Citrus Sinensis ID: 031516

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH
Secondary Structure (PSIPRED)
ccHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHcHHHHHHHHcccccccccccHHHcHHHHHHHHHHcccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHcHHcccccccHHccccccHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHcccccccccccccEEEEEcHHHcHHHccccccccccccccccccHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mcfddfcyslhAFEQVACSQCSETMEREILAIhkgencpqrivtcdfcefplpavdlaehqevcgNRTELCHLCNRYIRLRErynhesrctgvpentvgssrnvraaesdqgahrrpappppnefyrKRFLLTIAITGIAVLLgslffprktetsqvh
Flexible Loop (DISEMBL)
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRErynhesrctgvpentvgssrnvraaesdqgahrrpappppnEFYRKRFLLTIAITGIAVLLGslffprktetsqvh
Low Complexity Region (SEG)
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH
Disordered region (IsUnstruct)
*CFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHE***********************************************************************
Disordered Region (DISOPRED)
*CFDD**YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHES******************************************LLTIAITGIAVLLGSLF***********
Disordered Region (DISEMBL)
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGS******************PPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH
Disordered Region (DISPRO)
*CFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCT**************************APPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRK*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	158	2.2.26 [Sep-21-2011]
Q6GPH4	301	XIAP-associated factor 1	yes	no	0.708	0.372	0.300	3e-10
Q99MM4	576	TRAF-type zinc finger dom	yes	no	0.506	0.138	0.382	2e-09
Q3UDK1	580	TRAF-type zinc finger dom	yes	no	0.506	0.137	0.382	2e-09
Q58D05	580	TRAF-type zinc finger dom	yes	no	0.632	0.172	0.313	3e-08
Q58DH1	297	XIAP-associated factor 1	no	no	0.531	0.282	0.344	2e-07
Q4R970	582	TRAF-type zinc finger dom	N/A	no	0.474	0.128	0.355	3e-06
O14545	582	TRAF-type zinc finger dom	no	no	0.474	0.128	0.355	3e-06

>sp|Q6GPH4|XAF1_HUMAN XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 14  EQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 73
           +QV C+ C ++M++  L  HK   C +R V C FC+  +    L  H+  CG+RTELC  
Sbjct: 55  QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQG 114

Query: 74  CNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 126
           C ++I  R    H   C    +  +G    + A E +   H      P N+++
Sbjct: 115 CGQFIMHRMLAQHRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPENKYF 166

Seems to function as a negative regulator of members of the IAP (inhibitor of apoptosis protein) family. Inhibits anti-caspase activity of BIRC4. Induces cleavage and inactivation of BIRC4 independent of caspase activation. Mediates TNF-alpha-induced apoptosis and is involved in apoptosis in trophoblast cells. May inhibit BIRC4 indirectly by activating the mitochondrial apoptosis pathway. After translocation to mitochondra, promotes translocation of BAX to mitochondria and cytochrome c release from mitochondria. Seems to promote the redistribution of BIRC4 from the cytoplasm to the nucleus, probably independent of BIRC4 inactivation which seems to occur in the cytoplasm. The BIRC4-XAF1 complex mediates down-regulation of BIRC5/survivin; the process requires the E3 ligase activity of BIRC4. Seems to be involved in cellular sensitivity to the proapoptotic actions of TRAIL. May be a tumor suppressor by mediating apoptosis resistance of cancer cells.
Homo sapiens (taxid: 9606)

>sp|Q99MM4|TRAD1_RAT TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 15  QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
           QV C +C++ +E+  L  H    CP R+  C  C+  L  V L EH++ CG RTELC  C
Sbjct: 61  QVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119

Query: 75  NRYIRLRERYNHESRCTGVPE 95
            R + ++E   H + C  V E
Sbjct: 120 GRNVLVKELQTHPAVCGRVEE 140

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Rattus norvegicus (taxid: 10116)

>sp|Q3UDK1|TRAD1_MOUSE TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 15  QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
           QV C +C++ +E+  L  H    CP R+  C  C+  L  V L EH++ CG RTELC  C
Sbjct: 61  QVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119

Query: 75  NRYIRLRERYNHESRCTGVPE 95
            R + ++E   H   C  V E
Sbjct: 120 GRNVLVKELKTHPEVCGRVEE 140

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Mus musculus (taxid: 10090)

>sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 15  QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
           QV C +C++ +E+  L  H+   CP R+  C  C+  L  + L +H++ CG RTELC  C
Sbjct: 61  QVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTC 119

Query: 75  NRYIRLRERYNHESRCT-GVPENTVGSSRNVRAAESDQGAHR 115
            R + +++   H   C   V E  V ++    A +   G  R
Sbjct: 120 GRNVLVKDLKTHPEVCGRDVEEKRVEAAMPPNAYDESWGPDR 161

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Bos taurus (taxid: 9913)

>sp|Q58DH1|XAF1_BOVIN XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 3   FDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEH 60
            ++ C   H  +QV C+ C +++ +  L  H+ + C +R V C FC+    L  VDL EH
Sbjct: 46  MEEHCQGGH--QQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEH 103

Query: 61  QEVCGNRTELCHLCNRYIRLRERYNHESRC 90
              CG +TELC  C +++ LR    H   C
Sbjct: 104 H--CGQQTELCPDCGQHVMLRVLARHREEC 131

Seems to function as a negative regulator of members of the IAP (inhibitor of apoptosis protein) family. Inhibits anti-caspase activity of BIRC4. Induces cleavage and inactivation of BIRC4 independent of caspase activation. Mediates TNF-alpha-induced apoptosis and is involved in apoptosis in trophoblast cells. May inhibit BIRC4 indirectly by activating the mitochondrial apoptosis pathway. After translocation to mitochondra, promotes translocation of BAX to mitochondria and cytochrome c release from mitochondria. Seems to promote the redistribution of BIRC4 from the cytoplasm to the nucleus, probably independent of BIRC4 inactivation which seems to occur in the cytoplasm. The BIRC4-XAF1 complex mediates down-regulation of BIRC5/survivin; the process requires the E3 ligase activity of BIRC4. Seems to be involved in cellular sensitivity to the proapoptotic actions of TRAIL. May be a tumor suppressor by mediating apoptosis resistance of cancer cells.

Bos taurus (taxid: 9913)

>sp|Q4R970|TRAD1_MACFA TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 15  QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
           QV C +C++ +E+ +L  H+   CP R+  C  C+  L  + L EH++ CG RTELC  C
Sbjct: 61  QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119

Query: 75  NRYIRLRERYNHESRC 90
            R + +++   H   C
Sbjct: 120 GRNVLVKDLKTHPEVC 135

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Macaca fascicularis (taxid: 9541)

>sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 15  QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
           QV C +C++ +E+ +L  H+   CP R+  C  C+  L  + L EH++ CG RTELC  C
Sbjct: 61  QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119

Query: 75  NRYIRLRERYNHESRC 90
            R + +++   H   C
Sbjct: 120 GRNVLVKDLKTHPEVC 135

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
255572838	199	nucleic acid binding protein, putative [	0.949	0.753	0.737	1e-58
224063359	201	predicted protein [Populus trichocarpa]	0.917	0.721	0.761	6e-58
388499446	203	unknown [Lotus japonicus]	0.968	0.753	0.690	4e-54
302142096	206	unnamed protein product [Vitis vinifera]	0.930	0.713	0.664	7e-54
225459034	207	PREDICTED: XIAP-associated factor 1-like	0.930	0.710	0.660	1e-52
357490121	436	TRAF-type zinc finger domain-containing	0.905	0.327	0.646	6e-52
351722506	199	uncharacterized protein LOC100306673 [Gl	0.930	0.738	0.649	6e-51
388517051	134	unknown [Lotus japonicus]	0.848	1.0	0.723	2e-50
302142097	261	unnamed protein product [Vitis vinifera]	0.911	0.551	0.629	3e-50
225459028	212	PREDICTED: XIAP-associated factor 1-like	0.911	0.679	0.629	4e-50

>gi|255572838|ref|XP_002527351.1| nucleic acid binding protein, putative [Ricinus communis] gi|223533270|gb|EEF35023.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/156 (73%), Positives = 129/156 (82%), Gaps = 6/156 (3%)

Query: 3   FDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQE 62
           +D+   + HA   VACS CSETMERE+LAIHKGENCPQRIVTC+FCEFPLPA+DLAEHQE
Sbjct: 50  YDEHFSNTHA--PVACSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQE 107

Query: 63  VCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPP 122
           VCGNRTELCHLCNRYIRLRERYNHE RCTGV  N VG+SR+VRAAE  QGA RR    PP
Sbjct: 108 VCGNRTELCHLCNRYIRLRERYNHEIRCTGVTNNIVGTSRDVRAAERPQGAPRR----PP 163

Query: 123 NEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
            ++ R+R + TIAITGIAV+LGSL F RKTE + VH
Sbjct: 164 QDYSRRRLMFTIAITGIAVILGSLLFQRKTENNPVH 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063359|ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|222842837|gb|EEE80384.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (581), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 125/151 (82%), Gaps = 6/151 (3%)

Query: 10  LHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
           L+    VACS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPAVDLAEHQEVCGNRTE
Sbjct: 55  LNTHAPVACSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114

Query: 70  LCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAE--SDQGAHRRPAPPPPNEFYR 127
           LCH+CN+YIRLRERYNHESRCTG+P+ TV SSR+VRAAE    QG  RR     P +F R
Sbjct: 115 LCHMCNKYIRLRERYNHESRCTGLPDTTVESSRDVRAAERRQPQGPQRR----QPQDFSR 170

Query: 128 KRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
           KR L TIAITGIAVLLGS  F +KTE SQVH
Sbjct: 171 KRLLFTIAITGIAVLLGSFLFQKKTEDSQVH 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499446|gb|AFK37789.1| unknown [Lotus japonicus]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 107/155 (69%), Positives = 127/155 (81%), Gaps = 2/155 (1%)

Query: 4   DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
           +D   S HA   V+CS CSETM+R+IL IHKGENCPQRIVTC+FCEFPLPAVDLAEHQEV
Sbjct: 51  EDHYLSTHA--PVSCSLCSETMQRDILDIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEV 108

Query: 64  CGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPN 123
           CGNRTELC+LCN+Y+RLRER++HE+RC GV +NTVGSSR+VR AE D+G  RR   P  N
Sbjct: 109 CGNRTELCYLCNKYVRLRERFSHEARCNGVQDNTVGSSRDVREAERDEGPPRRRPRPQQN 168

Query: 124 EFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
           +F  +R L+TIAITGIAV+LGS+F  +K E S VH
Sbjct: 169 DFSTRRLLITIAITGIAVILGSIFLQKKAEPSDVH 203

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142096|emb|CBI19299.3| unnamed protein product [Vitis vinifera]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 105/158 (66%), Positives = 125/158 (79%), Gaps = 11/158 (6%)

Query: 8   YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR 67
           + L+    V+CS CSETMEREILA+H+GENCPQRIVTC+FCEFPLPA+DL+EHQEVCGNR
Sbjct: 53  HYLNTHASVSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNR 112

Query: 68  TELCHLCNRYIRLRERYNHESRC-------TGVPENTVGSSRNVRAAESDQGAHRRPAPP 120
           TELCHLC RY+RLRER +HE+ C        GVP+NTV  SR+ RAAE +QG  RR    
Sbjct: 113 TELCHLCRRYVRLRERNDHEANCNGVSYDSVGVPDNTVSPSRDARAAEREQGGRRR---- 168

Query: 121 PPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
           PP EF ++R L TIAITGIAV+LGSLFF RKTE +++H
Sbjct: 169 PPQEFSQRRVLFTIAITGIAVILGSLFFQRKTENTEMH 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459034|ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vitis vinifera]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 125/159 (78%), Gaps = 12/159 (7%)

Query: 8   YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR 67
           + L+    V+CS CSETMEREILA+H+GENCPQRIVTC+FCEFPLPA+DL+EHQEVCGNR
Sbjct: 53  HYLNTHASVSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNR 112

Query: 68  TELCHLCNRYIRLRERYNHESRC-------TGVPENTVG-SSRNVRAAESDQGAHRRPAP 119
           TELCHLC RY+RLRER +HE+ C        GVP+NTV  S R+ RAAE +QG  RR   
Sbjct: 113 TELCHLCRRYVRLRERNDHEANCNGVSYDSVGVPDNTVSPSRRDARAAEREQGGRRR--- 169

Query: 120 PPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
            PP EF ++R L TIAITGIAV+LGSLFF RKTE +++H
Sbjct: 170 -PPQEFSQRRVLFTIAITGIAVILGSLFFQRKTENTEMH 207

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357490121|ref|XP_003615348.1| TRAF-type zinc finger domain-containing protein [Medicago truncatula] gi|355516683|gb|AES98306.1| TRAF-type zinc finger domain-containing protein [Medicago truncatula]

 Score =  208 bits (529), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 95/147 (64%), Positives = 121/147 (82%), Gaps = 4/147 (2%)

Query: 13  FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
            + ++CS CSET++R+I+ IH GENCP+RIVTCDFCEFPLPA+DLAEHQEVCGNRTELCH
Sbjct: 293 LKNISCSLCSETVDRDIIDIHTGENCPKRIVTCDFCEFPLPAIDLAEHQEVCGNRTELCH 352

Query: 73  LCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYRKRFLL 132
           LCN+Y+RLRERYNHE+ C G+ ++TVGSSRNVR  E ++G  RR    P NE+  KR L 
Sbjct: 353 LCNKYVRLRERYNHEAGCNGIQDSTVGSSRNVRETERNEGVPRR---QPRNEYSTKRLLF 409

Query: 133 TIAIT-GIAVLLGSLFFPRKTETSQVH 158
           +IA+T GIAV+LGS+F  +KT+ S++H
Sbjct: 410 SIAVTGGIAVILGSMFLQKKTDPSEMH 436

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722506|ref|NP_001238526.1| uncharacterized protein LOC100306673 [Glycine max] gi|255629243|gb|ACU14966.1| unknown [Glycine max]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 98/151 (64%), Positives = 117/151 (77%), Gaps = 4/151 (2%)

Query: 8   YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR 67
           + L+    VACS CSETMER+IL IH+ ENCP+R++TC+FCEFPLPA+DLAEHQEVCGNR
Sbjct: 53  HYLNTHAPVACSLCSETMERDILDIHREENCPKRMITCEFCEFPLPAIDLAEHQEVCGNR 112

Query: 68  TELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYR 127
           TELCHLCN+Y+RLRE YNHE  C  + +N+ GSSR VR AE D+GA RRP     N+F  
Sbjct: 113 TELCHLCNKYVRLRELYNHEDSCNTIQDNSAGSSRYVRPAERDEGARRRPQ----NDFSG 168

Query: 128 KRFLLTIAITGIAVLLGSLFFPRKTETSQVH 158
           KR   TIA TGIAV+LGS+FF RKT+ S V 
Sbjct: 169 KRLFFTIAFTGIAVVLGSIFFQRKTDLSNVQ 199

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517051|gb|AFK46587.1| unknown [Lotus japonicus]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 114/134 (85%)

Query: 25  MEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERY 84
           M+R+IL IHKGENCPQRIVTC+FCEFPLPAVDLAEHQEVCGNRTELC+LCN+Y+RLRER+
Sbjct: 1   MQRDILDIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYLCNKYVRLRERF 60

Query: 85  NHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLG 144
           +HE+RC GV +NTVGSSRNVR AE D+G  RR   P  N+F  +R L+TIAITGIAV+LG
Sbjct: 61  SHEARCNGVQDNTVGSSRNVREAERDEGPPRRRPRPQQNDFSTRRLLITIAITGIAVILG 120

Query: 145 SLFFPRKTETSQVH 158
           S+F  +K E S VH
Sbjct: 121 SIFLQKKAEPSDVH 134

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142097|emb|CBI19300.3| unnamed protein product [Vitis vinifera]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 102/162 (62%), Positives = 118/162 (72%), Gaps = 18/162 (11%)

Query: 8   YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR 67
           + L+    V+CS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPA+DL+EHQEVCGNR
Sbjct: 102 HYLNTHAAVSCSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNR 161

Query: 68  TELCHLCNRYIRLRERYNHESRCTGVPENTVG---------------SSRNVRAAESDQG 112
           TELCHLC RY+RL ER  HE+ C G P+N+VG               S R+ RAAE +QG
Sbjct: 162 TELCHLCRRYVRLCERNGHEAMCNGAPDNSVGVQDNGVGVSDHTVSSSRRDARAAEREQG 221

Query: 113 AHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTET 154
             RR   PP   F ++R L TIAITGIAVLLGSLFF +KTE 
Sbjct: 222 GQRR---PPLQGFSQRRLLFTIAITGIAVLLGSLFFQKKTEN 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459028|ref|XP_002285617.1| PREDICTED: XIAP-associated factor 1-like isoform 1 [Vitis vinifera]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 102/162 (62%), Positives = 118/162 (72%), Gaps = 18/162 (11%)

Query: 8   YSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR 67
           + L+    V+CS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPA+DL+EHQEVCGNR
Sbjct: 53  HYLNTHAAVSCSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNR 112

Query: 68  TELCHLCNRYIRLRERYNHESRCTGVPENTVG---------------SSRNVRAAESDQG 112
           TELCHLC RY+RL ER  HE+ C G P+N+VG               S R+ RAAE +QG
Sbjct: 113 TELCHLCRRYVRLCERNGHEAMCNGAPDNSVGVQDNGVGVSDHTVSSSRRDARAAEREQG 172

Query: 113 AHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTET 154
             RR   PP   F ++R L TIAITGIAVLLGSLFF +KTE 
Sbjct: 173 GQRR---PPLQGFSQRRLLFTIAITGIAVLLGSLFFQKKTEN 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
TAIR|locus:2024351	192	AT1G09920 [Arabidopsis thalian	0.867	0.713	0.641	5e-44
ZFIN|ZDB-GENE-060929-840	273	zgc:153893 "zgc:153893" [Danio	0.563	0.326	0.361	1.8e-14
UNIPROTKB|Q6GPH4	301	XAF1 "XIAP-associated factor 1	0.759	0.398	0.292	6.2e-14
UNIPROTKB|C9J7Z8	164	XAF1 "XIAP-associated factor 1	0.537	0.518	0.344	1.2e-12
UNIPROTKB|I3L3D9	133	XAF1 "XIAP-associated factor 1	0.537	0.639	0.344	1.2e-12
UNIPROTKB|F8VVF3	135	TRAFD1 "TRAF-type zinc finger	0.474	0.555	0.355	8.2e-12
UNIPROTKB|Q58DH1	297	XAF1 "XIAP-associated factor 1	0.746	0.397	0.288	9e-12
ZFIN|ZDB-GENE-070410-43	565	zgc:162228 "zgc:162228" [Danio	0.563	0.157	0.376	1.5e-11
UNIPROTKB|F8VNX8	283	TRAFD1 "TRAF-type zinc finger	0.474	0.265	0.355	1.6e-11
RGD|620171	576	Trafd1 "TRAF type zinc finger	0.506	0.138	0.382	2e-11

TAIR|locus:2024351 AT1G09920 [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 93/145 (64%), Positives = 105/145 (72%)

Query:    10 LHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
             L+    +ACS C ET+EREI   HKGE CP+RIVTC+FCEFPLPAVDLAEHQEVCGNRTE
Sbjct:    55 LNTHAPIACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114

Query:    70 LCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNV-RAAESDQGAHRRPAPPPPNEFYRK 128
             LC+ CN Y+RLRERYNHE++C G    TV SSR + RAAE D    RR      N    K
Sbjct:   115 LCYQCNSYVRLRERYNHETKCPG----TVESSRRIPRAAEGDGNGRRRR---DGNGVSNK 167

Query:   129 RFLLTIAITGIAVLLGSLFFPRKTE 153
             R   TIAITGIAV++GSLFF RK E
Sbjct:   168 RLFFTIAITGIAVIIGSLFFQRKPE 192

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

ZFIN|ZDB-GENE-060929-840 zgc:153893 "zgc:153893" [Danio rerio (taxid:7955)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 34/94 (36%), Positives = 54/94 (57%)

Query:    11 HAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTEL 70
             HA  +V C +C + MER  L  H+   CP+R   C+FC+  LP   L  H+  CG+RTE 
Sbjct:    56 HA--EVKCKKCKKKMERRHLLDHENNECPERFEICEFCQLELPLSTLKVHKVSCGSRTER 113

Query:    71 CHLCNRYIRLRERYNHESRCTGVPENTVGSSRNV 104
             C  C++Y+++ ++ +H   C   P  T  +SR++
Sbjct:   114 CSDCDQYVKMTDQIDHAQIC---PATTQTTSRDL 144

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q6GPH4 XAF1 "XIAP-associated factor 1" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 36/123 (29%), Positives = 58/123 (47%)

Query:     4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
             ++ C   H  +QV C+ C ++M++  L  HK   C +R V C FC+  +    L  H+  
Sbjct:    47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104

Query:    64 CGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPN 123
             CG+RTELC  C ++I  R    H   C    +  +G    + A E +   H      P N
Sbjct:   105 CGSRTELCQGCGQFIMHRMLAQHRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPEN 163

Query:   124 EFY 126
             +++
Sbjct:   164 KYF 166

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS

GO:0060337 "type I interferon-mediated signaling pathway" evidence=TAS

GO:0035456 "response to interferon-beta" evidence=IDA

UNIPROTKB|C9J7Z8 XAF1 "XIAP-associated factor 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 30/87 (34%), Positives = 45/87 (51%)

Query:     4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
             ++ C   H  +QV C+ C ++M++  L  HK   C +R V C FC+  +    L  H+  
Sbjct:    47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104

Query:    64 CGNRTELCHLCNRYIRLRERYNHESRC 90
             CG+RTELC  C ++I  R    H   C
Sbjct:   105 CGSRTELCQGCGQFIMHRMLAQHRDVC 131

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3L3D9 XAF1 "XIAP-associated factor 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 30/87 (34%), Positives = 45/87 (51%)

Query:     4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
             ++ C   H  +QV C+ C ++M++  L  HK   C +R V C FC+  +    L  H+  
Sbjct:    47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104

Query:    64 CGNRTELCHLCNRYIRLRERYNHESRC 90
             CG+RTELC  C ++I  R    H   C
Sbjct:   105 CGSRTELCQGCGQFIMHRMLAQHRDVC 131

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F8VVF3 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query:    15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
             QV C +C++ +E+ +L  H+   CP R+  C  C+  L  + L EH++ CG RTELC  C
Sbjct:    61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119

Query:    75 NRYIRLRERYNHESRC 90
              R + +++   H   C
Sbjct:   120 GRNVLVKDLKTHPEVC 135

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0045824 "negative regulation of innate immune response" evidence=IEA

UNIPROTKB|Q58DH1 XAF1 "XIAP-associated factor 1" [Bos taurus (taxid:9913)]

 Score = 163 (62.4 bits), Expect = 9.0e-12, P = 9.0e-12
 Identities = 36/125 (28%), Positives = 61/125 (48%)

Query:     4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEHQ 61
             ++ C   H  +QV C+ C +++ +  L  H+ + C +R V C FC+    L  VDL EH 
Sbjct:    47 EEHCQGGH--QQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH 104

Query:    62 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPP 121
               CG +TELC  C +++ LR    H   C    +  +   +++   ES+   H      P
Sbjct:   105 --CGQQTELCPDCGQHVMLRVLARHREECQR-EQLRLQKGKSIPVPESNICCHYCNQMIP 161

Query:   122 PNEFY 126
              N+++
Sbjct:   162 GNKYF 166

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

ZFIN|ZDB-GENE-070410-43 zgc:162228 "zgc:162228" [Danio rerio (taxid:7955)]

 Score = 167 (63.8 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 35/93 (37%), Positives = 49/93 (52%)

Query:    11 HAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTEL 70
             HA EQ  C +C   +E+  L  H+   C  R+V C FC+  L +    EH+E CG RTE 
Sbjct:    55 HAEEQ--C-KCGLKIEKRFLETHQRSECSHRLVPCQFCDLELASFQAKEHEEYCGTRTEP 111

Query:    71 CHLCNRYIRLRERYNHESRCTGV-PENTVGSSR 102
             C +C   + LRE++ H + C  + P     SSR
Sbjct:   112 CPVCKCNVMLREQHIHPALCGSLTPPEERHSSR 144

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F8VNX8 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query:    15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
             QV C +C++ +E+ +L  H+   CP R+  C  C+  L  + L EH++ CG RTELC  C
Sbjct:    61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119

Query:    75 NRYIRLRERYNHESRC 90
              R + +++   H   C
Sbjct:   120 GRNVLVKDLKTHPEVC 135

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0045824 "negative regulation of innate immune response" evidence=IEA

RGD|620171 Trafd1 "TRAF type zinc finger domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 31/81 (38%), Positives = 44/81 (54%)

Query:    15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
             QV C +C++ +E+  L  H    CP R+  C  C+  L  V L EH++ CG RTELC  C
Sbjct:    61 QVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119

Query:    75 NRYIRLRERYNHESRCTGVPE 95
              R + ++E   H + C  V E
Sbjct:   120 GRNVLVKELQTHPAVCGRVEE 140

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEP

GO:0045824 "negative regulation of innate immune response" evidence=IEA;ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	158
PLN03086	567	PLN03086, PLN03086, PRLI-interacting factor K; Pro	2e-08

>gnl|CDD|178635 PLN03086, PLN03086, PRLI-interacting factor K; Provisional

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)

Query: 21  CSETMEREILAIHKGENCPQRIVTCDFC-------EFPLPAVD----LAEHQEVCGNRTE 69
           C   +E+E +  H+   CP R++TC FC          +   D    ++EH+ +CG+RT 
Sbjct: 483 CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTA 542

