Citrus Sinensis ID: 031793

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MEVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEEEccccHHHHHHHHHHHHHHHHccccccccccccEEEEccccccHHHHHHHHHHHccccEEEEEEccccccEEEEEEEccHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccHHHHHHccccHHHHHHcccccccEEEccEEEEEEEccHHHHHHHHHHHHHHHHccccEEcccccccEEEccccHHHHHHHHHHHHcccccEEEEEEEccccccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEc
Coil and Loop (DISEMBL)
MEVFEFLCLQFDLIlgfpfqmallpegttellhhdklllplikcqNVIILTATNVTELDKEWNCLIELLRSgglslmepytskslttnlsdleaAQPLSKlclefpdlhigcyrksrqgpliisfeGKDQARIEAAIESLFKKFHrgafsevv
Flexible Loop (DISEMBL)
MEVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKfhrgafsevv
Low Complexity Region (SEG)
MEVFEFLCLQFDLILGFPFQMALLPEGTTEllhhdklllplIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Disordered region (IsUnstruct)
**VFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHR*******
Disordered Region (DISOPRED)
*EVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Disordered Region (DISEMBL)
MEVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Disordered Region (DISPRO)
MEVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEVFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
225441189	514	PREDICTED: uncharacterized protein LOC10	0.869	0.258	0.753	6e-51
255556898	512	molybdopterin-binding, putative [Ricinus	0.869	0.259	0.716	8e-50
357510801	502	FAD synthetase [Medicago truncatula] gi|	0.921	0.280	0.654	5e-47
356572474	506	PREDICTED: uncharacterized protein LOC10	0.921	0.278	0.661	8e-47
356505260	506	PREDICTED: uncharacterized protein LOC10	0.921	0.278	0.640	6e-45
449440409	512	PREDICTED: uncharacterized protein LOC10	0.869	0.259	0.656	1e-44
297810413	497	phosphoadenosine phosphosulfate reductas	0.862	0.265	0.624	3e-42
14423558	497	putative protein [Arabidopsis thaliana]	0.915	0.281	0.595	3e-42
18414227	497	phosphoadenosine phosphosulfate (PAPS) r	0.915	0.281	0.595	4e-42
297596474	343	Os01g0259600 [Oryza sativa Japonica Grou	0.908	0.405	0.546	1e-34

>gi|225441189|ref|XP_002269812.1| PREDICTED: uncharacterized protein LOC100250368 [Vitis vinifera] gi|297739964|emb|CBI30146.3| unnamed protein product [Vitis vinifera]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 101/134 (75%), Positives = 113/134 (84%), Gaps = 1/134 (0%)

Query: 20  QMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLME 78
           +MA LPEG TELLHH+KL +PLIKCQNV ILTATNVTELDKEW+CLIEL RS GL  LME
Sbjct: 380 EMAQLPEGITELLHHEKLSVPLIKCQNVFILTATNVTELDKEWDCLIELTRSSGLLVLME 439

Query: 79  PYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIE 138
           P+ SK +TTNLSD+EAAQ LSKLC EFPDL+IGCYRKSR  PLIISFEGKDQ R+E+A+E
Sbjct: 440 PFLSKRMTTNLSDVEAAQALSKLCFEFPDLYIGCYRKSRLAPLIISFEGKDQTRLESAVE 499

Query: 139 SLFKKFHRGAFSEV 152
           +L KKF  G  SE 
Sbjct: 500 ALSKKFPAGQISEA 513

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556898|ref|XP_002519482.1| molybdopterin-binding, putative [Ricinus communis] gi|223541345|gb|EEF42896.1| molybdopterin-binding, putative [Ricinus communis]

 Score =  201 bits (511), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 96/134 (71%), Positives = 113/134 (84%), Gaps = 1/134 (0%)

Query: 20  QMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLME 78
           +MALLPEG TELLHHDKL +P+IKCQNVIIL ATN+ ELD+EW CL E  RS GL + ME
Sbjct: 378 EMALLPEGITELLHHDKLPVPMIKCQNVIILAATNIGELDREWECLTEFTRSYGLLATME 437

Query: 79  PYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIE 138
           P+ +K LTTN+SD+E AQPLSKLCLEFPDL+IG YRKSR G LII+FEGK QARI++A+E
Sbjct: 438 PFAAKRLTTNISDVEIAQPLSKLCLEFPDLNIGVYRKSRNGTLIITFEGKKQARIDSAVE 497

Query: 139 SLFKKFHRGAFSEV 152
           +L KKFH G FSE+
Sbjct: 498 ALRKKFHPGVFSEM 511

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510801|ref|XP_003625689.1| FAD synthetase [Medicago truncatula] gi|355500704|gb|AES81907.1| FAD synthetase [Medicago truncatula] gi|388512539|gb|AFK44331.1| unknown [Medicago truncatula]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 118/142 (83%), Gaps = 1/142 (0%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D  +G   +MA LPEG TELLHHD L +PL+KCQNVIIL+AT+++E++K+W+CLIEL +S
Sbjct: 360 DQCIGDRNEMAQLPEGITELLHHDSLTVPLMKCQNVIILSATDISEMEKQWDCLIELTKS 419

Query: 72  GGL-SLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQ 130
             L +L+EP+ SK +TTNLSD+E AQPLSKLCLEFPDL IGCYRK+R G +IISF+GKD 
Sbjct: 420 SDLLTLLEPFISKHVTTNLSDVEIAQPLSKLCLEFPDLCIGCYRKARYGSVIISFKGKDP 479

Query: 131 ARIEAAIESLFKKFHRGAFSEV 152
           AR+E+AIE+L KKF  GAF E+
Sbjct: 480 ARLESAIEALQKKFTSGAFVEM 501

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572474|ref|XP_003554393.1| PREDICTED: uncharacterized protein LOC100816619 [Glycine max]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 114/142 (80%), Gaps = 1/142 (0%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D   G   +MA LPEG TEL HHDKL +PLIKC+NVIIL+ATNV EL+K+W+C IEL +S
Sbjct: 364 DQCTGDRNEMAQLPEGITELWHHDKLSVPLIKCENVIILSATNVPELEKQWDCWIELAKS 423

Query: 72  GGL-SLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQ 130
             L +L+EPY SK +TTNLSD+E AQPLSKLCLEFPDL+IGCYRK+R G LI+SF+GKD 
Sbjct: 424 SDLLALLEPYVSKDVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKARYGSLIVSFKGKDL 483

Query: 131 ARIEAAIESLFKKFHRGAFSEV 152
            RIE+AI++L KKF   AF E+
Sbjct: 484 TRIESAIKALHKKFQPSAFVEM 505

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505260|ref|XP_003521410.1| PREDICTED: uncharacterized protein LOC100795114 [Glycine max]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 112/142 (78%), Gaps = 1/142 (0%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D   G   +MA LPEG TEL HHDKL +PLIKC+NVIIL+ATNV E++K+W+C IEL +S
Sbjct: 364 DQCTGDRNEMAQLPEGITELWHHDKLSVPLIKCENVIILSATNVPEMEKQWDCWIELAKS 423

Query: 72  GGL-SLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQ 130
             L +L+EPY SK +TT+LSD+E AQPLSKLCLEFPDL+IGCYR +R G LI+SF+GKD 
Sbjct: 424 SDLLALLEPYVSKHVTTSLSDVEIAQPLSKLCLEFPDLYIGCYRNARYGSLIVSFKGKDL 483

Query: 131 ARIEAAIESLFKKFHRGAFSEV 152
            RIE+AI++L KKF   AF E 
Sbjct: 484 TRIESAIKALQKKFQPSAFIET 505

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440409|ref|XP_004137977.1| PREDICTED: uncharacterized protein LOC101215823 [Cucumis sativus] gi|449501110|ref|XP_004161280.1| PREDICTED: uncharacterized LOC101215823 [Cucumis sativus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 110/134 (82%), Gaps = 1/134 (0%)

Query: 20  QMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLME 78
           +MA LPEG TELLHH+KL +PLIKC NVI+LTATN+TELD +W+CLIEL R+G L  L+E
Sbjct: 372 EMAQLPEGITELLHHEKLPVPLIKCHNVIVLTATNLTELDLQWDCLIELTRTGDLFPLLE 431

Query: 79  PYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIE 138
           PY SK LTT LSD+E A  L+KLCLEFPD+HIGCYR++R GP+IISF+GK++ R + A E
Sbjct: 432 PYKSKHLTTKLSDVEIAPSLAKLCLEFPDIHIGCYREARSGPIIISFKGKNEERNQLAAE 491

Query: 139 SLFKKFHRGAFSEV 152
           +L KKF  GAF++ 
Sbjct: 492 ALSKKFQPGAFTDT 505

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810413|ref|XP_002873090.1| phosphoadenosine phosphosulfate reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318927|gb|EFH49349.1| phosphoadenosine phosphosulfate reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 107/133 (80%), Gaps = 1/133 (0%)

Query: 20  QMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEP 79
           +MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + GG SL+E 
Sbjct: 365 EMAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE- 423

Query: 80  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIES 139
           Y+S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GKD ARI++A ++
Sbjct: 424 YSSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGKDNARIDSAAQA 483

Query: 140 LFKKFHRGAFSEV 152
           L KKF +  F E+
Sbjct: 484 LCKKFKKDVFVEI 496

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14423558|gb|AAK62461.1|AF387016_1 putative protein [Arabidopsis thaliana] gi|20148293|gb|AAM10037.1| putative protein [Arabidopsis thaliana]

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 109/141 (77%), Gaps = 1/141 (0%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D   G   +MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + 
Sbjct: 357 DQCTGDKNEMAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKL 416

Query: 72  GGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQA 131
           GG SL+E Y+S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GKD A
Sbjct: 417 GGGSLIE-YSSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGKDNA 475

Query: 132 RIEAAIESLFKKFHRGAFSEV 152
           R+++A ++L KKF +  F E+
Sbjct: 476 RMDSAAQALRKKFKKDVFVEI 496

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414227|ref|NP_568117.1| phosphoadenosine phosphosulfate (PAPS) reductase family protein [Arabidopsis thaliana] gi|7378626|emb|CAB83302.1| putative protein [Arabidopsis thaliana] gi|332003219|gb|AED90602.1| phosphoadenosine phosphosulfate (PAPS) reductase family protein [Arabidopsis thaliana]

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 109/141 (77%), Gaps = 1/141 (0%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D   G   +MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + 
Sbjct: 357 DQCTGDRNEMAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKL 416

Query: 72  GGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQA 131
           GG SL+E Y+S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GKD A
Sbjct: 417 GGGSLIE-YSSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGKDNA 475

Query: 132 RIEAAIESLFKKFHRGAFSEV 152
           R+++A ++L KKF +  F E+
Sbjct: 476 RMDSAAQALRKKFKKDVFVEI 496

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297596474|ref|NP_001042640.2| Os01g0259600 [Oryza sativa Japonica Group] gi|56783972|dbj|BAD81409.1| unknown protein [Oryza sativa Japonica Group] gi|56783975|dbj|BAD81430.1| unknown protein [Oryza sativa Japonica Group] gi|255673076|dbj|BAF04554.2| Os01g0259600 [Oryza sativa Japonica Group]

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 2/141 (1%)

Query: 12  DLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRS 71
           D   G   +MALLPEG TELLHH  L LPLIKC+NV+IL ATNV EL+ EW CL++   S
Sbjct: 201 DNYTGDRNEMALLPEGITELLHHKMLPLPLIKCKNVVILAATNVDELETEWGCLLDTQES 260

Query: 72  GGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQA 131
           G L + + + SK L T+L D++ A  ++KLC++F D++IGCYR SR GPL++SF GKD  
Sbjct: 261 G-LVMAKSFVSKHLCTSLLDVKIAPVVAKLCIDFSDVYIGCYRISRSGPLVVSFIGKDNQ 319

Query: 132 RIEAAIESLFKKFHRGAFSEV 152
           R+EAA E L   F  G FS+V
Sbjct: 320 RVEAAAEKLTNSFE-GQFSQV 339

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2831849	497	AT5G03430 [Arabidopsis thalian	0.862	0.265	0.556	4e-35

TAIR|locus:2831849 AT5G03430 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 74/133 (55%), Positives = 97/133 (72%)

Query:    20 QMALLPEGTTEXXXXXXXXXXXIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEP 79
             +MA LPEG TE           IKC+NVI+L ATN  EL+KEW CL EL + GG SL+E 
Sbjct:   365 EMAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE- 423

Query:    80 YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIES 139
             Y+S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GKD AR+++A ++
Sbjct:   424 YSSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGKDNARMDSAAQA 483

