- 110
           KEKRWD+++ML SGGMPSSHSATV+ALA AIGLQEG+G+P+FA+A+VLAC+         
Sbjct: 51  KEKRWDARRMLGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVMYDATGVR 110

Query: 111 --------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                   LLNQIVCE PP+HP+S+VRPLR+ LGHTPLQVVAG +LGC++AFLMR+S+
Sbjct: 111 LHAGRQAELLNQIVCELPPEHPVSNVRPLRDSLGHTPLQVVAGAVLGCIIAFLMRSSS 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453325|ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula] gi|355485987|gb|AES67190.1| Membrane protein, putative [Medicago truncatula]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/178 (66%), Positives = 133/178 (74%), Gaps = 29/178 (16%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPN-NLPLISAFLAFALAQFLKIFTTWY 59
           M+EV+T  D  +           S  SS S F P+ NLPLISAFL+FALAQFLKIFTTWY
Sbjct: 1   MNEVLTRADVTA-----------STASSLSPFVPSSNLPLISAFLSFALAQFLKIFTTWY 49

Query: 60  KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI--------- 110
           KEKRWDSK++LDSGGMPSSHSATVSALAVAIG QEG GS  FAIAV+LACI         
Sbjct: 50  KEKRWDSKRLLDSGGMPSSHSATVSALAVAIGFQEGIGSSVFAIAVILACIVMYDATGVR 109

Query: 111 --------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                   LLNQIVCE PP+HPLS+VRPLR+ LGHTPLQVVAGG+LGC++AFLMR S+
Sbjct: 110 LHAGRQAELLNQIVCELPPEHPLSNVRPLRDSLGHTPLQVVAGGLLGCIIAFLMRKSS 167

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724945|ref|NP_001238099.1| uncharacterized protein LOC100306390 [Glycine max] gi|255628385|gb|ACU14537.1| unknown [Glycine max]

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 135/176 (76%), Gaps = 26/176 (14%)

Query: 3   EVITVGDAASFRSGQATSFLDSPPSSSSLF-FPNNLPLISAFLAFALAQFLKIFTTWYKE 61
           EV+T+ D         T+ L +  ++S+ +  P NLPL+SAFL+FALAQFLKIFT+WYKE
Sbjct: 4   EVLTMADV--------TANLQAATTASTPYALPTNLPLLSAFLSFALAQFLKIFTSWYKE 55

Query: 62  KRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI----------- 110
           KRWDSK++LDSGGMPSSHSATVSALAVAI LQEG+GSP+FAIAVVLACI           
Sbjct: 56  KRWDSKRLLDSGGMPSSHSATVSALAVAICLQEGAGSPAFAIAVVLACIVMYDATGVRLH 115

Query: 111 ------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 160
                 LLNQIVCE PP+HP S+VRPLR+ LGHTPLQVVAGG LGC++AFLMR S+
Sbjct: 116 AGRQAELLNQIVCELPPEHPCSNVRPLRDSLGHTPLQVVAGGTLGCIIAFLMRRSS 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491672|gb|AFK33902.1| unknown [Medicago truncatula]

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 118/142 (83%), Gaps = 17/142 (11%)

Query: 36  NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEG 95
           NLPLISAFL+FALAQFLKIFTTWYKEKRWDSK++LDSGGMPSSHSATVSALAVAIG QEG
Sbjct: 26  NLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLLDSGGMPSSHSATVSALAVAIGFQEG 85

Query: 96  SGSPSFAIAVVLACI-----------------LLNQIVCEFPPDHPLSSVRPLRELLGHT 138
            GS  FAIAV+LACI                 LLNQIVCE PP+HPLS+VRPLR+ LGHT
Sbjct: 86  IGSSVFAIAVILACIVMYDATGVRLHAGRQAELLNQIVCELPPEHPLSNVRPLRDSLGHT 145

Query: 139 PLQVVAGGILGCVVAFLMRNSN 160
           PLQVVAGG+LGC++AFLMR S+
Sbjct: 146 PLQVVAGGLLGCIIAFLMRKSS 167

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
TAIR|locus:2089950	174	AT3G21610 "AT3G21610" [Arabido	0.356	0.327	0.771	2e-47
TAIR|locus:2008575	163	AT1G67600 "AT1G67600" [Arabido	0.356	0.349	0.666	1.4e-31
UNIPROTKB|Q71X40	157	LMOf2365_2359 "Putative unchar	0.275	0.280	0.522	3.3e-13
UNIPROTKB|Q81YD7	141	BAS3352 "Uncharacterized prote	0.575	0.652	0.396	8.2e-12
TIGR_CMR|BA_3613	141	BA_3613 "conserved hypothetica	0.575	0.652	0.396	8.2e-12
TAIR|locus:505006336	213	AT3G12685 "AT3G12685" [Arabido	0.318	0.239	0.352	1.8e-09
TAIR|locus:2076790	284	AT3G61770 "AT3G61770" [Arabido	0.6	0.338	0.330	1.4e-08

TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
 Identities = 44/57 (77%), Positives = 54/57 (94%)

Query:    56 TTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILL 112
             T WYKEKRWDSK+M+ SGGMPSSHSATV+ALAVAIG +EG+G+P+FAIAVVLAC+++
Sbjct:    53 TNWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVM 109

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
 Identities = 38/57 (66%), Positives = 49/57 (85%)

Query:    56 TTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILL 112
             T+WYKE+RWD K+++ SGGMPSSHSATV+ALA+A+GLQEG G   FAIA+VL  I++
Sbjct:    38 TSWYKERRWDLKRLVGSGGMPSSHSATVTALALAVGLQEGFGGSHFAIALVLTTIVM 94

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 114 (45.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
 Identities = 23/44 (52%), Positives = 30/44 (68%)

Query:    69 MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILL 112
             M  +GGMPSSHSA V+AL   + ++ G  SP FAIAVV   I++
Sbjct:    39 MFSTGGMPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGIIVM 82

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 42/106 (39%), Positives = 59/106 (55%)

Query:    60 KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLN------ 113
             K   +D  K   SGGMPSSH++TV+ALA  +G+ EG  S  FAIA + A I++       
Sbjct:    31 KTGEFDFAKFFASGGMPSSHASTVTALATGVGVVEGVESTLFAIAAIFAIIVMYDASGVR 90

Query:   114 -------QIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVV 152
                    +I+ EF      +  + L EL+GHTP +VV G +LG +V
Sbjct:    91 LAVSKQAKILNEFFHGRQ-TEYKKLNELVGHTPYEVVVGALLGIIV 135

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 42/106 (39%), Positives = 59/106 (55%)

Query:    60 KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLN------ 113
             K   +D  K   SGGMPSSH++TV+ALA  +G+ EG  S  FAIA + A I++       
Sbjct:    31 KTGEFDFAKFFASGGMPSSHASTVTALATGVGVVEGVESTLFAIAAIFAIIVMYDASGVR 90

Query:   114 -------QIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVV 152
                    +I+ EF      +  + L EL+GHTP +VV G +LG +V
Sbjct:    91 LAVSKQAKILNEFFHGRQ-TEYKKLNELVGHTPYEVVVGALLGIIV 135

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)]

 Score = 91 (37.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query:    62 KRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILL 112
             K  D + +  +GG PS+HS++V A A AI  + G     F + VV A +++
Sbjct:    80 KNLDFRSVFQAGGFPSTHSSSVVAAATAIAFERGFADSIFGLTVVYAGLIM 130

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 37/112 (33%), Positives = 57/112 (50%)

Query:    58 WYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIV- 116
             ++ E++WD + +  SGGMPSSHSA   AL  ++ L  G     F + +  + I++   + 
Sbjct:   162 FFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIVMYDAIG 221

Query:   117 ----CEFPPD------HPLS-----SVRPLRELLGHTPLQVVAGGILGCVVA 153
                      +        L      S R L+ELLGHTP QV+AG ++G V+A
Sbjct:   222 VRRHAGMQAEVLNLIIRDLFEGHPISQRKLKELLGHTPSQVLAGALVGIVIA 273


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       124   0.00091  102 3  11 22  0.37    31
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.75u 0.13s 11.88t   Elapsed:  00:00:01
  Total cpu time:  11.75u 0.13s 11.88t   Elapsed:  00:00:01
  Start:  Sat May 11 01:48:12 2013   End:  Sat May 11 01:48:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_302580.1 annotation not avaliable (174 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	160
pfam02681	141	pfam02681, DUF212, Divergent PAP2 family	4e-55
COG1963	153	COG1963, COG1963, Uncharacterized protein conserve	6e-35
pfam01569	123	pfam01569, PAP2, PAP2 superfamily	0.001
cd03382	159	cd03382, PAP2_dolichyldiphosphatase, PAP2_like pro	0.001
cd01610	122	cd01610, PAP2_like, PAP2_like proteins, a super-fa	0.002

>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family

 Score =  169 bits (431), Expect = 4e-55
 Identities = 64/139 (46%), Positives = 87/139 (62%), Gaps = 20/139 (14%)

Query: 35  NNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE 94
           +N  L++A LA+ LAQF+K+    +KE+RWD + + ++GGMPSSHSA V+ALA  +GLQE
Sbjct: 3   SNKVLLAALLAWFLAQFIKVIIELFKERRWDFRVLFETGGMPSSHSALVTALATGVGLQE 62

Query: 95  GSGSPSFAIAVVLACI-----------------LLNQIVCEFP---PDHPLSSVRPLREL 134
           G  S  FAIA V A I                 +LNQ++ E      +H L S +PL+EL
Sbjct: 63  GFDSSLFAIAAVFALIVMYDAAGVRRAAGKQAEVLNQLIEELFEEVEEHELLSQKPLKEL 122

