Citrus Sinensis ID: 031690

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
Protein Sequence
MVNSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTEKPDAAS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHHHHHccccccccccEEEEEEcccEEEEEcccEEEEccccEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHcHHHHcccEEEccccccHHHHHHHHHHccccccccEEEEEEEccccEEEEcccEEEEEccccEEEEEcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHccccHHcc
Coil and Loop (DISEMBL)
MVNSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRigvnaipaieevnifkddvvIQFLNPKVQASIAANTwvvsgapqtkklQDILPgiinqlgpdnlDNLRKLAEQFQkqapnagtgapttqeddddevpelvaGETFEAAAEektekpdaas
Flexible Loop (DISEMBL)
MVNSFLTLAlnhrkkkavhkttttddkrlqstlkrigvnaipaieevNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETfeaaaeektekpdaas
Low Complexity Region (SEG)
MVNSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVagetfeaaaeektekpdaaS
Disordered region (IsUnstruct)
******************************STLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLG************************************************************
Disordered Region (DISOPRED)
*VNSFLTLALNHR**************RLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLD***************************DDEVPELVAGETFEAA************
Disordered Region (DISEMBL)
MVNSFLTLALN***************KRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQ*****************EVPELVAGETFE**************
Disordered Region (DISPRO)
**NSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQ*******************PE****E*F**A************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVNSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTEKPDAAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	155	2.2.26 [Sep-21-2011]
P20290	206	Transcription factor BTF3	no	no	0.845	0.635	0.548	6e-33
Q64152	204	Transcription factor BTF3	no	no	0.845	0.642	0.548	7e-33
Q0CGL5	167	Nascent polypeptide-assoc	N/A	no	0.858	0.796	0.496	2e-32
Q5M8V0	158	Transcription factor BTF3	no	no	0.864	0.848	0.536	2e-31
Q4KLF5	158	Transcription factor BTF3	N/A	no	0.864	0.848	0.536	2e-31
A1DL98	183	Nascent polypeptide-assoc	N/A	no	0.851	0.721	0.503	2e-31
Q4WCX4	186	Nascent polypeptide-assoc	yes	no	0.845	0.704	0.507	2e-31
Q2KIY7	158	Transcription factor BTF3	no	no	0.851	0.835	0.518	4e-31
A1CMP1	164	Nascent polypeptide-assoc	N/A	no	0.858	0.810	0.496	4e-31
Q5RC59	158	Transcription factor BTF3	no	no	0.851	0.835	0.518	1e-30

>sp|P20290|BTF3_HUMAN Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1

 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 99/135 (73%), Gaps = 4/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AAN
Sbjct: 71  RRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAAN 130

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDE
Sbjct: 131 TFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDE 189

Query: 131 VPELVAGETFEAAAE 145
           VP+LV  E F+ A++
Sbjct: 190 VPDLV--ENFDEASK 202

General transcription factor. BTF3 can form a stable complex with RNA polymerase II. Required for the initiation of transcription.
Homo sapiens (taxid: 9606)

>sp|Q64152|BTF3_MOUSE Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3

 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 99/135 (73%), Gaps = 4/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AAN
Sbjct: 69  RRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAAN 128

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDE
Sbjct: 129 TFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDE 187

Query: 131 VPELVAGETFEAAAE 145
           VP+LV  E F+ A++
Sbjct: 188 VPDLV--ENFDEASK 200

General transcription factor. BTF3 can form a stable complex with RNA polymerase II. Required for the initiation of transcription.

Mus musculus (taxid: 10090)

>sp|Q0CGL5|NACB_ASPTN Nascent polypeptide-associated complex subunit beta OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd1 PE=3 SV=1

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 99/135 (73%), Gaps = 2/135 (1%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAAN 70
            RK K VHK++  DDK+LQ+TLK++ V  IPA+EEVN+FK+D  VI F NP+V AS+ +N
Sbjct: 34  RRKVKKVHKSSGADDKKLQATLKKMNVQPIPAVEEVNMFKEDGNVIHFGNPRVHASVPSN 93

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N   GA   ++D++D+
Sbjct: 94  TFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGAEGKKDDEEDD 152

Query: 131 VPELVAGETFEAAAE 145
           +P+LV G+ FE+  E
Sbjct: 153 IPDLVEGQDFESKVE 167

Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting (By similarity). The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the endoplasmic reticulum (By similarity). EGD1 may act as a transcription factor that exert a negative effect on the expression of several genes that are transcribed by RNA polymerase II.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

>sp|Q5M8V0|BT3L4_XENTR Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 100/136 (73%), Gaps = 2/136 (1%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++AN
Sbjct: 22  RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+
Sbjct: 82  TFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDD 141

Query: 131 VPELVAGETFEAAAEE 146
           VPELV G   EA+  E
Sbjct: 142 VPELV-GNFDEASKNE 156

Xenopus tropicalis (taxid: 8364)

>sp|Q4KLF5|BT3L4_XENLA Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 100/136 (73%), Gaps = 2/136 (1%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++AN
Sbjct: 22  RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+
Sbjct: 82  TFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDD 141

Query: 131 VPELVAGETFEAAAEE 146
           VPELV G   EA+  E
Sbjct: 142 VPELV-GNFDEASKNE 156

Xenopus laevis (taxid: 8355)

