Citrus Sinensis ID: 031501

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF
Secondary Structure (PSIPRED)
ccEEEEEccccEEEHHHHHHHHccccccEEEEccEEEEEEcccccccccccccccEEEEcccccccccEEccccEEEcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccEEEHHHHHHHEcccccEEEEEcccEEEEEccccccccccccccccHHHHccccccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccEEEEEc
Coil and Loop (DISEMBL)
meqirrssyhdvirvSEIQKVLDISGVQTYVINSARVVFlnerpqprpgkgvtntcevcdrslldsfrfcslgckivgtsknfqkrknrlamgsdsedsysssihgklknrdfssnnnnkmqsfspstppptavSHRISkrrkgiphrapmggllief
Flexible Loop (DISEMBL)
meqirrssyhdvirvseiqkvldisgVQTYVINSARVVflnerpqprpgkgvtntCEVCDRSLLDSFRFCSLGCkivgtsknfqkrknrlamgsdsedsysssIHGKLKNRDFSSNNNNKMqsfspstppptAVSHRiskrrkgiphrapmggllief
Low Complexity Region (SEG)
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGsdsedsysssIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF
Disordered region (IsUnstruct)
********YHDVIRVSEIQKVLDISGVQTYVINSARVVFLNE*******KGVTNTCEVCDRSLLDSFRFCSLGCKIVGTS******************************************************************************
Disordered Region (DISOPRED)
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVV*******************VCDRSLLDSFRFCSLGCK***********************************************************************HRAPMGGLLIEF
Disordered Region (DISEMBL)
*********HDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRK*****************HGKLKNRDFSSNNNNK***********************GIPHRAPMGGLLIEF
Disordered Region (DISPRO)
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPR****VTNTCEVCDRSLLDSFRFCSLGCKIVGTSK***************************************************************IPHRAPMGGLLIEF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	158	2.2.26 [Sep-21-2011]
P0CB19	110	Uncharacterized protein A	no	no	0.658	0.945	0.251	0.0004

>sp|P0CB19|Y3081_ARATH Uncharacterized protein At3g50808 OS=Arabidopsis thaliana GN=At3g50808 PE=4 SV=1

 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 35/139 (25%)

Query: 18  IQKVLDISGVQTYVINSARVVFLNER---PQPRPGKGVTNTCEVCDRSL--LDSFRFCSL 72
           + + +DISG+  Y IN   +V++N+R      R    V + C++C+  +    S  FCS+
Sbjct: 1   MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60

Query: 73  GCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQSFSPSTPPPT 132
            CK             R  +GS  ++                  N++++   S     P 
Sbjct: 61  ECKF------------RSVLGSQLDELME---------------NSSEVTEISEEIDEPV 93

Query: 133 AVSHRISKRRKGIPHRAPM 151
               +   RRKG PHRAP 
Sbjct: 94  M---KKRHRRKGSPHRAPF 109

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
388512305	215	unknown [Lotus japonicus]	0.987	0.725	0.810	2e-64
110681464	233	putative zinc-binding protein [Platanus	0.930	0.630	0.788	4e-63
255573491	223	protein with unknown function [Ricinus c	0.968	0.686	0.805	9e-62
217072374	240	unknown [Medicago truncatula] gi|3885098	0.936	0.616	0.765	1e-61
357485195	240	hypothetical protein MTR_5g030130 [Medic	0.936	0.616	0.759	2e-61
356526711	325	PREDICTED: uncharacterized protein LOC10	0.905	0.44	0.765	4e-61
449436818	220	PREDICTED: uncharacterized protein LOC10	0.968	0.695	0.737	2e-59
383932350	214	PLATZ [Gossypium hirsutum]	0.930	0.686	0.796	2e-59
356496400	236	PREDICTED: uncharacterized protein LOC10	0.936	0.627	0.753	6e-59
147833550	244	hypothetical protein VITISV_016796 [Viti	0.936	0.606	0.778	6e-59

>gi|388512305|gb|AFK44214.1| unknown [Lotus japonicus]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/158 (81%), Positives = 144/158 (91%), Gaps = 2/158 (1%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 58  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 117

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKN-RLAMGSDSEDSYSS-SIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTSKNF+K+K   +AM SDSEDSYSS S HG+    +  +NNNNK
Sbjct: 118 LLDSFRFCSLGCKIVGTSKNFEKKKKLSVAMASDSEDSYSSNSNHGRKNIHNNHNNNNNK 177