Query: 70  LCHLCNRYIRLRE 82
            C  C R + L+E
Sbjct: 543 PCDSCGRSVMLKE 555

Length = 567

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	158
PLN03086	567	PRLI-interacting factor K; Provisional	99.22
PLN03086	567	PRLI-interacting factor K; Provisional	98.88
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	98.77
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	98.67
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.46
KOG0297	391	consensus TNF receptor-associated factor [Signal t	97.27
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	97.25
KOG3576	267	consensus Ovo and related transcription factors [T	97.12
KOG0297	391	consensus TNF receptor-associated factor [Signal t	96.91
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	96.8
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	96.2
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.19
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.23
PF03145	198	Sina: Seven in absentia protein family; InterPro:	94.93
PF03145	198	Sina: Seven in absentia protein family; InterPro:	94.24
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.91
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	93.05
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	92.76
KOG3002	299	consensus Zn finger protein [General function pred	92.51
KOG3608	467	consensus Zn finger proteins [General function pre	91.15
PHA02768	55	hypothetical protein; Provisional	91.02
KOG2186	276	consensus Cell growth-regulating nucleolar protein	90.55
PHA00732	79	hypothetical protein	90.22
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	89.73
KOG3002	299	consensus Zn finger protein [General function pred	89.72
PHA00733	128	hypothetical protein	89.44
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	88.55
PHA00733	128	hypothetical protein	87.86
PHA02768	55	hypothetical protein; Provisional	87.32
KOG3608	467	consensus Zn finger proteins [General function pre	86.36
PHA00616	44	hypothetical protein	82.95
PHA00732	79	hypothetical protein	82.7
KOG3576	267	consensus Ovo and related transcription factors [T	82.65
KOG2186	276	consensus Cell growth-regulating nucleolar protein	81.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	81.69

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.22  E-value=1e-11  Score=112.38  Aligned_cols=79  Identities=33%  Similarity=0.748  Sum_probs=71.8

Q ss_pred             cceecCccCChhhhhhHHhhhhhcCCCccccccccCCCCccc-----------chhhhHHhhhcCcceeccCcccccchh
Q 031516           13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPA-----------VDLAEHQEVCGNRTELCHLCNRYIRLR   81 (158)
Q Consensus        13 y~~V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~-----------~~L~~H~~~C~~r~v~C~~C~~~i~~~   81 (158)
                      +.++.|+ |+..+.+.+|..|+..+|+.+++.|+||+..+..           ..|..|+..|+.+++.|..|++.++.+
T Consensus       476 Hkpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        476 HEPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             CCCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh
Confidence            3778999 9999989999999988999999999999999863           379999999999999999999999999


Q ss_pred             HHHHHHHHCCC
Q 031516           82 ERYNHESRCTG   92 (158)
Q Consensus        82 ~l~~H~~~Cp~   92 (158)
                      +|..|+..|..
T Consensus       555 dm~~H~~~~h~  565 (567)
T PLN03086        555 EMDIHQIAVHQ  565 (567)
T ss_pred             hHHHHHHHhhc
Confidence            99999988764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.88  E-value=2e-09  Score=97.55  Aligned_cols=98  Identities=24%  Similarity=0.462  Sum_probs=73.5

Q ss_pred             hcCccceecCc--cCChhhhhhHHhhhhh-cCCC---------------ccccccccCCCCcccchhhhHHh-hhcCcce
Q 031516            9 SLHAFEQVACS--QCSETMEREILAIHKG-ENCP---------------QRIVTCDFCEFPLPAVDLAEHQE-VCGNRTE   69 (158)
Q Consensus         9 ~y~~y~~V~C~--~C~~~i~r~~L~~H~~-~~C~---------------~R~v~C~~C~~~~~~~~L~~H~~-~C~~r~v   69 (158)
                      .||.|..+.|+  +|+..+.+.++++|.. ..|.               ..++.|+ |+..+.+.+|..|.. +||.+++
T Consensus       427 ~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~~s~LekH~~~~Hkpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        427 AYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQQGEMEKHMKVFHEPLQCP-CGVVLEKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             hhCCCcceeCCcccccceeeccccccCccCCCCCCccchHHHHHHHHhcCCCccCC-CCCCcchhHHHhhhhccCCCCce
Confidence            58889889887  4766666666666541 1121               2567898 998888899999987 8999999


Q ss_pred             eccCcccccc-----------hhHHHHHHHHCCCCCCCCCCCChhhhhh
Q 031516           70 LCHLCNRYIR-----------LRERYNHESRCTGVPENTVGSSRNVRAA  107 (158)
Q Consensus        70 ~C~~C~~~i~-----------~~~l~~H~~~Cp~~~~~~~~~s~~~~~~  107 (158)
                      .|++|+..+.           .+.|..|+..|+..+..|..++...+++
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh
Confidence            9999998874           3478899999999998887777555444

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=98.77  E-value=1.4e-09  Score=70.42  Aligned_cols=50  Identities=38%  Similarity=0.820  Sum_probs=21.8

Q ss_pred             CccceecCcc--CChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhH
Q 031516           11 HAFEQVACSQ--CSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEH   60 (158)
Q Consensus        11 ~~y~~V~C~~--C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H   60 (158)
                      |++.+|.|+.  |.+.|.+.+|++|+.++|+++++.|+|    |+..+.+.+|++|
T Consensus         5 C~~~~v~C~~~cc~~~i~r~~l~~H~~~~C~~~~v~C~~~~~GC~~~~~~~~l~~H   60 (60)
T PF02176_consen    5 CPFRPVPCPNGCCNEMIPRKELDDHLENECPKRPVPCPYSPYGCKERVPREDLEEH   60 (60)
T ss_dssp             STTSEEE-TT--S-BEEECCCHHHHHHTTSTTSEEE-SS----S--EEEHHHHHHC
T ss_pred             CCCCEeeCCCCCcccceeHHHHHHHHHccCCCCcEECCCCCCCCCCccchhHHhCC
Confidence            4445555542  333344555555554455555555555    5555554444443

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=98.67  E-value=1e-08  Score=66.31  Aligned_cols=53  Identities=30%  Similarity=0.656  Sum_probs=44.0

Q ss_pred             hhhcCCCcccccccc--CCCCcccchhhhHHh-hhcCcceeccC----cccccchhHHHHH
Q 031516           33 HKGENCPQRIVTCDF--CEFPLPAVDLAEHQE-VCGNRTELCHL----CNRYIRLRERYNH   86 (158)
Q Consensus        33 H~~~~C~~R~v~C~~--C~~~~~~~~L~~H~~-~C~~r~v~C~~----C~~~i~~~~l~~H   86 (158)
                      |+. .|+++++.|++  |+..+.+.+|..|.. .|+.+++.|++    |+..+.+.+|.+|
T Consensus         1 H~~-~C~~~~v~C~~~cc~~~i~r~~l~~H~~~~C~~~~v~C~~~~~GC~~~~~~~~l~~H   60 (60)
T PF02176_consen    1 HEE-ECPFRPVPCPNGCCNEMIPRKELDDHLENECPKRPVPCPYSPYGCKERVPREDLEEH   60 (60)
T ss_dssp             HHT-TSTTSEEE-TT--S-BEEECCCHHHHHHTTSTTSEEE-SS----S--EEEHHHHHHC
T ss_pred             Ccc-cCCCCEeeCCCCCcccceeHHHHHHHHHccCCCCcEECCCCCCCCCCccchhHHhCC
Confidence            664 59999999999  778899999999999 99999999998    9999999999887

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.46  E-value=1.7e-07  Score=78.16  Aligned_cols=81  Identities=17%  Similarity=0.412  Sum_probs=70.7

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcc-cchhhhHHh-hhcCcceeccCcccccchhHH-HHHHHH-
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQE-VCGNRTELCHLCNRYIRLRER-YNHESR-   89 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~-~~~L~~H~~-~C~~r~v~C~~C~~~i~~~~l-~~H~~~-   89 (158)
                      .-.|..||+.|.| -.|+.|++++-.++|+.|++|++.|. +++|..|++ +-.-+...|+.|++.+.+..+ ..|++. 
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            3467789999999 79999999999999999999999998 599999998 888889999999999998864 489764 


Q ss_pred             CCCCCC
Q 031516           90 CTGVPE   95 (158)
Q Consensus        90 Cp~~~~   95 (158)
                      |.....
T Consensus       267 C~~~~~  272 (279)
T KOG2462|consen  267 CLKYLA  272 (279)
T ss_pred             cccccc
Confidence            766544

>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]

Probab=97.27  E-value=0.00018  Score=62.98  Aligned_cols=79  Identities=28%  Similarity=0.512  Sum_probs=61.6

Q ss_pred             eecCc----cCChhhhhhHHhhhhhcCCCcccccccc-CCCCcccchhhhHHh-hhcCcceeccCcccccchhHHHHHHH
Q 031516           15 QVACS----QCSETMEREILAIHKGENCPQRIVTCDF-CEFPLPAVDLAEHQE-VCGNRTELCHLCNRYIRLRERYNHES   88 (158)
Q Consensus        15 ~V~C~----~C~~~i~r~~L~~H~~~~C~~R~v~C~~-C~~~~~~~~L~~H~~-~C~~r~v~C~~C~~~i~~~~l~~H~~   88 (158)
                      ++.|.    +|.+.+....+++|+ ..|  ..+.|++ |+..+...++..|++ .|+.+...|..|+..+...++..|..
T Consensus        86 ~i~c~~~~~GC~~~~~l~~~~~Hl-~~c--~~~~C~~~C~~~~~~~d~~~hl~~~C~~~~~~c~~~~~~~~~~~~~~h~~  162 (391)
T KOG0297|consen   86 PIRCIFASRGCRADLELEALQGHL-STC--DPLKCPHRCGVQVPRDDLEDHLEAECPRRSLKCSLCQSDSILILLEAHEE  162 (391)
T ss_pred             ccccccCCCCccccccHHHHHhHh-ccC--CcccCccccccccchHHHHHHHhcccccccccchhhcCccchhhhhhcCC
Confidence            45664    788888888888888 467  7888877 888888888888886 89888888888888888777778876


Q ss_pred             HCCCCCCCC
Q 031516           89 RCTGVPENT   97 (158)
Q Consensus        89 ~Cp~~~~~~   97 (158)
                      . |.....+
T Consensus       163 ~-~~~~~~c  170 (391)
T KOG0297|consen  163 N-PQAEVSC  170 (391)
T ss_pred             C-CCccccc
Confidence            5 4444433

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=97.25  E-value=0.00025  Score=59.42  Aligned_cols=72  Identities=17%  Similarity=0.321  Sum_probs=57.2

Q ss_pred             cCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcccc-hhhhHHh-hhcCcceeccCcccccc-hhHHHHHHHHC
Q 031516           17 ACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPAV-DLAEHQE-VCGNRTELCHLCNRYIR-LRERYNHESRC   90 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~~-~L~~H~~-~C~~r~v~C~~C~~~i~-~~~l~~H~~~C   90 (158)
                      .|+.|++.... ..|.-|++++=  -+.+|..|++.|.+. .|+.|.. +.+++|..|+.|++.+. |++|..|+.+-
T Consensus       163 ~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  163 SCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             cCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhh
Confidence            57778887554 67777876542  467899999999874 6889998 99999999999999876 45799998753

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=97.12  E-value=0.00019  Score=58.28  Aligned_cols=78  Identities=24%  Similarity=0.465  Sum_probs=64.3

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHCC
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRCT   91 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~Cp   91 (158)
                      ..|.-|++.|.. +-|..|+.-+-+-+...|.+|++.|.. -+|+.|.. +.+-+|+.|..|++.+..+ .|..|++--.
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            468889999997 677889865556677899999999975 78999998 9999999999999998766 7889986444


Q ss_pred             CC
Q 031516           92 GV   93 (158)
Q Consensus        92 ~~   93 (158)
                      ..
T Consensus       198 gv  199 (267)
T KOG3576|consen  198 GV  199 (267)
T ss_pred             Cc
Confidence            33

>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]

Probab=96.91  E-value=0.00059  Score=59.83  Aligned_cols=67  Identities=24%  Similarity=0.533  Sum_probs=60.3

Q ss_pred             ceecCc-cCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCcceecc-Ccccccchh
Q 031516           14 EQVACS-QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH-LCNRYIRLR   81 (158)
Q Consensus        14 ~~V~C~-~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~-~C~~~i~~~   81 (158)
                      ..+.|+ .|+..+.+.++.+|+...|+++...|.+|+..+....++.|... |..++.|. .|+.....+
T Consensus       113 ~~~~C~~~C~~~~~~~d~~~hl~~~C~~~~~~c~~~~~~~~~~~~~~h~~~-~~~~~~c~~k~~~~~l~~  181 (391)
T KOG0297|consen  113 DPLKCPHRCGVQVPRDDLEDHLEAECPRRSLKCSLCQSDSILILLEAHEEN-PQAEVSCELKCGKQKLKR  181 (391)
T ss_pred             CcccCccccccccchHHHHHHHhcccccccccchhhcCccchhhhhhcCCC-CCccccccccchhhhhhh
Confidence            567898 59999999999999999999999999999999999999999888 89999997 588776666

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=96.80  E-value=0.00042  Score=64.75  Aligned_cols=72  Identities=28%  Similarity=0.491  Sum_probs=62.4

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHH
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHE   87 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~   87 (158)
                      ..|..|++.|.+ +.|..|.-++-.+|++.|..|.+.|.. ..|.+|.. +-+++|++|..|++.+.-+ ....|+
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            468899999998 799999888999999999999999986 56999998 9999999999999987655 344555

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=96.20  E-value=0.0031  Score=59.17  Aligned_cols=73  Identities=25%  Similarity=0.351  Sum_probs=59.0

Q ss_pred             ecCccCChhhh-hhHHhhhhhcCC-------------CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccc
Q 031516           16 VACSQCSETME-REILAIHKGENC-------------PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIR   79 (158)
Q Consensus        16 V~C~~C~~~i~-r~~L~~H~~~~C-------------~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~   79 (158)
                      ..|+.|..+|. |..|+.|...+=             -.|.++|..|++.|.+ ..|++|+. +-+++|+.|+.|++.+.
T Consensus       241 fsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFS  320 (1007)
T KOG3623|consen  241 FSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFS  320 (1007)
T ss_pred             CcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccc
Confidence            35889999988 478888764322             2478899999999997 46999998 99999999999999887


Q ss_pred             hh-HHHHHHH
Q 031516           80 LR-ERYNHES   88 (158)
Q Consensus        80 ~~-~l~~H~~   88 (158)
                      -+ ....|+.
T Consensus       321 HSGSySSHmS  330 (1007)
T KOG3623|consen  321 HSGSYSSHMS  330 (1007)
T ss_pred             cCCccccccc
Confidence            65 4668874

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.19  E-value=0.0055  Score=38.93  Aligned_cols=45  Identities=22%  Similarity=0.518  Sum_probs=30.3

Q ss_pred             cccccCCCCcccchhhhHHh--hhcC-cceeccCcccccchhHHHHHHH
Q 031516           43 VTCDFCEFPLPAVDLAEHQE--VCGN-RTELCHLCNRYIRLRERYNHES   88 (158)
Q Consensus        43 v~C~~C~~~~~~~~L~~H~~--~C~~-r~v~C~~C~~~i~~~~l~~H~~   88 (158)
                      +.|+||++.+....|..|..  +... ..+.||-|...+. .+|..|+.
T Consensus         3 f~CP~C~~~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~-~~l~~Hl~   50 (54)
T PF05605_consen    3 FTCPYCGKGFSESSLVEHCEDEHRSESKNVVCPICSSRVT-DNLIRHLN   50 (54)
T ss_pred             cCCCCCCCccCHHHHHHHHHhHCcCCCCCccCCCchhhhh-hHHHHHHH
Confidence            56777887777777777754  4443 3578888876544 37777765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.23  E-value=0.016  Score=36.76  Aligned_cols=46  Identities=20%  Similarity=0.470  Sum_probs=35.8

Q ss_pred             ecCccCChhhhhhHHhhhhhcCCC--ccccccccCCCCcccchhhhHHh
Q 031516           16 VACSQCSETMEREILAIHKGENCP--QRIVTCDFCEFPLPAVDLAEHQE   62 (158)
Q Consensus        16 V~C~~C~~~i~r~~L~~H~~~~C~--~R~v~C~~C~~~~~~~~L~~H~~   62 (158)
                      ..||.|++.+....|..|....-.  .+.+.|+.|...+.. +|..|+.
T Consensus         3 f~CP~C~~~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~-~l~~Hl~   50 (54)
T PF05605_consen    3 FTCPYCGKGFSESSLVEHCEDEHRSESKNVVCPICSSRVTD-NLIRHLN   50 (54)
T ss_pred             cCCCCCCCccCHHHHHHHHHhHCcCCCCCccCCCchhhhhh-HHHHHHH
Confidence            579999998888999999754333  346899999987664 8888874

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF03145 Sina: Seven in absentia protein family; InterPro: IPR018121 The seven in absentia (sina) gene was first identified in Drosophila

Probab=94.93  E-value=0.016  Score=45.89  Aligned_cols=52  Identities=23%  Similarity=0.401  Sum_probs=31.9

Q ss_pred             cccccc----CCCCcccchhhhHHhhhcCcceeccC----cccccchhHHHHHHHHCCCC
Q 031516           42 IVTCDF----CEFPLPAVDLAEHQEVCGNRTELCHL----CNRYIRLRERYNHESRCTGV   93 (158)
Q Consensus        42 ~v~C~~----C~~~~~~~~L~~H~~~C~~r~v~C~~----C~~~i~~~~l~~H~~~Cp~~   93 (158)
                      .+.|.+    |...++..++..|++.|+.+|..||.    |+..-...+|..|.......
T Consensus        14 ~~pC~~~~~GC~~~~~~~~~~~HE~~C~~~p~~CP~~~~~C~~~G~~~~l~~Hl~~~H~~   73 (198)
T PF03145_consen   14 KFPCKNAKYGCTETFPYSEKREHEEECPFRPCSCPFPGSGCDWQGSYKELLDHLRDKHSW   73 (198)
T ss_dssp             -EE-CCGGGT---EE-GGGHHHHHHT-TTSEEE-SSSSTT---EEECCCHHHHHHHHTTT
T ss_pred             eecCCCCCCCCcccccccChhhHhccCCCcCCcCCCCCCCccccCCHHHHHHHHHHHCCC
Confidence            445654    77888888999999999999999975    88777777899998764443

The Drosophila Sina protein is essential for the determination of the R7 pathway in photoreceptor cell development: the loss of functional Sina results in the transformation of the R7 precursor cell to a non-neuronal cell type. The Sina protein contains an N-terminal RING finger domain C3HC4-type. Through this domain, Sina binds E2 ubiquitin-conjugating enzymes (UbcD1) Sina also interacts with Tramtrack (TTK88) via PHYL. Tramtrack is a transcriptional repressor that blocks photoreceptor determination, while PHYL down-regulates the activity of TTK88. In turn, the activity of PHYL requires the activation of the Sevenless receptor tyrosine kinase, a process essential for R7 determination. It is thought that Sina targets TTK88 for degradation, therefore promoting the R7 pathway. Murine and human homologues of Sina have also been identified. The human homologue Siah-1 [] also binds E2 enzymes (UbcH5) and through a series of physical interactions, targets beta-catenin for ubiquitin degradation. Siah-1 expression is enhanced by p53, itself promoted by DNA damage. Thus this pathway links DNA damage to beta-catenin degradation [, ]. Sina proteins, therefore, physically interact with a variety of proteins. The N-terminal RING finger domain that binds ubiquitin conjugating enzymes is a C3HC4-type, and does not form part of the alignment for this family. The remainder C-terminal part is involved in interactions with other proteins, and is included in this alignment. In addition to the Drosophila protein and mammalian homologues, whose similarity was noted previously, this family also includes putative homologues from Caenorhabditis elegans, Arabidopsis thaliana.; GO: 0006511 ubiquitin-dependent protein catabolic process, 0007275 multicellular organismal development, 0005634 nucleus; PDB: 2A25_A 1K2F_B 2AN6_C.

>PF03145 Sina: Seven in absentia protein family; InterPro: IPR018121 The seven in absentia (sina) gene was first identified in Drosophila

Probab=94.24  E-value=0.024  Score=44.87  Aligned_cols=48  Identities=29%  Similarity=0.643  Sum_probs=31.1

Q ss_pred             ceecCc----cCChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhHHh
Q 031516           14 EQVACS----QCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~----~C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H~~   62 (158)
                      ..++|+    ||.+.+...++.+|+ ..|++++..|+.    |+-.-...+|..|..
T Consensus        13 ~~~pC~~~~~GC~~~~~~~~~~~HE-~~C~~~p~~CP~~~~~C~~~G~~~~l~~Hl~   68 (198)
T PF03145_consen   13 IKFPCKNAKYGCTETFPYSEKREHE-EECPFRPCSCPFPGSGCDWQGSYKELLDHLR   68 (198)
T ss_dssp             --EE-CCGGGT---EE-GGGHHHHH-HT-TTSEEE-SSSSTT---EEECCCHHHHHH
T ss_pred             ceecCCCCCCCCcccccccChhhHh-ccCCCcCCcCCCCCCCccccCCHHHHHHHHH
Confidence            457787    799999999999998 599999999987    766666688999975

The Drosophila Sina protein is essential for the determination of the R7 pathway in photoreceptor cell development: the loss of functional Sina results in the transformation of the R7 precursor cell to a non-neuronal cell type. The Sina protein contains an N-terminal RING finger domain C3HC4-type. Through this domain, Sina binds E2 ubiquitin-conjugating enzymes (UbcD1) Sina also interacts with Tramtrack (TTK88) via PHYL. Tramtrack is a transcriptional repressor that blocks photoreceptor determination, while PHYL down-regulates the activity of TTK88. In turn, the activity of PHYL requires the activation of the Sevenless receptor tyrosine kinase, a process essential for R7 determination. It is thought that Sina targets TTK88 for degradation, therefore promoting the R7 pathway. Murine and human homologues of Sina have also been identified. The human homologue Siah-1 [] also binds E2 enzymes (UbcH5) and through a series of physical interactions, targets beta-catenin for ubiquitin degradation. Siah-1 expression is enhanced by p53, itself promoted by DNA damage. Thus this pathway links DNA damage to beta-catenin degradation [, ]. Sina proteins, therefore, physically interact with a variety of proteins. The N-terminal RING finger domain that binds ubiquitin conjugating enzymes is a C3HC4-type, and does not form part of the alignment for this family. The remainder C-terminal part is involved in interactions with other proteins, and is included in this alignment. In addition to the Drosophila protein and mammalian homologues, whose similarity was noted previously, this family also includes putative homologues from Caenorhabditis elegans, Arabidopsis thaliana.; GO: 0006511 ubiquitin-dependent protein catabolic process, 0007275 multicellular organismal development, 0005634 nucleus; PDB: 2A25_A 1K2F_B 2AN6_C.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.91  E-value=0.05  Score=29.46  Aligned_cols=22  Identities=27%  Similarity=0.566  Sum_probs=13.0

Q ss_pred             eeccCcccccchhHHHHHHHHC
Q 031516           69 ELCHLCNRYIRLRERYNHESRC   90 (158)
Q Consensus        69 v~C~~C~~~i~~~~l~~H~~~C   90 (158)
                      +.|+.|+..+....+..|+..|
T Consensus         3 ~~C~~CgR~F~~~~l~~H~~~C   24 (25)
T PF13913_consen    3 VPCPICGRKFNPDRLEKHEKIC   24 (25)
T ss_pred             CcCCCCCCEECHHHHHHHHHhc
Confidence            4566666666555666666555

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.68  E-value=0.038  Score=29.95  Aligned_cols=22  Identities=27%  Similarity=0.744  Sum_probs=14.4

Q ss_pred             cccccCCCCcccchhhhHHhhh
Q 031516           43 VTCDFCEFPLPAVDLAEHQEVC   64 (158)
Q Consensus        43 v~C~~C~~~~~~~~L~~H~~~C   64 (158)
                      +.|+.|+..|....|+.|+..|
T Consensus         3 ~~C~~CgR~F~~~~l~~H~~~C   24 (25)
T PF13913_consen    3 VPCPICGRKFNPDRLEKHEKIC   24 (25)
T ss_pred             CcCCCCCCEECHHHHHHHHHhc
Confidence            4566677666666666666555

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=93.05  E-value=0.032  Score=30.31  Aligned_cols=21  Identities=24%  Similarity=0.561  Sum_probs=11.3

Q ss_pred             hhhHHh-hhcCcceeccCcccc
Q 031516           57 LAEHQE-VCGNRTELCHLCNRY   77 (158)
Q Consensus        57 L~~H~~-~C~~r~v~C~~C~~~   77 (158)
                      |..|+. +.++++..|+.|++.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~   23 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKS   23 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEE
T ss_pred             HHHHhhhcCCCCCCCCCCCcCe
Confidence            445554 555555555555544

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=92.76  E-value=0.093  Score=28.43  Aligned_cols=24  Identities=17%  Similarity=0.380  Sum_probs=19.9

Q ss_pred             HHhhhhhcCCCccccccccCCCCc
Q 031516           29 ILAIHKGENCPQRIVTCDFCEFPL   52 (158)
Q Consensus        29 ~L~~H~~~~C~~R~v~C~~C~~~~   52 (158)
                      +|..|+..+-..+++.|++|++.|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCee
Confidence            367787777889999999999876

...

