Citrus Sinensis ID: 031826

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mrvfagtpgtaTGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYdlghcsvdneCQKYQASVGLAICCCFTIATSSLIMLWLLASG
Flexible Loop (DISEMBL)
mrvfagtpgtatGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Low Complexity Region (SEG)
MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVtatlslaaasasaGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Disordered region (IsUnstruct)
******TPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLL***
Disordered Region (DISOPRED)
*****GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Disordered Region (DISEMBL)
********GTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Disordered Region (DISPRO)
******TPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQASVGLAICCCFTIATSSLIMLWLLASG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q8L7R5	152	CASP-like protein At3g232	yes	no	0.960	0.960	0.726	4e-54
Q945M8	154	CASP-like protein At3g538	no	no	0.993	0.980	0.529	8e-38
Q6K478	154	CASP-like protein Os09g02	yes	no	0.993	0.980	0.555	2e-37
B8BD96	154	CASP-like protein OsI_305	N/A	no	0.993	0.980	0.555	2e-37
P0DI71	178	CASP-like protein 3 OS=Gi	N/A	no	0.986	0.842	0.516	7e-36
B6T990	154	CASP-like protein 13 OS=Z	N/A	no	0.993	0.980	0.535	3e-35
Q9LZM5	152	CASP-like protein At5g020	no	no	0.980	0.980	0.529	2e-34
Q5N794	153	CASP-like protein Os01g08	no	no	0.967	0.960	0.525	3e-34
B8AC36	153	CASP-like protein OsI_044	N/A	no	0.967	0.960	0.525	3e-34
D5ACW4	182	CASP-like protein 11 (Fra	N/A	no	0.855	0.714	0.564	1e-33

>sp|Q8L7R5|CSPLG_ARATH CASP-like protein At3g23200 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1

 Score =  209 bits (533), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 121/146 (82%)

Query: 6   GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
           GTPGT TGL LRI+QC+FAAGSI+ M ++  FF+FTAFCYLIAAMGLQVIWSFGLA++D 
Sbjct: 6   GTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDT 65

Query: 66  YAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQ 125
           +A+V+KK L SPVL+SLFVVGDWVT+TLSLA AS+SAGIT LYF DLG CS + EC KYQ
Sbjct: 66  FALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQ 125

Query: 126 ASVGLAICCCFTIATSSLIMLWLLAS 151
            SV LA  C  TIA SSL  LWLLAS
Sbjct: 126 LSVALAFLCWITIAVSSLTTLWLLAS 151

Arabidopsis thaliana (taxid: 3702)

>sp|Q945M8|CSPLI_ARATH CASP-like protein At3g53850 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1

 Score =  155 bits (392), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 81/153 (52%), Positives = 103/153 (67%), Gaps = 2/153 (1%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G PGT  GL LRI QC  AA SI  M S   F   TAFCYLIA+MGLQ++WSFGL
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A +D YA+  KK L +P+L+SLFVVGDWVTA LSLAAA +SAG+  LY  D+ +C+  ++
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
             C +Y+ +V L+      IA SS +  W+LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

Arabidopsis thaliana (taxid: 3702)

>sp|Q6K478|CSPLQ_ORYSJ CASP-like protein Os09g0249400 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/153 (55%), Positives = 114/153 (74%), Gaps = 2/153 (1%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G+PGT +G+ LR++QC+FA  S+ +MAS + F N+TAFCYLIA+MGLQ++WSFGL
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A +D Y++  K+ LH+PVL+SLFVVGDWVTA LS AAASASAG+T L+  D+  C +  +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
             C +Y+ SV LA      IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8BD96|CSPLQ_ORYSI CASP-like protein OsI_30532 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/153 (55%), Positives = 114/153 (74%), Gaps = 2/153 (1%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G+PGT +G+ LR++QC+FA  S+ +MAS + F N+TAFCYLIA+MGLQ++WSFGL
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A +D Y++  K+ LH+PVL+SLFVVGDWVTA LS AAASASAG+T L+  D+  C +  +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
             C +Y+ SV LA      IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

