Citrus Sinensis ID: 031460

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MEIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Secondary Structure (PSIPRED)
cccHHHHEEEEEEEEEEEccccccccccEEEEEEEccccccccccEEEEEEEEEcccccEEEEccccccccccccccccccccEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEEEEcccccEEEEEEEEccEEEcccccccEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHcHcEEEEccccccEEEEEEEEEccccccccccEEEEEEEcccccccccEccccccccccccccccccccEEEEEEEccccccccEEEEEEEcccccccccEEEEEEEEEccccccccEEEEEcHHHHccccccccEEEEEEEEEc
Coil and Loop (DISEMBL)
MEIKNLLLSLFLLLSisniafaddsddcvYTVYIrtgsifkggtdsiiGVTLYDAVGDGVRISNleawgglmgpgynyfergnldifsgrgpclggpvcalnlssdgsgehhgwYCNYVEVTStgvhtrcaqQQFTIEQwlatdtspyelSVFRIIATM
Flexible Loop (DISEMBL)
MEIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRtgsifkggtdsIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIeqwlatdtspyelSVFRIIATM
Low Complexity Region (SEG)
MEIKNlllslflllsisNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Disordered region (IsUnstruct)
***KNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIA**
Disordered Region (DISOPRED)
*****LLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Disordered Region (DISEMBL)
MEIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Disordered Region (DISPRO)
*EIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRIIATM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
C8YR32	2068	Lipoxygenase homology dom	yes	no	0.654	0.050	0.274	2e-05
Q8IVV2	1947	Lipoxygenase homology dom	no	no	0.654	0.053	0.274	3e-05

>sp|C8YR32|LOXH1_MOUSE Lipoxygenase homology domain-containing protein 1 OS=Mus musculus GN=Loxhd1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 30   YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
            YTV ++T  I   GTD+ + + ++   GD   ++  ++        +N FER N D F+ 
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1735

Query: 90   RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
                  G +C L +  D  G   GW+ +YV+V     ++R    +F  + WL+
Sbjct: 1736 SDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFRFQCDCWLS 1785

Required for normal function of hair cells in the inner ear.
Mus musculus (taxid: 10090)

>sp|Q8IVV2|LOXH1_HUMAN Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens GN=LOXHD1 PE=2 SV=3

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 30   YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
            YTV ++T  I   GTD+ + + ++   GD   ++  ++        +N FER N D F+ 
Sbjct: 1609 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1662

Query: 90   RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
                  G +C L +  D  G   GW+ +YV+V     ++R     F  + WL+
Sbjct: 1663 PDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFHFQCDCWLS 1712

Involved in hearing. Required for normal function of hair cells in the inner ear.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
449451447	181	PREDICTED: lipoxygenase homology domain-	0.937	0.823	0.728	7e-59
357463399	189	hypothetical protein MTR_3g087510 [Medic	0.823	0.693	0.801	1e-58
224083709	171	predicted protein [Populus trichocarpa]	0.955	0.888	0.711	1e-58
388505694	189	unknown [Medicago truncatula]	0.849	0.714	0.786	2e-58
297825099	183	lipid-associated family protein [Arabido	0.937	0.814	0.693	5e-58
297797992	181	lipid-associated family protein [Arabido	0.968	0.850	0.670	1e-57
21553555	182	dehydration stress-induced protein [Arab	0.937	0.818	0.686	2e-57
217071160	191	unknown [Medicago truncatula] gi|3885152	0.817	0.680	0.792	3e-57
357463395	191	Elicitor-inducible protein EIG-J7 [Medic	0.817	0.680	0.792	4e-57
18399899	183	PLAT-plant-stress domain-containing prot	0.937	0.814	0.68	6e-57

>gi|449451447|ref|XP_004143473.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativus] gi|449522674|ref|XP_004168351.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativus]

 Score =  231 bits (589), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 110/151 (72%), Positives = 124/151 (82%), Gaps = 2/151 (1%)

Query: 1   MEIKNLLLSLFLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGV 60
           M  K+ L    +LLS S IAF+D+ D CVYTVYIRTGSI K GTDS+I  TLY A GDG+
Sbjct: 1   MATKSALF-FSILLSFSAIAFSDNPD-CVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 58

Query: 61  RISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVE 120
           RI +LE WGGLMGPGYNYFERGNLDIFSGRGPCL GPVC+LNL+SDGSG HHGWYCNY+E
Sbjct: 59  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 118

Query: 121 VTSTGVHTRCAQQQFTIEQWLATDTSPYELS 151
           VT+TGVH+ C QQ FT+EQWLA D SPY L+
Sbjct: 119 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLT 149

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463399|ref|XP_003601981.1| hypothetical protein MTR_3g087510 [Medicago truncatula] gi|355491029|gb|AES72232.1| hypothetical protein MTR_3g087510 [Medicago truncatula]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 105/131 (80%), Positives = 116/131 (88%)

Query: 24  DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGN 83
           + +DCVYTVY+RTGSIFKGGTDSIIG+ LYD+ G G+ I NLE WGGLMGP YNY+ERGN
Sbjct: 25  EDEDCVYTVYVRTGSIFKGGTDSIIGLKLYDSYGYGIYIKNLELWGGLMGPDYNYYERGN 84

Query: 84  LDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT 143
           LDIFSG+GPCL GPVCA+NL+SDGSG HHGWYCNYVEVTSTGVH  CAQQQF +EQWLAT
Sbjct: 85  LDIFSGKGPCLEGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHIPCAQQQFEVEQWLAT 144

Query: 144 DTSPYELSVFR 154
           DTSPYELS  R
Sbjct: 145 DTSPYELSAVR 155

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083709|ref|XP_002307094.1| predicted protein [Populus trichocarpa] gi|118483838|gb|ABK93810.1| unknown [Populus trichocarpa] gi|222856543|gb|EEE94090.1| predicted protein [Populus trichocarpa]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/156 (71%), Positives = 126/156 (80%), Gaps = 4/156 (2%)

Query: 1   MEIKNLLLSL--FLLLSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGD 58
           M +  L LSL  FL LS++ IAF+D+  DCVYTVYIRTGSI KGGTDSII V LYD+ G 
Sbjct: 1   MSVTTLHLSLIPFLFLSLATIAFSDE--DCVYTVYIRTGSIIKGGTDSIISVRLYDSYGK 58

Query: 59  GVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNY 118
           G+ + +LE WGGLM PG+NYFERGNLDIFSGR PCL  PVCALNL+SDGSG  HGWY NY
Sbjct: 59  GLEVPDLERWGGLMEPGHNYFERGNLDIFSGRAPCLSSPVCALNLTSDGSGSGHGWYVNY 118

Query: 119 VEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFR 154
           VEVT+TGVH  C+Q+QFTIEQWLA DTSPYEL+  R
Sbjct: 119 VEVTTTGVHAACSQKQFTIEQWLALDTSPYELTAIR 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505694|gb|AFK40913.1| unknown [Medicago truncatula]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/136 (78%), Positives = 119/136 (87%), Gaps = 1/136 (0%)

Query: 19  IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNY 78
           IA ++D +DCVYTVY+RTGSIFKGGTDSIIG+ LYD+ G G+ I NLE WGGLMGP YNY
Sbjct: 21  IATSED-EDCVYTVYVRTGSIFKGGTDSIIGLKLYDSYGYGIYIKNLELWGGLMGPDYNY 79

Query: 79  FERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIE 138
           +ERGNLDIFSG+GPCL GPVCA+NL+SDGSG HHGWYCNYVEVTSTGVH  CAQQQ  +E
Sbjct: 80  YERGNLDIFSGKGPCLEGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHIPCAQQQLEVE 139

Query: 139 QWLATDTSPYELSVFR 154
           QWLATDTSPYELS  R
Sbjct: 140 QWLATDTSPYELSAVR 155

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825099|ref|XP_002880432.1| lipid-associated family protein [Arabidopsis lyrata subsp. lyrata] gi|297326271|gb|EFH56691.1| lipid-associated family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 123/150 (82%), Gaps = 1/150 (0%)

Query: 6   LLLSLFLLLS-ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISN 64
           L LSL L+++ +S +AFADD  DCVYT Y+RTGSIFK GTDSII   +YD  GD + I N
Sbjct: 8   LFLSLLLVIATVSAVAFADDEADCVYTFYLRTGSIFKAGTDSIISARVYDKYGDYIGIRN 67

Query: 65  LEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTST 124
           LEAWGGLMGPGYNY+ERGNLDIFSG+ PCL  PVC+LNL+SDGSG+HHGWY NYVEVT+ 
Sbjct: 68  LEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTA 127

Query: 125 GVHTRCAQQQFTIEQWLATDTSPYELSVFR 154
           GVH +C+ Q F +EQWLA+DTSP+ELS  R
Sbjct: 128 GVHAKCSYQSFDVEQWLASDTSPHELSAVR 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797992|ref|XP_002866880.1| lipid-associated family protein [Arabidopsis lyrata subsp. lyrata] gi|297312716|gb|EFH43139.1| lipid-associated family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 123/155 (79%), Gaps = 1/155 (0%)

Query: 1   MEIKNLLLSLFLLLS-ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDG 59
           M  ++++L   LLL+ +S +AFA D  DCVYT Y+RTGSI+K GTDSII   +YD  GD 
Sbjct: 1   MARRDVVLPFLLLLATVSAVAFAVDDPDCVYTFYLRTGSIWKAGTDSIISARVYDKYGDY 60

Query: 60  VRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYV 119
           + I NL+AWGGLMGP YNYFERGNLDIFSGR PCL  P+CALNL+SDGSG+HHGWY NYV
Sbjct: 61  IGIKNLQAWGGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYANYV 120

Query: 120 EVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFR 154
           EVT+ GVH +C+ Q F IEQWLATDTSPYEL+  R
Sbjct: 121 EVTTAGVHAQCSTQDFEIEQWLATDTSPYELTAVR 155

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553555|gb|AAM62648.1| dehydration stress-induced protein [Arabidopsis thaliana]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 121/150 (80%), Gaps = 1/150 (0%)

Query: 6   LLLSLFLLLS-ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISN 64
           L LSL L+++ +S +A ADD  DCVYT Y+RTGS FK GTDSII   +YD  GD + I N
Sbjct: 7   LFLSLLLVIATVSAVALADDEADCVYTFYLRTGSTFKAGTDSIISARVYDKYGDYIGIRN 66

Query: 65  LEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTST 124
           LEAWGGLMGPGYNY+ERGNLDIFSG+ PCL  PVC+LNL+SDGSG+HHGWY NYVEVT+ 
Sbjct: 67  LEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTA 126

Query: 125 GVHTRCAQQQFTIEQWLATDTSPYELSVFR 154
           GVH +C+ Q F +EQWLA+DTSPYELS  R
Sbjct: 127 GVHAKCSYQSFDVEQWLASDTSPYELSAVR 156

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071160|gb|ACJ83940.1| unknown [Medicago truncatula] gi|388515293|gb|AFK45708.1| unknown [Medicago truncatula]

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 113/130 (86%)

Query: 25  SDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNL 84
           SDDCVYTVY+RTGSI K GTDSI+ +TLY+A G G+ I +LEAWGGLMG GYNYFERGNL
Sbjct: 24  SDDCVYTVYVRTGSIIKAGTDSIMTLTLYNANGYGILIRDLEAWGGLMGSGYNYFERGNL 83

Query: 85  DIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
           DIFSGRGPCL GPVC +NL+SDGSG HHGWYCNYVEVT+TG H  CAQQQF +EQWLATD
Sbjct: 84  DIFSGRGPCLDGPVCNMNLTSDGSGSHHGWYCNYVEVTTTGAHIPCAQQQFEVEQWLATD 143

Query: 145 TSPYELSVFR 154
           TSPYELS  R
Sbjct: 144 TSPYELSAIR 153

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463395|ref|XP_003601979.1| Elicitor-inducible protein EIG-J7 [Medicago truncatula] gi|355491027|gb|AES72230.1| Elicitor-inducible protein EIG-J7 [Medicago truncatula] gi|388500744|gb|AFK38438.1| unknown [Medicago truncatula]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 113/130 (86%)

Query: 25  SDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNL 84
           SDDCVYTVY+RTGSI K GTDSI+ +TLY+A G G+ I +LEAWGGLMG GYNYFERGNL
Sbjct: 24  SDDCVYTVYVRTGSIIKAGTDSIMTLTLYNADGYGILIRDLEAWGGLMGSGYNYFERGNL 83

Query: 85  DIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
           DIFSGRGPCL GPVC +NL+SDGSG HHGWYCNYVEVT+TG H  CAQQQF +EQWLATD
Sbjct: 84  DIFSGRGPCLDGPVCNMNLTSDGSGSHHGWYCNYVEVTTTGAHIPCAQQQFEVEQWLATD 143