Query:   140 LFKKFHRGAFSEV 152
             L KKF +  F E+
Sbjct:   484 LRKKFKKDVFVEI 496


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       142   0.00091  102 3  11 22  0.40    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  135 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.84u 0.13s 12.97t   Elapsed:  00:00:01
  Total cpu time:  12.84u 0.13s 12.97t   Elapsed:  00:00:01
  Start:  Fri May 10 00:44:17 2013   End:  Fri May 10 00:44:18 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
COG1058	255	CinA Predicted nucleotide-utilizing enzyme related	100.0
PRK00549	414	competence damage-inducible protein A; Provisional	99.98
PRK03673	396	hypothetical protein; Provisional	99.97
PRK03670	252	competence damage-inducible protein A; Provisional	99.97
TIGR00200	413	cinA_nterm competence/damage-inducible protein Cin	99.95
PRK01215	264	competence damage-inducible protein A; Provisional	99.94
cd00885	170	cinA Competence-damaged protein. CinA is the first	99.69
PF00994	144	MoCF_biosynth: Probable molybdopterin binding doma	94.23
smart00852	135	MoCF_biosynth Probable molybdopterin binding domai	91.19
TIGR00177	144	molyb_syn molybdenum cofactor synthesis domain. Th	90.61
COG2921	90	Uncharacterized conserved protein [Function unknow	85.62

>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]

Probab=100.00  E-value=7.6e-33  Score=221.37  Aligned_cols=140  Identities=24%  Similarity=0.280  Sum_probs=123.0

Q ss_pred             HHHHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHHH-HHHhHHhCCCCC
Q 031793            3 VFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWNC-LIELLRSGGLSL   76 (153)
Q Consensus         3 ~~~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~~-v~p~l~~~~~~~   76 (153)
                      ..++|++|++.++++|+|||++|+|| ++|+||+|+|||+.++    ++|+|||  ||+ |++||+. +.|++... + .
T Consensus       100 i~~~~~~r~~~~~~~~~K~A~~P~Ga-~~l~NpvG~APG~~v~~~~~~v~~lPG--vP~Em~~M~e~~~~~~l~~~-~-~  174 (255)
T COG1058         100 IEEKYAKRGREMTEANRKQAMLPEGA-EVLDNPVGTAPGFVVEGNGKNVYVLPG--VPSEMKPMFENVLLPLLTGR-F-P  174 (255)
T ss_pred             HHHHHHhcCCCCChhhhhhccCCCCC-EeCCCCCCCCCeeEEecCCeEEEEeCC--CCHHHHHHHHHHHHHHhhcc-C-C
Confidence            56788999999999999999999999 9999999999999997    7999999  999 9999985 67777654 2 2


Q ss_pred             CCCeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEEEccccCCeeEE---EEEEecCHHHHHHHHHHHHHHcccC
Q 031793           77 MEPYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLI---ISFEGKDQARIEAAIESLFKKFHRG  147 (153)
Q Consensus        77 ~~~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~---l~~~g~~~~~~~~~~~~l~~~l~~~  147 (153)
                      ..++++++++ +|++||.|++.|++++..+++++++|||+.+++..+   |+.+++|++.++++.+++..++.+.
T Consensus       175 ~~~~~~~~~~~~gi~ES~la~~L~~i~~~~~~~~i~s~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~  249 (255)
T COG1058         175 STKYYSRVLRVFGIGESSLAPTLKDLQDEQPNVTIASYPKDGEVRLRELVIRAEARDEEEADALLRWLEGRLRAR  249 (255)
T ss_pred             CCceEEEEEEEcCCChHHHHHHHHHHHhcCCCCEEEecCCCCceeccceEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence            2578999998 899999999999999999999999999998877554   8888899998888888887776543

>PRK00549 competence damage-inducible protein A; Provisional

Probab=99.98  E-value=1.4e-31  Score=227.82  Aligned_cols=145  Identities=16%  Similarity=0.172  Sum_probs=125.8

Q ss_pred             HHHHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHHH-HHHhHHhCCCCC
Q 031793            3 VFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWNC-LIELLRSGGLSL   76 (153)
Q Consensus         3 ~~~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~~-v~p~l~~~~~~~   76 (153)
                      +.+||+++++.|++.|.|||++|+|| ++|+||+||||||+++    .||+|||  ||+ |++||+. ++|+|++. +..
T Consensus        99 i~~~~~~~~~~~~~~n~kqA~~P~ga-~~l~N~~GtApG~~~~~~~~~i~~lPG--vP~Em~~m~~~~v~p~l~~~-~~~  174 (414)
T PRK00549         99 IEDYFAKRGREMTENNRKQALIPEGA-TVLPNPVGTAPGMIIEVDGKTYIVLPG--PPSELKPMFEEYVVPYLSSA-KGT  174 (414)
T ss_pred             HHHHHHHcCCCCChHHHHhhcCCCCC-EECcCCCCcCCeEEEEECCEEEEEeCC--CcHHHHHHHHHHhHHHHHhh-cCC
Confidence            34688888899999999999999999 9999999999999996    4999999  999 9999984 89999753 212


Q ss_pred             CCCeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEEEccccCCeeEEEEEEecCHHHH----HHHHHHHHHHcccCceee
Q 031793           77 MEPYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARI----EAAIESLFKKFHRGAFSE  151 (153)
Q Consensus        77 ~~~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~l~~~g~~~~~~----~~~~~~l~~~l~~~i~~~  151 (153)
                      ...+++++++ +|++||+|++.|.++...++++++|+||+.+.++|+|++++.|++.+    +++.++|+++|++++|+.
T Consensus       175 ~~~~~~~~l~~~gi~Es~l~~~L~~l~~~~~~v~ig~~~~~~~~~vrl~~~~~~~~~~~~~~~~~~~~i~~~lg~~~~~~  254 (414)
T PRK00549        175 GEVLYSRVLRFFGIGESQLATTLRDLIDNQTNPTIAPYAKDGEVTLRLTAKARSEEEAEKLIDPLEEEIRDRVGDYFYGY  254 (414)
T ss_pred             CceEEEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECccCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHhccceecC
Confidence            2357888887 89999999999999988888999999999877889999999987654    557778899999999974

>PRK03673 hypothetical protein; Provisional

Probab=99.97  E-value=5.6e-31  Score=222.64  Aligned_cols=144  Identities=18%  Similarity=0.123  Sum_probs=124.9

Q ss_pred             HHHHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHH-HHHHhHHhCCCCC
Q 031793            3 VFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWN-CLIELLRSGGLSL   76 (153)
Q Consensus         3 ~~~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~-~v~p~l~~~~~~~   76 (153)
                      +.+||+++++.|+++|+|||++|+|| ++|+||+|||||++++    .+|+|||  ||+ |++||+ +++|+|+.. +..
T Consensus       100 i~~~f~~~~~~m~~~n~kQA~~P~ga-~~l~N~~GtApG~~~~~~~~~i~~LPG--vP~Emk~M~~~~v~p~L~~~-~~~  175 (396)
T PRK03673        100 MERFFAERGRVMAPSNRKQAELPASA-EMIDNPVGTACGFALQLNRCLMFFTPG--VPSEFKVMVEQEILPRLRER-FSL  175 (396)
T ss_pred             HHHHHHhcCCCCChhHHhhccCCCCC-eeccCCCccCCcEEEEECCEEEEEECC--ChHHHHHHHHHHHHHHHHhh-cCC
Confidence            45788888999999999999999999 9999999999999996    3999999  999 999997 599999754 322