Query: 135 LGHTPLQVVAGGILGCVVA 153
           LGHTPL+V  G +LG V+A
Sbjct: 123 LGHTPLEVFVGALLGIVIA 141

This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141

>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown]

 Score =  119 bits (299), Expect = 6e-35
 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 17/139 (12%)

Query: 36  NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEG 95
           N PL+SA +A  LAQ +K+     + ++ +   +  +GGMPSSHSA V+ALA +I L EG
Sbjct: 10  NTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEG 69

Query: 96  SGSPSFAIAVVLACI-----------------LLNQIVCEFPPDHPLSSVRPLRELLGHT 138
             SP FAIA V A I                 +LNQ++ E   +      + L+ELLGHT
Sbjct: 70  LDSPLFAIAAVFAIIVMYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHT 129

Query: 139 PLQVVAGGILGCVVAFLMR 157
           PL+V AG +LG ++A++  
Sbjct: 130 PLEVFAGLLLGILIAWIFY 148

Length = 153

>gnl|CDD|216577 pfam01569, PAP2, PAP2 superfamily

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 39  LISAFLAFALAQFLKIFTT-----WYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ 93
           L++  LA  L   LK+           E      ++      PS H+AT  ALA+ + L 
Sbjct: 6   LLALLLALLLTVILKLLFGRPRPDVILETGPLLPQLPGYDSFPSGHAATAFALALFLALL 65

Query: 94  EGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA 153
                P     ++LA   L            LS V     L  H P  V+AG +LG +VA
Sbjct: 66  LKRRRPKLLALLLLALAALV----------GLSRVY----LGAHFPSDVLAGALLGALVA 111

Query: 154 FL 155
            L
Sbjct: 112 LL 113

This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), Glucose-6-phosphatase EC:3.1.3.9, Phosphatidylglycerophosphatase B EC:3.1.3.27 and bacterial acid phosphatase EC:3.1.3.2. The family also includes a variety of haloperoxidases that function by oxidising halides in the presence of hydrogen peroxide to form the corresponding hypohalous acids. Length = 123

>gnl|CDD|239477 cd03382, PAP2_dolichyldiphosphatase, PAP2_like proteins, dolichyldiphosphatase subfamily

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 18/88 (20%)

Query: 74  GMPSSHSATVSALAVAIGLQ-----EGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSV 128
           GMPSSHS  +   AV + L          S      + L  +LL  +V            
Sbjct: 82  GMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALLVSY---------- 131

Query: 129 RPLRELLG-HTPLQVVAGGILGCVVAFL 155
              R  LG HT  QVV G I+G ++  L
Sbjct: 132 --SRVYLGYHTVSQVVVGAIVGILLGIL 157

Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions. Length = 159

>gnl|CDD|238813 cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 21/125 (16%)

Query: 39  LISAFLAFALAQFLKI--------FTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAI 90
           L++      L   LK         F                    PS H+A   ALA+ +
Sbjct: 9   LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFL 68

Query: 91  GLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGC 150
            L          + + L  +LL  +V        LS V     L  H P  V+AG +LG 
Sbjct: 69  ALL--LPRRLLRLLLGLLLLLLALLVG-------LSRVY----LGVHYPSDVLAGALLGI 115

Query: 151 VVAFL 155
           +VA L
Sbjct: 116 LVALL 120

Several members of this superfamily have been predicted to be transmembrane proteins. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PF02681	141	DUF212: Divergent PAP2 family; InterPro: IPR003832	100.0
COG1963	153	Uncharacterized protein conserved in bacteria [Fun	100.0
cd03383	109	PAP2_diacylglycerolkinase PAP2_like proteins, diac	99.58
cd03394	106	PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-	99.52
PRK09597	190	lipid A 1-phosphatase; Reviewed	99.38
cd03388	151	PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho	99.38
cd03385	144	PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa	99.36
cd03391	159	PAP2_containing_2_like PAP2, subfamily similar to	99.36
cd03393	125	PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-	99.35
cd03382	159	PAP2_dolichyldiphosphatase PAP2_like proteins, dol	99.34
cd03395	177	PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-	99.3
cd03392	182	PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-	99.26
cd03384	150	PAP2_wunen PAP2, wunen subfamily. Most likely a fa	99.23
cd03389	186	PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip	99.18
cd03390	193	PAP2_containing_1_like PAP2, subfamily similar to	99.18
PLN02525	352	phosphatidic acid phosphatase family protein	99.17
PF01569	129	PAP2: PAP2 superfamily This family includes the fo	99.16
cd01610	122	PAP2_like PAP2_like proteins, a super-family of hi	99.11
smart00014	116	acidPPc Acid phosphatase homologues.	99.07
PRK11837	202	undecaprenyl pyrophosphate phosphatase; Provisiona	99.05
PRK10699	244	phosphatidylglycerophosphatase B; Provisional	99.01
KOG3146	228	consensus Dolichyl pyrophosphate phosphatase and r	99.01
cd03381	235	PAP2_glucose_6_phosphatase PAP2_like proteins, glu	98.97
cd03396	197	PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-	98.94
PLN02731	333	Putative lipid phosphate phosphatase	98.92
PLN02250	314	lipid phosphate phosphatase	98.9
cd03380	209	PAP2_like_1 PAP2_like_1 proteins, a sub-family of	98.9
COG0671	232	PgpB Membrane-associated phospholipid phosphatase	98.87
PLN02715	327	lipid phosphate phosphatase	98.84
cd03397	232	PAP2_acid_phosphatase PAP2, bacterial acid phospha	98.77
cd03398	232	PAP2_haloperoxidase PAP2, haloperoxidase_like subf	98.51
KOG2822	407	consensus Sphingoid base-phosphate phosphatase [Li	98.26
KOG3030	317	consensus Lipid phosphate phosphatase and related	98.17
cd03386	186	PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa	98.15
KOG4268	189	consensus Uncharacterized conserved protein contai	97.69
PF14378	191	PAP2_3: PAP2 superfamily	96.36
PF14360	74	PAP2_C: PAP2 superfamily C-terminal	85.86
COG4129	332	Predicted membrane protein [Function unknown]	85.4

>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised

Probab=100.00  E-value=1.6e-47  Score=299.92  Aligned_cols=121  Identities=57%  Similarity=0.899  Sum_probs=113.9

Q ss_pred             ccchhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH--
Q 031423           33 FPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI--  110 (160)
Q Consensus        33 l~~N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I--  110 (160)
                      |++|++|+++++||++||++|++++++++|+|||++++++|||||||||+|+||||++|+.+|++||+|+++++||+|  
T Consensus         1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm   80 (141)
T PF02681_consen    1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM   80 (141)
T ss_pred             CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence            578999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             ---------------HHHHHhhcCCCCC---CCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423          111 ---------------LLNQIVCEFPPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA  153 (160)
Q Consensus       111 ---------------vln~l~~~~~~~~---~~~~~~~LkE~lGHtp~EVl~GallGivia  153 (160)
                                     ++|++++++.+.+   +..++++|||.+||||.||++|+++|+++|
T Consensus        81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA  141 (141)
T PF02681_consen   81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA  141 (141)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence                           8899999987655   334557999999999999999999999985

>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=7.6e-45  Score=285.90  Aligned_cols=127  Identities=43%  Similarity=0.665  Sum_probs=118.9

Q ss_pred             cccchhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-
Q 031423           32 FFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI-  110 (160)
Q Consensus        32 ~l~~N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I-  110 (160)
                      -+++|.+|+++++||+.||++|++++.+|+||+||+.++++|||||||||+|+||+|++|+.+|++||+|++|++||+| 
T Consensus         6 ~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vfaiIv   85 (153)
T COG1963           6 EIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVFAIIV   85 (153)
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             ----------------HHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHHHhhcc
Q 031423          111 ----------------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       111 ----------------vln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~~~  158 (160)
                                      ++|++++++.++.+..+.++|||.+||||.||++|.++||++++++|.
T Consensus        86 m~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~  149 (153)
T COG1963          86 MYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYA  149 (153)
T ss_pred             hhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence                            889999998766554455679999999999999999999999998763

>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family

Probab=99.58  E-value=1.9e-14  Score=107.99  Aligned_cols=96  Identities=28%  Similarity=0.444  Sum_probs=74.2

Q ss_pred             hhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423           36 NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI  115 (160)
Q Consensus        36 N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l  115 (160)
                      |..+.+-+++..+.+++|.++++-||.         .+||||+|++..+++++.+.+... +..+..+..+++.++..+ 
T Consensus        11 ~~~~~~~~~~~~i~~~lK~~~~r~RP~---------~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~lv~~S-   79 (109)
T cd03383          11 HVTFVSLLIVIIVVVILKAYFGRGTPL---------EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVMVAHS-   79 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCC---------CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH-
Confidence            344677778889999999998766653         258999999999999998887542 222334455666666655 


Q ss_pred             hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                                      |-++| |+|.||++|+++|++++.++++
T Consensus        80 ----------------Rvylg~H~psDVlaG~~lG~~~~~~~~~  107 (109)
T cd03383          80 ----------------RVEMKIHTMWEVVVGAILGALITLLIFK  107 (109)
T ss_pred             ----------------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                            77889 9999999999999999987653

In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.