>KOG3002 consensus Zn finger protein [General function prediction only]

Probab=92.51  E-value=0.069  Score=45.52  Aligned_cols=74  Identities=20%  Similarity=0.402  Sum_probs=52.8

Q ss_pred             ceecCccCChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhHHhhhcCcceecc----CcccccchhHHHH
Q 031516           14 EQVACSQCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQEVCGNRTELCH----LCNRYIRLRERYN   85 (158)
Q Consensus        14 ~~V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H~~~C~~r~v~C~----~C~~~i~~~~l~~   85 (158)
                      ....||.|...+. +-...+++..+....+.|++    |.+.+++.+-..|++.|..++..||    .|+..-...++..
T Consensus        79 ~~~~CP~Cr~~~g-~~R~~amEkV~e~~~vpC~~~~~GC~~~~~Y~~~~~HE~~C~f~~~~CP~p~~~C~~~G~~~~l~~  157 (299)
T KOG3002|consen   79 VSNKCPTCRLPIG-NIRCRAMEKVAEAVLVPCKNAKLGCTKSFPYGEKSKHEKVCEFRPCSCPVPGAECKYTGSYKDLYA  157 (299)
T ss_pred             hcccCCccccccc-cHHHHHHHHHHHhceecccccccCCceeeccccccccccccccCCcCCCCCcccCCccCcHHHHHH
Confidence            4567777877777 33333444456677778874    8888888777888888888888775    5777777778888


Q ss_pred             HHH
Q 031516           86 HES   88 (158)
Q Consensus        86 H~~   88 (158)
                      |..
T Consensus       158 H~~  160 (299)
T KOG3002|consen  158 HLN  160 (299)
T ss_pred             HHH
Confidence            864

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=91.15  E-value=0.13  Score=45.01  Aligned_cols=89  Identities=17%  Similarity=0.326  Sum_probs=61.6

Q ss_pred             cCc--cCChhhh-hhHHhhhhhcCCCccccccccCCCCccc-chhhhHHh---hhcCcceeccCcccccchhH-HHHHHH
Q 031516           17 ACS--QCSETME-REILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE---VCGNRTELCHLCNRYIRLRE-RYNHES   88 (158)
Q Consensus        17 ~C~--~C~~~i~-r~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~---~C~~r~v~C~~C~~~i~~~~-l~~H~~   88 (158)
                      .|.  +|...+. +..|.+|++.+-.++.+.|++|+.-|.. ..|-+|..   .=...+..|..|.+.+.-.. |..|+.
T Consensus       179 ~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~  258 (467)
T KOG3608|consen  179 MCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV  258 (467)
T ss_pred             eccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHH
Confidence            555  5766666 4789999999999999999999998875 56778864   23334678888987766554 335543


Q ss_pred             ------HCCCCCCCCCCCChhhh
Q 031516           89 ------RCTGVPENTVGSSRNVR  105 (158)
Q Consensus        89 ------~Cp~~~~~~~~~s~~~~  105 (158)
                            .||.-...+.-.|+.++
T Consensus       259 rHvn~ykCplCdmtc~~~ssL~~  281 (467)
T KOG3608|consen  259 RHVNCYKCPLCDMTCSSASSLTT  281 (467)
T ss_pred             HhhhcccccccccCCCChHHHHH
Confidence                  47766665555554443

>PHA02768 hypothetical protein; Provisional

Probab=91.02  E-value=0.14  Score=33.21  Aligned_cols=35  Identities=14%  Similarity=0.252  Sum_probs=19.8

Q ss_pred             cCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcc
Q 031516           17 ACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP   53 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~   53 (158)
                      .|+.||+.+.+ ..|..|++.+-  ++..|..|+..+.
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~   42 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISL   42 (55)
T ss_pred             CcchhCCeeccHHHHHHHHHhcC--CcccCCcccceec
Confidence            56666666665 56666665432  3555555655544

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=90.55  E-value=0.15  Score=42.54  Aligned_cols=46  Identities=20%  Similarity=0.517  Sum_probs=36.6

Q ss_pred             ecCccCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHh
Q 031516           16 VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQE   62 (158)
Q Consensus        16 V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~   62 (158)
                      ..|..||+.+....++.|+ ..|+..-+.|-.|+..|.+.+..+|..
T Consensus         4 FtCnvCgEsvKKp~vekH~-srCrn~~fSCIDC~k~F~~~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQVEKHM-SRCRNAYFSCIDCGKTFERVSYKNHTK   49 (276)
T ss_pred             EehhhhhhhccccchHHHH-HhccCCeeEEeecccccccchhhhhhh
Confidence            4677788888888888887 578888888888888888888888863

>PHA00732 hypothetical protein

Probab=90.22  E-value=0.22  Score=34.27  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             cCccCChhhhh-hHHhhhhh-cCCCccccccccCCCCcccchhhhHHh
Q 031516           17 ACSQCSETMER-EILAIHKG-ENCPQRIVTCDFCEFPLPAVDLAEHQE   62 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~-~~C~~R~v~C~~C~~~~~~~~L~~H~~   62 (158)
                      .|..|+..+.. ..|+.|.. .+-+   ..|+.|++.+.  .+..|..
T Consensus         3 ~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~--~l~~H~~   45 (79)
T PHA00732          3 KCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR--RLNQHFY   45 (79)
T ss_pred             cCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC--Chhhhhc
Confidence            58888888875 77888874 2332   46888888776  5777763

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=89.73  E-value=0.27  Score=26.87  Aligned_cols=22  Identities=23%  Similarity=0.427  Sum_probs=15.2

Q ss_pred             eeccCcccccchhHHHHHHHHC
Q 031516           69 ELCHLCNRYIRLRERYNHESRC   90 (158)
Q Consensus        69 v~C~~C~~~i~~~~l~~H~~~C   90 (158)
                      +.||-|++.+....+.+|++.|
T Consensus         2 v~CPiC~~~v~~~~in~HLD~C   23 (26)
T smart00734        2 VQCPVCFREVPENLINSHLDSC   23 (26)
T ss_pred             CcCCCCcCcccHHHHHHHHHHh
Confidence            4677777777666666777766

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>KOG3002 consensus Zn finger protein [General function prediction only]

Probab=89.72  E-value=0.11  Score=44.19  Aligned_cols=83  Identities=19%  Similarity=0.366  Sum_probs=62.8

Q ss_pred             ceecCccCChhhhhhHHhh---hhh-cC-CCccccccccCCCCcccchhhhHHh-hhcCcceecc----CcccccchhHH
Q 031516           14 EQVACSQCSETMEREILAI---HKG-EN-CPQRIVTCDFCEFPLPAVDLAEHQE-VCGNRTELCH----LCNRYIRLRER   83 (158)
Q Consensus        14 ~~V~C~~C~~~i~r~~L~~---H~~-~~-C~~R~v~C~~C~~~~~~~~L~~H~~-~C~~r~v~C~----~C~~~i~~~~l   83 (158)
                      .+..||-|...+..-.++-   |+. .. |......|++|...+. .-...+++ .+....+.|+    +|.+.+...+.
T Consensus        47 ~lleCPvC~~~l~~Pi~QC~nGHlaCssC~~~~~~~CP~Cr~~~g-~~R~~amEkV~e~~~vpC~~~~~GC~~~~~Y~~~  125 (299)
T KOG3002|consen   47 DLLDCPVCFNPLSPPIFQCDNGHLACSSCRTKVSNKCPTCRLPIG-NIRCRAMEKVAEAVLVPCKNAKLGCTKSFPYGEK  125 (299)
T ss_pred             hhccCchhhccCcccceecCCCcEehhhhhhhhcccCCccccccc-cHHHHHHHHHHHhceecccccccCCceeeccccc
Confidence            5668888888877655553   442 22 3488899999999998 55777777 8899999997    79999988888


Q ss_pred             HHHHHHCCCCCCCC
Q 031516           84 YNHESRCTGVPENT   97 (158)
Q Consensus        84 ~~H~~~Cp~~~~~~   97 (158)
                      ..|++.|-..+-.+
T Consensus       126 ~~HE~~C~f~~~~C  139 (299)
T KOG3002|consen  126 SKHEKVCEFRPCSC  139 (299)
T ss_pred             cccccccccCCcCC
Confidence            99999776655433

>PHA00733 hypothetical protein

Probab=89.44  E-value=0.63  Score=34.73  Aligned_cols=71  Identities=15%  Similarity=0.350  Sum_probs=46.3

Q ss_pred             ecCccCChhhhhh-HHh------hhhhcCCCccccccccCCCCccc-chhhhHHhhhcCcceeccCcccccchh-HHHHH
Q 031516           16 VACSQCSETMERE-ILA------IHKGENCPQRIVTCDFCEFPLPA-VDLAEHQEVCGNRTELCHLCNRYIRLR-ERYNH   86 (158)
Q Consensus        16 V~C~~C~~~i~r~-~L~------~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~~C~~r~v~C~~C~~~i~~~-~l~~H   86 (158)
                      ..|..|+..+... .|+      .|+. .=..+++.|+.|++.|.. ..|..|+..- ..+..|+.|++.+... .|..|
T Consensus        41 ~~~~~~~~~~~~~~~l~~~~~l~~~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H  118 (128)
T PHA00733         41 LIRAVVKTLIYNPQLLDESSYLYKLLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDH  118 (128)
T ss_pred             HHHHHHhhhccChhhhcchHHHHhhcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHH
Confidence            3455566555442 222      2322 223678899999999875 6688888621 3467999999887665 57788


Q ss_pred             HH
Q 031516           87 ES   88 (158)
Q Consensus        87 ~~   88 (158)
                      +.
T Consensus       119 ~~  120 (128)
T PHA00733        119 VC  120 (128)
T ss_pred             HH
Confidence            74

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=88.55  E-value=0.32  Score=26.57  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=14.5

Q ss_pred             cccccCCCCcccchhhhHHhhh
Q 031516           43 VTCDFCEFPLPAVDLAEHQEVC   64 (158)
Q Consensus        43 v~C~~C~~~~~~~~L~~H~~~C   64 (158)
                      +.|+-|++.+....++.|.+.|
T Consensus         2 v~CPiC~~~v~~~~in~HLD~C   23 (26)
T smart00734        2 VQCPVCFREVPENLINSHLDSC   23 (26)
T ss_pred             CcCCCCcCcccHHHHHHHHHHh
Confidence            4566677776666677776655

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PHA00733 hypothetical protein

Probab=87.86  E-value=0.53  Score=35.14  Aligned_cols=46  Identities=15%  Similarity=0.245  Sum_probs=36.4

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +..|+.|+..+.. ..|..|....  ..+..|..|++.|.. ..|..|..
T Consensus        73 Py~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         73 PYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             CccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHH
Confidence            5689999999886 7889998643  346899999999876 67888863

>PHA02768 hypothetical protein; Provisional

Probab=87.32  E-value=0.36  Score=31.24  Aligned_cols=35  Identities=14%  Similarity=0.159  Sum_probs=25.0

Q ss_pred             cccccCCCCccc-chhhhHHh-hhcCcceeccCcccccc
Q 031516           43 VTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIR   79 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~   79 (158)
                      +.|+.|++.|.. +.|..|+. +-  .+..|..|++.+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~   42 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISL   42 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceec
Confidence            468888888875 66888887 44  4667777776544

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=86.36  E-value=0.56  Score=41.20  Aligned_cols=45  Identities=20%  Similarity=0.472  Sum_probs=19.0

Q ss_pred             ccccCCCCcc-cchhhhHHh--hhcCcceeccCcccc-cchhHHHHHHH
Q 031516           44 TCDFCEFPLP-AVDLAEHQE--VCGNRTELCHLCNRY-IRLRERYNHES   88 (158)
Q Consensus        44 ~C~~C~~~~~-~~~L~~H~~--~C~~r~v~C~~C~~~-i~~~~l~~H~~   88 (158)
                      +|+.|....+ ++.|..|+.  +-..++.+|..|... +..++|..|+.
T Consensus       265 kCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  265 KCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             cccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH
Confidence            3444444333 234444443  334445555544443 23334444443

>PHA00616 hypothetical protein

Probab=82.95  E-value=0.68  Score=28.62  Aligned_cols=30  Identities=17%  Similarity=0.276  Sum_probs=19.6

Q ss_pred             cCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           17 ACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      +|+.||..+.. ++|..|+...-...+..|+
T Consensus         3 qC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          3 QCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             ccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            57777777775 6777777655555555554

>PHA00732 hypothetical protein

Probab=82.70  E-value=1  Score=30.93  Aligned_cols=41  Identities=24%  Similarity=0.485  Sum_probs=30.8

Q ss_pred             cccccCCCCccc-chhhhHHh--hhcCcceeccCcccccchhHHHHHHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQE--VCGNRTELCHLCNRYIRLRERYNHES   88 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~~--~C~~r~v~C~~C~~~i~~~~l~~H~~   88 (158)
                      +.|+.|++.+.. ..|..|+.  +-+   ..|+.|++.+.  .+..|..
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~--~l~~H~~   45 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR--RLNQHFY   45 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC--Chhhhhc
Confidence            579999999875 77888975  333   47999998876  5677763

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=82.65  E-value=0.47  Score=38.83  Aligned_cols=73  Identities=21%  Similarity=0.333  Sum_probs=54.6

Q ss_pred             cCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcc-cchhhhHHh-h-----------hcCcceeccCcccccchh-
Q 031516           17 ACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQE-V-----------CGNRTELCHLCNRYIRLR-   81 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~-~~~L~~H~~-~-----------C~~r~v~C~~C~~~i~~~-   81 (158)
                      .|..||+-|.- -||..|.+++-.-|++.|..|++.|. +-.|+.|.. .           =-.+...|..||..-.+- 
T Consensus       147 lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e  226 (267)
T KOG3576|consen  147 LCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPE  226 (267)
T ss_pred             HHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChh
Confidence            56779988876 79999999999999999999999987 467887754 1           123456888888665444 


Q ss_pred             HHHHHHHH
Q 031516           82 ERYNHESR   89 (158)
Q Consensus        82 ~l~~H~~~   89 (158)
                      ....|++.
T Consensus       227 ~~~~h~~~  234 (267)
T KOG3576|consen  227 VYYLHLKL  234 (267)
T ss_pred             HHHHHHHh
Confidence            35577764

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=81.81  E-value=0.7  Score=38.71  Aligned_cols=46  Identities=22%  Similarity=0.413  Sum_probs=42.7

Q ss_pred             cccccCCCCcccchhhhHHhhhcCcceeccCcccccchhHHHHHHH
Q 031516           43 VTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHES   88 (158)
Q Consensus        43 v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~~C~~~i~~~~l~~H~~   88 (158)
                      ..|..|+..+....++.|+..|+..-+.|-.|+..+-+.+-.+|.+
T Consensus         4 FtCnvCgEsvKKp~vekH~srCrn~~fSCIDC~k~F~~~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQVEKHMSRCRNAYFSCIDCGKTFERVSYKNHTK   49 (276)
T ss_pred             EehhhhhhhccccchHHHHHhccCCeeEEeecccccccchhhhhhh
Confidence            5799999999999999999999999999999999999988889975

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=81.69  E-value=1.4  Score=29.78  Aligned_cols=70  Identities=17%  Similarity=0.229  Sum_probs=17.2

Q ss_pred             cCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCcceeccCcccccch-hHHHHHHHH
Q 031516           17 ACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRL-RERYNHESR   89 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~~C~~~i~~-~~l~~H~~~   89 (158)
                      +|..|+..+.. .+|..|+...-..........   .....+..+...--.....|..|++.+.. ..+..|+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYL---VDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccccccccc---ccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            47788888765 777888754443322211111   12233334443333336899999998754 468899975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	158
2d9k_A	75	Solution Structure Of The Zf-Traf Domain Of Fln29 G		1e-06

>pdb|2D9K|A Chain A, Solution Structure Of The Zf-Traf Domain Of Fln29 Gene Product Length = 75

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 33 HKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 90
          H+   CP R+  C  C+  L  + L EH++ CG RTELC  C R + +++   H   C
Sbjct: 8  HEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 65

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	158
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	6e-21
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	6e-04
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	9e-12
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	4e-04
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	6e-09
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	8e-05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	1e-04

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 80.4 bits (198), Expect = 6e-21
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 28 EILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHE 87
             + H+   CP R+  C  C+  L  + L EH++ CG RTELC  C R + +++   H 
Sbjct: 3  SGSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHP 62

Query: 88 SRC 90
            C
Sbjct: 63 EVC 65

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 35.7 bits (82), Expect = 6e-04
 Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
             C  C   +    L  H+ + C  R   C  C   +   DL  H EVCG    
Sbjct: 17 LAVCQHCDLELSILKLKEHE-DYCGARTELCGNCGRNVLVKDLKTHPEVCGREGS 70

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens} Length = 76

 Score = 56.5 bits (136), Expect = 9e-12
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 13 FEQVACS-QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELC 71
          F  + C  +C   + R  L  H   +CP+R + C+FC           H+ +C   +   
Sbjct: 14 FNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESSGP 73

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens} Length = 76

 Score = 36.4 bits (84), Expect = 4e-04
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 5/68 (7%)

Query: 36  ENCPQRIVTCDF-CEFPLPAVDLAEH-QEVCGNRTELCHLCNRYIRLRERYNHESRCTGV 93
             C   ++ C   C   L   DL  H Q  C  R   C  C          +HE  C   
Sbjct: 10  NTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMC--- 66

Query: 94  PENTVGSS 101
           P+ + G S
Sbjct: 67  PQESSGPS 74

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens} Length = 170

 Score = 51.2 bits (122), Expect = 6e-09
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 13  FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
           F  + C QC    ++  + IH  ++CP+R V+CD C   +   D   H + C    E  H
Sbjct: 108 FALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLALEHHH 167

Query: 73  LC 74
             
Sbjct: 168 HH 169

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens} Length = 170

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 2/80 (2%)

Query: 18  CSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEH-QEVCGNRTELCHLCNR 76
              C   ME   L      +C   ++ C  C+ P     +  H  + C  R   C  C  
Sbjct: 87  NEGCLHKMELRHLE-DHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAA 145

Query: 77  YIRLRERYNHESRCTGVPEN 96
            +   ++  H+  C    E+
Sbjct: 146 SMAFEDKEIHDQNCPLALEH 165

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 66

 Score = 37.2 bits (86), Expect = 1e-04
 Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 1/48 (2%)

Query: 36 ENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELC-HLCNRYIRLRE 82
           +  +R   C +C        +  HQ  C      C + C      RE
Sbjct: 4  GSSGKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVARE 51

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	158
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.5
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	99.45
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	99.28
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	99.28
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.86
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	98.86
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.71
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.58
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.56
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.46
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.45
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.38
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.36
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.36
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.28
2yre_A	100	F-box only protein 30; zinc binding, E3 ubiquitin	98.24
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.21
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.2
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.14
2yre_A	100	F-box only protein 30; zinc binding, E3 ubiquitin	98.12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.1
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.1
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.1
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.03
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.02
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.0
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	97.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	97.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	97.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	97.8
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	97.76
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	97.67
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	97.67
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	97.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	97.58
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	97.53
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	97.52
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	97.51
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	97.46
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	97.46
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	97.43
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	97.41
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	97.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.4
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	97.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	97.36
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	97.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.3
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	97.27
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	97.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.19
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	97.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	97.17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	97.09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.07
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.0
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	97.0
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	96.98
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.97
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	96.94
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	96.86
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.84
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.84
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	96.83
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.83
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.79
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.78
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.77
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.77
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.76
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.75
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.72
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	96.71
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.71
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.7
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	96.7
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.69
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.69
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	96.69
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.66
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.65
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	96.62
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.62
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.6
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.6
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	96.6
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	96.59
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.58
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.58
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.57
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.57
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.55
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.54
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.53
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	96.53
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.53
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.53
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.51
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.51
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.49
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	96.48
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.47
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.46
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.45
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	96.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	96.44
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	96.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	96.4
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.4
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.38
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	96.36
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	96.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.32
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	96.29
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.29
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	96.28
2epa_A	72	Krueppel-like factor 10; transforming growth facto	96.12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	96.12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.11
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	96.05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	96.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	96.0
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	96.0
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.98
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.97
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.9
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.87
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.82
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	95.81
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.77
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.76
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	95.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	95.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.75
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.75
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.72
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.69
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.68
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.68
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.65
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.64
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.63
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	95.63
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.62
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	95.61
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	95.59
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.57
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.57
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.57
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.57
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	95.56
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.55
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.55
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.55
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	95.54
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	95.51
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.51
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.48
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	95.48
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.46
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.44
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.38
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.36
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	95.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	95.3
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	95.29
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	95.22
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	95.22
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	95.13
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	95.11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.1
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.03
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	95.02
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.99
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.96
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.96
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	94.96
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.95
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.95
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.93
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.92
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	94.92
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	94.92
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.91
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	94.9
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	94.9
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.88
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	94.82
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.8
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	94.8
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.8
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.75
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.74
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	94.73
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.68
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.64
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.63
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.62
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.6
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.59
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.54
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.49
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.48
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.48
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.45
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.42
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.37
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.3
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	94.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.27
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.27
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	94.19
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.19
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	94.16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	94.04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.99
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.88
2a25_A	193	Ubiquitin ligase SIAH1; protein-peptide complex, l	93.58
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.55
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.53
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.53
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	93.46
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	93.44
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	93.24
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.93
2a25_A	193	Ubiquitin ligase SIAH1; protein-peptide complex, l	92.43
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	92.4
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	92.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	91.93
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	91.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	91.7
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	91.4
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	91.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	91.11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	91.0
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	91.0
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	90.98
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	90.91
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	90.79
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.71
1rmd_A	116	RAG1; V(D)J recombination, antibody, MAD, ring fin	90.7
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.62
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	90.56
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	90.53
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	90.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.45
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	90.29
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	90.27
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	90.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	90.23
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	90.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	90.14
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	90.12
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	90.12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	89.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	89.88
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	89.87
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	89.68
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	89.58
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.58
3vhs_A	29	ATPase wrnip1; zinc finger, ubiquitin-binding doma	89.57
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	89.54
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	89.51
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.44
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.37
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	89.36
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	89.33
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	89.26
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	89.24
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	89.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	89.06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	88.97
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	88.95
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.7
2l7x_A	77	Envelope glycoprotein; cytoplasmic tail, viral pro	88.67
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	88.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	88.41
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	88.34
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	88.28
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	88.24
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	88.19
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	88.16
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	88.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	88.0
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	87.8
1ard_A	29	Yeast transcription factor ADR1; transcription reg	87.56
2l7x_A	77	Envelope glycoprotein; cytoplasmic tail, viral pro	87.23
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	87.19
3vhs_A	29	ATPase wrnip1; zinc finger, ubiquitin-binding doma	86.81
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	86.79
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	86.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	86.53
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	86.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.78
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	85.73
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	85.53
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	85.33
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	85.28
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	85.18
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	85.02
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.8
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.71
2lo3_A	44	SAGA-associated factor 73; zinc-finger, deubiquiti	84.52
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	84.3
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.98
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	84.4
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.91
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	84.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	83.52
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	83.51
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	80.76
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	81.68
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	80.62
1paa_A	30	Yeast transcription factor ADR1; transcription reg	80.32

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.4e-15  Score=100.94  Aligned_cols=70  Identities=30%  Similarity=0.677  Sum_probs=65.3

Q ss_pred             hhHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCcceeccCcccccchhHHHHHHHHCCCCCCC
Q 031516           27 REILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPEN   96 (158)
Q Consensus        27 r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~~C~~~i~~~~l~~H~~~Cp~~~~~   96 (158)
                      +.+|+.|+..+|++|++.|++|+..|...+|+.|+.+|+++++.|+.|++.+.+++|..|+++|+..+.+
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~~~~~~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVCGREGSG   71 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCEEETTGGGTHHHHBTTBSSS
T ss_pred             chHHHhhCcccCCCcccCCcccChHhhHHHHHHHHhHcCCCceEcccCCCcCcHHHHHHHHHHccCCcCC
Confidence            4678999988999999999999999999999999999999999999999999999999999999997653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=99.45  E-value=1.3e-14  Score=97.49  Aligned_cols=64  Identities=22%  Similarity=0.602  Sum_probs=46.0

Q ss_pred             hcCccceecCc-cCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCcceecc
Q 031516            9 SLHAFEQVACS-QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH   72 (158)
Q Consensus         9 ~y~~y~~V~C~-~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~   72 (158)
                      .-|+|.+|.|+ +|++.|.|++|++|+.++|++|++.|+||+..+.+.+|+.|++.||.+++.|+
T Consensus        10 ~~C~~~~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~~~~l~~H~~~Cp~~~v~C~   74 (76)
T 2yuc_A           10 NTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESSGPS   74 (76)
T ss_dssp             CCCCCSCCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCCHHHHHHTTTSCTTSSCCCS
T ss_pred             HHCCCcccCCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccCHHHHHHHHhHCCCCccCCC
Confidence            45677777774 67777777777777765777777777777777777777777777777777775

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=99.28  E-value=2.3e-12  Score=98.24  Aligned_cols=79  Identities=23%  Similarity=0.508  Sum_probs=72.8

Q ss_pred             ceecCc--cCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHh-hhcCcceeccCcccccchhHHHHHHHHC
Q 031516           14 EQVACS--QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQE-VCGNRTELCHLCNRYIRLRERYNHESRC   90 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~-~C~~r~v~C~~C~~~i~~~~l~~H~~~C   90 (158)
                      ..|.|+  +|++.+.+.+++.|+ ..|+++++.|+.|+..+.+.+|..|.+ .|+.+++.|++|+..+.+.++..|+++|
T Consensus        81 l~v~C~n~GC~~~~~~~~l~~H~-~~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~~l~~H~~~~  159 (170)
T 3hcs_A           81 LMVKCPNEGCLHKMELRHLEDHQ-AHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNC  159 (170)
T ss_dssp             SEEECCSTTCCCEEEGGGHHHHH-TTCTTSEEECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEEGGGHHHHHTTC
T ss_pred             cccCCCCCCCCceecHhHHHHHH-hcCCceeeECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccCHHHHHhHHHhC
Confidence            356785  999999999999998 699999999999999999999999996 9999999999999999999999999988


Q ss_pred             CCC
Q 031516           91 TGV   93 (158)
Q Consensus        91 p~~   93 (158)
                      ...
T Consensus       160 ~~~  162 (170)
T 3hcs_A          160 PLA  162 (170)
T ss_dssp             CC-
T ss_pred             cCh
Confidence            664

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=99.28  E-value=8.1e-13  Score=88.55  Aligned_cols=70  Identities=21%  Similarity=0.426  Sum_probs=65.4

Q ss_pred             hHHhhhhhcCCCcccccc-ccCCCCcccchhhhHHh-hhcCcceeccCcccccchhHHHHHHHHCCCCCCCCC
Q 031516           28 EILAIHKGENCPQRIVTC-DFCEFPLPAVDLAEHQE-VCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTV   98 (158)
Q Consensus        28 ~~L~~H~~~~C~~R~v~C-~~C~~~~~~~~L~~H~~-~C~~r~v~C~~C~~~i~~~~l~~H~~~Cp~~~~~~~   98 (158)
                      .+|+.|+ ..|+++++.| ..|+..+.+.+|++|+. .|+.+++.|++|+..+.+.+|..|.++||..++++.
T Consensus         3 ~~l~~H~-~~C~~~~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~~~~l~~H~~~Cp~~~v~C~   74 (76)
T 2yuc_A            3 SGSSGHL-NTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESSGPS   74 (76)
T ss_dssp             CSCSCCC-CCCCCSCCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCCHHHHHHTTTSCTTSSCCCS
T ss_pred             hHHHHHH-HHCCCcccCCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccCHHHHHHHHhHCCCCccCCC
Confidence            5688998 7999999999 58999999999999998 999999999999999999999999999999998764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=4.2e-10  Score=75.02  Aligned_cols=63  Identities=24%  Similarity=0.437  Sum_probs=57.0