Q ss_pred             CCCeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEEEccccCCeeEEEEEEecCHHHHHHHHHHHHHHcccCceee
Q 031793           77 MEPYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSE  151 (153)
Q Consensus        77 ~~~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~l~~~g~~~~~~~~~~~~l~~~l~~~i~~~  151 (153)
                      ...++++.++ +|++||++++.|.++.. .+++++|+|++.+.++++|+.++.+.+.++++.+++++++++++|+.
T Consensus       176 ~~~~~~~~l~~~Gi~ES~l~~~l~~l~~-~~~~~i~~~~~~~~v~vrlt~~~~~~~~~~~~~~~i~~~lg~~v~~~  250 (396)
T PRK03673        176 PEPPLCLRLTTFGRSESDLAQSLDPLPL-PPGVVMGYRSSMPIIELKLTGPASQRQAMEQLWQQVRRVAGQSVIFE  250 (396)
T ss_pred             CCceEEEEEEECCCCHHHHHHHHHHHhc-CCCCEEeecCCCCeEEEEEEEccCCHHHHHHHHHHHHHHhCCcEEEe
Confidence            1346677787 79999999999999852 34899999999888899999999887668889999999999999974

>PRK03670 competence damage-inducible protein A; Provisional

Probab=99.97  E-value=1.1e-29  Score=203.68  Aligned_cols=131  Identities=19%  Similarity=0.191  Sum_probs=112.6

Q ss_pred             HHHHHhhCC-------CCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHHH-HHHhHH
Q 031793            4 FEFLCLQFD-------LILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWNC-LIELLR   70 (153)
Q Consensus         4 ~~~~~~~~~-------~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~~-v~p~l~   70 (153)
                      .++|+++++       .+++++.|||++|+|| ++|+|++|+||||+++    ++|+|||  ||+ |++||+. ++|+|.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~kmA~~P~ga-~~l~N~~g~ApG~~~~~~~~~v~~lPG--vP~e~~~M~~~~v~p~l~  177 (252)
T PRK03670        101 KEFYEELYKKGLIDDPTLNEARKKMAYLPEGA-EPLENTEGAAPGAYIEHKGTKIFVLPG--MPREMKAMLEKEVLPRLG  177 (252)
T ss_pred             HHHHHHhcccccccccccChHHHheeCCCCCC-EECCCCCCcCceEEEEECCeEEEEeCC--ChHHHHHHHHHHHHHhhc
Confidence            456665543       6789999999999999 9999999999999997    7999999  999 9999985 899884


Q ss_pred             hCCCCCCCCeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEEEccccCCeeEEEEEEecCHHHHHHHHHHHHHHc
Q 031793           71 SGGLSLMEPYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKF  144 (153)
Q Consensus        71 ~~~~~~~~~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~l~~~g~~~~~~~~~~~~l~~~l  144 (153)
                      .      .+++++.+. ++.+||+|++.|++++.+++ |+|||||+..+.+++|+++|.|++.++++.++|++..
T Consensus       178 ~------~~~~~~~~~~~~~~Es~la~~l~~~~~~~~-v~igSyP~~~~~~~~l~~~g~~~~~~~~a~~~l~~~~  245 (252)
T PRK03670        178 E------RKFVQKKFLAEITDESKLAPILEEALERFN-VKIHSSPKGFGKYIGIIIFAEDEEEIEKAVEFMEERG  245 (252)
T ss_pred             c------CCeEEEEEEeCCCCHHHHHHHHHHHHHHCC-ceEecCCCCCCCcEEEEEEECCHHHHHHHHHHHHHhC
Confidence            3      346677776 68999999999999999995 9999999833447899999999999999999997543

>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain

Probab=99.95  E-value=2.3e-27  Score=201.79  Aligned_cols=145  Identities=15%  Similarity=0.096  Sum_probs=123.2

Q ss_pred             HHHHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEE-c--e--EEEecCCCCch-hHHHHH-HHHHhHHhCCCC
Q 031793            3 VFEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKC-Q--N--VIILTATNVTE-LDKEWN-CLIELLRSGGLS   75 (153)
Q Consensus         3 ~~~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i-~--~--v~~LPG~~vP~-m~~m~~-~v~p~l~~~~~~   75 (153)
                      +.++|+++++.|+++|.|||++|+|| ++|+|++|+|||+++ .  +  |++|||  ||. |++||+ .+.|+|+.. +.
T Consensus        99 i~~~~~~~g~~~~~~n~kqA~~p~ga-~~l~N~~G~APG~~~~~~~~~~i~~LPG--~P~e~~~m~~~~v~p~l~~~-~~  174 (413)
T TIGR00200        99 IERYFHETGRVMAPNNRKQALLPAGA-EFLANPVGTAPGMFAVQLNRCLMLFTPG--VPSEFRVMVEHEALPRLRER-FS  174 (413)
T ss_pred             HHHHHHhcCCCCChHHHHhcCCCCCC-EECCCCCCCCCeeEEEecCCEEEEEeCC--CcHHHHHHHHHHhhHHHHHh-cC
Confidence            45678888999999999999999999 999999999999655 2  2  888999  999 999998 588999653 21


Q ss_pred             CCCCeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEEEccccCCeeEEEEEEecCHHH----HHHHHHHHHHHcccCcee
Q 031793           76 LMEPYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQAR----IEAAIESLFKKFHRGAFS  150 (153)
Q Consensus        76 ~~~~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~l~~~g~~~~~----~~~~~~~l~~~l~~~i~~  150 (153)
                      ....+++++++ +|++||++++.|.++...++++++++|++.++++++++.++.+.+.    ++++.++|++++++++|+
T Consensus       175 ~~~~~~~~~~~~~Gi~ES~l~~~l~~~~~~~~~~~~~~~~~~~~v~vrl~~~~~~~~~a~~~~~~~~~~i~~~lg~~~~~  254 (413)
T TIGR00200       175 LPQPIVSLVLRFFGIGESQLEADLADSLDTLTNPTGAPMAYRGEVPLRELKLTGPESEQQRAMEKLWLDIKRVAGQSVIG  254 (413)
T ss_pred             CCceEEEEEEEECCCCHHHHHHHHHHHHhcCCCCeEEEecCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHhCcceec
Confidence            22357788888 8999999999999998777889999999987889999999987654    355888999999999997