>cd03394 PAP2_like_5 PAP2_like_5 proteins

Probab=99.52  E-value=1.5e-13  Score=100.60  Aligned_cols=98  Identities=23%  Similarity=0.183  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhh
Q 031423           38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVC  117 (160)
Q Consensus        38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~  117 (160)
                      .+.+.+++..+.+.+|..+++-||...+    -...+|||+|++..+++++.+....+.. ..-...++++..+...   
T Consensus         8 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~----~~~~sfPSgHa~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~s---   79 (106)
T cd03394           8 LAEAAALTAAVTEGLKFAVGRARPDGSN----NGYRSFPSGHTASAFAAATFLQYRYGWR-WYGIPAYALASLVGAS---   79 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCccCcHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHH---
Confidence            4567778888899999999887775544    3466999999999999999988877632 2222234444444444   


Q ss_pred             cCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423          118 EFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus       118 ~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~  157 (160)
                                    |.++| |+|.||++|.++|.+++++++
T Consensus        80 --------------Rv~~g~H~~sDV~~G~~lG~~~~~~~~  106 (106)
T cd03394          80 --------------RVVANRHWLSDVLAGAAIGILVGYLVT  106 (106)
T ss_pred             --------------HHhcCCcCHHHHHHHHHHHHHheeeeC
Confidence                          77888 999999999999999987654

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>PRK09597 lipid A 1-phosphatase; Reviewed

Probab=99.38  E-value=4.6e-12  Score=104.01  Aligned_cols=102  Identities=18%  Similarity=0.075  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhccccch-hhhh-ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423           38 PLISAFLAFALAQFLKIFTTWYKEKRWDS-KKML-DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI  115 (160)
Q Consensus        38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~-~~l~-~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l  115 (160)
                      .+.+.+.+..+.+.+|..+++.+....++ .+.- .+-+|||+||+++++.++.+...++...  ..+.+.+++++..+ 
T Consensus        82 l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~--~~~~l~lallVg~S-  158 (190)
T PRK09597         82 VANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKK--YWWLLPLIPLTMLA-  158 (190)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhH--HHHHHHHHHHHHHH-
Confidence            35566777778899999999754422222 1111 1359999999999988877666555443  23334455555555 


Q ss_pred             hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                                      |.++| |+|.||++|+++|+++++++..
T Consensus       159 ----------------RVYLGvHyPsDVLaG~liGil~~~lf~~  186 (190)
T PRK09597        159 ----------------RIYLDMHTIGAVLAGLGVGMLCVSLFTS  186 (190)
T ss_pred             ----------------HHHhCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                            78899 9999999999999999988764

>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily

Probab=99.38  E-value=5.4e-12  Score=97.71  Aligned_cols=101  Identities=19%  Similarity=0.349  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhccccc-hhhhh---c-cCCCCchHHHHHHHHHHHHHHHh--CCCch---HHHHHHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRWD-SKKML---D-SGGMPSSHSATVSALAVAIGLQE--GSGSP---SFAIAVVLA  108 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d-~~~l~---~-sGGMPSSHSA~V~aLat~igl~~--G~~s~---~Faia~v~A  108 (160)
                      +.+..++..+.+++|..+++-||.... .....   . .-||||+|++..+++++.+.+..  ....+   ...++++++
T Consensus        39 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  118 (151)
T cd03388          39 VVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALFYS  118 (151)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence            445566777889999999988875322 11111   2 33999999999999999888752  21111   223345555


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      +.+..+                 |-++| |+|.||++|+++|++++.+.
T Consensus       119 ~~v~~S-----------------RvylgvH~p~DVl~G~~lG~~~~~~~  150 (151)
T cd03388         119 TLVCLS-----------------RIYMGMHSVLDVIAGSLIGVLILLFR  150 (151)
T ss_pred             HHHHHH-----------------HHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence            555555                 78999 99999999999999988653

Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.

>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily

Probab=99.36  E-value=7.3e-12  Score=95.98  Aligned_cols=101  Identities=19%  Similarity=0.283  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhccccc-hhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRWD-SKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQ  114 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d-~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~  114 (160)
                      +.+.+++..+.+++|...++-||-..+ .....   ..-+|||+|+++.+++++.+.....  .....+.++++.++.-+
T Consensus        39 ~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~~S  116 (144)
T cd03385          39 TIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVAWS  116 (144)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHH
Confidence            334445666778888777766652111 11111   2359999999999998877654332  12334456666666555


Q ss_pred             HhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          115 IVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       115 l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                                       |-++| |+|.||++|+++|++.+++.+|
T Consensus       117 -----------------Rvylg~H~~sDVl~G~~lg~~~~~~~~~  144 (144)
T cd03385         117 -----------------RIYLGVHYPLDMLGAALVAVLSALLVFQ  144 (144)
T ss_pred             -----------------HHHhCCccHHHHHHHHHHHHHHHHHHhC
Confidence                             77899 9999999999999999998875

Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.

>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2

Probab=99.36  E-value=4.8e-12  Score=99.61  Aligned_cols=100  Identities=23%  Similarity=0.277  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhccccch--hhhhc--cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423           40 ISAFLAFALAQFLKIFTTWYKEKRWDS--KKMLD--SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI  115 (160)
Q Consensus        40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~--~~l~~--sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l  115 (160)
                      .+.+++..+.+++|..+.+-||...+.  ....+  .-+|||+|++..+++++.+.+....+..+..+.+.+|..+..+ 
T Consensus        54 ~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~S-  132 (159)
T cd03391          54 LGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGIS-  132 (159)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            334455567789999998888743322  11222  3499999999999999988876543223444455566665555 


Q ss_pred             hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                                      |.++| |.|.||++|+++|++.+++.
T Consensus       133 ----------------Rvylg~H~psDVlaG~~lG~~~~~~~  158 (159)
T cd03391         133 ----------------RVLLGRHHVLDVLAGAFLGYLEALLV  158 (159)
T ss_pred             ----------------HHHhCCcCHHHHHHHHHHHHHHHHhC
Confidence                            77888 99999999999999998764

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.

>cd03393 PAP2_like_3 PAP2_like_3 proteins

Probab=99.35  E-value=1.1e-11  Score=92.91  Aligned_cols=100  Identities=25%  Similarity=0.282  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhccccchhh-hh----ccCCCCchHHHHHHHHHHHHHHHhCCCchHH-HHHHHHHHHH
Q 031423           38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKK-ML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSF-AIAVVLACIL  111 (160)
Q Consensus        38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-l~----~sGGMPSSHSA~V~aLat~igl~~G~~s~~F-aia~v~A~Iv  111 (160)
                      .+.+..++..+.+++|..+++-||...+... +.    ...+|||+|+++.+++++.+.....  .+.+ .+...++..+
T Consensus        18 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v   95 (125)
T cd03393          18 LGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHVR--KKWFTLIGVVLVVLI   95 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            5667778888899999999877774333211 11    2459999999999888777766542  2222 2333344444


Q ss_pred             HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      .-+                 |-++| |.|.||++|+++|+.+++++
T Consensus        96 ~~s-----------------Rv~lg~H~~sDVl~G~~lG~~~~~~~  124 (125)
T cd03393          96 SFS-----------------RLYLGVHWPSDVIGGVLIGLLVLVLG  124 (125)
T ss_pred             HHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHh
Confidence            444                 77889 99999999999999999875

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily

Probab=99.34  E-value=8.9e-12  Score=97.82  Aligned_cols=99  Identities=29%  Similarity=0.221  Sum_probs=64.8

Q ss_pred             HHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHH--hCCCch--------HHHHHHHHHHH
Q 031423           41 SAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ--EGSGSP--------SFAIAVVLACI  110 (160)
Q Consensus        41 sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~--~G~~s~--------~Faia~v~A~I  110 (160)
                      +.+.+..+.+++|.++++-||-..+.. --...||||+|++.++++++.+.+.  ...+.+        ...+..+++..
T Consensus        50 ~~~~~~~~~~~lK~~~~rpRP~~~~~~-~~~~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (159)
T cd03382          50 GLLANEALNYVLKRIIKEPRPCSGAYF-VRSGYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALL  128 (159)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcCCCCcC-CCCCCCCCchhHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHH
Confidence            344556667788888876665322211 1134499999999988877776653  222221        12223444555


Q ss_pred             HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423          111 LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus       111 vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~  157 (160)
                      +..+                 |-++| |+|.||++|.++|++++++++
T Consensus       129 v~~S-----------------Rvylg~H~~~DVl~G~~lG~~~~~~~~  159 (159)
T cd03382         129 VSYS-----------------RVYLGYHTVSQVVVGAIVGILLGILWF  159 (159)
T ss_pred             HHHH-----------------HHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence            5554                 77899 999999999999999998764

Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.

