Citrus Sinensis ID: 031756

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MNNDNDFTFCKVEKNQSSDADGSVENQSSGFLWKQDELPSKTNKTVGFLSYNVIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHcccccEEEEEccEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccccccccccccccccEEEcccccccccccccccccEcccccccccccccccccccccccccccEcccccccHHHHHHHccccccccccccccccccccHHHHHHHcccccEEEEEccEEEEccccccccccccEEEEc
Coil and Loop (DISEMBL)
mnndndftfckveknqssdadgsvenqssgflwkqdelpsktnktvgFLSYNvidassssaagtsvkvasrkpasrakvpfekgysqvdwlrltqthpdlaglkgqsnkrLITMDEVKqhqsegsmWTVLKGRvynlspymkfhpggmaislc
Flexible Loop (DISEMBL)
MNNDNDFTFCKVeknqssdadgsvENQSSgflwkqdelpsktNKTVGFLSYNVIdassssaagtsvkvasrkpasrakvpfekgysqvDWLRLTQTHPDLAGLKGQSNKRLITMDEVkqhqsegsmwTVLKGRVYNLSPYmkfhpggmaislc
Low Complexity Region (SEG)
MNNDNDFTFCKVEKNQSSDADGSVENQSSGFLWKQDELPSKTNKTVGFLSYNVIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Disordered region (IsUnstruct)
********************************************TVGFLSYNVI****************************KGYSQVDWLRLTQTHPDL************************SMWTVLKGRVYNLSPYMKFHPG*******
Disordered Region (DISOPRED)
***DNDF********************************************************************************************************ITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Disordered Region (DISEMBL)
MNNDNDFTFCKVEK**************SGFLWKQDELPSKTNKTVGFLSYNVIDAS*******************AKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Disordered Region (DISPRO)
****NDFTFCKVEKN**************************************************************KVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNNDNDFTFCKVEKNQSSDADGSVENQSSGFLWKQDELPSKTNKTVGFLSYNVIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
Q502I6	527	Cytochrome b5 reductase 4	yes	no	0.581	0.168	0.447	7e-16
Q7L1T6	521	Cytochrome b5 reductase 4	yes	no	0.581	0.170	0.414	2e-15
Q32LH7	520	Cytochrome b5 reductase 4	yes	no	0.588	0.173	0.422	3e-15
Q3TDX8	528	Cytochrome b5 reductase 4	yes	no	0.581	0.168	0.404	3e-15
Q68EJ0	520	Cytochrome b5 reductase 4	yes	no	0.581	0.171	0.404	5e-15
Q28CZ9	523	Cytochrome b5 reductase 4	yes	no	0.444	0.130	0.486	9e-15
Q10352	147	Uncharacterized protein C	yes	no	0.555	0.578	0.288	4e-07
P08619	982	Nitrate reductase [NADPH]	N/A	no	0.261	0.040	0.5	2e-06
Q04772	201	Increased recombination c	yes	no	0.653	0.497	0.285	6e-06
P49100	137	Cytochrome b5 OS=Oryza sa	no	no	0.294	0.328	0.4	2e-05

>sp|Q502I6|NB5R4_DANRE Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 7/96 (7%)

Query: 54  IDASSSSAAGTSVKVASRKPA--SRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRL 111
           + + +  AAG+  +VA   PA  SR KV  + G+S +DW+RLT++  DL GL+G+  +  
Sbjct: 4   VPSQAFPAAGSQQRVA---PAGQSRNKVVLKPGHSLLDWIRLTKSGQDLTGLRGRLIE-- 58

Query: 112 ITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +T DE+K+H ++   WT ++G VYNLS YM FHPGG
Sbjct: 59  VTEDELKKHNTKKDCWTCIRGMVYNLSAYMDFHPGG 94

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway.
Danio rerio (taxid: 7955)
EC: 1EC: .EC: 6EC: .EC: 2EC: .EC: 2

>sp|Q7L1T6|NB5R4_HUMAN Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 5/94 (5%)

Query: 54  IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
           + + S  A  +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T
Sbjct: 4   VPSQSFPAPRSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VT 58

Query: 114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct: 59  EEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway. Plays a critical role in protecting pancreatic beta-cells against oxidant stress, possibly by protecting the cell from excess buildup of reactive oxygen species (ROS). Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and methemoglobin.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 2

EC: .

EC: 2

>sp|Q32LH7|NB5R4_BOVIN Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 7/97 (7%)

Query: 53  VIDASSSSAAGTSV--KVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKR 110
           +++  S S  G S   +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  + 
Sbjct: 1   MLNVPSQSFPGPSSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE- 56

Query: 111 LITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            +T +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct: 57  -VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway. Plays a critical role in protecting pancreatic beta-cells against oxidant stress, possibly by protecting the cell from excess buildup of reactive oxygen species (ROS).

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 6

EC: .

EC: 2

EC: .

EC: 2

>sp|Q3TDX8|NB5R4_MOUSE Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=3

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 5/94 (5%)

Query: 54  IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
           + + +  A G+  +V+S+    R+KVP ++G S +DW+RLT++  DL GLKG   +  +T
Sbjct: 4   VPSQAFPAPGSQQRVSSQ---GRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGGLIE--VT 58

Query: 114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct: 59  EEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGG 92

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway. Plays a critical role in protecting pancreatic beta-cells against oxidant stress, possibly by protecting the cell from excess buildup of reactive oxygen species (ROS).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 2

EC: .

EC: 2

>sp|Q68EJ0|NB5R4_RAT Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=Cyb5r4 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 5/94 (5%)

Query: 54  IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
           + + +  A G+  +VAS+    R+KVP ++G S +DW RLT++  D  GLKG   +  +T
Sbjct: 4   VPSQAFPAPGSQQRVASQ---GRSKVPLKQGRSLMDWFRLTKSGKDFTGLKGGLIE--VT 58

Query: 114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct: 59  EEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway. Plays a critical role in protecting pancreatic beta-cells against oxidant stress, possibly by protecting the cell from excess buildup of reactive oxygen species (ROS).

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 2

EC: .

EC: 2

>sp|Q28CZ9|NB5R4_XENTR Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 6/74 (8%)

Query: 76  RAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLI--TMDEVKQHQSEGSMWTVLKGR 133
           R+KVP + G S +DW+RLT++  DL GLKG    RLI  T +E+ QH  +   W  ++G 
Sbjct: 23  RSKVPLKPGRSLMDWIRLTKSGKDLTGLKG----RLIDVTEEELAQHNKKEDCWICIRGM 78

Query: 134 VYNLSPYMKFHPGG 147
           VYN++PYM++HPGG
Sbjct: 79  VYNITPYMEYHPGG 92

NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 6

EC: .

EC: 2

EC: .

EC: 2

>sp|Q10352|YDAA_SCHPO Uncharacterized protein C1F12.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.10c PE=3 SV=1

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 54/90 (60%), Gaps = 5/90 (5%)

Query: 60  SAAGTSVKVASRKPAS--RAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEV 117
           S A ++V+ + ++P    R K     G+SQ++W +L  +  +L+G++       +T +E+
Sbjct: 23  SPASSNVEHSEKQPRRDFRVKKYVAPGFSQLNWSKLVASGQNLSGVEKPIP---VTKEEL 79

Query: 118 KQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            +H+++   W  ++G+VYN+S Y+ +HP G
Sbjct: 80  AKHKTKEDCWIAIRGKVYNVSAYLPYHPAG 109

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P08619|NIA_NEUCR Nitrate reductase [NADPH] OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-3 PE=1 SV=3

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMA 149
           RLIT++E++QH  E   W V+ G+VYN +P+++ HPGG A
Sbjct: 618 RLITLEELRQHDGEEEPWFVVNGQVYNGTPFLEGHPGGAA 657

Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 1

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

>sp|Q04772|IRC21_YEAST Increased recombination centers protein 21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC21 PE=1 SV=1

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 40/140 (28%)

Query: 53  VIDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLT-------------QTHPD 99
           V   + SS     +  +SRKP  R K+  + G+S +DW  LT             Q   D
Sbjct: 27  VAHPAISSPLHMPMSKSSRKPLVRTKIRLDPGHSALDWHSLTSNPANYYTKFVSLQLIQD 86

Query: 100 L---------------AGLKGQSNKRLITMDE-----------VKQH-QSEGSMWTVLKG 132
           L               + LK Q   + I + +           VK+H + E  +W V+ G
Sbjct: 87  LLDDPVFQKDNFKFSPSQLKNQLLVQKIPLYKIMPPLRINRKIVKKHCKGEDELWCVING 146

Query: 133 RVYNLSPYMKFHPGGMAISL 152
           +VY++S Y+KFHPGG  I +
Sbjct: 147 KVYDISSYLKFHPGGTDILI 166

Involved in resistance to carboplatin and cisplatin. Is probably involved in a pathway contributing to genomic integrity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P49100|CYB5_ORYSJ Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 32/45 (71%)

Query: 108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           NK++ T++EV +H S+   W ++ G+VYN+S +++ HPGG  + L
Sbjct: 5   NKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLL 49

Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
224055123	229	predicted protein [Populus trichocarpa]	0.973	0.650	0.562	9e-49
297736295	226	unnamed protein product [Vitis vinifera]	0.967	0.654	0.564	7e-47
297811065	215	cytochrome b5 domain-containing protein	0.941	0.669	0.584	7e-45
356531661	215	PREDICTED: cytochrome b5 reductase 4-lik	0.967	0.688	0.548	1e-43
359487399	285	PREDICTED: uncharacterized protein LOC10	0.816	0.438	0.657	1e-43
9758996	275	unnamed protein product [Arabidopsis tha	0.954	0.530	0.558	2e-43
15242486	211	reduced lateral root formation protein [	0.954	0.691	0.558	3e-43
255645479	215	unknown [Glycine max]	0.967	0.688	0.542	1e-42
356542758	215	PREDICTED: cytochrome b5 reductase 4-lik	0.967	0.688	0.531	1e-42
255553510	227	flavohemoprotein B5/b5r, putative [Ricin	0.836	0.563	0.62	2e-42