>sp|A1DL98|NACB_NEOFI Nascent polypeptide-associated complex subunit beta OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd1 PE=3 SV=1

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 3/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAAN 70
            RK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +N
Sbjct: 51  RRKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSN 110

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     AGT     +++D+D+
Sbjct: 111 TFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQAGTEG--KKDEDEDD 168

Query: 131 VPELVAGETFEAAAE 145
           +P+LV GE FE+  E
Sbjct: 169 IPDLVEGENFESNVE 183

Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting (By similarity). The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the endoplasmic reticulum (By similarity). EGD1 may act as a transcription factor that exert a negative effect on the expression of several genes that are transcribed by RNA polymerase II.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|Q4WCX4|NACB_ASPFU Nascent polypeptide-associated complex subunit beta OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=egd1 PE=3 SV=1

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 97/134 (72%), Gaps = 3/134 (2%)

Query: 13  RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANT 71
           RK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT
Sbjct: 55  RKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNT 114

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           + + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     A  GA   +++D+D++
Sbjct: 115 FALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQA--GAEGKKDEDEDDI 172

Query: 132 PELVAGETFEAAAE 145
           P+LV GE FE+  E
Sbjct: 173 PDLVEGENFESNVE 186

Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting (By similarity). The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the endoplasmic reticulum (By similarity). EGD1 may act as a transcription factor that exert a negative effect on the expression of several genes that are transcribed by RNA polymerase II.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q2KIY7|BT3L4_BOVIN Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++AN
Sbjct: 22  RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++ T  P   ++++D+
Sbjct: 82  TFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKTPKPEDIDEEEDD 141

Query: 131 VPELVAGETFEAAAE 145
           VP+LV  E F+ A++
Sbjct: 142 VPDLV--ENFDEASK 154

Bos taurus (taxid: 9913)

>sp|A1CMP1|NACB_ASPCL Nascent polypeptide-associated complex subunit beta OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=egd1 PE=3 SV=1

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 97/135 (71%), Gaps = 2/135 (1%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAAN 70
            RK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +N
Sbjct: 31  RRKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSN 90

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     +  GA   +++D+D+
Sbjct: 91  TFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQ-KSQAGAEGKKDEDEDD 149

Query: 131 VPELVAGETFEAAAE 145
           +P+LV GE FE+  E
Sbjct: 150 IPDLVEGENFESNVE 164

Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting (By similarity). The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the endoplasmic reticulum (By similarity). EGD1 may act as a transcription factor that exert a negative effect on the expression of several genes that are transcribed by RNA polymerase II.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|Q5RC59|BT3L4_PONAB Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAAN 70
            RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++AN
Sbjct: 22  RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81

Query: 71  TWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDE 130
           T+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+
Sbjct: 82  TFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDD 141

Query: 131 VPELVAGETFEAAAE 145
           VP+LV  E F+ A++
Sbjct: 142 VPDLV--ENFDEASK 154

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
217075480	160	unknown [Medicago truncatula] gi|3884942	0.870	0.843	0.874	3e-62
357473413	152	Nascent polypeptide-associated complex s	0.870	0.888	0.874	5e-62
351724395	159	uncharacterized protein LOC100500678 [Gl	0.870	0.849	0.866	2e-61
388507122	163	unknown [Lotus japonicus]	0.890	0.846	0.856	1e-60
217074804	159	unknown [Medicago truncatula] gi|3885185	0.870	0.849	0.866	1e-60
297850182	164	hypothetical protein ARALYDRAFT_312752 [	0.922	0.871	0.819	2e-60
388515145	163	unknown [Lotus japonicus]	0.890	0.846	0.848	2e-60
357456969	151	Nascent polypeptide-associated complex s	0.870	0.894	0.866	2e-60
388493890	170	unknown [Lotus japonicus]	0.851	0.776	0.874	2e-60
351725517	161	uncharacterized protein LOC100500153 [Gl	0.870	0.838	0.844	6e-60

>gi|217075480|gb|ACJ86100.1| unknown [Medicago truncatula] gi|388494246|gb|AFK35189.1| unknown [Medicago truncatula]

 Score =  242 bits (618), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 118/135 (87%), Positives = 127/135 (94%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIP IEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSGAPQTKKLQDILP II+QLGPDNL+NL+K+AEQFQKQAP AGTG+ T QE++DD+V
Sbjct: 82  WVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKIAEQFQKQAPEAGTGSATVQEENDDDV 141

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 142 PDLVPGETFETAAEE 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473413|ref|XP_003606991.1| Nascent polypeptide-associated complex subunit beta [Medicago truncatula] gi|355508046|gb|AES89188.1| Nascent polypeptide-associated complex subunit beta [Medicago truncatula]

 Score =  242 bits (617), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 118/135 (87%), Positives = 127/135 (94%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIP IEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 14  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVIQFLNPKVQASIAANT 73

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSGAPQTKKLQDILP II+QLGPDNL+NL+K+AEQFQKQAP AGTG+ T QE++DD+V
Sbjct: 74  WVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKIAEQFQKQAPEAGTGSATVQEENDDDV 133