Q ss_pred             e
Q 031793          151 E  151 (153)
Q Consensus       151 ~  151 (153)
                      .
T Consensus       255 ~  255 (413)
T TIGR00200       255 E  255 (413)
T ss_pred             c
Confidence            3

cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species

>PRK01215 competence damage-inducible protein A; Provisional

Probab=99.94  E-value=2.2e-26  Score=185.83  Aligned_cols=135  Identities=16%  Similarity=0.145  Sum_probs=112.1

Q ss_pred             HHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHHH-HHHhHHhCCCCCCC
Q 031793            5 EFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWNC-LIELLRSGGLSLME   78 (153)
Q Consensus         5 ~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~~-v~p~l~~~~~~~~~   78 (153)
                      +||.+++..++++|.|||++|+|| ++|+|+.|||||+++.    .||+|||  ||. |++||+. ++|+|+..   ...
T Consensus       104 ~~~~~~~~~~~~~~~k~A~~P~ga-~~l~N~~Gtapg~~~~~~~~~i~~LPG--~P~e~~~m~~~~v~p~l~~~---~~~  177 (264)
T PRK01215        104 EKYEKRGIPLTPERKKMAMMPPGA-VPLENPVGTAPGILIEHGGKDIVALPG--VPREMEAIFENFVEPLLKNR---PPL  177 (264)
T ss_pred             HHHHhcCCCCChhHHheeeCCCCC-EecCCCCCcCCeEEEEECCEEEEEeCC--ChHHHHHHHHHHHHHHHhcc---CCC
Confidence            467777889999999999999999 9999999999999985    4999999  999 9999984 88999753   123


Q ss_pred             CeEEEEEE-eCCChhhhHHHHHHhhhhCCCcEEE-----EccccCCeeEEEEEEecCHHHH----HHHHHHHHHHcc
Q 031793           79 PYTSKSLT-TNLSDLEAAQPLSKLCLEFPDLHIG-----CYRKSRQGPLIISFEGKDQARI----EAAIESLFKKFH  145 (153)
Q Consensus        79 ~~~~~~l~-~g~~ES~l~~~L~~l~~~~~~v~ig-----~yp~~~~~~v~l~~~g~~~~~~----~~~~~~l~~~l~  145 (153)
                      .+++++++ +|++||+|++.|.++...++++++|     +|++.+++.|+|++++.+.+..    +++.+.++++|.
T Consensus       178 ~~~~~~~~~~Gi~Es~l~~~l~~l~~~~~~~~~~s~p~~~~~~~~~v~vrl~~~~~~~~~~~~~~~~~~~~i~~~~~  254 (264)
T PRK01215        178 KYYEDSILVEGVMESDLAPYVKELVKKYDRVYVKSHPKGYEVSKPILEIQIAGSGEREEEAKVKVEKVLEELKELIK  254 (264)
T ss_pred             cEEEEEEEECCCCHHHHHHHHHHHHHhCCCCEEecCccceecCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence            57888988 8999999999999998888999994     5566656789999988876544    446666666654

>cd00885 cinA Competence-damaged protein

Probab=99.69  E-value=4.1e-17  Score=124.11  Aligned_cols=65  Identities=22%  Similarity=0.240  Sum_probs=57.7

Q ss_pred             HHHHHhhCCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHH-HHHHhHHh
Q 031793            4 FEFLCLQFDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWN-CLIELLRS   71 (153)
Q Consensus         4 ~~~~~~~~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~-~v~p~l~~   71 (153)
                      -+||.+++..+++.+.|||++|+|| ++|+|+.|+|||++++    ++|+|||  ||+ |++||+ .+.|+|++
T Consensus        99 ~~~~~~~~~~~~~~~~r~a~~p~ga-~~i~N~~G~apg~~~~~~~~~i~~lPG--~P~e~~~m~~~~~~~~l~~  169 (170)
T cd00885          99 EARFARRGREMTEANLKQAMLPEGA-TLLPNPVGTAPGFSVEHNGKNVFLLPG--VPSEMKPMLEEEVLPRLRE  169 (170)
T ss_pred             HHHHHhcCCccChhhhheecCCCCC-EECcCCCCEeeEEEEEeCCeEEEEECC--ChHHHHHHHHHHHHHHHhc
Confidence            3456666777899999999999999 9999999999999997    6999999  999 999998 68898853

CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.

>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity

Probab=94.23  E-value=0.024  Score=41.38  Aligned_cols=34  Identities=21%  Similarity=0.090  Sum_probs=24.5

Q ss_pred             CCCcccEEEEc-----eEEEecCCCCch-hHHHHHH-HHHhHH
Q 031793           35 DKLLLPLIKCQ-----NVIILTATNVTE-LDKEWNC-LIELLR   70 (153)
Q Consensus        35 ~~GtAPG~~i~-----~v~~LPG~~vP~-m~~m~~~-v~p~l~   70 (153)
                      |.++++++.+.     .+|+|||  .|. ++.+|+. +.|.|+
T Consensus       103 p~~~~~~~~~~~~~~~~v~~LPG--~P~~~~~~~~~~v~P~L~  143 (144)
T PF00994_consen  103 PTGLAPGAYLSRKGGKPVFGLPG--NPVAAKVMLEVLVLPLLR  143 (144)
T ss_dssp             TCETEGGGGGTSSETTEEEEE-S--SHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeEEEeeCCCCcEEEEcCC--CHHHHHHHHHHHHHHhcC
Confidence            34566665553     4999999  999 9999986 459885

The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....

>smart00852 MoCF_biosynth Probable molybdopterin binding domain

Probab=91.19  E-value=0.26  Score=35.45  Aligned_cols=44  Identities=18%  Similarity=0.125  Sum_probs=32.8

Q ss_pred             cccceeccCCCceeeeCCCCcccEEEEceEEEecCCCCch-hHHHHH
Q 031793           18 PFQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTE-LDKEWN   63 (153)
Q Consensus        18 ~~rqA~vP~ga~~il~N~~GtAPG~~i~~v~~LPG~~vP~-m~~m~~   63 (153)
                      ..++++.|.+.+.+..|+.+.++|+.-+-||.|||  .|. +..+|+
T Consensus        89 ~~~~~~~Pg~~~~~~~~~~~~~~g~~~~~i~~LPG--~P~~~~~~~~  133 (135)
T smart00852       89 GFGEAMRPGGAPTVLANLSGTAPGFRGKLVFGLPG--SPVAARAMLE  133 (135)
T ss_pred             ChhhhhcccCCccccccccCcCCeEeCcEEEECCC--CHHHHHHHHH
Confidence            45678888776233458889899875345999999  998 887775

This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.