>gi|224055123|ref|XP_002298420.1| predicted protein [Populus trichocarpa] gi|222845678|gb|EEE83225.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/192 (56%), Positives = 131/192 (68%), Gaps = 43/192 (22%)

Query: 1   MNNDNDFTFCKV----------EKNQSSD----------ADGSVENQSSGFLWKQDELPS 40
           M+NDNDFTFC+V           +N +SD          ++G+  +Q  G +W+ D LPS
Sbjct: 1   MDNDNDFTFCQVGLPVDKNELEAENLASDIGGIIIKDGFSNGTNSSQGGGVVWR-DSLPS 59

Query: 41  ----KTNKTVGFLSYNVIDASS------------SSAAGTSVK------VASRKPASRAK 78
               K  +TVG LS+NVIDAS+            S  AGTS K      V++RKP +R+K
Sbjct: 60  DADSKNERTVGSLSFNVIDASARGESSGVPRQVASGNAGTSAKNFDEKKVSARKPVARSK 119

Query: 79  VPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLS 138
           VPFEKGYSQ+DWL+LT+THPDLAGLKGQSNKRLI+MDEVK HQ+EGSMWTVLKGRVYNLS
Sbjct: 120 VPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISMDEVKLHQTEGSMWTVLKGRVYNLS 179

Query: 139 PYMKFHPGGMAI 150
           PY+KFHPGG  I
Sbjct: 180 PYLKFHPGGADI 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736295|emb|CBI24933.3| unnamed protein product [Vitis vinifera]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/186 (56%), Positives = 124/186 (66%), Gaps = 38/186 (20%)

Query: 1   MNNDNDFTFCKVEKNQSSDADGSVE--------------------NQSSGFLWKQDELPS 40
           M+NDNDFTFC+V  + + D   + E                    N + GFLWK     +
Sbjct: 1   MDNDNDFTFCQVGSSVNQDGFEAQELVPGIGGITINDEFSSEVVGNGNGGFLWKGKSPNN 60

Query: 41  KTNK--TVGFLSYNVIDASS------------SSAAGTSVKV----ASRKPASRAKVPFE 82
            T+K  TVG LS+ VID SS            +  AG+SVKV    A+RKP +RAKVPFE
Sbjct: 61  STSKEATVGSLSFKVIDTSSPKKSNELSRQAATKDAGSSVKVPQKSATRKPVARAKVPFE 120

Query: 83  KGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMK 142
           KGYSQ+DWL+LTQTHPDLAGL GQSNKRLI+M+EVKQH+ EGSMWTVLKGRVYNLSPYMK
Sbjct: 121 KGYSQMDWLKLTQTHPDLAGLNGQSNKRLISMNEVKQHRMEGSMWTVLKGRVYNLSPYMK 180

Query: 143 FHPGGM 148
           FHPGG+
Sbjct: 181 FHPGGV 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811065|ref|XP_002873416.1| cytochrome b5 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319253|gb|EFH49675.1| cytochrome b5 domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  185 bits (469), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 119/166 (71%), Gaps = 22/166 (13%)

Query: 3   NDNDFTFCKVE----------KNQSSDADGSV------ENQSSGFLWKQDELPSKTNKTV 46
           +D+DFTF KV           K  +SD  GS+      + QS+G +WK   LP K  +TV
Sbjct: 6   DDDDFTFSKVAPPDSEAVLEAKALASDV-GSITLKDALDQQSNGLIWKDKSLPPK-EETV 63

Query: 47  GFLSYNVIDASS----SSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAG 102
           G LS+NVID+SS    S+ +  + K  +RKP +R KVPFEKGYSQ+DWL+LT+THPDLAG
Sbjct: 64  GSLSFNVIDSSSLKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRTHPDLAG 123

Query: 103 LKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           LKG+SNKRLI MDEVK+HQS  SMWTVLKGRVYN+SPYM FHPGG+
Sbjct: 124 LKGESNKRLIPMDEVKKHQSGDSMWTVLKGRVYNISPYMNFHPGGV 169

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531661|ref|XP_003534395.1| PREDICTED: cytochrome b5 reductase 4-like [Glycine max]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/175 (54%), Positives = 119/175 (68%), Gaps = 27/175 (15%)

Query: 1   MNNDNDFTFCKV------EKNQ--SSDADGSVENQSSGFL-WKQDE-LPSKTNKTVGFLS 50
           M+ D+DFTFC+V      E N+  S  AD S+E +SS      QD  LP++   TVG LS
Sbjct: 1   MDTDDDFTFCQVSAPVDLETNKLASDIADISIEEESSNATNTTQDSALPNQKEATVGSLS 60

Query: 51  YNVIDASSSSAAGTSVKVAS-----------------RKPASRAKVPFEKGYSQVDWLRL 93
           + V   +SS  + ++ K+                   +KP  RAKVPFEKGYSQ+DWL+L
Sbjct: 61  FTVTSTASSRPSESTTKLVPAQANNSSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKL 120

Query: 94  TQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           TQTHPDLAGLKGQSNKRLI+MDEV++HQ+EG MWTVLKGRVYN+SPYMKFHPGG+
Sbjct: 121 TQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGV 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487399|ref|XP_002273562.2| PREDICTED: uncharacterized protein LOC100261983 [Vitis vinifera]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/143 (65%), Positives = 108/143 (75%), Gaps = 18/143 (12%)

Query: 24  VENQSSGFLWKQDELPSKTNK--TVGFLSYNVIDASS------------SSAAGTSVKV- 68
           V N + GFLWK     + T+K  TVG LS+ VID SS            +  AG+SVKV 
Sbjct: 103 VGNGNGGFLWKGKSPNNSTSKEATVGSLSFKVIDTSSPKKSNELSRQAATKDAGSSVKVP 162

Query: 69  ---ASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGS 125
              A+RKP +RAKVPFEKGYSQ+DWL+LTQTHPDLAGL GQSNKRLI+M+EVKQH+ EGS
Sbjct: 163 QKSATRKPVARAKVPFEKGYSQMDWLKLTQTHPDLAGLNGQSNKRLISMNEVKQHRMEGS 222

Query: 126 MWTVLKGRVYNLSPYMKFHPGGM 148
           MWTVLKGRVYNLSPYMKFHPGG+
Sbjct: 223 MWTVLKGRVYNLSPYMKFHPGGV 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758996|dbj|BAB09523.1| unnamed protein product [Arabidopsis thaliana]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/163 (55%), Positives = 117/163 (71%), Gaps = 17/163 (10%)

Query: 2   NNDNDFTFCKVE------KNQSSDA------DGSVENQSSGFLWKQDELPSKTNKTVGFL 49
           + D+DFTF KV       K+ +SD       DG  + +S+G +WK   LP K  +T+G L
Sbjct: 68  SRDDDFTFSKVSPPDSEVKDLASDVGSITLKDGLDQQKSNGLIWKDKSLPPK-EETIGSL 126

Query: 50  SYNVIDASSS----SAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKG 105
           S+ V D+SSS    + +  + K  +RKP +R KVPFEKGYSQ+DWL+LT+THPDLAGLKG
Sbjct: 127 SFTVTDSSSSKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRTHPDLAGLKG 186

Query: 106 QSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           +SNKRLI MDEVK+H++  SMWTVLKGRVYN+SPYM FHPGG+
Sbjct: 187 ESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGV 229

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242486|ref|NP_196530.1| reduced lateral root formation protein [Arabidopsis thaliana] gi|79327401|ref|NP_001031861.1| reduced lateral root formation protein [Arabidopsis thaliana] gi|7671421|emb|CAB89362.1| putative protein [Arabidopsis thaliana] gi|34146794|gb|AAQ62405.1| At5g09680 [Arabidopsis thaliana] gi|51968362|dbj|BAD42873.1| unknown protein [Arabidopsis thaliana] gi|51969432|dbj|BAD43408.1| unknown protein [Arabidopsis thaliana] gi|332004046|gb|AED91429.1| reduced lateral root formation protein [Arabidopsis thaliana] gi|332004047|gb|AED91430.1| reduced lateral root formation protein [Arabidopsis thaliana]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/163 (55%), Positives = 117/163 (71%), Gaps = 17/163 (10%)

Query: 4   DNDFTFCKVE------KNQSSDA------DGSVENQSSGFLWKQDELPSKTNKTVGFLSY 51
           D+DFTF KV       K+ +SD       DG  + +S+G +WK   LP K  +T+G LS+
Sbjct: 6   DDDFTFSKVSPPDSEVKDLASDVGSITLKDGLDQQKSNGLIWKDKSLPPK-EETIGSLSF 64

Query: 52  NVIDASSS----SAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQS 107
            V D+SSS    + +  + K  +RKP +R KVPFEKGYSQ+DWL+LT+THPDLAGLKG+S
Sbjct: 65  TVTDSSSSKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRTHPDLAGLKGES 124

Query: 108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           NKRLI MDEVK+H++  SMWTVLKGRVYN+SPYM FHPGG+ +
Sbjct: 125 NKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDM 167

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645479|gb|ACU23235.1| unknown [Glycine max]

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/175 (54%), Positives = 118/175 (67%), Gaps = 27/175 (15%)