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           +QSFSPSTPPPT+V++R +KRRKGIPHRAPM GL+IE+
Sbjct: 178 VQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMVGLVIEY 215

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110681464|emb|CAL25342.1| putative zinc-binding protein [Platanus x acerifolia]

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 123/156 (78%), Positives = 134/156 (85%), Gaps = 9/156 (5%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 87  QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCERS 146

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQ 122
           LLDSFRFCSLGCKIVGTSKN+QK+K   A  SDSE+SYS         R  +S    K+Q
Sbjct: 147 LLDSFRFCSLGCKIVGTSKNYQKKKRSQATTSDSEESYS--------GRSLAS-EKIKVQ 197

Query: 123 SFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           SF+PSTPPPT V++R +KRRKGIPHRAPMGGL+IEF
Sbjct: 198 SFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGLIIEF 233

Source: Platanus x acerifolia

Species: Platanus x acerifolia

Genus: Platanus

Family: Platanaceae

Order: Proteales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573491|ref|XP_002527671.1| protein with unknown function [Ricinus communis] gi|223532976|gb|EEF34742.1| protein with unknown function [Ricinus communis]

 Score =  241 bits (614), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 128/159 (80%), Positives = 143/159 (89%), Gaps = 6/159 (3%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 67  QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCERS 126

Query: 63  LLDSFRFCSLGCKIVGTSKNFQ-KRKNRLAM--GSDSEDSYSSSIHGKLKNRDFSSNNNN 119
           LLDSFRFCSLGCKIVGTSKNFQ K+K + AM   S+   SYSSS HG+ KN +   ++++
Sbjct: 127 LLDSFRFCSLGCKIVGTSKNFQRKKKQQTAMMSDSEDSYSYSSSSHGQYKNHN---DDDH 183

Query: 120 KMQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           K+QSFSPSTPPPT+VS+R +KRRKGIPHRAPMGGL+IEF
Sbjct: 184 KVQSFSPSTPPPTSVSYRSAKRRKGIPHRAPMGGLIIEF 222

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072374|gb|ACJ84547.1| unknown [Medicago truncatula] gi|388509820|gb|AFK42976.1| unknown [Medicago truncatula]

 Score =  240 bits (613), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/158 (76%), Positives = 138/158 (87%), Gaps = 10/158 (6%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRV+EIQK LDI+GVQTYVINSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 88  QIRRSSYHDVIRVNEIQKHLDIAGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCERS 147

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRL-AMGSDSEDSYSS-SIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTSKNFQK+K  L AM SDSE+SYSS +IH + K          K
Sbjct: 148 LLDSFRFCSLGCKIVGTSKNFQKKKRHLTAMASDSEESYSSNNIHSRQKKI--------K 199

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           +QSF+PSTPPPT+V++R +KRRKGIPHRAP+GGL +++
Sbjct: 200 VQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLDVDY 237

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485195|ref|XP_003612885.1| hypothetical protein MTR_5g030130 [Medicago truncatula] gi|355514220|gb|AES95843.1| hypothetical protein MTR_5g030130 [Medicago truncatula]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/158 (75%), Positives = 138/158 (87%), Gaps = 10/158 (6%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRV+EIQK LDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 88  QIRRSSYHDVIRVNEIQKHLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 147

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRL-AMGSDSEDSYSS-SIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTSKNFQK+K  L AM SDSE+SYSS +IH + K          K
Sbjct: 148 LLDSFRFCSLGCKIVGTSKNFQKKKRHLTAMASDSEESYSSNNIHSRQKKI--------K 199

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           +QSF+PSTPPPT+V++R +KRRKGIPHRAP+GGL +++
Sbjct: 200 VQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLDVDY 237

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526711|ref|XP_003531960.1| PREDICTED: uncharacterized protein LOC100784644 [Glycine max]

 Score =  238 bits (608), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/158 (76%), Positives = 136/158 (86%), Gaps = 15/158 (9%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRV+EIQKVLDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 181 QIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 240

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSED--SYSSSIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTS+NFQK+K   AMGSD+ED    S+S HGK KN          
Sbjct: 241 LLDSFRFCSLGCKIVGTSRNFQKKKKSAAMGSDTEDSSYSSNSSHGK-KN---------- 289

