Citrus Sinensis ID: 031673

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
Protein Sequence
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Secondary Structure (PSIPRED)
ccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHcccHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcEEEEEEc
Coil and Loop (DISEMBL)
mekgkgvmgsgrrwavdftdnsttpstrdiadppgfsrasqdqddstlsRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQpisalqgvgkvfepykdskvdllgpKLLFIALNLGGLALGVWKVRIHYTYTI
Flexible Loop (DISEMBL)
mekgkgvmgsgrrwavdftdnsttpstrdiadppgfsrasqdqddstLSRQKKdaeanwksqkawEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNlgglalgvwKVRIHYTYTI
Low Complexity Region (SEG)
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLmmmgfmmwmAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Disordered region (IsUnstruct)
**************************************************************KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYT*
Disordered Region (DISOPRED)
**************************************************************KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Disordered Region (DISEMBL)
**********GRRWAVDFTD********DIADPPGF***************************AWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Disordered Region (DISPRO)
***********RRWA**FTD*********************************DAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVRIHYTYTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	155	2.2.26 [Sep-21-2011]
Q6P011	189	ER membrane protein compl	yes	no	0.832	0.682	0.295	6e-10
Q6GR43	180	ER membrane protein compl	N/A	no	0.870	0.75	0.315	2e-09
O94520	193	ER membrane protein compl	yes	no	0.664	0.533	0.278	8e-09
Q6PBF7	180	ER membrane protein compl	yes	no	0.870	0.75	0.308	1e-08
Q9CZX9	183	ER membrane protein compl	yes	no	0.561	0.475	0.329	4e-08
Q5RC35	183	ER membrane protein compl	yes	no	0.561	0.475	0.329	5e-08
Q5J8M3	183	ER membrane protein compl	yes	no	0.561	0.475	0.329	5e-08
Q3T0K8	183	ER membrane protein compl	yes	no	0.561	0.475	0.329	5e-08
B5XB24	188	ER membrane protein compl	N/A	no	0.729	0.601	0.283	7e-08
P53073	190	ER membrane protein compl	yes	no	0.677	0.552	0.263	6e-06

>sp|Q6P011|EMC4_DANRE ER membrane protein complex subunit 4 OS=Danio rerio GN=emc4 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 13  RWAVDFT-DNSTTPSTR-----DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWE 66
           +WAV+ +  NS + S R     D+  P G+S      D        ++A+ N   ++ W+
Sbjct: 24  KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNLVEKRCWD 77

Query: 67  VAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLL 126
           VA  P K + M  F+M+M+G+T+ +F I +     W+PI AL  +   F+  + S    L
Sbjct: 78  VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 137

Query: 127 GPKLLFIALNLGGLALGVWKVR 148
              L+++  NL G AL ++K +
Sbjct: 138 -QGLVYLIGNLLGSALAIYKCQ 158

May mediate anti-apoptotic activity.
Danio rerio (taxid: 7955)

>sp|Q6GR43|EMC4_XENLA ER membrane protein complex subunit 4 OS=Xenopus laevis GN=emc4 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 14/149 (9%)

Query: 7   VMGSGRR--WAVDFTDNSTTPST-----RDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct: 8   VTNRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K  + W++A  P K + M  F+M+MAG+T+ +F I +     W+PI AL      F+  +
Sbjct: 64  K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
            S    L   L+++  NL GLALGV+K +
Sbjct: 122 SSGQRFLQ-GLVYLIGNLLGLALGVYKCQ 149

May mediate anti-apoptotic activity.