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 134 PDLVPGETFETAAEE 148

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724395|ref|NP_001237824.1| uncharacterized protein LOC100500678 [Glycine max] gi|255630915|gb|ACU15820.1| unknown [Glycine max]

 Score =  239 bits (610), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 124/135 (91%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKD++VIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDEIVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II+QLGPDNL+NL+KLAEQFQKQ P AG GA   QEDDDD V
Sbjct: 82  WVVSGSPQTKKLQDILPNIIHQLGPDNLENLKKLAEQFQKQVPEAGDGATAAQEDDDDAV 141

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 142 PDLVPGETFETAAEE 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507122|gb|AFK41627.1| unknown [Lotus japonicus]

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 119/139 (85%), Positives = 127/139 (91%), Gaps = 1/139 (0%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPT-TQEDDDDE 130
           WVVSGAPQTKKLQDILP II+QLGPDNL+NL+KLAEQFQKQAP AG    T  QE++DD+
Sbjct: 82  WVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGAADSTAAQEENDDD 141

Query: 131 VPELVAGETFEAAAEEKTE 149
           VPELV GETFE  AEE+T+
Sbjct: 142 VPELVPGETFETVAEEETK 160

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074804|gb|ACJ85762.1| unknown [Medicago truncatula] gi|388518537|gb|AFK47330.1| unknown [Medicago truncatula]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 122/135 (90%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKT TTDDKRLQSTLKRIGVN IPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTATTDDKRLQSTLKRIGVNGIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II+QLGPDNL+NL+KLAEQFQKQAP AG  A   QEDDDD V
Sbjct: 82  WVVSGSPQTKKLQDILPNIIHQLGPDNLENLKKLAEQFQKQAPEAGADATAAQEDDDDAV 141

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 142 PDLVPGETFETAAEE 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850182|ref|XP_002892972.1| hypothetical protein ARALYDRAFT_312752 [Arabidopsis lyrata subsp. lyrata] gi|297338814|gb|EFH69231.1| hypothetical protein ARALYDRAFT_312752 [Arabidopsis lyrata subsp. lyrata]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/144 (81%), Positives = 129/144 (89%), Gaps = 1/144 (0%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIFKDDVVIQF+NPKVQASIAANT
Sbjct: 22  RRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIFKDDVVIQFINPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II+QLGPDN+DNL+KLAEQFQKQ+P  G  + T QE+DDD+V
Sbjct: 82  WVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQKQSPGEGKASATIQEEDDDDV 141

Query: 132 PELVAGETFEAAAEEKTEKPDAAS 155
           PELV GETFEAAAEEK     A+S
Sbjct: 142 PELV-GETFEAAAEEKLPAAAASS 164

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515145|gb|AFK45634.1| unknown [Lotus japonicus]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 1/139 (0%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPT-TQEDDDDE 130
           WVVSGAPQTKKLQDILP II+QLGPDNL+NL++LAEQFQKQAP AG    T  QE++DD+
Sbjct: 82  WVVSGAPQTKKLQDILPSIIHQLGPDNLENLKRLAEQFQKQAPEAGAADSTAAQEENDDD 141

Query: 131 VPELVAGETFEAAAEEKTE 149
           VPELV GETFE  AEE+T+
Sbjct: 142 VPELVPGETFETVAEEETK 160

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456969|ref|XP_003598765.1| Nascent polypeptide-associated complex subunit beta [Medicago truncatula] gi|355487813|gb|AES69016.1| Nascent polypeptide-associated complex subunit beta [Medicago truncatula]

 Score =  236 bits (602), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 122/135 (90%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKT TTDDKRLQSTLKRIGVN IPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 14  RRKKKAVHKTATTDDKRLQSTLKRIGVNGIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 73

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II+QLGPDNL+NL+KLAEQFQKQAP AG  A   QEDDDD V
Sbjct: 74  WVVSGSPQTKKLQDILPNIIHQLGPDNLENLKKLAEQFQKQAPEAGADATAAQEDDDDAV 133

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 134 PDLVPGETFETAAEE 148

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493890|gb|AFK35011.1| unknown [Lotus japonicus]

 Score =  236 bits (602), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/135 (87%), Positives = 123/135 (91%), Gaps = 3/135 (2%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II QLGPDNL+NL+KLAEQFQKQAP AG    T QE+DDD V
Sbjct: 82  WVVSGSPQTKKLQDILPSIIQQLGPDNLENLKKLAEQFQKQAPEAGA---TAQEEDDDAV 138

Query: 132 PELVAGETFEAAAEE 146
           P+LV GETFE AAEE
Sbjct: 139 PDLVPGETFETAAEE 153

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725517|ref|NP_001237607.1| uncharacterized protein LOC100500153 [Glycine max] gi|255629476|gb|ACU15084.1| unknown [Glycine max]

 Score =  234 bits (598), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 114/135 (84%), Positives = 123/135 (91%)

Query: 12  HRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 71
            RKKKA HKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT
Sbjct: 22  RRKKKAAHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANT 81

Query: 72  WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
           WVVSG+PQTKKLQDILP II+QLGPDNL+NL+KLAEQFQKQAP    G+ T QE++DD+V
Sbjct: 82  WVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGAAGSTTAQEENDDDV 141

Query: 132 PELVAGETFEAAAEE 146
           PELV G+ FE AAEE
Sbjct: 142 PELVPGQDFETAAEE 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
TAIR|locus:2197239	165	AT1G73230 "AT1G73230" [Arabido	0.793	0.745	0.870	1.7e-52
TAIR|locus:2030963	165	BTF3 "AT1G17880" [Arabidopsis	0.793	0.745	0.854	1.5e-51
UNIPROTKB|P20290	206	BTF3 "Transcription factor BTF	0.787	0.592	0.572	1.3e-31
UNIPROTKB|F2Z5H8	210	BTF3 "Uncharacterized protein"	0.787	0.580	0.572	1.3e-31
MGI|MGI:1202875	204	Btf3 "basic transcription fact	0.787	0.598	0.572	1.3e-31
RGD|1308095	162	Btf3 "basic transcription fact	0.787	0.753	0.572	1.3e-31
MGI|MGI:1915312	158	Btf3l4 "basic transcription fa	0.793	0.778	0.540	1.6e-31
ZFIN|ZDB-GENE-040426-1650	158	btf3l4 "basic transcription fa	0.787	0.772	0.576	2e-31
UNIPROTKB|Q56JY8	162	BTF3 "Btf3 protein" [Bos tauru	0.787	0.753	0.564	3.3e-31
UNIPROTKB|H9KYT4	156	LOC430910 "Uncharacterized pro	0.780	0.775	0.556	1.1e-30

TAIR|locus:2197239 AT1G73230 "AT1G73230" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 108/124 (87%), Positives = 115/124 (92%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTW 72
             RKKKAVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIFKDDVVIQF+NPKVQASIAANTW
Sbjct:    23 RKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIFKDDVVIQFINPKVQASIAANTW 82

Query:    73 VVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQE-DDDDEV 131
             VVSG PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQKQAP AG    T QE DDDD+V
Sbjct:    83 VVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQKQAPGAGDVPATIQEEDDDDDV 142

Query:   132 PELV 135
             P+LV
Sbjct:   143 PDLV 146

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IEP

TAIR|locus:2030963 BTF3 "AT1G17880" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 106/124 (85%), Positives = 114/124 (91%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTW 72
             RKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIFKDDVVIQF+NPKVQASIAANTW
Sbjct:    23 RKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIFKDDVVIQFINPKVQASIAANTW 82

Query:    73 VVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTT-QEDDDDEV 131
             VVSG+PQTKKLQDILP II+QLGPDN+DNL+KLAEQFQKQA   G  A  T QE+DDD+V
Sbjct:    83 VVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQKQASGEGNAASATIQEEDDDDV 142

Query:   132 PELV 135
             PELV
Sbjct:   143 PELV 146

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0009651 "response to salt stress" evidence=IEP

UNIPROTKB|P20290 BTF3 "Transcription factor BTF3" [Homo sapiens (taxid:9606)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/124 (57%), Positives = 93/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    72 RKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 131

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEV
Sbjct:   132 FTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEV 190

Query:   132 PELV 135
             P+LV
Sbjct:   191 PDLV 194

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F2Z5H8 BTF3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/124 (57%), Positives = 93/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    76 RKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 135

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEV
Sbjct:   136 FTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEV 194

Query:   132 PELV 135
             P+LV
Sbjct:   195 PDLV 198

GO:0001701 "in utero embryonic development" evidence=IEA

MGI|MGI:1202875 Btf3 "basic transcription factor 3" [Mus musculus (taxid:10090)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/124 (57%), Positives = 93/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    70 RKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 129

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEV
Sbjct:   130 FTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEV 188

Query:   132 PELV 135
             P+LV
Sbjct:   189 PDLV 192

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

RGD|1308095 Btf3 "basic transcription factor 3" [Rattus norvegicus (taxid:10116)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/124 (57%), Positives = 93/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    28 RKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 87

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEV
Sbjct:    88 FTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEV 146

Query:   132 PELV 135
             P+LV
Sbjct:   147 PDLV 150

GO:0001701 "in utero embryonic development" evidence=ISO

MGI|MGI:1915312 Btf3l4 "basic transcription factor 3-like 4" [Mus musculus (taxid:10090)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 67/124 (54%), Positives = 94/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT
Sbjct:    23 RKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANT 82

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+V
Sbjct:    83 FAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDV 142

Query:   132 PELV 135
             P+LV
Sbjct:   143 PDLV 146

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040426-1650 btf3l4 "basic transcription factor 3-like 4" [Danio rerio (taxid:7955)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 72/125 (57%), Positives = 94/125 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT
Sbjct:    23 RKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANT 82

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQA-PNAGTGAPTTQEDDDDE 130
             + ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF +Q   N    A    E+DDD 
Sbjct:    83 FAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNKAPKAEDIDEEDDD- 141

Query:   131 VPELV 135
             VP+LV
Sbjct:   142 VPDLV 146

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q56JY8 BTF3 "Btf3 protein" [Bos taurus (taxid:9913)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 70/124 (56%), Positives = 93/124 (75%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    28 RKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 87

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T E+DDDEV
Sbjct:    88 FTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEEDDDEV 146