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
             SF+PSTPPPT+V++R +KRRKGIPHRAPMGGL+IE+
Sbjct: 290 --SFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436818|ref|XP_004136189.1| PREDICTED: uncharacterized protein LOC101209912 [Cucumis sativus] gi|449534353|ref|XP_004174127.1| PREDICTED: uncharacterized protein LOC101231296 [Cucumis sativus]

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 115/156 (73%), Positives = 134/156 (85%), Gaps = 3/156 (1%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 68  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 127

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQ 122
           LLDSFRFCSLGCKIVGTSKN++K++  +   S+     S+S  G++     +SN N  +Q
Sbjct: 128 LLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSQGRIMK---NSNKNRVVQ 184

Query: 123 SFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           SF+PSTPPPT VS+R +KRRKGIPHRAPMGGL+IE+
Sbjct: 185 SFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383932350|gb|AFH57272.1| PLATZ [Gossypium hirsutum]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/157 (79%), Positives = 139/157 (88%), Gaps = 10/157 (6%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDV RVSEIQK LDISGVQTYVINSA+VVF+NERPQPRPGKGVTNTCEVCDRS
Sbjct: 67  QIRRSSYHDVTRVSEIQKYLDISGVQTYVINSAKVVFINERPQPRPGKGVTNTCEVCDRS 126

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNRL-AMGSDSEDSYSSSIHGKLKNRDFSSNNNNKM 121
           L+DSFRFCSLGCKIVGTSK+FQK+K  + AM SDSEDSYSSS HGKL         NNK+
Sbjct: 127 LVDSFRFCSLGCKIVGTSKDFQKKKRHMAAMASDSEDSYSSSGHGKL---------NNKV 177

Query: 122 QSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           QSF PSTPPPT+V++R +KRRKGIPHRAPMGGL+I++
Sbjct: 178 QSFRPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIQY 214

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496400|ref|XP_003517056.1| PREDICTED: uncharacterized protein LOC100797900 [Glycine max]

 Score =  231 bits (590), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 119/158 (75%), Positives = 135/158 (85%), Gaps = 10/158 (6%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 87  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 146

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNR-LAM-GSDSEDSYSSSIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTSKNFQKRK + +AM     +   S+S+HG  K        N K
Sbjct: 147 LLDSFRFCSLGCKIVGTSKNFQKRKKQSMAMSSDSEDSYSSNSVHGLKK--------NCK 198

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           +QSF+PSTPPPT+V++R +KRRKGIPHRAPM GL+IE+
Sbjct: 199 VQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMVGLIIEY 236

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833550|emb|CAN63851.1| hypothetical protein VITISV_016796 [Vitis vinifera]

 Score =  231 bits (590), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/158 (77%), Positives = 137/158 (86%), Gaps = 10/158 (6%)

Query: 3   QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
           QIRRSSYHDVIRVSEIQKVLDI+GVQTY+INSARVVFLNERPQPRPGKGVTNTCEVC+RS
Sbjct: 94  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 153

Query: 63  LLDSFRFCSLGCKIVGTSKNFQKRKNR--LAMGSDSEDSYSSSIHGKLKNRDFSSNNNNK 120
           LLDSFRFCSLGCKIVGTS NFQK+K++      SDSE+SYSSS HG+           N 
Sbjct: 154 LLDSFRFCSLGCKIVGTSTNFQKKKHQQPATASSDSEESYSSSSHGR--------QAQNA 205

