Citrus Sinensis ID: 031581

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEccEEEEEEEEEHHHHccccccccccccccccccccccccccEEEEEEccccEEEEEccccccccEEEcccccccEEEcEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccEcEccccccEEEEEEEEEEEEEEcEEEEEEEEccccHHHcccccccccccccccEEccccccccEEEEEEccccEEEcccccccccEEEEEcccccccccccEccHHHccccc
Coil and Loop (DISEMBL)
mslapsvtrlhspflccplnklsssattvslsqrnqrssapypciraeldqnTVVAISVGLVSVAVGIGIPifyetqidnaakrentqpcfpcsgsgaqrcrfcmgtgsvtvelggderefskcincdgvgsltcttcqgtgiqpryldrrefkddd
Flexible Loop (DISEMBL)
mslapsvtrlhspflcCPLNKLSSSATtvslsqrnqrssapyPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCdgvgsltcttcqgtgiqpryldrrefkddd
Low Complexity Region (SEG)
MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD
Disordered region (IsUnstruct)
**********HSPFLCCPLN*********************YPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYL*********
Disordered Region (DISOPRED)
****************************************************TVVAISVGLVSVAVGIGIPIFYETQID*****E*TQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREF****
Disordered Region (DISEMBL)
MSLAPSVTRLHSPFLCCPLNKLS****************APYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD
Disordered Region (DISPRO)
*************FLCCP**K*****************SAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREF****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q8GSJ6	154	Protein disulfide-isomera	yes	no	0.949	0.967	0.741	1e-61
P35191	511	DnaJ homolog 1, mitochond	yes	no	0.350	0.107	0.373	8e-05

>sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1 PE=1 SV=1

 Score =  234 bits (598), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/155 (74%), Positives = 130/155 (83%), Gaps = 6/155 (3%)

Query: 4   APSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRS-SAPYPCIRAELDQNTVVAISVGLV 62
           APS  RLHSPF+ CP+N      T  S S RN RS S  YP I+AELD NTVVAISVG+ 
Sbjct: 5   APSPPRLHSPFIHCPIN-----FTPSSFSARNLRSPSTSYPRIKAELDPNTVVAISVGVA 59

Query: 63  SVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFS 122
           SVA+GIGIP+FYETQIDNAAKRENTQPCFPC+G+GAQ+CR C+G+G+VTVELGG E+E S
Sbjct: 60  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 119

Query: 123 KCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
            CINCDG GSLTCTTCQG+G+QPRYLDRREFKDDD
Sbjct: 120 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

Protein disulfide-isomerase probably involved in maintaining photosystem II (PSII) activity under high light by regulating repair and reassembly of PSII complexes.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 3EC: .EC: 4EC: .EC: 1

>sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MDJ1 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 12/67 (17%)

Query: 89  PCFPCSGSGAQ------RCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL-----TCTT 137
           PC  CSG+G +       C  C GTG+ TV + G  +  S C  C+G G++      CT 
Sbjct: 229 PCSTCSGTGMKPNTHKVSCSTCHGTGT-TVHIRGGFQMMSTCPTCNGEGTMKRPQDNCTK 287

Query: 138 CQGTGIQ 144
           C G G+Q
Sbjct: 288 CHGEGVQ 294

Plays a role in mitochondrial biogenesis and protein folding.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
255538908	156	conserved hypothetical protein [Ricinus	0.987	0.993	0.816	5e-69
449437216	157	PREDICTED: protein disulfide-isomerase L	0.993	0.993	0.791	6e-67
224062017	159	predicted protein [Populus trichocarpa]	1.0	0.987	0.773	3e-66
118489193	159	unknown [Populus trichocarpa x Populus d	1.0	0.987	0.767	5e-65
351727697	157	uncharacterized protein LOC100305711 [Gl	0.955	0.955	0.761	4e-61
224085841	175	predicted protein [Populus trichocarpa]	0.961	0.862	0.759	4e-60
15222330	154	DnaJ/Hsp40 cysteine-rich domain-containi	0.949	0.967	0.741	7e-60
388492084	156	unknown [Lotus japonicus]	0.961	0.967	0.716	3e-59
357438369	157	hypothetical protein MTR_1g024840 [Medic	0.968	0.968	0.706	1e-56
225458009	158	PREDICTED: uncharacterized protein LOC10	1.0	0.993	0.784	6e-55

>gi|255538908|ref|XP_002510519.1| conserved hypothetical protein [Ricinus communis] gi|223551220|gb|EEF52706.1| conserved hypothetical protein [Ricinus communis]

 Score =  265 bits (677), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 129/158 (81%), Positives = 143/158 (90%), Gaps = 3/158 (1%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRA-ELDQNTVVAISV 59
           M LAPS+ RLHSPFLCCPL   + +A+  SL  RNQRSS+ YPCIRA +LDQNTVVAISV
Sbjct: 1   MPLAPSIPRLHSPFLCCPLKTSTLTASCKSL--RNQRSSSSYPCIRAIDLDQNTVVAISV 58

Query: 60  GLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDER 119
           G+VS+A+GIGIP+FYETQIDNAAKRENTQPCFPC+GSGAQRCRFC GTGSVTVELGG+E+
Sbjct: 59  GVVSIAIGIGIPVFYETQIDNAAKRENTQPCFPCNGSGAQRCRFCTGTGSVTVELGGEEK 118

Query: 120 EFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           E S+CINCDG GSLTCTTCQGTGIQPRYLDRREFKDDD
Sbjct: 119 EVSRCINCDGAGSLTCTTCQGTGIQPRYLDRREFKDDD 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437216|ref|XP_004136388.1| PREDICTED: protein disulfide-isomerase LQY1-like [Cucumis sativus] gi|449505746|ref|XP_004162556.1| PREDICTED: protein disulfide-isomerase LQY1-like [Cucumis sativus]

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/158 (79%), Positives = 143/158 (90%), Gaps = 2/158 (1%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRA-ELDQNTVVAISV 59
           M++APS++RLHSPFL CPL    S++ +V+ S  NQRS   YP IRA +LDQNTVVA+SV
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTPSTSLSVTFSG-NQRSPPSYPRIRAIDLDQNTVVALSV 59

Query: 60  GLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDER 119
           GLVSVA+GIGIP+FYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTG+VTVELGGD++
Sbjct: 60  GLVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDDK 119

Query: 120 EFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           E S+CINCDGVG+LTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 120 EVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062017|ref|XP_002300713.1| predicted protein [Populus trichocarpa] gi|222842439|gb|EEE79986.1| predicted protein [Populus trichocarpa]

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/159 (77%), Positives = 144/159 (90%), Gaps = 2/159 (1%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRN-QRSSAPYPCIRA-ELDQNTVVAIS 58
           M +APS+ RLHSPFLCCPLN +SSS ++   ++ + QRS   YPCIRA +LDQNT+VAIS
Sbjct: 1   MPVAPSIPRLHSPFLCCPLNNISSSLSSFKSARHHPQRSPVSYPCIRAIDLDQNTIVAIS 60

Query: 59  VGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDE 118
           VG+VS+A GIGIP+FYE+QIDNAAKR+NTQPCFPCSGSGAQ+CRFC+GTGSVTVELGGDE
Sbjct: 61  VGVVSIAAGIGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGSVTVELGGDE 120

Query: 119 REFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           +E S+CINCDG+GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 121 KEVSRCINCDGIGSLTCTTCQGSGIQPRYLDRREFKDDD 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489193|gb|ABK96403.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  252 bits (643), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 122/159 (76%), Positives = 143/159 (89%), Gaps = 2/159 (1%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRN-QRSSAPYPCIRA-ELDQNTVVAIS 58
           M +APS+ RLHSPFL CPLN +SSS ++   ++ + QRS   YPCIRA +LDQNT+VAIS
Sbjct: 1   MPVAPSIPRLHSPFLRCPLNNISSSLSSFKSARHHPQRSPVSYPCIRAIDLDQNTIVAIS 60

Query: 59  VGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDE 118
           VG+VS+A GIGIP+FYE+QIDNAAKR+NTQPCFPCSGSGAQ+CRFC+GTGSVTVELGGDE
Sbjct: 61  VGVVSIAAGIGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGSVTVELGGDE 120

Query: 119 REFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           +E S+CINCDG+GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 121 KEVSRCINCDGIGSLTCTTCQGSGIQPRYLDRREFKDDD 159

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727697|ref|NP_001235634.1| uncharacterized protein LOC100305711 [Glycine max] gi|255626385|gb|ACU13537.1| unknown [Glycine max]

 Score =  238 bits (608), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/159 (76%), Positives = 139/159 (87%), Gaps = 9/159 (5%)

Query: 3   LAPSVT--RLHSPFLCCPL-NKLSSSATTVSLSQRNQRSSAPYPCIRA-ELDQNTVVAIS 58
           L+PS++  +LHS FLCCPL +KLSSSAT      R Q+    YP IRA +LDQNTVVAIS
Sbjct: 4   LSPSLSLPKLHSSFLCCPLKSKLSSSAT-----NRIQQKPTSYPRIRALDLDQNTVVAIS 58

Query: 59  VGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDE 118
           VGLVSVAVGIGIP+FYETQIDNAAKR+NTQPCFPC+GSG+Q+CRFC+G+G+VTVELGG E
Sbjct: 59  VGLVSVAVGIGIPVFYETQIDNAAKRDNTQPCFPCNGSGSQKCRFCLGSGNVTVELGGGE 118

Query: 119 REFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           +E S+CINCD VGSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 119 KEVSRCINCDAVGSLTCTTCQGSGIQPRYLDRREFKDDD 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085841|ref|XP_002307712.1| predicted protein [Populus trichocarpa] gi|222857161|gb|EEE94708.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (600), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 117/154 (75%), Positives = 136/154 (88%), Gaps = 3/154 (1%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRN--QRSSAPYPCIRA-ELDQNTVVAI 57
           M +APS+ RLHSPFLCC L ++SSS+ +   S RN  QRS   +PCIRA +LDQNT+VAI
Sbjct: 1   MPVAPSIPRLHSPFLCCHLQEISSSSLSSFKSPRNNHQRSPVSHPCIRAVDLDQNTIVAI 60

Query: 58  SVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGD 117
           SVG VS+AVGIGIP+FYE+QIDNAAKRENTQPCFPCSGSGAQ+CRFC+GTGSVT+ELGGD
Sbjct: 61  SVGAVSIAVGIGIPVFYESQIDNAAKRENTQPCFPCSGSGAQKCRFCLGTGSVTLELGGD 120

Query: 118 EREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRR 151
           ++E S CINC+GVGSLTCTTCQG+GIQPRYLDRR
Sbjct: 121 DKEVSPCINCEGVGSLTCTTCQGSGIQPRYLDRR 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222330|ref|NP_177698.1| DnaJ/Hsp40 cysteine-rich domain-containing protein [Arabidopsis thaliana] gi|75150317|sp|Q8GSJ6.1|LQY1_ARATH RecName: Full=Protein disulfide-isomerase LQY1; AltName: Full=Protein LOW QUANTUM YIELD OF PHOTOSYSTEM II 1; Flags: Precursor gi|26450801|dbj|BAC42509.1| unknown protein [Arabidopsis thaliana] gi|27311545|gb|AAO00738.1| unknown protein [Arabidopsis thaliana] gi|30102874|gb|AAP21355.1| At1g75690 [Arabidopsis thaliana] gi|332197625|gb|AEE35746.1| DnaJ/Hsp40 cysteine-rich domain-containing protein [Arabidopsis thaliana]

 Score =  234 bits (598), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/155 (74%), Positives = 130/155 (83%), Gaps = 6/155 (3%)

Query: 4   APSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRS-SAPYPCIRAELDQNTVVAISVGLV 62
           APS  RLHSPF+ CP+N      T  S S RN RS S  YP I+AELD NTVVAISVG+ 
Sbjct: 5   APSPPRLHSPFIHCPIN-----FTPSSFSARNLRSPSTSYPRIKAELDPNTVVAISVGVA 59

Query: 63  SVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFS 122
           SVA+GIGIP+FYETQIDNAAKRENTQPCFPC+G+GAQ+CR C+G+G+VTVELGG E+E S
Sbjct: 60  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 119

Query: 123 KCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
            CINCDG GSLTCTTCQG+G+QPRYLDRREFKDDD
Sbjct: 120 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492084|gb|AFK34108.1| unknown [Lotus japonicus]

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 116/162 (71%), Positives = 134/162 (82%), Gaps = 11/162 (6%)

Query: 1   MSLAPSVT--RLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAP--YPCIRA-ELDQNTVV 55
           M+LAPS++    HS FLCCPL +        S S RN+    P  YP IRA E DQNTV+
Sbjct: 1   MTLAPSLSLPHFHSSFLCCPLKQ------PFSPSSRNRIQPKPTSYPRIRALEFDQNTVI 54

Query: 56  AISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELG 115
           AI+VG+ SVA+GIGIP+FYE+QIDNAAKR+NTQPCFPCSGSGAQ+CRFC+GTG+VTVELG
Sbjct: 55  AITVGVASVAIGIGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGNVTVELG 114

Query: 116 GDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           GDE+E S+CINCDG GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 115 GDEKEVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438369|ref|XP_003589460.1| hypothetical protein MTR_1g024840 [Medicago truncatula] gi|355478508|gb|AES59711.1| hypothetical protein MTR_1g024840 [Medicago truncatula]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/160 (70%), Positives = 132/160 (82%), Gaps = 8/160 (5%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAP--YPCIRA-ELDQNTVVAI 57
           +S + S+ +LHS FL  PL  LS++        RN+    P  YP IRA ELDQNTVVAI
Sbjct: 3   ISCSLSLPQLHSSFLSSPLKSLSTTPLA-----RNKFQPKPTFYPRIRALELDQNTVVAI 57

Query: 58  SVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGD 117
           +VG++SVAVGIGIP+FYE+QIDNAAKR+NTQPCFPC+GSGAQ+CRFC+GTG+VTVELGG 
Sbjct: 58  TVGVLSVAVGIGIPVFYESQIDNAAKRDNTQPCFPCNGSGAQKCRFCLGTGNVTVELGGA 117

Query: 118 EREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           E E S+CINCDG GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 118 ETEVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD 157

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458009|ref|XP_002276528.1| PREDICTED: uncharacterized protein LOC100267764 [Vitis vinifera] gi|302142644|emb|CBI19847.3| unnamed protein product [Vitis vinifera]

 Score =  218 bits (555), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/158 (78%), Positives = 137/158 (86%), Gaps = 1/158 (0%)

Query: 1   MSLAPSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRA-ELDQNTVVAISV 59
           MS+APS+ RLHS F+CCPL   S S +      RN+RS A YP IRA +LDQNT+VAISV
Sbjct: 1   MSIAPSLPRLHSSFICCPLKLSSPSPSLSHKFARNRRSPASYPRIRALDLDQNTIVAISV 60

Query: 60  GLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDER 119
           G+VSVAVGIG+PIFYETQIDNAAKRENTQPCFPC GSGAQRCRFCMGTG+VTV LGGDE+
Sbjct: 61  GVVSVAVGIGVPIFYETQIDNAAKRENTQPCFPCDGSGAQRCRFCMGTGNVTVVLGGDEK 120

Query: 120 EFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           E S+CINCDG GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 121 EVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD 158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
TAIR|locus:2005585	154	LQY1 "LOW QUANTUM YIELD OF PHO	0.949	0.967	0.741	2.2e-59
TAIR|locus:2044812	186	EDA3 "embryo sac development a	0.859	0.725	0.286	8.4e-10
TAIR|locus:2047426	144	AT2G24860 [Arabidopsis thalian	0.388	0.423	0.312	2.1e-06
TAIR|locus:2009482	110	AT1G22630 [Arabidopsis thalian	0.382	0.545	0.338	8.1e-05
ZFIN|ZDB-GENE-060421-4694	382	zgc:136895 "zgc:136895" [Danio	0.337	0.138	0.431	0.00019
SGD|S000001878	511	MDJ1 "Co-chaperone that stimul	0.350	0.107	0.373	0.00041
UNIPROTKB|G4N8Z4	59	MGG_17224 "Uncharacterized pro	0.324	0.864	0.355	0.00052
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.343	0.145	0.378	0.00053
TAIR|locus:2151556	307	AT5G61670 "AT5G61670" [Arabido	0.490	0.250	0.292	0.00076
TAIR|locus:504955942	132	AT2G24395 "AT2G24395" [Arabido	0.401	0.477	0.283	0.00096

TAIR|locus:2005585 LQY1 "LOW QUANTUM YIELD OF PHOTOSYSTEM II 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 115/155 (74%), Positives = 130/155 (83%)