Query: 1   MNNDNDFTFCKV------EKNQ--SSDADGSVENQSSGFL-WKQDE-LPSKTNKTVGFLS 50
           M+ D+DFTFC+V      E N+  S  AD S+E +SS      QD  LP++   TVG LS
Sbjct: 1   MDTDDDFTFCQVSAPVGLETNKLASDIADISIEEESSNATNTTQDSALPNQKEATVGSLS 60

Query: 51  YNVIDASSSSAAGTSVKVAS-----------------RKPASRAKVPFEKGYSQVDWLRL 93
           + V   +SS  + ++ K+                   +KP  RAKVPFEKGYSQ+DWL+L
Sbjct: 61  FTVTSTASSRPSESTTKLVPAQANNSSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKL 120

Query: 94  TQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           TQTHPDLAGLKGQS KRLI+MDEV++HQ+EG MWTVLKGRVYN+SPYMKFHPGG+
Sbjct: 121 TQTHPDLAGLKGQSYKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGV 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542758|ref|XP_003539832.1| PREDICTED: cytochrome b5 reductase 4-like [Glycine max]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 118/175 (67%), Gaps = 27/175 (15%)

Query: 1   MNNDNDFTFCKV------EKNQ--SSDADGSVENQSSGF--LWKQDELPSKTNKTVGFLS 50
           M+ D+DFTFC+V      E N+  S  AD S++ +SS      + + LP++   TVG LS
Sbjct: 1   MDIDDDFTFCQVSAPVDVETNKLASDIADISIKEESSNASNTAQDNALPNQKEATVGSLS 60

Query: 51  YNVIDASSSSAAGTSVKVAS-----------------RKPASRAKVPFEKGYSQVDWLRL 93
           + V   +SS    ++ K+                   +KP  RAKVPFEKGYSQ+DWL+L
Sbjct: 61  FTVTSTASSRPNESTTKLVPTQANISSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKL 120

Query: 94  TQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           TQTHPDLAGLKGQSNKRLI+MDEV++HQ+EG MWTVLKGRVYN+SPYMKFHPGG+
Sbjct: 121 TQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGV 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553510|ref|XP_002517796.1| flavohemoprotein B5/b5r, putative [Ricinus communis] gi|223543068|gb|EEF44603.1| flavohemoprotein B5/b5r, putative [Ricinus communis]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 111/150 (74%), Gaps = 22/150 (14%)

Query: 20  ADGSVENQSSGFLWKQDELPSKTN---KTVGFLSYNVIDASS------------SSAAGT 64
           ++G  ++QSS  LWK D LP+  N   +TVG LS+NVIDA+S            S   GT
Sbjct: 39  SNGISDSQSSSILWK-DGLPNSANSKEETVGSLSFNVIDAASFKRPSDLSGQVASPDTGT 97

Query: 65  SV------KVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVK 118
            V      K +++KPA RAKVPFEKGYSQ+DWL+LT+THPDLAGL GQSNKR I+M+EVK
Sbjct: 98  KVTSLKEQKASTKKPAPRAKVPFEKGYSQMDWLKLTRTHPDLAGLNGQSNKRRISMNEVK 157

Query: 119 QHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
           QH+ EGSMWTVLKGRVYNLSPYMKFHPGG+
Sbjct: 158 QHRIEGSMWTVLKGRVYNLSPYMKFHPGGV 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2144811	211	RLF "reduced lateral root form	0.954	0.691	0.558	2.5e-42
UNIPROTKB|I3LV78	264	LOC100622980 "Uncharacterized	0.686	0.397	0.375	4.7e-16
ZFIN|ZDB-GENE-050522-225	527	cyb5r4 "cytochrome b5 reductas	0.581	0.168	0.447	1e-15
UNIPROTKB|Q5ZM68	130	CYB5R4 "Uncharacterized protei	0.535	0.630	0.425	2.6e-15
UNIPROTKB|F1MB85	520	CYB5R4 "Cytochrome b5 reductas	0.588	0.173	0.422	3.5e-15
UNIPROTKB|Q32LH7	520	CYB5R4 "Cytochrome b5 reductas	0.588	0.173	0.422	3.5e-15
UNIPROTKB|Q7L1T6	521	CYB5R4 "Cytochrome b5 reductas	0.581	0.170	0.414	3.5e-15
UNIPROTKB|E2R102	519	CYB5R4 "Uncharacterized protei	0.581	0.171	0.404	4.5e-15
MGI|MGI:2386848	528	Cyb5r4 "cytochrome b5 reductas	0.581	0.168	0.404	4.7e-15
RGD|621834	520	Cyb5r4 "cytochrome b5 reductas	0.581	0.171	0.404	7.4e-15

TAIR|locus:2144811 RLF "reduced lateral root formation" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 91/163 (55%), Positives = 117/163 (71%)

Query:     2 NNDNDFTFCKVE------KNQSSDA------DGSVENQSSGFLWKQDELPSKTNKTVGFL 49
             + D+DFTF KV       K+ +SD       DG  + +S+G +WK   LP K  +T+G L
Sbjct:     4 SRDDDFTFSKVSPPDSEVKDLASDVGSITLKDGLDQQKSNGLIWKDKSLPPK-EETIGSL 62

Query:    50 SYNVIDASSS----SAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKG 105
             S+ V D+SSS    + +  + K  +RKP +R KVPFEKGYSQ+DWL+LT+THPDLAGLKG
Sbjct:    63 SFTVTDSSSSKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRTHPDLAGLKG 122

Query:   106 QSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGM 148
             +SNKRLI MDEVK+H++  SMWTVLKGRVYN+SPYM FHPGG+
Sbjct:   123 ESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGV 165

GO:0005634 "nucleus" evidence=ISM

GO:0020037 "heme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010311 "lateral root formation" evidence=IMP

UNIPROTKB|I3LV78 LOC100622980 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query:    38 LPSKTNKTVGFLSYNVIDASSSSAAG--TSVKVASRKPASRAKVPFEKGYSQVDWLRLTQ 95
             LP+  ++        +++  S S  G  +  +VAS     R+KVP ++G S +DW+RLT+
Sbjct:     4 LPAMDSRQGAGQGSRMLNVPSQSFPGPRSQQRVAS---GGRSKVPLKQGRSLMDWIRLTK 60

Query:    96 THPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
             +  DL GLKG+  +  +T +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    61 SGKDLTGLKGRLIE--VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 110

GO:0046872 "metal ion binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

ZFIN|ZDB-GENE-050522-225 cyb5r4 "cytochrome b5 reductase 4" [Danio rerio (taxid:7955)]

 Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
 Identities = 43/96 (44%), Positives = 64/96 (66%)

Query:    54 IDASSSSAAGTSVKVASRKPA--SRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRL 111
             + + +  AAG+  +VA   PA  SR KV  + G+S +DW+RLT++  DL GL+G+  +  
Sbjct:     4 VPSQAFPAAGSQQRVA---PAGQSRNKVVLKPGHSLLDWIRLTKSGQDLTGLRGRLIE-- 58

Query:   112 ITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
             +T DE+K+H ++   WT ++G VYNLS YM FHPGG
Sbjct:    59 VTEDELKKHNTKKDCWTCIRGMVYNLSAYMDFHPGG 94

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q5ZM68 CYB5R4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 37/87 (42%), Positives = 57/87 (65%)

Query:    61 AAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQH 120
             A G+  +VA+     R KVP + G S +DW+RLT++  DL GLKG+  +  +T DE+ +H
Sbjct:    11 APGSQQRVAA---GGRTKVPLKPGRSLMDWIRLTKSGKDLTGLKGRLIE--VTEDELAKH 65

Query:   121 QSEGSMWTVLKGRVYNLSPYMKFHPGG 147
               +   W  ++G VYN++PYM++HPGG
Sbjct:    66 NKKEDCWICIRGLVYNVTPYMEYHPGG 92

GO:0020037 "heme binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1MB85 CYB5R4 "Cytochrome b5 reductase 4" [Bos taurus (taxid:9913)]

 Score = 200 (75.5 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 41/97 (42%), Positives = 64/97 (65%)

Query:    53 VIDASSSSAAGTSV--KVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKR 110
             +++  S S  G S   +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  + 
Sbjct:     1 MLNVPSQSFPGPSSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE- 56

Query:   111 LITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +T +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    57 -VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0048468 "cell development" evidence=IEA

GO:0046677 "response to antibiotic" evidence=IEA

GO:0042593 "glucose homeostasis" evidence=IEA

GO:0030073 "insulin secretion" evidence=IEA

GO:0016174 "NAD(P)H oxidase activity" evidence=IEA

GO:0006801 "superoxide metabolic process" evidence=IEA

GO:0006091 "generation of precursor metabolites and energy" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|Q32LH7 CYB5R4 "Cytochrome b5 reductase 4" [Bos taurus (taxid:9913)]

 Score = 200 (75.5 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 41/97 (42%), Positives = 64/97 (65%)

Query:    53 VIDASSSSAAGTSV--KVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKR 110
             +++  S S  G S   +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  + 
Sbjct:     1 MLNVPSQSFPGPSSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE- 56

Query:   111 LITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +T +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    57 -VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|Q7L1T6 CYB5R4 "Cytochrome b5 reductase 4" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 39/94 (41%), Positives = 62/94 (65%)

Query:    54 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
             + + S  A  +  +VAS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T
Sbjct:     4 VPSQSFPAPRSQQRVAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VT 58

Query:   114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    59 EEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

GO:0020037 "heme binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0003032 "detection of oxygen" evidence=NAS