>TIGR00177 molyb_syn molybdenum cofactor synthesis domain

Probab=90.61  E-value=0.26  Score=36.11  Aligned_cols=33  Identities=6%  Similarity=-0.134  Sum_probs=26.6

Q ss_pred             eeeeCCCCcccEEEEce--EEEecCCCCch-hHHHHHH
Q 031793           30 ELLHHDKLLLPLIKCQN--VIILTATNVTE-LDKEWNC   64 (153)
Q Consensus        30 ~il~N~~GtAPG~~i~~--v~~LPG~~vP~-m~~m~~~   64 (153)
                      .+..+|-+++.+..+++  |+.|||  .|. ...+|+.
T Consensus       105 ~~~~~PG~~~~~~~~~~~~v~~LPG--~P~aa~~~~~~  140 (144)
T TIGR00177       105 AVLSRPGKPATAGVRGGTLIFGLPG--NPVSALVTFEV  140 (144)
T ss_pred             hhhCCCCCceEEEEECCEEEEECCC--CHHHHHHHHHH
Confidence            55667888888777764  999999  998 9898874

The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.

>COG2921 Uncharacterized conserved protein [Function unknown]

Probab=85.62  E-value=5.9  Score=27.09  Aligned_cols=60  Identities=13%  Similarity=0.158  Sum_probs=44.1

Q ss_pred             EEEE-eCCChhhhHHHHHHhhhhC-CC---cEEEEccccCC--eeEEEEEEecCHHHHHHHHHHHHH
Q 031793           83 KSLT-TNLSDLEAAQPLSKLCLEF-PD---LHIGCYRKSRQ--GPLIISFEGKDQARIEAAIESLFK  142 (153)
Q Consensus        83 ~~l~-~g~~ES~l~~~L~~l~~~~-~~---v~ig~yp~~~~--~~v~l~~~g~~~~~~~~~~~~l~~  142 (153)
                      .+++ .|....++++.+-++..++ |+   .++..-|+..+  ..|+|++++.|.+.++.+.+.|.+
T Consensus        16 F~~KVmG~a~~~l~~~vv~vvqr~ap~~~~~~~~~k~SSkGnY~svsI~i~A~~~EQ~e~ly~eL~~   82 (90)
T COG2921          16 FTYKVMGAAGPELEDQVVEVVQRHAPGDYTPRVSWKPSSKGNYLSVSITIRATNIEQVEALYRELRK   82 (90)
T ss_pred             ceeeehcccchhHHHHHHHHHHHHCCcccCceeeeccCCCCceEEEEEEEEECCHHHHHHHHHHHhh
Confidence            3455 6888888888888876666 42   34555565544  359999999999999999888875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3kbq_A	172	Protein TA0487; structural genomics, CINA, protein	99.75
3iwt_A	178	178AA long hypothetical molybdenum cofactor biosy	96.53
1uuy_A	167	CNX1, molybdopterin biosynthesis CNX1; chelatase,	95.15
2pbq_A	178	Molybdenum cofactor biosynthesis MOG; molybdopteri	94.18
2is8_A	164	Molybdopterin biosynthesis enzyme, MOAB; globular	93.86
2g2c_A	167	Putative molybdenum cofactor biosynthesis protein;	93.08
1y5e_A	169	Molybdenum cofactor biosynthesis protein B; struct	92.53
1mkz_A	172	Molybdenum cofactor biosynthesis protein B; MAD, W	87.24
1jlj_A	189	Gephyrin; globular alpha/beta fold, structural pro	86.61

>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}

Probab=99.75  E-value=7.6e-19  Score=132.85  Aligned_cols=66  Identities=15%  Similarity=0.222  Sum_probs=55.5

Q ss_pred             hHHHHHHhh--CCCCCcccccceeccCCCceeeeCCCCcccEEEEc----eEEEecCCCCch-hHHHHHHHHHhHH
Q 031793            2 EVFEFLCLQ--FDLILGFPFQMALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTE-LDKEWNCLIELLR   70 (153)
Q Consensus         2 ~~~~~~~~~--~~~~~~~~~rqA~vP~ga~~il~N~~GtAPG~~i~----~v~~LPG~~vP~-m~~m~~~v~p~l~   70 (153)
                      |++++++++  ++.++++++|||++|+|| ++|+|++|+|||++++    ++|+|||  ||+ |++||+.+.|+|.
T Consensus        97 e~~~~i~~~~~~~~~~~~~~k~A~~P~ga-~~l~N~~g~apG~~~~~~~~~v~~lPG--vP~e~~~m~~~~~~~~~  169 (172)
T 3kbq_A           97 DALAMIKKKYGQADLTPQRLKMAKIPPSC-RPIENPVGTAPGLICAVGGKKVIILPG--VPKEMEALLKAMEKDII  169 (172)
T ss_dssp             HHHHHHHHHHC---CCHHHHGGGEECTTE-EEECCSSSSSCEEEEEETTEEEEEECS--SHHHHHHHHHHTHHHHC
T ss_pred             HHHHHHHHHHcCCCCChHHHhhccCCCCC-EECcCCCCcCCeEEEEECCeEEEEeCC--CHHHHHHHHHHHHhhcC
Confidence            345544443  668999999999999999 9999999999999996    6999999  999 9999999999883

>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}

Probab=96.53  E-value=0.00062  Score=50.45  Aligned_cols=46  Identities=9%  Similarity=0.080  Sum_probs=31.4

Q ss_pred             ccceeccCCCceeeeCCCCcccEEEEceEEEecCCCCch-hHHHHH-HHHHhHH
Q 031793           19 FQMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTE-LDKEWN-CLIELLR   70 (153)
Q Consensus        19 ~rqA~vP~ga~~il~N~~GtAPG~~i~~v~~LPG~~vP~-m~~m~~-~v~p~l~   70 (153)
                      .+++..+.+| .+..|..|++.|-   -||+|||  +|. |+.||+ .++|.|.
T Consensus       123 ~~~~~~~~~a-~~~~~~~G~~~~~---~i~~LPG--~P~~~~~~~~~~v~P~L~  170 (178)
T 3iwt_A          123 FNDPEVKAAA-YLTKASAGIIGKK---IVYLLPG--SPDAVKLALKELILPEVG  170 (178)
T ss_dssp             HTSTTTGGGG-GGCCCEEEEETTE---EEEEECS--CHHHHHHHHHHTHHHHHH
T ss_pred             hccccccccc-cccccceeeECCE---EEEECCC--CHHHHHHHHHHHHHHHHH
Confidence            3445556666 5555544544332   2899999  999 999997 4788874