>cd03395 PAP2_like_4 PAP2_like_4 proteins

Probab=99.30  E-value=2.3e-11  Score=95.99  Aligned_cols=96  Identities=28%  Similarity=0.330  Sum_probs=68.9

Q ss_pred             HHHHHHHhHHHHHHHhhhcccc-chhhh---hc---cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423           43 FLAFALAQFLKIFTTWYKEKRW-DSKKM---LD---SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI  115 (160)
Q Consensus        43 ~~aw~vAQ~iK~~i~~~~~~~~-d~~~l---~~---sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l  115 (160)
                      +.+..+.+.+|..+++-||... ...+.   ..   .-+|||+|++..+++++.+.+...-. ....+.+++++.+.-+ 
T Consensus        67 ~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~S-  144 (177)
T cd03395          67 FADQLASGFLKPLVARLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALLVGYS-  144 (177)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence            3445677899999988887432 22111   21   23999999999999999988753211 2344556666666655 


Q ss_pred             hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                                      |-++| |+|.||++|+++|+.++.+.
T Consensus       145 ----------------RvylG~H~psDVl~G~~lG~~~~~~~  170 (177)
T cd03395         145 ----------------RVYVGVHYPGDVIAGALIGIISGLLF  170 (177)
T ss_pred             ----------------HHHhCCcCHHHHHHHHHHHHHHHHHH
Confidence                            78999 99999999999999998754

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03392 PAP2_like_2 PAP2_like_2 proteins

Probab=99.26  E-value=6.1e-11  Score=93.27  Aligned_cols=100  Identities=22%  Similarity=0.201  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHH--hCCCc-----hHHHHHHHHHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ--EGSGS-----PSFAIAVVLACIL  111 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~--~G~~s-----~~Faia~v~A~Iv  111 (160)
                      +.+.+.+..+.|++|..+++-||...+.. --...+|||+|++..++++..+.+.  .....     ...++++.++..+
T Consensus        68 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v  146 (182)
T cd03392          68 LLALLGGGALNTLLKLLVQRPRPPLHLLV-PEGGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLV  146 (182)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHH
Confidence            34456677888999999988887544321 1124499999999999998877653  22221     2223344444444


Q ss_pred             HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      .-.                 |.++| |+|.||++|.++|++++.+.
T Consensus       147 ~~s-----------------Rv~lg~H~~sDvl~G~~lG~~~~~~~  175 (182)
T cd03392         147 GLS-----------------RLYLGVHYPSDVLAGWLLGLAWLALL  175 (182)
T ss_pred             HHH-----------------HHHhcccchhHHHHHHHHHHHHHHHH
Confidence            444                 77889 99999999999999987654

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>cd03384 PAP2_wunen PAP2, wunen subfamily

Probab=99.23  E-value=7.7e-11  Score=91.85  Aligned_cols=102  Identities=24%  Similarity=0.211  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhccc-----cchh----------------------hhhccC-CCCchHHHHHHHHHHH
Q 031423           38 PLISAFLAFALAQFLKIFTTWYKEKR-----WDSK----------------------KMLDSG-GMPSSHSATVSALAVA   89 (160)
Q Consensus        38 il~sa~~aw~vAQ~iK~~i~~~~~~~-----~d~~----------------------~l~~sG-GMPSSHSA~V~aLat~   89 (160)
                      -+.+..++.++++++|..+.+.||.-     +|+.                      .+-+.+ +|||+||++.++.++.
T Consensus         9 ~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~~~~   88 (150)
T cd03384           9 FLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYAAVF   88 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHHHHH
Confidence            35566778888999999999888742     2221                      111222 9999999999998888


Q ss_pred             HHHHh--CC---CchH----H-HHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423           90 IGLQE--GS---GSPS----F-AIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus        90 igl~~--G~---~s~~----F-aia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      +.+..  .+   ..+.    . .+.+++|..+..+                 |.++| |+|.||++|+++|++++++.
T Consensus        89 l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~s-----------------Rv~~~~H~~sDviaG~~lG~~~~~~~  149 (150)
T cd03384          89 LALYLQARLKLRGSRLLRPLLQFLLLALALYVGLS-----------------RISDYKHHWSDVLAGALLGSVIALFL  149 (150)
T ss_pred             HHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHh-----------------hhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            87642  11   1111    1 1233444444444                 66778 99999999999999999764

Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.

>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily

Probab=99.18  E-value=2.5e-10  Score=91.58  Aligned_cols=99  Identities=28%  Similarity=0.314  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhccccchhh-----h----hccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 031423           40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK-----M----LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI  110 (160)
Q Consensus        40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-----l----~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I  110 (160)
                      .+...+..+.|.+|..+++-||...+...     .    -...+|||+|++..+++++.++....   ..-....+++..
T Consensus        76 ~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~---~~~~~~~~~~~l  152 (186)
T cd03389          76 ATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFP---RYRWAFILLALL  152 (186)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            34455667778999999877775321100     0    11348999999999999999987652   111222344444


Q ss_pred             HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          111 LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       111 vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      +..+                 |.++| |+|.||++|+++|++++.+.+.
T Consensus       153 v~~S-----------------Riylg~H~~sDVl~G~~lG~~~~~~~~~  184 (186)
T cd03389         153 IAFS-----------------RVIVGAHYPSDVIAGSLLGAVTALALYQ  184 (186)
T ss_pred             HHHH-----------------HHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            4444                 77888 9999999999999999987764

Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.

>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1

Probab=99.18  E-value=1.5e-10  Score=92.81  Aligned_cols=103  Identities=23%  Similarity=0.246  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcccc-----chh-----------------hhhcc--CCCCchHHHHHHHHHHHHHHHh
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK-----------------KMLDS--GGMPSSHSATVSALAVAIGLQE   94 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~-----------------~l~~s--GGMPSSHSA~V~aLat~igl~~   94 (160)
                      +.+..++.++.+++|..+.+.|+..+     +..                 .....  -+|||+|++..++.++.+++..
T Consensus        52 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l  131 (193)
T cd03390          52 LLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYL  131 (193)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence            45556677889999999998888532     110                 01122  3899999999999998888632


Q ss_pred             --CCC-----chH-----HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423           95 --GSG-----SPS-----FAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus        95 --G~~-----s~~-----Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                        ...     .+.     ..+.+++|+.+..+                 |.++| |.|.||++|+++|++++++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~S-----------------Ri~~g~H~~sDVlaG~~lG~~~a~~~~~  191 (193)
T cd03390         132 AGKLHIFDPRGSSWRLLLALLPLLLAILVAVS-----------------RTRDYRHHFSDVIAGSLIGLIIAYLSYR  191 (193)
T ss_pred             HHHhhcccccchHHHHHHHHHHHHHHHHHHHH-----------------HHhccccCHHHHHHHHHHHHHHHHheeE
Confidence              111     011     12334455555544                 67788 9999999999999999998764

Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.

>PLN02525 phosphatidic acid phosphatase family protein

Probab=99.17  E-value=1.7e-10  Score=102.01  Aligned_cols=99  Identities=18%  Similarity=0.211  Sum_probs=68.8

Q ss_pred             HHHHHHHHHhHHHHHHHhhhccccchhhhh--------cc-CCCCchHHHHHHHHHHHHHHHh-C---CCch-H----HH
Q 031423           41 SAFLAFALAQFLKIFTTWYKEKRWDSKKML--------DS-GGMPSSHSATVSALAVAIGLQE-G---SGSP-S----FA  102 (160)
Q Consensus        41 sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~--------~s-GGMPSSHSA~V~aLat~igl~~-G---~~s~-~----Fa  102 (160)
                      ....+..+.|.+|-.+.+-|+......++.        .. -||||+||++.++++..+.... .   ..++ .    .+
T Consensus        43 ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~  122 (352)
T PLN02525         43 LMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLA  122 (352)
T ss_pred             HHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence            345566778999999998888643333321        12 2999999999999998776541 1   1111 1    23


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          103 IAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       103 ia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      +++++++.+...                 |-|+| |+|.||++|+++|++++.+.
T Consensus       123 l~~l~allV~~S-----------------RlYLGvH~psDVl~G~~lG~~i~~~~  160 (352)
T PLN02525        123 LFCLLVALVGFG-----------------RLYLGMHSPIDIIAGLAIGLVILAFW  160 (352)
T ss_pred             HHHHHHHHHHHH-----------------HHheeccCHHHHHHHHHHHHHHHHHH
Confidence            344555555555                 88999 99999999999999998754

>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3

Probab=99.16  E-value=2.5e-10  Score=83.05  Aligned_cols=103  Identities=29%  Similarity=0.356  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhccccchhh-hh----c----cCCCCchHHHHHHHHHHHHHHHhCCCchH----HHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK-ML----D----SGGMPSSHSATVSALAVAIGLQEGSGSPS----FAIAV  105 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-l~----~----sGGMPSSHSA~V~aLat~igl~~G~~s~~----Faia~  105 (160)
                      +.+.+.+..+.+++|..+++.||....... ..    .    .++|||+|++..++.++.+....+.....    .....
T Consensus         6 ~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   85 (129)
T PF01569_consen    6 LFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFLLAI   85 (129)
T ss_dssp             HHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHHHHH
T ss_pred             ccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccccccchhhHHHH
Confidence            445556666678889999876653222111 11    1    35999999999999999998887655443    23344


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          106 VLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       106 v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      .++.++...                 |.++| |++.||++|.++|..++.+++.
T Consensus        86 ~~~~~v~~s-----------------rv~~g~H~~~Dvi~G~~lg~~~~~~~~~  122 (129)
T PF01569_consen   86 VLAFLVALS-----------------RVYLGAHFFSDVIAGILLGILIAYLFYR  122 (129)
T ss_dssp             HHHHHHHHH-----------------HHHTTSS-HHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHhhcC-----------------EEEcCeEehHHHHHHHHHHHHHHHHHHH
Confidence            444443333                 66778 9999999999999999987654

1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....

>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies

Probab=99.11  E-value=9e-10  Score=78.19  Aligned_cols=100  Identities=26%  Similarity=0.255  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHhHHHHHHHhhhccccchhh--------hhccCCCCchHHHHHHHHHHHHHHHhCCCc---hHHHHHHHHH
Q 031423           40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK--------MLDSGGMPSSHSATVSALAVAIGLQEGSGS---PSFAIAVVLA  108 (160)
Q Consensus        40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~--------l~~sGGMPSSHSA~V~aLat~igl~~G~~s---~~Faia~v~A  108 (160)
                      .....+..+.+.+|.+..+-|+...+...        --...+|||+|++..+++++.+....+-..   ....+...++
T Consensus        10 ~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   89 (122)
T cd01610          10 LALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRLLRLLLGLLLLLLA   89 (122)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455789999997766654322211        112459999999999999999998775321   2333344444


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      ..+...                 |-++| |+|.||++|.++|.+++.++
T Consensus        90 ~~~~~s-----------------ri~~g~H~~~Dv~~G~~lg~~~~~~~  121 (122)
T cd01610          90 LLVGLS-----------------RVYLGVHYPSDVLAGALLGILVALLV  121 (122)
T ss_pred             HHHHHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHH
Confidence            444444                 55677 99999999999999998764

Several members of this superfamily have been predicted to be transmembrane proteins.