Q ss_pred             chhhhcCccceecCccCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCcc
Q 031516            5 DFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRT   68 (158)
Q Consensus         5 ~~~~~y~~y~~V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~   68 (158)
                      +|=..-|+++++.|+.|+..|...+|+.|+ ..|+.+++.|++|++.+.+.+|..|+..|+..+
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~~~~L~~H~-~~c~~~~~~C~~C~~~~~~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELSILKLKEHE-DYCGARTELCGNCGRNVLVKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEECHHHHHHHH-HHHHHCEEECSSSCCEEETTGGGTHHHHBTTBS
T ss_pred             hhCcccCCCcccCCcccChHhhHHHHHHHH-hHcCCCceEcccCCCcCcHHHHHHHHHHccCCc
Confidence            444456899999999999999999999999 799999999999999999999999999898764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=98.86  E-value=7e-10  Score=84.33  Aligned_cols=60  Identities=28%  Similarity=0.610  Sum_probs=55.3

Q ss_pred             chhhhcCccceecCccCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhhhHHhhhc
Q 031516            5 DFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCG   65 (158)
Q Consensus         5 ~~~~~y~~y~~V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~   65 (158)
                      +| ...|+|.++.|++|++.+.+.+|+.|+..+|++|++.|++|+..+.+.+|++|++.|.
T Consensus       101 ~H-~~~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~~l~~H~~~~~  160 (170)
T 3hcs_A          101 DH-QAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCP  160 (170)
T ss_dssp             HH-HTTCTTSEEECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEEGGGHHHHHTTCC
T ss_pred             HH-HhcCCceeeECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccCHHHHHhHHHhCc
Confidence            44 4789999999999999999999999998899999999999999999999999998543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.4e-09  Score=65.83  Aligned_cols=59  Identities=19%  Similarity=0.337  Sum_probs=46.5

Q ss_pred             cCCCccccccccCCCCcccchhhhHHhhhcCcceecc-Ccccccchh-HHHHHHHH-CCCCC
Q 031516           36 ENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH-LCNRYIRLR-ERYNHESR-CTGVP   94 (158)
Q Consensus        36 ~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r~v~C~-~C~~~i~~~-~l~~H~~~-Cp~~~   94 (158)
                      ++|+++++.|.+|++.|....|..|+..++++++.|+ .|++.+..+ +|..|+.. |+..+
T Consensus         4 ~~C~~~~~~C~~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            4 GSSGKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SCCCCCEEECSSSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             ccCCCCCeeccccCCccCHHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4788888888888888887778888777888888888 888875544 78888875 77664

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.2e-08  Score=63.06  Aligned_cols=59  Identities=22%  Similarity=0.454  Sum_probs=52.4

Q ss_pred             cCccceecCccCChhhhhhHHhhhhhcCCCccccccc-cCCCCccc-chhhhHHh-hhcCcce
Q 031516           10 LHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCD-FCEFPLPA-VDLAEHQE-VCGNRTE   69 (158)
Q Consensus        10 y~~y~~V~C~~C~~~i~r~~L~~H~~~~C~~R~v~C~-~C~~~~~~-~~L~~H~~-~C~~r~v   69 (158)
                      -|+..+..|+.|+..+....|..|+.. +..+++.|+ .|++.|.. .+|..|+. +|+.+++
T Consensus         5 ~C~~~~~~C~~C~k~f~~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFVFDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCCCEEECSSSCCEEEHHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             cCCCCCeeccccCCccCHHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            367789999999999998899999987 999999999 99999765 68999998 7998864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.56  E-value=1e-07  Score=64.03  Aligned_cols=78  Identities=19%  Similarity=0.357  Sum_probs=65.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+. +-+.++..|+.|++.+... +|..|++.
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            34679999999885 789999988878889999999999875 77999988 7788899999999987665 68899875


Q ss_pred             CC
Q 031516           90 CT   91 (158)
Q Consensus        90 Cp   91 (158)
                      -.
T Consensus        87 h~   88 (96)
T 2dmd_A           87 HT   88 (96)
T ss_dssp             CC
T ss_pred             hc
Confidence            43

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.46  E-value=2.6e-07  Score=63.22  Aligned_cols=77  Identities=19%  Similarity=0.364  Sum_probs=65.3

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHC
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      ...|+.|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+. +-+.++..|..|++.+... +|..|+...
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   96 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH   96 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHh
Confidence            4579999999885 789999877777889999999999875 78999988 7888899999999987665 688999865


Q ss_pred             C
Q 031516           91 T   91 (158)
Q Consensus        91 p   91 (158)
                      .
T Consensus        97 ~   97 (106)
T 2ee8_A           97 M   97 (106)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.45  E-value=1.3e-07  Score=61.36  Aligned_cols=74  Identities=19%  Similarity=0.485  Sum_probs=62.5

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+. +-+.++..|+.|++.+... +|..|++.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            468899999875 788999876667789999999999875 78999988 8889999999999987665 67799864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.38  E-value=6.2e-07  Score=59.96  Aligned_cols=76  Identities=18%  Similarity=0.374  Sum_probs=64.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcC--cceeccCcccccchh-HHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGN--RTELCHLCNRYIRLR-ERYNHE   87 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~--r~v~C~~C~~~i~~~-~l~~H~   87 (158)
                      ....|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+. +-+.  .+..|+.|++.+... .|..|+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI   85 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence            45689999999986 789999987778889999999999875 77999988 6665  789999999987765 688998


Q ss_pred             HH
Q 031516           88 SR   89 (158)
Q Consensus        88 ~~   89 (158)
                      +.
T Consensus        86 ~~   87 (95)
T 2yt9_A           86 KQ   87 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.36  E-value=2.2e-07  Score=68.01  Aligned_cols=77  Identities=18%  Similarity=0.263  Sum_probs=65.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|++.+... .|..|++.
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            34689999999886 799999877777889999999999875 78999998 8899999999999987765 68899875


Q ss_pred             C
Q 031516           90 C   90 (158)
Q Consensus        90 C   90 (158)
                      -
T Consensus       101 h  101 (133)
T 2lt7_A          101 V  101 (133)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.36  E-value=2.2e-07  Score=64.06  Aligned_cols=76  Identities=20%  Similarity=0.401  Sum_probs=64.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+..| .|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+. +-+..+..|+.|++.+... .|..|+..
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            45689 89999886 789999887777889999999999875 77999988 7888899999999987755 68899876


Q ss_pred             C
Q 031516           90 C   90 (158)
Q Consensus        90 C   90 (158)
                      +
T Consensus        88 ~   88 (110)
T 2csh_A           88 C   88 (110)
T ss_dssp             H
T ss_pred             c
Confidence            5

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.28  E-value=5e-07  Score=59.71  Aligned_cols=75  Identities=23%  Similarity=0.430  Sum_probs=63.3

Q ss_pred             eecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           15 QVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        15 ~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      +..|+  .|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+. +-+.++..|+.|++.+... .|..|+.
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   83 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK   83 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHG
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHH
Confidence            56787  69999886 789999876667788999999999875 77999988 7889999999999987765 6789987


Q ss_pred             H
Q 031516           89 R   89 (158)
Q Consensus        89 ~   89 (158)
                      .
T Consensus        84 ~   84 (90)
T 1a1h_A           84 I   84 (90)
T ss_dssp             G
T ss_pred             H
Confidence            5

>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.24  E-value=4.7e-07  Score=64.29  Aligned_cols=59  Identities=17%  Similarity=0.387  Sum_probs=46.7

Q ss_pred             CCCccccccc-cCCCCcccchhhhHHhhhcCcceecc----CcccccchhHHHHHHHHCCCCCCCC
Q 031516           37 NCPQRIVTCD-FCEFPLPAVDLAEHQEVCGNRTELCH----LCNRYIRLRERYNHESRCTGVPENT   97 (158)
Q Consensus        37 ~C~~R~v~C~-~C~~~~~~~~L~~H~~~C~~r~v~C~----~C~~~i~~~~l~~H~~~Cp~~~~~~   97 (158)
                      .|.  ++.|+ .|+..|.+.+|++|+..||+.++.|+    +|...+.|.+|.+|++.||...+.+
T Consensus        34 ~C~--~i~CP~~Cga~i~rckL~EH~~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas~v~~   97 (100)
T 2yre_A           34 SCD--LIGCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPASVSGP   97 (100)
T ss_dssp             CCC--EEECTTCCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGGCCCC
T ss_pred             eee--eeeCCcccCCeeehhhHHHHHhhcccccccccccCcCCceeecHHHHHHHHhhCCceeEec
Confidence            565  77787 68888888888888888888888886    6888888888888888888766543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.21  E-value=1.5e-06  Score=59.80  Aligned_cols=73  Identities=18%  Similarity=0.398  Sum_probs=61.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHhhhcCcceeccCcccccchh-HHHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQEVCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      .+..|+.|+..+.. ..|..|+...  .+++.|..|++.|.. ..|..|+.+.++++..|..|++.+... .|..|++
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHH
Confidence            35689999999876 7889998654  478999999999875 778999888889999999999987765 6889997

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.3e-06  Score=60.52  Aligned_cols=79  Identities=15%  Similarity=0.185  Sum_probs=62.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhc--CCCcccc-ccccCCCCc---ccchhhhHHh-hhcCcceeccCcccccchh-HHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGE--NCPQRIV-TCDFCEFPL---PAVDLAEHQE-VCGNRTELCHLCNRYIRLR-ERY   84 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~--~C~~R~v-~C~~C~~~~---~~~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~   84 (158)
                      .+..|+.|+..+.. ..|..|+..  .-..++. .|..|+..|   ....|..|+. +-++++..|+.|++.+... .|.
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~   97 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLS   97 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHH
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHH
Confidence            56789999999886 789999865  4333443 499999987   3578999987 7889999999999987766 688


Q ss_pred             HHHHHCCC
Q 031516           85 NHESRCTG   92 (158)
Q Consensus        85 ~H~~~Cp~   92 (158)
                      .|+..-..
T Consensus        98 ~H~~~hh~  105 (115)
T 2dmi_A           98 VHMIKTKH  105 (115)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHHhCC
Confidence            99876443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.19  E-value=3e-06  Score=58.88  Aligned_cols=73  Identities=22%  Similarity=0.386  Sum_probs=37.9

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh----hhcCcceeccCcccccchh-HHHHHHH
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE----VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~----~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      ..|+.|+..+.. ..|..|+...-..+++.|+.|+..|.. ..|..|+.    .-...+..|+.|++.+... .|..|+.
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV   87 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            355556655543 455555554445555566666655543 44555554    1334455566665554433 3445554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.14  E-value=2.7e-06  Score=55.99  Aligned_cols=75  Identities=23%  Similarity=0.473  Sum_probs=62.8

Q ss_pred             eecCcc--CChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHH
Q 031516           15 QVACSQ--CSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNH   86 (158)
Q Consensus        15 ~V~C~~--C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H   86 (158)
                      ...|+.  |+..+.. ..|..|+...-..+++.|++  |+..+.. ..|..|+. +-+..+..|+.|++.+... +|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH   84 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHH
Confidence            457886  9999875 79999998888889999985  9999875 77999988 8899999999999987655 67789


Q ss_pred             HHH
Q 031516           87 ESR   89 (158)
Q Consensus        87 ~~~   89 (158)
                      +..
T Consensus        85 ~~~   87 (89)
T 2wbs_A           85 MKR   87 (89)
T ss_dssp             GGG
T ss_pred             HHh
Confidence            753

>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.12  E-value=1.3e-06  Score=62.01  Aligned_cols=68  Identities=24%  Similarity=0.488  Sum_probs=57.8

Q ss_pred             Cccchhhh------cCccceecCc-cCChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhHHhhhcCccee
Q 031516            2 CFDDFCYS------LHAFEQVACS-QCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQEVCGNRTEL   70 (158)
Q Consensus         2 ~~~~~~~~------y~~y~~V~C~-~C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H~~~C~~r~v~   70 (158)
                      ||+-.|..      =|  .++.|+ .|+..+.|.+|++|+. .||+-.+.|.+    |...+.+.+|.+|++.||...+-
T Consensus        20 C~~~~C~~~~~~~~~C--~~i~CP~~Cga~i~rckL~EH~~-~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas~v~   96 (100)
T 2yre_A           20 CVSRRCMTRPEPGISC--DLIGCPLVCGAVFHSCKADEHRL-LCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPASVSG   96 (100)
T ss_dssp             CCCTTCCCCCCTTTCC--CEEECTTCCSCEEEHHHHHHHHH-HCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGGCCC
T ss_pred             hcccccCCCCCCCCee--eeeeCCcccCCeeehhhHHHHHh-hcccccccccccCcCCceeecHHHHHHHHhhCCceeEe
Confidence            66666653      45  378999 8999999999999995 69999999985    99999999999999999988776


Q ss_pred             cc
Q 031516           71 CH   72 (158)
Q Consensus        71 C~   72 (158)
                      |.
T Consensus        97 ~~   98 (100)
T 2yre_A           97 PS   98 (100)
T ss_dssp             CC
T ss_pred             cC
Confidence            63

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.10  E-value=2.7e-06  Score=59.09  Aligned_cols=78  Identities=21%  Similarity=0.416  Sum_probs=64.4

Q ss_pred             cceecCccCChhhhh-hHHhhhhhc---CCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHH
Q 031516           13 FEQVACSQCSETMER-EILAIHKGE---NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYN   85 (158)
Q Consensus        13 y~~V~C~~C~~~i~r-~~L~~H~~~---~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~   85 (158)
                      -.+..|+.|+..+.. ..|..|+..   .-..+++.|..|++.|.. ..|..|+. +-+.++..|+.|++.+... +|..
T Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  112 (124)
T 2dlq_A           33 EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQS  112 (124)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHH
T ss_pred             CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHH
Confidence            356789999999875 789999863   346678999999999875 77999998 7889999999999987765 6889


Q ss_pred             HHHHC
Q 031516           86 HESRC   90 (158)
Q Consensus        86 H~~~C   90 (158)
                      |+..-
T Consensus       113 H~~~~  117 (124)
T 2dlq_A          113 HMIKL  117 (124)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            98743

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.10  E-value=1.9e-06  Score=59.58  Aligned_cols=75  Identities=21%  Similarity=0.419  Sum_probs=52.6

Q ss_pred             eecCc--cCChhhhh-hHHhhhhhcCCCccccccc--cCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHH
Q 031516           15 QVACS--QCSETMER-EILAIHKGENCPQRIVTCD--FCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNH   86 (158)
Q Consensus        15 ~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~--~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H   86 (158)
                      +..|+  +|+..+.. ..|..|+...-..+++.|.  .|+..|.. ..|..|+. +-+..+..|+.|++.+... .|..|
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   85 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH   85 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHH
Confidence            45676  38887764 6777777655566777887  58887764 66778876 6777778888888776544 56677


Q ss_pred             HHH
Q 031516           87 ESR   89 (158)
Q Consensus        87 ~~~   89 (158)
                      +..
T Consensus        86 ~~~   88 (119)
T 2jp9_A           86 TRT   88 (119)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.10  E-value=1.5e-06  Score=65.37  Aligned_cols=76  Identities=17%  Similarity=0.414  Sum_probs=55.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|++.|.. ..|..|+. +-+.++..|+.|++.+... +|..|+..
T Consensus        76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  155 (190)
T 2i13_A           76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT  155 (190)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            35678888888764 677888766666777888888888764 56888877 6777888888888776655 56677754

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.03  E-value=4.3e-06  Score=62.84  Aligned_cols=73  Identities=25%  Similarity=0.511  Sum_probs=36.6

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      ..|+.|+..+.. ..|..|+...-..+++.|+.|+..|.. ..|..|+. +.+..+..|+.|++.+... .|..|+.
T Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   98 (190)
T 2i13_A           22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR   98 (190)
T ss_dssp             ---------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH
Confidence            456666666654 456666655555666666666666653 55666665 5566666666666654433 4556654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.02  E-value=5.4e-07  Score=60.05  Aligned_cols=75  Identities=16%  Similarity=0.294  Sum_probs=61.6

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHhhhcCcceeccCcccccchh-HHHHHHHH
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQEVCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +..|+.|+..+.. ..|..|+...-..+++.|+.|++.|.. ..|..|+..--..+..|+.|++.+... .|..|++.
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            5689999999876 789999877777889999999999875 789999873335789999999887665 57789864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.00  E-value=6e-06  Score=55.41  Aligned_cols=75  Identities=20%  Similarity=0.404  Sum_probs=62.3

Q ss_pred             eecCc--cCChhhhh-hHHhhhhhcCCCccccccc--cCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHH
Q 031516           15 QVACS--QCSETMER-EILAIHKGENCPQRIVTCD--FCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNH   86 (158)
Q Consensus        15 ~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~--~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H   86 (158)
                      ...|.  .|+..+.. ..|..|+...-..+++.|.  .|++.|.. ..|..|+. +-+.++..|+.|++.+... .|..|
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   94 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH   94 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHH
Confidence            45677  59999875 7899998877778899997  49999875 77999988 8889999999999987665 67799


Q ss_pred             HHH
Q 031516           87 ESR   89 (158)
Q Consensus        87 ~~~   89 (158)
                      ++.
T Consensus        95 ~~~   97 (100)
T 2ebt_A           95 MKR   97 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=97.93  E-value=7.7e-06  Score=52.24  Aligned_cols=51  Identities=25%  Similarity=0.468  Sum_probs=43.0

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHC
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      ++++.|..|++.|.. ..|..|+. +-++++..|..|++.+... .|..|+++-
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            578999999999875 77999988 8999999999999987765 677998754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=97.92  E-value=9e-06  Score=56.73  Aligned_cols=74  Identities=20%  Similarity=0.429  Sum_probs=56.5

Q ss_pred             eecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccC--cccccchh-HHHHH
Q 031516           15 QVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHL--CNRYIRLR-ERYNH   86 (158)
Q Consensus        15 ~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~--C~~~i~~~-~l~~H   86 (158)
                      ...|+  .|+..+.. ..|..|+... ..+++.|..|+..|.. ..|..|+. +-+..+..|+.  |++.+... .|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            45787  78888875 6888888655 6778889999988864 67888887 67778888974  88877655 57788


Q ss_pred             HHH
Q 031516           87 ESR   89 (158)
Q Consensus        87 ~~~   89 (158)
                      +..
T Consensus        84 ~~~   86 (124)
T 1ubd_C           84 VRI   86 (124)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=97.88  E-value=1.4e-05  Score=55.80  Aligned_cols=77  Identities=19%  Similarity=0.396  Sum_probs=65.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceecc--Ccccccchh-HHHH
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCH--LCNRYIRLR-ERYN   85 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~--~C~~~i~~~-~l~~   85 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|.+  |++.|.. ..|..|+. +-+.++..|+  .|++.+... .|..
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  112 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS  112 (124)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHH
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHH
Confidence            45789999999886 79999998888889999986  9999875 78999988 8889999996  599987665 6889


Q ss_pred             HHHHC
Q 031516           86 HESRC   90 (158)
Q Consensus        86 H~~~C   90 (158)
                      |+..-
T Consensus       113 H~~~H  117 (124)
T 1ubd_C          113 HILTH  117 (124)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=97.80  E-value=1.5e-05  Score=54.96  Aligned_cols=75  Identities=19%  Similarity=0.423  Sum_probs=63.7

Q ss_pred             ceecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec--cCcccccchh-HHHH
Q 031516           14 EQVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC--HLCNRYIRLR-ERYN   85 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C--~~C~~~i~~~-~l~~   85 (158)
                      .+..|+  .|+..+.. ..|..|+...-..+++.|+.|++.|.. ..|..|+. +-+..+..|  +.|++.+... +|..
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  114 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR  114 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHH
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHH
Confidence            456898  79999886 789999877777889999999999875 78999988 888999999  7999987765 6889


Q ss_pred             HHH
Q 031516           86 HES   88 (158)
Q Consensus        86 H~~   88 (158)
                      |++
T Consensus       115 H~~  117 (119)
T 2jp9_A          115 HHN  117 (119)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.76  E-value=1.8e-05  Score=51.00  Aligned_cols=64  Identities=20%  Similarity=0.423  Sum_probs=52.3

Q ss_pred             eecCc--cCChhhhh-hHHhhhhh-cCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceeccCccccc
Q 031516           15 QVACS--QCSETMER-EILAIHKG-ENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYI   78 (158)
Q Consensus        15 ~V~C~--~C~~~i~r-~~L~~H~~-~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i   78 (158)
                      ...|.  .|+..+.. ..|..|+. ..-..+++.|+.  |++.|.. ..|..|+. +-++++..|..|++.+
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            34565  59999885 78999986 466778899998  9999875 77999988 8889999999998765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.73  E-value=2.3e-05  Score=50.69  Aligned_cols=71  Identities=18%  Similarity=0.399  Sum_probs=57.4

Q ss_pred             ecC--ccCChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceeccC---cccccchh-HHH
Q 031516           16 VAC--SQCSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCHL---CNRYIRLR-ERY   84 (158)
Q Consensus        16 V~C--~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~~---C~~~i~~~-~l~   84 (158)
                      ..|  +.|+..+.. ..|..|+...-..+++.|+.  |++.|.. ..|..|+. +-+   ..|..   |++.+... .|.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            368  789999875 78999987767788999998  9999875 77999987 554   88988   99887655 678


Q ss_pred             HHHHH
Q 031516           85 NHESR   89 (158)
Q Consensus        85 ~H~~~   89 (158)
                      .|++.
T Consensus        79 ~H~~~   83 (85)
T 2j7j_A           79 KHVAE   83 (85)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.67  E-value=1.8e-05  Score=51.11  Aligned_cols=50  Identities=24%  Similarity=0.472  Sum_probs=36.6

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+++.|..|++.|.. ..|..|+. +-+.++..|+.|++.+... .|..|+..
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   68 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV   68 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHH
Confidence            467788888888764 66778877 6777788888888776655 56678765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.67  E-value=5.1e-05  Score=48.95  Aligned_cols=66  Identities=12%  Similarity=0.145  Sum_probs=50.0

Q ss_pred             HhhhhhcCCCccccccccCCCCccc-chhhhHHh--hhcC-cceeccCcccccchh-HHHHHHHHCCCCCC
Q 031516           30 LAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE--VCGN-RTELCHLCNRYIRLR-ERYNHESRCTGVPE   95 (158)
Q Consensus        30 L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~--~C~~-r~v~C~~C~~~i~~~-~l~~H~~~Cp~~~~   95 (158)
                      +..|+...-..+++.|+.|++.|.. ..|..|+.  +-.. ++..|+.|++.+... .|..|+..-.....
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            3456666667789999999999875 78999985  4443 789999999987765 68899986544433

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.64  E-value=6.4e-05  Score=54.16  Aligned_cols=67  Identities=18%  Similarity=0.425  Sum_probs=39.6

Q ss_pred             CChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceeccC--cccccchh-HHHHHH
Q 031516           21 CSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCHL--CNRYIRLR-ERYNHE   87 (158)
Q Consensus        21 C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~~--C~~~i~~~-~l~~H~   87 (158)
                      |+..+.. ..|..|+...-..+++.|.+  |++.|.. ..|..|+. +-+.++..|+.  |++.+... +|..|+
T Consensus        45 c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           45 ELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHH
T ss_pred             hhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            3454443 56666665555556666764  7666654 55666665 55666667765  76665443 466665

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.61  E-value=4.2e-05  Score=52.57  Aligned_cols=64  Identities=19%  Similarity=0.226  Sum_probs=49.1

Q ss_pred             hHHhhhhhcCCCccccccccCCCCc-c-cchhhhHHh-hhcCcceeccCcccccchh-HHHHH-HHHCCC
Q 031516           28 EILAIHKGENCPQRIVTCDFCEFPL-P-AVDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNH-ESRCTG   92 (158)
Q Consensus        28 ~~L~~H~~~~C~~R~v~C~~C~~~~-~-~~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H-~~~Cp~   92 (158)
                      ..+..|....-..+++.|+.|++.| . ...|..|+. + ++++..|..|++.+... .|..| +.....
T Consensus        20 ~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           20 SLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            3444444333456789999999999 4 688999998 7 99999999999998765 68899 766543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.58  E-value=0.00013  Score=47.32  Aligned_cols=64  Identities=16%  Similarity=0.309  Sum_probs=48.4

Q ss_pred             HhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcC----cceeccCcccccchh-HHHHHHHHCCCC
Q 031516           30 LAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGN----RTELCHLCNRYIRLR-ERYNHESRCTGV   93 (158)
Q Consensus        30 L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~----r~v~C~~C~~~i~~~-~l~~H~~~Cp~~   93 (158)
                      +..|+...-..+++.|..|++.|.. ..|..|+. +-..    .+..|..|++.+... .|..|+..+...
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence            4556665666788999999999875 67889976 4544    679999999887655 677999876554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=97.53  E-value=0.00011  Score=44.27  Aligned_cols=50  Identities=18%  Similarity=0.327  Sum_probs=37.3

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+++.|..|++.|.. ..|..|+. +-+.++..|+.|++.+... .|..|+..
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            357788899988875 67888887 7788889999999886655 57788753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=97.52  E-value=4e-05  Score=55.48  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=58.5

Q ss_pred             eecCccCChhhhh-hHHhhhhhc-CCCccc--------cccccCCCCccc-chhhhHHh-hhcCcceeccC--cccccch
Q 031516           15 QVACSQCSETMER-EILAIHKGE-NCPQRI--------VTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHL--CNRYIRL   80 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~-~C~~R~--------v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~--C~~~i~~   80 (158)
                      ...|+.|+..+.. ..|..|+.. .-...+        +.|..|+..|.. ..|..|+. +-+.++..|..  |++.+..
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            4578899999886 788999865 333222        689999999875 67899987 77888999987  9988765


Q ss_pred             h-HHHHHHHHC
Q 031516           81 R-ERYNHESRC   90 (158)
Q Consensus        81 ~-~l~~H~~~C   90 (158)
                      . .|..|+..-
T Consensus       105 ~~~L~~H~~~h  115 (155)
T 2rpc_A          105 SENLKIHKRTH  115 (155)
T ss_dssp             HHHHHHHHTTT
T ss_pred             HHHHHHHHHhh
Confidence            5 677998754