Query: 145 TSPYELSVFR 154
           TSPYELS  R
Sbjct: 144 TSPYELSAIR 153

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399899|ref|NP_565527.1| PLAT-plant-stress domain-containing protein [Arabidopsis thaliana] gi|4567207|gb|AAD23623.1| expressed protein [Arabidopsis thaliana] gi|27754389|gb|AAO22643.1| unknown protein [Arabidopsis thaliana] gi|28393941|gb|AAO42378.1| unknown protein [Arabidopsis thaliana] gi|330252180|gb|AEC07274.1| PLAT-plant-stress domain-containing protein [Arabidopsis thaliana]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 102/150 (68%), Positives = 121/150 (80%), Gaps = 1/150 (0%)

Query: 6   LLLSLFLLLS-ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISN 64
           L LSL L+++ +S +A ADD  DCVYT ++RTGS FK GTDSII   +YD  GD + I N
Sbjct: 8   LFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRN 67

Query: 65  LEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTST 124
           LEAWGGLMGPGYNY+ERGNLDIFSG+ PCL  PVC+LNL+SDGSG+HHGWY NYVEVT+ 
Sbjct: 68  LEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTA 127

Query: 125 GVHTRCAQQQFTIEQWLATDTSPYELSVFR 154
           GVH +C+ Q F +EQWLA+DTSPYELS  R
Sbjct: 128 GVHAKCSYQSFDVEQWLASDTSPYELSAVR 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2060410	183	PLAT2 "AT2G22170" [Arabidopsis	0.855	0.743	0.705	7e-54
TAIR|locus:2135217	181	PLAT1 "AT4G39730" [Arabidopsis	0.855	0.751	0.705	8.9e-54
TAIR|locus:1009023406	104	PLAT3 "AT5G65158" [Arabidopsis	0.647	0.990	0.653	7.2e-36
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.566	0.422	0.323	1.8e-06
UNIPROTKB|F1NGR6	1118	F1NGR6 "Uncharacterized protei	0.723	0.102	0.285	1.1e-05
MGI|MGI:1914609	2068	Loxhd1 "lipoxygenase homology	0.654	0.050	0.274	1.3e-05
UNIPROTKB|F2Z3T3	121	F2Z3T3 "Uncharacterized protei	0.566	0.743	0.382	1.5e-05
UNIPROTKB|F1MXT4	997	LOXHD1 "Uncharacterized protei	0.698	0.111	0.282	2e-05
UNIPROTKB|Q8IVV2	1947	LOXHD1 "Lipoxygenase homology	0.654	0.053	0.274	2e-05
RGD|1304815	996	Loxhd1 "lipoxygenase homology	0.723	0.115	0.268	2.5e-05

TAIR|locus:2060410 PLAT2 "AT2G22170" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 96/136 (70%), Positives = 111/136 (81%)

Query:    19 IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNY 78
             +A ADD  DCVYT ++RTGS FK GTDSII   +YD  GD + I NLEAWGGLMGPGYNY
Sbjct:    22 VALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNY 81

Query:    79 FERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIE 138
             +ERGNLDIFSG+ PCL  PVC+LNL+SDGSG+HHGWY NYVEVT+ GVH +C+ Q F +E
Sbjct:    82 YERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVE 141

Query:   139 QWLATDTSPYELSVFR 154
             QWLA+DTSPYELS  R
Sbjct:   142 QWLASDTSPYELSAVR 157

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:2135217 PLAT1 "AT4G39730" [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 96/136 (70%), Positives = 111/136 (81%)

Query:    19 IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNY 78
             +AFA+D  DCVYT Y+RTGSI+K GTDSII   +YD  GD + I NL+AW GLMGP YNY
Sbjct:    20 VAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDYIGIKNLQAWAGLMGPDYNY 79

Query:    79 FERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIE 138
             FERGNLDIFSGR PCL  P+CALNL+SDGSG+HHGWY NYVE+T+ GVH +C+ Q F IE
Sbjct:    80 FERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYVEITTAGVHAQCSTQDFEIE 139

Query:   139 QWLATDTSPYELSVFR 154
             QWLATDTSPYEL+  R
Sbjct:   140 QWLATDTSPYELTAVR 155

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:1009023406 PLAT3 "AT5G65158" [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 68/104 (65%), Positives = 83/104 (79%)

Query:    48 IGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG 107
             + + LYD+ G    IS+L +WGGLMGP ++YFERGNLDIFSG G CL GPVCA+NL+SDG
Sbjct:     1 MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query:   108 SGEHHGWYCNYVEVTSTGVHTR-CAQQQFTIEQWLATDTSPYEL 150
             SG+HHGWYCNYVEVT +    R C+Q++F +EQWLA D SPYEL
Sbjct:    61 SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 32/99 (32%), Positives = 47/99 (47%)

Query:    28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLM-GPGYNYFERGNLDI 86
             C YTV + T  +    T   I +   DA G+ V    L   GGL+ GPG     + + + 
Sbjct:    34 CPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKL---GGLVRGPGG--LGKCSTNT 88

Query:    87 FSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTG 125
             F  RG CL  P+C+L ++ +G     GW    +E+ S G
Sbjct:    89 FQVRGQCLNDPICSLYINRNGPD---GWVPESIEIYSEG 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

UNIPROTKB|F1NGR6 F1NGR6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
             Y V ++TG     GTD+ + +TLY +  D   I +L+A   L     N FERG +D F+ 
Sbjct:    61 YIVKVKTGDKKNAGTDANVFITLYGSKDD-TGIVSLKA-SKL---NKNKFERGKIDEFTV 115

Query:    90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWL--ATDTSP 147
                 +G  +  + +  D +G  +GW+  +VE+ +  +  +C +  F   +WL  + D   
Sbjct:   116 ESVDIGD-LKKIKIGHDNAGNSNGWFLEWVEIDAPSLG-QCLK--FPCGRWLDKSEDDGA 171

Query:   148 YELSVF 153
              E  +F
Sbjct:   172 IERFIF 177

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0032420 "stereocilium" evidence=IEA

MGI|MGI:1914609 Loxhd1 "lipoxygenase homology domains 1" [Mus musculus (taxid:10090)]

 Score = 118 (46.6 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 31/113 (27%), Positives = 54/113 (47%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
             YTV ++T  I   GTD+ + + ++   GD   ++  ++        +N FER N D F+ 
Sbjct:  1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1735

Query:    90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
                   G +C L +  D  G   GW+ +YV+V     ++R    +F  + WL+
Sbjct:  1736 SDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFRFQCDCWLS 1785

GO:0003674 "molecular_function" evidence=ND

GO:0007605 "sensory perception of sound" evidence=ISO;IMP

GO:0032420 "stereocilium" evidence=IDA

GO:0042995 "cell projection" evidence=IEA

UNIPROTKB|F2Z3T3 F2Z3T3 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 39/102 (38%), Positives = 48/102 (47%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGD-GVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
             Y V + TG     GTD+ + VT++ A GD G R         L     N FERG+ D F 
Sbjct:     4 YEVIVTTGYEPGAGTDANVFVTIFGANGDTGKR--------ELKQKMRNLFERGSTDRFF 55

Query:    89 GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVT--STGVHT 128
                  LG  +  + L  D SG + GW    VEVT  STGV T
Sbjct:    56 LETLELG-ELRKVRLEHDSSGYYSGWLVEKVEVTNTSTGVAT 96

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0032420 "stereocilium" evidence=IEA

UNIPROTKB|F1MXT4 LOXHD1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 35/124 (28%), Positives = 59/124 (47%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLY-DAVGD-GVRISNLEAWGGLMGPGYNYFERGNLDIF 87
             Y + + TG++ K GTD+ + +T+Y +  GD G R   L+          N FE+G  D F
Sbjct:   796 YEIQVITGNVPKAGTDANVFLTIYGEEYGDTGER--PLKK-----SDKSNKFEQGQTDTF 848

Query:    88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP 147
             +     LG P+  + +  D SG   GW+ + +++T            F  ++WLA +   
Sbjct:   849 TIYAIDLG-PLTKIRIRHDNSGNRPGWFLDRIDITDMNNEIT---YYFPCQRWLAVEEDD 904

Query:   148 YELS 151
              +LS
Sbjct:   905 GQLS 908

GO:0032420 "stereocilium" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

UNIPROTKB|Q8IVV2 LOXHD1 "Lipoxygenase homology domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 116 (45.9 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 31/113 (27%), Positives = 53/113 (46%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
             YTV ++T  I   GTD+ + + ++   GD   ++  ++        +N FER N D F+ 
Sbjct:  1609 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1662

Query:    90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
                   G +C L +  D  G   GW+ +YV+V     ++R     F  + WL+
Sbjct:  1663 PDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFHFQCDCWLS 1712

GO:0032420 "stereocilium" evidence=ISS

GO:0007605 "sensory perception of sound" evidence=IMP

RGD|1304815 Loxhd1 "lipoxygenase homology domains 1" [Rattus norvegicus (taxid:10116)]

 Score = 112 (44.5 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 33/123 (26%), Positives = 56/123 (45%)

Query:    30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
             Y + ++TG +    TDS + + LY    D ++   L +   L     +YFERG +D F+ 
Sbjct:   453 YHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVLLVSDNNLK----DYFERGRVDEFTL 508

Query:    90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYE 149
                 +G  +  L +  D +G H GW+   V++    V  +  Q  F   +WL  + +   
Sbjct:   509 ETLNIG-TIIRLVIGHDSTGMHAGWFLGSVQIR---VPRQGKQYTFPANRWLDKNQADGR 564

Query:   150 LSV 152
             L V
Sbjct:   565 LEV 567

GO:0007605 "sensory perception of sound" evidence=ISO

GO:0032420 "stereocilium" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_V2845 SubName- Full=Putative uncharacterized protein; (171 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
cd01754	129	cd01754, PLAT_plant_stress, PLAT/LH2 domain of pla	1e-75
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	5e-19
pfam01477	115	pfam01477, PLAT, PLAT/LH2 domain	7e-17
cd01756	120	cd01756, PLAT_repeat, PLAT/LH2 domain repeats of f	2e-15
cd01752	120	cd01752, PLAT_polycystin, PLAT/LH2 domain of polyc	2e-06
cd01753	113	cd01753, PLAT_LOX, PLAT domain of 12/15-lipoxygena	2e-04

>gnl|CDD|238852 cd01754, PLAT_plant_stress, PLAT/LH2 domain of plant-specific single domain protein family with unknown function

 Score =  221 bits (564), Expect = 1e-75
 Identities = 84/127 (66%), Positives = 99/127 (77%)

Query: 28  CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF 87
           CVYT+Y++TGSI+K GTDS I + +YDA G G+RI+NLEAWGGLMG G++YFERGNLD F
Sbjct: 1   CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRF 60

Query: 88  SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP 147
           SGRGPCL  P C +NL+SDG+G H GWY NYVEVT  G H  C Q  F +EQWLATD SP
Sbjct: 61  SGRGPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDESP 120

Query: 148 YELSVFR 154
           Y L+  R
Sbjct: 121 YMLTAVR 127

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 129

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 77.0 bits (190), Expect = 5e-19
 Identities = 41/126 (32%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 28  CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF 87
           C YTV I+TG     GTDS I + LY   G+   I  L+  G         FERG+ D F
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPGS--------FERGSTDTF 52

Query: 88  SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWL---ATD 144
                   G +  + L  DGSG   GWYC  + V + G         F + +W+      
Sbjct: 53  QIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYT---FPVNRWVLGGKWY 109

Query: 145 TSPYEL 150
           TS   L
Sbjct: 110 TSVRSL 115

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain

 Score = 71.6 bits (176), Expect = 7e-17
 Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
           Y V ++TG     GTD+ + ++LY   G       LE             +RG+ D F+ 
Sbjct: 1   YQVKVKTGDELGAGTDANVYISLYGTHGKSGEYPLLEPELKP-------DDRGSTDSFTF 53

Query: 90  RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYE 149
                 G + A+ +  + +G    W+   + V S           F    W+  D S   
Sbjct: 54  DTDEDLGDLGAIKIRWEINGHSDEWFLKSILVKSGPTG---GTYTFPCNSWVYGDKSYKL 110

Query: 150 LSVFR 154
             VF 
Sbjct: 111 TRVFF 115

This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich. Length = 115

>gnl|CDD|238854 cd01756, PLAT_repeat, PLAT/LH2 domain repeats of family of proteins with unknown function

 Score = 67.6 bits (166), Expect = 2e-15
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 12/117 (10%)

Query: 29  VYTVYIRTGSIFKGGTDSIIGVTLYDAVGD-GVRISNLEAWGGLMGPGYNYFERGNLDIF 87
            Y V ++TG +   GTD+ + +TLY   GD G R   L+          N FERG  D F
Sbjct: 2   TYEVTVKTGDVKGAGTDANVFITLYGENGDTGKR--KLKKSNNK-----NKFERGQTDKF 54

Query: 88  SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
           +     L G +  + +  D SG   GW+ + VE+   G      +  F   +WL  D
Sbjct: 55  TVEAVDL-GKLKKIRIGHDNSGLGAGWFLDKVEIREPGTGD---EYTFPCNRWLDKD 107

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 120

>gnl|CDD|238850 cd01752, PLAT_polycystin, PLAT/LH2 domain of polycystin-1 like proteins

