Citrus Sinensis ID: 031552


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
cHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHccc
ccHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHEEEcc
MDIAHFLFGVFGNATALFLFLAPTITFRRIVrrksteqfsgiPYVMTLLNCLLSawyglpfvsknnILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRksteqfsgipYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGlfmlvltvfaavalvsllafHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
**IAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSL****
*DIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLI*
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiii
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNARKIFCGFAATIFSIIMYASPLSIMVSSLNLIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query157 2.2.26 [Sep-21-2011]
Q8L9J7247 Bidirectional sugar trans yes no 0.949 0.603 0.798 4e-65
Q8RZQ8 273 Bidirectional sugar trans yes no 0.942 0.542 0.702 4e-55
Q60EC2 261 Bidirectional sugar trans no no 0.942 0.567 0.691 3e-47
B8AYH1 261 Bidirectional sugar trans N/A no 0.942 0.567 0.691 3e-47
Q5JJY5243 Bidirectional sugar trans no no 0.942 0.609 0.452 5e-31
A2WR31243 Bidirectional sugar trans N/A no 0.942 0.609 0.452 5e-31
Q5N8J1230 Bidirectional sugar trans no no 0.942 0.643 0.442 5e-30
B8A833230 Bidirectional sugar trans N/A no 0.942 0.643 0.442 5e-30
Q5NAZ9252 Bidirectional sugar trans no no 0.878 0.547 0.432 7e-28
Q0J349 265 Bidirectional sugar trans no no 0.936 0.554 0.453 1e-27
>sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1 Back     alignment and function desciption
 Score =  246 bits (628), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 132/149 (88%)

Query: 1   MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLP 60
           M+IAH +FGVFGNATALFLFLAP+ITF+RI++ KSTEQFSGIPY MTLLNCLLSAWYGLP
Sbjct: 1   MNIAHTIFGVFGNATALFLFLAPSITFKRIIKNKSTEQFSGIPYPMTLLNCLLSAWYGLP 60

Query: 61  FVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLA 120
           FVSK+N LVSTINGTG+ IE +YVLIFL +APKKEK KIFG+F  VL VFA VALVSL A
Sbjct: 61  FVSKDNTLVSTINGTGAVIETVYVLIFLFYAPKKEKIKIFGIFSCVLAVFATVALVSLFA 120

Query: 121 FHGNARKIFCGFAATIFSIIMYASPLSIM 149
             GN RK+FCG AAT+FSIIMYASPLSIM
Sbjct: 121 LQGNGRKLFCGLAATVFSIIMYASPLSIM 149




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane. Can transport glucose, and, to a lower extent, mannose, fructose and galactose.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8RZQ8|SWT1A_ORYSJ Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1 Back     alignment and function description
>sp|Q60EC2|SWT1B_ORYSJ Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica GN=SWEET1B PE=2 SV=1 Back     alignment and function description
>sp|B8AYH1|SWT1B_ORYSI Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1 Back     alignment and function description
>sp|Q5JJY5|SWT2A_ORYSJ Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1 Back     alignment and function description
>sp|A2WR31|SWT2A_ORYSI Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A PE=3 SV=2 Back     alignment and function description
>sp|Q5N8J1|SWT2B_ORYSJ Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. japonica GN=SWEET2B PE=2 SV=1 Back     alignment and function description
>sp|B8A833|SWT2B_ORYSI Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. indica GN=SWEET2B PE=3 SV=1 Back     alignment and function description
>sp|Q5NAZ9|SWT3B_ORYSJ Bidirectional sugar transporter SWEET3b OS=Oryza sativa subsp. japonica GN=SWEET3B PE=3 SV=2 Back     alignment and function description
>sp|Q0J349|SWT7B_ORYSJ Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
224085065248 predicted protein [Populus trichocarpa] 0.949 0.600 0.818 7e-66
255570438248 conserved hypothetical protein [Ricinus 0.949 0.600 0.805 4e-65
297850564247 nodulin MtN3 family protein [Arabidopsis 0.949 0.603 0.805 3e-64
224062950250 predicted protein [Populus trichocarpa] 0.949 0.596 0.805 4e-64
224062952250 predicted protein [Populus trichocarpa] 0.949 0.596 0.805 5e-64
356509332247 PREDICTED: bidirectional sugar transport 0.949 0.603 0.791 6e-64
356515971247 PREDICTED: bidirectional sugar transport 0.949 0.603 0.791 1e-63
18394992247 Nodulin MtN3-like protein [Arabidopsis t 0.949 0.603 0.798 2e-63
255637929247 unknown [Glycine max] 0.949 0.603 0.778 1e-62
388492524247 unknown [Lotus japonicus] 0.949 0.603 0.751 1e-59
>gi|224085065|ref|XP_002307476.1| predicted protein [Populus trichocarpa] gi|222856925|gb|EEE94472.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  254 bits (650), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/149 (81%), Positives = 134/149 (89%)