Xenopus laevis (taxid: 8355)

>sp|O94520|YQ13_SCHPO ER membrane protein complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1281.03c PE=3 SV=1

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 46  STLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPI 105
           S  ++++++ + +   +KAWE+A +P K + M   + +M+G+++ +FSI  T   L  P+
Sbjct: 57  SIFAKREEELQKDLLLKKAWELAYSPLKQIPMNAILAYMSGNSLQIFSIMTTLMLLVNPL 116

Query: 106 SALQGVGKVFEPYKDSKVDLLGPKL-LFIALNLGGLALGVWKVR 148
            A+   G  F P+K +    L P +  +I   L  + +GV+K++
Sbjct: 117 KAITSTGSAFTPFKGTHPGTLWPAMGAYILFQLLLMGIGVYKLQ 160

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6PBF7|EMC4_XENTR ER membrane protein complex subunit 4 OS=Xenopus tropicalis GN=emc4 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 14/149 (9%)

Query: 7   VMGSGRR--WAVDFTDNSTTPST-----RDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct: 8   VANRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K  + W++A  P K + M  F+M+MAG+T+ +F I +     W+PI AL      F+  +
Sbjct: 64  K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
            S    L   L+++  NL GLAL V+K +
Sbjct: 122 SSGQRFLQ-GLVYLIGNLLGLALAVYKCQ 149

May mediate anti-apoptotic activity.

Xenopus tropicalis (taxid: 8364)

>sp|Q9CZX9|EMC4_MOUSE ER membrane protein complex subunit 4 OS=Mus musculus GN=Emc4 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           S    L   L+++  NL GLAL V+K +
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQ 152

May mediate anti-apoptotic activity.

Mus musculus (taxid: 10090)

>sp|Q5RC35|EMC4_PONAB ER membrane protein complex subunit 4 OS=Pongo abelii GN=EMC4 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           S    L   L+++  NL GLAL V+K +
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQ 152

May mediate anti-apoptotic activity.

Pongo abelii (taxid: 9601)

>sp|Q5J8M3|EMC4_HUMAN ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           S    L   L+++  NL GLAL V+K +
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQ 152

May mediate anti-apoptotic activity.

Homo sapiens (taxid: 9606)

>sp|Q3T0K8|EMC4_BOVIN ER membrane protein complex subunit 4 OS=Bos taurus GN=EMC4 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            ++ W++A  P K + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + 
Sbjct: 66  EKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLES 125

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           S    L   L+++  NL GLAL V+K +
Sbjct: 126 SSQKFL-QGLVYLIGNLMGLALAVYKCQ 152

May mediate anti-apoptotic activity.

Bos taurus (taxid: 9913)

>sp|B5XB24|EMC4_SALSA ER membrane protein complex subunit 4 OS=Salmo salar GN=emc4 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 29  DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGST 88
           D+  P G+S      D        ++ + N   ++ W+VA  P K + M  F+M+M+G+T
Sbjct: 45  DVMYPIGYS------DKPVPDTSIQETDKNLVEKRCWDVALGPLKQIPMNLFIMYMSGNT 98

Query: 89  VHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           + +F I +     W+PI AL  +   F+  ++S    L   L++   NL G AL ++K +
Sbjct: 99  ISIFPIMMVCMMAWRPIQALMSMSATFKLLENSNQQWL-QGLVYSVGNLLGSALAIYKCQ 157

May mediate anti-apoptotic activity.

Salmo salar (taxid: 8030)

>sp|P53073|EMC4_YEAST ER membrane protein complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMC4 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 18  FTDNSTTPSTRDIADPPGF---------SRASQDQDDSTLSRQKKDAEANWKSQKAWEVA 68
           + +     ++  +  PPGF         +R  QD    T S  +K+     + QKAW++A
Sbjct: 18  YIEKYNIQNSNTLPSPPGFEGNSSKGNVTRKQQDATSQTTSLAQKNQITVLQVQKAWQIA 77

Query: 69  QAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 122
             P K++ M  FM +M+G+++ +  I      L  PI A+      F+P   +K
Sbjct: 78  LQPAKSIPMNIFMSYMSGTSLQIIPIMTALMLLSGPIKAIFSTRSAFKPVLGNK 131