>smart00014 acidPPc Acid phosphatase homologues

Probab=99.07  E-value=1.9e-09  Score=78.89  Aligned_cols=98  Identities=24%  Similarity=0.283  Sum_probs=68.5

Q ss_pred             HHHHHHHHhHHHHHHHhhhccccc---------hhhhh-ccCCCCchHHHHHHHHHHHHHHHhC--C-CchHHHHHHHHH
Q 031423           42 AFLAFALAQFLKIFTTWYKEKRWD---------SKKML-DSGGMPSSHSATVSALAVAIGLQEG--S-GSPSFAIAVVLA  108 (160)
Q Consensus        42 a~~aw~vAQ~iK~~i~~~~~~~~d---------~~~l~-~sGGMPSSHSA~V~aLat~igl~~G--~-~s~~Faia~v~A  108 (160)
                      ...+.++.+++|..+++-|+..++         ....- ...++||+|+++.++.++.+.....  + +.....+...++
T Consensus         4 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   83 (116)
T smart00014        4 AVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAARKLLIILLLLLA   83 (116)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            456778889999999988885432         11111 2459999999999999998887532  1 111222334444


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                      ..+...                 |.++| |.|.||++|.++|.+++.+.
T Consensus        84 ~~~~~s-----------------Ri~~g~H~~~Dv~~G~~lG~~v~~~~  115 (116)
T smart00014       84 LVVGFS-----------------RVYLGAHWPSDVLAGSLLGILIAAVL  115 (116)
T ss_pred             HHHHHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHc
Confidence            444444                 77888 99999999999999998753

>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional

Probab=99.05  E-value=1.8e-09  Score=88.32  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcccc-chhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRW-DSKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQ  114 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-d~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~  114 (160)
                      +.+.+++..+.+++|.++++-||-.. +.....   ....+||+|++.+++.++.+-+...  .....+.+++|+++.-+
T Consensus        65 ~~~~~~~~~~~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~S  142 (202)
T PRK11837         65 AIALAISLLVSWTIGHLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAWS  142 (202)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence            34556777788999999987776211 111111   2459999999998887665433221  12333445566666655


Q ss_pred             HhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          115 IVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       115 l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                                       |.++| |.|.||++|+++|++++.+.
T Consensus       143 -----------------RVylGvHypsDVlgG~~lG~~~~~~~  168 (202)
T PRK11837        143 -----------------RVYLGVHWPLDMLGALLVGMIGCLSA  168 (202)
T ss_pred             -----------------HHHhcCccHHHHHHHHHHHHHHHHHH
Confidence                             88999 99999999999999998753

>PRK10699 phosphatidylglycerophosphatase B; Provisional

Probab=99.01  E-value=1.9e-09  Score=91.41  Aligned_cols=66  Identities=23%  Similarity=0.370  Sum_probs=47.4

Q ss_pred             CCCchHHHHHHHHHHHH-HHH-hCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHH
Q 031423           74 GMPSSHSATVSALAVAI-GLQ-EGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGC  150 (160)
Q Consensus        74 GMPSSHSA~V~aLat~i-gl~-~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGi  150 (160)
                      ||||+|+++.++++... ++. .......+.+.+++|..+..+                 |.++| |+|.||++|.++|.
T Consensus       158 SFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~S-----------------RvyLGvH~psDVlaG~llG~  220 (244)
T PRK10699        158 AFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMGS-----------------RLLLGMHWPRDLVVATLISW  220 (244)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHccCcCHHHHHHHHHHHH
Confidence            99999999987755432 322 221223344556677777666                 88999 99999999999999


Q ss_pred             HHHHhh
Q 031423          151 VVAFLM  156 (160)
Q Consensus       151 via~i~  156 (160)
                      +++.+.
T Consensus       221 ~~~~l~  226 (244)
T PRK10699        221 LLVTVA  226 (244)
T ss_pred             HHHHHH
Confidence            887654

>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]

Probab=99.01  E-value=1.9e-09  Score=90.28  Aligned_cols=75  Identities=36%  Similarity=0.415  Sum_probs=51.7

Q ss_pred             ccC-CCCchHHHHHHHHHHHHHH--HhCCCchHHHHHH-HHHHH--HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHH
Q 031423           71 DSG-GMPSSHSATVSALAVAIGL--QEGSGSPSFAIAV-VLACI--LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVV  143 (160)
Q Consensus        71 ~sG-GMPSSHSA~V~aLat~igl--~~G~~s~~Faia~-v~A~I--vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl  143 (160)
                      ++| |||||||..+.-.++...+  +++++...|..-. ++..+  .+-..+            ..+|.+++ ||..||+
T Consensus        92 ~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v------------~~sRVyl~yHt~sQVv  159 (228)
T KOG3146|consen   92 RSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYV------------CYSRVYLKYHTLSQVV  159 (228)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH------------HHHHHHHHhccHHHHH
Confidence            455 9999999999888887666  4566665555432 33222  111111            13488888 9999999


Q ss_pred             HHHHHHHHHHHhhc
Q 031423          144 AGGILGCVVAFLMR  157 (160)
Q Consensus       144 ~GallGivia~i~~  157 (160)
                      +|+++|.+++.+++
T Consensus       160 ~G~ivG~l~g~~Wf  173 (228)
T KOG3146|consen  160 VGAIVGGLVGILWF  173 (228)
T ss_pred             HHHHhhhhHHHHHH
Confidence            99999999997654

>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily

Probab=98.97  E-value=4e-09  Score=88.80  Aligned_cols=102  Identities=24%  Similarity=0.241  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhccccch--h-------------hhh-ccC-CCCchHHHHHHHHHHHHHHH------hC
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRWDS--K-------------KML-DSG-GMPSSHSATVSALAVAIGLQ------EG   95 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~--~-------------~l~-~sG-GMPSSHSA~V~aLat~igl~------~G   95 (160)
                      +.+..++..+-+++|.++.+-||.-|.-  .             .+. ++| ||||+|+...+++...+...      ..
T Consensus        21 ~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~l~~~~~~r  100 (235)
T cd03381          21 LWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTALLSHLAGR  100 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3444445447899999998777642210  0             011 234 99999999888877665542      11


Q ss_pred             CCchH-----HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423           96 SGSPS-----FAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus        96 ~~s~~-----Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~  157 (160)
                      .....     ..+...+++.+..+                 |-++| |+|.||++|.++|++++.++.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~V~~S-----------------RvYLgvHfpsDVlaG~~lGi~~~~~~~  151 (235)
T cd03381         101 KRSRFLRVMLWLVFWGVQLAVCLS-----------------RIYLAAHFPHQVIAGVISGIAVAETFS  151 (235)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHH-----------------HHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            11111     11112222223333                 78999 999999999999999987543

Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.

>cd03396 PAP2_like_6 PAP2_like_6 proteins

Probab=98.94  E-value=7.1e-09  Score=83.44  Aligned_cols=104  Identities=17%  Similarity=0.118  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHhHHHHHHHhhhccccch-------hhh-----h---ccCCCCchHHHHHHHHHHHHHHHhCCCc----
Q 031423           38 PLISAFLAFALAQFLKIFTTWYKEKRWDS-------KKM-----L---DSGGMPSSHSATVSALAVAIGLQEGSGS----   98 (160)
Q Consensus        38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~-------~~l-----~---~sGGMPSSHSA~V~aLat~igl~~G~~s----   98 (160)
                      .+++..++..+.+++|..+++-||...+-       ...     .   ....+||+|++..++++....+......    
T Consensus        72 ~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~~~~~~~~~~~  151 (197)
T cd03396          72 LILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFLFRRRRPRLAR  151 (197)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHHHHHhcchHHH
Confidence            34445555566788999988877754321       000     1   1339999999999998654443332222    


Q ss_pred             hHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423           99 PSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus        99 ~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      ....++++++.++...                 |.+.| |.|+||++|+++|.+++++.|.
T Consensus       152 ~~~~~~~~~~~~vg~s-----------------Ri~~G~Hf~SDvl~g~~ig~~~~~~~~~  195 (197)
T cd03396         152 LVLAAGLALGALMGLA-----------------RMARGAHFLSDVLWSLLLVWLIALLLYR  195 (197)
T ss_pred             HHHHHHHHHHHHHHHH-----------------HHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            2223344555554444                 66788 9999999999999999988764

PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.