Query: 1   MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLP 60
           MD+ HFLFGVFGNATALFLFLAPTITF+RI+R KS EQFSGIPYVMTLLNCLLSAWYGLP
Sbjct: 1   MDVLHFLFGVFGNATALFLFLAPTITFKRIIRSKSIEQFSGIPYVMTLLNCLLSAWYGLP 60

Query: 61  FVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLA 120
           FVSKNN+LVSTING GSAIE IYVLIF+++APKKEKAK+ GL  LV+T+F  VALVSL A
Sbjct: 61  FVSKNNVLVSTINGAGSAIETIYVLIFIIYAPKKEKAKVLGLLTLVITIFTGVALVSLFA 120

Query: 121 FHGNARKIFCGFAATIFSIIMYASPLSIM 149
            HGNARK+FCG AA +FSIIMY SPLSIM
Sbjct: 121 LHGNARKLFCGCAAAVFSIIMYGSPLSIM 149




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570438|ref|XP_002526178.1| conserved hypothetical protein [Ricinus communis] gi|223534555|gb|EEF36254.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297850564|ref|XP_002893163.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] gi|297339005|gb|EFH69422.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224062950|ref|XP_002300944.1| predicted protein [Populus trichocarpa] gi|222842670|gb|EEE80217.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224062952|ref|XP_002300945.1| predicted protein [Populus trichocarpa] gi|222842671|gb|EEE80218.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356509332|ref|XP_003523404.1| PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] Back     alignment and taxonomy information
>gi|356515971|ref|XP_003526670.1| PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max] Back     alignment and taxonomy information
>gi|18394992|ref|NP_564140.1| Nodulin MtN3-like protein [Arabidopsis thaliana] gi|75154590|sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gi|21594011|gb|AAM65929.1| unknown [Arabidopsis thaliana] gi|28393568|gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gi|28973143|gb|AAO63896.1| unknown protein [Arabidopsis thaliana] gi|332191983|gb|AEE30104.1| Nodulin MtN3-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255637929|gb|ACU19281.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388492524|gb|AFK34328.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
TAIR|locus:2026997247 SWEET1 [Arabidopsis thaliana ( 0.949 0.603 0.711 4.9e-53
UNIPROTKB|Q8RZQ8 273 SWEET1A "Bidirectional sugar t 0.936 0.538 0.632 1e-45
UNIPROTKB|B8AYH1 261 SWEET1B "Bidirectional sugar t 0.942 0.567 0.597 4e-42
UNIPROTKB|Q60EC2 261 SWEET1B "Bidirectional sugar t 0.942 0.567 0.597 4e-42
UNIPROTKB|B8A833230 SWEET2B "Bidirectional sugar t 0.936 0.639 0.4 5.2e-26
UNIPROTKB|Q5N8J1230 SWEET2B "Bidirectional sugar t 0.936 0.639 0.4 5.2e-26
UNIPROTKB|A2WR31243 SWEET2A "Bidirectional sugar t 0.942 0.609 0.391 6.6e-26
UNIPROTKB|Q5JJY5243 SWEET2A "Bidirectional sugar t 0.942 0.609 0.391 6.6e-26
UNIPROTKB|Q0J349 265 SWEET7B "Bidirectional sugar t 0.942 0.558 0.402 4.6e-25
TAIR|locus:2099362236 SWEET2 "AT3G14770" [Arabidopsi 0.898 0.597 0.382 4.6e-25
TAIR|locus:2026997 SWEET1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 106/149 (71%), Positives = 118/149 (79%)

Query:     1 MDIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLP 60
             M+IAH +FGVFGNATALFLFLAP+ITF+RI++ KSTEQFSGIPY MTLLNCLLSAWYGLP
Sbjct:     1 MNIAHTIFGVFGNATALFLFLAPSITFKRIIKNKSTEQFSGIPYPMTLLNCLLSAWYGLP 60