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
225430525	179	PREDICTED: transmembrane protein 85 [Vit	0.948	0.821	0.932	2e-73
224143349	180	predicted protein [Populus trichocarpa]	0.954	0.822	0.871	1e-71
224092629	180	predicted protein [Populus trichocarpa]	0.954	0.822	0.871	2e-71
356563993	178	PREDICTED: transmembrane protein 85-like	0.935	0.814	0.872	3e-68
357437087	178	Transmembrane protein [Medicago truncatu	0.935	0.814	0.859	1e-67
351721760	178	uncharacterized protein LOC100305631 [Gl	0.935	0.814	0.859	2e-67
255627143	175	unknown [Glycine max]	0.935	0.828	0.859	2e-67
358349297	178	Transmembrane protein [Medicago truncatu	0.935	0.814	0.852	3e-67
255548686	180	conserved hypothetical protein [Ricinus	0.954	0.822	0.891	1e-66
449455501	180	PREDICTED: ER membrane protein complex s	0.954	0.822	0.891	1e-66

>gi|225430525|ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis vinifera] gi|147864285|emb|CAN83012.1| hypothetical protein VITISV_010104 [Vitis vinifera] gi|296082155|emb|CBI21160.3| unnamed protein product [Vitis vinifera]

 Score =  279 bits (714), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/148 (93%), Positives = 142/148 (95%), Gaps = 1/148 (0%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKGVMG GRRWAVD TD STTPS+RDI DPPGFSRAS DQDDSTLSRQKKDAEANWK
Sbjct: 1   MEKGKGVMG-GRRWAVDLTDYSTTPSSRDIPDPPGFSRASLDQDDSTLSRQKKDAEANWK 59

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 60  AQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 119

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           SKVDLLGPKLLFIALNLGGLALGVWK+ 
Sbjct: 120 SKVDLLGPKLLFIALNLGGLALGVWKLN 147

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143349|ref|XP_002324924.1| predicted protein [Populus trichocarpa] gi|118487965|gb|ABK95804.1| unknown [Populus trichocarpa] gi|222866358|gb|EEF03489.1| predicted protein [Populus trichocarpa]

 Score =  274 bits (700), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 129/148 (87%), Positives = 140/148 (94%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           M+KGK VMGSGRRWAVDFTDNSTTPS+RDI DPPGF R SQ+QDDS +++QKKDAEANWK
Sbjct: 1   MDKGKAVMGSGRRWAVDFTDNSTTPSSRDIPDPPGFYRTSQEQDDSAVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           SQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPI ALQGVGKVFEPYKD
Sbjct: 61  SQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           SKVDLL PKL+FIALNLGGLALG+WK+ 
Sbjct: 121 SKVDLLAPKLIFIALNLGGLALGIWKLN 148

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092629|ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|222855663|gb|EEE93210.1| predicted protein [Populus trichocarpa]

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/148 (87%), Positives = 141/148 (95%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           M+KGK VMGSGRRWAVDFTDNST PS+RDI DPPGFSRASQDQ+DS +++QKKDAEANWK
Sbjct: 1   MDKGKAVMGSGRRWAVDFTDNSTLPSSRDIPDPPGFSRASQDQEDSAVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPI ALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           SKVDLL PKL+FIALNLGGLALG+WK+ 
Sbjct: 121 SKVDLLVPKLVFIALNLGGLALGIWKLN 148

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563993|ref|XP_003550241.1| PREDICTED: transmembrane protein 85-like [Glycine max]

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/149 (87%), Positives = 139/149 (93%), Gaps = 4/149 (2%)

Query: 1   MEKGKGVMGSG-RRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           MEKGKGVMGSG RRW VDF+DNST+   RDI DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MEKGKGVMGSGGRRWGVDFSDNSTS---RDIPDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K+QKAWEVAQAP KNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KAQKAWEVAQAPMKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           D+KV+LLGPKLLFIALNLGGLALGVWK+ 
Sbjct: 118 DNKVELLGPKLLFIALNLGGLALGVWKLN 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437087|ref|XP_003588819.1| Transmembrane protein [Medicago truncatula] gi|355477867|gb|AES59070.1| Transmembrane protein [Medicago truncatula]

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/149 (85%), Positives = 140/149 (93%), Gaps = 4/149 (2%)