Oryza sativa subsp. indica (taxid: 39946)

>sp|P0DI71|CSPL3_GINBI CASP-like protein 3 OS=Ginkgo biloba GN=gba_locus_13664 PE=3 SV=1

 Score =  149 bits (375), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 101/151 (66%), Gaps = 1/151 (0%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G PGT  GL LR+ Q +FAA +I  M +   F N+TAFCYL+AAM LQ +WSF L
Sbjct: 28  MKELPGMPGTIGGLALRVGQFLFAAAAIVIMVTGDEFTNYTAFCYLVAAMSLQFLWSFML 87

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A++D YA++ K+ L + VL+SLFVVGDWVTATLSLAAA ++AG+T L+  DL +C     
Sbjct: 88  AILDTYALLIKRGLRNSVLLSLFVVGDWVTATLSLAAACSTAGVTVLFDNDLNYCG-QMH 146

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
           C +YQ S  +A      I  SSL+  WL AS
Sbjct: 147 CHRYQLSAAMAFLSWLLIGMSSLLTFWLWAS 177

Ginkgo biloba (taxid: 3311)

>sp|B6T990|CSPLI_MAIZE CASP-like protein 13 OS=Zea mays PE=2 SV=1

 Score =  147 bits (371), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 111/153 (72%), Gaps = 2/153 (1%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G+PGT +G+ LR++QC+ A  S+ +MA+ + F N+TAFCYLIA+MGLQ++WSFGL
Sbjct: 1   MKDVVGSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A +D Y++  K+ LH+PVL+SLFVVGDWVTA LS AAASASAG+T L+  D+  C +  +
Sbjct: 61  ACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
             C +Y  SV LA      IATS++ M WLL S
Sbjct: 121 LSCGRYALSVVLAFITWSFIATSAVSMFWLLPS 153

Zea mays (taxid: 4577)

>sp|Q9LZM5|CSPLU_ARATH CASP-like protein At5g02060 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 103/151 (68%), Gaps = 2/151 (1%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   G+PGT +GL LR+ QC  AA SI  M S++ F N+TAFC+L+A+MGLQ+IWSFGL
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDN- 119
           A +D YAI +K  L SP+L+SLF VGDWVTA L+LAAA +SAG+T L+  D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 120 -ECQKYQASVGLAICCCFTIATSSLIMLWLL 149
             C ++Q SVGL+    F  A SS  M W+L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

Arabidopsis thaliana (taxid: 3702)

>sp|Q5N794|CSPLR_ORYSJ CASP-like protein Os01g0847300 OS=Oryza sativa subsp. japonica GN=Os01g0847300 PE=2 SV=1

 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 9/156 (5%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           MR  AG+PGT +GL LR+ Q +FAA S+ + AS   F  +TAFCYLIA+MGLQ +WS GL
Sbjct: 1   MRELAGSPGTWSGLSLRVGQLVFAAASVCATASALGFAAYTAFCYLIASMGLQALWSLGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDN- 119
           A +D YA+  KK LHS VL+SLFVVGDWVTA LS AA+ ++AG+  L+  D+  C     
Sbjct: 61  ACLDCYALKFKKDLHSAVLLSLFVVGDWVTAILSFAASCSAAGVVVLFDRDIYACRNPQL 120

Query: 120 ECQKYQASVGLAICCCFT----IATSSLIMLWLLAS 151
            C +++    LAI C F      ATS+L+M WLLAS
Sbjct: 121 PCGRFE----LAIACAFLSWAFSATSALVMFWLLAS 152

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AC36|CSPLR_ORYSI CASP-like protein OsI_04425 OS=Oryza sativa subsp. indica GN=OsI_04425 PE=2 SV=1