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=97.51  E-value=0.00012  Score=52.88  Aligned_cols=74  Identities=19%  Similarity=0.376  Sum_probs=62.1

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh-hhcCcceeccC--cccccchh-HHHHHH
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCHL--CNRYIRLR-ERYNHE   87 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~~--C~~~i~~~-~l~~H~   87 (158)
                      ..|+.|+..+.. ..|..|+...-..+++.|.+  |++.|.. ..|..|+. +-+.++..|..  |++.+... .|..|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence            479999999875 78999987666778999998  9999875 78999998 78889999996  99987765 577998


Q ss_pred             HH
Q 031516           88 SR   89 (158)
Q Consensus        88 ~~   89 (158)
                      ..
T Consensus       143 ~~  144 (155)
T 2rpc_A          143 HV  144 (155)
T ss_dssp             TT
T ss_pred             HH
Confidence            64

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.46  E-value=7.4e-05  Score=48.55  Aligned_cols=64  Identities=19%  Similarity=0.350  Sum_probs=51.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCc----cccccccCCCCccc-chhhhHHh-hhcCcceeccCcccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQ----RIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRY   77 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~----R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~   77 (158)
                      .+..|+.|+..+.. ..|..|+......    +++.|..|++.|.. ..|..|+. +-+..+..|..|+..
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            45789999999986 7899997655443    68999999999875 78999998 677788899888653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=97.46  E-value=3.1e-05  Score=49.35  Aligned_cols=49  Identities=18%  Similarity=0.332  Sum_probs=43.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++..|..|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+.
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC
Confidence            46789999999986 799999988888999999999999985 78999986

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.44  E-value=0.00017  Score=45.56  Aligned_cols=51  Identities=18%  Similarity=0.406  Sum_probs=38.6

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ..+++.|..|++.|.. ..|..|+. +-..++..|+.|++.+... .|..|+..
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~   59 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK   59 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHH
Confidence            3567888888888764 67888887 6777888888888877655 57788764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.43  E-value=0.00015  Score=49.31  Aligned_cols=54  Identities=13%  Similarity=0.285  Sum_probs=44.1

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHC
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      .-+.+...|+.|++.|.. ..|..|+. +-++++..|..|++.+... .|..|++..
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~   79 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKC   79 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCccc
Confidence            345667889999999885 78999987 7899999999999997766 577997644

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=97.41  E-value=0.00011  Score=54.94  Aligned_cols=69  Identities=17%  Similarity=0.341  Sum_probs=35.6

Q ss_pred             ccCChhhhh-hHHhhhhhcCCCcccccc--ccCCCCccc-chhhhHHh-hhcCcceecc--Ccccccchh-HHHHHH
Q 031516           19 SQCSETMER-EILAIHKGENCPQRIVTC--DFCEFPLPA-VDLAEHQE-VCGNRTELCH--LCNRYIRLR-ERYNHE   87 (158)
Q Consensus        19 ~~C~~~i~r-~~L~~H~~~~C~~R~v~C--~~C~~~~~~-~~L~~H~~-~C~~r~v~C~--~C~~~i~~~-~l~~H~   87 (158)
                      +.|+..+.. ..|..|+...-..+++.|  +.|++.|.. ..|..|+. +-+.++..|.  .|++.+... .|..|+
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   94 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF   94 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHH
Confidence            355555543 455555544444455555  456555543 44555555 4455555555  555554433 344555

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.41  E-value=0.00017  Score=45.86  Aligned_cols=52  Identities=19%  Similarity=0.309  Sum_probs=42.1

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHC
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      ..+++.|+.|++.|.. ..|..|+. +-..++..|+.|++.+... .|..|++.-
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            4578899999999875 67889987 7888899999999887655 577898753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.40  E-value=0.00027  Score=45.43  Aligned_cols=53  Identities=19%  Similarity=0.353  Sum_probs=42.5

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhc---CcceeccCcccccchh-HHHHHHHHCC
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCG---NRTELCHLCNRYIRLR-ERYNHESRCT   91 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~---~r~v~C~~C~~~i~~~-~l~~H~~~Cp   91 (158)
                      ..+++.|..|++.|.. ..|..|+. +.+   .++..|..|++.+... .|..|+..-.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            3578899999999875 67999987 664   7899999999987765 5779986443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.40  E-value=0.00026  Score=43.13  Aligned_cols=48  Identities=25%  Similarity=0.468  Sum_probs=34.5

Q ss_pred             cccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      +++.|+.|++.|.. ..|..|+. +.+..+..|+.|++.+... .|..|+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            35678888887764 66778876 6777788888888776654 5667864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.38  E-value=0.00015  Score=49.27  Aligned_cols=61  Identities=15%  Similarity=0.205  Sum_probs=48.7

Q ss_pred             HHhhhhhcCCCccccccccCCCCcc--cchhhhHHh-hhc-CcceeccCcccccchh-HHHHHHHH
Q 031516           29 ILAIHKGENCPQRIVTCDFCEFPLP--AVDLAEHQE-VCG-NRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        29 ~L~~H~~~~C~~R~v~C~~C~~~~~--~~~L~~H~~-~C~-~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .++.|+...-..+++.|..|++.|.  ...|..|+. +-. .++..|..|++.+... .|..|+..
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHH
Confidence            3455665555678999999999996  478999988 666 7899999999998766 58899864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.36  E-value=0.00012  Score=46.32  Aligned_cols=55  Identities=27%  Similarity=0.648  Sum_probs=45.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRT   68 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~   68 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+. +-++++
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45689999999886 799999988888899999999999875 77999987 555544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.36  E-value=0.00026  Score=45.16  Aligned_cols=51  Identities=20%  Similarity=0.414  Sum_probs=41.6

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ..+++.|..|++.|.. ..|..|+. +-+.++..|..|++.+... .|..|+..
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh
Confidence            3577889999999875 67889987 7888899999999887665 57789865

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.34  E-value=9.9e-05  Score=53.13  Aligned_cols=74  Identities=19%  Similarity=0.296  Sum_probs=52.0

Q ss_pred             ecCccCChhhhh-hHHhhhhh---cCCCccccccccC-----CCCccc-chhhhHHh-hhcCcceecc--Ccccccchh-
Q 031516           16 VACSQCSETMER-EILAIHKG---ENCPQRIVTCDFC-----EFPLPA-VDLAEHQE-VCGNRTELCH--LCNRYIRLR-   81 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~---~~C~~R~v~C~~C-----~~~~~~-~~L~~H~~-~C~~r~v~C~--~C~~~i~~~-   81 (158)
                      ..|+.|+..+.. ..|..|+.   ..-..+++.|++|     +..|.. ..|..|+. +-+.++..|+  .|++.+... 
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            357788888875 78888875   3445667777653     355553 66888877 7778888887  488876655 


Q ss_pred             HHHHHHHH
Q 031516           82 ERYNHESR   89 (158)
Q Consensus        82 ~l~~H~~~   89 (158)
                      .|..|+..
T Consensus        84 ~l~~H~~~   91 (155)
T 2gli_A           84 NLKTHLRS   91 (155)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            57788765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.30  E-value=0.00026  Score=42.54  Aligned_cols=47  Identities=19%  Similarity=0.334  Sum_probs=29.2

Q ss_pred             cccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +.|..|++.|.. ..|..|+. +-+.++..|+.|++.+... .|..|+..
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            456667666653 55666665 5666667777777665544 45667653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.27  E-value=0.0001  Score=47.14  Aligned_cols=55  Identities=20%  Similarity=0.469  Sum_probs=45.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRT   68 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~   68 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+. +-++++
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            34579999999986 789999887778899999999999875 77999987 555543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=97.27  E-value=0.00022  Score=53.31  Aligned_cols=75  Identities=16%  Similarity=0.363  Sum_probs=41.4

Q ss_pred             eecC--ccCChhhhh-hHHhhhhhcCCCccccccc--cCCCCccc-chhhhHH-h-h-hcCcceec--cCcccccchh-H
Q 031516           15 QVAC--SQCSETMER-EILAIHKGENCPQRIVTCD--FCEFPLPA-VDLAEHQ-E-V-CGNRTELC--HLCNRYIRLR-E   82 (158)
Q Consensus        15 ~V~C--~~C~~~i~r-~~L~~H~~~~C~~R~v~C~--~C~~~~~~-~~L~~H~-~-~-C~~r~v~C--~~C~~~i~~~-~   82 (158)
                      +..|  +.|+..+.. ..|..|+...-..+++.|+  .|+..|.. ..|..|+ . + -+..+..|  +.|++.+... .
T Consensus        42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~  121 (190)
T 1tf6_A           42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ  121 (190)
T ss_dssp             SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHH
T ss_pred             CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHH
Confidence            3456  456666654 5666666555555666666  56666543 4566665 2 2 23445666  5566655433 4


Q ss_pred             HHHHHHH
Q 031516           83 RYNHESR   89 (158)
Q Consensus        83 l~~H~~~   89 (158)
                      |..|+..
T Consensus       122 L~~H~~~  128 (190)
T 1tf6_A          122 LKVHQFS  128 (190)
T ss_dssp             HHHHHGG
T ss_pred             HHHHHHH
Confidence            5566543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.19  E-value=0.00018  Score=43.36  Aligned_cols=47  Identities=21%  Similarity=0.551  Sum_probs=40.8

Q ss_pred             ecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           16 VACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        16 V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ..|+.|+..+.. ..|..|+...-..+++.|+.|+..|.. ..|..|+.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH
Confidence            368899999886 789999988888899999999999875 77899986

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.17  E-value=0.00017  Score=48.95  Aligned_cols=48  Identities=17%  Similarity=0.366  Sum_probs=42.2

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ...|+.|+..|.. ..|..|+...-..+++.|++|++.|.. ..|..|++
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   77 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHIN   77 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHH
T ss_pred             CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCc
Confidence            3579999999986 899999988888999999999999975 77999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.17  E-value=0.00033  Score=46.43  Aligned_cols=56  Identities=16%  Similarity=0.176  Sum_probs=33.4

Q ss_pred             cCccCChhhhh-hHHhhhhhc-CCCccc--------cccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           17 ACSQCSETMER-EILAIHKGE-NCPQRI--------VTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        17 ~C~~C~~~i~r-~~L~~H~~~-~C~~R~--------v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      .|+.|+..+.. ..|..|+.. +-..++        +.|..|++.|.. ..|..|+. +-++++..|.
T Consensus        27 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            36667766664 566666654 444444        567777766654 55666665 5666666653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.17  E-value=0.00034  Score=44.91  Aligned_cols=58  Identities=17%  Similarity=0.385  Sum_probs=49.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45689999999986 799999988888899999999999875 77999987 777777665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.09  E-value=0.00023  Score=45.27  Aligned_cols=49  Identities=22%  Similarity=0.474  Sum_probs=42.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+.
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            46789999999986 789999888888899999999999875 67999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.07  E-value=0.00027  Score=43.08  Aligned_cols=47  Identities=21%  Similarity=0.457  Sum_probs=40.7

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHH
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +..|+.|+..+.. ..|..|+...-..+++.|+.|+..|.. ..|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            3579999999886 899999988888899999999999875 7789996

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.07  E-value=0.00034  Score=47.88  Aligned_cols=48  Identities=25%  Similarity=0.432  Sum_probs=41.7

Q ss_pred             ceecCccCChhh-h-hhHHhhhhhcCCCccccccccCCCCccc-chhhhH-Hh
Q 031516           14 EQVACSQCSETM-E-REILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEH-QE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i-~-r~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H-~~   62 (158)
                      .+..|+.|+..+ . ...|..|+... ..+++.|..|++.|.. ..|..| +.
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~   84 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMA   84 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHH
Confidence            456899999999 4 58999999877 8899999999999986 789999 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.04  E-value=0.00056  Score=43.23  Aligned_cols=61  Identities=16%  Similarity=0.237  Sum_probs=44.1

Q ss_pred             hHHhhhhhc-CCCccccccc--cCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           28 EILAIHKGE-NCPQRIVTCD--FCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        28 ~~L~~H~~~-~C~~R~v~C~--~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      ..+..|... .-..+++.|+  .|++.|.. ..|..|+. +-+.++..|+.|++.+... .|..|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            344444322 3356789997  49999875 77999987 7889999999999987765 5778875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.00  E-value=0.00065  Score=44.66  Aligned_cols=49  Identities=22%  Similarity=0.457  Sum_probs=41.8

Q ss_pred             cccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +++.|..|++.|.. ..|..|+. +-+..+..|+.|++.+... .|..|+..
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   53 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI   53 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            67899999999875 78999988 8899999999999987665 67799864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=97.00  E-value=0.00019  Score=43.21  Aligned_cols=48  Identities=27%  Similarity=0.554  Sum_probs=40.0

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+.
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            4679999999886 789999877777889999999999875 67888875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=96.98  E-value=0.00068  Score=45.74  Aligned_cols=57  Identities=18%  Similarity=0.314  Sum_probs=47.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCccee
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTEL   70 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~   70 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+. +-+..+..
T Consensus        44 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           44 RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            45789999999986 799999988888899999999999875 78999987 66655543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.97  E-value=0.00071  Score=41.89  Aligned_cols=50  Identities=12%  Similarity=0.266  Sum_probs=36.3

Q ss_pred             ccccccccCCCCccc-chhhhHHhh---hcCcceeccCcccccchh-HHHHHHHH
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQEV---CGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~~---C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      .+++.|+.|++.|.. ..|..|+..   -+.++..|+.|++.+... .|..|+..
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH
Confidence            467788888888764 668888752   467788888888876655 57788754

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=96.94  E-value=0.00024  Score=51.61  Aligned_cols=59  Identities=17%  Similarity=0.206  Sum_probs=47.5

Q ss_pred             hhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           31 AIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        31 ~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +.|....-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|++.+... .|..|+..
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   72 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH   72 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc
Confidence            334433446788999999999875 78999998 8899999999999987765 67799864

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.86  E-value=0.00034  Score=49.00  Aligned_cols=48  Identities=21%  Similarity=0.367  Sum_probs=24.1

Q ss_pred             CccccccccCCCCccc-chhhhHHh--h---hcCcceeccCcccccchh-HHHHH
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE--V---CGNRTELCHLCNRYIRLR-ERYNH   86 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~--~---C~~r~v~C~~C~~~i~~~-~l~~H   86 (158)
                      ..+++.|..|++.|.. ..|..|+.  +   -++++..|..|++.+... .|..|
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTH
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHH
Confidence            3445555555555543 44555553  2   234555555555554433 34455

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=96.84  E-value=0.00066  Score=39.24  Aligned_cols=42  Identities=14%  Similarity=0.215  Sum_probs=32.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444455778899999999876 67889987 778888888765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.84  E-value=0.00061  Score=42.19  Aligned_cols=49  Identities=16%  Similarity=0.369  Sum_probs=40.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhc-C-CCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGE-N-CPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~-~-C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+.|+..+.. ..|..|+.. . -..+++.|+.|++.|.. ..|..|+.
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            45689999999986 789999865 4 47789999999999876 67888875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.83  E-value=0.00023  Score=48.35  Aligned_cols=57  Identities=16%  Similarity=0.254  Sum_probs=46.0

Q ss_pred             ceecCccCChhhh-h-hHHhhhhhcCCC-ccccccccCCCCccc-chhhhHHh-hhcCccee
Q 031516           14 EQVACSQCSETME-R-EILAIHKGENCP-QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTEL   70 (158)
Q Consensus        14 ~~V~C~~C~~~i~-r-~~L~~H~~~~C~-~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~   70 (158)
                      ....|+.|+..+. . ..|..|+...-. .+++.|.+|++.|.. ..|..|+. +-+.++..
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4568999999997 5 789999876555 789999999999986 78999986 67666544

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=0.00072  Score=38.90  Aligned_cols=42  Identities=17%  Similarity=0.155  Sum_probs=32.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-+.++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444455678899999999875 77889987 778888888766

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=96.79  E-value=0.0011  Score=38.35  Aligned_cols=42  Identities=12%  Similarity=0.137  Sum_probs=33.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444456788999999999875 77899987 788888888766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.78  E-value=0.00063  Score=39.27  Aligned_cols=42  Identities=14%  Similarity=0.173  Sum_probs=32.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444455788899999999875 77889987 788888888766

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.77  E-value=0.00078  Score=38.74  Aligned_cols=42  Identities=17%  Similarity=0.237  Sum_probs=32.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-+.++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444455778899999999875 67888987 777888888766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.77  E-value=0.00062  Score=39.28  Aligned_cols=42  Identities=14%  Similarity=0.183  Sum_probs=32.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444455678889999998875 67888887 778888888765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.76  E-value=0.00064  Score=39.23  Aligned_cols=42  Identities=17%  Similarity=0.213  Sum_probs=32.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4444456778899999998875 67888987 778888888766

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.00066  Score=39.24  Aligned_cols=42  Identities=14%  Similarity=0.140  Sum_probs=32.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4444455788899999999875 67889987 788888888766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.72  E-value=0.0008  Score=38.70  Aligned_cols=42  Identities=14%  Similarity=0.134  Sum_probs=31.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445678889999988875 67888887 777888888765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=0.00081  Score=38.69  Aligned_cols=42  Identities=12%  Similarity=0.207  Sum_probs=31.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4444445678889999988875 67888887 677888888765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=0.0009  Score=38.56  Aligned_cols=42  Identities=14%  Similarity=0.197  Sum_probs=31.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4444455778889999988875 67888887 777888888765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=0.00067  Score=39.05  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=31.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444455678889999988875 67888887 777888888766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=96.70  E-value=0.00056  Score=39.39  Aligned_cols=42  Identities=14%  Similarity=0.131  Sum_probs=30.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444445677888888888775 67888876 677777787755

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.69  E-value=0.0011  Score=38.27  Aligned_cols=42  Identities=14%  Similarity=0.146  Sum_probs=32.9

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445678999999999876 77899987 788888888766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.69  E-value=0.0011  Score=38.16  Aligned_cols=42  Identities=12%  Similarity=0.169  Sum_probs=31.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445678899999999875 67888987 778888888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.69  E-value=0.0011  Score=38.18  Aligned_cols=42  Identities=12%  Similarity=0.202  Sum_probs=31.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3333445678889999998875 67888887 777888888765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=96.66  E-value=0.0012  Score=38.02  Aligned_cols=42  Identities=14%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4444445678889999988875 67888887 777888888765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.65  E-value=0.0013  Score=37.91  Aligned_cols=42  Identities=17%  Similarity=0.207  Sum_probs=31.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3334445678889999998875 67888887 778888888766

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.63  E-value=0.00094  Score=38.40  Aligned_cols=42  Identities=17%  Similarity=0.317  Sum_probs=30.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444445678888888888875 67888887 777788888765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=96.62  E-value=0.0016  Score=45.53  Aligned_cols=61  Identities=18%  Similarity=0.400  Sum_probs=47.9

Q ss_pred             hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHCC
Q 031516           28 EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRCT   91 (158)
Q Consensus        28 ~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~Cp   91 (158)
                      ..|..|+ ..-..+++.|..|++.|.. ..|..|+. +  ..+..|+.|++.+... .|..|+..-.
T Consensus        61 ~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           61 SYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             HHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             HHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            4556665 3445789999999999876 67999988 5  7889999999998766 5789987543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.62  E-value=0.00078  Score=38.83  Aligned_cols=42  Identities=14%  Similarity=0.204  Sum_probs=32.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444455788899999999875 67889987 788888888766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.60  E-value=0.001  Score=38.32  Aligned_cols=42  Identities=14%  Similarity=0.221  Sum_probs=30.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4434445678888888888775 67888877 777778888765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.60  E-value=0.00093  Score=38.50  Aligned_cols=42  Identities=17%  Similarity=0.260  Sum_probs=32.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444445678899999999875 67889987 778888888765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.60  E-value=0.00075  Score=38.83  Aligned_cols=42  Identities=12%  Similarity=0.093  Sum_probs=30.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4434445677888888888775 67888877 677778888765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=96.60  E-value=0.001  Score=38.25  Aligned_cols=42  Identities=14%  Similarity=0.144  Sum_probs=30.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-+.++..|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444445678888888888875 67888877 777788888765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.59  E-value=0.0011  Score=44.99  Aligned_cols=51  Identities=16%  Similarity=0.335  Sum_probs=43.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHhhh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQEVC   64 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~~C   64 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+..+
T Consensus        36 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   88 (110)
T 2csh_A           36 RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSC   88 (110)
T ss_dssp             CSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHc
Confidence            56789999999986 799999988888889999999999875 7799998643

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.58  E-value=0.00066  Score=39.16  Aligned_cols=42  Identities=17%  Similarity=0.235  Sum_probs=30.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445678888888888775 67888877 777788888765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.58  E-value=0.0012  Score=37.60  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=28.2

Q ss_pred             CCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           38 CPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        38 C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      -..+++.|+.|++.|.. ..|..|+. +-++++..|..|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34577888888888875 67888877 677788888765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.57  E-value=0.00074  Score=38.85  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=30.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445678888888888875 67888887 777788888765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.57  E-value=0.0014  Score=37.86  Aligned_cols=42  Identities=12%  Similarity=0.132  Sum_probs=30.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3334445678888888888875 67888887 777788888765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.55  E-value=0.00093  Score=38.42  Aligned_cols=42  Identities=19%  Similarity=0.165  Sum_probs=29.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4434445677888888888765 67888876 677777777765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.54  E-value=0.0012  Score=37.99  Aligned_cols=42  Identities=19%  Similarity=0.180  Sum_probs=31.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444445678889999998875 67888887 778888888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=96.53  E-value=0.0013  Score=37.87  Aligned_cols=42  Identities=14%  Similarity=0.229  Sum_probs=31.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4434445678889999988875 67888887 778888888755

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=96.53  E-value=0.0023  Score=42.13  Aligned_cols=52  Identities=15%  Similarity=0.216  Sum_probs=43.1

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHC
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      ..+++.|..|++.|.. ..|..|+. +-...+..|+.|++.+... .|..|+..-
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   59 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH   59 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHh
Confidence            3567899999999875 77999988 7778899999999987665 677998764

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.53  E-value=0.0011  Score=38.10  Aligned_cols=42  Identities=14%  Similarity=0.162  Sum_probs=30.2

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3333445677888888888775 67888877 777778888765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.53  E-value=0.001  Score=38.41  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=29.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3333445677888888888765 67888877 677777777765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.51  E-value=0.0011  Score=38.12  Aligned_cols=42  Identities=12%  Similarity=0.169  Sum_probs=31.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4444455678889999988875 67888887 777888888755

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.51  E-value=0.0011  Score=38.26  Aligned_cols=42  Identities=14%  Similarity=0.177  Sum_probs=30.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444445677888888888775 67888877 677777777655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.49  E-value=0.001  Score=38.32  Aligned_cols=42  Identities=17%  Similarity=0.167  Sum_probs=29.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4334445677888888888775 66888876 677777777655

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=96.48  E-value=0.00082  Score=43.78  Aligned_cols=49  Identities=18%  Similarity=0.459  Sum_probs=41.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|+..|.. ..|..|+.
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   83 (90)
T 1a1h_A           33 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK   83 (90)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHG
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHH
Confidence            45689999999886 789999877777889999999999875 77999986

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.47  E-value=0.0012  Score=38.02  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=29.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4434445677888888888765 66888876 667777777765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.46  E-value=0.0014  Score=37.73  Aligned_cols=42  Identities=14%  Similarity=0.228  Sum_probs=30.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4434445678888888888875 67888887 777788888755

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.45  E-value=0.0012  Score=38.00  Aligned_cols=42  Identities=12%  Similarity=0.143  Sum_probs=29.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4433445677888888888775 67888877 677777777654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=96.45  E-value=0.003  Score=40.20  Aligned_cols=48  Identities=17%  Similarity=0.367  Sum_probs=39.5

Q ss_pred             ccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ++.|..|++.|.. ..|..|+. +-+..+..|+.|++.+... .|..|+..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI   51 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH
Confidence            3579999999875 77999988 7788999999999887655 67789764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.44  E-value=0.00059  Score=43.78  Aligned_cols=49  Identities=20%  Similarity=0.442  Sum_probs=40.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCC---ccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCP---QRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~---~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++..|..|+..+.. ..|..|+...-.   .+++.|..|++.|.. ..|..|+.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            45689999999986 789999866553   688999999999875 67999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=96.43  E-value=0.004  Score=40.88  Aligned_cols=52  Identities=17%  Similarity=0.348  Sum_probs=43.0

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHHHCC
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHESRCT   91 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~Cp   91 (158)
                      .+++.|..|++.|.. ..|..|+. +-+..+..|+.|++.+... .|..|+....
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   59 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD   59 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhc
Confidence            567899999999875 77999988 6788899999999887665 6889987643

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.40  E-value=0.0015  Score=41.72  Aligned_cols=49  Identities=16%  Similarity=0.398  Sum_probs=40.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhh-cCCCc-cccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKG-ENCPQ-RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~-~~C~~-R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+.|+..+.. ..|..|+. ..-.. +++.|+.|++.|.. ..|..|+.
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHH
Confidence            45789999999986 89999975 34443 78999999999875 77999986

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.40  E-value=0.0018  Score=37.28  Aligned_cols=38  Identities=18%  Similarity=0.170  Sum_probs=30.1

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      .-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            345678889999998875 67888987 788888888766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.38  E-value=0.0011  Score=38.11  Aligned_cols=42  Identities=14%  Similarity=0.220  Sum_probs=29.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444445677888888888765 66788876 677777777765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.37  E-value=0.0015  Score=37.56  Aligned_cols=42  Identities=12%  Similarity=0.146  Sum_probs=29.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3333445677888888888765 67888876 677777777765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.36  E-value=0.00099  Score=38.99  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=23.2

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceeccCccc
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNR   76 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~   76 (158)
                      .+++.|..|++.|.. ..|..|+. +-++++..|..|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            455667677666654 55666665 56666667766653

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.33  E-value=0.0024  Score=38.32  Aligned_cols=39  Identities=15%  Similarity=0.230  Sum_probs=21.2

Q ss_pred             ccccccccCCCCccc-chhhhHHh--hhcCcceeccCccccc
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE--VCGNRTELCHLCNRYI   78 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~--~C~~r~v~C~~C~~~i   78 (158)
                      .+++.|+.|++.|.. ..|..|+.  +-.+++..|..|++.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F   51 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP   51 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            345556666665543 44555642  4455556666665544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.32  E-value=0.0013  Score=37.85  Aligned_cols=42  Identities=14%  Similarity=0.184  Sum_probs=30.2