GO:0006091 "generation of precursor metabolites and energy" evidence=IDA

GO:0006801 "superoxide metabolic process" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IDA

GO:0016174 "NAD(P)H oxidase activity" evidence=IDA

GO:0030073 "insulin secretion" evidence=ISS

GO:0042593 "glucose homeostasis" evidence=ISS

GO:0046677 "response to antibiotic" evidence=ISS

GO:0048468 "cell development" evidence=ISS

GO:0016653 "oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|E2R102 CYB5R4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 199 (75.1 bits), Expect = 4.5e-15, P = 4.5e-15
 Identities = 38/94 (40%), Positives = 62/94 (65%)

Query:    54 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
             + + S  A  +  + AS     R+KVP ++G S +DW+RLT++  DL GLKG+  +  +T
Sbjct:     4 VPSQSFPAPSSQQRAAS---GGRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGRLIE--VT 58

Query:   114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +E+K+H ++   W  ++G VYN+SPYM++HPGG
Sbjct:    59 EEELKRHNTKDDCWICIRGFVYNVSPYMEYHPGG 92

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0048468 "cell development" evidence=IEA

GO:0046677 "response to antibiotic" evidence=IEA

GO:0042593 "glucose homeostasis" evidence=IEA

GO:0030073 "insulin secretion" evidence=IEA

GO:0016174 "NAD(P)H oxidase activity" evidence=IEA

GO:0006801 "superoxide metabolic process" evidence=IEA

GO:0006091 "generation of precursor metabolites and energy" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

MGI|MGI:2386848 Cyb5r4 "cytochrome b5 reductase 4" [Mus musculus (taxid:10090)]

 Score = 199 (75.1 bits), Expect = 4.7e-15, P = 4.7e-15
 Identities = 38/94 (40%), Positives = 63/94 (67%)

Query:    54 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
             + + +  A G+  +V+S+    R+KVP ++G S +DW+RLT++  DL GLKG   +  +T
Sbjct:     4 VPSQAFPAPGSQQRVSSQ---GRSKVPLKQGRSLMDWIRLTKSGKDLTGLKGGLIE--VT 58

Query:   114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    59 EEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGG 92

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=ISO

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=ISO;ISA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISA

GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA

GO:0006091 "generation of precursor metabolites and energy" evidence=ISO

GO:0006739 "NADP metabolic process" evidence=ISO

GO:0006801 "superoxide metabolic process" evidence=ISO

GO:0016174 "NAD(P)H oxidase activity" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016653 "oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor" evidence=ISO

GO:0020037 "heme binding" evidence=ISO;ISA

GO:0030073 "insulin secretion" evidence=IMP

GO:0042168 "heme metabolic process" evidence=ISA

GO:0042593 "glucose homeostasis" evidence=IMP

GO:0046677 "response to antibiotic" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048468 "cell development" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO;ISA;IDA

RGD|621834 Cyb5r4 "cytochrome b5 reductase 4" [Rattus norvegicus (taxid:10116)]

 Score = 197 (74.4 bits), Expect = 7.4e-15, P = 7.4e-15
 Identities = 38/94 (40%), Positives = 61/94 (64%)

Query:    54 IDASSSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLIT 113
             + + +  A G+  +VAS+    R+KVP ++G S +DW RLT++  D  GLKG   +  +T
Sbjct:     4 VPSQAFPAPGSQQRVASQ---GRSKVPLKQGRSLMDWFRLTKSGKDFTGLKGGLIE--VT 58

Query:   114 MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
              +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct:    59 EEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 92

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IDA

GO:0004128 "cytochrome-b5 reductase activity, acting on NAD(P)H" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0006091 "generation of precursor metabolites and energy" evidence=IEA;ISO

GO:0006739 "NADP metabolic process" evidence=IDA

GO:0006801 "superoxide metabolic process" evidence=IEA;ISO

GO:0016174 "NAD(P)H oxidase activity" evidence=IEA;ISO

GO:0016653 "oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor" evidence=ISO

GO:0020037 "heme binding" evidence=IEA;IMP

GO:0030073 "insulin secretion" evidence=IEA;ISO

GO:0042593 "glucose homeostasis" evidence=IEA;ISO

GO:0046677 "response to antibiotic" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048468 "cell development" evidence=IEA;ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA;ISO

GO:0050660 "flavin adenine dinucleotide binding" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	153
pfam00173	74	pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid	3e-14
PLN02252	888	PLN02252, PLN02252, nitrate reductase [NADPH]	4e-11
COG5274	164	COG5274, CYB5, Cytochrome b involved in lipid meta	5e-10
PLN03198	526	PLN03198, PLN03198, delta6-acyl-lipid desaturase;	0.003

>gnl|CDD|201057 pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain

 Score = 63.0 bits (154), Expect = 3e-14
 Identities = 16/36 (44%), Positives = 27/36 (75%)

Query: 112 ITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
            T++EVK+H  +G  W V+ G+VY+++ ++K HPGG
Sbjct: 1   FTLEEVKKHNKDGDCWIVINGKVYDVTRFLKDHPGG 36

This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases. Length = 74

>gnl|CDD|215141 PLN02252, PLN02252, nitrate reductase [NADPH]

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 107 SNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +  +  TM EV++H SE S W V+ G VY+ + ++K HPGG
Sbjct: 515 TGSKQYTMSEVRKHNSEDSCWIVVHGHVYDCTRFLKDHPGG 555

Length = 888

>gnl|CDD|227599 COG5274, CYB5, Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism]

 Score = 54.4 bits (131), Expect = 5e-10
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 58  SSSAAGTSVKVASRKPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEV 117
            +S       + S  P    K+   K ++ +DW  L Q H D+       + + IT +EV
Sbjct: 1   MASKTSEKCVILSDGPKYTNKLYAGKDHAALDWDSLVQEHADILN---DESPKPITAEEV 57

Query: 118 KQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
            +H      W V+ G+VY++S ++  HPGG  I  
Sbjct: 58  AKHNKSEDCWIVINGKVYDVSQFLDEHPGGEDIIK 92

Length = 164

>gnl|CDD|178739 PLN03198, PLN03198, delta6-acyl-lipid desaturase; Provisional

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 27/96 (28%)

Query: 58  SSSAAGTSVKVASR--KPASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMD 115
           +S++   +  +A    KP  R     +K          +++H                + 
Sbjct: 75  NSNSQEAAEALAESVVKPTRRRSSKEKK----------SKSHL---------------LS 109

Query: 116 EVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAIS 151
           EV  H      W V+K +VY++S +   HPGG  IS
Sbjct: 110 EVAAHNKPNDCWIVIKNKVYDVSDFAAEHPGGSVIS 145

Length = 526

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG0536	145	consensus Flavohemoprotein b5+b5R [Energy producti	99.94
KOG0537	124	consensus Cytochrome b5 [Energy production and con	99.66
COG5274	164	CYB5 Cytochrome b involved in lipid metabolism [En	99.62
PLN02252	888	nitrate reductase [NADPH]	99.48
PF00173	76	Cyt-b5: Cytochrome b5-like Heme/Steroid binding do	99.47
PLN03198	526	delta6-acyl-lipid desaturase; Provisional	99.19
PLN03199	485	delta6-acyl-lipid desaturase-like protein; Provisi	99.13
KOG4576	167	consensus Sulfite oxidase, heme-binding component	98.77
COG4892	81	Predicted heme/steroid binding protein [General fu	97.5
KOG1110	183	consensus Putative steroid membrane receptor Hpr6.	96.8
PF14901	94	Jiv90: Cleavage inducing molecular chaperone	84.3
KOG1108	281	consensus Predicted heme/steroid binding protein [	83.06

>KOG0536 consensus Flavohemoprotein b5+b5R [Energy production and conversion]

Probab=99.94  E-value=1.8e-27  Score=185.24  Aligned_cols=77  Identities=38%  Similarity=0.775  Sum_probs=71.4

Q ss_pred             CccccccCCCCcChhhHHHhhcCCCCccCCcCCCCCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCcccccC
Q 031756           74 ASRAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC  153 (153)
Q Consensus        74 ~~r~KvpL~pG~S~ldW~rL~~s~~~L~g~~~~~~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl~  153 (153)
                      ..|.|++|.||+++|||.+|+.++++|+|..   .+..+|.+||++|++.+||||+|+|+|||||+||+|||||.++||+
T Consensus        35 r~R~K~~l~PG~s~mdW~rL~~s~~~lag~~---~~i~vt~~El~KH~~~dDcW~~i~G~VYnVt~Yl~fHPgG~d~lmk  111 (145)
T KOG0536|consen   35 RKRTKVALAPGHSQMDWSRLTASGKNLAGVE---SPIPVTAEELKKHNKKDDCWIAIRGKVYNVTAYLDFHPGGVDELMK  111 (145)
T ss_pred             cccceeecCCCcchhhHHHHhccCccccccc---CCCccCHHHHHhhCCccceEEEEcCEEEecccccccCCCCHHHHHH
Confidence            3399999999999999999999999999874   4567999999999999999999999999999999999999998874

>KOG0537 consensus Cytochrome b5 [Energy production and conversion]

Probab=99.66  E-value=2.5e-17  Score=125.87  Aligned_cols=45  Identities=29%  Similarity=0.738  Sum_probs=42.4

Q ss_pred             CcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCcccccC
Q 031756          109 KRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC  153 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl~  153 (153)
                      .+.|+.+||++||+.+||||+|+|+|||||+|+++||||.++|++
T Consensus         4 ~k~~~~~EV~kHn~~~d~Wvii~gkVYDvT~Fl~eHPGG~~vLl~   48 (124)
T KOG0537|consen    4 LKYYTLSEVAKHNKKDDCWVIIHGKVYDVTSFLDEHPGGEDVLLE   48 (124)
T ss_pred             cccccHHHHHhhcCCCCeEEEECCEEEeccchhhhCCChHHHHHH
Confidence            578999999999999999999999999999999999999988863

>COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism]

Probab=99.62  E-value=6.6e-16  Score=123.51  Aligned_cols=74  Identities=32%  Similarity=0.595  Sum_probs=67.4

Q ss_pred             cccccCCCCcChhhHHHhhcCCCCccCCcCCCCCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756           76 RAKVPFEKGYSQVDWLRLTQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus        76 r~KvpL~pG~S~ldW~rL~~s~~~L~g~~~~~~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ++++.+.|++..++|.-+.....+|.+.   +....++.+||.+|++.+||||+|+|+|||||.|+++||||+++|+
T Consensus        19 ~~~~~~~~d~~~~~~~~~~~~~~di~~~---~~~~~~~~eev~~h~~~~d~~ivi~g~VyDvs~fl~~HPGGe~ii~   92 (164)
T COG5274          19 TNKLYAGKDHAALDWDSLVQEHADILND---ESPKPITAEEVAKHNKSEDCWIVINGKVYDVSQFLDEHPGGEDIIK   92 (164)
T ss_pred             ceeeecCccHHHHhHHHhhcchhhhccC---CccccccHHHHHHhcCccceEEEEcCEEEEhhhccccCCCcceeeh
Confidence            9999999999999999998887777543   2456799999999999999999999999999999999999999986

>PLN02252 nitrate reductase [NADPH]

Probab=99.48  E-value=2.2e-14  Score=137.60  Aligned_cols=83  Identities=28%  Similarity=0.504  Sum_probs=65.5

Q ss_pred             CCCCCccccccCCCCcChhhHHHhhcCCCC-------ccC------CcCCCCCcccCHHHHHhhcCCCCeEEEEcCeEee
Q 031756           70 SRKPASRAKVPFEKGYSQVDWLRLTQTHPD-------LAG------LKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYN  136 (153)
Q Consensus        70 ~~~p~~r~KvpL~pG~S~ldW~rL~~s~~~-------L~g------~~~~~~~~~it~eEv~kHn~~~d~WivI~GkVYD  136 (153)
                      ......||+||++||...++||+..+....       +..      ++.....+.|+++||++|++.++|||+|+|+|||
T Consensus       465 ~~~~~~~f~hp~~~~~~~ggwm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ev~~h~~~~~~Wivi~g~VYD  544 (888)
T PLN02252        465 KGEIGLVFEHPTQPGNQSGGWMAKQKHLETASAAAPALKKSVSTPFMNTNTGSKQYTMSEVRKHNSEDSCWIVVHGHVYD  544 (888)
T ss_pred             CCcceEEEeCCCCccCCCCCcchhhhhcccccccccccccccCCcccCCccccceeCHHHHHhhCcCCCeEEEECCEEEe
Confidence            345678999999999999999986433211       100      0011134789999999999999999999999999


Q ss_pred             cCcccccCCCCccccc
Q 031756          137 LSPYMKFHPGGMAISL  152 (153)
Q Consensus       137 VT~Fl~~HPGG~~iLl  152 (153)
                      +|+|+..||||.++|+
T Consensus       545 vT~fl~~HPGG~~~I~  560 (888)
T PLN02252        545 CTRFLKDHPGGADSIL  560 (888)
T ss_pred             CHHHHHHCCChHHHHH
Confidence            9999999999998775

>PF00173 Cyt-b5: Cytochrome b5-like Heme/Steroid binding domain This prints entry is a subset of the Pfam entry; InterPro: IPR001199 Cytochromes b5 are ubiquitous electron transport proteins found in animals, plants and yeasts []

Probab=99.47  E-value=1.8e-14  Score=97.80  Aligned_cols=42  Identities=31%  Similarity=0.815  Sum_probs=38.8

Q ss_pred             ccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          111 LITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       111 ~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .||++||++|+..++|||+|+|+|||||+|+..||||..+|.
T Consensus         1 ~~t~~el~~h~~~~~~~v~i~g~VYDvt~~~~~hpgg~~~~~   42 (76)
T PF00173_consen    1 VYTWEELAKHNKKGDCWVIIDGKVYDVTDFLDRHPGGADILK   42 (76)
T ss_dssp             EEEHHHHTTTEETTEEEEEETTEEEECTTTTTTSTTTSHHHH
T ss_pred             CCCHHHHhhhCCCCCEEEEECCEEcccccccccccchhHHHH
Confidence            379999999999999999999999999999999999976654

The microsomal and mitochondrial variants are membrane-bound, while those from erythrocytes and other animal tissues are water-soluble [, ]. The 3D structure of bovine cyt b5 is known, the fold belonging to the alpha+beta class, with 5 strands and 5 short helices forming a framework for supporting a central haem group []. The cytochrome b5 domain is similar to that of a number of oxidoreductases, such as plant and fungal nitrate reductases, sulphite oxidase, yeast flavocytochrome b2 (L-lactate dehydrogenase) and plant cyt b5/acyl lipid desaturase fusion protein.; GO: 0020037 heme binding; PDB: 2I96_A 3KS0_A 1KBI_B 1KBJ_B 1LTD_A 1SZG_B 1SZF_A 1LDC_B 2OZ0_B 1LCO_A ....

>PLN03198 delta6-acyl-lipid desaturase; Provisional

Probab=99.19  E-value=7.6e-12  Score=114.42  Aligned_cols=43  Identities=30%  Similarity=0.626  Sum_probs=40.0

Q ss_pred             CcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .+.+|++|+++|++++||||+|+|+|||||+|++.||||. +|+
T Consensus       103 ~~~~t~~ev~~H~~~~d~Wivi~gkVYDvT~fl~~HPGG~-~i~  145 (526)
T PLN03198        103 SKSHLLSEVAAHNKPNDCWIVIKNKVYDVSDFAAEHPGGS-VIS  145 (526)
T ss_pred             cCcCCHHHHHhhCCCCCeEEEECCEEEecHHHHHhCCCch-HHH
Confidence            4689999999999999999999999999999999999997 553

>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional

Probab=99.13  E-value=4.1e-11  Score=108.14  Aligned_cols=44  Identities=32%  Similarity=0.666  Sum_probs=39.5

Q ss_pred             CCCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          107 SNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       107 ~~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ...+.+|++||++|++++||||+|+|+|||||+|+ .||||. +|+
T Consensus        21 ~~~~~~s~~ev~~h~~~~~~wi~i~g~vYDvt~f~-~HPGG~-~i~   64 (485)
T PLN03199         21 EKPQKISWQEVKKHASPDDAWIIHQNKVYDVSNWH-DHPGGA-VIF   64 (485)
T ss_pred             ccCCccCHHHHHhhCCCCCeEEEECCEEEcCCCcC-cCCCch-HHH
Confidence            34577999999999999999999999999999997 799997 554

>KOG4576 consensus Sulfite oxidase, heme-binding component [Energy production and conversion]

Probab=98.77  E-value=3.3e-09  Score=84.00  Aligned_cols=47  Identities=30%  Similarity=0.633  Sum_probs=42.2

Q ss_pred             CCCcccCHHHHHhhcCC-CCeEEEEcCeEeecCcccccCCCCcccccC
Q 031756          107 SNKRLITMDEVKQHQSE-GSMWTVLKGRVYNLSPYMKFHPGGMAISLC  153 (153)
Q Consensus       107 ~~~~~it~eEv~kHn~~-~d~WivI~GkVYDVT~Fl~~HPGG~~iLl~  153 (153)
                      ..+.+|+.|||.+|+++ +.+||.+.--|||||+|++.||||.+|||.
T Consensus        77 E~l~iY~~EEV~~H~s~e~rIWVTyg~gVyDVTdFv~~HPGGdKillA  124 (167)
T KOG4576|consen   77 ESLHIYTKEEVSSHTSPETRIWVTYGSGVYDVTDFVDLHPGGDKILLA  124 (167)
T ss_pred             hhccchhHHHHHhcCCCccceEEEecCcceeHHHHHHhCCCcceeeee
Confidence            44678999999999985 469999999999999999999999999873

>COG4892 Predicted heme/steroid binding protein [General function prediction only]

Probab=97.50  E-value=8.6e-05  Score=53.22  Aligned_cols=30  Identities=27%  Similarity=0.536  Sum_probs=26.5

Q ss_pred             cccCHHHHHhhcCCC-CeEEEEcCeEeecCc
Q 031756          110 RLITMDEVKQHQSEG-SMWTVLKGRVYNLSP  139 (153)
Q Consensus       110 ~~it~eEv~kHn~~~-d~WivI~GkVYDVT~  139 (153)
                      +.||+|||.++|.++ .++|.++|.||||+.
T Consensus         2 refTLEELs~ynG~nGpaYiA~~G~VYDvS~   32 (81)
T COG4892           2 REFTLEELSKYNGENGPAYIAVNGTVYDVSL   32 (81)
T ss_pred             ceecHHHHHhhcCCCCCeEEEECCEEEeecc
Confidence            679999999999754 699999999999964

>KOG1110 consensus Putative steroid membrane receptor Hpr6

Probab=96.80  E-value=0.002  Score=52.90  Aligned_cols=46  Identities=22%  Similarity=0.446  Sum_probs=36.2