 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 9/156 (5%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           MR  AG+PGT +GL LR+ Q +FAA S+ + AS   F  +TAFCYLIA+MGLQ +WS GL
Sbjct: 1   MRELAGSPGTWSGLSLRVGQLVFAAASVCATASALGFAAYTAFCYLIASMGLQALWSLGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDN- 119
           A +D YA+  KK LHS VL+SLFVVGDWVTA LS AA+ ++AG+  L+  D+  C     
Sbjct: 61  ACLDCYALKFKKDLHSAVLLSLFVVGDWVTAILSFAASCSAAGVVVLFDRDIYACRNPQL 120

Query: 120 ECQKYQASVGLAICCCFT----IATSSLIMLWLLAS 151
            C +++    LAI C F      ATS+L+M WLLAS
Sbjct: 121 PCGRFE----LAIACAFLSWAFSATSALVMFWLLAS 152

Oryza sativa subsp. indica (taxid: 39946)

>sp|D5ACW4|CSPLB_PICSI CASP-like protein 11 (Fragment) OS=Picea sitchensis PE=2 SV=2

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/131 (56%), Positives = 93/131 (70%), Gaps = 1/131 (0%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+   GTPGT  GL LR+ Q IFAA S+  M ++  F NFTAFCYL AAM LQ +WSF L
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A ID YA++ K+ L + +L+SLFVVGDWVTATLSLAAA ++AGIT L+  DL +C     
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCD-QMH 150

Query: 121 CQKYQASVGLA 131
           C++YQ S  +A
Sbjct: 151 CRRYQLSATMA 161

Picea sitchensis (taxid: 3332)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
388494166	152	unknown [Lotus japonicus]	1.0	1.0	0.723	3e-55
30686969	152	uncharacterized protein [Arabidopsis tha	0.960	0.960	0.726	2e-52
297831058	152	hypothetical protein ARALYDRAFT_898831 [	0.960	0.960	0.726	3e-52
255576822	152	conserved hypothetical protein [Ricinus	1.0	1.0	0.743	4e-51
225433045	152	PREDICTED: CASP-like protein At3g23200 i	1.0	1.0	0.756	4e-51
356535432	152	PREDICTED: CASP-like protein At3g23200-l	1.0	1.0	0.756	2e-50
356576462	152	PREDICTED: CASP-like protein At3g23200-l	1.0	1.0	0.756	2e-50
255640646	152	unknown [Glycine max]	1.0	1.0	0.743	5e-50
356534544	163	PREDICTED: CASP-like protein At3g23200-l	1.0	0.932	0.743	2e-49
217075402	152	unknown [Medicago truncatula] gi|3885152	1.0	1.0	0.638	4e-48

>gi|388494166|gb|AFK35149.1| unknown [Lotus japonicus]

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 126/152 (82%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT  GL LR+AQ IFAAGSIASM +T SFFNFTAFCYLIA+MGLQVIWSF L
Sbjct: 1   MKDFPGTPGTGLGLALRMAQFIFAAGSIASMTTTPSFFNFTAFCYLIASMGLQVIWSFML 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+V+KKVLH+P+L+SLFVVGDWVTA LSLAAAS+S GIT LYF+DLGHC     
Sbjct: 61  ALLDAYALVKKKVLHNPLLVSLFVVGDWVTAILSLAAASSSGGITVLYFHDLGHCRFGEG 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           C+KYQ SV LA      I+ SSLIMLW+LA+G
Sbjct: 121 CRKYQISVALAFLSWIPISISSLIMLWILAAG 152

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686969|ref|NP_188961.2| uncharacterized protein [Arabidopsis thaliana] gi|75154211|sp|Q8L7R5.1|CSPLG_ARATH RecName: Full=CASP-like protein At3g23200 gi|22135858|gb|AAM91511.1| ethylene responsive element binding protein, putative [Arabidopsis thaliana] gi|30102860|gb|AAP21348.1| At3g23220 [Arabidopsis thaliana] gi|332643213|gb|AEE76734.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 121/146 (82%)