Query: 121 MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
           +QSFSPSTPPPTAV++R +KRRKGIPHRAPMGGL+IE+
Sbjct: 206 VQSFSPSTPPPTAVNYRTAKRRKGIPHRAPMGGLIIEY 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
TAIR|locus:2035614	213	AT1G32700 [Arabidopsis thalian	0.936	0.694	0.681	4.1e-49
TAIR|locus:2141070	227	AT4G17900 [Arabidopsis thalian	0.879	0.612	0.664	2.7e-45
TAIR|locus:2011721	245	AT1G76590 [Arabidopsis thalian	0.506	0.326	0.787	3.2e-39
TAIR|locus:2037405	246	AT1G21000 [Arabidopsis thalian	0.481	0.308	0.802	4e-39
TAIR|locus:2178580	226	AT5G46710 [Arabidopsis thalian	0.892	0.623	0.529	1.1e-34
TAIR|locus:2009879	216	AT1G43000 [Arabidopsis thalian	0.936	0.685	0.448	1e-27
TAIR|locus:2057867	189	AT2G27930 [Arabidopsis thalian	0.556	0.465	0.618	1.1e-25
TAIR|locus:1009023224	256	AT2G12646 "AT2G12646" [Arabido	0.518	0.320	0.512	4.3e-23
TAIR|locus:2015761	243	AT1G31040 [Arabidopsis thalian	0.462	0.300	0.527	6e-22
TAIR|locus:2101881	245	AT3G60670 [Arabidopsis thalian	0.468	0.302	0.527	1.3e-18

TAIR|locus:2035614 AT1G32700 [Arabidopsis thaliana (taxid:3702)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 107/157 (68%), Positives = 119/157 (75%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRRSSYHDVIRVSEIQK LDI+GVQTYVINSA+VVFLNERPQPRPGKGV NTCEVC RS
Sbjct:    65 QIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRS 124

Query:    63 LLDSFRFCSLGCKIVGTSKNFQKR-KNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
             L+DSFRFCSLGCKI G SK  +K   N L+              G+LK  D   NN    
Sbjct:   125 LVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSI---GRLKKNDDIMNN---- 177

Query:   122 QSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
              SF+PSTPP +AV+ RI+KRRKGIPHRAP GGL+IE+
Sbjct:   178 -SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2141070 AT4G17900 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 101/152 (66%), Positives = 112/152 (73%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRRSSYHDVIRV+EIQK LDI G+QTYVINSA+VVFLNERPQPRPGKGVTNTC+VC RS
Sbjct:    87 QIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRS 146

Query:    63 LLD-SFRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
             L+D SFRFCSLGCKI GTS+ F+K +  L M             GK         N   +
Sbjct:   147 LVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAI--GK---------NITNL 195

Query:   122 QSFSPSTPPPTAVSH-RISKRRKGIPHRAPMG 152
             QSFSPSTPP T  S+ RI KRRKGIPHR+PMG
Sbjct:   196 QSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011721 AT1G76590 [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
 Identities = 63/80 (78%), Positives = 73/80 (91%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRRSSYH+V+RV+EIQK +DIS VQTY+INSAR+VFLNERPQPR GKGVTNTCE+C RS
Sbjct:    71 QIRRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRS 130

Query:    63 LLDSFRFCSLGCKIVGTSKN 82
             LLDSFRFCSLGCK+ G  ++
Sbjct:   131 LLDSFRFCSLGCKLGGMKRD 150

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2037405 AT1G21000 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
 Identities = 61/76 (80%), Positives = 71/76 (93%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRRSSYH+V+RV+EIQK +DI+ VQTY+INSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct:    69 QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128

Query:    63 LLDSFRFCSLGCKIVG 78
             LLDSFRFCSLGCK+ G
Sbjct:   129 LLDSFRFCSLGCKLGG 144

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2178580 AT5G46710 [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 80/151 (52%), Positives = 97/151 (64%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIR SSYH+V +V EIQK LDIS +QTYVINS++V+FLNERPQ +PGKG TN C VC R 
Sbjct:    81 QIRISSYHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKGFTNACMVCYRG 140

Query:    63 LLDS-FRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
             L ++ FRFCS+GCK+ GTS  FQKR                   G   N   + N N+ +
Sbjct:   141 LAENCFRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSS----GVENNSSGAENGNSNL 196

Query:   122 QSFSPSTP--PPTAVSHRISKRRKGIPHRAP 150
             QS SP TP  PP ++  R+   RKGIPHRAP
Sbjct:   197 QSLSPPTPQFPPRSLRKRL---RKGIPHRAP 224

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009879 AT1G43000 [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 69/154 (44%), Positives = 91/154 (59%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRRSSYH+V+RVSEIQK +DIS +QTYVINSA++ FLN RPQ R GK +  TC++C R+
Sbjct:    62 QIRRSSYHNVVRVSEIQKHIDISCIQTYVINSAKIFFLNARPQCRTGKSLNKTCQICSRN 121