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 22/121 (18%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF-- 87
           Y V + TG     GT + + +TLY A G+            L  P    FERG++D F  
Sbjct: 3   YLVTVFTGWRRGAGTTAKVTITLYGAEGESEPHH-------LRDPEKPIFERGSVDSFLL 55

Query: 88  SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV----TSTGVHTRCAQQQFTIEQWLAT 143
           +   P   G + ++ L  D SG    WY + V V    T            F    WL+ 
Sbjct: 56  TTPFPL--GELQSIRLWHDNSGLSPSWYLSRVIVRDLQTGKKWF-------FLCNDWLSV 106

Query: 144 D 144
           +
Sbjct: 107 E 107

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins. Length = 120

>gnl|CDD|238851 cd01753, PLAT_LOX, PLAT domain of 12/15-lipoxygenase

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 29  VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
            Y V + TGS    GTD  I +TL    G+            L  PGY+ FERG +D + 
Sbjct: 2   EYKVTVATGSSLFAGTDDYIYLTLVGTAGE-------SEKQLLDRPGYD-FERGAVDEYK 53

Query: 89  GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTG 125
            + P   G +  + L          W+CNY+ VT  G
Sbjct: 54  VKVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTGPG 90

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates. Length = 113

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	100.0
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	100.0
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	100.0
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	100.0
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	99.98
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.97
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.97
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.96
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.96
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	99.88
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	99.8
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	99.68
KOG2080	1295	consensus Uncharacterized conserved protein, conta	99.02
cd01759	113	PLAT_PL PLAT/LH2 domain of pancreatic triglyceride	98.87
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	98.15
cd01751	137	PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re	93.02

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=100.00  E-value=3.2e-41  Score=253.36  Aligned_cols=127  Identities=66%  Similarity=1.238  Sum_probs=115.6

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      |.|+|+|+||++++|||||+|+|+|+|++|++.+..++++++||+.++++.||||++|+|.+..++++|+|++|+|||||
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HDn   80 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSDG   80 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCcccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEECC
Confidence            68999999999999999999999999999998766555567788888899999999999999998889999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCe-eeeEEEecccceeccCCCceeEEEEe
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTR-CAQQQFTIEQWLATDTSPYELSVFRI  155 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~-~~~~~F~~~rWl~~d~~~~~l~~~~~  155 (159)
                      +|.+|+|||++|+|++.+++ + ..+|+|||+|||+.|++|++|+|+++
T Consensus        81 ~G~~p~W~l~~V~V~d~~~~-~~~~~~~F~c~rWLa~d~~~~~~~~~~~  128 (129)
T cd01754          81 TGNHPGWYVNYVEVTQAGQH-APCMQHLFAVEQWLATDESPYMLTAVRN  128 (129)
T ss_pred             CCCCCCcccCEEEEEeCCCC-CcCcEEEEEecEeccCCCCcceeEEEec
Confidence            99999999999999997664 2 12399999999999999999999986

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=100.00  E-value=2.5e-36  Score=223.39  Aligned_cols=119  Identities=27%  Similarity=0.374  Sum_probs=109.3

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      +.|+|+|+||++++|||||+|+|+|+|++|++.+ ..|++      +.+++||||++|+|.+..+.++|+|++|+||||+
T Consensus         1 ~~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s~~-~~L~~------~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~   73 (120)
T cd01752           1 YLYLVTVFTGWRRGAGTTAKVTITLYGAEGESEP-HHLRD------PEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDN   73 (120)
T ss_pred             CEEEEEEEECCCCCCCcccEEEEEEEeCCCCccc-EEcCC------CCccceeCCCeeEEEecCccCCCCccEEEEEECC
Confidence            4799999999999999999999999999998854 45654      5568999999999999998789999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCCceeEEEEee
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRII  156 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~~~l~~~~~~  156 (159)
                      +|..|+|||++|+|++++++ +.  |.|||+|||+.+++|++++|++-+
T Consensus        74 ~g~~~~W~l~~V~V~~~~t~-~~--~~F~~~rWl~~~~~d~~~~r~~~~  119 (120)
T cd01752          74 SGLSPSWYLSRVIVRDLQTG-KK--WFFLCNDWLSVEEGDGTVERTFPV  119 (120)
T ss_pred             CCCCCCeEEEEEEEEECCCC-cE--EEEEeCcEECCcCCCCEEEEEEEC
Confidence            99999999999999999887 55  999999999999999999999864

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=100.00  E-value=5.3e-35  Score=216.16  Aligned_cols=116  Identities=28%  Similarity=0.453  Sum_probs=106.9

Q ss_pred             EEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCC-CCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGP-GYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        29 ~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p-~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      .|+|+|+||++++|||||+|+|+|+|++|++. ...|++      + .++.||||++|+|.+++ .++|+|++|+||||+
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~s~-~~~L~~------~~~~~~FerGs~d~F~i~~-~~lG~l~~i~i~~d~   73 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGDTG-KRKLKK------SNNKNKFERGQTDKFTVEA-VDLGKLKKIRIGHDN   73 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCccc-cEEccC------CCcCCcccCCCeEEEEEEe-cCCCCeEEEEEEECC
Confidence            69999999999999999999999999999875 456765      3 57899999999999999 579999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCCceeEEEEe
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRI  155 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~~~l~~~~~  155 (159)
                      .|..++|||++|+|++.+++ +.  |.|||+|||+.+++|+.++|++-
T Consensus        74 ~g~~~~W~~~~V~V~~~~~~-~~--~~F~~~~Wl~~~~~dg~~~r~~~  118 (120)
T cd01756          74 SGLGAGWFLDKVEIREPGTG-DE--YTFPCNRWLDKDEDDGQIVRELY  118 (120)
T ss_pred             CCCCCCcEEeEEEEEECCCc-eE--EEEEeCCccCCCCCCCEEEEEEE
Confidence            99999999999999999877 55  99999999999999999999874

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=100.00  E-value=9.4e-34  Score=208.23  Aligned_cols=105  Identities=30%  Similarity=0.509  Sum_probs=94.2

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      ..|+|+|+||++++|||||+|+|+|+|++|++.. ..|++      +. .+||||++|+|.++.+.++|+|++|+||||+
T Consensus         1 ~~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~S~~-~~L~~------~~-~~FerG~~d~F~v~~~~~lG~l~~i~i~~d~   72 (113)
T cd01753           1 AEYKVTVATGSSLFAGTDDYIYLTLVGTAGESEK-QLLDR------PG-YDFERGAVDEYKVKVPEDLGELLLVRLRKRK   72 (113)
T ss_pred             CEEEEEEEECCCcCCccccEEEEEEEECCCcccC-EEcCC------CC-CccCCCCeeEEEEecccCCCCcEEEEEEECC
Confidence            3799999999999999999999999999998864 45654      33 3599999999999998889999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      +|..|+|||++|+|++++ + +.  |.|||+|||+++
T Consensus        73 ~g~~~~W~l~~V~V~~~~-~-~~--~~F~c~rWl~~~  105 (113)
T cd01753          73 YLLFDAWFCNYITVTGPG-G-DE--YHFPCYRWIEGY  105 (113)
T ss_pred             CCCCCCeeecEEEEEcCC-C-CE--EEEEhHHeECCC
Confidence            999999999999999887 5 44  999999999875

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=99.98  E-value=1e-31  Score=197.89  Aligned_cols=106  Identities=16%  Similarity=0.161  Sum_probs=93.2

Q ss_pred             EEEEEEEcCCC-CCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           29 VYTVYIRTGSI-FKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        29 ~Y~V~V~TG~~-~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      .|+|+|+||++ ++|||||||+|+|+|++|++.+ ..|++         +.|      .|.+.. .+||+|.+|+|||||
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~s~~-~~L~~---------~~f------~~~v~~-~~LG~L~~irIwHDn   64 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGETPP-LQIPK---------NSL------EMTFDC-QNLGKLTTVQIGHDN   64 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCCcCC-EEecC---------Cce------EEEEec-CCcCCcEEEEEEECC
Confidence            69999999999 5999999999999999998754 45543         333      466666 579999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCC-----ceeEEEE
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP-----YELSVFR  154 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~-----~~l~~~~  154 (159)
                      +|..|+|||++|+|++.+++ +.  |+|||+|||+.+++|     ++++|.+
T Consensus        65 sG~~~~Wfl~~V~V~d~~t~-~~--~~FpC~rWLa~~~~D~~~~~g~~~r~l  113 (114)
T cd01757          65 SGLLAKWLVEYVMVRNEITG-HT--YKFPCGRWLGEGVDDGNGEDGSLERVL  113 (114)
T ss_pred             CCCCCCeeeeEEEEEeCCCC-CE--EEEecCceecCCCCcccccCCeEEEEe
Confidence            99999999999999998777 55  999999999999999     9999986

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.97  E-value=1.5e-30  Score=189.70  Aligned_cols=108  Identities=35%  Similarity=0.623  Sum_probs=96.8

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      |.|+|+|+||++.+|||||+|+|+|+|++|++.....++.      + .. ||||++|+|.++.++++|+|++|+|+||+
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~~~~l~~~------~-~~-f~~g~~~~f~v~~~~~lG~i~~v~l~~d~   72 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDG------P-GS-FERGSTDTFQIDLKLDIGDITKVYLRRDG   72 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcccEEccCC------C-Cc-ccCCCceEEEEeccCCCcCeEEEEEEECC
Confidence            5899999999999999999999999999999876544432      2 22 99999999999998789999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCC
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTS  146 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~  146 (159)
                      .|..|+|||++|+|++.+++ +.  +.|+|++||+.+..
T Consensus        73 ~g~~~~W~l~~V~V~~~~~~-~~--~~F~~~~Wl~~~~~  108 (116)
T cd00113          73 SGLSDGWYCESITVQALGTK-KV--YTFPVNRWVLGGKW  108 (116)
T ss_pred             CCCCCCEEEeEEEEEeCCCC-CE--EEEEeCCCcccCCC
Confidence            99999999999999998876 54  99999999998876

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.97  E-value=3.3e-30  Score=188.56  Aligned_cols=106  Identities=30%  Similarity=0.493  Sum_probs=90.3

Q ss_pred             EEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecCC
Q 031460           29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGS  108 (159)
Q Consensus        29 ~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~~  108 (159)
                      .|+|+|+||+..+|||+|+|+|+|+|++|++.+. .|          .++|+||++|+|.++ +.+||+|..|+|+  |.
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S~~~-~L----------~~~F~~G~~d~F~v~-~~dLG~l~~i~l~--n~   67 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRSNPK-TL----------SQGFYPGSLKRIRFR-AADVGDINAIILS--NT   67 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCcCCE-Ec----------cCccCCCceEEEEEC-ccccCceEEEEEE--CC
Confidence            6999999999999999999999999999988654 44          346999999999999 6779999999995  45


Q ss_pred             CCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCCceeEEEEe
Q 031460          109 GEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRI  155 (159)
Q Consensus       109 G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~~~l~~~~~  155 (159)
                      |..++|||++|+|+++ ++ +.  |+|||+|||+.   |+.-..+++
T Consensus        68 g~~~~Wf~~~V~V~~~-~g-~~--~~Fpc~rWla~---~~~~~v~~~  107 (109)
T cd02899          68 ALNDPWYCDYVRIKSE-DG-KV--FAFNVKRWIGY---PYEQSVEVS  107 (109)
T ss_pred             CCCCCceeeEEEEECC-CC-CE--EEEEcceeeCC---chhceEEEe
Confidence            5899999999999984 45 44  89999999998   555444443

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.96  E-value=9.6e-29  Score=178.09  Aligned_cols=112  Identities=30%  Similarity=0.466  Sum_probs=97.4

Q ss_pred             EEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecCCC
Q 031460           30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSG  109 (159)
Q Consensus        30 Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~~G  109 (159)
                      |+|+|+||+..+|||||+|+|+|+|++|++.....++.       ....+  |++|+|.+..+.++|+|.+|+|+|++.+
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s~~~~l~~~-------~~~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~   71 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKSGEIELLDP-------SGFNF--GSTDTFTIETPEDLGEIQKIRIWHDGSG   71 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEEEEEEEEEE-------EETST--TEEEEEEEEESSCGCSEEEEEEEEESSS
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCcceEEEeee-------eeccc--CceEEeeeeecccCCCCcEEEEEEccCC
Confidence            99999999999999999999999999999876544433       11222  9999999999778999999999999999


Q ss_pred             CCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCCceeEEEE
Q 031460          110 EHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFR  154 (159)
Q Consensus       110 ~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~~~l~~~~  154 (159)
                      ..++|||++|+|++..++ ..  |.|||++||..++ ++..+|.+
T Consensus        72 ~~~~W~l~~V~V~~~~~~-~~--~~F~~~~Wl~~~~-~~~~~rvf  112 (113)
T PF01477_consen   72 PSPSWYLDSVVVTDGETG-RT--YTFPCNRWLDPDK-DYKTERVF  112 (113)
T ss_dssp             SSSEEEEEEEEEEETTTS-EE--EEEEEEEEESTTE-GCSSEEEE
T ss_pred             CccceEEEEEEEEeCCCC-cE--EEEEcCCEECCCC-CCCCccEE
Confidence            999999999999997777 55  9999999999988 77777764