Query:     4 APSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRS-SAPYPCIRAELDQNTVVAISVGLV 62
             APS  RLHSPF+ CP+N      T  S S RN RS S  YP I+AELD NTVVAISVG+ 
Sbjct:     5 APSPPRLHSPFIHCPIN-----FTPSSFSARNLRSPSTSYPRIKAELDPNTVVAISVGVA 59

Query:    63 SVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFS 122
             SVA+GIGIP+FYETQIDNAAKRENTQPCFPC+G+GAQ+CR C+G+G+VTVELGG E+E S
Sbjct:    60 SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 119

Query:   123 KCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
              CINCDG GSLTCTTCQG+G+QPRYLDRREFKDDD
Sbjct:   120 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0003756 "protein disulfide isomerase activity" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010206 "photosystem II repair" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2044812 EDA3 "embryo sac development arrest 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 41/143 (28%), Positives = 59/143 (41%)

Query:     4 APSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVS 63
             AP+  R+      CP N+   S  + S S+   ++      +         V  S  L+S
Sbjct:    21 APNRNRVRVLAKSCPENQSFDSNDSDSSSETTHKAQGDQKSVSRRQWMTACVCASAALIS 80

Query:    64 VAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTG---SVTVELGGDERE 120
              +       F   Q   A  ++    C  C GSGA  C  C GTG   ++  +   D  E
Sbjct:    81 NSY-----TFVSVQSAAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYE 135

Query:   121 FSKCINCDGVGSLTCTTCQGTGI 143
             F++C NC G G L C  C GTG+
Sbjct:   136 FTECPNCYGRGKLVCPVCLGTGL 158

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009561 "megagametogenesis" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

TAIR|locus:2047426 AT2G24860 [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query:    90 CFPCSGSGAQRCRFCMGTGSVTVE---LGGDEREFSKCINCDGVGSLTCTTCQGTGIQPR 146
             C  C+  G   C++C GTG   +    L       + C+ C G GS +C+ C+GTG + +
Sbjct:    76 CSSCNSKGHVECKWCAGTGFFILGDNMLCQVPSRNTSCVICSGQGSASCSDCKGTGFRAK 135

Query:   147 YLDR 150
             +L++
Sbjct:   136 WLEK 139

GO:0005576 "extracellular region" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2009482 AT1G22630 [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 21/62 (33%), Positives = 26/62 (41%)

Query:    90 CFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLD 149
             C  C   GA  C  C GTG    +  G+  E  KC +C G G  +C  C   G+ P    
Sbjct:    51 CETCGAKGAIECPGCKGTGKN--KKNGNMFERWKCFDCQGFGMKSCPKCGKGGLTPEQRG 108

Query:   150 RR 151
              R
Sbjct:   109 ER 110

GO:0009507 "chloroplast" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-060421-4694 zgc:136895 "zgc:136895" [Danio rerio (taxid:7955)]

 Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
 Identities = 25/58 (43%), Positives = 29/58 (50%)

Query:    90 CFPCSGSGAQRCRFCMGTG---SVTVELGGD--EREFSKCINCDGVGSLTCTTCQGTG 142
             C  C  SG  RC  C GTG   S   +  G        +C +C GVGS+TC TCQG G
Sbjct:   195 CSKCVNSGRTRCGHCSGTGWRSSPERQRCGSCSGSGMIRCHSCGGVGSITCKTCQGHG 252

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

SGD|S000001878 MDJ1 "Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 107 (42.7 bits), Expect = 0.00041, P = 0.00041
 Identities = 25/67 (37%), Positives = 34/67 (50%)

Query:    89 PCFPCSGSGAQ------RCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL-----TCTT 137
             PC  CSG+G +       C  C GTG+ TV + G  +  S C  C+G G++      CT 
Sbjct:   229 PCSTCSGTGMKPNTHKVSCSTCHGTGT-TVHIRGGFQMMSTCPTCNGEGTMKRPQDNCTK 287

Query:   138 CQGTGIQ 144
             C G G+Q
Sbjct:   288 CHGEGVQ 294

GO:0051082 "unfolded protein binding" evidence=IEA;IMP

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA;IMP

GO:0042026 "protein refolding" evidence=IMP;IDA

GO:0006458 "'de novo' protein folding" evidence=IMP

GO:0006515 "misfolded or incompletely synthesized protein catabolic process" evidence=IMP

GO:0000002 "mitochondrial genome maintenance" evidence=IMP

GO:0031314 "extrinsic to mitochondrial inner membrane" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0001671 "ATPase activator activity" evidence=IDA

GO:0006457 "protein folding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G4N8Z4 MGG_17224 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 87 (35.7 bits), Expect = 0.00052, P = 0.00052
 Identities = 21/59 (35%), Positives = 28/59 (47%)

Query:    85 ENTQPCFPCSGSGAQRCRFCMGTGS-VTVELGGDEREFSKCINCDGVGSLTCTTCQGTG 142
             + T+ C  CSG+G   C  C GTGS +  E G        C +C   G + C+ C G G
Sbjct:     4 KKTETCSSCSGTGQCTCLRCGGTGSDIFAECG-------ICPHCYARGQVPCSACGGKG 55

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
 Identities = 25/66 (37%), Positives = 32/66 (48%)

Query:    89 PCFPCSGSGA------QRCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSLT---CT 136
             PC  C GSGA      + C+ C G+G V+VE     G       C +C G G +    CT
Sbjct:   145 PCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCT 204

Query:   137 TCQGTG 142
             TC G+G
Sbjct:   205 TCHGSG 210

GO:0009408 "response to heat" evidence=ISS

TAIR|locus:2151556 AT5G61670 "AT5G61670" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
 Identities = 26/89 (29%), Positives = 42/89 (47%)

Query:    65 AVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVE-----LGGDER 119
             AVG+ I      +++N  ++E+ + C  C G+G   C  C  TG++ +      + G   
Sbjct:   207 AVGV-ISALMVVEVNNVKQQEHKR-CKYCLGTGYLACARCSSTGALVLTEPVSAIAGGNH 264

Query:   120 EFS-----KCINCDGVGSLTCTTCQGTGI 143
               S     +C NC G G + C TC  TG+
Sbjct:   265 SLSPPKTERCSNCSGAGKVMCPTCLCTGM 293

GO:0009536 "plastid" evidence=ISS

GO:0009661 "chromoplast organization" evidence=ISS

GO:0016120 "carotene biosynthetic process" evidence=ISS

TAIR|locus:504955942 AT2G24395 "AT2G24395" [Arabidopsis thaliana (taxid:3702)]

 Score = 82 (33.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query:    75 ETQIDNAAKRENTQP--CFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGS 132
             E Q+D + + ++     C  C+G G   C FC G     V+   + R + +C  C  VG 
Sbjct:    50 EPQLDQSQQGDDNAVILCEDCNGKGWLLCDFCKGQ-KTNVK-SENNRIYRRCPTCKAVGF 107

Query:   133 LTCTTCQ 139
             + C  C+
Sbjct:   108 VLCRKCK 114

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GSJ6	LQY1_ARATH	5, ., 3, ., 4, ., 1	0.7419	0.9490	0.9675	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_II0219 hypothetical protein (159 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	157
PLN03165	111	PLN03165, PLN03165, chaperone protein dnaJ-related	2e-74
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	9e-06
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	5e-05
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-04
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	2e-04
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	3e-04
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	4e-04
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	4e-04
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	9e-04
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	0.001
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	0.002

>gnl|CDD|178709 PLN03165, PLN03165, chaperone protein dnaJ-related; Provisional

 Score =  217 bits (555), Expect = 2e-74
 Identities = 95/111 (85%), Positives = 106/111 (95%)

Query: 47  AELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMG 106
            +LDQNT+VAISVG+VS+AVGIGIP+FYETQIDNAAKRENTQPCFPCSG+GAQ CRFC+G
Sbjct: 1   VDLDQNTIVAISVGVVSIAVGIGIPVFYETQIDNAAKRENTQPCFPCSGTGAQVCRFCVG 60

Query: 107 TGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 157
           +G+VTVELGG E+E SKCINCDG GSLTCTTCQG+GIQPRYLDRREFKDDD
Sbjct: 61  SGNVTVELGGGEKEVSKCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD 111

Length = 111

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 43.9 bits (104), Expect = 9e-06
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 12/66 (18%)

Query: 89  PCFPCSGSGAQ------RCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCT 136
            C  C GSGA+       C  C G+G V+VE     G       C +C+G G      C 
Sbjct: 145 TCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCP 204

Query: 137 TCQGTG 142
           TC G G
Sbjct: 205 TCHGKG 210

Length = 376

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 12/68 (17%)

Query: 89  PCFPCSGSGAQ------RCRFCMGTGSVTVELGGDEREFSK-CINCDGVGSLT---CTTC 138
           PC  C GSGA+       C  C G+G ++   G     FS+ C +C G GS+    C  C
Sbjct: 175 PCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGA--FGFSEPCTDCRGTGSIIEDPCEEC 232

Query: 139 QGTGIQPR 146
           +GTG+  R
Sbjct: 233 KGTGVTTR 240

Length = 392

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 16/66 (24%)

Query: 89  PCFPCSGSGAQR------CRFCMGTGSVTVELGGDEREFS---KCINCDGVGSLT---CT 136
           PC  CSG+GA+       C  C GTG V+   GG    FS    C +C G G +    C 
Sbjct: 168 PCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGG----FSLSEPCPDCKGRGLIADDPCL 223

Query: 137 TCQGTG 142
            C+G+G
Sbjct: 224 VCKGSG 229

Length = 389

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 18/81 (22%)

Query: 75  ETQIDNAAKRENTQPCFPCSGSGAQR------CRFCMGTGSVTVE----LGGDEREFSKC 124
           E ++  +  RE T  C  C+GSGA+       C  C G+G +TV+    LG   R+ + C
Sbjct: 138 EKEV--SYNREAT--CHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVT-C 192

Query: 125 INCDGVGSLT---CTTCQGTG 142
             C G G      C TC GTG
Sbjct: 193 DVCHGTGKEIKEPCQTCHGTG 213

Length = 380

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 12/68 (17%)

Query: 87  TQPCFPCSGSGAQ------RCRFCMGTGSVTVE---LGGDEREFSKCINCDGVGSLT--- 134
            + C  CSG+GA+      RC  C GTG VT       G     + C  C G G +    
Sbjct: 141 AERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESP 200

Query: 135 CTTCQGTG 142
           C  C GTG
Sbjct: 201 CPVCSGTG 208

Length = 377

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 26/117 (22%), Positives = 35/117 (29%), Gaps = 31/117 (26%)

Query: 32  SQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCF 91
           S R +RS           D    + ++        G+   I    +            C 
Sbjct: 105 SGRRRRSGPRRG-----EDLRYDLELT--FEEAVFGVEKEIEIPRKES----------CE 147

Query: 92  PCSGSGA------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQGTG 142
            C G+GA      + C  C GTG V  + G     F            TC TC G G
Sbjct: 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQ--------QQQTCPTCGGEG 196

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 10/67 (14%)

Query: 85  ENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLT---C 135
           +  + C  C GSG         C  C G+G VT +  G     + C  C G+G +    C
Sbjct: 142 QKLETCEECHGSGCEPGTSPTTCPQCGGSGQVT-QSQGFFSIRTTCPRCRGMGKVIVSPC 200

Query: 136 TTCQGTG 142
            TC G G
Sbjct: 201 KTCHGQG 207

Length = 366

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 15/75 (20%)

Query: 90  CFPCSGSGAQR------CRFCMGTGSVTVELGGDEREF---SKCINCDGVGSL---TCTT 137
           C  C GSGA+       C  C GTG V V+      +F   +KC  C+G G +    C  
Sbjct: 152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKN 211

Query: 138 CQGTGIQPRYLDRRE 152
           C+G G    YL+R++
Sbjct: 212 CKGKGK---YLERKK 223

Length = 372

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 12/80 (15%)

Query: 76  TQIDNAAKRENTQPCFPCSGSGAQ------RCRFCMGTGSVTVELG---GDEREFSKCIN 126
           T ++   K +   PC  C G+GA+       C  C G+GSVT       G  +  S C  
Sbjct: 143 TGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPT 202

Query: 127 CDGVGSLT---CTTCQGTGI 143
           C+G G +    C  C G GI
Sbjct: 203 CNGEGKIIKKKCKKCGGEGI 222

Length = 386

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 12/70 (17%)

Query: 85  ENTQPCFPCSGSGAQ------RCRFCMGTGSVTVELGGDEREFSK---CINCDGVGSLT- 134
           E  + C  C GSGA+       C  C GTG V                C  C G G +  
Sbjct: 153 ERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIIT 212

Query: 135 --CTTCQGTG 142
             C  C GTG
Sbjct: 213 DPCNKCGGTG 222

Length = 386

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
PLN03165	111	chaperone protein dnaJ-related; Provisional	99.93
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.7
PRK14282	369	chaperone protein DnaJ; Provisional	99.6
PRK14286	372	chaperone protein DnaJ; Provisional	99.59
PRK14279	392	chaperone protein DnaJ; Provisional	99.59
PRK14298	377	chaperone protein DnaJ; Provisional	99.58
PRK14280	376	chaperone protein DnaJ; Provisional	99.57
PRK14278	378	chaperone protein DnaJ; Provisional	99.57
PRK14276	380	chaperone protein DnaJ; Provisional	99.57
PRK14295	389	chaperone protein DnaJ; Provisional	99.57
PRK14285	365	chaperone protein DnaJ; Provisional	99.56
PRK14284	391	chaperone protein DnaJ; Provisional	99.56
PRK10767	371	chaperone protein DnaJ; Provisional	99.56
PRK14277	386	chaperone protein DnaJ; Provisional	99.56
PRK14300	372	chaperone protein DnaJ; Provisional	99.55
PRK14297	380	chaperone protein DnaJ; Provisional	99.55
PRK14288	369	chaperone protein DnaJ; Provisional	99.55
PRK14301	373	chaperone protein DnaJ; Provisional	99.55
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.55
PRK14296	372	chaperone protein DnaJ; Provisional	99.55
PRK14294	366	chaperone protein DnaJ; Provisional	99.54
PRK14281	397	chaperone protein DnaJ; Provisional	99.54
PRK14287	371	chaperone protein DnaJ; Provisional	99.54
PRK14289	386	chaperone protein DnaJ; Provisional	99.52
PRK14291	382	chaperone protein DnaJ; Provisional	99.51
PRK14290	365	chaperone protein DnaJ; Provisional	99.5
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.47
PRK14293	374	chaperone protein DnaJ; Provisional	99.47
PRK14283	378	chaperone protein DnaJ; Provisional	99.47
PRK14292	371	chaperone protein DnaJ; Provisional	99.46
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.27
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.25
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.93
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	98.29
PRK14298	377	chaperone protein DnaJ; Provisional	98.16
PRK14296	372	chaperone protein DnaJ; Provisional	98.14
PRK14278	378	chaperone protein DnaJ; Provisional	98.13
PRK14285	365	chaperone protein DnaJ; Provisional	98.11
PRK14279	392	chaperone protein DnaJ; Provisional	98.08
PRK14286	372	chaperone protein DnaJ; Provisional	98.06
PRK14300	372	chaperone protein DnaJ; Provisional	98.06
PRK14282	369	chaperone protein DnaJ; Provisional	98.02
PRK14280	376	chaperone protein DnaJ; Provisional	98.0
PRK14301	373	chaperone protein DnaJ; Provisional	97.99
PRK14284	391	chaperone protein DnaJ; Provisional	97.99
PRK14277	386	chaperone protein DnaJ; Provisional	97.98
PRK14295	389	chaperone protein DnaJ; Provisional	97.98
PRK10767	371	chaperone protein DnaJ; Provisional	97.98
PRK14294	366	chaperone protein DnaJ; Provisional	97.97
PRK14276	380	chaperone protein DnaJ; Provisional	97.97
PRK14291	382	chaperone protein DnaJ; Provisional	97.94
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.9
PRK14297	380	chaperone protein DnaJ; Provisional	97.89
PRK14287	371	chaperone protein DnaJ; Provisional	97.88
KOG2813	406	consensus Predicted molecular chaperone, contains	97.87
PRK14281	397	chaperone protein DnaJ; Provisional	97.85
PRK14289	386	chaperone protein DnaJ; Provisional	97.85
PRK14288	369	chaperone protein DnaJ; Provisional	97.84
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	97.84
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	97.78
PTZ00037	421	DnaJ_C chaperone protein; Provisional	97.74
PRK14293	374	chaperone protein DnaJ; Provisional	97.73
PRK14290	365	chaperone protein DnaJ; Provisional	97.71
KOG2813	406	consensus Predicted molecular chaperone, contains	97.7
PRK14283	378	chaperone protein DnaJ; Provisional	97.66
PRK14292	371	chaperone protein DnaJ; Provisional	97.32
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.25
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.81
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.48
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.15
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	96.03
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	95.74
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	95.29
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	88.75
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	84.98
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	84.0
TIGR00630	924	uvra excinuclease ABC, A subunit. This family is b	83.66
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	82.03