>PLN02731 Putative lipid phosphate phosphatase

Probab=98.92  E-value=8.1e-09  Score=91.03  Aligned_cols=103  Identities=20%  Similarity=0.221  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcccc-----chhh---------------hhccC--CCCchHHHHHHHHHHHHHHHh-C
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSKK---------------MLDSG--GMPSSHSATVSALAVAIGLQE-G   95 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~~---------------l~~sG--GMPSSHSA~V~aLat~igl~~-G   95 (160)
                      +.+..++.++.+++|..+.+.|+.-+     |...               .+..|  +|||+||+..++..+.+++.. |
T Consensus       123 l~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~~  202 (333)
T PLN02731        123 LYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSG  202 (333)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            44556777888999999988877421     1110               12233  999999999999999988743 2


Q ss_pred             C----C---c--h--HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423           96 S----G---S--P--SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus        96 ~----~---s--~--~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      .    +   .  .  ...+.+++|+.+.-+                 |.+.+ |.|.||++|+++|+++|++.|.
T Consensus       203 kl~~~~~~~~~~rl~l~~lpll~A~lIalS-----------------RV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~  260 (333)
T PLN02731        203 KIQAFDGKGHVAKLCIVILPLLFAALVGIS-----------------RVDDYWHHWQDVFAGGLLGLAISTICYL  260 (333)
T ss_pred             hhhhhcccchhHHHHHHHHHHHHHHHHHHH-----------------HHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1    0   0  1  112234455555555                 33445 9999999999999999987664

>PLN02250 lipid phosphate phosphatase

Probab=98.90  E-value=8.3e-09  Score=90.17  Aligned_cols=103  Identities=20%  Similarity=0.186  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcccc-----chh----------------hhhccC--CCCchHHHHHHHHHHHHHHHh-
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK----------------KMLDSG--GMPSSHSATVSALAVAIGLQE-   94 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~----------------~l~~sG--GMPSSHSA~V~aLat~igl~~-   94 (160)
                      +.+..++.++++++|..+.+.|+.-+     |..                ..+..|  .|||+||+..++..+.+++.. 
T Consensus       104 l~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLslyL~  183 (314)
T PLN02250        104 LFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLYLS  183 (314)
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence            44556677888999999998887422     111                112223  999999999999999888742 


Q ss_pred             C----CC---c--h--HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423           95 G----SG---S--P--SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus        95 G----~~---s--~--~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      +    ++   .  .  ...+.+++|..+.-+                 |.+.+ |.|.||++|+++|++++++.|.
T Consensus       184 ~kl~~~~~~~~~~r~~l~~lpll~A~lVa~S-----------------RI~dy~Hh~sDVlaG~lIG~~~A~~~y~  242 (314)
T PLN02250        184 GKIRVFDRRGHVAKLCIVFLPLLVAALVGVS-----------------RVDDYWHHWQDVFAGALIGLTVASFCYL  242 (314)
T ss_pred             HhhccccccchhHHHHHHHHHHHHHHHHHHH-----------------HHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            2    11   1  1  112234445555544                 44555 9999999999999999987654

>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases

Probab=98.90  E-value=1.8e-08  Score=81.53  Aligned_cols=90  Identities=22%  Similarity=0.077  Sum_probs=65.9

Q ss_pred             HHHhHHHHHHHhhhccccc---hhhhh-------ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 031423           47 ALAQFLKIFTTWYKEKRWD---SKKML-------DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIV  116 (160)
Q Consensus        47 ~vAQ~iK~~i~~~~~~~~d---~~~l~-------~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~  116 (160)
                      .++..+|...++.|+-..+   |..+.       ..+++||+|++..+++++.+....+-.   +.....++..+..+  
T Consensus       107 ~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~~~~S--  181 (209)
T cd03380         107 IATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPER---AAELLARAAEAGNS--  181 (209)
T ss_pred             HHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH--
Confidence            4468899999999986554   43332       367999999999999999999876521   22222333333333  


Q ss_pred             hcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          117 CEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       117 ~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                                     |.+.| |+|.+|++|..+|..++-.+
T Consensus       182 ---------------Rv~~G~H~~sDv~aG~~lG~~i~~~~  207 (209)
T cd03380         182 ---------------RVVAGVHWPSDVEAGRILGEAIAAAL  207 (209)
T ss_pred             ---------------hhhCCeecHHHHHHHHHHHHHHHHHH
Confidence                           78999 99999999999999997544

>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]

Probab=98.87  E-value=1.4e-08  Score=77.32  Aligned_cols=68  Identities=29%  Similarity=0.463  Sum_probs=51.0

Q ss_pred             cCCCCchHHHHHHHHHHHHHHHhCCCch------HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHH
Q 031423           72 SGGMPSSHSATVSALAVAIGLQEGSGSP------SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVA  144 (160)
Q Consensus        72 sGGMPSSHSA~V~aLat~igl~~G~~s~------~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~  144 (160)
                      ..+|||+|++..++.+..+++.......      ...+..+++..+..+                 |.++| |+|.||++
T Consensus       133 ~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S-----------------Rv~lGvH~~~DVi~  195 (232)
T COG0671         133 GYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS-----------------RVYLGVHYPSDVIG  195 (232)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-----------------HHhcccccchHHHh
Confidence            4489999999999998888886542221      124445555555555                 78899 99999999


Q ss_pred             HHHHHHHHHHhh
Q 031423          145 GGILGCVVAFLM  156 (160)
Q Consensus       145 GallGivia~i~  156 (160)
                      |.++|++++.+.
T Consensus       196 G~~~g~~~~~~~  207 (232)
T COG0671         196 GALLGALAALLL  207 (232)
T ss_pred             hHHHHHHHHHHH
Confidence            999999998654

>PLN02715 lipid phosphate phosphatase

Probab=98.84  E-value=1.8e-08  Score=88.66  Aligned_cols=103  Identities=21%  Similarity=0.235  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcc-----ccchhh---------------hhccC--CCCchHHHHHHHHHHHHHHHh-C
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK---------------MLDSG--GMPSSHSATVSALAVAIGLQE-G   95 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~-----~~d~~~---------------l~~sG--GMPSSHSA~V~aLat~igl~~-G   95 (160)
                      +.+.+++.++++++|..+.+.|+.     ++|...               .+..|  .+||+||+++++.++.+++.. +
T Consensus       129 ~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~~  208 (327)
T PLN02715        129 LFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSG  208 (327)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            445667778889999999888874     122111               12233  899999999999999988742 2


Q ss_pred             C----Cc--h-----HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423           96 S----GS--P-----SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus        96 ~----~s--~-----~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                      .    +.  .     +..+.+++|+.+.-+                 |.+.+ |.|.||++|+++|++++++.|.
T Consensus       209 kl~~~~~~~~~~k~~l~~lpll~A~lIalS-----------------Rv~Dy~Hh~sDVlaG~lLG~~~a~~~y~  266 (327)
T PLN02715        209 KIKAFNGEGHVAKLCLVIFPLLAACLVGIS-----------------RVDDYWHHWQDVFAGALIGILVAAFCYR  266 (327)
T ss_pred             hhccccccchHHHHHHHHHHHHHHHHHHHH-----------------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1    10  0     112234445545544                 33445 9999999999999999987664

>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases

Probab=98.77  E-value=5.5e-08  Score=80.98  Aligned_cols=91  Identities=16%  Similarity=0.156  Sum_probs=64.3

Q ss_pred             HhHHHHHHHhhhccccchhh---------hhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcC
Q 031423           49 AQFLKIFTTWYKEKRWDSKK---------MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF  119 (160)
Q Consensus        49 AQ~iK~~i~~~~~~~~d~~~---------l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~  119 (160)
                      .+..|...++.|+-..+...         .-..+++||+|++..++.++.++...+-.   ....+.++..+.++     
T Consensus       117 ~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~---~~~l~~~a~~~g~S-----  188 (232)
T cd03397         117 TYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPER---ADEILARGSEYGQS-----  188 (232)
T ss_pred             HHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----
Confidence            68899999988885433211         22477999999999999999888765311   11122333334343     


Q ss_pred             CCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhccC
Q 031423          120 PPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRNS  159 (160)
Q Consensus       120 ~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~~  159 (160)
                                  |.+.| |+|++|++|.++|..+...+.++
T Consensus       189 ------------Rv~~GvH~psDV~aG~~lG~~~~a~l~~~  217 (232)
T cd03397         189 ------------RIVCGVHWPSDVMGGRIMAAALVAALLAD  217 (232)
T ss_pred             ------------HHhcCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence                        78899 99999999999999997665543

These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.

>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily

Probab=98.51  E-value=1.1e-06  Score=72.71  Aligned_cols=93  Identities=20%  Similarity=0.077  Sum_probs=64.5

Q ss_pred             HHHhHHHHHHHhhhcccc----------------chhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCch--------
Q 031423           47 ALAQFLKIFTTWYKEKRW----------------DSKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSP--------   99 (160)
Q Consensus        47 ~vAQ~iK~~i~~~~~~~~----------------d~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~--------   99 (160)
                      ..+...|...++.|+-..                +|..+.   ...++||+|++..+++++.+....|-+..        
T Consensus       100 ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~~~~~~  179 (232)
T cd03398         100 IAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPDTVSEPD  179 (232)
T ss_pred             HHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccccc
Confidence            445678998888777321                132332   35699999999999999999988774321        


Q ss_pred             ----------HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423          100 ----------SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM  156 (160)
Q Consensus       100 ----------~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~  156 (160)
                                .+.....+|..+..+                 |.++| |.|.+|.+|..+|..++-.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~a~~~~~S-----------------Rvy~GvH~~sDv~~G~~lG~~va~~v  230 (232)
T cd03398         180 EGGPSTGVTRVWAELNELADEVAIS-----------------RVYAGVHFRSDDAAGAALGEQIGAAA  230 (232)
T ss_pred             cCCCCCCCcccHhHHHHHHHHHHHH-----------------HHhccccChHHHHHHHHHHHHHHHHH
Confidence                      223223333333333                 88999 99999999999999998543

Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.