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.96  E-value=6.8e-28  Score=173.03  Aligned_cols=104  Identities=23%  Similarity=0.327  Sum_probs=89.4

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      ..|+|+|+||++.+|||||+|+|+|+|++|++.. ..+..      ..+..|+||++++|.++.+.++|+|.+|+|+||+
T Consensus         1 ~~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s~~-~~~~~------~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~   73 (105)
T smart00308        1 GKYKVTVTTGGLDFAGTTASVSLSLVGAEGDGKE-SKLDY------LFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEH   73 (105)
T ss_pred             CEEEEEEEECCccCCCccceEEEEEEeCCCCCcc-eeccc------cCCccccCCceEEEEEecccCCCCcEEEEEEeCC
Confidence            3799999999999999999999999999976432 22322      1235699999999999998889999999999999


Q ss_pred             CCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceec
Q 031460          108 SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       108 ~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~  143 (159)
                      +  .++|||++|+|++.+++ +.  ++|+|++||+.
T Consensus        74 ~--~~~w~l~~V~V~~~~~~-~~--~~F~c~~Wl~~  104 (105)
T smart00308       74 R--HPEWFLKSITVKDLPTG-GK--YHFPCNSWVYP  104 (105)
T ss_pred             C--CCCeEEEEEEEEECCCC-CE--EEEEcCceeCC
Confidence            7  79999999999998776 54  99999999975

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=99.88  E-value=3.6e-22  Score=148.71  Aligned_cols=106  Identities=34%  Similarity=0.617  Sum_probs=94.2

Q ss_pred             CCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCC-CccccCCeeEEEeeCCCCCCCcEEEEE
Q 031460           25 SDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGY-NYFERGNLDIFSGRGPCLGGPVCALNL  103 (159)
Q Consensus        25 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~-~~Fergs~D~F~i~~~~~lG~i~~I~I  103 (159)
                      .+.|.|+|+|+|++...|||+++|+|.+.++.|+.....+|++      |.. +.|||+++|+|.+.++| +.+||+|.|
T Consensus        11 ~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~------p~~~~~FErCs~DtF~v~G~C-~~~IC~lyL   83 (125)
T PF06232_consen   11 AGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDD------PGSGDTFERCSTDTFQVTGPC-LYQICYLYL   83 (125)
T ss_pred             CCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCC------CCccCchhcCCcceeEeeccc-CCcccEEEE
Confidence            3469999999999999999999999999999999988888876      665 89999999999999999 779999999


Q ss_pred             EecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          104 SSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       104 ~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      .+++.   ++|++++|+|......  .  ..|.+++||..+
T Consensus        84 ~r~G~---dGW~Pe~V~Iy~~~~~--~--~~F~~~~~lp~~  117 (125)
T PF06232_consen   84 YRSGS---DGWKPEWVQIYGSGSK--P--VTFYFNTFLPNG  117 (125)
T ss_pred             EEccC---CCCEeCeEEEEEcCCC--C--eEEECCCcCCCC
Confidence            99764   8999999999886433  2  799999999663

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=99.80  E-value=8.4e-19  Score=130.00  Aligned_cols=95  Identities=13%  Similarity=0.063  Sum_probs=84.1

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      +.|+|+|.||.+.+|||+++|+|.|+|++|++.. ..|..         ..|++|++++|.+.++.++|+|.+|++||||
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s~~-~~l~~---------~~~~~g~~~sfli~t~~~lG~l~~v~~~~dn   70 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGETEQ-LPIVL---------GELKPNKTYSFLIDTEVDIGDLLKVKFKWEN   70 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCccc-EEEeC---------CcccCCCEEEEEEEcCCCccceEEEEEEEcC
Confidence            4799999999999999999999999999999864 45533         3479999999999999999999999999999


Q ss_pred             CCC-------CCCeeeeEEEEEeCCCCCeeeeEEE
Q 031460          108 SGE-------HHGWYCNYVEVTSTGVHTRCAQQQF  135 (159)
Q Consensus       108 ~G~-------~~~W~l~~V~V~~~~~~~~~~~~~F  135 (159)
                      ++.       .|.||+++|.|++.+++ ++  +.|
T Consensus        71 ~~~~~~~~~~~p~~~~~~I~Vq~get~-~~--~~F  102 (120)
T cd01755          71 NVINSNSGETLPKLGARKIRVKSGETQ-KK--FTF  102 (120)
T ss_pred             CCcccccccCCCcEEEEEEEEEECCCC-CE--EEE
Confidence            983       68999999999998877 55  666

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=99.68  E-value=4.9e-16  Score=117.89  Aligned_cols=96  Identities=17%  Similarity=0.155  Sum_probs=83.1

Q ss_pred             eEEEEEEEcCCCCCCC-CCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEE-Ee
Q 031460           28 CVYTVYIRTGSIFKGG-TDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNL-SS  105 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AG-Tda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I-~h  105 (159)
                      +.|+|+|.|+.+..|| |+++|+|.|+|++|++.. ..|..        ...+++|++++|.|.++.++|+|..|++ ||
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S~~-~~l~~--------~~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~   71 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGESEN-LPLTL--------PEGITGNKTNSFLITTEKDIGDLLMLKLKWE   71 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcccC-EEEec--------CcccCCCCeEEEEEECCCCcCCEEEEEEEEe
Confidence            4799999999999999 999999999999999854 45533        2456999999999999999999999999 99


Q ss_pred             cCCCCCCCee------------------eeEEEEEeCCCCCeeeeEEE
Q 031460          106 DGSGEHHGWY------------------CNYVEVTSTGVHTRCAQQQF  135 (159)
Q Consensus       106 d~~G~~~~W~------------------l~~V~V~~~~~~~~~~~~~F  135 (159)
                      ||.+..++||                  .++|.|+..+++ ++  +.|
T Consensus        72 ~n~~~~~sW~~~~~~~~~~~~~~~p~l~~~~I~Vk~GEtq-~~--~~F  116 (137)
T cd01758          72 GSSLWSNSWWTVQTIIPWSGWWRGSGLTIRKIRVKAGETQ-KK--MTF  116 (137)
T ss_pred             CCCCCChhhhccccccccccccCCCeEEEEEEEEEeCCCc-cE--EEE
Confidence            9999998985                  789999987766 54  666

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]

Probab=99.02  E-value=2.7e-10  Score=105.98  Aligned_cols=98  Identities=22%  Similarity=0.297  Sum_probs=82.2

Q ss_pred             CeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEec
Q 031460           27 DCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSD  106 (159)
Q Consensus        27 ~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd  106 (159)
                      ...|+|.|.||  .+.|+.+||+|.+-|+-+++.+ ..+.       |  +      +-.|++... ++|.+.-++|.||
T Consensus       973 k~~Y~vvIv~~--~g~~~~~~iWi~vsGsl~eT~~-i~~~-------~--n------~~~f~F~~k-NLG~LtT~rIGHd 1033 (1295)
T KOG2080|consen  973 KMDYQVVIVTG--SGRGAIPAIWVTVEGSLCSTPP-IMLK-------P--N------TPLFKFDHK-NLGILSTLRIGHQ 1033 (1295)
T ss_pred             ccceEEEEEeC--CCCcccCceEEEEecccCCCCc-eeeC-------C--C------CceeEEecc-ccceeeeEEeccc
Confidence            45699999999  7899999999999999988754 4442       2  2      334777776 4999999999999


Q ss_pred             CCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCC
Q 031460          107 GSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTS  146 (159)
Q Consensus       107 ~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~  146 (159)
                      ++|...-|++++|.|++.-++ ..  |.|||.||++..+.
T Consensus      1034 nS~~~~kW~vEyV~vRNEiTG-~T--YKFPCGrw~G~ged 1070 (1295)
T KOG2080|consen 1034 QSEKPVQWFLEYVLVRNEITG-QT--YKFPCGRWFGNGED 1070 (1295)
T ss_pred             CCCcchHHHHHHhhhhceecc-ce--eccccccccCCccc
Confidence            999999999999999998777 54  99999999987543

>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase

Probab=98.87  E-value=4.6e-08  Score=72.07  Aligned_cols=95  Identities=16%  Similarity=0.067  Sum_probs=76.1

Q ss_pred             EEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecCC
Q 031460           29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGS  108 (159)
Q Consensus        29 ~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~~  108 (159)
                      .|+|+|.-.....  ++..++|.|+|.+|++. ...+.         ...|+.|++.+|.|..+.++|++.+|.++.++.
T Consensus         2 ~Yqv~V~~s~~~~--~~g~~~vsL~G~~g~s~-~~~i~---------~g~l~pg~tys~li~~d~dvG~l~~Vkf~W~~~   69 (113)
T cd01759           2 RYKVSVTLSGKKK--VTGTILVSLYGNKGNTR-QYEIF---------KGTLKPGNTYSAFIDVDVDVGPLTKVKFIWNNN   69 (113)
T ss_pred             eEEEEEEEecccc--cCceEEEEEEcCCCCcc-ceEEE---------eeeecCCCEEEEEEEccCCCCCEEEEEEEEeCC
Confidence            6999998877644  89999999999999985 34453         235999999999999998999999999988887


Q ss_pred             CCC---CCeeeeEEEEEeCCCCCeeeeEEEeccc
Q 031460          109 GEH---HGWYCNYVEVTSTGVHTRCAQQQFTIEQ  139 (159)
Q Consensus       109 G~~---~~W~l~~V~V~~~~~~~~~~~~~F~~~r  139 (159)
                      ...   |.=+.++|.|+..+++ ++  +.| |-+
T Consensus        70 ~~n~~~p~~~~~~I~Vq~Ge~~-~~--~~F-C~~   99 (113)
T cd01759          70 VINITLPKVGAEKITVQSGKDG-KV--FNF-CSS   99 (113)
T ss_pred             ccCCCCCeEEEEEEEEEeCCCc-cE--EEE-CCC
Confidence            654   4455999999988766 44  666 444

Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=98.15  E-value=3.8e-05  Score=68.37  Aligned_cols=98  Identities=13%  Similarity=0.074  Sum_probs=77.2

Q ss_pred             CCCeEEEEEEEcCCCCC-CCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEE
Q 031460           25 SDDCVYTVYIRTGSIFK-GGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNL  103 (159)
Q Consensus        25 ~~~~~Y~V~V~TG~~~~-AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I  103 (159)
                      .....|+|+|...+... .+++..++|.|+|++|++.. ..+.         ...++.|.+.+|.|..+.++|++.+|++
T Consensus       306 f~~~~y~v~v~~~~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~---------~~~~~~~~t~~~~i~~~~~~g~~~~v~~  375 (442)
T TIGR03230       306 YKVFHYQVKVHFFGKTSLSHTDQPMKISLYGTHGEKEN-IPFT---------LPEVSTNKTYSFLITTDVDIGELLMVKL  375 (442)
T ss_pred             ceEEEEEEEEEEeccccccccCCcEEEEEEcCCCCccc-eEEe---------eeeecCCCeEEEEEecccCCCceEEEEE
Confidence            34678999999987654 47899999999999999853 4442         2359999999999999999999999999


Q ss_pred             EecCCCC--------CCCeeeeEEEEEeCCCCCeeeeEEE
Q 031460          104 SSDGSGE--------HHGWYCNYVEVTSTGVHTRCAQQQF  135 (159)
Q Consensus       104 ~hd~~G~--------~~~W~l~~V~V~~~~~~~~~~~~~F  135 (159)
                      +.++...        .|.=+.++|+|+..+++ ++  +.|
T Consensus       376 ~w~~~~~~~~~~~~~~~~~~~~~i~v~~ge~~-~~--~~f  412 (442)
T TIGR03230       376 KWEKDTYISWSDWWSSPGFHIRKLRIKSGETQ-SK--VIF  412 (442)
T ss_pred             EEeCCCcccchhhhcCCceeEEEEEEEeCCCc-cE--EEE
Confidence            7777653        24445899999987766 44  666

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins

Probab=93.02  E-value=1.3  Score=33.68  Aligned_cols=54  Identities=15%  Similarity=0.334  Sum_probs=39.4

Q ss_pred             EEEee--CCCCCCCcEEEEEEecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460           86 IFSGR--GPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus        86 ~F~i~--~~~~lG~i~~I~I~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      .|.++  .+.+.|.+=.+.|...-   ..--|++.|++...... ..  .+|+||.|+....
T Consensus        71 ~y~~~F~v~~~fG~pGAi~V~N~h---~~EffLksitLe~~p~~-g~--v~F~CNSWVyp~~  126 (137)
T cd01751          71 AYEAEFEVPASFGPPGAVLVKNEH---HSEFFLKSITLEGFGGS-GT--ITFVCNSWVYPKK  126 (137)
T ss_pred             EEEEEEEeecccCCccEEEEEECC---CceEEEEEEEEeCCCCC-cc--EEEEccccCccCC
Confidence            55533  45679999999997443   35789999999775332 23  7999999998654

Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	5e-22
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	2e-14
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	3e-12
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	8e-12
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	5e-10
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	7e-09
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	6e-07

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 90.4 bits (223), Expect = 5e-22
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 8/120 (6%)

Query: 24  DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGN 83
                 Y + + TG +   GTD+ + + L    G      +L+ +        N FE G 
Sbjct: 16  HHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFH------NDFESGG 69

Query: 84  LDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQ-QFTIEQWLA 142
            D +   G  + G +  + L  +G G    WY   V +      T  + +  F   +W+ 
Sbjct: 70  TDTYDQSGVDV-GEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVI 128

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662

 Score = 68.4 bits (166), Expect = 2e-14
 Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 29  VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
           VY V + TG+    G+ + + + L    G+                      R   + F 
Sbjct: 2   VYRVCVSTGASIYAGSKNKVELWLVGQHGEVEL------------GSCLRPTRNKEEEFK 49

Query: 89  GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
                  G +  + L      +   W+CN++ V    +     +  F   +W+  D
Sbjct: 50  VNVSKYLGSLLFVRLRKKHFLKEDAWFCNWISV--QALGAAEDKYWFPCYRWVVGD 103

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 23  DDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERG 82
                 +Y V + TG     GTD+ I + +  A G          +  L       FE G
Sbjct: 2   HHHHHAIYNVEVETGDREHAGTDATITIRITGAKGRT-------DYLKLDKGS---FEAG 51

Query: 83  NLDIFSGRGPCLGGPVCALNLSSDGSGE---HHGWYCNYVEVTSTGVHTRCAQQQFTIEQ 139
           + + ++ +G  + G +  + L SDG G       W+ N V + S+          F   +
Sbjct: 52  SKEQYTVQGFDV-GDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVY---SFPCFR 107

Query: 140 WLATD 144
           W+  D
Sbjct: 108 WVIKD 112

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691

 Score = 61.1 bits (147), Expect = 8e-12
 Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
           YTV + TGS    GTD  I ++L  + G                     FERG +D +  
Sbjct: 24  YTVTVATGSQEHAGTDDYIYLSLVGSAGC----------SEKHLLDKGSFERGAVDSYDV 73

Query: 90  RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPY 148
                 G +  + +     G +  WY  Y+ +            +F   +W+  D    
Sbjct: 74  TVDEELGEIQLVRIEKRKYGSNDDWYLKYITLK----TPHGDYIEFPCYRWITGDVEVV 128

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Length = 370

 Score = 55.8 bits (133), Expect = 5e-10
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 16/130 (12%)

Query: 23  DDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERG 82
            D D     V I+T  +   GTD+ I   +    G     + L+  G       N F R 
Sbjct: 251 KDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-LDNPG-------NDFTRN 302

Query: 83  NLDIFSGRGPCLG---GPVCALNLSSDGSGEHH-GWYCNYVEVTSTGVHTRCAQQQFTIE 138
               ++ +          +  + +  +       GW  +YV+V +        + +  I 
Sbjct: 303 QEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDK----VRLEKNIN 358

Query: 139 QWLATDTSPY 148
           +W++  T+  
Sbjct: 359 EWISGGTTYT 368

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Length = 370

 Score = 52.3 bits (124), Expect = 7e-09
 Identities = 15/121 (12%), Positives = 37/121 (30%), Gaps = 16/121 (13%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
              YI T      GTD  +   +    G       ++  G       N F  G+ D ++ 
Sbjct: 258 LVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNPG-------NDFMTGSKDTYTF 309

Query: 90  RGPCLGGPVCALNL----SSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT 145
           +       +  +          +     +    +++ + G           I +W++ ++
Sbjct: 310 KLKDENLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIANGK----VVVDKDINEWISGNS 365

Query: 146 S 146
           +
Sbjct: 366 T 366

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Length = 384

 Score = 47.0 bits (110), Expect = 6e-07
 Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 21/120 (17%)

Query: 26  DDCVYTVYIRTGSIFKG-GTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNL 84
               Y + I       G    +   + +   +G+   +                  R  L
Sbjct: 246 ILIPYHILIVPSKKLGGSMFTANPWICISGELGETQIL---------------QIPRNVL 290

Query: 85  DIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
           ++         G +  + +  D SG +  W    V V +          +F   +WL   
Sbjct: 291 EMTFECQNL--GKLTTVQIGHDNSGLYAKWLVECVMVRNEVTGHTY---KFPCGRWLGKG 345

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.96
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.95
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.95
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.94
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.94
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.93
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.91
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.9
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	99.43
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	99.4
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	99.39
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	99.3
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	99.22
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	97.15
2iuk_A	864	SEED lipoxygenase; iron, dioxygenase, metal-bindin	83.58
1f8n_A	839	Lipoxygenase-1; dioxygenase, metalloprotein, fatty	80.54

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.96  E-value=4.9e-29  Score=228.00  Aligned_cols=110  Identities=22%  Similarity=0.371  Sum_probs=98.4

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCC-eeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGD-GVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~-s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~  102 (159)
                      ..+++.|+|+|+||++++|||||+|+|+|+|++|+ +. ...|++      |++++||||++|+|.+++ .++|+|++|+
T Consensus        16 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~-~~~L~~------~~~~~FeRGs~D~F~v~~-~~LG~L~~Ir   87 (698)
T 3vf1_A           16 HHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETS-AFSLDK------YFHNDFESGGTDTYDQSG-VDVGEIAMIT   87 (698)
T ss_dssp             ---CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCC-CEEECC------BCSSSSCCCCEEEEEEEE-CCCSSEEEEE
T ss_pred             CCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeec-ceEeCC------CCCCccccCCeeEEEEEe-cccCCceEEE
Confidence            34689999999999999999999999999999999 64 557776      567999999999999999 5699999999


Q ss_pred             EEecCCCCCCCeeeeEEEEEeCCC----CCeeeeEEEecccceecc
Q 031460          103 LSSDGSGEHHGWYCNYVEVTSTGV----HTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       103 I~hd~~G~~~~W~l~~V~V~~~~~----~~~~~~~~F~~~rWl~~d  144 (159)
                      |||||+|.+++|||++|+|+++++    + +.  |.|||+|||+.+
T Consensus        88 I~hDnsG~~~~Wfl~~V~V~~~~t~~~~g-~~--~~Fpc~rWL~~d  130 (698)
T 3vf1_A           88 LKENGFGLKSDWYIAKVIIEKIDEATGFS-NK--YIFPCYRWVIKQ  130 (698)
T ss_dssp             EEECCCSSBCCCEEEEEEEEEECTTTCCE-EE--EEEEEEEECSSE
T ss_pred             EEECCCCCCCCeEEeEEEEEcCCCCCCCC-cE--EEEEhhhcccCC
Confidence            999999999999999999999876    4 44  999999999986

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.95  E-value=3.3e-28  Score=222.30  Aligned_cols=111  Identities=24%  Similarity=0.389  Sum_probs=94.9

Q ss_pred             cccCCCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcE
Q 031460           20 AFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVC   99 (159)
Q Consensus        20 ~~~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~   99 (159)
                      -.+...+.+.|+|+|+||++++|||||+|+|+|+|++|++.. ..|+         .++||||++|+|.++++.++|+|+
T Consensus        14 ~~~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S~~-~~L~---------~~~FeRG~~D~F~v~~~~~LG~L~   83 (691)
T 3v98_A           14 LVPRGSHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCSEK-HLLD---------KGSFERGAVDSYDVTVDEELGEIQ   83 (691)
T ss_dssp             ---------CEEEEEEECCSTTCCBCSEEEEEEEESSCBCCC-EECC---------SSCBCTTCEEEEEECCSSCCCSEE
T ss_pred             cccCCCCceeEEEEEEECCCCCCCCCceeEEEEEECCCceee-EEec---------CCcccCCCeeEEEEEeccCCCCce
Confidence            345666799999999999999999999999999999999754 4563         289999999999999988899999


Q ss_pred             EEEEEecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          100 ALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       100 ~I~I~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      +|+|||||+|.+++|||++|+|++++ + +.  |.|||+|||+.+
T Consensus        84 ~IrI~hDnsG~~~~Wfl~~V~V~~~~-g-~~--~~Fpc~rWL~~d  124 (691)
T 3v98_A           84 LVRIEKRKYGSNDDWYLKYITLKTPH-G-DY--IEFPCYRWITGD  124 (691)
T ss_dssp             EEEEEEECSSSCCCEEEEEEEEECTT-S-CE--EEEEEEEEECSS
T ss_pred             EEEEEECCCCCCCCeEEeEEEEECCC-C-cE--EEEehHHhcCCC
Confidence            99999999999999999999999997 6 55  999999999986

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.95  E-value=1.1e-27  Score=206.50  Aligned_cols=112  Identities=13%  Similarity=0.127  Sum_probs=99.6

Q ss_pred             CCCeEEEEEEEcCCCCC-CCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEE
Q 031460           25 SDDCVYTVYIRTGSIFK-GGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNL  103 (159)
Q Consensus        25 ~~~~~Y~V~V~TG~~~~-AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I  103 (159)
                      ...+.|+|+|+||++.+ |||||+|+|+|+|++|++.. ..|++               +.|.|.++.. ++|+|++|+|
T Consensus       245 tt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S~~-~~L~~---------------~~d~F~v~~~-~LG~L~~I~I  307 (384)
T 3cwz_B          245 TILIPYHILIVPSKKLGGSMFTANPWICISGELGETQI-LQIPR---------------NVLEMTFECQ-NLGKLTTVQI  307 (384)
T ss_dssp             TSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBCCC-EECCT---------------TCCEEEEEEE-CCCSEEEEEE
T ss_pred             ccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCccc-EEecc---------------cCceEEEecc-cCCCceEEEE
Confidence            35789999999999998 79999999999999999854 45643               1578999964 6999999999


Q ss_pred             EecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccCCCceeEEEEee
Q 031460          104 SSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYELSVFRII  156 (159)
Q Consensus       104 ~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~~~~~l~~~~~~  156 (159)
                      ||||+|.+|+|||++|+|++++++ +.  |+|||+|||+.+++|++++|++-.
T Consensus       308 ~HDnsG~~p~Wfl~~V~V~d~~tg-~~--~~Fpc~rWL~~d~~DG~i~R~l~~  357 (384)
T 3cwz_B          308 GHDNSGLYAKWLVECVMVRNEVTG-HT--YKFPCGRWLGKGMDDGSLERVLVG  357 (384)
T ss_dssp             EECCCSSCCCEEEEEEEEEETTTC-CE--EEEEEEEEESTTSTTCCSEEEEEC
T ss_pred             EECCCCCCCceeEeEEEEEeCCCC-cE--EEEECceeCCCCCCCCeEEEEEec
Confidence            999999999999999999999887 55  999999999999999999999843

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.94  E-value=2.7e-27  Score=224.34  Aligned_cols=108  Identities=28%  Similarity=0.442  Sum_probs=93.1

Q ss_pred             CCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEe
Q 031460           26 DDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSS  105 (159)
Q Consensus        26 ~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~h  105 (159)
                      +.+.|+|+|+||++++|||||+|+|+|+|++|++. ...|++      |++++||||++|+|.+++ .++|+|++|+|||
T Consensus       372 ~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S~-~~~L~~------~~~~~FeRGs~d~F~v~~-~~LG~L~~IrI~h  443 (1066)
T 3dy5_A          372 QNAIYNVEVETGDREHAGTDATITIRITGAKGRTD-YLKLDK------WFHNDFEAGSKEQYTVQG-FDVGDIQLIELHS  443 (1066)
T ss_dssp             -CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBCC-CEEC-------------CCTTCEEEEEEEC-SCCSSEEEEEEEC
T ss_pred             CceeEEEEEEECCCCCCCCCceeEEEEEECCCcee-eEEeCC------CCcCccccCCcceEEEEE-ecCCCceEEEEEE
Confidence            57999999999999999999999999999999975 456776      567999999999999999 7899999999999


Q ss_pred             cCCCC---CCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          106 DGSGE---HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       106 d~~G~---~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      |++|.   .++|||++|+|++++++ +.  |.|||+|||+.+
T Consensus       444 DnsG~~~~~~~Wfl~~V~V~~~~tg-~~--~~Fpc~rWL~~d  482 (1066)
T 3dy5_A          444 DGGGYWSGDPDWFVNRVIIISSTQD-RV--YSFPCFRWVIKD  482 (1066)
T ss_dssp             CCCC--CCCCCEEEEEEEEEESSSS-SC--EEEEEEEEESSE
T ss_pred             CCCCCCCCCCCeEEeEEEEEeCCCC-CE--EEEehhhhccCC
Confidence            99986   89999999999999877 55  999999999986

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.94  E-value=7.5e-27  Score=213.53  Aligned_cols=105  Identities=27%  Similarity=0.449  Sum_probs=95.9