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3333445677888888888775 67888877 777788888765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.29  E-value=0.0016  Score=37.33  Aligned_cols=37  Identities=11%  Similarity=0.187  Sum_probs=28.8

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCcc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCN   75 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~   75 (158)
                      ..+++.|..|++.|.. ..|..|+. +-+.++..|+.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4567888888888764 67888887 7788888888775

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.29  E-value=0.0011  Score=38.20  Aligned_cols=42  Identities=17%  Similarity=0.219  Sum_probs=27.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3333345567778888877764 56777776 666777777655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=96.28  E-value=0.0022  Score=36.96  Aligned_cols=38  Identities=16%  Similarity=0.170  Sum_probs=27.8

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      .-..+++.|+.|++.|.. ..|..|+. +-++++..|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344677888888888765 66888877 677777777765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=96.12  E-value=0.0037  Score=39.25  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             Ccccccccc--CCCCccc-chhhhHHh-hhcCcceecc--Ccccccchh-HHHHHHH
Q 031516           39 PQRIVTCDF--CEFPLPA-VDLAEHQE-VCGNRTELCH--LCNRYIRLR-ERYNHES   88 (158)
Q Consensus        39 ~~R~v~C~~--C~~~~~~-~~L~~H~~-~C~~r~v~C~--~C~~~i~~~-~l~~H~~   88 (158)
                      ..++..|.+  |++.|.. ..|..|+. +.++++..|.  .|++.+... .|..|++
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            456778888  9988864 67888887 7888889995  599887665 5668864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=96.12  E-value=0.0014  Score=41.34  Aligned_cols=49  Identities=22%  Similarity=0.427  Sum_probs=40.7

Q ss_pred             ceecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+  .|+..+.. ..|..|+...-..+++.|+.|++.|.. ..|..|+.
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            356797  69999886 789999877777889999999999875 67888874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.11  E-value=0.0024  Score=36.68  Aligned_cols=41  Identities=15%  Similarity=0.212  Sum_probs=28.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccC
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHL   73 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~   73 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4434445677888888888775 66888876 67777777754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=96.05  E-value=0.0032  Score=44.00  Aligned_cols=47  Identities=17%  Similarity=0.311  Sum_probs=40.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+.|+..+.. ..|..|+..+  .+++.|..|++.|.. ..|..|+.
T Consensus        73 ~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~  121 (129)
T 2wbt_A           73 SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC  121 (129)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHH
Confidence            45689999999986 7899998766  788999999999976 67999986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.05  E-value=0.0029  Score=36.89  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=32.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEF   50 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~   50 (158)
                      .+..|+.|+..+.. ..|..|+..+-..+++.|..|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            35679999999986 79999998888889999999975

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.00  E-value=0.004  Score=35.69  Aligned_cols=42  Identities=12%  Similarity=0.103  Sum_probs=28.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh--hhcCcceeccCc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE--VCGNRTELCHLC   74 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~--~C~~r~v~C~~C   74 (158)
                      |+...-..+++.|..|++.|.. ..|..|+.  +-++++..|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3333445677888888888775 66788865  566677777655

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=96.00  E-value=0.0023  Score=43.40  Aligned_cols=57  Identities=21%  Similarity=0.338  Sum_probs=46.8

Q ss_pred             eecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh--hhcCcceecc
Q 031516           15 QVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE--VCGNRTELCH   72 (158)
Q Consensus        15 ~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~--~C~~r~v~C~   72 (158)
                      +..|+.|+..+.. ..|..|+. .-..+++.|..|++.|.. ..|..|+.  +-++++..|.
T Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            4689999999886 78999985 778899999999999875 78999985  6666666653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.98  E-value=0.0035  Score=36.03  Aligned_cols=41  Identities=15%  Similarity=0.246  Sum_probs=29.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccC
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHL   73 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~   73 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4444445678888888888875 67888877 77777777764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.97  E-value=0.0044  Score=35.43  Aligned_cols=40  Identities=15%  Similarity=0.174  Sum_probs=30.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444455678889999998875 67888887 7777787775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.90  E-value=0.0045  Score=35.47  Aligned_cols=40  Identities=18%  Similarity=0.260  Sum_probs=30.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4444455678899999999875 67888887 7777777775

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.87  E-value=0.0051  Score=35.29  Aligned_cols=36  Identities=11%  Similarity=0.113  Sum_probs=29.5

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      ..+++.|+.|++.|.. ..|..|+. +-++++..|+.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4578899999999875 77889987 788888888766

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.83  E-value=0.0039  Score=35.81  Aligned_cols=40  Identities=18%  Similarity=0.190  Sum_probs=29.2

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4444455678888888888875 67888877 7777777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.82  E-value=0.0054  Score=35.10  Aligned_cols=40  Identities=13%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4444445678889889888875 67888887 6777777775

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.81  E-value=0.00037  Score=43.59  Aligned_cols=52  Identities=15%  Similarity=0.268  Sum_probs=25.3

Q ss_pred             HhhhhhcCCCccccccccCCCCccc-chhhhHHhhhcCcceeccCcccccchh-HHHHHH
Q 031516           30 LAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQEVCGNRTELCHLCNRYIRLR-ERYNHE   87 (158)
Q Consensus        30 L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~~C~~r~v~C~~C~~~i~~~-~l~~H~   87 (158)
                      |..|+...-..+++.|+.|++.|.. ..|..      ..+..|+.|++.+... .|..|+
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~   59 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDE   59 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCS
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHH
Confidence            4445444444555666666655543 22332      4455566565554433 344444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.77  E-value=0.0056  Score=35.11  Aligned_cols=40  Identities=15%  Similarity=0.260  Sum_probs=29.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4444455678889999998875 67888887 7777777774

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.76  E-value=0.0054  Score=34.60  Aligned_cols=40  Identities=13%  Similarity=0.154  Sum_probs=28.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4444445678888888888875 67888876 6667776663

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=95.76  E-value=0.0048  Score=34.52  Aligned_cols=33  Identities=18%  Similarity=0.260  Sum_probs=22.7

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      ..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4567778888877765 56777776 566666665

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.76  E-value=0.0036  Score=42.78  Aligned_cols=46  Identities=17%  Similarity=0.367  Sum_probs=39.4

Q ss_pred             cCccCChhh--h-hhHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           17 ACSQCSETM--E-REILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        17 ~C~~C~~~i--~-r~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .|+.|+..+  . ...|..|+...-..+++.|+.|++.|.. ..|..|+.
T Consensus        52 ~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~  101 (115)
T 2dmi_A           52 TDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI  101 (115)
T ss_dssp             CCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHH
T ss_pred             cCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHH
Confidence            488999887  4 4789999888888899999999999985 78999986

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.75  E-value=0.0046  Score=35.39  Aligned_cols=40  Identities=18%  Similarity=0.270  Sum_probs=28.9

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444445678888889888875 67888887 6777777774

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.75  E-value=0.0047  Score=35.37  Aligned_cols=40  Identities=18%  Similarity=0.332  Sum_probs=29.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444445678888888888875 67888887 7777777774

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.72  E-value=0.0058  Score=35.03  Aligned_cols=40  Identities=15%  Similarity=0.241  Sum_probs=28.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3333445677888888888875 67888877 6777777775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.69  E-value=0.0044  Score=34.99  Aligned_cols=39  Identities=15%  Similarity=0.282  Sum_probs=25.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4333445667778888877764 66777776 566666665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.68  E-value=0.0061  Score=34.86  Aligned_cols=40  Identities=15%  Similarity=0.243  Sum_probs=29.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4444445678889999988875 67888887 6777777774

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=95.68  E-value=0.0051  Score=35.28  Aligned_cols=40  Identities=18%  Similarity=0.266  Sum_probs=28.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444445678888888888875 67888877 6777777774

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.65  E-value=0.0052  Score=35.18  Aligned_cols=36  Identities=19%  Similarity=0.288  Sum_probs=25.4

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      ..+++.|+.|++.|.. ..|..|+. +-++++..|..|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3567778888887765 66777776 667777777655

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.64  E-value=0.0059  Score=35.01  Aligned_cols=40  Identities=18%  Similarity=0.313  Sum_probs=28.9

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4444445678888888888875 67888876 6777777774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.63  E-value=0.0081  Score=34.39  Aligned_cols=40  Identities=15%  Similarity=0.323  Sum_probs=29.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3334445678889999998875 67888987 7777887775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=95.63  E-value=0.0023  Score=39.83  Aligned_cols=49  Identities=10%  Similarity=0.219  Sum_probs=32.1

Q ss_pred             HhhhhhcCCCccccccccCCCCcccch-hhhHHhhhcCcceeccCcccccch
Q 031516           30 LAIHKGENCPQRIVTCDFCEFPLPAVD-LAEHQEVCGNRTELCHLCNRYIRL   80 (158)
Q Consensus        30 L~~H~~~~C~~R~v~C~~C~~~~~~~~-L~~H~~~C~~r~v~C~~C~~~i~~   80 (158)
                      |+.|+..+-..+++.|+.|++.|.... |.  ..+-++++..|+.|++.+..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~--~~H~~~k~~~C~~C~k~f~~   51 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ--LFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH--HEETTTTEEBCSSSCCBCEE
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH--hhcCCCCCEECCCCCCcccc
Confidence            345555555677888888888876532 22  22566778888888877643

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.62  E-value=0.0043  Score=35.62  Aligned_cols=40  Identities=18%  Similarity=0.233  Sum_probs=27.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4434445677888888888765 66788876 6677777774

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=95.61  E-value=0.012  Score=37.37  Aligned_cols=48  Identities=21%  Similarity=0.328  Sum_probs=38.9

Q ss_pred             cccc--ccCCCCccc-chhhhHHh-hhcCcceeccC--cccccchh-HHHHHHHH
Q 031516           42 IVTC--DFCEFPLPA-VDLAEHQE-VCGNRTELCHL--CNRYIRLR-ERYNHESR   89 (158)
Q Consensus        42 ~v~C--~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~--C~~~i~~~-~l~~H~~~   89 (158)
                      ++.|  +.|++.|.. ..|..|+. +-+..+..|+.  |++.+... +|..|+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   55 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV   55 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH
Confidence            3568  789999874 78999988 78889999987  99887655 67789864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.59  E-value=0.0078  Score=33.52  Aligned_cols=33  Identities=15%  Similarity=0.237  Sum_probs=23.3

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      ..+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4567788888888765 66777876 566666665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.0068  Score=34.66  Aligned_cols=40  Identities=18%  Similarity=0.222  Sum_probs=28.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4434445677888888888875 67888877 6777777774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.005  Score=35.34  Aligned_cols=40  Identities=18%  Similarity=0.227  Sum_probs=28.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4444445678888888888775 67888877 6777777775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.0053  Score=35.14  Aligned_cols=40  Identities=18%  Similarity=0.214  Sum_probs=27.4

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4434445677888888888775 67788876 6667777664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.0083  Score=34.35  Aligned_cols=40  Identities=15%  Similarity=0.186  Sum_probs=30.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444455788899999999876 67888987 7777787775

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.56  E-value=0.0067  Score=42.26  Aligned_cols=61  Identities=16%  Similarity=0.283  Sum_probs=49.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhc-C---CCccccccccCCCCccc-chhhhH-Hh-hhcCcceeccCc
Q 031516           14 EQVACSQCSETMER-EILAIHKGE-N---CPQRIVTCDFCEFPLPA-VDLAEH-QE-VCGNRTELCHLC   74 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~-~---C~~R~v~C~~C~~~~~~-~~L~~H-~~-~C~~r~v~C~~C   74 (158)
                      .+..|+.|+..+.. ..|..|+.. .   -..+++.|..|++.|.. ..|..| +. +-++++..|..+
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            35689999999886 789999852 4   45789999999999875 779999 66 888999999743

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.55  E-value=0.0051  Score=35.11  Aligned_cols=40  Identities=20%  Similarity=0.270  Sum_probs=28.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4444445677888888888775 67888876 6777777774

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.55  E-value=0.0065  Score=34.65  Aligned_cols=40  Identities=18%  Similarity=0.269  Sum_probs=29.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4444445678889999988875 67888887 7777777774

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.55  E-value=0.0049  Score=35.30  Aligned_cols=40  Identities=10%  Similarity=0.109  Sum_probs=29.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444455678889999998875 67888887 7777777775

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.54  E-value=0.0065  Score=36.37  Aligned_cols=41  Identities=17%  Similarity=0.306  Sum_probs=34.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhh-cCCCccccccccCCCCccc
Q 031516           14 EQVACSQCSETMER-EILAIHKG-ENCPQRIVTCDFCEFPLPA   54 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~-~~C~~R~v~C~~C~~~~~~   54 (158)
                      .+..|+.|+..+.. ..|..|+. .+-..+++.|..|++.|..
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            45689999999876 78999975 6778899999999998764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.51  E-value=0.0048  Score=35.26  Aligned_cols=40  Identities=15%  Similarity=0.282  Sum_probs=26.9

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4433445677788888888765 66777876 6666676664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.51  E-value=0.0049  Score=35.21  Aligned_cols=40  Identities=13%  Similarity=0.220  Sum_probs=27.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4444445677888888888765 66788876 6667777764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.48  E-value=0.0071  Score=34.73  Aligned_cols=37  Identities=16%  Similarity=0.328  Sum_probs=26.9

Q ss_pred             cCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           36 ENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        36 ~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      ..-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            3445677888888888875 66888876 6777777774

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.48  E-value=0.0063  Score=33.94  Aligned_cols=39  Identities=18%  Similarity=0.268  Sum_probs=25.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3333445677888888888775 66778876 566666554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.46  E-value=0.0056  Score=34.94  Aligned_cols=40  Identities=15%  Similarity=0.262  Sum_probs=26.7

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3333445677788888888764 66777876 6666776664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.44  E-value=0.011  Score=33.42  Aligned_cols=36  Identities=19%  Similarity=0.240  Sum_probs=27.1

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      .-..+++.|+.|++.|.. ..|..|+. +-++++..|+
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345678889999988875 67888887 7777777763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.38  E-value=0.0051  Score=35.28  Aligned_cols=40  Identities=10%  Similarity=0.164  Sum_probs=27.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444445677888888888765 66778876 6677777764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.36  E-value=0.0084  Score=34.33  Aligned_cols=36  Identities=19%  Similarity=0.396  Sum_probs=26.7

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      .-..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            345677888888888875 66888877 6777777774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.33  E-value=0.0075  Score=33.77  Aligned_cols=34  Identities=15%  Similarity=0.272  Sum_probs=22.5

Q ss_pred             CCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           38 CPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        38 C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      -..+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34567778888887765 66777766 555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=95.30  E-value=0.0056  Score=38.41  Aligned_cols=49  Identities=22%  Similarity=0.523  Sum_probs=39.8

Q ss_pred             ceecCcc--CChhhhh-hHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh
Q 031516           14 EQVACSQ--CSETMER-EILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~--C~~~i~r-~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~   62 (158)
                      ....|..  |+..+.. ..|..|+...-..+++.|.+  |++.|.. ..|..|+.
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            3457875  9999886 78999988888889999976  9999875 67888863

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=95.29  E-value=0.0092  Score=39.35  Aligned_cols=49  Identities=20%  Similarity=0.417  Sum_probs=41.4

Q ss_pred             ceecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+  .|+..+.. ..|..|+...-..+++.|..|++.|.. ..|..|+.
T Consensus        44 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   96 (100)
T 2ebt_A           44 KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK   96 (100)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHH
T ss_pred             CCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHH
Confidence            457896  69999876 789999887888899999999999875 77888975

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.22  E-value=0.023  Score=35.83  Aligned_cols=50  Identities=18%  Similarity=0.371  Sum_probs=40.5

Q ss_pred             cccccccc--CCCCccc-chhhhHHh--hhcCcceeccC--cccccchh-HHHHHHHH
Q 031516           40 QRIVTCDF--CEFPLPA-VDLAEHQE--VCGNRTELCHL--CNRYIRLR-ERYNHESR   89 (158)
Q Consensus        40 ~R~v~C~~--C~~~~~~-~~L~~H~~--~C~~r~v~C~~--C~~~i~~~-~l~~H~~~   89 (158)
                      .+++.|..  |++.|.. ..|..|+.  +-..++..|+.  |++.+... .|..|+..
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHH
Confidence            46778887  9999875 78999986  67788999987  99987765 57799874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=95.22  E-value=0.009  Score=33.26  Aligned_cols=33  Identities=18%  Similarity=0.200  Sum_probs=20.5

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      ..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4566777777777654 56677765 555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.20  E-value=0.0071  Score=34.24  Aligned_cols=39  Identities=13%  Similarity=0.243  Sum_probs=25.8

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3333445667788888888765 66777876 666666665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.13  E-value=0.0083  Score=33.94  Aligned_cols=39  Identities=10%  Similarity=0.185  Sum_probs=24.5

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            3333445567777778777764 56777766 555666555

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.11  E-value=0.0087  Score=33.42  Aligned_cols=35  Identities=14%  Similarity=0.225  Sum_probs=23.8

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      .-..+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344667788888888765 66777876 666666554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.10  E-value=0.0055  Score=34.97  Aligned_cols=40  Identities=15%  Similarity=0.272  Sum_probs=26.1

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-+.++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3333444567778888877765 66777776 6666666664

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.10  E-value=0.0098  Score=33.94  Aligned_cols=35  Identities=11%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45789999999987 899999988888899999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.10  E-value=0.01  Score=33.91  Aligned_cols=35  Identities=11%  Similarity=0.171  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999986 899999988888889999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.08  E-value=0.01  Score=33.79  Aligned_cols=35  Identities=14%  Similarity=0.268  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           11 KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999986 799999988888889999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.05  E-value=0.011  Score=33.78  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=30.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45789999999986 799999988888889999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.04  E-value=0.0079  Score=34.46  Aligned_cols=40  Identities=13%  Similarity=0.257  Sum_probs=26.3

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhc-Ccceecc
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCG-NRTELCH   72 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~-~r~v~C~   72 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-+ .++..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3333445677788888888765 66777876 566 6666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.03  E-value=0.0073  Score=34.09  Aligned_cols=39  Identities=15%  Similarity=0.185  Sum_probs=24.0

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|+.|++.|.. ..|..|+. +-+.++..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3333344567777777777664 56777766 555666555

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.02  E-value=0.0052  Score=35.10  Aligned_cols=36  Identities=11%  Similarity=0.173  Sum_probs=30.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCE   49 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~   49 (158)
                      ++..|+.|+..+.+ ..|..|+...-..+++.|+.|+
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            35679999999876 7899998888888999999986

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.99  E-value=0.01  Score=33.92  Aligned_cols=35  Identities=14%  Similarity=0.265  Sum_probs=29.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45689999999986 799999887778889999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=94.96  E-value=0.012  Score=33.52  Aligned_cols=35  Identities=11%  Similarity=0.233  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             cCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999886 899999888888889999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=94.96  E-value=0.012  Score=33.61  Aligned_cols=35  Identities=11%  Similarity=0.254  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45689999999986 799999887778889999877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.96  E-value=0.011  Score=33.71  Aligned_cols=35  Identities=11%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999987 899999888888889999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.95  E-value=0.0096  Score=33.98  Aligned_cols=35  Identities=14%  Similarity=0.217  Sum_probs=30.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45689999999886 799999988888899999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.95  E-value=0.013  Score=33.47  Aligned_cols=35  Identities=17%  Similarity=0.341  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. .+|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45689999999987 799999988888899999877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.93  E-value=0.012  Score=33.53  Aligned_cols=35  Identities=11%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45689999999986 799999987778889999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.93  E-value=0.012  Score=33.51  Aligned_cols=35  Identities=11%  Similarity=0.162  Sum_probs=30.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45789999999986 799999988888889999887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.92  E-value=0.013  Score=33.45  Aligned_cols=35  Identities=11%  Similarity=0.245  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999987 899999988888889999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=94.92  E-value=0.014  Score=33.20  Aligned_cols=35  Identities=20%  Similarity=0.308  Sum_probs=30.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999987 899999988888899999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.92  E-value=0.01  Score=33.80  Aligned_cols=35  Identities=14%  Similarity=0.260  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45689999999987 799999888888899999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.91  E-value=0.012  Score=33.58  Aligned_cols=35  Identities=11%  Similarity=0.116  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999886 799999888778889999887

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=94.90  E-value=0.0073  Score=38.97  Aligned_cols=49  Identities=22%  Similarity=0.426  Sum_probs=40.7

Q ss_pred             ceecCc--cCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+..|+  .|+..+.. ..|..|+...-..+++.|+.|+..|.. ..|..|+.
T Consensus        34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A           34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGG
T ss_pred             CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            456897  69999875 788999877777889999999999875 77888875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.90  E-value=0.012  Score=33.52  Aligned_cols=35  Identities=11%  Similarity=0.170  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999987 799999987778889999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.88  E-value=0.013  Score=33.55  Aligned_cols=35  Identities=17%  Similarity=0.319  Sum_probs=29.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999986 899999987778889999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.82  E-value=0.014  Score=33.32  Aligned_cols=35  Identities=11%  Similarity=0.140  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhh-cCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKG-ENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~-~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+. ..-..+++.|..|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            45689999999986 89999987 7777889999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.80  E-value=0.013  Score=33.27  Aligned_cols=35  Identities=11%  Similarity=0.217  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999986 799999887778889999877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=94.80  E-value=0.013  Score=33.41  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=29.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999886 799999887778889999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.80  E-value=0.01  Score=33.75  Aligned_cols=35  Identities=14%  Similarity=0.267  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34579999999986 799999988888889999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.75  E-value=0.016  Score=33.05  Aligned_cols=35  Identities=14%  Similarity=0.377  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.+ ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46789999999986 799999988888889999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.74  E-value=0.015  Score=33.15  Aligned_cols=35  Identities=17%  Similarity=0.250  Sum_probs=30.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46789999999986 799999987778889999876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.73  E-value=0.0069  Score=34.28  Aligned_cols=39  Identities=13%  Similarity=0.232  Sum_probs=26.6

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      |+...-..+++.|..|++.|.. ..|..|+. +-++++..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4444445677888888888765 66778876 666666665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.68  E-value=0.014  Score=33.26  Aligned_cols=35  Identities=9%  Similarity=0.157  Sum_probs=30.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999886 899999888888889999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.64  E-value=0.01  Score=33.74  Aligned_cols=35  Identities=14%  Similarity=0.224  Sum_probs=29.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999987 799999987778889999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.63  E-value=0.011  Score=33.71  Aligned_cols=35  Identities=20%  Similarity=0.297  Sum_probs=29.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45689999999986 789999877777889999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.62  E-value=0.011  Score=33.67  Aligned_cols=35  Identities=11%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999986 799999887777889999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.60  E-value=0.013  Score=33.36  Aligned_cols=35  Identities=11%  Similarity=0.247  Sum_probs=29.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999987 799999987778889999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.59  E-value=0.014  Score=33.29  Aligned_cols=35  Identities=11%  Similarity=0.155  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999986 799999887778889999877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.54  E-value=0.012  Score=33.18  Aligned_cols=35  Identities=14%  Similarity=0.319  Sum_probs=29.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999986 789999877777888999877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=94.49  E-value=0.012  Score=33.66  Aligned_cols=35  Identities=11%  Similarity=0.242  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999987 789999887777889999877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=94.48  E-value=0.012  Score=33.66  Aligned_cols=35  Identities=14%  Similarity=0.304  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      ++..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999986 799999887778889999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.48  E-value=0.013  Score=33.45  Aligned_cols=35  Identities=14%  Similarity=0.272  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             cCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            46789999999986 789999877777889999877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.45  E-value=0.012  Score=33.49  Aligned_cols=35  Identities=20%  Similarity=0.278  Sum_probs=29.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999886 789999887778889999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.42  E-value=0.013  Score=33.43  Aligned_cols=35  Identities=17%  Similarity=0.157  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999986 789999877777889999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.37  E-value=0.01  Score=33.97  Aligned_cols=35  Identities=14%  Similarity=0.260  Sum_probs=29.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45789999999986 789999877777888999877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.31  E-value=0.012  Score=33.58  Aligned_cols=35  Identities=17%  Similarity=0.379  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45689999999986 789999887777889999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.30  E-value=0.01  Score=33.90  Aligned_cols=35  Identities=14%  Similarity=0.251  Sum_probs=29.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45789999999987 789999877777888999887

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.29  E-value=0.021  Score=32.30  Aligned_cols=35  Identities=14%  Similarity=0.158  Sum_probs=20.4

Q ss_pred             cCCCccccccccCCCCccc-chhhhHHh-hhcCccee
Q 031516           36 ENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTEL   70 (158)
Q Consensus        36 ~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~   70 (158)
                      ..-..+++.|..|++.|.. ..|..|+. +-++++..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            3344566677777777654 55666665 44544443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.27  E-value=0.011  Score=33.88  Aligned_cols=35  Identities=14%  Similarity=0.277  Sum_probs=29.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45689999999886 789999877777888999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=94.27  E-value=0.019  Score=32.64  Aligned_cols=35  Identities=14%  Similarity=0.302  Sum_probs=29.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            46789999999986 799999887777888998866

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.19  E-value=0.02  Score=32.71  Aligned_cols=36  Identities=14%  Similarity=0.273  Sum_probs=23.5

Q ss_pred             Cccccccc--cCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           39 PQRIVTCD--FCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        39 ~~R~v~C~--~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      ..+++.|.  .|++.|.. ..|..|+. +-++++..|..|
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35667776  67777654 56777766 566667777654

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.19  E-value=0.0095  Score=34.17  Aligned_cols=35  Identities=14%  Similarity=0.185  Sum_probs=29.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35679999999987 789999877777888999877

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.16  E-value=0.037  Score=31.11  Aligned_cols=34  Identities=12%  Similarity=0.296  Sum_probs=25.5

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      ..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3567888888888875 67888877 6777777774

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.13  E-value=0.011  Score=33.65  Aligned_cols=35  Identities=11%  Similarity=0.212  Sum_probs=29.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45789999999886 789999877777888999877

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.04  E-value=0.07  Score=34.72  Aligned_cols=47  Identities=17%  Similarity=0.253  Sum_probs=37.2