Query: 6   GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
           GTPGT TGL LRI+QC+FAAGSI+ M ++  FF+FTAFCYLIAAMGLQVIWSFGLA++D 
Sbjct: 6   GTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDT 65

Query: 66  YAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQ 125
           +A+V+KK L SPVL+SLFVVGDWVT+TLSLA AS+SAGIT LYF DLG CS + EC KYQ
Sbjct: 66  FALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQ 125

Query: 126 ASVGLAICCCFTIATSSLIMLWLLAS 151
            SV LA  C  TIA SSL  LWLLAS
Sbjct: 126 LSVALAFLCWITIAVSSLTTLWLLAS 151

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831058|ref|XP_002883411.1| hypothetical protein ARALYDRAFT_898831 [Arabidopsis lyrata subsp. lyrata] gi|297329251|gb|EFH59670.1| hypothetical protein ARALYDRAFT_898831 [Arabidopsis lyrata subsp. lyrata]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 121/146 (82%)

Query: 6   GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
           GTPGT TGL LRI+QC+FAAGSI+ M ++  FF+FTAFCYLIAAMGLQVIWSFGLA++D 
Sbjct: 6   GTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDT 65

Query: 66  YAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNECQKYQ 125
           +A+V+KK L SPVL+SLFVVGDWVT+TLSLA AS+SAGIT LYF DLG CS + EC KYQ
Sbjct: 66  FALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQ 125

Query: 126 ASVGLAICCCFTIATSSLIMLWLLAS 151
            SV LA  C  TIA SSL  LWLLAS
Sbjct: 126 LSVALAFLCWITIAISSLTTLWLLAS 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576822|ref|XP_002529297.1| conserved hypothetical protein [Ricinus communis] gi|223531221|gb|EEF33066.1| conserved hypothetical protein [Ricinus communis]

 Score =  206 bits (523), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 131/152 (86%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ FAGTPGT T L LRI+QCIFAAGSI +MA+T +FFNFTAFCYLIA+MGLQVIWS GL
Sbjct: 1   MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAFCYLIASMGLQVIWSLGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+++KKVLH+ +L+SLFVVGDWVTATLSLAAASASAGIT L F+D+GHC+   E
Sbjct: 61  ALLDAYALIRKKVLHNSILVSLFVVGDWVTATLSLAAASASAGITVLLFHDVGHCNYLTE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKYQ SV LA     TIA SSLIMLW+LA+G
Sbjct: 121 CQKYQMSVALAFLSWITIAISSLIMLWILAAG 152

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433045|ref|XP_002284723.1| PREDICTED: CASP-like protein At3g23200 isoform 1 [Vitis vinifera] gi|296083617|emb|CBI23606.3| unnamed protein product [Vitis vinifera]

 Score =  206 bits (523), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 128/152 (84%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT TGL LRI+QC+FAAGSIASMA+T SFF+ TAFCYLIA+MGLQVIWSFGL
Sbjct: 1   MKDFPGTPGTWTGLILRISQCMFAAGSIASMATTSSFFSVTAFCYLIASMGLQVIWSFGL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           A +DAYA+V+KKVLH+PVL+SLFVVGDWVTATLSLAAASASAGIT LY+ D G C    E
Sbjct: 61  AFLDAYALVKKKVLHNPVLVSLFVVGDWVTATLSLAAASASAGITVLYYSDFGDCDFGKE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKYQ SV LA      IATSSLIM WLLA+G
Sbjct: 121 CQKYQISVALAFLSWIMIATSSLIMFWLLAAG 152