Query:    63 LLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXX--XXIHGKLKNRDFSSNNNNK 120
             LLDSF FCSL CK+ G              G            I  +L +    + ++ +
Sbjct:   122 LLDSFLFCSLACKLEGVKNGEDPNLTLFHSGKSDDSSKIINTGICSRLIDGISIAVDDQR 181

Query:   121 MQSFSPSTPP-PTAVSHR---ISKRRKGIPHRAP 150
              ++    +P  P+  SHR   +  RRKGIP RAP
Sbjct:   182 SETAGVLSPETPSIESHRNYPMKSRRKGIPQRAP 215

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057867 AT2G27930 [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 60/97 (61%), Positives = 71/97 (73%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGK-GVTNT------ 55
             QIRRSSYHDV+RVSEI+  LDI GVQTYVINSARV+FLNERPQP+    G  ++      
Sbjct:    58 QIRRSSYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMS 117

Query:    56 --CEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRKNRL 90
               CE C R+LLD FRFCSLGCK+ G  KN ++ + RL
Sbjct:   118 YFCETCCRTLLDPFRFCSLGCKVEGMRKNKEEEEERL 154

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1009023224 AT2G12646 "AT2G12646" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
 Identities = 42/82 (51%), Positives = 57/82 (69%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             Q+RR  YHDV+R+ ++QK++D S VQ Y INSA+VVF+ +RPQ R  KG  N C  CDRS
Sbjct:    58 QVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRS 117

Query:    63 LLDSFRFCSLGCKIVGTSKNFQ 84
             L + +  CSLGCK+    K ++
Sbjct:   118 LQEPYIHCSLGCKVDFVMKRYR 139

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2015761 AT1G31040 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
 Identities = 39/74 (52%), Positives = 53/74 (71%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             Q+RR  YHDV+R+S+++K++D S VQ Y IN A+V+FLN+R Q R  K  +N C  CDR 
Sbjct:    71 QVRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR-AKVSSNVCFTCDRI 129

Query:    63 LLDSFRFCSLGCKI 76
             L + F FCSL CK+
Sbjct:   130 LQEPFHFCSLSCKV 143

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2101881 AT3G60670 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 39/74 (52%), Positives = 49/74 (66%)

Query:     3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
             QIRR  Y DV+RV +  K++D S +Q Y  NS++VVF+NERPQ R  +G  N C  CDRS
Sbjct:    59 QIRRYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRS 118

Query:    63 LLDSFRFCSLGCKI 76
             L   + FC L CKI
Sbjct:   119 LQSPYLFCCLSCKI 132

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	158
pfam04640	72	pfam04640, PLATZ, PLATZ transcription factor	6e-47

>gnl|CDD|191051 pfam04640, PLATZ, PLATZ transcription factor

 Score =  146 bits (371), Expect = 6e-47
 Identities = 60/72 (83%), Positives = 66/72 (91%)

Query: 5  RRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLL 64
          RRSSYHDV+RVS+IQK++DISGVQTYVINSA+VVFLNERPQ RPGKG  N CE CDRSLL
Sbjct: 1  RRSSYHDVVRVSDIQKLIDISGVQTYVINSAKVVFLNERPQSRPGKGSGNICETCDRSLL 60

Query: 65 DSFRFCSLGCKI 76
          D FRFCSLGCK+
Sbjct: 61 DPFRFCSLGCKV 72

Plant AT-rich sequence and zinc-binding proteins (PLATZ) are zinc dependant DNA binding proteins. They bind to AT rich sequences and functions in transcriptional repression. Length = 72

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	158
PF04640	72	PLATZ: PLATZ transcription factor; InterPro: IPR00	100.0
PF12855	43	Ecl1: Life-span regulatory factor; InterPro: IPR02	92.34
PRK01343	57	zinc-binding protein; Provisional	91.24
PRK00418	62	DNA gyrase inhibitor; Reviewed	89.38
COG3024	65	Uncharacterized protein conserved in bacteria [Fun	88.68
PF03884	57	DUF329: Domain of unknown function (DUF329); Inter	88.58
PF10013	42	DUF2256: Uncharacterized protein conserved in bact	82.19

>PF04640 PLATZ: PLATZ transcription factor; InterPro: IPR006734 This family includes a conserved region in several uncharacterised plant proteins

Probab=100.00  E-value=1.5e-42  Score=246.34  Aligned_cols=72  Identities=72%  Similarity=1.223  Sum_probs=71.1