Q ss_pred             CCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEe
Q 031460           26 DDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSS  105 (159)
Q Consensus        26 ~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~h  105 (159)
                      .++.|.|+|+||++++|||||+|+|+|+|++|++. ...|+         .++||||++|+|.+++ .++|+|++|+|||
T Consensus         5 ~~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S~-~~~L~---------~~~FeRGs~d~F~v~~-~dLG~L~~IrI~h   73 (696)
T 3fg1_A            5 HHAIYNVEVETGDREHAGTDATITIRITGAKGRTD-YLKLD---------KGSFEAGSKEQYTVQG-FDVGDIQLIELHS   73 (696)
T ss_dssp             CEEEEEEEEEECSSTTCCBCSCEEEEEEETTEECC-CEEEC---------SSCBCTTCEEEEEEEE-ECCSSEEEEEEEE
T ss_pred             ccceeeEEEEeCCCCCCCCCceeEEEEEECCCcee-eEEeC---------CCCcCCCCccEEEEEE-ccCCCceEEEEEE
Confidence            46789999999999999999999999999999975 44563         2899999999999999 7899999999999


Q ss_pred             cCC--CC-CCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          106 DGS--GE-HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       106 d~~--G~-~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      |++  |. +++|||++|+|++++++ +.  |.|||+|||+.+
T Consensus        74 Dnsg~G~~~~~Wf~~~V~V~~~~tg-~~--~~Fpc~rWL~~d  112 (696)
T 3fg1_A           74 DGGGYWSGDPDWFVNRVIIISSTQD-RV--YSFPCFRWVIKD  112 (696)
T ss_dssp             CCCCTTCSCCCEEEEEEEEEETTCS-SC--EEEEEEEEESSE
T ss_pred             CCcCCCCCCCCeEeeEEEEEeCCCC-cE--EEeEhhhhccCC
Confidence            999  88 99999999999999877 55  999999999985

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.93  E-value=5.8e-26  Score=206.85  Aligned_cols=100  Identities=19%  Similarity=0.298  Sum_probs=92.0

Q ss_pred             EEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecCC
Q 031460           29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGS  108 (159)
Q Consensus        29 ~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~~  108 (159)
                      .|+|+|+||++++|||||+|+|+|+|++|++... .|+           +||||++|+|.+++++++|+|++|+|+||+.
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~~~-~L~-----------~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~   69 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELG-SCL-----------RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHF   69 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEEEEE-EEE-----------CCCTTCEEEEEEECSSCCCSEEEEEEEEECS
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCccCe-eCC-----------CcCCCCccEEEEEecCCCCcceEEEEEeCCC
Confidence            6999999999999999999999999999998654 352           7999999999999988999999999999999


Q ss_pred             CCCCCeeeeEEEEEeCCC-CCeeeeEEEecccceec
Q 031460          109 GEHHGWYCNYVEVTSTGV-HTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       109 G~~~~W~l~~V~V~~~~~-~~~~~~~~F~~~rWl~~  143 (159)
                      |.+++|||++|+|+++++ + ..  ++|+|++||+.
T Consensus        70 g~~~~Wfl~~V~V~~p~~~g-~~--~~F~Cn~WL~~  102 (662)
T 1lox_A           70 LKEDAWFCNWISVQALGAAE-DK--YWFPCYRWVVG  102 (662)
T ss_dssp             SSCCCEEEEEEEEEESSSCC-CC--EEEEEEEEECS
T ss_pred             CCCCCcEEeEEEEecCCCCC-cE--EEEEeceEecC
Confidence            999999999999999765 5 44  89999999987

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.91  E-value=9.7e-24  Score=180.60  Aligned_cols=114  Identities=12%  Similarity=0.118  Sum_probs=100.3

Q ss_pred             ccccCCCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeC---CCCC
Q 031460           19 IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRG---PCLG   95 (159)
Q Consensus        19 ~~~~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~---~~~l   95 (159)
                      .+...+...-.|+|+|+||+..+|||+++|+|.|+|.+|++.+. .||+|       +++||||++|+|.+..   +.++
T Consensus       247 ~~~~~~~~~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~-~LD~~-------gndFe~G~~d~y~v~~~~~~~~l  318 (370)
T 2wxu_A          247 NDPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNP-------GNDFMTGSKDTYTFKLKDENLKI  318 (370)
T ss_dssp             CCTTSSCCCCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEE-ECCCS-------SCTTCTTCEEEEEEECSCTTCCG
T ss_pred             CCCCCCccceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchh-hhhCc-------CCCcCCCCeeeEEEecCCCccCc
Confidence            43444446788999999999999999999999999999998654 57874       7999999999999999   7899


Q ss_pred             CCcEEEEEEecCC-CCCCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460           96 GPVCALNLSSDGS-GEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus        96 G~i~~I~I~hd~~-G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      |+|..|+|+++.. ++.++|||++|+|+.++ + ..  +.|||+|||.++
T Consensus       319 g~l~~v~l~K~~~~~~~D~Wfc~~i~V~~p~-~-~~--~~FP~y~Wi~g~  364 (370)
T 2wxu_A          319 DDIQNMWIRKRKYTAFPDAYKPENIKIIANG-K-VV--VDKDINEWISGN  364 (370)
T ss_dssp             GGEEEEEEEEECSSSSCCCBCEEEEEEEETT-E-EE--EEEECCSCBCTT
T ss_pred             CceEEEEEEccCCCCCCccceeeeEEEEcCC-C-cE--EEeccceeeeCC
Confidence            9999999999888 88999999999999985 3 44  899999999764

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.90  E-value=1.9e-23  Score=178.76  Aligned_cols=114  Identities=19%  Similarity=0.207  Sum_probs=100.3

Q ss_pred             ccccCCCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeC---CCCC
Q 031460           19 IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRG---PCLG   95 (159)
Q Consensus        19 ~~~~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~---~~~l   95 (159)
                      .+...+...-.|+|+|+||+..+|||+++|+|.|+|++|++.+. .||+|       +++||||++|+|.+..   +.++
T Consensus       247 ~~~~~~~~~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~-~LD~~-------gndFe~G~~d~y~v~~~~~~~dl  318 (370)
T 1olp_A          247 DAVDKDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEW-ALDNP-------GNDFTRNQEGTYTLKLKNKNTKY  318 (370)
T ss_dssp             TCCCCCCCCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEE-ECCCS-------SCCSCTTCEEEEEEECSCSSCCG
T ss_pred             CCCCCCcccceEEEEEEcCCcccCCCcceEEEEEEcCCCccchh-hhhCc-------CCccCCCCeeEEEEeccCCcCCc
Confidence            43444446788999999999999999999999999999998654 57875       6999999999999999   8899


Q ss_pred             CCcEEEEEEecCC-CCCCCeeeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460           96 GPVCALNLSSDGS-GEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus        96 G~i~~I~I~hd~~-G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      |+|..|+|+++.. ++.++|||++|+|+.++ + ..  +.|||+|||.++
T Consensus       319 g~l~~v~l~K~~~~~~~D~Wfc~~i~V~~p~-~-~~--~~FP~y~Wi~g~  364 (370)
T 1olp_A          319 SDIKNMWIRDEKLTVATDGWKPSYVKVIAGD-K-VR--LEKNINEWISGG  364 (370)
T ss_dssp             GGEEEEEEEEECSSSSCCEECEEEEEEEETT-E-EE--EEEECCSCEETT
T ss_pred             CceEEEEEEcCCCCCCCccceeeeEEEEcCC-C-cE--EEeccceeeeCc
Confidence            9999999999887 78899999999999985 3 44  899999999864

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=99.43  E-value=5.8e-13  Score=116.36  Aligned_cols=102  Identities=9%  Similarity=-0.007  Sum_probs=87.5

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE-
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN-  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~-  102 (159)
                      ......|+|+|+|++   ++|+++|+|+|+|++|++.. ..|..         ..|++|++++|.+..+.++|+|.+|+ 
T Consensus       335 Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~-~~l~~---------~~~~~g~~~s~li~~~~dlG~l~~v~~  401 (449)
T 1hpl_A          335 NFARWRYRVDVTLSG---KKVTGHVLVSLFGNKGNSRQ-YEIFQ---------GTLKPDNTYSNEFDSDVEVGDLEKVKF  401 (449)
T ss_dssp             SCCCEEEEEEEEEEE---CCEEEEEEEEEEETTEECCC-EEEEE---------EEECSSCEEEEEEEESSCCCSEEEEEE
T ss_pred             CcccceeEEEEEEcC---CceeEEEEEEEEcCCCCcee-EEecc---------cccCCCcEEEEEEeCCCCCCCceEEEE
Confidence            345778999999997   89999999999999998754 45544         36999999999999888999999999 


Q ss_pred             EEecCCCC--CCCeeeeEEEEEeCCCCCeeeeEEEecccceec
Q 031460          103 LSSDGSGE--HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       103 I~hd~~G~--~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~  143 (159)
                      +||++.+.  .+.|++++|+|++ +++ +.  +.| |++|+-.
T Consensus       402 ~W~~~~~~~~~p~~~i~~I~V~~-e~~-~~--~~f-C~~~~~~  439 (449)
T 1hpl_A          402 IWYNNVINLTLPKVGASKITVER-NDG-SV--FNF-CSEETVR  439 (449)
T ss_dssp             EEEECSCCTTCCCEEEEEEEEEC-TTS-CE--EEE-ECCCCBC
T ss_pred             EEECCCCCCCCCeEEEEEEEEEe-CCC-Ce--eee-cCCCccc
Confidence            79998764  6999999999999 777 54  666 9999865

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=99.40  E-value=2.1e-12  Score=112.57  Aligned_cols=105  Identities=11%  Similarity=0.029  Sum_probs=87.3

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE-
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN-  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~-  102 (159)
                      ......|+|+|+|+.  .++|+++|+|+|+|++|++.. ..|..         ..|++|++++|.+..+.++|+|.+|+ 
T Consensus       336 Pf~~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s~~-~~l~~---------~~~~~g~~~s~li~~~~dlG~l~~v~~  403 (452)
T 1bu8_A          336 NFTRWRYKVSVTLSG--AKKLSGYILVALYGNNGNSKQ-YEIFK---------GSLKPEARHVRDIDVDINVGEIQKVKF  403 (452)
T ss_dssp             TCCCEEEEEEEEEEC--SSCEEEEEEEEEEETTEECCC-EEEEE---------EEECTTCEEEEEEEESSCCCSEEEEEE
T ss_pred             CCcceeeEEEEEEcC--CCceeeEEEEEEEcCCCCcce-EEecc---------cccCCCCEEEEEEeCCCCCCCceEEEE
Confidence            345778999999976  579999999999999998754 45543         35999999999999888999999999 


Q ss_pred             EEecCCCC--CCCeeeeEEEEEeCCCCCeeeeEEEecccceec
Q 031460          103 LSSDGSGE--HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       103 I~hd~~G~--~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~  143 (159)
                      +||++.+.  .+.||+++|+|++.+++ +.  +.|=+++|+..
T Consensus       404 ~W~~~~~~~~~p~~~i~~I~V~~~e~~-~~--~~FC~~~~~~~  443 (452)
T 1bu8_A          404 LWNNKVINLFRPTLGASQITVQSGVDG-KE--YNFCSSDTVRE  443 (452)
T ss_dssp             EEEC------CCCBEEEEEEEEETTTC-CE--EEEECCCCBCT
T ss_pred             EEECCCCCCCCCeEEEEEEEEEeCCCC-Ce--EEecCCCcccc
Confidence            79998764  59999999999998877 55  89999999973

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=99.39  E-value=2.1e-12  Score=112.81  Aligned_cols=104  Identities=13%  Similarity=0.069  Sum_probs=88.5

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE-
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN-  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~-  102 (159)
                      ......|+|+|+|++   ++|++.|+|+|+|++|++.. ..|..         ..|++|++++|.+....++|+|.+|+ 
T Consensus       335 Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~-~~l~~---------~~~~~g~t~s~li~~~~dlG~l~~v~~  401 (450)
T 1rp1_A          335 NFARWRYGVSITLSG---KRATGQAKVALFGSKGNTHQ-FNIFK---------GILKPGSTHSNEFDAKLDVGTIEKVKF  401 (450)
T ss_dssp             CCCCEEEEEEEEEEE---SCEEEEEEEEEEETTEECCC-EEEEE---------EEECTTCEEEEEEEESSCCSSEEEEEE
T ss_pred             CcccceeEEEEEEcC---CceeEEEEEEEEcCCCCcce-EEecc---------cccCCCCEEEEEEECCCCCCCceEEEE
Confidence            345778999999997   89999999999999998753 45544         26999999999999888999999999 


Q ss_pred             EEecCCCC--CCCeeeeEEEEEeCCCCCeeeeEEEecccceec
Q 031460          103 LSSDGSGE--HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       103 I~hd~~G~--~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~  143 (159)
                      +||++.+.  .+.|++++|+|++.+++ +.  +.|=+++|+..
T Consensus       402 ~W~~~~~~~~~p~~~i~~I~V~~~e~~-~~--~~FC~~~~~~~  441 (450)
T 1rp1_A          402 LWNNNVVNPTFPKVGAAKITVQKGEEK-TV--HSFCSESTVRE  441 (450)
T ss_dssp             EEEEC--CTTCCCEEEEEEEEEETTCS-SC--EEEECSCEECT
T ss_pred             EEECCCCCCCCCeEEEEEEEEEeCCCC-Ce--EEecCCCcccc
Confidence            79998764  69999999999998877 55  89999999973