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=99.93  E-value=2.8e-26  Score=169.46  Aligned_cols=110  Identities=86%  Similarity=1.493  Sum_probs=104.9

Q ss_pred             cCCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCcCcCCCCCcccEEEEEcCCCeeeeeeCCCC
Q 031581           48 ELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINC  127 (157)
Q Consensus        48 dl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~~~C~~C~GsG~v~~~~~G~~~~~~~C~~C  127 (157)
                      ||++++.++|.+...++++|..++++++.++++++++.+...|..|+|+|..+|+.|+|+|.+.+.+.++++.+.+|+.|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~v~C~~C~GsG~~~C~~C~G~G~v~~~~~g~~q~~~~C~~C   81 (111)
T PLN03165          2 DLDQNTIVAISVGVVSIAVGIGIPVFYETQIDNAAKRENTQPCFPCSGTGAQVCRFCVGSGNVTVELGGGEKEVSKCINC   81 (111)
T ss_pred             ccchhhhhhhhhhhhhhhhccCCcEEEEEeeehhhhhccCCCCCCCCCCCCcCCCCCcCcCeEEEEeCCcEEEEEECCCC
Confidence            68999999999999999999999999999999999999999999999999999999999999987665567889999999


Q ss_pred             CCCceEeCCCCCCeeEEEeeeecceeccCC
Q 031581          128 DGVGSLTCTTCQGTGIQPRYLDRREFKDDD  157 (157)
Q Consensus       128 ~G~G~~~C~~C~G~G~~~~~l~~r~~~~~~  157 (157)
                      +|.|+..|+.|+|.|++++||+||+|+|||
T Consensus        82 ~G~Gk~~C~~C~G~G~~~~~~~~~~~~~~~  111 (111)
T PLN03165         82 DGAGSLTCTTCQGSGIQPRYLDRREFKDDD  111 (111)
T ss_pred             CCcceeeCCCCCCCEEEeeeecccccCCCC
Confidence            999999999999999999999999999998

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=6.1e-17  Score=140.61  Aligned_cols=88  Identities=26%  Similarity=0.536  Sum_probs=80.1

Q ss_pred             cCCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc-CCCeee
Q 031581           48 ELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL-GGDERE  120 (157)
Q Consensus        48 dl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~-~G~~~~  120 (157)
                      ..+.|+.+.|+|+|++++.|.+++|.+++.          ..|+.|+|+|+      .+|+.|+|+|.+...+ .|.|++
T Consensus       113 ~rG~Dl~~~l~isleEa~~G~~~~i~~~~~----------~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~  182 (371)
T COG0484         113 RRGADLRYNLEITLEEAVFGVKKEIRVTRS----------VTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSF  182 (371)
T ss_pred             ccCCceEEEEEeEhhhhccCceeeEeccee----------eECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEE
Confidence            355788999999999999999999999999          99999999987      8999999999987654 377899


Q ss_pred             eeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          121 FSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       121 ~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      +++|+.|+|+|++   +|.+|+|.|++.
T Consensus       183 ~~~C~~C~G~G~~i~~pC~~C~G~G~v~  210 (371)
T COG0484         183 QQTCPTCNGTGKIIKDPCGKCKGKGRVK  210 (371)
T ss_pred             EEECCCCccceeECCCCCCCCCCCCeEe
Confidence            9999999999999   999999999955

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.60  E-value=4.8e-15  Score=128.57  Aligned_cols=88  Identities=31%  Similarity=0.605  Sum_probs=80.6

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+.+.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.+...+   .|+++
T Consensus       124 ~g~di~~~l~~slee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  193 (369)
T PRK14282        124 RGEDIRYEIEVTLSDLINGAEIPVEYDRY----------ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFV  193 (369)
T ss_pred             CCCCeEEEEEEEHHHhcCCeEEEEEeeec----------ccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceE
Confidence            46799999999999999999999999998          99999999997      6899999999987654   48888


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|+|+|+.   .|++|+|.|++..
T Consensus       194 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  223 (369)
T PRK14282        194 SERTCERCGGTGKIPGEYCHECGGSGRIRR  223 (369)
T ss_pred             EEEECCCCCCcceeCCCCCCCCCCceeEEE
Confidence            89999999999998   9999999998764

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.59  E-value=4.1e-15  Score=129.22  Aligned_cols=87  Identities=30%  Similarity=0.599  Sum_probs=80.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+++.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.+...+ |+++.++
T Consensus       122 ~g~di~~~l~vtLee~~~G~~k~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~-G~~~~~~  190 (372)
T PRK14286        122 RGSDLRYNLEVSLEDAALGREYKIEIPRL----------ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQ-GFFSVAT  190 (372)
T ss_pred             CCCCeeEEEEEEHHHHhCCeeEEEEeecc----------ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEe-ceEEEEE
Confidence            46799999999999999999999999998          99999999997      7899999999987765 8888999


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|.|+|++   .|+.|+|.|++..
T Consensus       191 ~C~~C~G~G~~~~~~C~~C~G~g~~~~  217 (372)
T PRK14286        191 TCPTCRGKGTVISNPCKTCGGQGLQEK  217 (372)
T ss_pred             eCCCCCceeeEecccCCCCCCCcEEec
Confidence            99999999998   9999999999763

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.59  E-value=4.6e-15  Score=129.79  Aligned_cols=87  Identities=31%  Similarity=0.727  Sum_probs=80.4

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+++.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.++..+ |+++++.
T Consensus       145 ~g~di~~~l~ltLee~~~G~~~~v~~~~~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~  213 (392)
T PRK14279        145 RGNDLETETTLDFVEAAKGVTMPLRLTSP----------APCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ-GAFGFSE  213 (392)
T ss_pred             CCCCeEEEEEEEHHHHhCCeEEEEeeecc----------ccCCCCccccccCCCCCCCCCCCcceEEEEEEe-cceEEEE
Confidence            46799999999999999999999999998          99999999997      7899999999988765 7788899


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|+|+|++   .|.+|+|.|++..
T Consensus       214 ~C~~C~G~G~~i~~~C~~C~G~g~v~~  240 (392)
T PRK14279        214 PCTDCRGTGSIIEDPCEECKGTGVTTR  240 (392)
T ss_pred             ecCCCCceeEEeCCcCCCCCCCeEEEE
Confidence            99999999998   9999999999864

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.58  E-value=6.6e-15  Score=128.23  Aligned_cols=88  Identities=32%  Similarity=0.600  Sum_probs=79.9

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+++.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.++..+   +|+++
T Consensus       113 ~g~di~~~l~vslee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~  182 (377)
T PRK14298        113 RGSDLRYDLYITLEEAAFGVRKDIDVPRA----------ERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFV  182 (377)
T ss_pred             CCCCEEEEEEEEHHHhhCCeEEEEEEEee----------ccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEE
Confidence            46799999999999999999999999998          99999999997      7899999999988654   35678


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|+|+|+.   .|..|+|.|++..
T Consensus       183 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  212 (377)
T PRK14298        183 TTTTCSTCHGRGQVIESPCPVCSGTGKVRK  212 (377)
T ss_pred             EEEeCCCCCCCCcccCCCCCCCCCccEEEE
Confidence            89999999999987   9999999999763

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=8.2e-15  Score=127.45  Aligned_cols=87  Identities=29%  Similarity=0.589  Sum_probs=79.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+.+.|.|+|+++|.|.++++.+.+.          +.|+.|+|+|.      ..|+.|+|+|.+...+   .|+++
T Consensus       115 kg~di~~~l~vtLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~  184 (376)
T PRK14280        115 QGADLQYTMTLTFEEAVFGKEKEIEIPKE----------ETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVV  184 (376)
T ss_pred             cccCEEEEEEEEHHHHhCCceeEEEEeee----------ccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEE
Confidence            46799999999999999999999999998          99999999996      7899999999987654   37778


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      .+.+|+.|+|+|+.   .|+.|+|.|++.
T Consensus       185 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~  213 (376)
T PRK14280        185 NRQTCPHCNGTGQEIKEKCPTCHGKGKVR  213 (376)
T ss_pred             EEEEcCCCCCCCceecCCCCCCCCceEEE
Confidence            88999999999998   999999999875

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=8.6e-15  Score=127.48  Aligned_cols=88  Identities=26%  Similarity=0.553  Sum_probs=79.7

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+++.|.|+|++++.|.++.+.+.+.          ..|+.|+|+|.      .+|+.|+|+|.+...+   .|+++
T Consensus       111 ~g~d~~~~l~vtLee~~~G~~~~i~~~~~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~  180 (378)
T PRK14278        111 PGSDSLLRMRLDLEECATGVTKQVTVDTA----------VLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVM  180 (378)
T ss_pred             CCCCeEEEEEEEHHHhcCCeEEEEEEEee----------ccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEE
Confidence            46789999999999999999999999998          99999999997      6899999999987654   36778


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+++|+.|+|+|++   .|+.|+|.|++..
T Consensus       181 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  210 (378)
T PRK14278        181 TSRPCPTCRGVGEVIPDPCHECAGDGRVRA  210 (378)
T ss_pred             EEEECCCCCccceeeCCCCCCCCCceeEec
Confidence            88999999999998   9999999998753

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=9.1e-15  Score=127.35  Aligned_cols=87  Identities=30%  Similarity=0.628  Sum_probs=79.6

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .+.|+.+.|.++|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.+...+   .|+++
T Consensus       118 ~g~di~~~l~vtLee~~~G~~~~i~~~~~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  187 (380)
T PRK14276        118 QGDDLQYRVNLDFEEAIFGKEKEVSYNRE----------ATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMR  187 (380)
T ss_pred             CCCCEEEEEEEEHHHhcCCeEEEEEeecc----------ccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEE
Confidence            46799999999999999999999999998          99999999997      7899999999987654   37788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      .+.+|+.|.|+|++   .|..|+|.|++.
T Consensus       188 ~~~~C~~C~G~G~~~~~~C~~C~G~g~~~  216 (380)
T PRK14276        188 RQVTCDVCHGTGKEIKEPCQTCHGTGHEK  216 (380)
T ss_pred             EEEECCCCCCCCccccCCCCCCCCceEEE
Confidence            89999999999998   999999999875

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=8.4e-15  Score=128.03  Aligned_cols=87  Identities=29%  Similarity=0.650  Sum_probs=80.3

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+++.|.|+|+++|.|.++++.+.+.          +.|+.|+|+|.      .+|+.|.|+|.+...+ |+|+.+.
T Consensus       138 ~g~di~~~l~lsLee~~~G~~k~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~  206 (389)
T PRK14295        138 RGADVESEVTLSFTEAIDGATVPLRLTSQ----------APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS-GGFSLSE  206 (389)
T ss_pred             CCCCEEEEEEEEHHHHhCCceEEEEeecc----------ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe-cceEEEE
Confidence            46799999999999999999999999998          99999999997      7899999999998776 6788889


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|+|+|++   .|..|.|.|++..
T Consensus       207 ~C~~C~G~G~~~~~~C~~C~G~g~~~~  233 (389)
T PRK14295        207 PCPDCKGRGLIADDPCLVCKGSGRAKS  233 (389)
T ss_pred             ecCCCcceeEEeccCCCCCCCCceEee
Confidence            99999999998   9999999998764

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=8.8e-15  Score=126.90  Aligned_cols=86  Identities=28%  Similarity=0.555  Sum_probs=79.3

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+.+.|.|+|++++.|.++.+.+.+.          ..|..|+|+|.      ..|+.|+|+|++... .|+++.+.
T Consensus       118 ~g~di~~~l~vtlee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-~G~~~~~~  186 (365)
T PRK14285        118 KGQDLTYQIEISLEDAYLGYKNNINITRN----------MLCESCLGKKSEKGTSPSICNMCNGSGRVMQG-GGFFRVTT  186 (365)
T ss_pred             CCCCEEEEEEEEHHHhhCCeEEEEEeeec----------ccCCCCCCcccCCCCCCccCCCccCceeEEec-CceeEEee
Confidence            46799999999999999999999999998          99999999996      689999999998763 47888999


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEE
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      +|+.|.|+|++   .|.+|+|.|++.
T Consensus       187 ~C~~C~G~G~~~~~~C~~C~G~g~v~  212 (365)
T PRK14285        187 TCPKCYGNGKIISNPCKSCKGKGSLK  212 (365)
T ss_pred             ecCCCCCcccccCCCCCCCCCCCEEe
Confidence            99999999998   999999999876

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=9.1e-15  Score=127.77  Aligned_cols=86  Identities=30%  Similarity=0.598  Sum_probs=79.6

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      ...|+.+.|.|+|+++|.|.++.+.+.+.          ..|+.|+|+|+      .+|+.|+|+|.+...+ |+++.+.
T Consensus       130 ~g~d~~~~l~vslee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~-G~~~~~~  198 (391)
T PRK14284        130 QGASKKVHITLSFEEAAKGVEKELLVSGY----------KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR-GFFSMAS  198 (391)
T ss_pred             CCCCeEEEEEEEHHHHhCCeeEEEEEeee----------ccCCCCcccccCCCCCCeecCccCCeeEEEEEe-ceEEEEE
Confidence            45789999999999999999999999998          99999999997      7899999999988765 8888899


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEE
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      +|+.|+|+|+.   +|..|+|.|++.
T Consensus       199 ~C~~C~G~G~~~~~~C~~C~G~g~v~  224 (391)
T PRK14284        199 TCPECGGEGRVITDPCSVCRGQGRIK  224 (391)
T ss_pred             ECCCCCCCCcccCCcCCCCCCcceec
Confidence            99999999997   999999999875

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=1.2e-14  Score=126.02  Aligned_cols=87  Identities=28%  Similarity=0.559  Sum_probs=80.1

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+++.|.|+|+++|.|.++.+.+.+.          ..|+.|+|+|.      ..|+.|+|+|.+...+ |+++.+.
T Consensus       114 ~g~di~~~l~vsLee~~~G~~~~v~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~  182 (371)
T PRK10767        114 RGADLRYNMEITLEEAVRGVTKEIRIPTL----------VTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQ-GFFTVQQ  182 (371)
T ss_pred             CCCCeEEEEEeehHHhhCCeeEEEeeeec----------ccCCCCCCcccCCCCCCccCCCCCCeeEEEEee-ceEEEEE
Confidence            56799999999999999999999999998          99999999996      5899999999988765 8888889


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|.|+|+.   .|+.|+|.|++..
T Consensus       183 ~C~~C~G~G~~~~~~C~~C~G~g~v~~  209 (371)
T PRK10767        183 TCPTCHGRGKIIKDPCKKCHGQGRVEK  209 (371)
T ss_pred             eCCCCCCceeECCCCCCCCCCCceEee
Confidence            99999999998   9999999998753

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=1.5e-14  Score=126.27  Aligned_cols=88  Identities=31%  Similarity=0.561  Sum_probs=79.9

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+++.|.|+|+++|.|.++++.+.+.          +.|+.|+|+|.      .+|+.|.|+|++...+   .|+++
T Consensus       127 kg~di~~~l~vtLee~~~G~~~~v~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  196 (386)
T PRK14277        127 KGADIRYDLELTFEEAAFGTEKEIEVERF----------EKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIV  196 (386)
T ss_pred             CCCCEEEEEEEEHHHHhCCeEEEEEEEee----------ccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEE
Confidence            46899999999999999999999999998          99999999996      7899999999987654   47788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|.|+|+.   .|..|+|.|++..
T Consensus       197 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  226 (386)
T PRK14277        197 NIRTCDRCHGEGKIITDPCNKCGGTGRIRR  226 (386)
T ss_pred             EEEECCCCCcceeeccCCCCCCCCCcEEee
Confidence            88999999999998   9999999999753

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=1.5e-14  Score=125.76  Aligned_cols=88  Identities=25%  Similarity=0.555  Sum_probs=80.3

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+.+.|.++|++++.|.++.+.+.+.          +.|+.|+|+|.      .+|+.|+|+|.+...+ |+++.+.
T Consensus       117 ~g~di~~~l~~sLee~~~G~~k~i~~~r~----------~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~  185 (372)
T PRK14300        117 RGSDLKYNLTINLEEAFHGIEKNISFSSE----------VKCDTCHGSGSEKGETVTTCDACSGVGATRMQQ-GFFTIEQ  185 (372)
T ss_pred             CCCCeeEEEEEEHHHHhCCceEEEEeeec----------cccCCCCCcccCCCCCCccCCCccCeEEEEEee-ceEEEEE
Confidence            45799999999999999999999999998          99999999996      7899999999987654 8888889