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535432|ref|XP_003536249.1| PREDICTED: CASP-like protein At3g23200-like [Glycine max]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 128/152 (84%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT  GL LRI+Q +FAAGSIASMA+T SFFNFTAFCYLIA+MGLQVIWSF L
Sbjct: 1   MKDFPGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAFCYLIASMGLQVIWSFVL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+V+KKVLH+ VL+SLFVVGDWVTATLSLAAAS+SAGIT LYF DLGHC    E
Sbjct: 61  ALLDAYALVKKKVLHNAVLVSLFVVGDWVTATLSLAAASSSAGITVLYFNDLGHCHFGEE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKY  SV LA    F I+ SSLIMLWLLA+G
Sbjct: 121 CQKYLISVALAFLSWFPISISSLIMLWLLAAG 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576462|ref|XP_003556350.1| PREDICTED: CASP-like protein At3g23200-like [Glycine max]

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 128/152 (84%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT  GL LRI+Q +FAAGSIASMA+T SFFNFTAFCYLIA+MGL VIWSF L
Sbjct: 1   MKDFPGTPGTGLGLALRISQFVFAAGSIASMATTPSFFNFTAFCYLIASMGLLVIWSFVL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+V+KKVLH+ VL+SLFVVGDWVTATLSLAAAS+SAGIT LYF DLGHC    E
Sbjct: 61  ALLDAYALVKKKVLHNAVLVSLFVVGDWVTATLSLAAASSSAGITVLYFNDLGHCHFGEE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKYQ SV LA    F I+ SSLIMLWLLA+G
Sbjct: 121 CQKYQISVALAFLSWFPISISSLIMLWLLAAG 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640646|gb|ACU20608.1| unknown [Glycine max]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 126/152 (82%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT  GL LRI+Q +FAAGSIASMA+T SFFNFTAFCYLIA+MGL VIWSF L
Sbjct: 1   MKDFPGTPGTGLGLALRISQFVFAAGSIASMATTPSFFNFTAFCYLIASMGLLVIWSFVL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+V+KKVLH+ VL+SLFVVGDWVTA LSLAAAS+SAGIT LYF  LGHC    E
Sbjct: 61  ALLDAYALVKKKVLHNAVLVSLFVVGDWVTAALSLAAASSSAGITVLYFNGLGHCHFGEE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKYQ SV LA    F I+ SSLIMLWLLA+G
Sbjct: 121 CQKYQISVALAFLSWFPISISSLIMLWLLAAG 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534544|ref|XP_003535813.1| PREDICTED: CASP-like protein At3g23200-like [Glycine max]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 127/152 (83%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F+GTPGT  GL LRI+Q IFAAGSIASMA+T SFFN TAFCYLIA+MGLQ+IWSF L
Sbjct: 1   MKDFSGTPGTVLGLVLRISQFIFAAGSIASMATTTSFFNLTAFCYLIASMGLQIIWSFVL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+D YA+V+KKVL +PVLISLFVVGDWVTATLSLAAASASAGIT LYF+DLGHC    E
Sbjct: 61  ALMDLYALVRKKVLLNPVLISLFVVGDWVTATLSLAAASASAGITVLYFHDLGHCHFGEE 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           CQKYQ SV  A     + + SSLIMLWLLA+G
Sbjct: 121 CQKYQISVAFAFLSWISTSISSLIMLWLLAAG 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075402|gb|ACJ86061.1| unknown [Medicago truncatula] gi|388515251|gb|AFK45687.1| unknown [Medicago truncatula]

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/152 (63%), Positives = 116/152 (76%)

Query: 1   MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
           M+ F GTPGT  GL LR++Q IFA  SI  M +T SF + TAFCYL+AAMGLQ IWSF L
Sbjct: 1   MKEFPGTPGTVLGLILRMSQFIFATPSIGYMVTTTSFMDITAFCYLVAAMGLQAIWSFLL 60