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=99.30  E-value=1.6e-11  Score=106.05  Aligned_cols=101  Identities=8%  Similarity=-0.041  Sum_probs=84.4

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE-
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN-  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~-  102 (159)
                      ......|+|+|+|++   ++|+++|+|+|+|++|++.. ..|..         ..|++|++++|.+..+.++|+|.+|+ 
T Consensus       318 pf~~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s~~-~~l~~---------~~~~~g~~~s~li~~~~~lG~l~~v~~  384 (432)
T 1gpl_A          318 NFTRWRYKVSVTLSG---KKVTGHILVSLFGNKGNSKQ-YEIFK---------GTLKPDSTHSNEFDSDVDVGDLQMVKF  384 (432)
T ss_dssp             TCCCEEEEEEEEEEE---CCEEEEEEEEEEESSCEEEE-EEEEE---------EEECTTCEEEEEEEESSCCCSEEEEEE
T ss_pred             CCccceeEEEEEEcC---CceeEEEEEEEEcCCCCcee-EEecc---------cccCCCcEEEEEEeCCCCCCCceEEEE
Confidence            345778999999997   89999999999999999854 55644         35999999999999888999999999 


Q ss_pred             EEecCCCC--CCCeeeeEEEEEeCCCCCeeeeEEEeccc-cee
Q 031460          103 LSSDGSGE--HHGWYCNYVEVTSTGVHTRCAQQQFTIEQ-WLA  142 (159)
Q Consensus       103 I~hd~~G~--~~~W~l~~V~V~~~~~~~~~~~~~F~~~r-Wl~  142 (159)
                      +||++.+.  .+.|++++|+|++.+++ +    +|-|.+ ++.
T Consensus       385 ~W~~~~~~~~~~~~~i~~I~v~~~e~~-~----~~fC~~~~~~  422 (432)
T 1gpl_A          385 IWYNNVINPTLPRVGASKIIVETNVGK-Q----FNFCSPETVR  422 (432)
T ss_dssp             EEEESSCCTTCCEEEEEEEEEECTTSC-E----EEEECSCCEE
T ss_pred             EEEcCCCCCCCCeEEEEEEEEEeCCCC-C----ceecCCCccc
Confidence            79998764  59999999999998766 2    566764 554

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=99.22  E-value=2.1e-12  Score=112.51  Aligned_cols=105  Identities=12%  Similarity=0.071  Sum_probs=89.8

Q ss_pred             CCCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEE-
Q 031460           24 DSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALN-  102 (159)
Q Consensus        24 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~-  102 (159)
                      ......|+|+|+|+.  .++|+++|+|+|+|++|++.. ..|..         ..|++|++++|.+....++|+|.+|+ 
T Consensus       336 Pf~~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s~~-~~l~~---------~~~~~g~~~s~li~~~~dlG~l~~v~~  403 (452)
T 1w52_X          336 DYTSWRYRVSITLAG--SGKANGYLKVTLRGSNGNSKQ-YEIFK---------GSLQPDSSYTLDVDVNFIIGKIQEVKF  403 (452)
T ss_dssp             TCCCEEEEECCBCCS--SSCCEECBCCCBCCSSCCCCC-CCCCC---------EECCSSCCCCEEEEESSCCCCCCCBCC
T ss_pred             CccceeeEEEEEEcC--CcceeeEEEEEEEcCCCCcce-Eeccc---------cccCCCCEEEEEEECCCCCCCceEEEE
Confidence            345778999999986  579999999999999999854 44533         36999999999999888999999999 


Q ss_pred             EEecCCCC--CCCeeeeEEEEEeCCCCCeeeeEEEecccceec
Q 031460          103 LSSDGSGE--HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLAT  143 (159)
Q Consensus       103 I~hd~~G~--~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~  143 (159)
                      +||++.+.  .+.||+++|+|++.+++ +.  +.|=+++|+..
T Consensus       404 ~W~~~~~~~~~~~~~i~~I~V~~~e~~-~~--~~fC~~~~~~~  443 (452)
T 1w52_X          404 VWNKTVLNLSKPQLGASRITVQSGADG-TE--YKFCGSGTVQD  443 (452)
T ss_dssp             CBCCSSCCSCCCCCCCSBCCCCBSSSC-CC--CCEECCSCCCS
T ss_pred             EEECCCCCCCCCeEEEEEEEEEeCCCC-Ce--EEecCCCcccc
Confidence            79988764  69999999999998777 55  88999999974

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=97.15  E-value=0.0042  Score=58.11  Aligned_cols=86  Identities=14%  Similarity=0.148  Sum_probs=56.4

Q ss_pred             eeEEEEEEC----CCCe--eeeeeccccCCCCCCCCCccccCCeeEEEe--eCCCCCCCcEEEEEEecCCCCCCCeeeeE
Q 031460           47 IIGVTLYDA----VGDG--VRISNLEAWGGLMGPGYNYFERGNLDIFSG--RGPCLGGPVCALNLSSDGSGEHHGWYCNY  118 (159)
Q Consensus        47 ~V~I~L~G~----~G~s--~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i--~~~~~lG~i~~I~I~hd~~G~~~~W~l~~  118 (159)
                      +|.++|+.+    +|..  +....|+.|     ........| ...|.+  ..+.++|++-.|.|....   .+.|||++
T Consensus        55 ~v~lqlvs~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~v~f~~~~~~G~~gav~v~n~~---~~e~fl~~  125 (853)
T 2iuj_A           55 SISIQLISATKADGGKGKVGKATNLRGK-----ITLPTIGAK-EEAYDAQFDWDSDFGIPGAFYIKNYM---QNEFYLKS  125 (853)
T ss_dssp             SEEEEEEEEEEESSSSEEEEEEEECCCC-----CCCSSCCTT-EEEEEEEEECCSSSCCEEEEEEEECS---SSCEEEEE
T ss_pred             eEEEEEEEeeeCCCCCcccCCccccccc-----cCCCCCCCC-ceEEEEEeeccccCCCceEEEEEecC---CccceEeE
Confidence            588888876    2321  123345544     111122333 446877  557789999999997544   37899999


Q ss_pred             EEEEeCCC-CCeeeeEEEecccceeccC
Q 031460          119 VEVTSTGV-HTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus       119 V~V~~~~~-~~~~~~~~F~~~rWl~~d~  145 (159)
                      |+|..... + .   .+||||+|+....
T Consensus       126 i~l~~~p~~g-~---~~F~c~sWv~~~~  149 (853)
T 2iuj_A          126 LILEDIPNHG-T---IHFICNSWVYNSK  149 (853)
T ss_dssp             EEECCCTTSC-C---EEEEEEEEECBTT
T ss_pred             EEEeecCCCC-c---EEEEecccccCCC
Confidence            99987333 4 2   6899999998643

>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}

Probab=83.58  E-value=3.9  Score=38.43  Aligned_cols=54  Identities=15%  Similarity=0.088  Sum_probs=40.5

Q ss_pred             EEEee--CCCCCCCcEEEEEEecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460           86 IFSGR--GPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus        86 ~F~i~--~~~~lG~i~~I~I~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      .|.++  .+.+.|.+=.+.|....   ...+|++.|++.....+ ..  .+|+||.|+....
T Consensus       106 ~~~~~f~~~~~fg~pgA~~v~n~~---~~e~~l~~~~l~~~~~~-~~--~~f~cnswv~~~~  161 (864)
T 2iuk_A          106 AFSIFFEWDASFGIPGAFYIKNFM---TDEFFLVSVKLEDIPNH-GT--IEFVCNSWVYNFR  161 (864)
T ss_dssp             EEEEEECCCSTTCCEEEEEEEECS---SSCEEEEEEEEECCSSS-CC--EEEEEEEEECBGG
T ss_pred             EEEEEEEeeccCCCcceEEEEeCC---CCceEEEEEEEecCCCC-Cc--EEEecCccccCCC
Confidence            45443  45679999999998544   36799999999875543 22  6799999998654

>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...

Probab=80.54  E-value=3.3  Score=38.75  Aligned_cols=54  Identities=9%  Similarity=0.119  Sum_probs=38.0

Q ss_pred             EEEee--CCCCCCCcEEEEEEecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460           86 IFSGR--GPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus        86 ~F~i~--~~~~lG~i~~I~I~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      .|.++  .+.+.|.+=.+.|....   ...+|++.|++.....+ ..  .+|+||.|+....
T Consensus        80 ~~~~~f~~~~~fg~pga~~v~n~~---~~e~~l~~~~l~~~~~~-~~--~~f~cnswv~~~~  135 (839)
T 1f8n_A           80 AFNIHFEWDGSMGIPGAFYIKNYM---QVEFFLKSLTLEAISNQ-GT--IRFVCNSWVYNTK  135 (839)
T ss_dssp             EEEEEEECCGGGCCEEEEEEEECS---SSCEEEEEEEECC-----CC--EEEEEEEEECBGG
T ss_pred             EEEEEEEeccccCCceeEEEEeCC---CCceEEEEEEEecCCCC-Cc--EEEecccccCCCC
Confidence            45433  44579999999998544   36799999999765442 22  6799999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	4e-21
d1olpa2	121	b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domai	3e-15
d1ca1a2	121	b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domai	3e-14
d1bu8a1	114	b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal	5e-07
d1rp1a1	113	b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal	7e-05

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 80.5 bits (198), Expect = 4e-21
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 29  VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
           VY V + TG+    G+ + + + L    G+    S                 R   + F 
Sbjct: 2   VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGSC------------LRPTRNKEEEFK 49

Query: 89  GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
                  G +  + L      +   W+CN++ V + G      +  F   +W+  D
Sbjct: 50  VNVSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQALG--AAEDKYWFPCYRWVVGD 103

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Length = 121

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

 Score = 65.8 bits (160), Expect = 3e-15
 Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 17/132 (12%)

Query: 23  DDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERG 82
            D D     V I+T  +   GTD+ I   +    G       L+  G       N F R 
Sbjct: 2   KDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEW-ALDNPG-------NDFTRN 53

Query: 83  NLDIFSGRGPCLG---GPVCALNLSSDGSGE-HHGWYCNYVEVTSTGVHTRCAQQQFTIE 138
               ++ +          +  + +  +       GW  +YV+V +          +  I 
Sbjct: 54  QEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDKVR----LEKNIN 109

Query: 139 QWLATDTSPYEL 150
           +W++   + Y L
Sbjct: 110 EWISGG-TTYTL 120

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Length = 121

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

 Score = 63.1 bits (153), Expect = 3e-14
 Identities = 16/123 (13%), Positives = 36/123 (29%), Gaps = 16/123 (13%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
              YI T      GTD  +   +    G              M    N F  G+ D ++ 
Sbjct: 9   LVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE--------MDNPGNDFMTGSKDTYTF 60

Query: 90  RGPCLG---GPVCALNLSSDG-SGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT 145
           +          +  + +     +     +    ++V + G           I +W++ ++
Sbjct: 61  KLKDENLKIDDIQNMWIRKRKYTAFPDAYKPENIKVIANGKVV----VDKDINEWISGNS 116

Query: 146 SPY 148
           +  
Sbjct: 117 TYN 119

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.8 bits (103), Expect = 5e-07
 Identities = 8/92 (8%), Positives = 17/92 (18%), Gaps = 12/92 (13%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
           Y V +             I V LY   G+  +                  +     +   
Sbjct: 4   YKVSVTLSG--AKKLSGYILVALYGNNGNSKQYEIF----------KGSLKPEARHVRDI 51

Query: 90  RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV 121
                 G +  +    +    +          
Sbjct: 52  DVDINVGEIQKVKFLWNNKVINLFRPTLGASQ 83

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Length = 113

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 38.0 bits (88), Expect = 7e-05
 Identities = 8/91 (8%), Positives = 22/91 (24%), Gaps = 13/91 (14%)

Query: 30  YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
           Y V I               V L+ + G+  + +  +             + G+      
Sbjct: 4   YGVSITLSG---KRATGQAKVALFGSKGNTHQFNIFKGI----------LKPGSTHSNEF 50

Query: 90  RGPCLGGPVCALNLSSDGSGEHHGWYCNYVE 120
                 G +  +    + +  +  +      
Sbjct: 51  DAKLDVGTIEKVKFLWNNNVVNPTFPKVGAA 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.97
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.97
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.97
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	99.92
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	99.92
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	99.86
d3bnea2	143	Plant lipoxigenase {Soybean (Glycine max), isozyme	91.2

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=7.2e-32  Score=194.29  Aligned_cols=101  Identities=20%  Similarity=0.326  Sum_probs=90.6