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEee
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPRY  147 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~~  147 (157)
                      +|+.|+|+|++   +|.+|+|.|++...
T Consensus       186 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~  213 (372)
T PRK14300        186 ACHKCQGNGQIIKNPCKKCHGMGRYHKQ  213 (372)
T ss_pred             eCCCCCccceEeCCCCCCCCCceEEEee
Confidence            99999999998   99999999997643

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=1.8e-14  Score=125.44  Aligned_cols=88  Identities=26%  Similarity=0.583  Sum_probs=79.8

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+++.|.|+|+++|.|.++++.+.+.          ..|+.|+|+|.      .+|+.|+|+|.+...+   .|+++
T Consensus       120 kg~di~~~l~vsLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  189 (380)
T PRK14297        120 RGADIEYTINLTFEEAVFGVEKEISVTRN----------ENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFV  189 (380)
T ss_pred             CCCCEEEEEEEEHHHhcCCeEEEEEeeee----------ccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeE
Confidence            46799999999999999999999999998          99999999996      7899999999987654   37778


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|+|+|.+   .|..|+|.|+++.
T Consensus       190 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  219 (380)
T PRK14297        190 STTTCDKCGGSGKVIEDPCNKCHGKGKVRK  219 (380)
T ss_pred             EEEeCCCCCCCceEcCCCCCCCCCCeEEEe
Confidence            89999999999998   9999999998653

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=1.3e-14  Score=126.00  Aligned_cols=87  Identities=25%  Similarity=0.553  Sum_probs=79.7

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEcCCCeeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVELGGDEREFSK  123 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~~G~~~~~~~  123 (157)
                      .++|+.+.|.|+|+++|.|.++.+.+.+.          +.|+.|+|+|.     .+|+.|+|+|.+...+ |+++.+++
T Consensus       112 ~g~di~~~l~vslee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~~  180 (369)
T PRK14288        112 IAPDYLQTIELSFKEAVFGCKKTIKVQYQ----------SVCESCDGTGAKDKALETCKQCNGQGQVFMRQ-GFMSFAQT  180 (369)
T ss_pred             CCCCeeEeccccHHHHhCCeEEEEEEEee----------ccCCCCCCcccCCCCCcCCCCCCCCcEEEEEe-ceEEEEEe
Confidence            45799999999999999999999999998          99999999997     7899999999987665 77888899


Q ss_pred             CCCCCCCceE---eCCCCCCeeEEEe
Q 031581          124 CINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       124 C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      |+.|.|+|+.   .|+.|+|.|++..
T Consensus       181 C~~C~G~G~~~~~~C~~C~G~g~v~~  206 (369)
T PRK14288        181 CGACQGKGKIIKTPCQACKGKTYILK  206 (369)
T ss_pred             cCCCCCCceEccccCccCCCcceEEE
Confidence            9999999998   9999999998763

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=1e-14  Score=126.88  Aligned_cols=87  Identities=29%  Similarity=0.586  Sum_probs=79.9

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+.+.|.++|++++.|.++.+.+.+.          ..|+.|+|+|.      ..|+.|+|+|.+...+ |+++.+.
T Consensus       116 ~g~di~~~l~vtLee~~~G~~k~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~-G~~~~~~  184 (373)
T PRK14301        116 AGSDLRYNLTVSFRQAAKGDEVTLRIPKN----------VTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQ-GFFQIAV  184 (373)
T ss_pred             CCCCEEEEEeccHHHHhCCceEEEEeeec----------ccCCCCCCcccCCCCCCcccCCccCeeEEEEEe-eeEEEEE
Confidence            46799999999999999999999999998          99999999997      7899999999987654 7888899


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|+|+|++   .|+.|+|.|++..
T Consensus       185 ~C~~C~G~G~~~~~~C~~C~G~g~v~~  211 (373)
T PRK14301        185 PCPVCRGEGRVITHPCPKCKGSGIVQQ  211 (373)
T ss_pred             eCCCCCceeeecCCCCCCCCCCceecc
Confidence            99999999998   9999999998753

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.55  E-value=1.6e-14  Score=124.33  Aligned_cols=89  Identities=26%  Similarity=0.556  Sum_probs=80.4

Q ss_pred             cCCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCe
Q 031581           48 ELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDE  118 (157)
Q Consensus        48 dl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~  118 (157)
                      ...+|+++.|.++|+++|.|.++.+.+.+.          +.|+.|+|+|.      ..|+.|+|+|.+...+   .|++
T Consensus       114 ~~~~d~~~~l~vsLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~  183 (354)
T TIGR02349       114 RRGEDLRYDLELTFEEAVFGVEKEIEIPRK----------ESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFF  183 (354)
T ss_pred             CCCCCeEEEEEEEHHHHhCCeeEEEEeecC----------CcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCce
Confidence            346799999999999999999999999998          99999999996      7899999999988665   3678


Q ss_pred             eeeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          119 REFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       119 ~~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +.+.+|+.|.|+|+.   .|+.|+|.|++..
T Consensus       184 ~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  214 (354)
T TIGR02349       184 QQQQTCPTCGGEGKIIKEPCSTCKGKGRVKE  214 (354)
T ss_pred             EEEEecCCCCCcceecCCCCCCCCCCcEecc
Confidence            888999999999998   9999999998764

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=1.6e-14  Score=125.60  Aligned_cols=88  Identities=31%  Similarity=0.577  Sum_probs=78.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc-CCCe--e
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL-GGDE--R  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~-~G~~--~  119 (157)
                      .++|+.+.|.|+|++++.|.++.+.+.+.          ..|..|+|+|.      .+|+.|+|+|.+...+ .|++  +
T Consensus       121 ~g~di~~~l~ltlee~~~G~~~~i~~~~~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q  190 (372)
T PRK14296        121 KGQSVSLDIYLTFKELLFGVDKIIELDLL----------TNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQ  190 (372)
T ss_pred             CCCCeEEEeeccHHHhhCCeeEEEEEeee----------eccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEE
Confidence            46799999999999999999999999998          99999999997      6899999999988654 4543  6


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|.|+|++   .|++|+|.|++..
T Consensus       191 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  220 (372)
T PRK14296        191 QSAKCNVCNGAGKIIKNKCKNCKGKGKYLE  220 (372)
T ss_pred             EEecCCCcCCcceeecccccCCCCceEEEE
Confidence            67899999999998   8999999998753

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=1.9e-14  Score=124.74  Aligned_cols=87  Identities=28%  Similarity=0.553  Sum_probs=79.8

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .++|+++.|.|+|+++|.|.++.+.+++.          ..|+.|+|+|.      .+|+.|+|+|.+.... |+++.+.
T Consensus       116 ~g~d~~~~l~lslee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-G~~~~~~  184 (366)
T PRK14294        116 AGADLRYDLTLPFLEAAFGTEKEIRIQKL----------ETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQ-GFFSIRT  184 (366)
T ss_pred             CCCCceEEEEeeHHHhcCCeEEEEEeeec----------ccCCCCCCccccCCCCcccCCCcCCeEEEEEEe-eeEEEEe
Confidence            46789999999999999999999999998          99999999997      6899999999987654 8888899


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +|+.|+|+|+.   .|..|+|.|++..
T Consensus       185 ~C~~C~G~G~~~~~~C~~C~G~g~v~~  211 (366)
T PRK14294        185 TCPRCRGMGKVIVSPCKTCHGQGRVRV  211 (366)
T ss_pred             eCCCCCCcCeecCcCCCCCCCceEeec
Confidence            99999999998   9999999999753

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=2.1e-14  Score=125.72  Aligned_cols=88  Identities=27%  Similarity=0.637  Sum_probs=79.9

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEc---CCCeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVEL---GGDERE  120 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~---~G~~~~  120 (157)
                      .+.|+++.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.     ..|+.|+|+|.+...+   .|+++.
T Consensus       135 ~g~di~~~l~vtLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~  204 (397)
T PRK14281        135 PGTDLKIRLKLTLEEIAKGVEKTLKIKKQ----------VPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN  204 (397)
T ss_pred             CCCCEEEEEEeEHHHHhCCeEEEEEEEee----------ecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE
Confidence            46799999999999999999999999998          99999999997     6899999999987654   377778


Q ss_pred             eeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          121 FSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       121 ~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +.+|+.|.|+|++   .|+.|+|.|++..
T Consensus       205 ~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  233 (397)
T PRK14281        205 ITACPTCGGEGRVVKDRCPACYGEGIKQG  233 (397)
T ss_pred             EEecCCCcceeeeeCCCCCCCCCCccEec
Confidence            8999999999998   9999999999764

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=3e-14  Score=123.78  Aligned_cols=87  Identities=28%  Similarity=0.592  Sum_probs=79.6

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .++|+.+.|.++|+++|.|.++.+.+.+.          ..|+.|+|+|.      .+|+.|+|+|.+...+   .|+++
T Consensus       110 ~g~d~~~~l~vslee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  179 (371)
T PRK14287        110 QGADLQYTMTLEFKEAVFGKETEIEIPRE----------ETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVV  179 (371)
T ss_pred             CCCCEEEEEEEEHHHhcCCeEEEEEEeee----------ccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEE
Confidence            46899999999999999999999999999          99999999996      7899999999987654   47788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      .+.+|+.|.|+|++   .|..|+|.|++.
T Consensus       180 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~  208 (371)
T PRK14287        180 NRRVCHHCEGTGKIIKQKCATCGGKGKVR  208 (371)
T ss_pred             EEEeCCCCCCCCccccccCCCCCCeeEEe
Confidence            88999999999998   999999999876

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.52  E-value=4.1e-14  Score=123.31  Aligned_cols=88  Identities=31%  Similarity=0.630  Sum_probs=80.4

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .+.|+++.|.|+|++++.|.++.+.+.+.          +.|+.|+|+|.      ..|+.|+|+|.+...+   .|+++
T Consensus       126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~  195 (386)
T PRK14289        126 RGSDLRVKVKLNLKEISTGVEKKFKVKKY----------VPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQ  195 (386)
T ss_pred             CCCCeEEEEEEEHHHhhCCeEEEEEEEee----------cccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEE
Confidence            46799999999999999999999999998          99999999997      7899999999998765   37788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|.|+|+.   .|..|+|.|++..
T Consensus       196 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  225 (386)
T PRK14289        196 TQSTCPTCNGEGKIIKKKCKKCGGEGIVYG  225 (386)
T ss_pred             EEEecCCCCccccccCcCCCCCCCCcEEee
Confidence            89999999999998   9999999999764

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=5e-14  Score=122.79  Aligned_cols=87  Identities=26%  Similarity=0.609  Sum_probs=79.3

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      ..+|+.+.|.|+|++++.|.++.+.+.+.          +.|..|+|+|.      ..|+.|+|+|.+... .|+++.+.
T Consensus       128 ~g~di~~~l~vsLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-~g~~~~~~  196 (382)
T PRK14291        128 KGEDIYQTVEISLEEAYTGTTVSLEVPRY----------VPCEACGGTGYDPGSGEKVCPTCGGSGEIYQR-GGFFRISQ  196 (382)
T ss_pred             CCCCEEEEEEEEHHHhhCCEEEEEEEeee----------ccCCCCccccCCCCCCCccCCCCCCceEEEEe-cceEEEEe
Confidence            46899999999999999999999999998          99999999996      789999999998776 36778899


Q ss_pred             eCCCCCCCceE--eCCCCCCeeEEEe
Q 031581          123 KCINCDGVGSL--TCTTCQGTGIQPR  146 (157)
Q Consensus       123 ~C~~C~G~G~~--~C~~C~G~G~~~~  146 (157)
                      +|+.|.|+|.+  .|.+|+|.|++..
T Consensus       197 ~C~~C~G~G~~~~~C~~C~G~g~v~~  222 (382)
T PRK14291        197 TCPTCGGEGVLREPCSKCNGRGLVIK  222 (382)
T ss_pred             cCCCCCCceEEccCCCCCCCCceEEe
Confidence            99999999977  9999999998763

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=1.1e-13  Score=120.05  Aligned_cols=87  Identities=30%  Similarity=0.580  Sum_probs=78.2

Q ss_pred             CCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEc-CCCe--eee
Q 031581           50 DQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVEL-GGDE--REF  121 (157)
Q Consensus        50 ~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~-~G~~--~~~  121 (157)
                      ++|+++.|.++|++++.|.++.+.+.+.          +.|+.|+|+|.     ..|+.|.|+|++...+ .|++  +.+
T Consensus       122 ~~di~~~l~lsLee~~~G~~~~i~~~r~----------~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~  191 (365)
T PRK14290        122 DLDIYTNLDISLEDAYYGTEKRIKYRRN----------AMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTV  191 (365)
T ss_pred             CCCEEEEEEecHHHhcCCEEEEEEeeec----------ccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEE
Confidence            5799999999999999999999999998          99999999997     7899999999987665 4665  456


Q ss_pred             eeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          122 SKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       122 ~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+|+.|.|.|+.   .|.+|+|.|++..
T Consensus       192 ~~C~~C~G~G~~~~~~C~~C~G~g~v~~  219 (365)
T PRK14290        192 TTCRTCGGRGRIPEEKCPRCNGTGTVVV  219 (365)
T ss_pred             EeCCCCCCceeEccCCCCCCCCceeEEE
Confidence            899999999998   9999999999764

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.47  E-value=1.2e-13  Score=121.98  Aligned_cols=88  Identities=25%  Similarity=0.560  Sum_probs=77.3

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEc-CCCe--ee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVEL-GGDE--RE  120 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~-~G~~--~~  120 (157)
                      .++|+.+.|.++|+++|.|.++.+.+.+.          ..|+.|+|+|.     .+|+.|+|+|.++... .|.+  +.
T Consensus       122 rg~di~~~l~vtLee~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~  191 (421)
T PTZ00037        122 RGEDIVSHLKVTLEQIYNGAMRKLAINKD----------VICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQT  191 (421)
T ss_pred             CCCCEEEEeeeeHHHHhCCCceEEEeecc----------ccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEE
Confidence            46799999999999999999999999998          99999999997     7899999999876543 3433  67


Q ss_pred             eeeCCCCCCCceE-----eCCCCCCeeEEEe
Q 031581          121 FSKCINCDGVGSL-----TCTTCQGTGIQPR  146 (157)
Q Consensus       121 ~~~C~~C~G~G~~-----~C~~C~G~G~~~~  146 (157)
                      +.+|+.|+|+|++     .|.+|+|.|++..
T Consensus       192 ~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~  222 (421)
T PTZ00037        192 QSTCNSCNGQGKIIPESKKCKNCSGKGVKKT  222 (421)
T ss_pred             EEeCCCCCCcceeccccccCCcCCCcceeee
Confidence            8899999999997     6999999999764

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=1.1e-13  Score=120.37  Aligned_cols=88  Identities=26%  Similarity=0.554  Sum_probs=79.2

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .+.|+.+.|.++|++++.|.++.+.+.+.          +.|..|+|+|.      ..|+.|+|+|.+...+   .|+++
T Consensus       115 kg~di~~~l~vsLee~~~G~~k~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~  184 (374)
T PRK14293        115 RGDDLRYDLKLDFREAIFGGEKEIRIPHL----------ETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFT  184 (374)
T ss_pred             CCCCeEEEEEeeHHHHhCCceEEEEeecc----------ccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEE
Confidence            35789999999999999999999999998          99999999997      6799999999987654   37788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|.|.|+.   .|.+|+|.|++..
T Consensus       185 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  214 (374)
T PRK14293        185 QVSECPTCNGTGQVIEDPCDACGGQGVKQV  214 (374)
T ss_pred             EEeeCCCCCcceeEeccCCCCCCCCccccc
Confidence            88999999999998   9999999998754

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=1.3e-13  Score=120.01  Aligned_cols=88  Identities=27%  Similarity=0.585  Sum_probs=79.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEc---CCCee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVEL---GGDER  119 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~  119 (157)
                      .+.|+.+.|.++|++++.|.++.+.+.+.          +.|+.|+|+|.      ..|+.|.|+|.+...+   .|+++
T Consensus       118 kg~di~~~l~vsLed~~~G~~~~i~~~r~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~  187 (378)
T PRK14283        118 RGADIYTEVEITLEEAASGVEKDIKVRHT----------KKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMM  187 (378)
T ss_pred             CCCCeEEEeeeeHHHHhCCcceEEEeeee----------ccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEE
Confidence            35789999999999999999999999998          99999999997      7899999999997654   37788


Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      .+.+|+.|.|+|+.   .|..|+|.|++..
T Consensus       188 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  217 (378)
T PRK14283        188 NVTTCPDCQGEGKIVEKPCSNCHGKGVVRE  217 (378)
T ss_pred             EEEECCCCCccceecCCCCCCCCCceeecc
Confidence            88999999999998   9999999998764

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=2e-13  Score=118.35  Aligned_cols=88  Identities=24%  Similarity=0.517  Sum_probs=79.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-------CcCCCCCcccEEEEEc---CCCe
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-------QRCRFCMGTGSVTVEL---GGDE  118 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-------~~C~~C~GsG~v~~~~---~G~~  118 (157)
                      .+.|+++.|.++|++++.|.++++.+.+.          ..|+.|+|+|.       ..|+.|.|+|++...+   +|++
T Consensus       111 ~g~d~~~~l~~sLee~~~G~~~~v~~~r~----------~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~  180 (371)
T PRK14292        111 RGDDLETEARITLEQARAGEEVEVEVDRL----------TECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVV  180 (371)
T ss_pred             CCCCeEEEEeccHHHHcCCeEEEEEEEee----------ecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceE
Confidence            46789999999999999999999999998          99999999996       6799999999987654   4778


Q ss_pred             eeeeeCCCCCCCceE---eCCCCCCeeEEEe
Q 031581          119 REFSKCINCDGVGSL---TCTTCQGTGIQPR  146 (157)
Q Consensus       119 ~~~~~C~~C~G~G~~---~C~~C~G~G~~~~  146 (157)
                      +.+.+|+.|.|.|+.   .|.+|.|.|++..
T Consensus       181 ~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  211 (371)
T PRK14292        181 ETQQPCPTCRGEGQIITDPCTVCRGRGRTLK  211 (371)
T ss_pred             EEeeecCCCcccceecCCCCCCCCCceEEee
Confidence            888999999999998   9999999998753

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.27  E-value=5.4e-12  Score=108.68  Aligned_cols=86  Identities=29%  Similarity=0.580  Sum_probs=78.8

Q ss_pred             CCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEc---CCCe-ee
Q 031581           50 DQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVEL---GGDE-RE  120 (157)
Q Consensus        50 ~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~---~G~~-~~  120 (157)
                      +.|+++.|+++|+++|+|.++++.+.++          .+|+.|+|+|.     ..|..|.|+|..+..+   .|++ ++
T Consensus       100 g~~~~~~~~~~Le~~y~G~s~kl~l~~~----------~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~  169 (337)
T KOG0712|consen  100 GKDVVHQLKVTLEELYMGKSKKLFLSRN----------FICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSP  169 (337)
T ss_pred             CCCceEEEEEEHHHhhcCCccceecccC----------ccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccc
Confidence            7899999999999999999999999999          99999999998     6799999999987665   3566 67


Q ss_pred             eeeCCCCCCCceE-----eCCCCCCeeEEE
Q 031581          121 FSKCINCDGVGSL-----TCTTCQGTGIQP  145 (157)
Q Consensus       121 ~~~C~~C~G~G~~-----~C~~C~G~G~~~  145 (157)
                      +..|..|+|+|..     .|+.|.|++++.
T Consensus       170 q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~  199 (337)
T KOG0712|consen  170 QLVCDSCNGSGETISLKDRCKTCSGAKVVR  199 (337)
T ss_pred             eeEeccCCCccccccccccCcccccchhhh
Confidence            8999999999997     999999999876

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.25  E-value=1.2e-11  Score=83.15  Aligned_cols=53  Identities=42%  Similarity=0.978  Sum_probs=44.0

Q ss_pred             CCCCCCCCc------CcCCCCCcccEEEEEc---CCCeeeeeeCCCCCCCceE----eCCCCCCee
Q 031581           90 CFPCSGSGA------QRCRFCMGTGSVTVEL---GGDEREFSKCINCDGVGSL----TCTTCQGTG  142 (157)
Q Consensus        90 C~~C~GsG~------~~C~~C~GsG~v~~~~---~G~~~~~~~C~~C~G~G~~----~C~~C~G~G  142 (157)
                      |+.|+|+|+      .+|+.|+|+|++...+   ++.++++.+|+.|+|+|++    +|++|+|.|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            889999998      8999999999998765   3567899999999999998    799999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.93  E-value=1e-09  Score=95.69  Aligned_cols=85  Identities=26%  Similarity=0.482  Sum_probs=77.2

Q ss_pred             CCCccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-------------CcCCC
Q 031581           40 APYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-------------QRCRF  103 (157)
Q Consensus        40 ~~~p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-------------~~C~~  103 (157)
                      ...|++.+|+..++.+.|+..+.+..+.+..+....+..   +|++++....+|++|+|+|.             ++|+.
T Consensus       109 ~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~  188 (371)
T COG0484         109 PNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPT  188 (371)
T ss_pred             CCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCC
Confidence            334888999999999999999999999999999888876   88888889999999999996             79999


Q ss_pred             CCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          104 CMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       104 C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      |+|+|.++         ..+|+.|+|.|.+
T Consensus       189 C~G~G~~i---------~~pC~~C~G~G~v  209 (371)
T COG0484         189 CNGTGKII---------KDPCGKCKGKGRV  209 (371)
T ss_pred             CccceeEC---------CCCCCCCCCCCeE
Confidence            99999998         4799999999986

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=98.29  E-value=5.5e-07  Score=60.45  Aligned_cols=45  Identities=38%  Similarity=0.815  Sum_probs=33.7

Q ss_pred             cccccCCCceeCCCCCCCCc---------------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCc
Q 031581           79 DNAAKRENTQPCFPCSGSGA---------------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVG  131 (157)
Q Consensus        79 ~~~~~~~~~~~C~~C~GsG~---------------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G  131 (157)
                      +|+.+......|+.|+|+|.               ++|+.|+|+|+++ .       ..+|+.|+|.|
T Consensus         7 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~-------~~~C~~C~G~g   66 (66)
T PF00684_consen    7 TGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E-------KDPCKTCKGSG   66 (66)
T ss_dssp             TSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T-------SSB-SSSTTSS
T ss_pred             cccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C-------CCCCCCCCCcC
Confidence            45666777899999999997               7999999999997 2       48999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.16  E-value=1.9e-06  Score=75.30  Aligned_cols=82  Identities=24%  Similarity=0.502  Sum_probs=69.0

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.               ++|+.|
T Consensus       111 ~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  190 (377)
T PRK14298        111 PRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTC  190 (377)
T ss_pred             CCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCC
Confidence            456668999999999999999999999888777653   56666666789999999995               589999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|+.|.|.|.+
T Consensus       191 ~G~G~~~---------~~~C~~C~G~g~v  210 (377)
T PRK14298        191 HGRGQVI---------ESPCPVCSGTGKV  210 (377)
T ss_pred             CCCCccc---------CCCCCCCCCccEE
Confidence            9999986         3679999999976

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.14  E-value=2.2e-06  Score=74.82  Aligned_cols=82  Identities=22%  Similarity=0.483  Sum_probs=68.5

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+.+.|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.               ++|+.|
T Consensus       119 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C  198 (372)
T PRK14296        119 STKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVC  198 (372)
T ss_pred             cCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCc
Confidence            455668999999999999999999998888777754   56555666789999999996               389999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|+.|+|.|.+
T Consensus       199 ~G~G~~~---------~~~C~~C~G~g~v  218 (372)
T PRK14296        199 NGAGKII---------KNKCKNCKGKGKY  218 (372)
T ss_pred             CCcceee---------cccccCCCCceEE
Confidence            9999987         3679999999875

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.13  E-value=2.3e-06  Score=74.85  Aligned_cols=82  Identities=18%  Similarity=0.333  Sum_probs=68.8

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      ++...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.               ++|+.|
T Consensus       109 ~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  188 (378)
T PRK14278        109 VRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTC  188 (378)
T ss_pred             CCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCC
Confidence            445668999999999999999999998888777653   66666666789999999995               579999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+|+++         ..+|+.|.|.|.+
T Consensus       189 ~G~G~~~---------~~~C~~C~G~g~v  208 (378)
T PRK14278        189 RGVGEVI---------PDPCHECAGDGRV  208 (378)
T ss_pred             Cccceee---------CCCCCCCCCceeE
Confidence            9999987         3679999999975

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.11  E-value=2.1e-06  Score=74.74  Aligned_cols=82  Identities=23%  Similarity=0.438  Sum_probs=68.7

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      ++.+.|+..++.++|+..+.+..+-+.......+..   +|+..+.....|+.|+|+|.           .+|+.|.|+|
T Consensus       116 ~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G  195 (365)
T PRK14285        116 HEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNG  195 (365)
T ss_pred             CCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcc
Confidence            445669999999999999999999998888777653   55556666789999999995           5899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       196 ~~~---------~~~C~~C~G~g~v  211 (365)
T PRK14285        196 KII---------SNPCKSCKGKGSL  211 (365)
T ss_pred             ccc---------CCCCCCCCCCCEE
Confidence            987         3689999999975

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=1.9e-06  Score=75.67  Aligned_cols=82  Identities=24%  Similarity=0.469  Sum_probs=68.8

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |+...|+..++.+.|+-.+.+..+-+.......+..   +|+.......+|+.|+|+|.           ++|+.|+|+|
T Consensus       143 ~~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  222 (392)
T PRK14279        143 PRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTG  222 (392)
T ss_pred             CCCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCcee
Confidence            455668999999999999999999888887776653   66666666789999999996           6899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       223 ~~i---------~~~C~~C~G~g~v  238 (392)
T PRK14279        223 SII---------EDPCEECKGTGVT  238 (392)
T ss_pred             EEe---------CCcCCCCCCCeEE
Confidence            987         3679999999876

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=2.8e-06  Score=74.12  Aligned_cols=82  Identities=28%  Similarity=0.492  Sum_probs=68.3

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      ++...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.           ++|+.|.|+|
T Consensus       120 ~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G  199 (372)
T PRK14286        120 PQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKG  199 (372)
T ss_pred             CCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCcee
Confidence            445568999999999999999999998888776653   55555566689999999995           5899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       200 ~~~---------~~~C~~C~G~g~~  215 (372)
T PRK14286        200 TVI---------SNPCKTCGGQGLQ  215 (372)
T ss_pred             eEe---------cccCCCCCCCcEE
Confidence            987         3679999999986

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=3.9e-06  Score=73.21  Aligned_cols=82  Identities=24%  Similarity=0.518  Sum_probs=68.6

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |+...++..++.+.|+-.+.+..+-+.......+..   +|.........|+.|+|+|.           .+|+.|.|+|
T Consensus       115 ~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  194 (372)
T PRK14300        115 KVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNG  194 (372)
T ss_pred             CCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccc
Confidence            345668999999999999999999888888777653   55555666789999999996           5799999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       195 ~~~---------~~~C~~C~G~g~v  210 (372)
T PRK14300        195 QII---------KNPCKKCHGMGRY  210 (372)
T ss_pred             eEe---------CCCCCCCCCceEE
Confidence            987         3689999999986

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.02  E-value=4.1e-06  Score=72.92  Aligned_cols=82  Identities=18%  Similarity=0.383  Sum_probs=67.4

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      ++...|+..++.+.|+..+.+..+-++......+..   +|+........|+.|+|+|.               ++|+.|
T Consensus       122 ~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  201 (369)
T PRK14282        122 ARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERC  201 (369)
T ss_pred             CCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCC
Confidence            445568989999999999999999998888776654   55555566789999999996               579999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|..|.|.|.+
T Consensus       202 ~G~G~~~---------~~~C~~C~G~g~v  221 (369)
T PRK14282        202 GGTGKIP---------GEYCHECGGSGRI  221 (369)
T ss_pred             CCcceeC---------CCCCCCCCCceeE
Confidence            9999986         4679999999964

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.00  E-value=3.3e-06  Score=73.76  Aligned_cols=82  Identities=28%  Similarity=0.513  Sum_probs=68.0

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.               ++|+.|
T Consensus       113 ~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  192 (376)
T PRK14280        113 PRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHC  192 (376)
T ss_pred             cccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCC
Confidence            445668889999999999999999998888777653   55555566789999999985               479999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+|+++         ..+|+.|.|.|.+
T Consensus       193 ~G~G~~~---------~~~C~~C~G~g~v  212 (376)
T PRK14280        193 NGTGQEI---------KEKCPTCHGKGKV  212 (376)
T ss_pred             CCCCcee---------cCCCCCCCCceEE
Confidence            9999986         3679999999975

>PRK14301 chaperone protein DnaJ; Provisional

Probab=97.99  E-value=3e-06  Score=74.00  Aligned_cols=82  Identities=28%  Similarity=0.498  Sum_probs=67.8

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.           .+|+.|+|+|
T Consensus       114 ~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G  193 (373)
T PRK14301        114 PQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEG  193 (373)
T ss_pred             CCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCcee
Confidence            445668888999999999999999888887776653   55555566789999999996           6899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|+.|+|.|.+
T Consensus       194 ~~~---------~~~C~~C~G~g~v  209 (373)
T PRK14301        194 RVI---------THPCPKCKGSGIV  209 (373)
T ss_pred             eec---------CCCCCCCCCCcee
Confidence            987         3679999999975

>PRK14284 chaperone protein DnaJ; Provisional

Probab=97.99  E-value=4e-06  Score=73.56  Aligned_cols=82  Identities=21%  Similarity=0.386  Sum_probs=68.6

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.           ++|+.|+|+|
T Consensus       128 ~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G  207 (391)
T PRK14284        128 ARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEG  207 (391)
T ss_pred             cCCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCC
Confidence            345568889999999999999999988887777653   56666677799999999997           6899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|+.|.|.|.+
T Consensus       208 ~~~---------~~~C~~C~G~g~v  223 (391)
T PRK14284        208 RVI---------TDPCSVCRGQGRI  223 (391)
T ss_pred             ccc---------CCcCCCCCCccee
Confidence            986         3679999999875

>PRK14277 chaperone protein DnaJ; Provisional

Probab=97.98  E-value=6.5e-06  Score=72.15  Aligned_cols=82  Identities=21%  Similarity=0.492  Sum_probs=67.5

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.               ++|+.|
T Consensus       125 ~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  204 (386)
T PRK14277        125 PQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRC  204 (386)
T ss_pred             CCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCC
Confidence            445568888999999999999999988888776653   55555566789999999986               479999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|..|.|.|.+
T Consensus       205 ~G~G~~~---------~~~C~~C~G~g~v  224 (386)
T PRK14277        205 HGEGKII---------TDPCNKCGGTGRI  224 (386)
T ss_pred             Ccceeec---------cCCCCCCCCCcEE
Confidence            9999987         3679999999986

>PRK14295 chaperone protein DnaJ; Provisional

Probab=97.98  E-value=4.2e-06  Score=73.45  Aligned_cols=82  Identities=21%  Similarity=0.472  Sum_probs=68.2

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      ++...|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.           ++|+.|.|+|
T Consensus       136 ~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  215 (389)
T PRK14295        136 PRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRG  215 (389)
T ss_pred             CCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCccee
Confidence            445668989999999999999999888887777654   55555566789999999996           6899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       216 ~~~---------~~~C~~C~G~g~~  231 (389)
T PRK14295        216 LIA---------DDPCLVCKGSGRA  231 (389)
T ss_pred             EEe---------ccCCCCCCCCceE
Confidence            987         3689999999875

>PRK10767 chaperone protein DnaJ; Provisional

Probab=97.98  E-value=5.2e-06  Score=72.21  Aligned_cols=82  Identities=26%  Similarity=0.531  Sum_probs=68.0

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |+.+.|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.           ++|+.|.|+|
T Consensus       112 ~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  191 (371)
T PRK10767        112 ARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRG  191 (371)
T ss_pred             CCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCce
Confidence            456678999999999999999999998888877653   55555556689999999996           4699999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       192 ~~~---------~~~C~~C~G~g~v  207 (371)
T PRK10767        192 KII---------KDPCKKCHGQGRV  207 (371)
T ss_pred             eEC---------CCCCCCCCCCceE
Confidence            986         3679999999975

>PRK14294 chaperone protein DnaJ; Provisional

Probab=97.97  E-value=5.8e-06  Score=71.92  Aligned_cols=82  Identities=23%  Similarity=0.431  Sum_probs=67.4