>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A

Probab=95.15  E-value=0.0044  Score=45.53  Aligned_cols=49  Identities=12%  Similarity=0.156  Sum_probs=36.2

Q ss_pred             ccceeccCCCceeeeCCCC--cccEEEEc--eEEEecCCCCch-hHHHHHHHHHhHHh
Q 031793           19 FQMALLPEGTTELLHHDKL--LLPLIKCQ--NVIILTATNVTE-LDKEWNCLIELLRS   71 (153)
Q Consensus        19 ~rqA~vP~ga~~il~N~~G--tAPG~~i~--~v~~LPG~~vP~-m~~m~~~v~p~l~~   71 (153)
                      .++++++.|. .+.+|..+  +++|+ +.  -||.|||  .|. +..+|+.+.|.|+.
T Consensus       104 ~~~~~~~~g~-~~~Pg~~~sr~~~G~-~~~~~v~~LPG--~P~s~~~~~~~~~P~L~~  157 (167)
T 1uuy_A          104 LLFVMMQESL-KITPFAMLARSAAGI-RGSTLIINMPG--NPNAVAECMEALLPALKH  157 (167)
T ss_dssp             HHHHHHHHHH-HHCGGGGGCCCCEEE-ETTEEEEEECS--STTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccc-ccCCCCcccceeEEE-ECCEEEEECCC--CHHHHHHHHHHHHHHHHH
Confidence            3445677777 77777654  68887 34  3999999  999 99999876687743

>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A

Probab=94.18  E-value=0.049  Score=40.31  Aligned_cols=34  Identities=9%  Similarity=0.014  Sum_probs=26.2

Q ss_pred             CCCCcccEEEEc--eEEEecCCCCch-hHHHHHHH---HHhHHh
Q 031793           34 HDKLLLPLIKCQ--NVIILTATNVTE-LDKEWNCL---IELLRS   71 (153)
Q Consensus        34 N~~GtAPG~~i~--~v~~LPG~~vP~-m~~m~~~v---~p~l~~   71 (153)
                      ++.|+| |+ +.  .||.|||  .|. ++.||+.+   +|++..
T Consensus       118 lsrg~a-g~-~~~~~v~~LPG--~P~~~~~~~~~~~~v~p~l~~  157 (178)
T 2pbq_A          118 LSRQTA-GI-RGSCLIVNLPG--KPQSIKVCLDAVMPAIPYCID  157 (178)
T ss_dssp             GCCCCE-EE-ETTEEEEEECS--SHHHHHHHHHHHGGGHHHHHH
T ss_pred             ccccee-ee-ECCEEEEECCC--CHHHHHHHHHHHHHHHHHHHH
Confidence            466777 66 44  3999999  999 99999864   788754

>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A

Probab=93.86  E-value=0.092  Score=38.22  Aligned_cols=23  Identities=9%  Similarity=0.213  Sum_probs=19.7

Q ss_pred             eEEEecCCCCch-hHHHHHHHHHhHH
Q 031793           46 NVIILTATNVTE-LDKEWNCLIELLR   70 (153)
Q Consensus        46 ~v~~LPG~~vP~-m~~m~~~v~p~l~   70 (153)
                      .||.|||  .|. +..||+.++|+|.
T Consensus       124 ~v~~LPG--~P~~~~~~~~~v~p~l~  147 (164)
T 2is8_A          124 LILNLPG--SPKGARESLEAVLPVLP  147 (164)
T ss_dssp             EEEEECS--SHHHHHHHHHHHGGGHH
T ss_pred             EEEECCC--CHHHHHHHHHHHHHHHH
Confidence            4999999  999 9999987778764

>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1

Probab=93.08  E-value=0.058  Score=39.45  Aligned_cols=43  Identities=9%  Similarity=0.164  Sum_probs=26.0

Q ss_pred             cceeccCCCceeeeCCCCcccEEEEceEEEecCCCCch-hHHHHHHHHHhHH
Q 031793           20 QMALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTE-LDKEWNCLIELLR   70 (153)
Q Consensus        20 rqA~vP~ga~~il~N~~GtAPG~~i~~v~~LPG~~vP~-m~~m~~~v~p~l~   70 (153)
                      +||++|.+. -=+.+..+.  |   ..||.|||  .|. ++.||+.+.|+|+
T Consensus       115 p~a~l~r~~-aG~~~~~~~--~---~~v~~LPG--~P~~~~~~~~~v~P~L~  158 (167)
T 2g2c_A          115 HLAGLSRGI-VGVTGRDDH--A---ALIVNAPS--SSGGITDTWAVISPVIP  158 (167)
T ss_dssp             ---CCCCCC-EEESCSSTT--C---CEEEEECS--SHHHHHHHHHHHGGGHH
T ss_pred             Cceeeeccc-cceecCCCC--C---EEEEECCC--CHHHHHHHHHHHHHHHH
Confidence            678787774 222221100  0   23899999  999 9999996678774

>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1

Probab=92.53  E-value=0.097  Score=38.29  Aligned_cols=42  Identities=10%  Similarity=0.056  Sum_probs=29.5

Q ss_pred             cCCCceeeeCCCCcccEEEEc-eEEEecCCCCch-hHHHHH-HHHHhHHh
Q 031793           25 PEGTTELLHHDKLLLPLIKCQ-NVIILTATNVTE-LDKEWN-CLIELLRS   71 (153)
Q Consensus        25 P~ga~~il~N~~GtAPG~~i~-~v~~LPG~~vP~-m~~m~~-~v~p~l~~   71 (153)
                      ..|. ..+ +..++| |+.=. .||+|||  .|. ++.||+ .+.|+|+.
T Consensus       117 ~pG~-~~~-~~r~~a-G~~~~~~v~~LPG--~P~~~~~~~~~~v~p~L~~  161 (169)
T 1y5e_A          117 DIGS-SAM-LSRAIG-GTIGRKVVFSMPG--SSGAVRLAMNKLILPELGH  161 (169)
T ss_dssp             SSGG-GGG-GCCCEE-EEETTEEEEEECS--SHHHHHHHHHHTHHHHHHH
T ss_pred             CCCc-cee-ccccee-EEECCEEEEECCC--CHHHHHHHHHHHHHHHHHH
Confidence            3455 443 566666 76322 4999999  999 999998 57888753

>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B

Probab=87.24  E-value=0.32  Score=35.65  Aligned_cols=24  Identities=13%  Similarity=0.342  Sum_probs=20.5