Q ss_pred             CCCcccCHHHHHhhcCCC---CeEEEEcCeEeecCcccc-cCCCCccccc
Q 031756          107 SNKRLITMDEVKQHQSEG---SMWTVLKGRVYNLSPYMK-FHPGGMAISL  152 (153)
Q Consensus       107 ~~~~~it~eEv~kHn~~~---d~WivI~GkVYDVT~Fl~-~HPGG~~iLl  152 (153)
                      +..+.||.+||++++..+   ..++.|+|+|||||.=-. |-|||..-++
T Consensus        53 P~~~dfT~eEL~~ydGs~~d~~Il~AI~G~VYDVT~Gr~FYGp~GpY~~f  102 (183)
T KOG1110|consen   53 PKVRDFTVEELRQYDGSDPDKPILLAINGKVYDVTRGREFYGPGGPYSLF  102 (183)
T ss_pred             CcccccCHHHHHhcCCCCCCCceEEEecceEEEecCCccccCCCCCchhh
Confidence            344579999999998654   499999999999998553 5699986543

6/25-Dx [General function prediction only]

>PF14901 Jiv90: Cleavage inducing molecular chaperone

Probab=84.30  E-value=0.55  Score=34.93  Aligned_cols=14  Identities=21%  Similarity=0.805  Sum_probs=11.9

Q ss_pred             EEEcCeEeecCccc
Q 031756          128 TVLKGRVYNLSPYM  141 (153)
Q Consensus       128 ivI~GkVYDVT~Fl  141 (153)
                      ...+|+|||||+++
T Consensus        59 ~c~~g~VyDiTeWA   72 (94)
T PF14901_consen   59 ACMDGKVYDITEWA   72 (94)
T ss_pred             EEcCceEEehhhhh
Confidence            34699999999986

>KOG1108 consensus Predicted heme/steroid binding protein [General function prediction only]

Probab=83.06  E-value=1.1  Score=38.70  Aligned_cols=39  Identities=18%  Similarity=0.353  Sum_probs=30.8

Q ss_pred             cccCHHHHHhhcCCC---CeEEEEcCeEeecCccc-ccCCCCc
Q 031756          110 RLITMDEVKQHQSEG---SMWTVLKGRVYNLSPYM-KFHPGGM  148 (153)
Q Consensus       110 ~~it~eEv~kHn~~~---d~WivI~GkVYDVT~Fl-~~HPGG~  148 (153)
                      ..||.|||++++..+   ..++.|-|.||||+.=. .|-||+.
T Consensus        60 ~lFtpeeLa~fnGt~e~~piyLaiLGsVfdVs~gk~hYgsG~s  102 (281)
T KOG1108|consen   60 ILFTPEELAKFNGTEEGRPIYLAILGSVFDVSRGKKHYGSGCS  102 (281)
T ss_pred             eeeCHHHHhhccCCCCCCceeeeeeceeeeccCCeeeeCCCCC
Confidence            579999999999644   38999999999999854 2336654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
3lf5_A	88	Structure Of Human Nadh Cytochrome B5 Oxidoreductas		9e-07
1cxy_A	90	Structure And Characterization Of Ectothiorhodospir		3e-05
1ib7_A	94	Solution Structure Of F35y Mutant Of Rat Ferro Cyto		4e-05
2m33_A	104	Solution Nmr Structure Of Full-length Oxidized Micr		5e-05
2i89_A	93	Structure Of Septuple Mutant Of Rat Outer Mitochond		5e-05
1i87_A	98	Solution Structure Of The Water-Soluble Fragment Of		6e-05
1bfx_A	99	The Solution Nmr Structure Of The B Form Of Oxidize		6e-05
1m2i_A	82	Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME		1e-04
1m2m_A	82	Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cyt		1e-04
1f03_A	82	Solution Structure Of Oxidized Bovine Microsomal Cy		1e-04
1aqa_A	94	Solution Structure Of Reduced Microsomal Rat Cytoch		1e-04
1jex_A	94	Solution Structure Of A67v Mutant Of Rat Ferro Cyto		1e-04
1m20_A	82	Crystal Structure Of F35y Mutant Of Trypsin-Solubil		1e-04
1do9_A	94	Solution Structure Of Oxidized Microsomal Rabbit Cy		1e-04
1blv_A	94	Solution Structure Of Oxidized Rat Microsomal Cytoc		1e-04
1hko_A	104	Nmr Structure Of Bovine Cytochrome B5 Length = 104		3e-04
1cyo_A	93	Bovine Cytochrome B(5) Length = 93		3e-04
2i96_A	108	Solution Structure Of The Oxidized Microsomal Human		3e-04
1ehb_A	82	Crystal Structure Of Recombinant Trypsin-Solubilize		4e-04
1es1_A	82	Crystal Structure Of Val61his Mutant Of Trypsin-Sol		4e-04
1u9u_A	82	Crystal Structure Of F58y Mutant Of Cytochrome B5 L		4e-04
1i5u_A	82	Solution Structure Of Cytochrome B5 Triple Mutant (		4e-04
1j0q_A	82	Solution Structure Of Oxidized Bovine Microsomal Cy		4e-04
1u9m_A	82	Crystal Structure Of F58w Mutant Of Cytochrome B5 L		4e-04
1lqx_A	82	Crystal Structure Of V45e Mutant Of Cytochrome B5 L		5e-04
1lr6_A	82	Crystal Structure Of V45y Mutant Of Cytochrome B5 L		5e-04
1sh4_A	82	Solution Structure Of Oxidized Bovine Microsomal Cy		5e-04
3ner_A	92	Structure Of Human Type B Cytochrome B5 Length = 92		8e-04

>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase (Ncb5or) B5 Domain To 1.25a Resolution Length = 88

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 112 ITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +T +E+K+H  +   W  ++G VYN+SPYM++HPGG
Sbjct: 8   VTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGG 43

>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira Vacuolata Cytochrome B558, A Prokaryotic Homologue Of Cytochrome B5 Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 106 QSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPG--GMAISLC 153
           ++   + T+++V +H S    W  + G+VY+L+PY+  HPG  GM +  C
Sbjct: 4   EATLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWC 53

>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized Microsomal Rabbit Cytochrome B5 Length = 104

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 103 LKGQSNK--RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  QS+K  +  T++E+K+H    S W +L  +VY+L+ +++ HPGG  +
Sbjct: 1   MAAQSDKDVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEV 50

>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial Membrane Cytochrome B5 Length = 93

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 103 LKGQSNKRLIT---MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           + GQ +   +T   ++EV +H +  S W VL GRVY+L+ ++  HPGG  +
Sbjct: 1   MNGQGSDPAVTYYRLEEVAKHNTSESTWMVLHGRVYDLTRFLSEHPGGEEV 51

>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat Hepatic Apocytochrome B5 Length = 98

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 106 QSNK--RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           QS+K  +  T++E+++H+   S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   QSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEV 49

>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat Microsomal Cytochrome B5, Minimized Average Structure Length = 99

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 106 QSNK--RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           QS+K  +  T++E+++H+   S W +L  +VY+L+ +++ HPGG  +
Sbjct: 4   QSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEV 50

>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5 Length = 82

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG A+
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAV 43

>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cytochrome B5 Length = 82

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG A+
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAV 43

>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its Interaction With Cytochrome C Length = 82

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG A+
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAV 43

>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome B5, Nmr, Minimized Average Structure Length = 94

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H+   S W +L  +VY+L+ +++ HPGG  +
Sbjct: 5   KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEV 45

>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro Cytochrome B5 Length = 94

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H+   S W +L  +VY+L+ +++ HPGG  +
Sbjct: 5   KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEV 45

>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ Y++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKYLEEHPGGEEV 43

>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit Cytochrome B5. Factors Determining The Heterogeneous Binding Of The Heme Length = 94

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+K+H    S W +L  +VY+L+ +++ HPGG  +
Sbjct: 5   KYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEV 45

>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome B5 In The Presence Of 2 M Guanidinium Chloride: Monitoring The Early Steps In Protein Unfolding Length = 94

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H+   S W +L  +VY+L+ +++ HPGG  +
Sbjct: 5   KYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEV 45

>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5 Length = 104

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 9   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 49

>pdb|1CYO|A Chain A, Bovine Cytochrome B(5) Length = 93

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 5   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 45

>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human Cytochrome B5 Length = 108

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 27/41 (65%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H    S W +L  +VY+L+ +++ HPGG  +
Sbjct: 10  KYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEV 50

>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of Trypsin-Solubilized Fragment Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant (E48aE56AD60A) Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant V61h Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEV 43

>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGG 40

>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5 Length = 82

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGG 40

>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal Cytochrome B5 Mutant V45h Length = 82

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGG 147
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG
Sbjct: 3   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGG 40

>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5 Length = 92

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 104 KGQSNKRLIT---MDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           KGQ  +  +T   ++EV +  S   +W V+ GRVY+++ ++  HPGG  + L
Sbjct: 1   KGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLL 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
3lf5_A	88	Cytochrome B5 reductase 4; NCB5OR, electron transf	5e-16
2keo_A	112	Probable E3 ubiquitin-protein ligase HERC2; protei	1e-15
1x3x_A	82	Cytochrome B5; hemoprotein, porcine parasitic nama	8e-15
3ner_A	92	Cytochrome B5 type B; heme, electron transport; HE	2e-14
1cxy_A	90	Cytochrome B5; helix, beta-strand, electron transp	2e-14
2ibj_A	88	Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif	4e-14
1cyo_A	93	Cytochrome B5; electron transport; HET: HEM; 1.50A	6e-14
1hko_A	104	Cytochrome B5; electron transfer protein, heme, el	8e-14
1mj4_A	82	Sulfite oxidase; cytochrome B5, heme, oxidoreducta	2e-12
1kbi_A	511	Cytochrome B2, L-LCR; flavocytochrome B2, electron	5e-10
1sox_A	466	Sulfite oxidase; oxidoreductase, sulfite oxidation	9e-08