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      ++...|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.           ++|+.|.|+|
T Consensus       114 ~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G  193 (366)
T PRK14294        114 VRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMG  193 (366)
T ss_pred             CCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcC
Confidence            445668999999999999999999888888776643   45555556789999999996           5899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       194 ~~~---------~~~C~~C~G~g~v  209 (366)
T PRK14294        194 KVI---------VSPCKTCHGQGRV  209 (366)
T ss_pred             eec---------CcCCCCCCCceEe
Confidence            986         4679999999975

>PRK14276 chaperone protein DnaJ; Provisional

Probab=97.97  E-value=3.7e-06  Score=73.55  Aligned_cols=82  Identities=21%  Similarity=0.387  Sum_probs=67.5

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+.+.|+..++.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.               ++|+.|
T Consensus       116 ~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  195 (380)
T PRK14276        116 PRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVC  195 (380)
T ss_pred             CCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCC
Confidence            445668888999999999999999888888777653   55555566789999999985               579999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|..|.|.|.+
T Consensus       196 ~G~G~~~---------~~~C~~C~G~g~~  215 (380)
T PRK14276        196 HGTGKEI---------KEPCQTCHGTGHE  215 (380)
T ss_pred             CCCCccc---------cCCCCCCCCceEE
Confidence            9999987         3679999999975

>PRK14291 chaperone protein DnaJ; Provisional

Probab=97.94  E-value=1e-05  Score=70.75  Aligned_cols=81  Identities=22%  Similarity=0.532  Sum_probs=66.9

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      |..+.|+...+.+.|+..+.+..+-+.......+..   +|+........|+.|+|+|.           ++|+.|.|+|
T Consensus       126 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  205 (382)
T PRK14291        126 PVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG  205 (382)
T ss_pred             ccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCce
Confidence            445668999999999999999999998888777643   55556666789999999996           6899999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .+          ..+|..|+|.|.+
T Consensus       206 ~~----------~~~C~~C~G~g~v  220 (382)
T PRK14291        206 VL----------REPCSKCNGRGLV  220 (382)
T ss_pred             EE----------ccCCCCCCCCceE
Confidence            53          3679999999975

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.90  E-value=8.1e-06  Score=75.00  Aligned_cols=58  Identities=33%  Similarity=0.631  Sum_probs=46.7

Q ss_pred             eeCCCCCCCCc-----CcCCCCCcccEEEEEcC--------C----CeeeeeeCCCCCCCceE----eCCCCCCeeEEE
Q 031581           88 QPCFPCSGSGA-----QRCRFCMGTGSVTVELG--------G----DEREFSKCINCDGVGSL----TCTTCQGTGIQP  145 (157)
Q Consensus        88 ~~C~~C~GsG~-----~~C~~C~GsG~v~~~~~--------G----~~~~~~~C~~C~G~G~~----~C~~C~G~G~~~  145 (157)
                      ..|+.|+|+|.     ..|+.|+|+|.+.....        +    .+....+|+.|+|+|.+    .|+.|.|+|.+.
T Consensus         3 ~~C~~C~g~G~i~v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~   81 (715)
T COG1107           3 KKCPECGGKGKIVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVL   81 (715)
T ss_pred             ccccccCCCceEeeeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEE
Confidence            67999999998     77999999999843221        1    12345799999999998    999999999865

>PRK14297 chaperone protein DnaJ; Provisional

Probab=97.89  E-value=8.2e-06  Score=71.32  Aligned_cols=82  Identities=22%  Similarity=0.468  Sum_probs=67.2

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+.+.|+..++.+.|+..+.+..+-+.......+..   +|..+......|+.|+|+|.               .+|+.|
T Consensus       118 ~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  197 (380)
T PRK14297        118 PQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKC  197 (380)
T ss_pred             CCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCC
Confidence            445668999999999999999999988888776653   55555556789999999985               579999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+|.++         ..+|..|.|.|.+
T Consensus       198 ~G~G~~~---------~~~C~~C~G~g~v  217 (380)
T PRK14297        198 GGSGKVI---------EDPCNKCHGKGKV  217 (380)
T ss_pred             CCCceEc---------CCCCCCCCCCeEE
Confidence            9999986         3689999999964

>PRK14287 chaperone protein DnaJ; Provisional

Probab=97.88  E-value=8e-06  Score=71.28  Aligned_cols=82  Identities=27%  Similarity=0.528  Sum_probs=67.9

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.               .+|+.|
T Consensus       108 ~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  187 (371)
T PRK14287        108 PRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHC  187 (371)
T ss_pred             CCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCC
Confidence            345668999999999999999999998888777654   55555566789999999995               579999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++         ..+|..|.|.|.+
T Consensus       188 ~G~G~~~---------~~~C~~C~G~g~v  207 (371)
T PRK14287        188 EGTGKII---------KQKCATCGGKGKV  207 (371)
T ss_pred             CCCCccc---------cccCCCCCCeeEE
Confidence            9999986         3679999999876

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.87  E-value=9.7e-06  Score=69.94  Aligned_cols=60  Identities=40%  Similarity=0.837  Sum_probs=36.7

Q ss_pred             eeCCCCCCCCcCcCCCCCcccEEEEEc---------CC----Ce-----------eeeeeCCCCCCCceEeCCCCCCeeE
Q 031581           88 QPCFPCSGSGAQRCRFCMGTGSVTVEL---------GG----DE-----------REFSKCINCDGVGSLTCTTCQGTGI  143 (157)
Q Consensus        88 ~~C~~C~GsG~~~C~~C~GsG~v~~~~---------~G----~~-----------~~~~~C~~C~G~G~~~C~~C~G~G~  143 (157)
                      ..|-.|.|.|+.+|+.|+|.|......         -|    ..           ....+|++|+|+|..+|.+|.|+|-
T Consensus       188 ~~ch~c~gRG~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~~~C~tC~grG~k~C~TC~gtgs  267 (406)
T KOG2813|consen  188 TFCHACLGRGAMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGIKECHTCKGRGKKPCTTCSGTGS  267 (406)
T ss_pred             hhhhcccCCCceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCcccCCcccCCCCcccccccCccc
Confidence            557777788887788888777321100         01    00           1245677777777777777777776


Q ss_pred             EEee
Q 031581          144 QPRY  147 (157)
Q Consensus       144 ~~~~  147 (157)
                      .-.|
T Consensus       268 ll~~  271 (406)
T KOG2813|consen  268 LLNY  271 (406)
T ss_pred             eeee
Confidence            5443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=97.85  E-value=1.2e-05  Score=70.74  Aligned_cols=80  Identities=23%  Similarity=0.368  Sum_probs=65.8

Q ss_pred             cccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCCC
Q 031581           44 CIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFCM  105 (157)
Q Consensus        44 ~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C~  105 (157)
                      +...|+..++.+.|+..+.+..+-+.......+..   +|+... ....|+.|+|+|.               ++|+.|.
T Consensus       134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  212 (397)
T PRK14281        134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCG  212 (397)
T ss_pred             CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCc
Confidence            34568999999999999999999988888777653   454444 4678999999995               5799999


Q ss_pred             cccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          106 GTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       106 GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      |+|+++         ..+|..|.|.|.+
T Consensus       213 G~G~~~---------~~~C~~C~G~g~v  231 (397)
T PRK14281        213 GEGRVV---------KDRCPACYGEGIK  231 (397)
T ss_pred             ceeeee---------CCCCCCCCCCccE
Confidence            999987         3679999999886

>PRK14289 chaperone protein DnaJ; Provisional

Probab=97.85  E-value=1.1e-05  Score=70.63  Aligned_cols=82  Identities=21%  Similarity=0.433  Sum_probs=67.8

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      +....|+..++.+.|+..+.+..+-+.......+..   +|.........|+.|+|+|.               ..|+.|
T Consensus       124 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  203 (386)
T PRK14289        124 VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTC  203 (386)
T ss_pred             CCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCC
Confidence            345668999999999999999999998888777643   55555566789999999987               379999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|.++         ..+|..|.|.|.+
T Consensus       204 ~G~G~~~---------~~~C~~C~G~g~v  223 (386)
T PRK14289        204 NGEGKII---------KKKCKKCGGEGIV  223 (386)
T ss_pred             Ccccccc---------CcCCCCCCCCcEE
Confidence            9999987         3679999999975

>PRK14288 chaperone protein DnaJ; Provisional

Probab=97.84  E-value=1.1e-05  Score=70.29  Aligned_cols=81  Identities=20%  Similarity=0.427  Sum_probs=63.6

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCccc
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTG  108 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG  108 (157)
                      ++...|+..++.+.|+..+.+..+-+.......+..   +|+... ....|+.|+|+|.           ++|+.|.|+|
T Consensus       110 ~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G  188 (369)
T PRK14288        110 SSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKG  188 (369)
T ss_pred             CCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCc
Confidence            345568888889999988888888887776665532   454443 4588999999996           5799999999


Q ss_pred             EEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          109 SVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       109 ~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +++         ..+|..|.|.|.+
T Consensus       189 ~~~---------~~~C~~C~G~g~v  204 (369)
T PRK14288        189 KII---------KTPCQACKGKTYI  204 (369)
T ss_pred             eEc---------cccCccCCCcceE
Confidence            986         3679999999875

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=97.84  E-value=1.1e-05  Score=69.59  Aligned_cols=82  Identities=24%  Similarity=0.509  Sum_probs=67.1

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      ++...|+..++.+.|+-.+.+..+-+..+....+..   +|.........|+.|+|+|.               ++|+.|
T Consensus       113 ~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  192 (354)
T TIGR02349       113 PRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTC  192 (354)
T ss_pred             CCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCC
Confidence            445668889999999999999999888887776643   55555555789999999985               589999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+++.         .+|..|.|.|.+
T Consensus       193 ~G~G~~~~---------~~C~~C~G~g~v  212 (354)
T TIGR02349       193 GGEGKIIK---------EPCSTCKGKGRV  212 (354)
T ss_pred             CCcceecC---------CCCCCCCCCcEe
Confidence            99999873         579999999976

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=7.7e-06  Score=69.41  Aligned_cols=86  Identities=27%  Similarity=0.539  Sum_probs=71.4

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFS  122 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~  122 (157)
                      .+.+..+.+.+.|+++..|..+.+.+...          ..|.+|.|.|.      ..|..|.|.|.+.......+... 
T Consensus       136 ~~~~~~~d~~~~f~~A~~g~~~~~~~~~~----------~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-  204 (288)
T KOG0715|consen  136 PDKDQYYDLSLDFKEAVRGSKKRISFNVL----------SDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILY-  204 (288)
T ss_pred             cCcccccccccCHHHHhhccccceEEEee----------cccccccCcCcccccccccchhhhCcccccccccCCccee-
Confidence            34567778999999999999888888887          89999999998      89999999997654333444334 


Q ss_pred             eCCCCCCCceE---eCCCCCCeeEEE
Q 031581          123 KCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       123 ~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      +|..|.|.|.+   .|..|.|.|.+.
T Consensus       205 ~~~~c~~~~~~~~~~c~~~~g~~~v~  230 (288)
T KOG0715|consen  205 TCSYCLGRGLVLRDNCQACSGAGQVR  230 (288)
T ss_pred             ecccccccceeccchHHHhhcchhhh
Confidence            99999999998   699999999654

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=97.74  E-value=1.7e-05  Score=70.49  Aligned_cols=83  Identities=22%  Similarity=0.346  Sum_probs=66.2

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      ++.+.|+..++.+.|+..+.+..+-+.......+..   +|... .....|+.|+|+|.               ++|+.|
T Consensus       120 ~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~-~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C  198 (421)
T PTZ00037        120 KKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPK-DAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSC  198 (421)
T ss_pred             ccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCC-CCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCC
Confidence            345668888999999999999999888887777653   45433 34578999999994               489999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+|+++..       ..+|..|+|.|.+
T Consensus       199 ~G~G~~i~~-------~~~C~~C~G~g~v  220 (421)
T PTZ00037        199 NGQGKIIPE-------SKKCKNCSGKGVK  220 (421)
T ss_pred             CCcceeccc-------cccCCcCCCccee
Confidence            999998742       4789999999976

>PRK14293 chaperone protein DnaJ; Provisional

Probab=97.73  E-value=2.5e-05  Score=68.19  Aligned_cols=82  Identities=24%  Similarity=0.461  Sum_probs=66.2

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...++..++.+.|+-.+.+..+-++......+..   +|.........|+.|+|+|.               .+|..|
T Consensus       113 ~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  192 (374)
T PRK14293        113 PQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTC  192 (374)
T ss_pred             ccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCC
Confidence            344557888899999999999999888887776653   45555556689999999996               479999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|.|+++         ..+|..|.|.|.+
T Consensus       193 ~G~G~~~---------~~~C~~C~G~g~v  212 (374)
T PRK14293        193 NGTGQVI---------EDPCDACGGQGVK  212 (374)
T ss_pred             CcceeEe---------ccCCCCCCCCccc
Confidence            9999986         3679999999975

>PRK14290 chaperone protein DnaJ; Provisional

Probab=97.71  E-value=2.9e-05  Score=67.53  Aligned_cols=78  Identities=22%  Similarity=0.426  Sum_probs=63.7

Q ss_pred             cccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCCCcc
Q 031581           46 RAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFCMGT  107 (157)
Q Consensus        46 ~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C~Gs  107 (157)
                      ..|+..++.+.|+..+.+..+-+.......+..   +|.... ....|+.|+|+|.               ++|+.|.|.
T Consensus       122 ~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~  200 (365)
T PRK14290        122 DLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGR  200 (365)
T ss_pred             CCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCc
Confidence            458889999999999999998888887777653   444333 4578999999994               589999999


Q ss_pred             cEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          108 GSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       108 G~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      |+++         ..+|+.|+|.|.+
T Consensus       201 G~~~---------~~~C~~C~G~g~v  217 (365)
T PRK14290        201 GRIP---------EEKCPRCNGTGTV  217 (365)
T ss_pred             eeEc---------cCCCCCCCCceeE
Confidence            9986         4789999999985

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.70  E-value=1.1e-05  Score=69.53  Aligned_cols=13  Identities=31%  Similarity=0.938  Sum_probs=6.5

Q ss_pred             CcCCCCCcccEEE
Q 031581           99 QRCRFCMGTGSVT  111 (157)
Q Consensus        99 ~~C~~C~GsG~v~  111 (157)
                      ..|..|.|+|.+.
T Consensus       188 ~~ch~c~gRG~~v  200 (406)
T KOG2813|consen  188 TFCHACLGRGAMV  200 (406)
T ss_pred             hhhhcccCCCcee
Confidence            4455555555443

>PRK14283 chaperone protein DnaJ; Provisional

Probab=97.66  E-value=2.7e-05  Score=67.98  Aligned_cols=82  Identities=22%  Similarity=0.480  Sum_probs=66.8

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |+...|+..++.+.|+-.+.+..+-+.......+..   +|..+......|+.|+|+|.               .+|+.|
T Consensus       116 ~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  195 (378)
T PRK14283        116 PQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDC  195 (378)
T ss_pred             ccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCC
Confidence            445568989999999999999998888877776643   55555566789999999987               469999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .|+|+.+         ..+|..|.|.|.+
T Consensus       196 ~G~G~~~---------~~~C~~C~G~g~v  215 (378)
T PRK14283        196 QGEGKIV---------EKPCSNCHGKGVV  215 (378)
T ss_pred             Cccceec---------CCCCCCCCCceee
Confidence            9999986         3679999999975

>PRK14292 chaperone protein DnaJ; Provisional

Probab=97.32  E-value=0.00015  Score=63.04  Aligned_cols=82  Identities=22%  Similarity=0.504  Sum_probs=64.1

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccC-CCceeCCCCCCCCc---------------CcCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKR-ENTQPCFPCSGSGA---------------QRCRF  103 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~-~~~~~C~~C~GsG~---------------~~C~~  103 (157)
                      |+...|+...+.+.|+..+.+..+-+.......+..   +|.... .....|..|+|+|.               .+|..
T Consensus       109 ~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  188 (371)
T PRK14292        109 PARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPT  188 (371)
T ss_pred             ccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCC
Confidence            345668888899999999999888888877776643   333322 23588999999996               37999


Q ss_pred             CCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          104 CMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       104 C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      |.|.|+.+         ..+|..|.|.|.+
T Consensus       189 C~G~G~~~---------~~~C~~C~G~g~v  209 (371)
T PRK14292        189 CRGEGQII---------TDPCTVCRGRGRT  209 (371)
T ss_pred             Ccccceec---------CCCCCCCCCceEE
Confidence            99999986         4789999999875

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.25  E-value=0.00032  Score=64.79  Aligned_cols=45  Identities=40%  Similarity=1.002  Sum_probs=35.6