Q ss_pred             EEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecCC
Q 031460           29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGS  108 (159)
Q Consensus        29 ~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~~  108 (159)
                      .|+|+|+||++++|||||+|+|+|+|++|.+.. ..|           +.|+||++|+|.+..+.++|+|++|+|+||+.
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s~~-~~l-----------~~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~   69 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVEL-GSC-----------LRPTRNKEEEFKVNVSKYLGSLLFVRLRKKHF   69 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEEEE-EEE-----------ECCCTTCEEEEEEECSSCCCSEEEEEEEEECS
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCCCC-cCc-----------cccccCcEEEEEEEeeccccceEEEEEEECCC
Confidence            699999999999999999999999999998753 333           45999999999999877899999999999999


Q ss_pred             CCCCCeeeeEEEEEeCC-CCCeeeeEEEecccceecc
Q 031460          109 GEHHGWYCNYVEVTSTG-VHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       109 G~~~~W~l~~V~V~~~~-~~~~~~~~~F~~~rWl~~d  144 (159)
                      |..++|||++|+|++++ ++ ..  |.|||+|||.+|
T Consensus        70 g~~~~W~l~~V~V~~~~~~~-~~--~~Fpc~~Wl~~d  103 (111)
T d2p0ma2          70 LKEDAWFCNWISVQALGAAE-DK--YWFPCYRWVVGD  103 (111)
T ss_dssp             SSCCCEEEEEEEEEESSSSC-CC--EEEEEEEEECSS
T ss_pred             CCCCCeEEEEEEEEecCCCC-eE--EEEEcCceECCC
Confidence            99999999999999975 44 44  999999999754

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.97  E-value=2.1e-30  Score=189.58  Aligned_cols=109  Identities=20%  Similarity=0.235  Sum_probs=93.8

Q ss_pred             CCCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCC---CCCCcEEE
Q 031460           25 SDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPC---LGGPVCAL  101 (159)
Q Consensus        25 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~---~lG~i~~I  101 (159)
                      .+...|.|+|+||++++|||||+|+|+|+|++|++.. ..|++      + ++.||||++|+|.+..++   .+|+|.+|
T Consensus         4 ~~~~~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~s~~-~~L~~------~-~~~Ferg~~d~F~v~~~d~~~~lG~i~~i   75 (121)
T d1olpa2           4 YDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEE-WALDN------P-GNDFTRNQEGTYTLKLKNKNTKYSDIKNM   75 (121)
T ss_dssp             CCCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEE-EECCC------S-SCCSCTTCEEEEEEECSCSSCCGGGEEEE
T ss_pred             ccccEEEEEEEECCCCCCCCcceEEEEEEECCCCccc-EEecC------C-CcccccCCeEEEEEEeCCccCCcCceEEE
Confidence            4577899999999999999999999999999998754 46765      3 578999999999999764   59999999


Q ss_pred             EEEecCCCC-CCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460          102 NLSSDGSGE-HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus       102 ~I~hd~~G~-~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      +|+||+.|. .++|||++|+|... ++ +.  |.|||+|||..++
T Consensus        76 ~i~hd~~g~~~~~W~l~~V~v~~~-~~-~~--~~F~~nrWl~~~~  116 (121)
T d1olpa2          76 WIRDEKLTVATDGWKPSYVKVIAG-DK-VR--LEKNINEWISGGT  116 (121)
T ss_dssp             EEEEECSSSSCCEECEEEEEEEET-TE-EE--EEEECCSCEETTE
T ss_pred             EEEEcCCCCCCcceeEEEEEEECC-CC-eE--EEEECCEEECCCc
Confidence            999999886 45699999999765 34 44  9999999998864

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.97  E-value=8.9e-30  Score=186.23  Aligned_cols=108  Identities=14%  Similarity=0.162  Sum_probs=93.6

Q ss_pred             CCeEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCC---CCCCcEEEE
Q 031460           26 DDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPC---LGGPVCALN  102 (159)
Q Consensus        26 ~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~---~lG~i~~I~  102 (159)
                      +...|.|+|+||++++|||||+|+|+|+|++|.+.. ..|++      | .+.||||++|+|.+.+++   ++|+|.+|+
T Consensus         5 ~~~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~s~~-~~L~~------~-~~~Ferg~~d~F~v~~~d~~~~lG~i~ki~   76 (121)
T d1ca1a2           5 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQE-WEMDN------P-GNDFMTGSKDTYTFKLKDENLKIDDIQNMW   76 (121)
T ss_dssp             CCCEEEEEEEECCSTTCCCCSEEEEEEEETTSCEEE-EECCC------S-SSCSCTTCEEEEEEECSCSSCCGGGEEEEE
T ss_pred             cceeEEEEEEeCCCCCCCCCCeEEEEEEeCCCCeee-EEecC------C-CccccCCcEEEEEEEeCCcCCCcCCceEEE
Confidence            367899999999999999999999999999998754 56765      4 578999999999999864   499999999


Q ss_pred             EEecCCCC-CCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460          103 LSSDGSGE-HHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus       103 I~hd~~G~-~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      |+||+.|. .++|||++|+|... ++ +.  |.|+|||||+.++
T Consensus        77 i~hd~~g~~~~~W~l~~V~v~~~-~~-~~--~~F~~nrWl~~~~  116 (121)
T d1ca1a2          77 IRKRKYTAFPDAYKPENIKVIAN-GK-VV--VDKDINEWISGNS  116 (121)
T ss_dssp             EEEECSSSSCCCBCEEEEEEEET-TE-EE--EEEECCSCBCSSC
T ss_pred             EEEcCccccCchhheEEEEEECC-CC-eE--EEeECCEEECCCC
Confidence            99999986 56799999999764 44 44  9999999998875

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.92  E-value=9e-26  Score=162.72  Aligned_cols=101  Identities=13%  Similarity=0.085  Sum_probs=88.2

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      ..|+|+|+||   +|||||+|+|+|+|++|++.. ..|.         .+.||||++|+|.++++.++|+|.+|+|+||+
T Consensus         2 ~rY~V~V~t~---gagT~a~v~i~L~G~~g~t~~-~~l~---------~~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn   68 (113)
T d1rp1a1           2 WRYGVSITLS---GKRATGQAKVALFGSKGNTHQ-FNIF---------KGILKPGSTHSNEFDAKLDVGTIEKVKFLWNN   68 (113)
T ss_dssp             EEEEEEEEEE---ESCEEEEEEEEEEETTEECCC-EEEE---------EEEECTTCEEEEEEEESSCCSSEEEEEEEEEE
T ss_pred             eEEEEEEEEC---CCCccceEEEEEEcCCCCccc-EEEc---------ceeEcCCCEEEEEEEeCCCCCCcEEEEEEECC
Confidence            5899999998   699999999999999998754 5564         36799999999999988789999999999999


Q ss_pred             CCCCCCe---eeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          108 SGEHHGW---YCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       108 ~G~~~~W---~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      .|.+++|   |+++|+|++..++ ..  +.|.+++|+..+
T Consensus        69 ~g~~~~w~~~~v~~V~V~~~~~g-~~--~~Fc~~~~v~~~  105 (113)
T d1rp1a1          69 NVVNPTFPKVGAAKITVQKGEEK-TV--HSFCSESTVRED  105 (113)
T ss_dssp             C--CTTCCCEEEEEEEEEETTCS-SC---EEECSCEECTT
T ss_pred             CCCCCccccceeEEEEEEcCCCC-cE--EEECcCceEccC
Confidence            9999999   9999999999887 55  999999999875

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.4e-25  Score=160.46  Aligned_cols=102  Identities=12%  Similarity=-0.003  Sum_probs=85.3

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      ..|+|+|+||+.  +||+|+|+|+|+|++|++. ...|.         .+.|+||++|+|.++++.++|+|.+|+|+||+
T Consensus         2 ~rY~V~V~t~~~--~gT~~~V~i~L~G~~G~s~-~~~l~---------~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn   69 (114)
T d1bu8a1           2 WRYKVSVTLSGA--KKLSGYILVALYGNNGNSK-QYEIF---------KGSLKPEARHVRDIDVDINVGEIQKVKFLWNN   69 (114)
T ss_dssp             EEEEEEEEEECS--SCEEEEEEEEEEETTEECC-CEEEE---------EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC
T ss_pred             cEEEEEEEECCC--CCcCceEEEEEEeCCCCcc-cCccc---------hhhccCCCceEEEEecCcCCCCcEEEEEEECC
Confidence            589999999976  5999999999999999875 45564         36799999999999998789999999999999


Q ss_pred             CCCCCCe---eeeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          108 SGEHHGW---YCNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       108 ~G~~~~W---~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      +|.+++|   |+++|+|++..++ +.  |.|.+++|+..+
T Consensus        70 ~g~~~~W~~~~l~~V~V~~~~~g-~~--~~Fc~~~~v~~~  106 (114)
T d1bu8a1          70 KVINLFRPTLGASQITVQSGVDG-KE--YNFCSSDTVRED  106 (114)
T ss_dssp             ------CCCBEEEEEEEEETTTC-CE--EEEECCCCBCTT
T ss_pred             CcCCCcccccceEEEEEEeCCCC-CE--EEEecCceEcCC
Confidence            9999999   5999999999887 55  999999998765

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.86  E-value=7.8e-22  Score=142.01  Aligned_cols=99  Identities=9%  Similarity=-0.004  Sum_probs=86.2

Q ss_pred             eEEEEEEEcCCCCCCCCCeeeEEEEEECCCCeeeeeeccccCCCCCCCCCccccCCeeEEEeeCCCCCCCcEEEEEEecC
Q 031460           28 CVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDG  107 (159)
Q Consensus        28 ~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~s~~~~~Ld~~~~~~~p~~~~Fergs~D~F~i~~~~~lG~i~~I~I~hd~  107 (159)
                      ..|+|+|+|+   ++||+|+|+|.|+|++|++.. ..|.+         +.|+||++|+|.+.++.++|+|.+|++||||
T Consensus         2 ~rY~V~V~t~---g~~T~~~V~i~L~G~~G~s~~-~~L~~---------~~f~~g~t~tf~i~~~~~lG~l~~v~~~hdn   68 (112)
T d1gpla1           2 WRYKVSVTLS---GKKVTGHILVSLFGNKGNSKQ-YEIFK---------GTLKPDSTHSNEFDSDVDVGDLQMVKFIWYN   68 (112)
T ss_dssp             EEEEEEEEEE---ECCEEEEEEEEEEESSCEEEE-EEEEE---------EEECTTCEEEEEEEESSCCCSEEEEEEEEEE
T ss_pred             cEEEEEEEEc---CCCccceEEEEEEECCCCccc-EEEcC---------ccccCCCEEEEEEEeCCCCCCcEEEEEEECC
Confidence            5899999997   689999999999999998754 55643         5799999999999998889999999999999


Q ss_pred             CCCCCCee---eeEEEEEeCCCCCeeeeEEEecccceecc
Q 031460          108 SGEHHGWY---CNYVEVTSTGVHTRCAQQQFTIEQWLATD  144 (159)
Q Consensus       108 ~G~~~~W~---l~~V~V~~~~~~~~~~~~~F~~~rWl~~d  144 (159)
                      +|.+|+|+   +++|.|+..+ + +.  |.| |.++.-..
T Consensus        69 sg~~~~w~~~~~~~I~V~~g~-g-~~--~~F-C~~~~v~~  103 (112)
T d1gpla1          69 NVINPTLPRVGASKIIVETNV-G-KQ--FNF-CSPETVRE  103 (112)
T ss_dssp             SSCCTTCCEEEEEEEEEECTT-S-CE--EEE-ECSCCEET
T ss_pred             CCCCCCcccccCEEEEEECCC-C-eE--EEe-cCcccccC
Confidence            99999999   8999998763 4 44  788 99998554

>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: Plant lipoxigenase
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=91.20  E-value=0.3  Score=34.59  Aligned_cols=56  Identities=9%  Similarity=0.101  Sum_probs=38.7

Q ss_pred             eeEEEee--CCCCCCCcEEEEEEecCCCCCCCeeeeEEEEEeCCCCCeeeeEEEecccceeccC
Q 031460           84 LDIFSGR--GPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT  145 (159)
Q Consensus        84 ~D~F~i~--~~~~lG~i~~I~I~hd~~G~~~~W~l~~V~V~~~~~~~~~~~~~F~~~rWl~~d~  145 (159)
                      ...|.++  -+.+.|.+=.|.|...-   ..--|++.|++.....+ ..  .+|+||.|+....
T Consensus        72 ~~~y~v~F~vd~~fG~PGAi~V~N~h---~~EffL~sitle~~p~~-g~--vhF~CNSWVyp~~  129 (143)
T d3bnea2          72 ESAFNIHFEWDGSMGIPGAFYIKNYM---QVEFFLKSLTLEAISNQ-GT--IRFVCNSWVYNTK  129 (143)
T ss_dssp             CEEEEEEECCCGGGCCEEEEEEEECS---SSCEEEEEEEECCC-----C--EEEEEEEEECBGG
T ss_pred             cEEEEEEEEecccCCCccEEEEEecC---CccEEEEEEEEecCCCC-cC--EEEeCCCcEeECC
Confidence            3455543  34569999999997543   36789999999865332 23  7999999998644