Q ss_pred             EeecccceeecchhhhhhccCCceEEEECCceEEEecCCCCCCCCCCCCCccccccccccCCCeeeccccee
Q 031501            5 RRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSFRFCSLGCKI   76 (158)
Q Consensus         5 RRssY~dVVrv~diqkllDiS~IQtYvINsakVVFLn~RPq~r~~~g~~~~C~~C~R~L~d~~~FCSL~CKv   76 (158)
                      |||||||||||+|||||||||+||||+||+++|||||+|||+++.++.++.|++|+|+|+|+|+||||+|||
T Consensus         1 Rr~sY~dVVrv~di~kl~D~s~IQtY~iNs~kVVfLn~Rpq~~~~~~~~~~C~~C~R~L~d~~~fCSl~CKv   72 (72)
T PF04640_consen    1 RRYSYHDVVRVSDIQKLLDCSGIQTYVINSAKVVFLNPRPQSRPSKGSGNICETCHRSLQDPYRFCSLSCKV   72 (72)
T ss_pred             CcccccceEEHHHhHhhccccccEEEEeCCceEEEEccCCcCCCCCCCCCccCCCCCCCCCCCeEEeeeEEC
Confidence            899999999999999999999999999999999999999999999999999999999999999999999996

>PF12855 Ecl1: Life-span regulatory factor; InterPro: IPR024368 The fungal proteins in this entry are involved in the regulation of chronological life-span [, ]

Probab=92.34  E-value=0.027  Score=36.72  Aligned_cols=30  Identities=30%  Similarity=0.723  Sum_probs=25.1

Q ss_pred             CCCccccccccc---cCCCeeecccceeeccch
Q 031501           52 VTNTCEVCDRSL---LDSFRFCSLGCKIVGTSK   81 (158)
Q Consensus        52 ~~~~C~~C~R~L---~d~~~FCSL~CKv~~~~~   81 (158)
                      ..+.|.+|++-+   .+...|||-+|++.+..+
T Consensus         5 F~~yC~~Cdk~~~~~~~~~lYCSe~Cr~~D~~~   37 (43)
T PF12855_consen    5 FNDYCIVCDKQIDPPDDGSLYCSEECRLKDQEK   37 (43)
T ss_pred             hhhHHHHhhccccCCCCCccccCHHHHhHhhhc
Confidence            347899999999   668999999999976554

Overexpression of these proteins has been shown to extend the chronological life-span of wild-type strains. The mechanism by which this happens is not known, but microarray data suggests that they may function as pleiptropic stress regulators.

>PRK01343 zinc-binding protein; Provisional

Probab=91.24  E-value=0.079  Score=36.59  Aligned_cols=29  Identities=24%  Similarity=0.607  Sum_probs=23.7

Q ss_pred             CCccccccccccCCC-eeecccceeeccch
Q 031501           53 TNTCEVCDRSLLDSF-RFCSLGCKIVGTSK   81 (158)
Q Consensus        53 ~~~C~~C~R~L~d~~-~FCSL~CKv~~~~~   81 (158)
                      ...|-+|++.....| -|||-.|+..+..+
T Consensus         9 ~~~CP~C~k~~~~~~rPFCS~RC~~iDLg~   38 (57)
T PRK01343          9 TRPCPECGKPSTREAYPFCSERCRDIDLNR   38 (57)
T ss_pred             CCcCCCCCCcCcCCCCcccCHHHhhhhHHH
Confidence            578999999877655 59999999876654

>PRK00418 DNA gyrase inhibitor; Reviewed

Probab=89.38  E-value=0.13  Score=36.11  Aligned_cols=29  Identities=31%  Similarity=0.812  Sum_probs=23.0

Q ss_pred             CCcccccccccc---C-CCe-eecccceeeccch
Q 031501           53 TNTCEVCDRSLL---D-SFR-FCSLGCKIVGTSK   81 (158)
Q Consensus        53 ~~~C~~C~R~L~---d-~~~-FCSL~CKv~~~~~   81 (158)
                      +..|-+|++...   + +|+ |||-.||+.+..+
T Consensus         6 ~v~CP~C~k~~~w~~~~~~rPFCS~RCk~IDLg~   39 (62)
T PRK00418          6 TVNCPTCGKPVEWGEISPFRPFCSKRCQLIDLGE   39 (62)
T ss_pred             cccCCCCCCcccccCCCCcCCcccHHHHhhhHHH
Confidence            468999999874   3 675 9999999976655