Q ss_pred             eeCCCCCCCCc------------------------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE-eCCCCCC
Q 031581           88 QPCFPCSGSGA------------------------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL-TCTTCQG  140 (157)
Q Consensus        88 ~~C~~C~GsG~------------------------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~-~C~~C~G  140 (157)
                      ..|+-|+|+|-                        ..|+.|.|.|.+..        ..+|+.|.|+|++ .|..|.-
T Consensus        19 e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v--------~~~c~~c~G~gkv~~c~~cG~   88 (715)
T COG1107          19 EECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV--------YDTCPECGGTGKVLTCDICGD   88 (715)
T ss_pred             eecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE--------EeecccCCCceeEEeeccccc
Confidence            67888888884                        68889999988875        4788999998887 6666653

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.81  E-value=0.0011  Score=49.26  Aligned_cols=34  Identities=44%  Similarity=0.969  Sum_probs=28.2

Q ss_pred             eeCCCCCCCCc------------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581           88 QPCFPCSGSGA------------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus        88 ~~C~~C~GsG~------------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      ..|+.|+|+|.            +.|+.|.|+|++            .|..|+|.|..
T Consensus        53 ~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~------------~C~~C~G~G~~   98 (111)
T PLN03165         53 QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL------------TCTTCQGSGIQ   98 (111)
T ss_pred             cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee------------eCCCCCCCEEE
Confidence            48999999886            589999999963            39999999875

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.48  E-value=0.0027  Score=51.04  Aligned_cols=13  Identities=38%  Similarity=0.876  Sum_probs=6.5

Q ss_pred             CcCCCCCcccEEE
Q 031581           99 QRCRFCMGTGSVT  111 (157)
Q Consensus        99 ~~C~~C~GsG~v~  111 (157)
                      ..|+.|+|+|.++
T Consensus       100 ~~C~~C~G~G~~i  112 (186)
T TIGR02642       100 CKCPRCRGTGLIQ  112 (186)
T ss_pred             CcCCCCCCeeEEe
Confidence            4455555555544

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.15  E-value=0.0037  Score=50.26  Aligned_cols=24  Identities=38%  Similarity=0.912  Sum_probs=12.9

Q ss_pred             eeCCCCCCCCc-----CcCCCCCcccEEE
Q 031581           88 QPCFPCSGSGA-----QRCRFCMGTGSVT  111 (157)
Q Consensus        88 ~~C~~C~GsG~-----~~C~~C~GsG~v~  111 (157)
                      ..|+.|+|+|.     ..|+.|+|+|++.
T Consensus       100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~  128 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQRECDTCAGTGRFR  128 (186)
T ss_pred             CcCCCCCCeeEEecCCCCCCCCCCccEEe
Confidence            45555555554     1355555555554

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=96.03  E-value=0.0089  Score=50.69  Aligned_cols=54  Identities=28%  Similarity=0.687  Sum_probs=44.6

Q ss_pred             CCceeCCCCCCCCcCcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceEeCCCCC
Q 031581           85 ENTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTCTTCQ  139 (157)
Q Consensus        85 ~~~~~C~~C~GsG~~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~~C~~C~  139 (157)
                      ...-.|..|.|.+...|..|+|+=++... ........+|..|+--|.++|+.|.
T Consensus       227 ~~~~~C~~CGg~rFlpC~~C~GS~kv~~~-~~~~~~~~rC~~CNENGLvrCp~Cs  280 (281)
T KOG2824|consen  227 EGGGVCESCGGARFLPCSNCHGSCKVHEE-EEDDGGVLRCLECNENGLVRCPVCS  280 (281)
T ss_pred             CCCCcCCCcCCcceEecCCCCCceeeeee-ccCCCcEEECcccCCCCceeCCccC
Confidence            33478999999999999999999998753 1233456899999999999999995

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=95.74  E-value=0.013  Score=45.19  Aligned_cols=50  Identities=26%  Similarity=0.562  Sum_probs=33.5

Q ss_pred             CceeCCCCCCCCcCcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceEeC
Q 031581           86 NTQPCFPCSGSGAQRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLTC  135 (157)
Q Consensus        86 ~~~~C~~C~GsG~~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~~C  135 (157)
                      ....|..|.|.+...|..|+|+=++............+|+.|+--|.++|
T Consensus        98 ~~~~C~~Cgg~rfv~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~~c  147 (147)
T cd03031          98 GGGVCEGCGGARFVPCSECNGSCKVFAENATAAGGFLRCPECNENGLVRC  147 (147)
T ss_pred             CCCCCCCCCCcCeEECCCCCCcceEEeccCcccccEEECCCCCccccccC
Confidence            44679999999999999999999987532101122345555555554444

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=95.29  E-value=0.011  Score=51.42  Aligned_cols=81  Identities=16%  Similarity=0.358  Sum_probs=61.9

Q ss_pred             cccCCCCeEEEEEEecceeeeeeEEeEeeeeee-cccccC-CCceeCCCCCCCCc----------------CcCCCCCcc
Q 031581           46 RAELDQNTVVAISVGLVSVAVGIGIPIFYETQI-DNAAKR-ENTQPCFPCSGSGA----------------QRCRFCMGT  107 (157)
Q Consensus        46 ~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~-~~~~~~-~~~~~C~~C~GsG~----------------~~C~~C~Gs  107 (157)
                      ..|.-.++.+.|+-.+.+.......+....+.. ++.... .....|..|.|+|.                .+|..|.|+
T Consensus       100 g~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~  179 (337)
T KOG0712|consen  100 GKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGS  179 (337)
T ss_pred             CCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCc
Confidence            457888999999999999888877666555543 332222 33357999999997                789999999


Q ss_pred             cEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          108 GSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       108 G~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      |..+.       ....|+.|.|++.+
T Consensus       180 G~~~~-------~kd~C~~C~G~~~v  198 (337)
T KOG0712|consen  180 GETIS-------LKDRCKTCSGAKVV  198 (337)
T ss_pred             ccccc-------ccccCcccccchhh
Confidence            99753       25899999999886

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=88.75  E-value=0.61  Score=35.97  Aligned_cols=34  Identities=29%  Similarity=0.772  Sum_probs=21.1

Q ss_pred             CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE------------eCCCCCCeeEE
Q 031581           99 QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL------------TCTTCQGTGIQ  144 (157)
Q Consensus        99 ~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~------------~C~~C~G~G~~  144 (157)
                      ..|..|.|.+.+            +|..|+|.-++            +|+.|+-.|++
T Consensus       100 ~~C~~Cgg~rfv------------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~  145 (147)
T cd03031         100 GVCEGCGGARFV------------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV  145 (147)
T ss_pred             CCCCCCCCcCeE------------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence            457777776664            46667665332            67777766654

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=84.98  E-value=0.68  Score=38.65  Aligned_cols=26  Identities=35%  Similarity=0.760  Sum_probs=18.6

Q ss_pred             eeCCCC---CCCCcCcCCCCCcccEEEEE
Q 031581           88 QPCFPC---SGSGAQRCRFCMGTGSVTVE  113 (157)
Q Consensus        88 ~~C~~C---~GsG~~~C~~C~GsG~v~~~  113 (157)
                      ..|++|   .|.+..+||.|+|+|++-+.
T Consensus        25 ~~~~py~e~~g~~~vtCPTCqGtGrIP~e   53 (238)
T PF07092_consen   25 ISSFPYVEFTGRDSVTCPTCQGTGRIPRE   53 (238)
T ss_pred             cccCccccccCCCCCcCCCCcCCccCCcc
Confidence            444444   56666899999999998654

The function of this family is unknown.

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=84.00  E-value=1.4  Score=37.56  Aligned_cols=22  Identities=32%  Similarity=0.866  Sum_probs=10.5

Q ss_pred             eeCCCCCCCceEeCCCCCCeeE
Q 031581          122 SKCINCDGVGSLTCTTCQGTGI  143 (157)
Q Consensus       122 ~~C~~C~G~G~~~C~~C~G~G~  143 (157)
                      ..|..|.|.++++|..|+|+-.
T Consensus       230 ~~C~~CGg~rFlpC~~C~GS~k  251 (281)
T KOG2824|consen  230 GVCESCGGARFLPCSNCHGSCK  251 (281)
T ss_pred             CcCCCcCCcceEecCCCCCcee
Confidence            3444444444445555544443

>TIGR00630 uvra excinuclease ABC, A subunit

Probab=83.66  E-value=0.89  Score=44.53  Aligned_cols=37  Identities=27%  Similarity=0.673  Sum_probs=19.7

Q ss_pred             cCCCCCcccEEEEEcCCCe-eeeeeCCCCCCCceEeCCCCCCeeEEEeee
Q 031581          100 RCRFCMGTGSVTVELGGDE-REFSKCINCDGVGSLTCTTCQGTGIQPRYL  148 (157)
Q Consensus       100 ~C~~C~GsG~v~~~~~G~~-~~~~~C~~C~G~G~~~C~~C~G~G~~~~~l  148 (157)
                      .|+.|.|.|.+.... +++ -...           +|+.|+|..+.+..|
T Consensus       738 ~C~~C~G~G~~~~~~-~f~~~~~~-----------~C~~C~G~R~~~e~l  775 (924)
T TIGR00630       738 RCEACQGDGVIKIEM-HFLPDVYV-----------PCEVCKGKRYNRETL  775 (924)
T ss_pred             CCCCCccceEEEEEc-cCCCCccc-----------CCCCcCCceeChHHH
Confidence            477777777766532 221 1123           566666666555443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=82.03  E-value=0.51  Score=39.41  Aligned_cols=29  Identities=41%  Similarity=0.639  Sum_probs=23.5

Q ss_pred             eeeeCCCCCCCceEeCCCCCCeeEEEeee
Q 031581          120 EFSKCINCDGVGSLTCTTCQGTGIQPRYL  148 (157)
Q Consensus       120 ~~~~C~~C~G~G~~~C~~C~G~G~~~~~l  148 (157)
                      ...++-.-.|++.++|++|+|+|.+|+..
T Consensus        26 ~~~py~e~~g~~~vtCPTCqGtGrIP~eq   54 (238)
T PF07092_consen   26 SSFPYVEFTGRDSVTCPTCQGTGRIPREQ   54 (238)
T ss_pred             ccCccccccCCCCCcCCCCcCCccCCccc
Confidence            45677778888888999999999988755

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.73
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.61
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.44
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	98.5
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	98.22
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	98.14
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.5
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.99
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.96
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.83
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	96.4
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	96.17
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	90.91
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	83.58

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=1.1e-18  Score=125.52  Aligned_cols=84  Identities=27%  Similarity=0.617  Sum_probs=76.7

Q ss_pred             CCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeeeeC
Q 031581           51 QNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFSKC  124 (157)
Q Consensus        51 ~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~~C  124 (157)
                      .|+.+.|.|+|+|+|+|.+++|.+++.          ..|+.|+|+|+      .+|+.|+|+|++...+ |+|+.+.+|
T Consensus         2 ~~~~~~l~vslee~~~G~~~~i~~~~~----------~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~-G~~~~~~~C   70 (104)
T 2ctt_A            2 SSGSSGMELTFNQAAKGVNKEFTVNIM----------DTCERCNGKGNEPGTKVQHCHYCGGSGMETINT-GPFVMRSTC   70 (104)
T ss_dssp             CCCCCCCCCCCSSCCSSSCTTCCSSCC----------EECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE-TTEEEEEEC
T ss_pred             CceEEEEEEEHHHHcCCCEEEEEeeee----------eECCCCcCCccCCCCCCccCCCCCCCEEEEEEe-CCEEEEEEC
Confidence            366788899999999999999999998          99999999996      6899999999987665 788889999


Q ss_pred             CCCCCCceE---eCCCCCCeeEEE
Q 031581          125 INCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       125 ~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      +.|.|+|++   +|+.|+|.|++.
T Consensus        71 ~~C~G~G~~i~~~C~~C~G~G~v~   94 (104)
T 2ctt_A           71 RRCGGRGSIIISPCVVCRGAGQAK   94 (104)
T ss_dssp             SSSSSSSEECSSCCSSSSSCSEEC
T ss_pred             CcCCCcceECCCcCCCCCCeeEEE
Confidence            999999998   899999999875

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.61  E-value=1.3e-15  Score=124.50  Aligned_cols=87  Identities=26%  Similarity=0.534  Sum_probs=77.2

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc-----CcCCCCCcccEEEEEc-CCCe--ee
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA-----QRCRFCMGTGSVTVEL-GGDE--RE  120 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~-----~~C~~C~GsG~v~~~~-~G~~--~~  120 (157)
                      .++|+++.|.|+|+|+|.|.++.+.+.+.          ..|+.|+|+|+     .+|+.|+|+|.+...+ .|.|  +.
T Consensus        10 ~g~d~~~~l~vslee~~~G~~k~i~~~r~----------~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~   79 (248)
T 1nlt_A           10 RGKDIKHEISASLEELYKGRTAKLALNKQ----------ILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRF   79 (248)
T ss_dssp             BCCCEEEEEEECTTHHHHCEEEEEEEEEE----------EECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEE
T ss_pred             CCCCEEEEEEecHHHhcCCceEEEEeeEE----------EeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEE
Confidence            46799999999999999999999999998          99999999996     8999999999987544 3543  57


Q ss_pred             eeeCCCCCCCceE-----eCCCCCCeeEEE
Q 031581          121 FSKCINCDGVGSL-----TCTTCQGTGIQP  145 (157)
Q Consensus       121 ~~~C~~C~G~G~~-----~C~~C~G~G~~~  145 (157)
                      +.+|+.|+|+|++     +|++|+|.|++.
T Consensus        80 ~~~C~~C~G~G~~i~~~~~C~~C~G~g~~~  109 (248)
T 1nlt_A           80 QTECDVCHGTGDIIDPKDRCKSCNGKKVEN  109 (248)
T ss_dssp             ECSCTTCSSSSSCCCTTSBCSSSTTSCEEE
T ss_pred             EEcCCCCCCcCEEeccCCCCcccCCCceEe
Confidence            8999999999965     899999999875

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.44  E-value=4.6e-14  Score=96.04  Aligned_cols=69  Identities=38%  Similarity=0.737  Sum_probs=59.4

Q ss_pred             eeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE---eCCC
Q 031581           67 GIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL---TCTT  137 (157)
Q Consensus        67 G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~---~C~~  137 (157)
                      |.+++|.|++.          ..|+.|+|+|+      .+|+.|+|+|+++..+ |+|+.+.+|+.|+|.|.+   +|+.
T Consensus         1 G~~~~i~~~~~----------~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~~C~~C~G~G~~~~~~C~~   69 (79)
T 1exk_A            1 GVTKEIRIPTL----------EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ-GFFAVQQTCPHCQGRGTLIKDPCNK   69 (79)
T ss_dssp             CTTTSCCCCCE----------EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE-TTEEEEEECTTTTTSSEECSSBCGG
T ss_pred             CcEEEEEcccc----------eECCCCcccccCCCccCCCCCCCcCeEEEEEEc-CCCEEeeECcCCCCccEECCCcCCC
Confidence            34456667776          99999999996      5899999999987655 888888999999999999   9999


Q ss_pred             CCCeeEEEe
Q 031581          138 CQGTGIQPR  146 (157)
Q Consensus       138 C~G~G~~~~  146 (157)
                      |+|.|++..
T Consensus        70 C~G~G~~~~   78 (79)
T 1exk_A           70 CHGHGRVER   78 (79)
T ss_dssp             GTTSSEEEC
T ss_pred             CCCeEEEee
Confidence            999998753

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.50  E-value=2.2e-08  Score=71.40  Aligned_cols=76  Identities=25%  Similarity=0.495  Sum_probs=58.5

Q ss_pred             CCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc-----------CcCCCCCcccEEEEEc
Q 031581           49 LDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTGSVTVEL  114 (157)
Q Consensus        49 l~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG~v~~~~  114 (157)
                      ...++.+.|+..+.+..+.+..+....+..   +|+.++.....|+.|+|+|.           ++|+.|+|+|+++   
T Consensus         4 ~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i---   80 (104)
T 2ctt_A            4 GSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII---   80 (104)
T ss_dssp             CCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC---
T ss_pred             eEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC---
Confidence            344555666777777777777666666654   56666666789999999995           5899999999987   


Q ss_pred             CCCeeeeeeCCCCCCCceE
Q 031581          115 GGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       115 ~G~~~~~~~C~~C~G~G~~  133 (157)
                            ..+|+.|+|.|.+
T Consensus        81 ------~~~C~~C~G~G~v   93 (104)
T 2ctt_A           81 ------ISPCVVCRGAGQA   93 (104)
T ss_dssp             ------SSCCSSSSSCSEE
T ss_pred             ------CCcCCCCCCeeEE
Confidence                  4789999999986