Query:    61 FVSKNNILVSTINGTGSAIEIIYVLIFLLFAPKKEKAKIFGXXXXXXXXXXXXXXXXXXX 120
             FVSK+N LVSTINGTG+ IE +YVLIFL +APKKEK KIFG                   
Sbjct:    61 FVSKDNTLVSTINGTGAVIETVYVLIFLFYAPKKEKIKIFGIFSCVLAVFATVALVSLFA 120

Query:   121 XHGNARKIFCGFAATIFSIIMYASPLSIM 149
               GN RK+FCG AAT+FSIIMYASPLSIM
Sbjct:   121 LQGNGRKLFCGLAATVFSIIMYASPLSIM 149




GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=ISS
GO:0005887 "integral to plasma membrane" evidence=IDA
GO:0051119 "sugar transmembrane transporter activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|B8A833 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5N8J1 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2WR31 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5JJY5 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q0J349 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2099362 SWEET2 "AT3G14770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L9J7SWET1_ARATHNo assigned EC number0.79860.94900.6032yesno
Q8RZQ8SWT1A_ORYSJNo assigned EC number0.70270.94260.5421yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 3e-16
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score = 69.1 bits (170), Expect = 3e-16
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 6  FLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKN 65
          FL G+     ++ +FL+P    R++++ KS E    +P++  LL+  L   YGL    K 
Sbjct: 1  FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGL---LKK 57

Query: 66 NILVSTINGTGSAIEIIYVLIFLLFAPKK 94
          +  +   NG G  +  IY+++F+++ PKK
Sbjct: 58 DGYIIIPNGVGCVLGTIYLILFIIYPPKK 86


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 157
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.9
KOG1623243 consensus Multitransmembrane protein [General func 99.6
COG409589 Uncharacterized conserved protein [Function unknow 99.38
PF0419361 PQ-loop: PQ loop repeat 98.42
TIGR00951220 2A43 Lysosomal Cystine Transporter. 97.51
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 97.21
smart0067932 CTNS Repeated motif present between transmembrane 95.5
TIGR00951220 2A43 Lysosomal Cystine Transporter. 93.05
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 93.04
KOG1589118 consensus Uncharacterized conserved protein [Funct 91.58
PHA02246192 hypothetical protein 91.48
KOG2913 260 consensus Predicted membrane protein [Function unk 90.55
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=1e-34  Score=227.83  Aligned_cols=152  Identities=42%  Similarity=0.768  Sum_probs=128.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccCcccchHHHHHHHHHHHHHHHhccccccCCceeEeeccchhhhHH
Q 031552            2 DIAHFLFGVFGNATALFLFLAPTITFRRIVRRKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGSAIEI   81 (157)
Q Consensus         2 ~~~~~iv~~lg~~~ti~~~~spl~~~~~i~k~kst~~~s~~p~~~~~~n~~lW~~YG~~~l~~~~~~i~~~N~~G~~l~~   81 (157)
                      +....++|++|++.++++|++|+|+++||+|+||+|++|+.||+++++||.+|+.||.  +.+||..++.+|++|++++.
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~--~~~~d~llitIN~~G~~ie~   80 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGL--LKVHDYLLITINGIGLVIET   80 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhh--hccCceEEEEEehhcHHHHH
Confidence            4678899999999999999999999999999999999999999999999999999998  56557899999999999999


Q ss_pred             HHHhHHhhccCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-eeeecchHHHHHHHHHHHhhhhHHhccccccC
Q 031552           82 IYVLIFLLFAPKKEKAKIFGLFMLVLTVFAAVALVSLLAFHGNA-RKIFCGFAATIFSIIMYASPLSIMVSSLNLIN  157 (157)
Q Consensus        82 ~y~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~i~~yasPL~~l~~Vik~~~  157 (157)
                      +|+..|+.|+++|+..+..  .......+++...+++...|+++ |.+.+|.+|+++|++||||||+.||+|||++.
T Consensus        81 ~Yi~~f~~ya~~k~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkS  155 (243)
T KOG1623|consen   81 VYISIFLYYAPKKKTVKIV--LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKS  155 (243)
T ss_pred             HHHHHHheecCchheeEee--ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCc
Confidence            9999999999888732211  12222223333345666677666 68999999999999999999999999999874



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00