Q ss_pred             eEEEecCCCCch-hHHHHHH-HHHhHHh
Q 031793           46 NVIILTATNVTE-LDKEWNC-LIELLRS   71 (153)
Q Consensus        46 ~v~~LPG~~vP~-m~~m~~~-v~p~l~~   71 (153)
                      .||+|||  .|. ++.||+. +.|+|..
T Consensus       132 ~v~~LPG--~P~~~~~~~~~~v~p~L~~  157 (172)
T 1mkz_A          132 LILAMPG--STKACRTAWENIIAPQLDA  157 (172)
T ss_dssp             EEEEECS--SHHHHHHHHHHTHHHHHCT
T ss_pred             EEEECCC--CHHHHHHHHHHHHHHHHhh
Confidence            3899999  999 9999985 7898854

>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A

Probab=86.61  E-value=0.37  Score=35.95  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=21.4

Q ss_pred             EEEEc-eEEEecCCCCch-hHHHHHHHHHhHH
Q 031793           41 LIKCQ-NVIILTATNVTE-LDKEWNCLIELLR   70 (153)
Q Consensus        41 G~~i~-~v~~LPG~~vP~-m~~m~~~v~p~l~   70 (153)
                      |+.=+ -|+.|||  .|. +..||+.+.|+|.
T Consensus       134 G~~~~~~v~~LPG--~P~s~~~~~~~v~P~L~  163 (189)
T 1jlj_A          134 GIRGKTLIINLPG--SKKGSQECFQFILPALP  163 (189)
T ss_dssp             EEETTEEEEEECS--SHHHHHHHHHHHGGGHH
T ss_pred             EEECCeEEEECCC--CHHHHHHHHHHHHHHHH
Confidence            65312 3899999  999 9999997778774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1uuya_	161	Plant CNX1 G domain {Mouse-ear cress (Arabidopsis	89.12
d1wjwa_	112	Phosphoacetylglucosamine mutase {Mouse (Mus muscul	87.64
d1jlja_	169	Gephyrin N-terminal domain {Human (Homo sapiens) [	87.58
d2g2ca1	163	Putative molybdenum cofactor biosynthesis protein	86.19

>d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Molybdenum cofactor biosynthesis proteins
superfamily: Molybdenum cofactor biosynthesis proteins
family: MogA-like
domain: Plant CNX1 G domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.12  E-value=0.24  Score=34.29  Aligned_cols=22  Identities=14%  Similarity=0.280  Sum_probs=19.4

Q ss_pred             EEEecCCCCch-hHHHHHHHHHhHH
Q 031793           47 VIILTATNVTE-LDKEWNCLIELLR   70 (153)
Q Consensus        47 v~~LPG~~vP~-m~~m~~~v~p~l~   70 (153)
                      ||+|||  .|. ++.+|+.++|.|.
T Consensus       132 if~LPG--~P~a~~~~l~~i~p~l~  154 (161)
T d1uuya_         132 IINMPG--NPNAVAECMEALLPALK  154 (161)
T ss_dssp             EEEECS--STTHHHHHHHHHHHHHH
T ss_pred             EEECCC--CHHHHHHHHHHHHHHHH
Confidence            899999  999 9999988878774

>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoacetylglucosamine mutase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.64  E-value=1  Score=29.28  Aligned_cols=54  Identities=6%  Similarity=-0.034  Sum_probs=42.4

Q ss_pred             hhhHHHHHHhhhhCCCcEEEEccccCCeeEEEEEEecCHHHHHHHHHHHHHHcc
Q 031793           92 LEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESLFKKFH  145 (153)
Q Consensus        92 S~l~~~L~~l~~~~~~v~ig~yp~~~~~~v~l~~~g~~~~~~~~~~~~l~~~l~  145 (153)
                      ..+.+.+..+...+++-.+-..|+..+--+||.+++.+.+.+++....+.+.+.
T Consensus        41 ~~lq~~Idgi~~~~~~grvlIRpSGTEp~iRi~vEa~~~~~~~~i~~~i~~lv~   94 (112)
T d1wjwa_          41 PGLQEAINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVF   94 (112)
T ss_dssp             TTHHHHHHHHHHHSSSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCceEEEEEeCCCCceEEEEEecCCHHHHHHHHHHHHHHHH
Confidence            345677888877888878888887666679999999999988888777776654

>d1jlja_ c.57.1.1 (A:) Gephyrin N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Molybdenum cofactor biosynthesis proteins
superfamily: Molybdenum cofactor biosynthesis proteins
family: MogA-like
domain: Gephyrin N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.58  E-value=0.14  Score=35.30  Aligned_cols=21  Identities=14%  Similarity=0.281  Sum_probs=18.0

Q ss_pred             EEEecCCCCch-hHHHHHHHHHhH
Q 031793           47 VIILTATNVTE-LDKEWNCLIELL   69 (153)
Q Consensus        47 v~~LPG~~vP~-m~~m~~~v~p~l   69 (153)
                      ||.|||  .|. ++.||+.++|.+
T Consensus       129 i~~LPG--~P~~~~~~~~~vlP~l  150 (169)
T d1jlja_         129 IINLPG--SKKGSQECFQFILPAL  150 (169)
T ss_dssp             EEEECS--SHHHHHHHHHHHGGGH
T ss_pred             EEECCC--CHHHHHHHHHHHHHhH
Confidence            889999  999 999998776665

>d2g2ca1 c.57.1.1 (A:1-163) Putative molybdenum cofactor biosynthesis protein DIP0503 {Corynebacterium diphtheriae [TaxId: 1717]}

class: Alpha and beta proteins (a/b)
fold: Molybdenum cofactor biosynthesis proteins
superfamily: Molybdenum cofactor biosynthesis proteins
family: MogA-like
domain: Putative molybdenum cofactor biosynthesis protein DIP0503
species: Corynebacterium diphtheriae [TaxId: 1717]

Probab=86.19  E-value=0.18  Score=34.73  Aligned_cols=21  Identities=5%  Similarity=0.403  Sum_probs=17.8

Q ss_pred             EEEecCCCCch-hHHHHHHHHHhH
Q 031793           47 VIILTATNVTE-LDKEWNCLIELL   69 (153)
Q Consensus        47 v~~LPG~~vP~-m~~m~~~v~p~l   69 (153)
                      |+.|||  .|. ++.+|+.+.|.|
T Consensus       133 I~~LPG--~P~~~~~~~~~l~p~l  154 (163)
T d2g2ca1         133 IVNAPS--SSGGITDTWAVISPVI  154 (163)
T ss_dssp             EEEECS--SHHHHHHHHHHHGGGH
T ss_pred             EEECCC--CHHHHHHHHHHHHHHH
Confidence            889999  999 999998666655