Query:   132 PELV 135
             P+LV
Sbjct:   147 PDLV 150

GO:0001701 "in utero embryonic development" evidence=IEA

UNIPROTKB|H9KYT4 LOC430910 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 69/124 (55%), Positives = 91/124 (73%)

Query:    13 RKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANT 71
             RKKK VH+T T D+K+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT
Sbjct:    23 RKKKVVHRTATADEKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANT 82

Query:    72 WVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEV 131
             + ++G  +TK+L ++LP I+NQLG D+  +LR+LAE   KQ+ N    AP    DDDDEV
Sbjct:    83 FTITGHAETKQLTEMLPSILNQLGADSFSSLRRLAEALPKQSVNEK--APLATGDDDDEV 140

Query:   132 PELV 135
             P+LV
Sbjct:   141 PDLV 144

GO:0001701 "in utero embryonic development" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2U6N1	NACB_ASPOR	No assigned EC number	0.5149	0.8516	0.6734	yes	no
Q6FKD1	NACB_CANGA	No assigned EC number	0.3684	0.8193	0.8141	yes	no
Q02642	NACB1_YEAST	No assigned EC number	0.4135	0.8258	0.8152	yes	no
A6R5Z3	NACB_AJECN	No assigned EC number	0.5259	0.8580	0.8417	N/A	no
A2R091	NACB_ASPNC	No assigned EC number	0.5074	0.8516	0.8516	yes	no
Q1DI23	NACB_COCIM	No assigned EC number	0.5185	0.8516	0.8516	N/A	no
Q4WCX4	NACB_ASPFU	No assigned EC number	0.5074	0.8451	0.7043	yes	no
Q4KLF5	BT3L4_XENLA	No assigned EC number	0.5367	0.8645	0.8481	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh1_pm.C_scaffold_1001532	annotation not avaliable (164 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	fgenesh2_kg.7__123__AT4G39200.2	annotation not avaliable (107 aa)				•					0.562
	fgenesh2_kg.7__621__AT4G34670.1	annotation not avaliable (262 aa)				•			•		0.555
	fgenesh2_kg.3__456__AT3G04840.1	annotation not avaliable (262 aa)				•			•		0.550
	fgenesh2_kg.3__468__AT3G04920.1	annotation not avaliable (133 aa)				•					0.535
	fgenesh2_kg.2__971__AT1G67430.1	annotation not avaliable (175 aa)				•					0.534
	fgenesh2_kg.1__2897__AT1G27400.1	annotation not avaliable (176 aa)				•					0.532
	scaffold_602125.1	annotation not avaliable (220 aa)				•	•				0.530
	scaffold_602972.1	annotation not avaliable (133 aa)				•					0.526
	fgenesh2_kg.8__1848__AT5G59240.1	annotation not avaliable (210 aa)				•	•				0.525
	scaffold_703188.1	annotation not avaliable (105 aa)				•					0.511

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	155
pfam01849	50	pfam01849, NAC, NAC domain	2e-13

>gnl|CDD|202009 pfam01849, NAC, NAC domain

 Score = 60.2 bits (147), Expect = 2e-13
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 34 KRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKK 82
          K++G+  I  +EEV I K D  V+ F NPKVQ S  +NT+VV G  + K 
Sbjct: 1  KKLGLKPIEGVEEVTIRKKDGKVLVFNNPKVQKSPGSNTYVVFGEAKEKD 50

Length = 50

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	155
KOG2240	162	consensus RNA polymerase II general transcription	100.0
PF01849	58	NAC: NAC domain; InterPro: IPR002715 Nascent polyp	99.84
KOG2239	209	consensus Transcription factor containing NAC and	99.37
PRK06369	115	nac nascent polypeptide-associated complex protein	99.12
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	97.76
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	96.51

>KOG2240 consensus RNA polymerase II general transcription factor BTF3 and related proteins [Transcription]

Probab=100.00  E-value=2.9e-52  Score=331.31  Aligned_cols=145  Identities=57%  Similarity=0.862  Sum_probs=134.2

Q ss_pred             ccccccCCccccccccccCCCCcccHHHHHHHhhhCCccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEeccccc
Q 031690            2 VNSFLTLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQT   80 (155)
Q Consensus         2 ~~~~ggKGt~RRKkK~v~k~~~~DDKKLq~~LkKLg~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~   80 (155)
                      |+|||||||+|||++++|++++.||||||..|+||+|++|+||+||||||++ +||||++|+||+|+++|||+||||+++
T Consensus        17 ~~r~ggkGt~rrkk~~~~~~~~~ddkKlqs~lkkl~v~~i~~i~evn~~k~~g~Vihf~~~~vqasl~~nTf~ItG~~~~   96 (162)
T KOG2240|consen   17 VVRIGGKGTARRKKKVVHKTATADDKKLQSSLKKLGVNNIPGIEEVNMFKNDGTVIHFNNPKVQASLAANTFTITGHAET   96 (162)
T ss_pred             eeeecCCCccccccCCCCCCCCcccchhhhhhhhhccccccchhHhhhccccceeEecCCccccccccCCeEEEecCCcc
Confidence            7999999999999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             chhhhhhhhhhhccchhhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCcccCCCCCChhHHhhcccc
Q 031690           81 KKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTE  149 (155)
Q Consensus        81 K~l~ellP~Il~QLG~d~l~~L~~lae~~~~~~~~~~~~~~~~~~~ddddVPdLV~genFee~sk~e~~  149 (155)
                      |+|+||||+||+|||+++|++||+||++++.+.....+.. +....+||+||+||  |||+++++++++
T Consensus        97 k~l~EmlPsilsqLg~~sl~~Lr~La~~l~~~~~~~~~~~-~~~~~~dd~~p~Lv--enf~~~~~~~~~  162 (162)
T KOG2240|consen   97 KQLTEMLPSILSQLGPDSLTALRRLAEQLPKQDGKEGADA-ATIEDDDDDVPELV--ENFDEAAKNEAN  162 (162)
T ss_pred             cchhhhcchhhhhcChhhHHHHHHHHHhcccccccCCCCc-cchhhcccchHHHH--HhHHHHhhhccC
Confidence            9999999999999999999999999999988765555322 33345699999999  799999998763