>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]

Probab=98.26  E-value=2e-06  Score=77.37  Aligned_cols=103  Identities=18%  Similarity=0.278  Sum_probs=69.9

Q ss_pred             HHHHHHHHhHHHHHHHhhhccccchhhhhc------cCCCCchHHHHHHHHHHH----HHHHhCCCchHHHHHHHHHHHH
Q 031423           42 AFLAFALAQFLKIFTTWYKEKRWDSKKMLD------SGGMPSSHSATVSALAVA----IGLQEGSGSPSFAIAVVLACIL  111 (160)
Q Consensus        42 a~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~------sGGMPSSHSA~V~aLat~----igl~~G~~s~~Faia~v~A~Iv  111 (160)
                      -..+.-+.|.+|=.+-.-|++.+-..|+-.      .-||||+|+++.+|++-.    +...+-...|.+.+.+.++...
T Consensus       120 ~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EYG~PStHt~natais~~~~~~ls~~d~~s~p~~~lgl~lv~~y  199 (407)
T KOG2822|consen  120 WVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEYGMPSTHTMNATAISFYFFLVLSTMDRESYPIQYLGLSLVLLY  199 (407)
T ss_pred             HHHHHHHhhhhhheeecCCCCCCCeEEEEeccchhhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhHHHHHHHHHHHHH
Confidence            345667789999999888888776655432      359999999999988876    2233444555444433333321


Q ss_pred             HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423          112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus       112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~  157 (160)
                      .-.+.  +       .    |.|.| |+..|+++|.++|+++..+.+
T Consensus       200 ~~lv~--l-------g----RiY~GMHgvlDi~sG~ligvl~~~~~~  233 (407)
T KOG2822|consen  200 YALVC--L-------G----RIYCGMHGVLDIVSGLLIGVLILILRY  233 (407)
T ss_pred             HHHHH--H-------H----HHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence            11110  0       1    78999 999999999999999976543

>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]

Probab=98.17  E-value=2.4e-05  Score=68.77  Aligned_cols=103  Identities=19%  Similarity=0.225  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhcc-----ccchhh-------------hhccC-----------CCCchHHHHHHHHHHH
Q 031423           39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK-------------MLDSG-----------GMPSSHSATVSALAVA   89 (160)
Q Consensus        39 l~sa~~aw~vAQ~iK~~i~~~~~~-----~~d~~~-------------l~~sG-----------GMPSSHSA~V~aLat~   89 (160)
                      +...++..++..++|..+.++|++     ++|+..             +.-+|           .+||+|||+.++-++.
T Consensus       116 lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~f  195 (317)
T KOG3030|consen  116 LFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMGF  195 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHHH
Confidence            444555566679999999999996     566643             22234           6999999999999999


Q ss_pred             HHHH-----hCCC-chHHHHHHH-----HHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHHHhhc
Q 031423           90 IGLQ-----EGSG-SPSFAIAVV-----LACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus        90 igl~-----~G~~-s~~Faia~v-----~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~~  157 (160)
                      ++++     ...+ ++..=-.+.     +|+.+.-+.+.         +++       |-+.||++|+++|+.+|++.+
T Consensus       196 lalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~---------DYk-------HHwsDV~aG~liG~~~A~~~~  258 (317)
T KOG3030|consen  196 LALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVS---------DYK-------HHWSDVLAGALIGAFVAYFLY  258 (317)
T ss_pred             HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhc---------ccc-------cccHHHHHHHHHHHHHHHHHH
Confidence            9953     2222 322222222     23333222221         122       889999999999999998754

>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily

Probab=98.15  E-value=7.8e-06  Score=65.16  Aligned_cols=68  Identities=22%  Similarity=0.197  Sum_probs=49.9

Q ss_pred             cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHH
Q 031423           72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGC  150 (160)
Q Consensus        72 sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGi  150 (160)
                      .+.|||.|++..+.++..+.....  ..+..+..+++..+.-+                 +-++| |++.||++|+++|.
T Consensus       116 ~~~fPS~H~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~i~~s-----------------~v~~~~H~~~Dv~~G~~l~~  176 (186)
T cd03386         116 FNAFPSLHVAWAVLAALFLWRHRR--RLLRWLAVLWPLLIWLS-----------------TLYLGNHYFIDLVGGIALAL  176 (186)
T ss_pred             cceeCcHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-----------------HHHHCCccHHHHHHHHHHHH
Confidence            559999999999998888776543  12444455555554444                 45667 99999999999999


Q ss_pred             HHHHhhcc
Q 031423          151 VVAFLMRN  158 (160)
Q Consensus       151 via~i~~~  158 (160)
                      +...+.+.
T Consensus       177 ~~~~~~~~  184 (186)
T cd03386         177 LSFYLARR  184 (186)
T ss_pred             HHHHHhhc
Confidence            98876543

Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.

>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]

Probab=97.69  E-value=0.00045  Score=56.44  Aligned_cols=99  Identities=19%  Similarity=0.207  Sum_probs=63.9

Q ss_pred             HHHHHHHHHH-HhHHHHHHHhhhccccchhhhh----ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHH-HHHHHHHHH
Q 031423           39 LISAFLAFAL-AQFLKIFTTWYKEKRWDSKKML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAI-AVVLACILL  112 (160)
Q Consensus        39 l~sa~~aw~v-AQ~iK~~i~~~~~~~~d~~~l~----~sGGMPSSHSA~V~aLat~igl~~G~~s~~Fai-a~v~A~Ivl  112 (160)
                      +..++.=+++ -.++|.++.+-|+-+-.++.+-    .--.+||+|++=++-++.+..-..-..-|...+ -..||.++-
T Consensus        69 llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~a~Plyv~l~~~walvvg  148 (189)
T KOG4268|consen   69 LLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVLAVPLYVLLLVLWALVVG  148 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence            3444444444 3788988887777443333222    355899999976665544332222222244444 577788866


Q ss_pred             HHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHH
Q 031423          113 NQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAF  154 (160)
Q Consensus       113 n~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~  154 (160)
                      -+                 |..+| |+..||++|+.+|++=+-
T Consensus       149 lS-----------------Rv~lGRHyvtDVlaG~fiGylear  174 (189)
T KOG4268|consen  149 LS-----------------RVMLGRHYVTDVLAGFFIGYLEAR  174 (189)
T ss_pred             HH-----------------HHHHhhHHHHHHHHHHHHHHHHHH
Confidence            65                 67888 999999999999998764

>PF14378 PAP2_3: PAP2 superfamily

Probab=96.36  E-value=0.011  Score=46.98  Aligned_cols=62  Identities=24%  Similarity=0.208  Sum_probs=38.3

Q ss_pred             CCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHH
Q 031423           74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVV  152 (160)
Q Consensus        74 GMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivi  152 (160)
                      .|||.|.|...-.+..+.. .+.......+..+++.+++-..+                -.-+|+..|+++|++++.+.
T Consensus       127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~stv----------------~~~~HY~iDv~aG~~la~~~  188 (191)
T PF14378_consen  127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFSTV----------------YTGQHYVIDVIAGAALALLA  188 (191)
T ss_pred             ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHH----------------HhCcHHHHHHHHHHHHHHHH
Confidence            6999999986655555443 23222223455555555333321                11139999999999998865

>PF14360 PAP2_C: PAP2 superfamily C-terminal

Probab=85.86  E-value=3.1  Score=29.06  Aligned_cols=64  Identities=23%  Similarity=0.117  Sum_probs=35.9

Q ss_pred             CCchHHHHHHHHHHHHHHHhCCCchHHH-HHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423           75 MPSSHSATVSALAVAIGLQEGSGSPSFA-IAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA  153 (160)
Q Consensus        75 MPSSHSA~V~aLat~igl~~G~~s~~Fa-ia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia  153 (160)
                      |.|+|++..+..+..+.....-....+- +..+.+++..--++.         + +      .|+-.||+.|.++...+=
T Consensus         6 iFSGHt~~~~l~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~ii~---------s-r------~HYTvDV~~a~~it~~~f   69 (74)
T PF14360_consen    6 IFSGHTAFLTLCALFWWEYSPRRFWVLKVIMWLLAIIGSFLIIA---------S-R------KHYTVDVVLAYYITSLVF   69 (74)
T ss_pred             EEchhHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHH---------c-C------CCceeehhhHHHHHHHHH
Confidence            6899999988877666655432211111 122222221111110         0 1      299999999998887765


Q ss_pred             H
Q 031423          154 F  154 (160)
Q Consensus       154 ~  154 (160)
                      .
T Consensus        70 ~   70 (74)
T PF14360_consen   70 W   70 (74)
T ss_pred             H
Confidence            3

>COG4129 Predicted membrane protein [Function unknown]

Probab=85.40  E-value=1.2  Score=39.53  Aligned_cols=66  Identities=26%  Similarity=0.314  Sum_probs=47.4

Q ss_pred             CCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423           74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA  153 (160)
Q Consensus        74 GMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia  153 (160)
                      ||+.-+++...+||..++...|++.|.||  .+-|++-+..                -+..-.|+-.+-+.|..+|+++|
T Consensus        10 g~RtlKt~ia~~La~~ia~~l~~~~~~~A--~i~AV~~l~~----------------t~~~s~~~~~~r~~g~~iG~~~a   71 (332)
T COG4129          10 GARTLKTGLAAGLALLIAHLLGLPQPAFA--GISAVLCLSP----------------TIKRSLKRALQRLLGNALGAILA   71 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCchHHH--HHHHhhcccC----------------cchHHHHHHHHHHHHHHHHHHHH
Confidence            77888999999999999998898887666  3334431111                12222367788999999999998


Q ss_pred             Hhhc
Q 031423          154 FLMR  157 (160)
Q Consensus       154 ~i~~  157 (160)
                      .+++
T Consensus        72 ~l~~   75 (332)
T COG4129          72 VLFF   75 (332)
T ss_pred             HHHH
Confidence            7654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
2ipb_A	230	PHON protein, class A nonspecific acid phosphatase	99.1
1d2t_A	231	Acid phosphatase; all alpha, hydrolase; 1.90A {Esc	99.03
1qi9_A	556	Protein (vanadium bromoperoxidase); haloperoxidase	98.53
1up8_A	598	Vanadium-dependent bromoperoxidase 1; haloperoxida	97.66
3bb0_A	609	Vanadium chloroperoxidase; protein phosphate-inter	97.41