>COG3024 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.68  E-value=0.15  Score=36.14  Aligned_cols=29  Identities=34%  Similarity=0.864  Sum_probs=23.5

Q ss_pred             CCccccccccccC----CCe-eecccceeeccch
Q 031501           53 TNTCEVCDRSLLD----SFR-FCSLGCKIVGTSK   81 (158)
Q Consensus        53 ~~~C~~C~R~L~d----~~~-FCSL~CKv~~~~~   81 (158)
                      +-.|-+|++...-    +|+ |||-.||+-+...
T Consensus         7 ~v~CP~Cgkpv~w~~~s~frPFCSkRCklIDLg~   40 (65)
T COG3024           7 TVPCPTCGKPVVWGEESPFRPFCSKRCKLIDLGE   40 (65)
T ss_pred             cccCCCCCCcccccccCCcCcchhHhhhhcchhh
Confidence            4679999988874    666 9999999976655

>PF03884 DUF329: Domain of unknown function (DUF329); InterPro: IPR005584 The biological function of these short proteins is unknown, but they contain four conserved cysteines, suggesting that they all bind zinc

Probab=88.58  E-value=0.08  Score=36.42  Aligned_cols=28  Identities=32%  Similarity=0.857  Sum_probs=17.4

Q ss_pred             CccccccccccC----CCe-eecccceeeccch
Q 031501           54 NTCEVCDRSLLD----SFR-FCSLGCKIVGTSK   81 (158)
Q Consensus        54 ~~C~~C~R~L~d----~~~-FCSL~CKv~~~~~   81 (158)
                      ..|-+|++...-    +|+ |||-.||+.+...
T Consensus         3 v~CP~C~k~~~~~~~n~~rPFCS~RCk~iDLg~   35 (57)
T PF03884_consen    3 VKCPICGKPVEWSPENPFRPFCSERCKLIDLGR   35 (57)
T ss_dssp             EE-TTT--EEE-SSSSS--SSSSHHHHHHHHS-
T ss_pred             ccCCCCCCeecccCCCCcCCcccHhhcccCHHH
Confidence            469999988875    677 9999999876554

YacG (Q5X8H6 from SWISSPROT) from Escherichia coli has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins []. The conserved four cysteine motif in these proteins (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.; GO: 0008270 zinc ion binding; PDB: 1LV3_A.

>PF10013 DUF2256: Uncharacterized protein conserved in bacteria (DUF2256); InterPro: IPR017136 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=82.19  E-value=0.46  Score=31.10  Aligned_cols=23  Identities=35%  Similarity=1.002  Sum_probs=20.1

Q ss_pred             CCcccccccccc---------CCCeeecccce
Q 031501           53 TNTCEVCDRSLL---------DSFRFCSLGCK   75 (158)
Q Consensus        53 ~~~C~~C~R~L~---------d~~~FCSL~CK   75 (158)
                      ..+|.+|+|...         |...|||-.|.
T Consensus         8 ~K~C~~C~rpf~WRKKW~~~Wd~VkYCS~rCR   39 (42)
T PF10013_consen    8 SKICPVCGRPFTWRKKWARCWDEVKYCSDRCR   39 (42)
T ss_pred             CCcCcccCCcchHHHHHHHhchhhccHHHHhc
Confidence            578999999987         57899999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	158
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 19/68 (27%)

Query: 23  DISGVQTYVINSARVV---FLNERPQPRPGKGVTNTC-----EVCDRSLLDSFRFCSLGC 74
           D S      I+S +      L  +P           C      V +    ++F   +L C
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYEN--------CLLVLLNVQNAKAWNAF---NLSC 266

Query: 75  KIVGTSKN 82
           KI+ T++ 
Sbjct: 267 KILLTTRF 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	158
2das_A	62	Zinc finger MYM-type protein 5; trash domain, stru	90.78
2w0t_A	43	Lethal(3)malignant brain tumor-like 2 protein; zin	89.95

>2das_A Zinc finger MYM-type protein 5; trash domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.17