>PF01849 NAC: NAC domain; InterPro: IPR002715 Nascent polypeptide-associated complex (NAC) is among the first ribosome-associated entities to bind the nascent polypeptide after peptide bond formation

Probab=99.84  E-value=1.4e-21  Score=131.17  Aligned_cols=57  Identities=49%  Similarity=0.750  Sum_probs=47.6

Q ss_pred             cHHHHHHHhhhCCccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccch
Q 031690           26 DKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKK   82 (155)
Q Consensus        26 DKKLq~~LkKLg~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~   82 (155)
                      |||+|.+|+|||+++|+||+||+|+++| ++|||+||+||+++++|||+|||++++++
T Consensus         1 ekk~~~~l~klgl~~i~~i~eV~i~~~dg~~~~~~~P~V~~~~~~~tyvV~G~~~~~~   58 (58)
T PF01849_consen    1 EKKLQKMLKKLGLKEIPGIEEVTIRKDDGTVFVFNNPEVQKSPGSNTYVVFGEAEEED   58 (58)
T ss_dssp             -------GHHCT-EEETTEEEEEEEETTTEEEEEESEEEEEETTCCEEEEESEEEEEE
T ss_pred             CHHHHHHHHHcCCcccCCcEEEEEEECCceEEEEcCCeEEEcCCCCEEEEEeeeEEcC
Confidence            6899999999999999999999999999 99999999999999999999999999864

The nascent polypeptide-associated complex (NAC) of yeast functions in the targeting process of ribosomes to the ER membrane []. NAC may prevent binding of ribosome nascent chains (RNCs) without a signal sequence to yeast membranes.; PDB: 3MCE_D 3MCB_A 3LKX_B 1TR8_B.

>KOG2239 consensus Transcription factor containing NAC and TS-N domains [Transcription]

Probab=99.37  E-value=4.9e-13  Score=110.18  Aligned_cols=62  Identities=19%  Similarity=0.463  Sum_probs=59.3

Q ss_pred             CcccHHHHHHHhhhCCccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccchhh
Q 031690           23 TTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQ   84 (155)
Q Consensus        23 ~~DDKKLq~~LkKLg~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~   84 (155)
                      +..+||.|.++.|||+++|+||.+|+|+|.. ..|.+++|.||.|++++||+|||.+...+++
T Consensus        63 srsekKark~m~KLGlk~v~gV~RVti~ksKNilfvI~kPdVyKsp~sdtYiiFGeakiedls  125 (209)
T KOG2239|consen   63 SRSEKKARKAMLKLGLKQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIIFGEAKIEDLS  125 (209)
T ss_pred             chHHHHHHHHHHhcCCccccceeEEEEEecccEEEEecCCceeccCCCceEEEecccccchhH
Confidence            5789999999999999999999999999998 9999999999999999999999999987776

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=99.12  E-value=1.2e-10  Score=88.87  Aligned_cols=60  Identities=25%  Similarity=0.506  Sum_probs=55.9

Q ss_pred             cccHHHHHHHhhhCCc--cCCCccceeeeecCEEEEeeCCeee--eeecCCeEEEecccccchhh
Q 031690           24 TDDKRLQSTLKRIGVN--AIPAIEEVNIFKDDVVIQFLNPKVQ--ASIAANTWVVSGAPQTKKLQ   84 (155)
Q Consensus        24 ~DDKKLq~~LkKLg~~--~I~gIeEVnmfk~d~vihF~nPkVq--aS~~aNT~vv~G~~e~K~l~   84 (155)
                      -+.||++.+++|||++  .| ||++|.|.+.+..|.|++|.|+  .++.++||+|+|.+++.+++
T Consensus         5 ~nprk~rkmmkkmGik~e~i-~v~~V~Ir~~~~~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~   68 (115)
T PRK06369          5 MNPRKMKQMMKQMGIDVEEL-DVEEVIIRLKDKEIVFENPQVTVMDAQGQKTYQIVGEPEEVEKE   68 (115)
T ss_pred             CCHHHHHHHHHHcCCcchhc-CeEEEEEEeCCEEEEEcCCeEEEEecCCCcEEEEEeccEEeecc
Confidence            4789999999999999  99 9999999999999999999999  79999999999999998654