Query: 1   MEKGKGVMGS-GRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           M+KGKGVMGS GRRWAVDF+DNST+   RDI DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MDKGKGVMGSSGRRWAVDFSDNSTS---RDIIDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           KSQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KSQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           D+KV+LLGPKL+FIALNLGG+ LGVWK+ 
Sbjct: 118 DAKVELLGPKLVFIALNLGGMLLGVWKLN 146

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721760|ref|NP_001238244.1| uncharacterized protein LOC100305631 [Glycine max] gi|255626141|gb|ACU13415.1| unknown [Glycine max]

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/149 (85%), Positives = 138/149 (92%), Gaps = 4/149 (2%)

Query: 1   MEKGKGVMGSG-RRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           MEKGKGVMGSG RRW VDF+DNST+   RDI DPPGFSR S DQDDSTLSRQKKDAE+NW
Sbjct: 1   MEKGKGVMGSGGRRWGVDFSDNSTS---RDIPDPPGFSRTSLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K+QKAWEVAQAP KNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KAQKAWEVAQAPMKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           D+KV+LLGPKLLFIALNLGGLALG+WK+ 
Sbjct: 118 DNKVELLGPKLLFIALNLGGLALGIWKLN 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255627143|gb|ACU13916.1| unknown [Glycine max]

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/149 (85%), Positives = 137/149 (91%), Gaps = 4/149 (2%)

Query: 1   MEKGKGVMGSG-RRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           MEKGKGVMGSG RRW VDF+DNST+   RDI DPPGF R S DQDDSTLSRQKKDAE+NW
Sbjct: 1   MEKGKGVMGSGGRRWGVDFSDNSTS---RDIPDPPGFCRTSLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           K+QKAWEVAQAP KNL+MMGFMMWMAGSTVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KAQKAWEVAQAPMKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           D+KV+LLGPKLLFIALNLGGLALGVWK+ 
Sbjct: 118 DNKVELLGPKLLFIALNLGGLALGVWKLN 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358349297|ref|XP_003638675.1| Transmembrane protein [Medicago truncatula] gi|355504610|gb|AES85813.1| Transmembrane protein [Medicago truncatula]

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 139/149 (93%), Gaps = 4/149 (2%)

Query: 1   MEKGKGVMGS-GRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
           M+KGKGVMGS GRRWAVDF+DNST+   RD  DPPGFSRAS DQDDSTLSRQKKDAE+NW
Sbjct: 1   MDKGKGVMGSSGRRWAVDFSDNSTS---RDFIDPPGFSRASLDQDDSTLSRQKKDAESNW 57

Query: 60  KSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
           KSQKAWEVAQAPFKNL+MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEPYK
Sbjct: 58  KSQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKMFEPYK 117

Query: 120 DSKVDLLGPKLLFIALNLGGLALGVWKVR 148
           D+KV+LLGPKL+FIALNLGG+ LGVWK+ 
Sbjct: 118 DAKVELLGPKLVFIALNLGGMLLGVWKLN 146

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548686|ref|XP_002515399.1| conserved hypothetical protein [Ricinus communis] gi|223545343|gb|EEF46848.1| conserved hypothetical protein [Ricinus communis]

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/148 (89%), Positives = 143/148 (96%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKGVMGSGRRWA+DFTDNS  PS+RD+ DPPGFSRASQDQDDST+++QKKDAEANWK
Sbjct: 1   MEKGKGVMGSGRRWAIDFTDNSNLPSSRDVPDPPGFSRASQDQDDSTVTKQKKDAEANWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAPFKNLMMMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           S+VDL GPKLLFIALNLGGLALG+WK+ 
Sbjct: 121 SRVDLNGPKLLFIALNLGGLALGIWKLN 148

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455501|ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus]

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/148 (89%), Positives = 140/148 (94%)

Query: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
           MEKGKG+M   RRWAVDF+DNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKVR 148
           SKVDLLGPKLLFIALNLGGLALGVWK+ 
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLN 148