>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens} Length = 88

 Score = 67.7 bits (166), Expect = 5e-16
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 106 QSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +     +T +E+K+H  +   W  ++G VYN+SPYM++HPGG   
Sbjct: 2   KGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDE 46

>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens} Length = 112

 Score = 67.5 bits (165), Expect = 1e-15
 Identities = 11/57 (19%), Positives = 26/57 (45%)

Query: 94  TQTHPDLAGLKGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +    +L          L+ + +++ H ++G  WTV+ G+VY++  +        +I
Sbjct: 8   SSGRENLYFQGNNEKVTLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSI 64

>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum} Length = 82

 Score = 64.2 bits (157), Expect = 8e-15
 Identities = 13/41 (31%), Positives = 25/41 (60%)

Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           +  T +EV +H ++  +W +  G V++++ + K HPGG  I
Sbjct: 4   KKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGKVI 44

>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A* Length = 92

 Score = 63.8 bits (156), Expect = 2e-14
 Identities = 14/47 (29%), Positives = 28/47 (59%)

Query: 106 QSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           +++     ++EV +  S   +W V+ GRVY+++ ++  HPGG  + L
Sbjct: 6   ETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLL 52

>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1 Length = 90

 Score = 63.5 bits (155), Expect = 2e-14
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 104 KGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           + ++   + T+++V +H S    W  + G+VY+L+PY+  HPG   + L
Sbjct: 2   ETEATLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMML 50

>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica} Length = 88

 Score = 62.7 bits (153), Expect = 4e-14
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 107 SNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
            + +  T  EV ++ ++   W ++   VY+++ ++  HPGG  +
Sbjct: 4   EDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEV 47

>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ... Length = 93

 Score = 62.3 bits (152), Expect = 6e-14
 Identities = 13/43 (30%), Positives = 28/43 (65%)

Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +  
Sbjct: 5   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR 47

>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A* Length = 104

 Score = 62.4 bits (152), Expect = 8e-14
 Identities = 13/49 (26%), Positives = 29/49 (59%)

Query: 104 KGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           +     +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +  
Sbjct: 3   ESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR 51

>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1 Length = 82

 Score = 58.1 bits (141), Expect = 2e-12
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 106 QSNKRLITMDEVKQHQS-EGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           Q +  + T +EV  H S E  +W  L   V++++ ++  HPGG + 
Sbjct: 1   QESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSK 46

>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Length = 511

 Score = 55.4 bits (134), Expect = 5e-10
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 104 KGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           K   NK+ I+  EV +H      W V+ G VY+L+ ++  HPGG  +  
Sbjct: 3   KLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIK 51

>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* Length = 466

 Score = 49.1 bits (117), Expect = 9e-08
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 112 ITMDEVKQHQSEGSM-WTVLKGRVYNLSPYMKFHPGGMA 149
            T +EV +H+S     W      V++++ +++ HPGG  
Sbjct: 7   YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPD 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3ner_A	92	Cytochrome B5 type B; heme, electron transport; HE	99.63
1mj4_A	82	Sulfite oxidase; cytochrome B5, heme, oxidoreducta	99.63
1cxy_A	90	Cytochrome B5; helix, beta-strand, electron transp	99.63
1cyo_A	93	Cytochrome B5; electron transport; HET: HEM; 1.50A	99.62
2ibj_A	88	Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif	99.62
3lf5_A	88	Cytochrome B5 reductase 4; NCB5OR, electron transf	99.61
1x3x_A	82	Cytochrome B5; hemoprotein, porcine parasitic nama	99.61
1hko_A	104	Cytochrome B5; electron transfer protein, heme, el	99.6
2keo_A	112	Probable E3 ubiquitin-protein ligase HERC2; protei	99.55
1kbi_A	511	Cytochrome B2, L-LCR; flavocytochrome B2, electron	99.34
1j03_A	102	Putative steroid binding protein; alpha and beta,	99.3

>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*

Probab=99.63  E-value=1.1e-16  Score=115.17  Aligned_cols=46  Identities=30%  Similarity=0.704  Sum_probs=43.0

Q ss_pred             CCCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          107 SNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       107 ~~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      +.++.||++||++|++.++|||+|+|+|||||+|+..||||.++|+
T Consensus         7 ~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~   52 (92)
T 3ner_A            7 TSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLL   52 (92)
T ss_dssp             CCSCEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHH
T ss_pred             CCCCeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHH
Confidence            4568899999999999999999999999999999999999998765

>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1

Probab=99.63  E-value=3.4e-17  Score=115.05  Aligned_cols=44  Identities=27%  Similarity=0.678  Sum_probs=39.4

Q ss_pred             CcccCHHHHHhhcCCCC-eEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGS-MWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d-~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ++.||++||++|+++++ |||+|+|+|||||+|+.+||||.++|+
T Consensus         4 ~~~~t~~ev~~h~~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~il   48 (82)
T 1mj4_A            4 THIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLM   48 (82)
T ss_dssp             CCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHH
T ss_pred             CCccCHHHHHHhcCCCCCeEEEECCEEEEchHHHHhCCCHhHHHH
Confidence            57899999999999998 999999999999999999999966554

>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1

Probab=99.63  E-value=1.7e-16  Score=113.22  Aligned_cols=45  Identities=33%  Similarity=0.781  Sum_probs=42.2

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|+++++|||+|+|+|||||+|+..||||.++|+
T Consensus         6 ~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~   50 (90)
T 1cxy_A            6 TLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMML   50 (90)
T ss_dssp             CCCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTG
T ss_pred             cCCCcCHHHHHHhcCCCCEEEEECCEEEECccchhhCcChHHHHH
Confidence            457899999999999999999999999999999999999998775

>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...

Probab=99.62  E-value=1.2e-16  Score=114.74  Aligned_cols=44  Identities=30%  Similarity=0.702  Sum_probs=41.4

Q ss_pred             CcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .+.||++||++|++.++|||+|+|+|||||+|+.+||||.++|+
T Consensus         4 ~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~   47 (93)
T 1cyo_A            4 VKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR   47 (93)
T ss_dssp             CCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHH
T ss_pred             CCccCHHHHHhhCCCCCEEEEECCEEEECCCcchhCcChHHHHH
Confidence            57899999999999999999999999999999999999998764

>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}

Probab=99.62  E-value=1.7e-16  Score=112.45  Aligned_cols=45  Identities=22%  Similarity=0.630  Sum_probs=41.9

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|++.++|||+|+|+|||||+|+..||||.++|+
T Consensus         5 ~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~   49 (88)
T 2ibj_A            5 DVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLI   49 (88)
T ss_dssp             CCCEECHHHHHTSEETTEEEEEETTEEEECGGGTTTCTTCSHHHH
T ss_pred             cCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcCHHHHHH
Confidence            357899999999999999999999999999999999999987765

>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}

Probab=99.61  E-value=1.3e-16  Score=113.96  Aligned_cols=45  Identities=38%  Similarity=0.793  Sum_probs=42.1

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .++.||++||++|+++++|||+|+|+|||||+|+.+||||.++|+
T Consensus         4 ~l~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~   48 (88)
T 3lf5_A            4 RLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELM   48 (88)
T ss_dssp             SSEEECHHHHHHCEETTEEEEEETTEEEECGGGTTTCTTCHHHHH
T ss_pred             CCCEeCHHHHHhhCCCCCEEEEECCEEEECccchhhCcChhhhhh
Confidence            468899999999999999999999999999999999999998765

>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}

Probab=99.61  E-value=2.9e-16  Score=110.13  Aligned_cols=43  Identities=30%  Similarity=0.729  Sum_probs=40.3

Q ss_pred             CcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .+.||++||++|++.++|||+|+|+|||||+|+.+|||| ++|+
T Consensus         3 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG-~~i~   45 (82)
T 1x3x_A            3 DKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGG-KVIL   45 (82)
T ss_dssp             SCEECHHHHHTCEETTEEEEEETTEEEECGGGGGGCTTG-GGGG
T ss_pred             CCccCHHHHHhhCCCCCEEEEECCEEEECCcchhhCcCh-hhhh
Confidence            367999999999999999999999999999999999999 7765

>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*

Probab=99.60  E-value=2.1e-16  Score=116.09  Aligned_cols=45  Identities=29%  Similarity=0.685  Sum_probs=42.3

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|++.++|||+|+|+|||||+|+.+||||.++|+
T Consensus         7 ~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~   51 (104)
T 1hko_A            7 AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR   51 (104)
T ss_dssp             CCEEECHHHHHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHHH
T ss_pred             cCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCcChHHHHH
Confidence            467899999999999999999999999999999999999998775

>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}

Probab=99.55  E-value=5.4e-16  Score=115.62  Aligned_cols=45  Identities=22%  Similarity=0.581  Sum_probs=42.3

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|++.++|||+|+|+|||||+|+.+||||.++|+
T Consensus        22 ~~~~~t~~Ev~~h~~~~d~wvvi~G~VYDVT~fl~~HPGG~~~l~   66 (112)
T 2keo_A           22 KVTLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILA   66 (112)
T ss_dssp             CCCEECHHHHHHHHHHTCCEEEETTEEEEHHHHHHHHTSTTSTTG
T ss_pred             CCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCCCchhhhh
Confidence            357899999999999999999999999999999999999998876

>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*

Probab=99.34  E-value=2.6e-13  Score=121.63  Aligned_cols=46  Identities=35%  Similarity=0.687  Sum_probs=42.7