Q ss_pred             cccccCCCCccc-chhhhHHh--hhcCcc--------eeccCcccccchh-HHHHHHHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQE--VCGNRT--------ELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~~--~C~~r~--------v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ..|..|++.|.. ..|..|+.  +-+..+        ..|..|++.+... .|..|+..
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~   84 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV   84 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHh
Confidence            569999999875 77999986  556555        7899999987765 57799864

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.99  E-value=0.027  Score=31.97  Aligned_cols=35  Identities=14%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999986 899999987878888998866

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.96  E-value=0.038  Score=31.50  Aligned_cols=34  Identities=15%  Similarity=0.208  Sum_probs=25.9

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      ..+++.|..|++.|.. ..|..|+. +-++++..|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3567888889888875 67888877 6777777774

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.88  E-value=0.026  Score=32.07  Aligned_cols=35  Identities=14%  Similarity=0.209  Sum_probs=29.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45789999999986 799999888888888998865

>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A

Probab=93.58  E-value=0.026  Score=43.62  Aligned_cols=42  Identities=31%  Similarity=0.553  Sum_probs=14.9

Q ss_pred             CCCCcccchhhhHHhhhcCcceeccC----cccccchhHHHHHHHH
Q 031516           48 CEFPLPAVDLAEHQEVCGNRTELCHL----CNRYIRLRERYNHESR   89 (158)
Q Consensus        48 C~~~~~~~~L~~H~~~C~~r~v~C~~----C~~~i~~~~l~~H~~~   89 (158)
                      |...++..++..|++.|+.+|..||.    |+..-...+|..|...
T Consensus        16 C~~~~~y~~~~~He~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~   61 (193)
T 2a25_A           16 CEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH   61 (193)
T ss_dssp             --------------------CEECCCC--CCCCEECSTTHHHHHHH
T ss_pred             CCcccccccccchhhcCCCCCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence            66666777777777777777777762    7766666677777654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.55  E-value=0.036  Score=31.45  Aligned_cols=35  Identities=11%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45789999999986 799999987777888888754

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.53  E-value=0.017  Score=32.89  Aligned_cols=35  Identities=11%  Similarity=0.176  Sum_probs=28.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45789999999986 789999876667788888876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.53  E-value=0.024  Score=32.20  Aligned_cols=35  Identities=11%  Similarity=0.190  Sum_probs=29.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45689999999986 799999877777888888876

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.46  E-value=0.027  Score=31.15  Aligned_cols=32  Identities=22%  Similarity=0.353  Sum_probs=18.1

Q ss_pred             ccccccccCCCCccc-chhhhHHh-hhcCcceec
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELC   71 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C   71 (158)
                      .+++.|+.|++.|.. ..|..|+. +-++++..|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455666666666654 45666655 444444443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.44  E-value=0.023  Score=32.18  Aligned_cols=34  Identities=24%  Similarity=0.412  Sum_probs=21.6

Q ss_pred             CccccccccCCCCccc-chhhhHHh-hhcCcceecc
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      ..+++.|..|++.|.. ..|..|+. +-++++..|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3456677777777664 55677765 5566666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.24  E-value=0.012  Score=33.66  Aligned_cols=35  Identities=14%  Similarity=0.174  Sum_probs=28.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34579999999886 789999876666788889877

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.93  E-value=0.026  Score=38.12  Aligned_cols=50  Identities=18%  Similarity=0.373  Sum_probs=35.6

Q ss_pred             CCCccccccccCCCCcccchhhhHHhhhcC-cceeccCcccccchhHHHHH
Q 031516           37 NCPQRIVTCDFCEFPLPAVDLAEHQEVCGN-RTELCHLCNRYIRLRERYNH   86 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~-r~v~C~~C~~~i~~~~l~~H   86 (158)
                      .|+.--..|..|+..+....++.|...|.. ..+.|-.|++.+...+...|
T Consensus         5 ~~~MV~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~H   55 (79)
T 1wjv_A            5 SSGMVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSH   55 (79)
T ss_dssp             SCCCCEEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTC
T ss_pred             CCceeEEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCE
Confidence            455666677778877777778888767765 36777778777776666666

>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A

Probab=92.43  E-value=0.04  Score=42.60  Aligned_cols=48  Identities=23%  Similarity=0.383  Sum_probs=17.8

Q ss_pred             ceecCc----cCChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhHHh
Q 031516           14 EQVACS----QCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~----~C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H~~   62 (158)
                      ..+.|+    ||.+.+.-.++..|+ ..|++++..|++    |+-.=...+|..|..
T Consensus         5 ~~~pC~~~~~GC~~~~~y~~~~~He-~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~   60 (193)
T 2a25_A            5 VLFPCKYASSGCEITLPHTEKADHE-ELCEFRPYSCPCPGASCKWQGSLDAVMPHLM   60 (193)
T ss_dssp             --------------------------------CEECCCC--CCCCEECSTTHHHHHH
T ss_pred             eEecCCCCCCCCCcccccccccchh-hcCCCCCccCCCCCCCCcCCCCHHHHHHHHH
Confidence            356787    799999999999998 589999999987    887767789999976

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.40  E-value=0.068  Score=30.33  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=29.3

Q ss_pred             ceecCc--cCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACS--QCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|.  .|+..+.. ..|..|+...-..+++.|..|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456797  89999886 799999987778889999877

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=92.10  E-value=0.2  Score=31.48  Aligned_cols=48  Identities=27%  Similarity=0.508  Sum_probs=35.8

Q ss_pred             cccccCCCCcc-cchhhhHHhhhcCcceeccCcccccc--hhHHHHHHHHCCC
Q 031516           43 VTCDFCEFPLP-AVDLAEHQEVCGNRTELCHLCNRYIR--LRERYNHESRCTG   92 (158)
Q Consensus        43 v~C~~C~~~~~-~~~L~~H~~~C~~r~v~C~~C~~~i~--~~~l~~H~~~Cp~   92 (158)
                      ..|++|+..-. .++|+.|...||+  -+||+|-...-  ...|+.|-++|+.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~--gqCPYC~~~~e~tesAlQaHfkvCkl   54 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN--GQCPYCMTITEATESALQAHYSICKL   54 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT--TBCTTTCCBCCSSHHHHHHHHTTCCG
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC--CCCCcccCcCCcCHHHHHHHHHHhcc
Confidence            45777777654 5889999999987  48999865544  3458899998864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.93  E-value=0.053  Score=30.76  Aligned_cols=35  Identities=14%  Similarity=0.216  Sum_probs=28.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccC
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   48 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C   48 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45689999999986 789999877777788888754

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=91.92  E-value=0.12  Score=27.31  Aligned_cols=26  Identities=15%  Similarity=0.075  Sum_probs=14.3

Q ss_pred             ccccccCCCCccc-chhhhHHh-hhcCc
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQE-VCGNR   67 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~~-~C~~r   67 (158)
                      ++.|+.|++.|.. ..|..|+. +-+++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            4556666666553 45666655 44443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=91.70  E-value=0.048  Score=32.29  Aligned_cols=33  Identities=15%  Similarity=0.283  Sum_probs=17.8

Q ss_pred             hhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           56 DLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        56 ~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      .|..|+. +-++++..|..|++.+... .|..|+.
T Consensus        11 ~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   45 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            3445554 4555666666666655443 3556654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=91.40  E-value=0.065  Score=30.33  Aligned_cols=21  Identities=24%  Similarity=0.436  Sum_probs=11.6

Q ss_pred             cccccccCCCCccc-chhhhHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +++.|..|++.|.. ..|..|+
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH
T ss_pred             cCeECCCCCCccCCHhHccCcC
Confidence            45556566655553 4555555

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.23  E-value=0.1  Score=29.52  Aligned_cols=33  Identities=12%  Similarity=0.286  Sum_probs=27.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A           11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999987 7999998877777888875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=91.11  E-value=0.097  Score=28.83  Aligned_cols=33  Identities=18%  Similarity=0.420  Sum_probs=26.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.+ ..|..|+...-..+++.|.
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45689999999987 7899998777777777763

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.00  E-value=0.1  Score=29.61  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=27.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      ++..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A           11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             cccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            45689999999987 7999998877778888876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.00  E-value=0.017  Score=35.70  Aligned_cols=54  Identities=19%  Similarity=0.299  Sum_probs=43.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLC   74 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C   74 (158)
                      .+..|+.|+..+.. ..|..       .+++.|..|+..|.. ..|..|+. +-++++..|+.|
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            46789999999875 44443       678999999999875 77899987 778888888766

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.98  E-value=0.1  Score=29.37  Aligned_cols=33  Identities=15%  Similarity=0.387  Sum_probs=27.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A           11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             cCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            45689999999986 7999998877777888875

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.93  E-value=0.11  Score=29.30  Aligned_cols=33  Identities=18%  Similarity=0.417  Sum_probs=27.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45789999999986 7999999877777888875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.91  E-value=0.12  Score=28.39  Aligned_cols=32  Identities=13%  Similarity=0.333  Sum_probs=25.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            9 RVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45689999999986 789999877766676665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.79  E-value=0.11  Score=29.14  Aligned_cols=33  Identities=15%  Similarity=0.391  Sum_probs=27.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A           11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45789999999986 8999999877778888875

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.71  E-value=0.11  Score=29.24  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=27.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999986 8999998877777888875

>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1

Probab=90.70  E-value=0.31  Score=33.71  Aligned_cols=70  Identities=19%  Similarity=0.260  Sum_probs=47.5

Q ss_pred             cCChhhhhhHHhhhhhcCCCccccccccCCCCcccchhh---hHH-hhhcCcceecc--CcccccchhHHHHHHHHCCCC
Q 031516           20 QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLA---EHQ-EVCGNRTELCH--LCNRYIRLRERYNHESRCTGV   93 (158)
Q Consensus        20 ~C~~~i~r~~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~---~H~-~~C~~r~v~C~--~C~~~i~~~~l~~H~~~Cp~~   93 (158)
                      .||..|=+.=+...+...    ...|+.|...+...++.   ... ..-....+.|+  +|+..+.+.++.+|++.|...
T Consensus        40 ~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~gC~~~~~~~~~~~H~~~C~~~  115 (116)
T 1rmd_A           40 SCKHLFCRICILRCLKVM----GSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPAQDCNEEVSLEKYNHHVSSHKES  115 (116)
T ss_dssp             TTSCEEEHHHHHHHHHHT----CSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEEECCSTTCCCEEEHHHHHHHHHTSCCC
T ss_pred             CCCCcccHHHHHHHHhHC----cCcCCCCCCCCCHhhccccHHHHHHHHHHhcCCCCCCCCcchhhHhHHHHHHHHhhcc
Confidence            466666555555554321    34688999998765543   122 24455678887  799999999999999999753

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.62  E-value=0.13  Score=28.87  Aligned_cols=33  Identities=12%  Similarity=0.291  Sum_probs=27.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A           11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             cCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            45689999999986 7999998877777888875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.56  E-value=0.12  Score=28.53  Aligned_cols=32  Identities=13%  Similarity=0.226  Sum_probs=25.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45689999999987 799999877766676665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.53  E-value=0.13  Score=28.88  Aligned_cols=33  Identities=12%  Similarity=0.301  Sum_probs=27.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45789999999986 7999998777777888875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=90.52  E-value=0.14  Score=31.39  Aligned_cols=39  Identities=21%  Similarity=0.346  Sum_probs=28.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCcccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPAV   55 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~~   55 (158)
                      .+..|+.|+..+.. ..|.   ..+-..+++.|..|++.|...
T Consensus        13 k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A           13 ASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             CCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            46789999999876 3343   234456899999999998753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.45  E-value=0.13  Score=29.01  Aligned_cols=33  Identities=15%  Similarity=0.360  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            45689999999986 8999998777777787775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.29  E-value=0.11  Score=29.25  Aligned_cols=33  Identities=15%  Similarity=0.342  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A           11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45689999999986 7899998877777888775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.27  E-value=0.11  Score=28.80  Aligned_cols=33  Identities=12%  Similarity=0.365  Sum_probs=26.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            45789999999886 7999998777777777764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.26  E-value=0.14  Score=28.89  Aligned_cols=33  Identities=12%  Similarity=0.265  Sum_probs=27.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A           11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45689999999986 7999998877777888875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.23  E-value=0.12  Score=29.10  Aligned_cols=33  Identities=15%  Similarity=0.334  Sum_probs=27.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A           11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999986 7999998877777888875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.14  E-value=0.13  Score=28.98  Aligned_cols=33  Identities=12%  Similarity=0.282  Sum_probs=27.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A           11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999986 7999998877777888775

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=90.14  E-value=0.12  Score=28.72  Aligned_cols=33  Identities=15%  Similarity=0.378  Sum_probs=26.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             cCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            45679999999886 7899998777777777764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=90.12  E-value=0.18  Score=26.73  Aligned_cols=24  Identities=21%  Similarity=0.362  Sum_probs=13.8

Q ss_pred             CccccccccCCCCccc-chhhhHHh
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ..+++.|+.|++.|.. ..|..|+.
T Consensus         8 ~~k~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A            8 GIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCCccCCCCCcccCcHHHHHHHHH
Confidence            3456666666666654 45555543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.12  E-value=0.13  Score=28.66  Aligned_cols=33  Identities=18%  Similarity=0.371  Sum_probs=26.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            45689999999986 7999998777777777774

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.89  E-value=0.12  Score=28.99  Aligned_cols=33  Identities=12%  Similarity=0.346  Sum_probs=27.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      ++..|+.|+..+.. ..|..|+...-..+++.|.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45689999999887 7899998777777887775

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.88  E-value=0.15  Score=27.95  Aligned_cols=32  Identities=16%  Similarity=0.313  Sum_probs=25.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45689999999986 799999877766676665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.87  E-value=0.14  Score=28.83  Aligned_cols=33  Identities=12%  Similarity=0.309  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45689999999986 7899998777777888775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.68  E-value=0.12  Score=29.09  Aligned_cols=33  Identities=18%  Similarity=0.410  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            44579999999987 7999998877777888875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.58  E-value=0.18  Score=28.42  Aligned_cols=33  Identities=15%  Similarity=0.312  Sum_probs=27.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCC-ccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCP-QRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~-~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-. .+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           11 KCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45689999999987 899999877777 7788775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.58  E-value=0.13  Score=28.96  Aligned_cols=33  Identities=21%  Similarity=0.332  Sum_probs=27.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A           11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999986 7999998877777888875

>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}

Probab=89.57  E-value=0.15  Score=27.31  Aligned_cols=25  Identities=28%  Similarity=0.689  Sum_probs=14.1

Q ss_pred             ccccccccCCCCcccchhhhHHhhh
Q 031516           40 QRIVTCDFCEFPLPAVDLAEHQEVC   64 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~~~L~~H~~~C   64 (158)
                      ...+.|+.|++.++...++.|+..|
T Consensus         4 ef~vqcpvcqq~mpaahin~hldrc   28 (29)
T 3vhs_A            4 EFQVQCPVCQQMMPAAHINSHLDRC   28 (29)
T ss_dssp             -CEEECTTTCCEEEGGGHHHHHHHH
T ss_pred             ceeeeChHHHHhCcHHHHHHHHhcc
Confidence            3445566666666666666665544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=89.54  E-value=0.14  Score=27.78  Aligned_cols=22  Identities=32%  Similarity=0.641  Sum_probs=9.8

Q ss_pred             cccccccCCCCccc-chhhhHHh
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +++.|..|++.|.. ..|..|+.
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~   27 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMN   27 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHH
T ss_pred             CceECCCCCcccCCHHHHHHHHH
Confidence            34445555544432 33444443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.51  E-value=0.12  Score=28.68  Aligned_cols=33  Identities=18%  Similarity=0.400  Sum_probs=26.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45689999999987 7899998777777777774

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.44  E-value=0.11  Score=29.27  Aligned_cols=33  Identities=18%  Similarity=0.338  Sum_probs=27.2

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A           11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999987 7899998777777888775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=89.37  E-value=0.11  Score=29.29  Aligned_cols=33  Identities=15%  Similarity=0.340  Sum_probs=27.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A           11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45789999999986 7899998777777787775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.36  E-value=0.12  Score=29.07  Aligned_cols=33  Identities=15%  Similarity=0.327  Sum_probs=27.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45679999999987 7999998877777888775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=89.33  E-value=0.16  Score=27.87  Aligned_cols=32  Identities=19%  Similarity=0.381  Sum_probs=25.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        10 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45789999999986 799999877666666665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.26  E-value=0.12  Score=29.21  Aligned_cols=33  Identities=12%  Similarity=0.319  Sum_probs=27.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A           11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45789999999986 7899998777777888875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.24  E-value=0.15  Score=27.96  Aligned_cols=32  Identities=19%  Similarity=0.367  Sum_probs=25.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45689999999986 789999877777777766

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.08  E-value=0.13  Score=29.02  Aligned_cols=33  Identities=24%  Similarity=0.427  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            46789999999986 7899998777777788775

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.06  E-value=0.12  Score=28.99  Aligned_cols=33  Identities=18%  Similarity=0.427  Sum_probs=27.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A           11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            45789999999886 7999998777777788775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.97  E-value=0.17  Score=28.14  Aligned_cols=33  Identities=15%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            45689999999987 7999998777777777763

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.95  E-value=0.087  Score=35.55  Aligned_cols=46  Identities=22%  Similarity=0.462  Sum_probs=40.3

Q ss_pred             eecCccCChhhhhhHHhhhhhcCCCc-cccccccCCCCcccchhhhHH
Q 031516           15 QVACSQCSETMEREILAIHKGENCPQ-RIVTCDFCEFPLPAVDLAEHQ   61 (158)
Q Consensus        15 ~V~C~~C~~~i~r~~L~~H~~~~C~~-R~v~C~~C~~~~~~~~L~~H~   61 (158)
                      ...|..|++.+.+..++.|. ..|.. ..+.|-.|+..|...+...|-
T Consensus        10 ~F~C~~Cgd~lKK~kv~~H~-~~Cr~~~~~SCIDC~~~F~~~~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVKKIQVEKHV-SNCRNCECLSCIDCGKDFWGDDYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEETTHHHHHH-HHCTTCCEEEETTTTEEEEGGGTTTCC
T ss_pred             EEEcCCCCCeeecccchhHH-hhCCCCCcEEecccCCeeCCCCEeCEe
Confidence            45799999999999999997 58976 579999999999998888884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.95  E-value=0.13  Score=29.07  Aligned_cols=33  Identities=15%  Similarity=0.383  Sum_probs=26.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A           11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45689999999986 7899998777777888775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=88.70  E-value=0.2  Score=26.05  Aligned_cols=21  Identities=19%  Similarity=0.382  Sum_probs=9.2

Q ss_pred             cccccccCCCCccc-chhhhHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +++.|..|++.|.. ..|..|+
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~   27 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHI   27 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH
T ss_pred             CCeECCCCcchhCCHHHHHHHH
Confidence            34444444444433 3344444

>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}

Probab=88.67  E-value=0.34  Score=31.97  Aligned_cols=36  Identities=33%  Similarity=0.640  Sum_probs=17.1

Q ss_pred             HHhhhhhcCCCccccccccCCCCcccchhhhHHhhhcCc
Q 031516           29 ILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNR   67 (158)
Q Consensus        29 ~L~~H~~~~C~~R~v~C~~C~~~~~~~~L~~H~~~C~~r   67 (158)
                      |-+-|.. .|.+.+  |+||...++..-|..|...||++
T Consensus        20 DqelHdl-nCs~Ni--CPYC~nRls~eGl~RHV~~CPKR   55 (77)
T 2l7x_A           20 DAEMHDL-NCSYNI--CPYCASRLTSDGLARHVTQCPKR   55 (77)
T ss_dssp             HHHHHHH-HHTTTC--CTTTCCCCCTTTHHHHHTTCSHH
T ss_pred             HHHHHHc-CCCccc--ChhhhccCCccchhhhcccCccH
Confidence            3334442 454443  55555555555555555444443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.65  E-value=0.13  Score=28.77  Aligned_cols=33  Identities=12%  Similarity=0.336  Sum_probs=26.1

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           11 TTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            45689999999986 7899998776677777764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=88.41  E-value=0.12  Score=29.11  Aligned_cols=28  Identities=21%  Similarity=0.548  Sum_probs=22.0

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQR   41 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R   41 (158)
                      ++..|+.|+..+.+ ..|..|+...|..|
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~py~C~~r   35 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQAYYCSHR   35 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHHHHTSTTC
T ss_pred             cCeECCCCCCccCCHhHccCcCCeECcCC
Confidence            46689999999997 89999985555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=88.34  E-value=0.26  Score=28.89  Aligned_cols=41  Identities=15%  Similarity=0.167  Sum_probs=30.5

Q ss_pred             hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh-hhcCcc
Q 031516           28 EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRT   68 (158)
Q Consensus        28 ~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~   68 (158)
                      ..|..|....-..+++.|..|++.|.. ..|..|+. +-++++
T Consensus        10 ~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A           10 PGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             SCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            345566655566789999999999875 77999987 555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.28  E-value=0.12  Score=29.17  Aligned_cols=33  Identities=12%  Similarity=0.242  Sum_probs=26.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999987 7899998777777787775

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.24  E-value=0.14  Score=28.95  Aligned_cols=33  Identities=12%  Similarity=0.209  Sum_probs=26.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45689999999986 7899998777777788775

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=88.19  E-value=0.069  Score=35.79  Aligned_cols=39  Identities=13%  Similarity=0.236  Sum_probs=29.0

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh-hhcCcceeccCcc
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCN   75 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~   75 (158)
                      .-..+++.|..|++.|.. ..|..|+. +-++++..|..|.
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            445678889999888875 67888877 6777777776554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=88.16  E-value=0.38  Score=23.64  Aligned_cols=21  Identities=29%  Similarity=0.713  Sum_probs=11.3

Q ss_pred             ccccccCCCCccc-chhhhHHh
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++.|..|++.|.. ..|..|+.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            3456666666543 45555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=88.10  E-value=0.26  Score=25.71  Aligned_cols=21  Identities=24%  Similarity=0.498  Sum_probs=9.8

Q ss_pred             cccccccCCCCccc-chhhhHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +++.|..|++.|.. ..|..|+
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~   27 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHL   27 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHH
T ss_pred             cCeeCCCCCcccCCHHHHHHHH
Confidence            34455555555432 3444444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.00  E-value=0.16  Score=28.30  Aligned_cols=33  Identities=12%  Similarity=0.239  Sum_probs=26.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            45689999999886 7899998776677777775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.80  E-value=0.12  Score=29.05  Aligned_cols=33  Identities=12%  Similarity=0.260  Sum_probs=26.3

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A           11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            45689999999886 7899998766667777775

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=87.56  E-value=0.36  Score=23.67  Aligned_cols=20  Identities=20%  Similarity=0.531  Sum_probs=9.5

Q ss_pred             cccccCCCCccc-chhhhHHh
Q 031516           43 VTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +.|..|++.|.. ..|..|+.
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHH
Confidence            445555555443 34444443

>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}

Probab=87.23  E-value=0.16  Score=33.55  Aligned_cols=50  Identities=24%  Similarity=0.519  Sum_probs=40.5

Q ss_pred             ccccccCCCC-cccchhhhHHhhhcCcceeccCcccccchhHHHHHHHHCCCC
Q 031516           42 IVTCDFCEFP-LPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGV   93 (158)
Q Consensus        42 ~v~C~~C~~~-~~~~~L~~H~~~C~~r~v~C~~C~~~i~~~~l~~H~~~Cp~~   93 (158)
                      ...|-.|.+. +...|-+-|...|...  .||+|...+...-|..|+-.||++
T Consensus         5 g~~C~kCEq~~vn~~DqelHdlnCs~N--iCPYC~nRls~eGl~RHV~~CPKR   55 (77)
T 2l7x_A            5 PQTCTICETTPVNAIDAEMHDLNCSYN--ICPYCASRLTSDGLARHVTQCPKR   55 (77)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHTTT--CCTTTCCCCCTTTHHHHHTTCSHH
T ss_pred             CceeeeeccccccHHHHHHHHcCCCcc--cChhhhccCCccchhhhcccCccH
Confidence            4456667654 6677888899899875  799999988888899999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=87.19  E-value=0.5  Score=22.94  Aligned_cols=21  Identities=19%  Similarity=0.404  Sum_probs=11.8

Q ss_pred             ccccccCCCCccc-chhhhHHh
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++.|..|++.|.. ..|..|+.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLK   23 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHH
Confidence            4556666666543 45555654

>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}

Probab=86.81  E-value=0.33  Score=25.96  Aligned_cols=26  Identities=19%  Similarity=0.456  Sum_probs=21.7

Q ss_pred             cCcceeccCcccccchhHHHHHHHHC
Q 031516           65 GNRTELCHLCNRYIRLRERYNHESRC   90 (158)
Q Consensus        65 ~~r~v~C~~C~~~i~~~~l~~H~~~C   90 (158)
                      |+..++|+-|.+-+....+..|++.|
T Consensus         3 pef~vqcpvcqq~mpaahin~hldrc   28 (29)
T 3vhs_A            3 PEFQVQCPVCQQMMPAAHINSHLDRC   28 (29)
T ss_dssp             --CEEECTTTCCEEEGGGHHHHHHHH
T ss_pred             CceeeeChHHHHhCcHHHHHHHHhcc
Confidence            67789999999999988999999876

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=86.79  E-value=0.31  Score=23.98  Aligned_cols=19  Identities=21%  Similarity=0.296  Sum_probs=7.9

Q ss_pred             cccccCCCCccc-chhhhHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +.|..|+..|.. ..|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHI   22 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHH
T ss_pred             ccCCCCCchhCCHHHHHHHH
Confidence            344444444432 3344443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=86.77  E-value=0.37  Score=31.99  Aligned_cols=34  Identities=18%  Similarity=0.242  Sum_probs=21.3

Q ss_pred             Ccccccccc--CCCCccc-chhhhHH-h-hhcCcceecc
Q 031516           39 PQRIVTCDF--CEFPLPA-VDLAEHQ-E-VCGNRTELCH   72 (158)
Q Consensus        39 ~~R~v~C~~--C~~~~~~-~~L~~H~-~-~C~~r~v~C~   72 (158)
                      ..+++.|.+  |++.|.. .+|..|+ . +-+++|..|.
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            456677754  7777664 5666775 3 6666666664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.71  E-value=0.25  Score=26.16  Aligned_cols=22  Identities=23%  Similarity=0.466  Sum_probs=10.9