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
TAIR|locus:2183745	187	AT5G10780 "AT5G10780" [Arabido	0.948	0.786	0.768	1.5e-58
WB|WBGene00022776	174	perm-3 [Caenorhabditis elegans	0.864	0.770	0.272	2e-10
CGD|CAL0003124	176	orf19.7183 [Candida albicans (	0.787	0.693	0.290	1.1e-09
DICTYBASE|DDB_G0295773	197	DDB_G0295773 "DUF1077 family p	0.812	0.639	0.251	1.1e-09
UNIPROTKB|Q5A0B2	176	CaO19.7183 "Putative uncharact	0.787	0.693	0.290	1.1e-09
ZFIN|ZDB-GENE-040426-1891	189	emc4 "ER membrane protein comp	0.819	0.671	0.271	9.7e-09
POMBASE|SPCC1281.03c	193	emc4 "ER membrane protein comp	0.664	0.533	0.259	1.6e-08
UNIPROTKB|Q6GR43	180	emc4 "ER membrane protein comp	0.858	0.738	0.292	6.8e-08
UNIPROTKB|E2R5T1	183	EMC4 "Uncharacterized protein"	0.922	0.781	0.256	8.7e-08
UNIPROTKB|Q6PBF7	180	emc4 "ER membrane protein comp	0.858	0.738	0.285	2.9e-07

TAIR|locus:2183745 AT5G10780 "AT5G10780" [Arabidopsis thaliana (taxid:3702)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 113/147 (76%), Positives = 128/147 (87%)

Query:     1 MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60
             M+KGK VMG+GRRWAV+F+D ST PS+RDI DPPGFSRASQ+QDDS  SRQKKDAEA WK
Sbjct:     1 MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query:    61 SQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
              QKAWEVAQ+PFKNL         AG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct:    61 LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query:   121 SKVDLLGPKLLFIALNLGGLALGVWKV 147
             +KV+LL PKL+F+ALNLGGLALGVWK+
Sbjct:   121 NKVELLMPKLVFLALNLGGLALGVWKL 147

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

WB|WBGene00022776 perm-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 37/136 (27%), Positives = 62/136 (45%)

Query:    14 WAVDFTDNSTTPSTRDIA-DPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPF 72
             W +D+T +S    T D   +PPGF   +     S  + +  D   +   ++ W+ A  P 
Sbjct:     6 WKLDYTYSSKNCRTADSNFNPPGFYSTAATVQHSAEADRSADQHEHLARKRVWDTAMGPA 65

Query:    73 KNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKV-DLLGPKLL 131
             K+L         AG  V +F I +    +++P+ AL  V   F+P +      +   KL+
Sbjct:    66 KSLPMNMFMMYMAGGGVSIFPIMMVGMMVFRPLKALFAVNSTFKPLESPATGSMFIHKLI 125

Query:   132 FIALNLGGLALGVWKV 147
             F   NLG + L ++KV
Sbjct:   126 FCLGNLGAIGLAIYKV 141

GO:0016021 "integral to membrane" evidence=IEA

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

CGD|CAL0003124 orf19.7183 [Candida albicans (taxid:5476)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 38/131 (29%), Positives = 66/131 (50%)

Query:    26 STRDIADPPGFSRA--SQDQDDSTLSRQKK---DAEAN-WKSQKAWEVAQAPFKNLXXXX 79
             S  D+  PPG+S +  S     ST S +K    DA+ N  KS+K WE+A  P K++    
Sbjct:    18 SKNDVPPPPGYSESVFSTATKSSTSSGKKTKHDDADLNALKSKKIWELAIGPAKSIPMNL 77

Query:    80 XXXXXAGSTVHLFSIGITFSALWQPISAL-QGVGKVFEPY--KDSKVDLLGPKLLFIALN 136
                   G+++ + S+ +T   LW PI A+       F     K++  +++  K++FI   
Sbjct:    78 FMSYMTGNSLQVISVTMTLMLLWNPIKAIFNETNPTFSKLSTKNNGSEIILAKIVFIICQ 137

Query:   137 LGGLALGVWKV 147
             +  + +GV+K+
Sbjct:   138 VLNMGIGVYKL 148