>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A

Probab=99.10  E-value=2.4e-10  Score=92.56  Aligned_cols=92  Identities=17%  Similarity=0.123  Sum_probs=66.6

Q ss_pred             HHHhHHHHHHHhhhccccch----hh-----hhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhh
Q 031423           47 ALAQFLKIFTTWYKEKRWDS----KK-----MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVC  117 (160)
Q Consensus        47 ~vAQ~iK~~i~~~~~~~~d~----~~-----l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~  117 (160)
                      ++.+++|..+++-|+...+.    ..     .-...+|||+|++..+++++.+.+...-.   ....+.++..+..+   
T Consensus        97 ~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S---  170 (230)
T 2ipb_A           97 YATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER---AQELARRGWEFGQS---  170 (230)
T ss_dssp             TTTHHHHHHHCCCCHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhCCCCcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence            67799999998877743221    11     12356999999999999999888775421   12234455555555   


Q ss_pred             cCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          118 EFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       118 ~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                                    |.++| |+|.||++|.++|+.++..+++
T Consensus       171 --------------Rv~~G~H~~sDVlaG~~lG~~~~~~~~~  198 (230)
T 2ipb_A          171 --------------RVICGAHWQSDVDAGRYVGAVEFARLQT  198 (230)
T ss_dssp             --------------HHHHTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             --------------HHhcCcccHHHHHHHHHHHHHHHHHHHc
Confidence                          78899 9999999999999999887654

>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A

Probab=99.03  E-value=4e-10  Score=91.41  Aligned_cols=92  Identities=16%  Similarity=0.107  Sum_probs=66.4

Q ss_pred             HHHhHHHHHHHhhhccccc----hhhh-----hccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhh
Q 031423           47 ALAQFLKIFTTWYKEKRWD----SKKM-----LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVC  117 (160)
Q Consensus        47 ~vAQ~iK~~i~~~~~~~~d----~~~l-----~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~  117 (160)
                      .+.+.+|..+++.|+...+    +...     -...+|||+|++..+++++.++...+-.   ....+.++..+..+   
T Consensus       109 ~~~~~lK~~~~r~RP~~~~~~~~~~p~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S---  182 (231)
T 1d2t_A          109 LATRSAKDHYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQR---QNEILKRGYELGQS---  182 (231)
T ss_dssp             TTTHHHHHHHCCCCHHHHHTCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhCCCCcCccCCCCceecCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence            5678999999887773221    2111     1345999999999999999988875421   22234445555555   


Q ss_pred             cCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          118 EFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       118 ~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                                    |.++| |+|.||++|.++|..++..+.+
T Consensus       183 --------------RvylGvH~psDVlaG~~lG~~~~~~~~~  210 (231)
T 1d2t_A          183 --------------RVICGYHWQSDVDAARVVGSAVVATLHT  210 (231)
T ss_dssp             --------------HHHHTSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             --------------HHhcCCcCHHHHHHHHHHHHHHHHHHHc
Confidence                          78899 9999999999999999887654

>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2

Probab=98.53  E-value=3.7e-07  Score=83.90  Aligned_cols=96  Identities=21%  Similarity=0.276  Sum_probs=65.5

Q ss_pred             HHHHhHHHHHHHhhhcc--ccchhhhhc---------cCCCCchHHHHHHHHHHHHHHHhCCC-------ch--------
Q 031423           46 FALAQFLKIFTTWYKEK--RWDSKKMLD---------SGGMPSSHSATVSALAVAIGLQEGSG-------SP--------   99 (160)
Q Consensus        46 w~vAQ~iK~~i~~~~~~--~~d~~~l~~---------sGGMPSSHSA~V~aLat~igl~~G~~-------s~--------   99 (160)
                      |.-.|++|.++++-|+-  ..+|..++.         ..++||+||+..+++++.+....|-+       .+        
T Consensus       374 ~~~~~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~  453 (556)
T 1qi9_A          374 LENAELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGL  453 (556)
T ss_dssp             HTCHHHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSS
T ss_pred             hhhhhHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence            33347899999988873  344544432         34999999999999999998775310       10        


Q ss_pred             --------HHHH---HHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423          100 --------SFAI---AVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  158 (160)
Q Consensus       100 --------~Fai---a~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~  158 (160)
                              ...+   ...+|..+..+                 |.|+| |+|.+|++|.++|..++..+.+
T Consensus       454 ~r~~~~~~~l~~~~~l~~lA~lIg~S-----------------RVYlGVHYPSDVlaG~lLG~~va~~vl~  507 (556)
T 1qi9_A          454 KLIDFRGSCLTFEGEINKLAVNVAFG-----------------RQMLGIHYRFDGIQGLLLGETITVRTLH  507 (556)
T ss_dssp             SEEECCSSCCBHHHHHHHHHHHHHHH-----------------HHHTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccceeehhhHHHHHHHHHHHH-----------------HHeeCccCHHHHHHHHHHHHHHHHHHHH
Confidence                    0111   11133333333                 88999 9999999999999999976643

>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A

Probab=97.66  E-value=8.6e-05  Score=68.85  Aligned_cols=69  Identities=20%  Similarity=0.067  Sum_probs=50.0

Q ss_pred             cCCCCchHHHHHHHHHHHHHHHhCCCc----h--------------------HHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 031423           72 SGGMPSSHSATVSALAVAIGLQEGSGS----P--------------------SFAIAVVLACILLNQIVCEFPPDHPLSS  127 (160)
Q Consensus        72 sGGMPSSHSA~V~aLat~igl~~G~~s----~--------------------~Faia~v~A~Ivln~l~~~~~~~~~~~~  127 (160)
                      ...+||+||+..+|.++.+....+-+.    +                    +......+|..+..+             
T Consensus       480 ~pSYPSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~S-------------  546 (598)
T 1up8_A          480 HPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIG-------------  546 (598)
T ss_dssp             SCSSSCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHH-------------
T ss_pred             CCCCChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHH-------------
Confidence            459999999999999999998865432    0                    011112223333333             


Q ss_pred             CCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423          128 VRPLRELLG-HTPLQVVAGGILGCVVAFLMR  157 (160)
Q Consensus       128 ~~~LkE~lG-Htp~EVl~GallGivia~i~~  157 (160)
                          |.|+| |+|.+|++|..+|..++..+.
T Consensus       547 ----RVYlGVHypSDVlAG~~LG~aVa~~vl  573 (598)
T 1up8_A          547 ----RNMAGVHYFSDQFESLLLGEQVAIGIL  573 (598)
T ss_dssp             ----HHHHTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hheeeeecHHHHHHHHHHHHHHHHHHH
Confidence                88999 999999999999999987653

>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A

Probab=97.41  E-value=0.00029  Score=65.36  Aligned_cols=45  Identities=11%  Similarity=-0.130  Sum_probs=33.9

Q ss_pred             hHHHHHHHhhhc------------cccchhhhhc-------------cCCCCchHHHHHHHHHHHHHHHh
Q 031423           50 QFLKIFTTWYKE------------KRWDSKKMLD-------------SGGMPSSHSATVSALAVAIGLQE   94 (160)
Q Consensus        50 Q~iK~~i~~~~~------------~~~d~~~l~~-------------sGGMPSSHSA~V~aLat~igl~~   94 (160)
                      -..|...+++|+            ...+|..+..             ...+||+||+...|.++.+....
T Consensus       350 w~~K~~y~R~RP~taI~~~~~~~~~dp~w~~l~~~~~~~~~~~~tP~~pSYPSGHAt~s~A~A~vL~~~f  419 (609)
T 3bb0_A          350 WKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYY  419 (609)
T ss_dssp             HHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTSSSCCBCCSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhcCCCcCchhhcccccccCCccchhhcccccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            447998888887            1234544431             35899999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1d2ta_	224	Bacterial acid phosphatase {Escherichia blattae [T	98.55

>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]}

class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

Probab=98.55  E-value=1e-07  Score=76.08  Aligned_cols=67  Identities=21%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHH
Q 031423           71 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILG  149 (160)
Q Consensus        71 ~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallG  149 (160)
                      .++++||+|++..+++++.++........   .-+.+|..+..+                 |.+.| |+|++|++|.++|
T Consensus       136 ~~~SfPSGHa~~a~~~a~~la~~~p~~~~---~~~~~a~~~~~S-----------------Rv~~g~H~~sDv~aG~~lG  195 (224)
T d1d2ta_         136 KNGSYPSGHTSIGWATALVLAEINPQRQN---EILKRGYELGQS-----------------RVICGYHWQSDVDAARVVG  195 (224)
T ss_dssp             SSCCSSCHHHHHHHHHHHHHHHHCGGGHH---HHHHHHHHHHHH-----------------HHHHTSSCHHHHHHHHHHH
T ss_pred             CCCCcCchhHHHHHHHHHHHHHHhHHHHH---HHHHHHHHhhhH-----------------HHHcccccHHHHHHHHHHH
Confidence            36799999999999999998887643222   122334334333                 77888 9999999999999


Q ss_pred             HHHHHhhc
Q 031423          150 CVVAFLMR  157 (160)
Q Consensus       150 ivia~i~~  157 (160)
                      ..+...+.
T Consensus       196 ~ai~a~l~  203 (224)
T d1d2ta_         196 SAVVATLH  203 (224)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            87765443