Q ss_pred             cccccccCCCCccc-chhhhHHh
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +++.|..|++.|.. ..|..|+.
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~   30 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIK   30 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHH
T ss_pred             CCcCCCCCCCccCCHHHHHHHHH
Confidence            44555555555543 34555543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.53  E-value=0.18  Score=28.07  Aligned_cols=32  Identities=16%  Similarity=0.316  Sum_probs=25.7

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45689999999987 799999876666677766

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=86.51  E-value=0.28  Score=24.01  Aligned_cols=11  Identities=18%  Similarity=0.610  Sum_probs=4.7

Q ss_pred             cccccCCCCcc
Q 031516           43 VTCDFCEFPLP   53 (158)
Q Consensus        43 v~C~~C~~~~~   53 (158)
                      +.|..|++.|.
T Consensus         4 ~~C~~C~k~f~   14 (27)
T 2kvh_A            4 FSCSLCPQRSR   14 (27)
T ss_dssp             EECSSSSCEES
T ss_pred             ccCCCcChhhC
Confidence            34444444443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.78  E-value=0.47  Score=25.05  Aligned_cols=23  Identities=30%  Similarity=0.642  Sum_probs=13.7

Q ss_pred             ccccccccCCCCcccc--hhhhHHh
Q 031516           40 QRIVTCDFCEFPLPAV--DLAEHQE   62 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~~--~L~~H~~   62 (158)
                      .+++.|..|++.|...  .|..|+.
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~   31 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIW   31 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHH
T ss_pred             CCCeECCCCChhhccCHHHHHHHHH
Confidence            3556666666666553  5666654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.73  E-value=0.17  Score=27.82  Aligned_cols=32  Identities=13%  Similarity=0.168  Sum_probs=23.9

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A           10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45689999999886 789999865555555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=85.53  E-value=0.35  Score=23.77  Aligned_cols=10  Identities=30%  Similarity=1.002  Sum_probs=4.1

Q ss_pred             cccccCCCCc
Q 031516           43 VTCDFCEFPL   52 (158)
Q Consensus        43 v~C~~C~~~~   52 (158)
                      +.|..|+..|
T Consensus         4 ~~C~~C~~~f   13 (30)
T 2m0d_A            4 YQCDYCGRSF   13 (30)
T ss_dssp             EECTTTCCEE
T ss_pred             ccCCCCCccc
Confidence            3344444443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.33  E-value=0.13  Score=28.95  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=25.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45689999999987 7889998665556677765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.28  E-value=1  Score=27.48  Aligned_cols=32  Identities=25%  Similarity=0.511  Sum_probs=20.9

Q ss_pred             ceeccCcccccchh-HHHHHHH-HCCCCCCCCCC
Q 031516           68 TELCHLCNRYIRLR-ERYNHES-RCTGVPENTVG   99 (158)
Q Consensus        68 ~v~C~~C~~~i~~~-~l~~H~~-~Cp~~~~~~~~   99 (158)
                      ...|+.|+..+... .|..|++ .||........
T Consensus        12 ~~~CPrCn~~f~~~~sLr~HmkycCp~~v~~~~~   45 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYCCPEMVEYQSG   45 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHCTTTCCCCCS
T ss_pred             ceeCCcccccccchHHHHhhhhhcCcchhhhhcc
Confidence            45788888776644 5778876 47776655443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.18  E-value=0.15  Score=28.68  Aligned_cols=33  Identities=12%  Similarity=0.127  Sum_probs=25.5

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~   46 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45789999999986 7889998665556677764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=85.02  E-value=0.44  Score=23.23  Aligned_cols=19  Identities=21%  Similarity=0.464  Sum_probs=8.4

Q ss_pred             cccccCCCCccc-chhhhHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +.|..|++.|.. ..|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHL   22 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHH
Confidence            344445544432 3444444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.80  E-value=0.45  Score=24.99  Aligned_cols=22  Identities=27%  Similarity=0.638  Sum_probs=10.7

Q ss_pred             cccccccCCCCccc-chhhhHHh
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +++.|..|++.|.. ..|..|+.
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLR   30 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCEECCCCCceeCCHHHHHHHHH
Confidence            44555555555543 34444543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.71  E-value=0.65  Score=24.14  Aligned_cols=23  Identities=22%  Similarity=0.437  Sum_probs=13.0

Q ss_pred             ccccccccCCCCccc-chhhhHHh
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+++.|..|++.|.. ..|..|+.
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCeecCcCCCCcCchHHHHHHHH
Confidence            345566666666653 45556654

>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}

Probab=84.52  E-value=0.38  Score=28.66  Aligned_cols=23  Identities=17%  Similarity=0.614  Sum_probs=11.4

Q ss_pred             cCccCChhhhhhHHhhhhhcCCC
Q 031516           17 ACSQCSETMEREILAIHKGENCP   39 (158)
Q Consensus        17 ~C~~C~~~i~r~~L~~H~~~~C~   39 (158)
                      .|.+||+.+....+-+|++++|.
T Consensus        19 vC~~CgkPi~lsAIvdHLenhC~   41 (44)
T 2lo3_A           19 VCEKCGKPLALTAIVDHLENHCA   41 (44)
T ss_dssp             ECTTTCCEEETTTHHHHHHHCCT
T ss_pred             hhcccCCcchHHHHHHHHHHHhc
Confidence            34455555555555555544443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.30  E-value=0.46  Score=26.38  Aligned_cols=32  Identities=13%  Similarity=0.357  Sum_probs=24.6

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCcccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTC   45 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C   45 (158)
                      .+..|+.|+..+.. ..|..|+...-..+++.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            45689999999986 799999876666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.98  E-value=0.57  Score=24.38  Aligned_cols=22  Identities=18%  Similarity=0.466  Sum_probs=11.0

Q ss_pred             cccccccCCCCccc-chhhhHHh
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      +++.|..|++.|.. ..|..|+.
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLR   30 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH
Confidence            44555555555543 34555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=84.40  E-value=0.21  Score=24.87  Aligned_cols=19  Identities=21%  Similarity=0.475  Sum_probs=8.5

Q ss_pred             cccccCCCCccc-chhhhHH
Q 031516           43 VTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +.|..|++.|.. ..|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHV   22 (29)
Confidence            344555554432 3444443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.91  E-value=0.45  Score=24.96  Aligned_cols=21  Identities=24%  Similarity=0.543  Sum_probs=9.6

Q ss_pred             cccccccCCCCccc-chhhhHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +++.|..|++.|.. ..|..|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~   29 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHM   29 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH
T ss_pred             CCeECCCCCCccCCHHHHHHHH
Confidence            34445555554443 3344444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=84.09  E-value=0.22  Score=24.22  Aligned_cols=20  Identities=25%  Similarity=0.419  Sum_probs=9.7

Q ss_pred             ccccccCCCCccc-chhhhHH
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      ++.|+.|++.|.. ..|..|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            3445555555543 4444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=83.52  E-value=0.42  Score=23.39  Aligned_cols=11  Identities=18%  Similarity=0.649  Sum_probs=4.7

Q ss_pred             cccccCCCCcc
Q 031516           43 VTCDFCEFPLP   53 (158)
Q Consensus        43 v~C~~C~~~~~   53 (158)
                      +.|..|++.|.
T Consensus         4 ~~C~~C~k~f~   14 (28)
T 2kvf_A            4 YSCSVCGKRFS   14 (28)
T ss_dssp             EECSSSCCEES
T ss_pred             ccCCCCCcccC
Confidence            34444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=83.51  E-value=0.87  Score=22.99  Aligned_cols=21  Identities=29%  Similarity=0.550  Sum_probs=10.4

Q ss_pred             ccccc--cCCCCccc-chhhhHHh
Q 031516           42 IVTCD--FCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        42 ~v~C~--~C~~~~~~-~~L~~H~~   62 (158)
                      ++.|.  .|++.|.. ..|..|+.
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHH
Confidence            44555  45555543 44555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=80.76  E-value=0.57  Score=26.63  Aligned_cols=24  Identities=17%  Similarity=0.434  Sum_probs=11.5

Q ss_pred             Cccccccc--cCCCCccc-chhhhHHh
Q 031516           39 PQRIVTCD--FCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        39 ~~R~v~C~--~C~~~~~~-~~L~~H~~   62 (158)
                      ..+++.|.  .|++.|.. ..|..|+.
T Consensus        15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           15 PDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            34455553  35555543 44555543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=81.68  E-value=0.33  Score=24.06  Aligned_cols=20  Identities=20%  Similarity=0.348  Sum_probs=9.1

Q ss_pred             ccccccCCCCccc-chhhhHH
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      ++.|..|++.|.. ..|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHV   23 (30)
Confidence            3445555555442 3344443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=80.62  E-value=0.91  Score=22.79  Aligned_cols=6  Identities=17%  Similarity=0.755  Sum_probs=2.5

Q ss_pred             cCCCCc
Q 031516           47 FCEFPL   52 (158)
Q Consensus        47 ~C~~~~   52 (158)
                      .|++.|
T Consensus         9 ~C~k~f   14 (31)
T 1sp2_A            9 YCGKRF   14 (31)
T ss_dssp             TCCCBC
T ss_pred             CCCccc
Confidence            344443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=80.32  E-value=0.71  Score=22.75  Aligned_cols=18  Identities=22%  Similarity=0.497  Sum_probs=8.3

Q ss_pred             cccccCCCCccc-chhhhH
Q 031516           43 VTCDFCEFPLPA-VDLAEH   60 (158)
Q Consensus        43 v~C~~C~~~~~~-~~L~~H   60 (158)
                      +.|..|++.|.. ..|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            345555555443 344444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	158
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.65
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.12
d1k2fa_	190	SIAH, seven in absentia homolog {Mouse (Mus muscul	96.09
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.56
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.06
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	94.78
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	94.6
d1k2fa_	190	SIAH, seven in absentia homolog {Mouse (Mus muscul	94.2
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	93.83
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	93.6
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	93.49
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.35
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	92.86
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.13
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	91.96
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	91.83
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	91.66
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	91.54
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	91.39
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	91.2
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	91.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	90.31
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	89.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	89.55
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	89.45
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	89.08
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	88.86
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	88.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	88.69
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.55
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	88.19

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.3e-05  Score=48.29  Aligned_cols=47  Identities=17%  Similarity=0.441  Sum_probs=35.6

Q ss_pred             cccccccCCCCccc-chhhhHHh-hhcCcceeccCcccccchh-HHHHHHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE-VCGNRTELCHLCNRYIRLR-ERYNHES   88 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~   88 (158)
                      +++.|+ |++.|.. ..|..|+. +-++++..|..|++.+... .|..|++
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            577885 8888775 67888877 7888888888888876655 5777764

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=6.8e-05  Score=44.98  Aligned_cols=48  Identities=19%  Similarity=0.346  Sum_probs=41.8

Q ss_pred             ceecCccCChhhhh-hHHhhhhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           14 EQVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++..| .||..+.. ..|..|+...-..++..|..|++.|.. ..|..|+.
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            35689 59999996 899999998999999999999999985 77888874

>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: TRAF domain-like
superfamily: TRAF domain-like
family: SIAH, seven in absentia homolog
domain: SIAH, seven in absentia homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.09  E-value=0.0035  Score=46.57  Aligned_cols=45  Identities=31%  Similarity=0.491  Sum_probs=38.4

Q ss_pred             CCCCcccchhhhHHhhhcCcceecc----CcccccchhHHHHHHHHCCC
Q 031516           48 CEFPLPAVDLAEHQEVCGNRTELCH----LCNRYIRLRERYNHESRCTG   92 (158)
Q Consensus        48 C~~~~~~~~L~~H~~~C~~r~v~C~----~C~~~i~~~~l~~H~~~Cp~   92 (158)
                      |...++..++..|++.|..+|+.|+    .|+......++..|....+.
T Consensus        13 C~~~~~~~~~~~HE~~C~~~p~~C~~~~~~C~~~G~~~~l~~Hl~~~H~   61 (190)
T d1k2fa_          13 CEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK   61 (190)
T ss_dssp             CCCCCCGGGHHHHHHTCTTSCEECCSSSTTCCCEECHHHHHHHHHHSSC
T ss_pred             CCEeccccchhhHHhcCCCcccCCCCCCCCCccCCCHhHHHHHHHhcCC
Confidence            7788888888889889999998885    49888889999999987765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.0023  Score=36.26  Aligned_cols=33  Identities=18%  Similarity=0.354  Sum_probs=24.7

Q ss_pred             ccccccccCCCCccc-chhhhHHh--hhcCcceecc
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE--VCGNRTELCH   72 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~--~C~~r~v~C~   72 (158)
                      .+++.|..|++.|.. .+|..|+.  +-+++|..|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            467788888888875 67888853  7888888774

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.06  E-value=0.0064  Score=32.10  Aligned_cols=22  Identities=23%  Similarity=0.526  Sum_probs=13.6

Q ss_pred             cccccccCCCCccc-chhhhHHh
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      |++.|++|++.|.+ ..|..|+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH
T ss_pred             CcCCCCCCCCCCCCchHcccccC
Confidence            35666666666664 55666665

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.78  E-value=0.003  Score=37.08  Aligned_cols=35  Identities=17%  Similarity=0.391  Sum_probs=20.6

Q ss_pred             hhHHhhhhhcCCCcccccccc--CCCCccc-chhhhHHh
Q 031516           27 REILAIHKGENCPQRIVTCDF--CEFPLPA-VDLAEHQE   62 (158)
Q Consensus        27 r~~L~~H~~~~C~~R~v~C~~--C~~~~~~-~~L~~H~~   62 (158)
                      +..++.|.. +=..+++.|.+  |++.|.+ ..|..|+.
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcc
Confidence            445555552 45566666665  6666654 55666665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.008  Score=33.50  Aligned_cols=30  Identities=23%  Similarity=0.435  Sum_probs=20.2

Q ss_pred             hhhcCCCccccccccCCCCccc-chhhhHHh
Q 031516           33 HKGENCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        33 H~~~~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      |+...-..+++.|+.|++.|.. ++|..|+.
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCc
Confidence            4445556677777777777765 56777764

>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: TRAF domain-like
superfamily: TRAF domain-like
family: SIAH, seven in absentia homolog
domain: SIAH, seven in absentia homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.20  E-value=0.0089  Score=44.27  Aligned_cols=51  Identities=22%  Similarity=0.348  Sum_probs=42.2

Q ss_pred             eecCc----cCChhhhhhHHhhhhhcCCCcccccccc----CCCCcccchhhhHHhhhcC
Q 031516           15 QVACS----QCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQEVCGN   66 (158)
Q Consensus        15 ~V~C~----~C~~~i~r~~L~~H~~~~C~~R~v~C~~----C~~~~~~~~L~~H~~~C~~   66 (158)
                      .++|+    ||.+.+.-.++..|+ ..|.++++.|+.    |+-.-...+|..|....-.
T Consensus         3 ~~pC~~~~~GC~~~~~~~~~~~HE-~~C~~~p~~C~~~~~~C~~~G~~~~l~~Hl~~~H~   61 (190)
T d1k2fa_           3 LFPCKYASSGCEITLPHTEKAEHE-ELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK   61 (190)
T ss_dssp             CCCCTTGGGTCCCCCCGGGHHHHH-HTCTTSCEECCSSSTTCCCEECHHHHHHHHHHSSC
T ss_pred             eEecCCCCCCCCEeccccchhhHH-hcCCCcccCCCCCCCCCccCCCHhHHHHHHHhcCC
Confidence            35676    899999999999998 589999999965    8877778999999875433

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.83  E-value=0.016  Score=32.00  Aligned_cols=26  Identities=19%  Similarity=0.340  Sum_probs=15.0

Q ss_pred             CCCccccccccCCCCccc-chhhhHHh
Q 031516           37 NCPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        37 ~C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .-.++|+.|+.|++.|.. .+|..|+.
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHh
Confidence            344566666666666654 45566653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.60  E-value=0.014  Score=30.56  Aligned_cols=21  Identities=19%  Similarity=0.409  Sum_probs=10.1

Q ss_pred             cccccccCCCCccc-chhhhHH
Q 031516           41 RIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        41 R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      +|+.|+.|++.|.. ..|..|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~   23 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHI   23 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccC
Confidence            34455555555543 3444444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.024  Score=29.81  Aligned_cols=21  Identities=19%  Similarity=0.325  Sum_probs=13.1

Q ss_pred             ccccccCCCCccc-chhhhHHh
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      ++.|..|++.|.. ++|..|+.
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CEECCcCCCeecchHHhhhhcC
Confidence            5566666666664 55666665

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.008  Score=33.28  Aligned_cols=25  Identities=24%  Similarity=0.456  Sum_probs=11.9

Q ss_pred             CCCCccc-chhhhHHh-hhcCcceecc
Q 031516           48 CEFPLPA-VDLAEHQE-VCGNRTELCH   72 (158)
Q Consensus        48 C~~~~~~-~~L~~H~~-~C~~r~v~C~   72 (158)
                      |++.|.+ ..|..|+. +-+++|..|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            4544443 34555544 4555555543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.86  E-value=0.024  Score=31.21  Aligned_cols=31  Identities=23%  Similarity=0.520  Sum_probs=26.2

Q ss_pred             cCc--cCChhhhh-hHHhhhhhcCCCcccccccc
Q 031516           17 ACS--QCSETMER-EILAIHKGENCPQRIVTCDF   47 (158)
Q Consensus        17 ~C~--~C~~~i~r-~~L~~H~~~~C~~R~v~C~~   47 (158)
                      .|+  +|+..+.+ ..|..|+..+-..|+..|+|
T Consensus         3 ~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           3 SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             ECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             ECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            465  79999887 78999998888899999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.034  Score=31.16  Aligned_cols=33  Identities=21%  Similarity=0.461  Sum_probs=28.4

Q ss_pred             ceecCccCChhhhh-hHHhhhhh-cCCCccccccc
Q 031516           14 EQVACSQCSETMER-EILAIHKG-ENCPQRIVTCD   46 (158)
Q Consensus        14 ~~V~C~~C~~~i~r-~~L~~H~~-~~C~~R~v~C~   46 (158)
                      ++..|..||..|.+ .+|..|+. .+-..+++.|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            46789999999997 89999975 58889999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.96  E-value=0.024  Score=32.98  Aligned_cols=38  Identities=18%  Similarity=0.272  Sum_probs=31.4

Q ss_pred             cccchhhhHHhhhcCcceecc--Ccccccchh-HHHHHHHH
Q 031516           52 LPAVDLAEHQEVCGNRTELCH--LCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        52 ~~~~~L~~H~~~C~~r~v~C~--~C~~~i~~~-~l~~H~~~   89 (158)
                      ++...|+.|..+-++++..|.  +|++.+.+. .|..|+..
T Consensus         2 ~p~~~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_           2 LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             CCCSSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             CCcchhcchhhccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            566778888888999999996  599998877 58899864

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.83  E-value=0.028  Score=30.95  Aligned_cols=27  Identities=22%  Similarity=0.311  Sum_probs=23.0

Q ss_pred             hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           63 VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        63 ~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +-+++|..|+.|++.+..+ .|..|++.
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhc
Confidence            6789999999999998776 58899864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.66  E-value=0.059  Score=27.98  Aligned_cols=24  Identities=17%  Similarity=0.329  Sum_probs=19.9

Q ss_pred             CcceeccCcccccchh-HHHHHHHH
Q 031516           66 NRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        66 ~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      ++|..|+.|++.+.++ .|..|+++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCC
Confidence            4789999999998877 47799864

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.032  Score=28.66  Aligned_cols=20  Identities=25%  Similarity=0.365  Sum_probs=9.2

Q ss_pred             ccccccCCCCccc-chhhhHH
Q 031516           42 IVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        42 ~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      |+.|..|++.|.. +.|..|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~Hq   22 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQ   22 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCc
Confidence            4445555555443 3444444

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.39  E-value=0.06  Score=29.36  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=16.5

Q ss_pred             cCcceeccCcccccchh-HHHHHHHH
Q 031516           65 GNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        65 ~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +++|..|..|++.+..+ .|..|++.
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~   29 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCccccCCCCCCcccChHHHHHHccc
Confidence            56677777777776655 46677654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.20  E-value=0.051  Score=29.28  Aligned_cols=23  Identities=22%  Similarity=0.348  Sum_probs=11.5

Q ss_pred             ccccccccCCCCccc-chhhhHHh
Q 031516           40 QRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        40 ~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .+++.|..|++.|.. .+|..|+.
T Consensus         5 ekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           5 EKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCeeCCCCCCEeCchHHhHhhcc
Confidence            345555555555543 44555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.061  Score=28.38  Aligned_cols=21  Identities=24%  Similarity=0.499  Sum_probs=10.1

Q ss_pred             cccccc--CCCCccc-chhhhHHh
Q 031516           42 IVTCDF--CEFPLPA-VDLAEHQE   62 (158)
Q Consensus        42 ~v~C~~--C~~~~~~-~~L~~H~~   62 (158)
                      ++.|++  |++.|.. ..|..|+.
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CeeCCCCCCCceECChhHhhhhcC
Confidence            444544  5555543 34555543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.03  E-value=0.038  Score=30.20  Aligned_cols=24  Identities=21%  Similarity=0.451  Sum_probs=20.5

Q ss_pred             CccccccccCCCCccc-chhhhHHh
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      .++|+.|++|++.|.. .+|..|+.
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r   28 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCccccCCCCCCcccChHHHHHHcc
Confidence            4689999999999986 77999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=0.051  Score=29.75  Aligned_cols=23  Identities=13%  Similarity=0.299  Sum_probs=13.9

Q ss_pred             CccccccccCCCCccc-chhhhHH
Q 031516           39 PQRIVTCDFCEFPLPA-VDLAEHQ   61 (158)
Q Consensus        39 ~~R~v~C~~C~~~~~~-~~L~~H~   61 (158)
                      .++|+.|++|++.|.. .+|..|+
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHH
T ss_pred             CCCCEeCCCCcccccchHHHHHHc
Confidence            3566666666666654 4566664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.72  E-value=0.1  Score=28.44  Aligned_cols=27  Identities=15%  Similarity=0.260  Sum_probs=22.2

Q ss_pred             hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           63 VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        63 ~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +-+++|..|+.|++.+.++ +|..|+..
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHccc
Confidence            3578999999999998877 58899754

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.55  E-value=0.12  Score=26.38  Aligned_cols=23  Identities=17%  Similarity=0.319  Sum_probs=18.8

Q ss_pred             cceeccCcccccchh-HHHHHHHH
Q 031516           67 RTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        67 r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      +|..|..||+.+..+ .|..|+++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            478999999998876 58899864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.45  E-value=0.045  Score=30.21  Aligned_cols=30  Identities=13%  Similarity=0.209  Sum_probs=24.4

Q ss_pred             HHh-hhcCcceeccCcccccchh-HHHHHHHH
Q 031516           60 HQE-VCGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        60 H~~-~C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      |+. +-+++|..|..|++.+... .|..|+.+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCcc
Confidence            554 6788999999999998766 68899864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.079  Score=27.85  Aligned_cols=6  Identities=17%  Similarity=0.495  Sum_probs=2.5

Q ss_pred             CCCCcc
Q 031516           48 CEFPLP   53 (158)
Q Consensus        48 C~~~~~   53 (158)
                      |++.|.
T Consensus        10 Cgk~F~   15 (30)
T d1ubdc3          10 CGKRFS   15 (30)
T ss_dssp             CCCEES
T ss_pred             CCceEC
Confidence            444443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.08  E-value=0.14  Score=27.82  Aligned_cols=26  Identities=23%  Similarity=0.431  Sum_probs=17.2

Q ss_pred             hcCcceeccCcccccchh-HHHHHHHH
Q 031516           64 CGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        64 C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      -+++|..|..|++.+... .|..|++.
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~   30 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKR   30 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcc
Confidence            456777777777776555 46677664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.86  E-value=0.11  Score=27.66  Aligned_cols=22  Identities=32%  Similarity=0.673  Sum_probs=11.3

Q ss_pred             ccccccc--CCCCccc-chhhhHHh
Q 031516           41 RIVTCDF--CEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~--C~~~~~~-~~L~~H~~   62 (158)
                      |++.|++  |++.|.+ ++|..|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r   26 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhh
Confidence            4555554  5555553 44555543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.80  E-value=0.081  Score=28.82  Aligned_cols=25  Identities=16%  Similarity=0.319  Sum_probs=21.0

Q ss_pred             CCccccccccCCCCccc-chhhhHHh
Q 031516           38 CPQRIVTCDFCEFPLPA-VDLAEHQE   62 (158)
Q Consensus        38 C~~R~v~C~~C~~~~~~-~~L~~H~~   62 (158)
                      -..+|+.|..|++.|.. ..|..|+.
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r   29 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFK   29 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCc
Confidence            35789999999999986 77999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=88.69  E-value=0.12  Score=26.88  Aligned_cols=24  Identities=21%  Similarity=0.418  Sum_probs=19.6

Q ss_pred             cceeccCcccccchh-HHHHHHHHC
Q 031516           67 RTELCHLCNRYIRLR-ERYNHESRC   90 (158)
Q Consensus        67 r~v~C~~C~~~i~~~-~l~~H~~~C   90 (158)
                      +|..|+.|++.+.+. .|..|+.+-
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~H   25 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCcc
Confidence            478999999998877 588998753

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.55  E-value=0.12  Score=26.76  Aligned_cols=22  Identities=27%  Similarity=0.557  Sum_probs=12.4

Q ss_pred             ccccccc--CCCCccc-chhhhHHh
Q 031516           41 RIVTCDF--CEFPLPA-VDLAEHQE   62 (158)
Q Consensus        41 R~v~C~~--C~~~~~~-~~L~~H~~   62 (158)
                      |++.|++  |++.|.. .+|..|+.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh
Confidence            3555655  6666654 45666653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.19  E-value=0.17  Score=27.07  Aligned_cols=26  Identities=15%  Similarity=0.271  Sum_probs=21.7

Q ss_pred             hcCcceeccCcccccchh-HHHHHHHH
Q 031516           64 CGNRTELCHLCNRYIRLR-ERYNHESR   89 (158)
Q Consensus        64 C~~r~v~C~~C~~~i~~~-~l~~H~~~   89 (158)
                      -+++|..|..|++.+... +|..|+++
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccc
Confidence            468999999999997766 68899874