GO:0003674 "molecular_function" evidence=ND

GO:0072546 "ER membrane protein complex" evidence=IEA

GO:0034975 "protein folding in endoplasmic reticulum" evidence=IEA

DICTYBASE|DDB_G0295773 DDB_G0295773 "DUF1077 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 32/127 (25%), Positives = 64/127 (50%)

Query:    20 DNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXX 79
             +N   P T   ++ P  S +SQ Q  S   +     +   K++K WE+A++P KN+    
Sbjct:    40 NNLPLPLTSGGSESP-ISTSSQPQVSSQPQQLSTKQQMELKAKKGWELAKSPAKNIFMTG 98

Query:    80 XXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGG 139
                   G+ +++F++ +   A+  P+ A+     +F  + D K D++  KL F+ + L  
Sbjct:    99 FFLWMIGNGINIFTMPVIIYAVINPVKAIFQTNTMFSRFNDCKGDIIQMKLTFVVIQLAL 158

Query:   140 LALGVWK 146
             L++ ++K
Sbjct:   159 LSVTLYK 165

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q5A0B2 CaO19.7183 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 38/131 (29%), Positives = 66/131 (50%)

Query:    26 STRDIADPPGFSRA--SQDQDDSTLSRQKK---DAEAN-WKSQKAWEVAQAPFKNLXXXX 79
             S  D+  PPG+S +  S     ST S +K    DA+ N  KS+K WE+A  P K++    
Sbjct:    18 SKNDVPPPPGYSESVFSTATKSSTSSGKKTKHDDADLNALKSKKIWELAIGPAKSIPMNL 77

Query:    80 XXXXXAGSTVHLFSIGITFSALWQPISAL-QGVGKVFEPY--KDSKVDLLGPKLLFIALN 136
                   G+++ + S+ +T   LW PI A+       F     K++  +++  K++FI   
Sbjct:    78 FMSYMTGNSLQVISVTMTLMLLWNPIKAIFNETNPTFSKLSTKNNGSEIILAKIVFIICQ 137

Query:   137 LGGLALGVWKV 147
             +  + +GV+K+
Sbjct:   138 VLNMGIGVYKL 148

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-040426-1891 emc4 "ER membrane protein complex subunit 4" [Danio rerio (taxid:7955)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 38/140 (27%), Positives = 69/140 (49%)

Query:    13 RWAVDFT-DNSTTPSTR-----DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWE 66
             +WAV+ +  NS + S R     D+  P G+S   +   D+++    ++A+ N   ++ W+
Sbjct:    24 KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS--DKPVPDTSV----QEADRNLVEKRCWD 77

Query:    67 VAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLL 126
             VA  P K +         +G+T+ +F I +     W+PI AL  +   F+  + S    L
Sbjct:    78 VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 137

Query:   127 GPKLLFIALNLGGLALGVWK 146
                L+++  NL G AL ++K
Sbjct:   138 -QGLVYLIGNLLGSALAIYK 156

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016020 "membrane" evidence=IEA

POMBASE|SPCC1281.03c emc4 "ER membrane protein complex subunit 4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 27/104 (25%), Positives = 55/104 (52%)

Query:    46 STLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPI 105
             S  ++++++ + +   +KAWE+A +P K +         +G+++ +FSI  T   L  P+
Sbjct:    57 SIFAKREEELQKDLLLKKAWELAYSPLKQIPMNAILAYMSGNSLQIFSIMTTLMLLVNPL 116

Query:   106 SALQGVGKVFEPYKDSKVDLLGPKL-LFIALNLGGLALGVWKVR 148
              A+   G  F P+K +    L P +  +I   L  + +GV+K++
Sbjct:   117 KAITSTGSAFTPFKGTHPGTLWPAMGAYILFQLLLMGIGVYKLQ 160

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0034975 "protein folding in endoplasmic reticulum" evidence=ISO

GO:0072546 "ER membrane protein complex" evidence=ISO

UNIPROTKB|Q6GR43 emc4 "ER membrane protein complex subunit 4" [Xenopus laevis (taxid:8355)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 43/147 (29%), Positives = 65/147 (44%)