Query: 61  ALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLGHCSVDNE 120
           AL+DAYA+V+KKVLH+P L+SL++VGDWV+ATLSLAAA +SAGI  LYF+DLGHC    +
Sbjct: 61  ALMDAYAVVRKKVLHNPALVSLYLVGDWVSATLSLAAACSSAGIIVLYFHDLGHCYFGEK 120

Query: 121 CQKYQASVGLAICCCFTIATSSLIMLWLLASG 152
           C+ YQ SVG A       + SSLIMLWLLA G
Sbjct: 121 CRSYQISVGFAFLSWIPTSISSLIMLWLLAGG 152

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2086258	152	AT3G23200 "AT3G23200" [Arabido	0.960	0.960	0.657	1.6e-47
TAIR|locus:2185103	152	AT5G02060 "AT5G02060" [Arabido	0.980	0.980	0.470	5.2e-33
TAIR|locus:2084445	154	AT3G53850 "AT3G53850" [Arabido	0.993	0.980	0.464	6.7e-33
TAIR|locus:2057497	179	AT2G28370 "AT2G28370" [Arabido	0.953	0.810	0.438	1.2e-26
TAIR|locus:2061743	180	AT2G37200 "AT2G37200" [Arabido	0.980	0.827	0.350	1.3e-22
TAIR|locus:504956317	152	AT1G49405 "AT1G49405" [Arabido	0.953	0.953	0.315	1.1e-18
TAIR|locus:2077962	154	AT3G50810 "AT3G50810" [Arabido	0.960	0.948	0.321	6e-16
TAIR|locus:1006230287	152	AT4G37235 "AT4G37235" [Arabido	0.907	0.907	0.310	5.4e-15

TAIR|locus:2086258 AT3G23200 "AT3G23200" [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 96/146 (65%), Positives = 109/146 (74%)

Query:     6 GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
             GTPGT TGL LRI+QC+FAAGSI+ M ++  FF+FTAFCYLIAAMGLQVIWSFGLA++D 
Sbjct:     6 GTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDT 65

Query:    66 YAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNECQKYQ 125
             +A+V+KK L SPVL+SLFVVGDWV             GIT LYF DLG CS + EC KYQ
Sbjct:    66 FALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQ 125

Query:   126 ASVGLAICCCFTIATSSLIMLWLLAS 151
              SV LA  C  TIA SSL  LWLLAS
Sbjct:   126 LSVALAFLCWITIAVSSLTTLWLLAS 151

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185103 AT5G02060 "AT5G02060" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 71/151 (47%), Positives = 92/151 (60%)

Query:     1 MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
             M+   G+PGT +GL LR+ QC  AA SI  M S++ F N+TAFC+L+A+MGLQ+IWSFGL
Sbjct:     1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query:    61 ALIDAYAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDN- 119
             A +D YAI +K  L SP+L+SLF VGDWV             G+T L+  D   C     
Sbjct:    61 ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query:   120 -ECQKYQASVGLAICCCFTIATSSLIMLWLL 149
               C ++Q SVGL+    F  A SS  M W+L
Sbjct:   121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2084445 AT3G53850 "AT3G53850" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 71/153 (46%), Positives = 92/153 (60%)

Query:     1 MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
             M+   G PGT  GL LRI QC  AA SI  M S   F   TAFCYLIA+MGLQ++WSFGL
Sbjct:     1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query:    61 ALIDAYAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNE 120
             A +D YA+  KK L +P+L+SLFVVGDWV             G+  LY  D+ +C+  ++
Sbjct:    61 ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query:   121 --CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
               C +Y+ +V L+      IA SS +  W+LAS
Sbjct:   121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057497 AT2G28370 "AT2G28370" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 64/146 (43%), Positives = 81/146 (55%)

Query:     6 GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
             G PGT  GL LR  Q +FAA ++  MAST  F + TAFCYL+AA GLQ +WS  LA++D 
Sbjct:    34 GMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDV 93