>TIGR00264 alpha-NAC-related protein

Probab=97.76  E-value=6.9e-05  Score=57.52  Aligned_cols=57  Identities=35%  Similarity=0.557  Sum_probs=46.1

Q ss_pred             HHHHHHHhhhCCccC-CCccceeeeecCEEEEeeCCeeee--eecCCeEEEecccccchh
Q 031690           27 KRLQSTLKRIGVNAI-PAIEEVNIFKDDVVIQFLNPKVQA--SIAANTWVVSGAPQTKKL   83 (155)
Q Consensus        27 KKLq~~LkKLg~~~I-~gIeEVnmfk~d~vihF~nPkVqa--S~~aNT~vv~G~~e~K~l   83 (155)
                      |+++..|+++|++.. .+|+||.|.+++.-|.|++|.|+.  +...-||.|+|.++++.+
T Consensus        12 ~~mkkmMk~MGi~~~eidV~~ViIk~~~k~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~   71 (116)
T TIGR00264        12 KQMQKMMKQMGMEMEDLDVEEVIIVFDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKV   71 (116)
T ss_pred             HHHHHHHHHcCCCccccccEEEEEEeCCceEEEecCeeEEEecCCcEEEEEecccEEeec
Confidence            499999999997654 449999999988444499997754  567889999999998754

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=96.51  E-value=0.0036  Score=48.55  Aligned_cols=41  Identities=27%  Similarity=0.456  Sum_probs=36.4

Q ss_pred             cccHHHHHHHhhhC--CccCCCccceeeeecCEEEEeeCCeee
Q 031690           24 TDDKRLQSTLKRIG--VNAIPAIEEVNIFKDDVVIQFLNPKVQ   64 (155)
Q Consensus        24 ~DDKKLq~~LkKLg--~~~I~gIeEVnmfk~d~vihF~nPkVq   64 (155)
                      .+-++|+..++.||  +..|+||++|.|...|+.|.|++|.|+
T Consensus         6 mnpr~l~k~mkqmGi~~eeld~v~~V~i~~kd~e~vi~~P~V~   48 (122)
T COG1308           6 MNPRKLKKLMKQMGIDVEELDGVERVIIKLKDTEYVIENPQVT   48 (122)
T ss_pred             CCHHHHHHHHHHhCCCceeccCceEEEEEcCCceEEeeCCcEE
Confidence            46678889999997  999999999999999955999999987

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	155
3lkx_A	66	Human Nac Dimerization Domain Length = 66		8e-15
3mcb_B	58	Crystal Structure Of Nac Domains Of Human Nascent P		2e-12

>pdb|3LKX|A Chain A, Human Nac Dimerization Domain Length = 66

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 38  VNAIPAIEEVNIFKD-DVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGP 96
           VN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG 
Sbjct: 1   VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGA 60
Query: 97  DNLDNL 102
           D+L +L
Sbjct: 61  DSLTSL 66

>pdb|3MCB|B Chain B, Crystal Structure Of Nac Domains Of Human Nascent Polypeptide- Associated Complex (Nac) Length = 58

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 38 VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQL 94
          VN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQL
Sbjct: 1  VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQL 58

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	155
3lkx_A	66	Transcription factor BTF3; beta-barrel, chaperone;	9e-30
3mcb_B	58	Transcription factor BTF3; beta-barrel like struct	2e-25
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06

>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens} Length = 66

 Score =  102 bits (255), Expect = 9e-30
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)

Query: 38  VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGP 96
           VN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG 
Sbjct: 1   VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGA 60

Query: 97  DNLDNL 102
           D+L +L
Sbjct: 61  DSLTSL 66

>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} Length = 58

 Score = 91.4 bits (227), Expect = 2e-25
 Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 1/58 (1%)

Query: 38 VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQL 94
          VN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQL
Sbjct: 1  VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQL 58

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 30/161 (18%), Positives = 48/161 (29%), Gaps = 40/161 (24%)

Query: 23  TTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD----VVIQFL--------------NPKVQ 64
           TT  K++   L       I           D    +++++L              NP+  
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 65  ASIAA------NTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ---FQKQAPN 115
           + IA        TW         KL  I+   +N L P      RK+ ++   F   A  
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP---AEYRKMFDRLSVFPPSAH- 386

Query: 116 AGTGAPTTQ-----EDDDDEVPELVAGETFEAAAEEKTEKP 151
                PT        D       +V  +  + +  EK  K 
Sbjct: 387 ----IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	155
3lkx_A	66	Transcription factor BTF3; beta-barrel, chaperone;	100.0
3mcb_B	58	Transcription factor BTF3; beta-barrel like struct	99.97
3mce_A	61	Nascent polypeptide-associated complex subunit Al;	99.82
3mcb_A	54	Nascent polypeptide-associated complex subunit Al;	99.81
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	99.59

>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}

Probab=100.00  E-value=2.8e-35  Score=203.51  Aligned_cols=65  Identities=57%  Similarity=0.911  Sum_probs=62.3