Query:     7 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
             V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct:     8 VTNRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query:    60 KSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
             K  + W++A  P K +         AG+T+ +F I +     W+PI AL      F+  +
Sbjct:    64 K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query:   120 DSKVDLLGPKLLFIALNLGGLALGVWK 146
              S    L   L+++  NL GLALGV+K
Sbjct:   122 SSGQRFL-QGLVYLIGNLLGLALGVYK 147

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|E2R5T1 EMC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 38/148 (25%), Positives = 64/148 (43%)

Query:     3 KGKGVMGSGRR--WAVDFTD-NSTTPSTRDIADPPGFSRASQDQDDSTL-SRQKKDAEAN 58
             +G  V   GRR  WA++ +     + S  D     G S       D  +     ++A+  
Sbjct:     4 QGSLVANRGRRFKWAIELSGPGGGSRSRSDRGGGQGDSLYPVGYLDKQVPDTSVQEADRI 63

Query:    59 WKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPY 118
                ++ W++A  P K +         AG+T+ +F   +     W+PI AL  +   F+  
Sbjct:    64 LVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKML 123

Query:   119 KDSKVDLLGPKLLFIALNLGGLALGVWK 146
             + S    L   L+++  NL GLAL V+K
Sbjct:   124 ESSSQKFL-QGLVYLIGNLMGLALAVYK 150

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|Q6PBF7 emc4 "ER membrane protein complex subunit 4" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 42/147 (28%), Positives = 64/147 (43%)

Query:     7 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANW 59
             V   GRR  WA++F    +         +D   P G+S    D+     S Q+ D     
Sbjct:     8 VANRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS----DKQVPDTSVQESDHILVE 63

Query:    60 KSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYK 119
             K  + W++A  P K +         AG+T+ +F I +     W+PI AL      F+  +
Sbjct:    64 K--RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE 121

Query:   120 DSKVDLLGPKLLFIALNLGGLALGVWK 146
              S    L   L+++  NL GLAL V+K
Sbjct:   122 SSGQRFL-QGLVYLIGNLLGLALAVYK 147

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00032801001	SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence); (179 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00010881001	SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_292, whole gen [...] (246 aa)				•	•				0.603
	GSVIVG00015676001	SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (115 aa)				•			•		0.460

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	155
pfam06417	124	pfam06417, DUF1077, Protein of unknown function (D	4e-35

>gnl|CDD|219016 pfam06417, DUF1077, Protein of unknown function (DUF1077)

 Score =  118 bits (297), Expect = 4e-35
 Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 2/101 (1%)

Query: 49  SRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISAL 108
            +  K+   + K +KAW++A  P K+L M  FMM+M+G+++ +F I +    LW PI A+
Sbjct: 2   KQASKEESRHLKLKKAWDIALGPAKSLPMNLFMMYMSGNSLQIFPIMMVGMLLWNPIKAI 61

Query: 109 QGVGKVFEPYKDSKV--DLLGPKLLFIALNLGGLALGVWKV 147
                 F+P +++     LL  KL+++   L  LALG++K+
Sbjct: 62  LSTNSAFKPLENNSNRSQLLLQKLVYVLGQLLALALGLYKL 102

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 124

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	155
KOG3318	178	consensus Predicted membrane protein [Function unk	100.0
PF06417	124	DUF1077: Protein of unknown function (DUF1077); In	100.0

>KOG3318 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=7.6e-56  Score=353.13  Aligned_cols=144  Identities=44%  Similarity=0.769  Sum_probs=128.7