Q ss_pred             CCCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          107 SNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       107 ~~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ...+.||++||++|++.++|||+|+|+|||||+|+.+||||.++|+
T Consensus         6 ~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~i~   51 (511)
T 1kbi_A            6 MNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIK   51 (511)
T ss_dssp             SCSCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHH
T ss_pred             CCCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcChHHHHH
Confidence            3467899999999999999999999999999999999999998775

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A

Probab=99.30  E-value=1.4e-12  Score=95.48  Aligned_cols=41  Identities=20%  Similarity=0.405  Sum_probs=37.1

Q ss_pred             cccCHHHHHhhcCCC---CeEEEEcCeEeecCcccc-cCCCCccc
Q 031756          110 RLITMDEVKQHQSEG---SMWTVLKGRVYNLSPYMK-FHPGGMAI  150 (153)
Q Consensus       110 ~~it~eEv~kHn~~~---d~WivI~GkVYDVT~Fl~-~HPGG~~i  150 (153)
                      +.||++||++|+..+   +|||+|+|+|||||+|.. +||||...
T Consensus         3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~~~   47 (102)
T 1j03_A            3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYS   47 (102)
T ss_dssp             CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSSTTT
T ss_pred             cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCccc
Confidence            579999999999876   799999999999999987 79999843

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1kbia2	97	d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal	6e-12
d1cxya_	81	d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira	6e-12
d1euea_	86	d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegic	2e-10
d1cyoa_	88	d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [Ta	7e-10
d1mj4a_	80	d.120.1.1 (A:) Sulfite oxidase, N-terminal domain	7e-09
d1soxa2	91	d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal dom	4e-08

>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 97

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Flavocytochrome b2, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (136), Expect = 6e-12
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 104 KGQSNKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
           K   NK+ I+  EV +H      W V+ G VY+L+ ++  HPGG  +
Sbjct: 3   KLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDV 49

>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]} Length = 81

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b558
species: Ectothiorhodospira vacuolata [TaxId: 1054]

 Score = 56.1 bits (135), Expect = 6e-12
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 111 LITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           + T+++V +H S    W  + G+VY+L+PY+  HPG   + L
Sbjct: 4   VFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMML 45

>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.8 bits (124), Expect = 2e-10
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
                 ++EV +  +    W V+ GRVY+++ ++  HPGG  I L
Sbjct: 3   AVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILL 47

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} Length = 88

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.6 bits (121), Expect = 7e-10
 Identities = 13/43 (30%), Positives = 28/43 (65%)

Query: 110 RLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL 152
           +  T++E+++H +  S W +L  +VY+L+ +++ HPGG  +  
Sbjct: 5   KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR 47

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 7e-09
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 110 RLITMDEVKQHQS-EGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
            + T +EV  H S E  +W  L   V++++ ++  HPGG + 
Sbjct: 3   HIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSK 44

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.1 bits (109), Expect = 4e-08
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 111 LITMDEVKQHQS-EGSMWTVLKGRVYNLSPYMKFHPGGMAI 150
             T +EV +H+S E  +W      V++++ +++ HPGG   
Sbjct: 4   EYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDK 44

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1cxya_	81	Cytochrome b558 {Ectothiorhodospira vacuolata [Tax	99.73
d1euea_	86	Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 101	99.69
d1cyoa_	88	Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}	99.68
d1soxa2	91	Sulfite oxidase, N-terminal domain {Chicken (Gallu	99.68
d1kbia2	97	Flavocytochrome b2, N-terminal domain {Baker's yea	99.66
d1mj4a_	80	Sulfite oxidase, N-terminal domain {Human (Homo sa	99.63
d1t0ga_	109	Putative steroid binding protein AT2G24940 {Thale	97.77

>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b558
species: Ectothiorhodospira vacuolata [TaxId: 1054]

Probab=99.73  E-value=7.4e-19  Score=121.60  Aligned_cols=44  Identities=34%  Similarity=0.795  Sum_probs=42.2

Q ss_pred             CcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ++.||++||++|++++||||+|+|+|||||+|+..||||.++|+
T Consensus         2 lp~~t~~ev~~H~~~~d~Wivi~g~VYDvT~f~~~HPGG~~~l~   45 (81)
T d1cxya_           2 LPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMML   45 (81)
T ss_dssp             CCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTG
T ss_pred             cCccCHHHHHhhCCCCCEEEEECCEEEeccceeecCCCcHHHHH
Confidence            57899999999999999999999999999999999999998886

>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.6e-18  Score=119.58  Aligned_cols=46  Identities=30%  Similarity=0.670  Sum_probs=43.0

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCcccccC
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISLC  153 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl~  153 (153)
                      ..+.||++||++|++++||||+|+|+|||||+|+..||||.++|+.
T Consensus         3 ~~~~yt~~Ev~~H~~~~d~Wvii~g~VYDvT~f~~~HPGG~~~i~~   48 (86)
T d1euea_           3 AVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLE   48 (86)
T ss_dssp             SCCEECHHHHTTCEETTEEEEEETTEEEECGGGGGGCTTCSHHHHT
T ss_pred             CCCEECHHHHHhhCCCCCEEEEECCEEEecceeeeccCcchHHHHH
Confidence            4678999999999999999999999999999999999999988763

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.68  E-value=4.4e-18  Score=119.57  Aligned_cols=45  Identities=29%  Similarity=0.685  Sum_probs=42.5

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|+++++|||+|+|+|||||+|+..||||.++|+
T Consensus         3 ~~k~yt~~Ev~~H~~~~d~Wvii~g~VYDvT~f~~~HPGG~~~i~   47 (88)
T d1cyoa_           3 AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLR   47 (88)
T ss_dssp             SCCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHH
T ss_pred             ccccccHHHHHhhCCCCCeEEEECCEEEecchhhcccCCchHHHH
Confidence            357899999999999999999999999999999999999998875

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.68  E-value=4.6e-18  Score=119.80  Aligned_cols=44  Identities=27%  Similarity=0.545  Sum_probs=40.7

Q ss_pred             CcccCHHHHHhhcCCCC-eEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSEGS-MWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~~d-~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ++.||++||++|++.++ |||+|+|+|||||+|+..||||..+|+
T Consensus         2 lP~~T~~Ev~~H~~~~~~~Wiii~g~VYDvT~f~~~HPGG~~~i~   46 (91)
T d1soxa2           2 YPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKIL   46 (91)
T ss_dssp             CCEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHG
T ss_pred             CCccCHHHHHHhCCCCCceEEEECCEEEeccceecccCCcHHHHH
Confidence            57899999999998766 999999999999999999999998775

>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Flavocytochrome b2, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=9.5e-18  Score=119.94  Aligned_cols=45  Identities=36%  Similarity=0.713  Sum_probs=42.3

Q ss_pred             CCcccCHHHHHhhcCCCCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          108 NKRLITMDEVKQHQSEGSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      ..+.||++||++|++++||||+|+|+|||||+|+..||||.++|+
T Consensus         7 ~~~~it~~EV~~H~~~~d~Wvvi~g~VYDvT~f~~~HPGG~~~i~   51 (97)
T d1kbia2           7 NKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIK   51 (97)
T ss_dssp             CSCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHH
T ss_pred             CcCccCHHHHHHhCCCCCEEEEECCEEEecchhhhhCCChHHHHH
Confidence            457899999999999999999999999999999999999988775

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.6e-17  Score=114.38  Aligned_cols=44  Identities=27%  Similarity=0.668  Sum_probs=39.0

Q ss_pred             CcccCHHHHHhhcCC-CCeEEEEcCeEeecCcccccCCCCccccc
Q 031756          109 KRLITMDEVKQHQSE-GSMWTVLKGRVYNLSPYMKFHPGGMAISL  152 (153)
Q Consensus       109 ~~~it~eEv~kHn~~-~d~WivI~GkVYDVT~Fl~~HPGG~~iLl  152 (153)
                      .+.||++||++|+++ ++|||+|+|+|||||+|+..||||.++|+
T Consensus         2 ~~v~T~~Ev~~H~~~~~~~Wiii~g~VYDvT~f~~~HPGG~~~i~   46 (80)
T d1mj4a_           2 THIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLM   46 (80)
T ss_dssp             CCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHH
T ss_pred             CccccHHHHHHhCCCCCCeEEEECCEEEeeeeeHhhcCChhHHHH
Confidence            468999999999975 56999999999999999999999988775

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.77  E-value=9.1e-06  Score=58.47  Aligned_cols=44  Identities=18%  Similarity=0.376  Sum_probs=35.2

Q ss_pred             CCcccCHHHHHhhcCCC---CeEEEEcCeEeecCcccc-cCCCCcccc
Q 031756          108 NKRLITMDEVKQHQSEG---SMWTVLKGRVYNLSPYMK-FHPGGMAIS  151 (153)
Q Consensus       108 ~~~~it~eEv~kHn~~~---d~WivI~GkVYDVT~Fl~-~HPGG~~iL  151 (153)
                      .++.||.+||++++..+   .+||.|+|+|||||.-.. +-|||..-+
T Consensus         8 ~~~~fT~eeL~~ydG~~~~~piyvAi~G~VyDVt~~~~~ygpgg~Y~~   55 (109)
T d1t0ga_           8 HLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSM   55 (109)
T ss_dssp             SSEEEEHHHHTTCSSCSSSCCCEEEETTEEEECGGGTTTSTTTCTTTT
T ss_pred             hhhhCCHHHHHHcCCCCCCccEEEEECCEEEEccCCcceECCCCcccc
Confidence            46789999999998743   399999999999997554 559987543