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=98.22  E-value=2.8e-07  Score=75.04  Aligned_cols=83  Identities=17%  Similarity=0.389  Sum_probs=69.5

Q ss_pred             ccccccCCCCeEEEEEEecceeeeeeEEeEeeeeee---cccccCCCceeCCCCCCCCc---------------CcCCCC
Q 031581           43 PCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQI---DNAAKRENTQPCFPCSGSGA---------------QRCRFC  104 (157)
Q Consensus        43 p~~~adl~~d~~~~l~vsl~~~~~G~~~~v~~~~~~---~~~~~~~~~~~C~~C~GsG~---------------~~C~~C  104 (157)
                      |++..|+..++.+.|+..+.+..+-+.......+..   +|+.++. ...|+.|+|+|.               .+|+.|
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C   86 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC   86 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence            456678999999999999999999999888887654   6766666 499999999994               589999


Q ss_pred             CcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581          105 MGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus       105 ~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+|+++..       ..+|+.|+|.|.+
T Consensus        87 ~G~G~~i~~-------~~~C~~C~G~g~~  108 (248)
T 1nlt_A           87 HGTGDIIDP-------KDRCKSCNGKKVE  108 (248)
T ss_dssp             SSSSSCCCT-------TSBCSSSTTSCEE
T ss_pred             CCcCEEecc-------CCCCcccCCCceE
Confidence            999998632       4789999999975

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=98.14  E-value=1.2e-06  Score=58.93  Aligned_cols=41  Identities=37%  Similarity=0.868  Sum_probs=33.1

Q ss_pred             CCCceeCCCCCCCCc-----------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581           84 RENTQPCFPCSGSGA-----------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus        84 ~~~~~~C~~C~GsG~-----------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      .....+|+.|+|+|.           .+|+.|+|+|.++         ..+|+.|+|.|.+
T Consensus        25 ~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~---------~~~C~~C~G~G~~   76 (79)
T 1exk_A           25 GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI---------KDPCNKCHGHGRV   76 (79)
T ss_dssp             SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC---------SSBCGGGTTSSEE
T ss_pred             CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC---------CCcCCCCCCeEEE
Confidence            344478999999996           2799999999875         4689999999876

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.50  E-value=5.6e-05  Score=48.10  Aligned_cols=26  Identities=35%  Similarity=0.825  Sum_probs=21.2

Q ss_pred             eeeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          120 EFSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       120 ~~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      .+.+|+.|+|+|.+   +|+.|+|.|++.
T Consensus         8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~   36 (53)
T 3lcz_A            8 LETTCPNCNGSGREEPEPCPKCLGKGVIL   36 (53)
T ss_dssp             HEEECTTTTTSCEETTEECTTTTTSSEEE
T ss_pred             eeccCcCCcccccCCCCcCCCCCCcEEEE
Confidence            46788888888886   888888888865

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.99  E-value=0.00026  Score=44.94  Aligned_cols=25  Identities=36%  Similarity=0.941  Sum_probs=17.7

Q ss_pred             eeCCCCCCCCc---CcCCCCCcccEEEE
Q 031581           88 QPCFPCSGSGA---QRCRFCMGTGSVTV  112 (157)
Q Consensus        88 ~~C~~C~GsG~---~~C~~C~GsG~v~~  112 (157)
                      .+|+.|+|+|.   ..|+.|+|+|.+..
T Consensus        10 ~~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A           10 TTCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             EECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             ccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            67777777776   56777777776654

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.96  E-value=0.00038  Score=44.20  Aligned_cols=25  Identities=28%  Similarity=0.745  Sum_probs=17.4

Q ss_pred             eeCCCCCCCCc---CcCCCCCcccEEEE
Q 031581           88 QPCFPCSGSGA---QRCRFCMGTGSVTV  112 (157)
Q Consensus        88 ~~C~~C~GsG~---~~C~~C~GsG~v~~  112 (157)
                      ..|+.|+|+|.   .+|+.|+|+|.++.
T Consensus        10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~~   37 (53)
T 2bx9_A           10 VACPKCERAGEIEGTPCPACSGKGVILT   37 (53)
T ss_dssp             EECTTTTTSSEETTEECTTTTTSSEEEC
T ss_pred             ccCCCCcceeccCCCCCccCCCCccEEE
Confidence            57777777776   56777777776654

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.83  E-value=0.00097  Score=42.29  Aligned_cols=25  Identities=28%  Similarity=0.846  Sum_probs=16.1

Q ss_pred             eeeCCCCCCCceE---eCCCCCCeeEEE
Q 031581          121 FSKCINCDGVGSL---TCTTCQGTGIQP  145 (157)
Q Consensus       121 ~~~C~~C~G~G~~---~C~~C~G~G~~~  145 (157)
                      ..+|+.|+|.|.+   +|+.|+|.|.+.
T Consensus         9 ~~~C~~C~GsG~~~~~~C~~C~G~G~v~   36 (53)
T 2bx9_A            9 EVACPKCERAGEIEGTPCPACSGKGVIL   36 (53)
T ss_dssp             EEECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred             cccCCCCcceeccCCCCCccCCCCccEE
Confidence            3456666666665   677777777654

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=96.40  E-value=6.2e-05  Score=69.20  Aligned_cols=78  Identities=15%  Similarity=0.292  Sum_probs=57.1

Q ss_pred             EEEEEEecceeeeeeEEeEeeeeeecccccCCCceeCCCCCCCCc---------CcCCCCCcccEEEE-----------E
Q 031581           54 VVAISVGLVSVAVGIGIPIFYETQIDNAAKRENTQPCFPCSGSGA---------QRCRFCMGTGSVTV-----------E  113 (157)
Q Consensus        54 ~~~l~vsl~~~~~G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~---------~~C~~C~GsG~v~~-----------~  113 (157)
                      .+.++++|++++.|.++++.+.+.          ..|..|+|+|+         .+|+.|+|+.....           +
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~----------~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~i  237 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSI----------DTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSK  237 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCS----------HHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHH
T ss_pred             eEEEEEEhHHhhCCCceEEEeccC----------CcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeee
Confidence            356788999999999999999888          89999988875         68999999842211           1


Q ss_pred             cCCCe-eeeeeCCCCCCCce--------------EeCCCCCCe
Q 031581          114 LGGDE-REFSKCINCDGVGS--------------LTCTTCQGT  141 (157)
Q Consensus       114 ~~G~~-~~~~~C~~C~G~G~--------------~~C~~C~G~  141 (157)
                      +.|+| +....|..|+..+.              ..|..|+..
T Consensus       238 H~G~fP~~~~~C~~CH~~~~~la~~~~w~~~ps~~aC~sCH~~  280 (669)
T 3pmq_A          238 HLTGFPQSISNCQTCHADNPDLADRQNWYRVPTMEACGACHTQ  280 (669)
T ss_dssp             TTSSCSSCTTCCTTTSCCCTTCCSCSCTTTCCCHHHHHHHCCS
T ss_pred             eccCCCCccCcchhhcCCccccccccccccCCchhhhhhccCC
Confidence            22444 45567888888764              168888753

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=96.17  E-value=0.0016  Score=50.32  Aligned_cols=27  Identities=15%  Similarity=0.126  Sum_probs=21.2

Q ss_pred             CCCeEEEEEEecceeeeeeEEeEeeee
Q 031581           50 DQNTVVAISVGLVSVAVGIGIPIFYET   76 (157)
Q Consensus        50 ~~d~~~~l~vsl~~~~~G~~~~v~~~~   76 (157)
                      ++|+++.|.++|+|+|.|.++.+.+.+
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~   28 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH   28 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec
Confidence            468889999999999999999998764

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=90.91  E-value=0.11  Score=39.72  Aligned_cols=28  Identities=18%  Similarity=0.139  Sum_probs=25.7

Q ss_pred             CCCeEEEEEEecceeeeeeEEeEeeeee
Q 031581           50 DQNTVVAISVGLVSVAVGIGIPIFYETQ   77 (157)
Q Consensus        50 ~~d~~~~l~vsl~~~~~G~~~~v~~~~~   77 (157)
                      ++|+++.|.++|+|+|.|.++.+.+.+.
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~   30 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRK   30 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEE
Confidence            4689999999999999999999999987

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=83.58  E-value=0.45  Score=35.93  Aligned_cols=27  Identities=19%  Similarity=0.193  Sum_probs=24.1

Q ss_pred             CCeEEEEEEecceeeeeeEEeEeeeee
Q 031581           51 QNTVVAISVGLVSVAVGIGIPIFYETQ   77 (157)
Q Consensus        51 ~d~~~~l~vsl~~~~~G~~~~v~~~~~   77 (157)
                      +|+++.|.++|+++|.|.++.+.+.+.
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~   27 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRK   27 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEe
Confidence            478999999999999999999988763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	157
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.51
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.32
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	98.32
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.98
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	95.86
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	92.54
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	91.24
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	85.95

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=3.3e-15  Score=101.18  Aligned_cols=69  Identities=38%  Similarity=0.737  Sum_probs=60.0

Q ss_pred             eeEEeEeeeeeecccccCCCceeCCCCCCCCc------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE---eCCC
Q 031581           67 GIGIPIFYETQIDNAAKRENTQPCFPCSGSGA------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL---TCTT  137 (157)
Q Consensus        67 G~~~~v~~~~~~~~~~~~~~~~~C~~C~GsG~------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~---~C~~  137 (157)
                      |++++|.|++.          ..|+.|+|+|+      ..|+.|+|+|++.... |+++.+++|+.|+|+|++   +|..
T Consensus         1 G~~k~i~i~~~----------~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~-g~~~~~~~C~~C~G~G~~i~~~C~~   69 (79)
T d1exka_           1 GVTKEIRIPTL----------EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ-GFFAVQQTCPHCQGRGTLIKDPCNK   69 (79)
T ss_dssp             CTTTSCCCCCE----------EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE-TTEEEEEECTTTTTSSEECSSBCGG
T ss_pred             CceEEEEeeee----------ccCCCCcCcccCCCccceeCCCccceeEEEEec-ccceeeEECcccCcceeECCCCCCC
Confidence            45667777777          99999999996      6799999999986544 788888999999999998   9999


Q ss_pred             CCCeeEEEe
Q 031581          138 CQGTGIQPR  146 (157)
Q Consensus       138 C~G~G~~~~  146 (157)
                      |+|.|++++
T Consensus        70 C~G~G~v~k   78 (79)
T d1exka_          70 CHGHGRVER   78 (79)
T ss_dssp             GTTSSEEEC
T ss_pred             CCCceEeec
Confidence            999999875

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=9.4e-13  Score=87.92  Aligned_cols=59  Identities=31%  Similarity=0.735  Sum_probs=50.2

Q ss_pred             eeCCCCCCCCc-----CcCCCCCcccEEEEEc-CC--CeeeeeeCCCCCCCceE-----eCCCCCCeeEEEe
Q 031581           88 QPCFPCSGSGA-----QRCRFCMGTGSVTVEL-GG--DEREFSKCINCDGVGSL-----TCTTCQGTGIQPR  146 (157)
Q Consensus        88 ~~C~~C~GsG~-----~~C~~C~GsG~v~~~~-~G--~~~~~~~C~~C~G~G~~-----~C~~C~G~G~~~~  146 (157)
                      ++|+.|+|+|+     .+|+.|+|+|++.... .|  .+++..+|+.|+|+|++     +|..|+|+|++++
T Consensus         3 v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           3 ILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             cCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            89999999996     7899999999987654 33  34677899999999976     7999999998763

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=98.32  E-value=1.3e-07  Score=62.89  Aligned_cols=46  Identities=35%  Similarity=0.790  Sum_probs=38.6

Q ss_pred             cccccCCCceeCCCCCCCCc-----------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581           79 DNAAKRENTQPCFPCSGSGA-----------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus        79 ~~~~~~~~~~~C~~C~GsG~-----------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      +|+.+......|+.|+|+|.           ++|+.|+|+|+++         ..+|..|+|.|.+
T Consensus        20 ~G~~~g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i---------~~~C~~C~G~G~v   76 (79)
T d1exka_          20 SGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI---------KDPCNKCHGHGRV   76 (79)
T ss_dssp             TSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC---------SSBCGGGTTSSEE
T ss_pred             cccCCCccceeCCCccceeEEEEecccceeeEECcccCcceeEC---------CCCCCCCCCceEe
Confidence            45555566688999999996           7899999999986         3689999999986

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.98  E-value=1.1e-06  Score=57.56  Aligned_cols=40  Identities=30%  Similarity=0.806  Sum_probs=34.1

Q ss_pred             ceeCCCCCCCCc---------------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581           87 TQPCFPCSGSGA---------------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus        87 ~~~C~~C~GsG~---------------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      ...|+.|+|+|.               .+|+.|.|+|+++..       ..+|..|+|.|.+
T Consensus        18 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~-------~~~C~~C~G~g~v   72 (74)
T d1nlta3          18 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP-------KDRCKSCNGKKVE   72 (74)
T ss_dssp             CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT-------TSBCSSSTTSCEE
T ss_pred             CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCC-------CCCCCCCCCeeEe
Confidence            467999999996               789999999998632       4689999999975

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=95.86  E-value=1.4e-05  Score=53.18  Aligned_cols=59  Identities=20%  Similarity=0.451  Sum_probs=44.1

Q ss_pred             eCCCCCCCCc---------CcCCCCCcccEEEEEc---CCCeeeeeeCCCCCCCceE---eCCCCCCeeEEEee
Q 031581           89 PCFPCSGSGA---------QRCRFCMGTGSVTVEL---GGDEREFSKCINCDGVGSL---TCTTCQGTGIQPRY  147 (157)
Q Consensus        89 ~C~~C~GsG~---------~~C~~C~GsG~v~~~~---~G~~~~~~~C~~C~G~G~~---~C~~C~G~G~~~~~  147 (157)
                      .|..|+|.|.         ..|..|+|+|......   .+.+..-..|..|.|.+..   .|.+|++.|.++..
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~~~   86 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSAS   86 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCHHH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccccc
Confidence            6999998875         3599999999764322   1334556788889888865   89999999865543

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.54  E-value=0.024  Score=36.28  Aligned_cols=27  Identities=19%  Similarity=0.193  Sum_probs=24.4

Q ss_pred             CCeEEEEEEecceeeeeeEEeEeeeee
Q 031581           51 QNTVVAISVGLVSVAVGIGIPIFYETQ   77 (157)
Q Consensus        51 ~d~~~~l~vsl~~~~~G~~~~v~~~~~   77 (157)
                      +++.+.|.++|+|+|.|.++.+.+.+.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~   27 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK   27 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee
Confidence            578999999999999999999988775

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.24  E-value=0.066  Score=33.70  Aligned_cols=28  Identities=14%  Similarity=0.131  Sum_probs=24.6

Q ss_pred             CCCeEEEEEEecceeeeeeEEeEeeeee
Q 031581           50 DQNTVVAISVGLVSVAVGIGIPIFYETQ   77 (157)
Q Consensus        50 ~~d~~~~l~vsl~~~~~G~~~~v~~~~~   77 (157)
                      ++|+.+.|.++|++++.|.++.+.+.+.
T Consensus         4 g~di~~~l~isleea~~G~~~~~~~~~~   31 (74)
T d1nlta1           4 GKDIKHEISASLEELYKGRTAKLALNRK   31 (74)
T ss_dssp             CCCEEEEEEECTTHHHHCEEEEEEEEEE
T ss_pred             CCCEEEEEEecHHHHHhhcccceeecCc
Confidence            4789999999999999999999877654

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=85.95  E-value=0.022  Score=36.79  Aligned_cols=37  Identities=19%  Similarity=0.436  Sum_probs=27.2

Q ss_pred             eeCCCCCCCCc---------------CcCCCCCcccEEEEEcCCCeeeeeeCCCCCCCceE
Q 031581           88 QPCFPCSGSGA---------------QRCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL  133 (157)
Q Consensus        88 ~~C~~C~GsG~---------------~~C~~C~GsG~v~~~~~G~~~~~~~C~~C~G~G~~  133 (157)
                      ..|..|+|.|.               ..|..|+|.|..+         ...|..|.+.|..
T Consensus        32 ~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~---------~~~C~~CH~~gr~   83 (90)
T d1m1qa_          32 AQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQ---------KPTCESCHDDGRT   83 (90)
T ss_dssp             HHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTC---------CCCSTTTCSSCCC
T ss_pred             CcCcccCCCceeEeeccccccCccccccCccccCCCCcC---------CCccccccCCCcc
Confidence            46888888875               6677777777644         3679999988753