Q ss_pred             CCCCcceecccCCCCCCCCCCCCCCCCCCCCCCCCcchhhhhhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHhCCc
Q 031673            9 GSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGST   88 (155)
Q Consensus         9 ~~~~kW~~dl~~~~~~~~~~~lp~PpGy~~~~~~~~~~~~~~~~~~~~~~Lk~KkaWeiA~~P~K~ipMn~FMmyMsGns   88 (155)
                      +.+.+|++++++.....++.++|+||||.+++...++++.+.+++++.+.|+.|||||+|++|+||||||+|||||+|||
T Consensus         5 ~~~~~Wa~~~~~~~~~~nsd~~~~PpGf~~~s~~~~~s~~a~r~~d~~~~L~~kkaWdiAl~P~K~iPMN~FmmYMaGns   84 (178)
T KOG3318|consen    5 GEKLDWAVEFSDQSTVPNSDSIPSPPGFSRKSLVQQTSAEADRKKDQEATLVLKKAWDIALGPLKNIPMNLFMMYMAGNS   84 (178)
T ss_pred             ccccchHHHhCCcccCCcccCCCCCCCccccccccchHHHHhhhhhHHHHHHHHHHHHHhhChHhhccHHHHHHHHcCCc
Confidence            45789999999976554566789999999886554444444555677789999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHhhhcccccccccccc-ccchhhHHHHHHHHHHHHHHHHHhhccccc
Q 031673           89 VHLFSIGITFSALWQPISALQGVGKVFEPYKDSK-VDLLGPKLLFIALNLGGLALGVWKVRIHYT  152 (155)
Q Consensus        89 iqIFsImmv~m~~~~Pikai~~~~~~F~~~e~~~-~~~~~~klvyv~~ql~~l~lglyK~~smg~  152 (155)
                      |||||||||+|++|||||||++++++|++||+++ .+++.+|++||++|+++++||+||||+||-
T Consensus        85 vsIFpIMm~~Mml~~PikAl~st~stFkp~eg~~~~q~~~~~lvy~l~nL~~~~lgvyKlqsMGL  149 (178)
T KOG3318|consen   85 VSIFPIMMVLMMLWRPIKALFSTGSTFKPFEGNKASQLFMAKLVYLLGNLGGLALGVYKLQSMGL  149 (178)
T ss_pred             eEEeHHHHHHHHHHHHHHHHHhhhhhcccccCCchhhhHHHHHHHHHHhhhHHHHHHHhhhhcCC
Confidence            9999999999999999999999999999999976 789999999999999999999999999994

>PF06417 DUF1077: Protein of unknown function (DUF1077); InterPro: IPR009445 This family consists of several hypothetical eukaryotic proteins of unknown function

Probab=100.00  E-value=7.3e-50  Score=306.25  Aligned_cols=101  Identities=37%  Similarity=0.645  Sum_probs=96.5

Q ss_pred             hhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHhhhcccccccccccc----ccchh
Q 031673           52 KKDAEANWKSQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK----VDLLG  127 (155)
Q Consensus        52 ~~~~~~~Lk~KkaWeiA~~P~K~ipMn~FMmyMsGnsiqIFsImmv~m~~~~Pikai~~~~~~F~~~e~~~----~~~~~  127 (155)
                      +++++++|++|||||+|++|+||||||+|||||||||+||||||||+|+++||||||+++|++|++||++.    .++++
T Consensus         4 ~~~~~~~L~~KkAWeiA~~P~K~ipMn~FMmyMsGnsi~IFsIm~v~m~~~~Pikai~~~~~~F~~~~~~~~~~~~~~~~   83 (124)
T PF06417_consen    4 SKEQQDALKVKKAWEIALGPAKSIPMNLFMMYMSGNSIQIFSIMMVGMLLWNPIKAIFSVNQAFKPFEGDSNDNRSQLLL   83 (124)
T ss_pred             cHHHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHhCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999998863    48999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhccccc
Q 031673          128 PKLLFIALNLGGLALGVWKVRIHYT  152 (155)
Q Consensus       128 ~klvyv~~ql~~l~lglyK~~smg~  152 (155)
                      +|++||+||++++++|+||||+||-
T Consensus        84 ~kl~yvl~ql~~l~~gl~K~~~MGL  108 (124)
T PF06417_consen   84 QKLVYVLCQLLGLALGLYKCNSMGL  108 (124)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHccC
Confidence            9999999999999999999999994

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00