Q ss_pred             CccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccchhhhhhhhhhhccchhhHHHH
Q 031690           38 VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNL  102 (155)
Q Consensus        38 ~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~ellP~Il~QLG~d~l~~L  102 (155)
                      |++|+||+||||||+| +||||+|||||+|+++|||||||++++|+|+||||+||+|||||+|++|
T Consensus         1 v~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~ellP~Il~qlG~d~l~~l   66 (66)
T 3lkx_A            1 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL   66 (66)
T ss_dssp             CEECCCEEEEEEEETTSEEEEEESCEEEEECC-CEEEEESCEEEEEGGGGTTGGGGGCCTTHHHHC
T ss_pred             CcccCCeeEEEEEecCCEEEEecCcceEEeeccCeeEecCCCEEeEHHHHChhhhhccChhhhhcC
Confidence            5789999999999999 9999999999999999999999999999999999999999999999875

>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=180.00  Aligned_cols=57  Identities=58%  Similarity=0.914  Sum_probs=55.8

Q ss_pred             CccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccchhhhhhhhhhhcc
Q 031690           38 VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQL   94 (155)
Q Consensus        38 ~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~ellP~Il~QL   94 (155)
                      +++|+||+||||||+| +||||+|||||||+++|||+|||++++|+|+||||+||+||
T Consensus         1 v~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNTfvv~G~~e~K~l~e~lP~Il~ql   58 (58)
T 3mcb_B            1 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQL   58 (58)
T ss_dssp             CCEECCCCEEEEEETTSEEEEEESCEEEEETTTTEEEEESCEEEEEGGGGTTGGGGGC
T ss_pred             CcccCCeeEEEEEecCCEEEEecCcceEEeeccceEEEecCCeeeEHHHHChhhhhcC
Confidence            5789999999999999 99999999999999999999999999999999999999997

>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens}

Probab=99.82  E-value=3.3e-21  Score=131.31  Aligned_cols=54  Identities=22%  Similarity=0.470  Sum_probs=48.9

Q ss_pred             HHHhhhCCccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccchhh
Q 031690           31 STLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQ   84 (155)
Q Consensus        31 ~~LkKLg~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~   84 (155)
                      ++|+|||+++|+||+||||||++ .+|||++|+||+|+++|||||||+++.++++
T Consensus         6 kal~KLglk~v~gI~rVtirK~~~~lf~i~~PdV~ksp~snTyvVFGeak~ed~~   60 (61)
T 3mce_A            6 PEFSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS   60 (61)
T ss_dssp             CCGGGTTCEECSSEEEEEEEETTTEEEEESSCEEEEC---CEEEEESCEEEECCC
T ss_pred             HHHHHcCCeECCCEEEEEEEecCCEEEEECCCcEEEcCCCCeEEEEcccccccCC
Confidence            56999999999999999999999 9999999999999999999999999999875

>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B

Probab=99.81  E-value=5.7e-21  Score=127.29  Aligned_cols=52  Identities=23%  Similarity=0.494  Sum_probs=50.1

Q ss_pred             HHhhhCCccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecccccchh
Q 031690           32 TLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKL   83 (155)
Q Consensus        32 ~LkKLg~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~~e~K~l   83 (155)
                      +|+|||+++||||+||||||++ .+|||++|+||+|+++|||||||+++.+++
T Consensus         1 al~KLglk~v~gI~rVti~K~~~~lf~i~~P~V~ksp~s~TyvVfGeak~ed~   53 (54)
T 3mcb_A            1 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDL   53 (54)
T ss_dssp             CGGGGTCEECTTEEEEEEESSSSEEEEESSCEEEECTTSSEEEEESCEEEEEC
T ss_pred             CccccCCEECCCEEEEEEEeCCCEEEEECCCcEEEcCCCCeEEEEcceeeccC
Confidence            4899999999999999999999 999999999999999999999999999876

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=99.59  E-value=4.8e-16  Score=114.82  Aligned_cols=53  Identities=30%  Similarity=0.473  Sum_probs=43.1

Q ss_pred             HHHhhhCC--ccCCCccceeeeecCEEEEeeCCeeee--eecCCeEEEecccccchh
Q 031690           31 STLKRIGV--NAIPAIEEVNIFKDDVVIQFLNPKVQA--SIAANTWVVSGAPQTKKL   83 (155)
Q Consensus        31 ~~LkKLg~--~~I~gIeEVnmfk~d~vihF~nPkVqa--S~~aNT~vv~G~~e~K~l   83 (155)
                      .+|+|||+  ++|+||+||+|+++|.+|||++|+||+  |+++|||+|||+++++++
T Consensus         2 k~lkKLGl~~~~I~gV~eV~i~k~d~~iv~~~P~V~~~~~~~~~Ty~I~Ge~~~~d~   58 (102)
T 1tr8_A            2 SHMKQMGMDMKDLRGVEEVVIKLKRKEIIIKNPKVNVMEFMGQKTYQVTGKARERSL   58 (102)
T ss_dssp             --------CCEEECCCCEEEEECSSEEEEEESCEEEEEEETTEEEEEEESCEEEEEE
T ss_pred             chHHHcCCCceeCCCcEEEEEEeCCEEEEECCCEEEEEcCCCCcEEEEEcCceeecc
Confidence            36999999  899999999999999999999999997  899999999999999876

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00