Probab=90.78  E-value=0.16  Score=34.73  Aligned_cols=31  Identities=29%  Similarity=0.553  Sum_probs=25.0

Q ss_pred             CCCCCCCCCccccccccccC----------CCeeeccccee
Q 031501           46 PRPGKGVTNTCEVCDRSLLD----------SFRFCSLGCKI   76 (158)
Q Consensus        46 ~r~~~g~~~~C~~C~R~L~d----------~~~FCSL~CKv   76 (158)
                      .++.+.....|+.|.+.|+.          .-.|||..|-.
T Consensus        13 q~~~~~~~v~C~~CKk~lqKGQtAyqrkGs~~LFCS~~CL~   53 (62)
T 2das_A           13 QQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLS   53 (62)
T ss_dssp             CCCSSCSSCBCTTTCCBCCTTSCCEECTTCCCEESSHHHHH
T ss_pred             cCCCCccccChhhccchhhcCceeeeecCchhheechHHHc
Confidence            45566678899999999994          45799999964

>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}

Probab=89.95  E-value=0.065  Score=34.23  Aligned_cols=25  Identities=32%  Similarity=0.797  Sum_probs=18.1

Q ss_pred             CCCCcccccccc-ccC-----CCeeecccce
Q 031501           51 GVTNTCEVCDRS-LLD-----SFRFCSLGCK   75 (158)
Q Consensus        51 g~~~~C~~C~R~-L~d-----~~~FCSL~CK   75 (158)
                      ...-.||.|++. ...     .-+|||++|-
T Consensus         4 ~~~~~CE~CG~~g~~~~F~~ksKRFCS~~Ca   34 (43)
T 2w0t_A            4 SEPAVCEMCGIVGTREAFFSKTKRFCSVSCS   34 (43)
T ss_dssp             CCEEECTTTCCEEETTTSCTTTSSSSSHHHH
T ss_pred             CceehhhhhcCcchhhhhccCCcceechhhh
Confidence            345689999984 333     3489999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	158
d1lv3a_	65	Hypothetical zinc finger protein YacG {Escherichia	86.57
d2dasa1	49	Zinc finger MYM-type protein 5 {Human (Homo sapien	81.25

>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Hypothetical zinc finger protein YacG
domain: Hypothetical zinc finger protein YacG
species: Escherichia coli [TaxId: 562]

Probab=86.57  E-value=0.045  Score=35.80  Aligned_cols=29  Identities=31%  Similarity=0.878  Sum_probs=22.2

Q ss_pred             CCcccccccccc---C-CCe-eecccceeeccch
Q 031501           53 TNTCEVCDRSLL---D-SFR-FCSLGCKIVGTSK   81 (158)
Q Consensus        53 ~~~C~~C~R~L~---d-~~~-FCSL~CKv~~~~~   81 (158)
                      +-.|-+|++...   + .|+ |||-.||+.+...
T Consensus         6 ~v~CP~C~k~~~w~~~~~~rPFCS~RCk~IDLg~   39 (65)
T d1lv3a_           6 TVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGE   39 (65)
T ss_dssp             EEECTTTCCEEECSSSSSCCSSSSHHHHHHHHSC
T ss_pred             eeeCCCCCCccccCCCCCcCCchhHhhhhccHHH
Confidence            457999999763   2 565 9999999875554

>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: TRASH domain
domain: Zinc finger MYM-type protein 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.25  E-value=0.43  Score=29.62  Aligned_cols=29  Identities=31%  Similarity=0.576  Sum_probs=23.2

Q ss_pred             CCCCCCCccccccccccC----------CCeeeccccee
Q 031501           48 PGKGVTNTCEVCDRSLLD----------SFRFCSLGCKI   76 (158)
Q Consensus        48 ~~~g~~~~C~~C~R~L~d----------~~~FCSL~CKv   76 (158)
                      +.+.+.-.|..|.+.|+.          ...|||..|-.
T Consensus         8 p~~a~~v~Ca~Ckk~lqKGQTAyqrkGs~~LFCSt~Cl~   46 (49)
T d2dasa1           8 LTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLS   46 (49)
T ss_dssp             CSSCSSCBCTTTCCBCCTTSCCEECTTCCCEESSHHHHH
T ss_pred             CCCceEeEecccchHHhccchHHhhCCCcceeEcchhhc
Confidence            456677899999999994          36799999853