Query:    66 YAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNECQKYQ 125
             YAI+ K+ L +  L+SLF +GD V             GIT L   DL  C+  N C +++
Sbjct:    94 YAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNHCVQFE 152

Query:   126 ASVGLAICCCFTIATSSLIMLWLLAS 151
              S  LA    F    S L   W LAS
Sbjct:   153 TSTALAFISWFAALPSFLFNFWSLAS 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2061743 AT2G37200 "AT2G37200" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/151 (35%), Positives = 84/151 (55%)

Query:     1 MRVFAGTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGL 60
             M+   G PGT  GL LR++Q + A  S++ M +T  F + TAFC L+ A+ LQ +WS  L
Sbjct:    31 MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query:    61 ALIDAYAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNE 120
              +IDAYA++ ++ L +  ++  F +GD V             GIT L   DLG C+V N 
Sbjct:    91 FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCNV-NH 148

Query:   121 CQKYQASVGLAICCCFTIATSSLIMLWLLAS 151
             C +++ +  +A    F ++ S ++  W LA+
Sbjct:   149 CTRFETATAMAFISWFAVSPSFILNFWSLAT 179

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:504956317 AT1G49405 "AT1G49405" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 46/146 (31%), Positives = 69/146 (47%)

Query:     6 GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
             G+ GT   L LR+ Q + A GS+  M     F+ FTAFCYL+  M L + W+  LA++D 
Sbjct:     6 GSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTLAMVDI 65

Query:    66 YAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNECQKYQ 125
             Y ++ ++    P ++    +GDWV              +  +   +   C     C +YQ
Sbjct:    66 YCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCP-PTICNRYQ 124

Query:   126 ASVGLAICCCFTIATSSLIMLWLLAS 151
              +  LA    F   +SSL  LWLL S
Sbjct:   125 FAATLAFLTWFLSLSSSLFNLWLLPS 150

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077962 AT3G50810 "AT3G50810" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 47/146 (32%), Positives = 66/146 (45%)

Query:     6 GTPGTATGLFLRIAQCIFAAGSIASMASTHSFFNFTAFCYLIAAMGLQVIWSFGLALIDA 65
             G+ GT+    LR  Q IF+A S+  M     F++FT FCYL   M +   WS  LAL D 
Sbjct:     6 GSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILLALTDT 65

Query:    66 YAIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNECQKYQ 125
             Y+++ K +     ++S+   GD+V               T L     G     + C +YQ
Sbjct:    66 YSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSLCIQYQ 125

Query:   126 ASVGLAICCCFTIATSSLIMLWLLAS 151
              S  LA  C F +  S+L   W L S
Sbjct:   126 VSAALAFLCWFLLLASALFNFWSLPS 151

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:1006230287 AT4G37235 "AT4G37235" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 45/145 (31%), Positives = 70/145 (48%)

Query:     9 GTATGLFLRIAQCIFAAGSIASMA--STHSFFNFTAFCYLIAAMGLQVIWSFGLALIDAY 66
             GT++   LR+ Q +F++ S+  M       F+ +T FCYL+  MGL   WS  LAL++AY
Sbjct:     9 GTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALMEAY 68

Query:    67 AIVQKKVLHSPVLISLFVVGDWVXXXXXXXXXXXXXGITTLYFYDLGHCSVDNECQKYQA 126
             +I+ KK+     +IS+ V GD+V              +  L   D G    + +C +Y+ 
Sbjct:    69 SILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLM-DAG----EKQCDRYKL 123

Query:   127 SVGLAICCCFTIATSSLIMLWLLAS 151
             S  +A    F    S+     LL S
Sbjct:   124 SATMAFLSSFLSFASTFFNFCLLPS 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.332   0.140   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      152       139   0.00091  102 3  11 21  0.43    30
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  145 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.55u 0.10s 11.65t   Elapsed:  00:00:01
  Total cpu time:  11.56u 0.10s 11.66t   Elapsed:  00:00:01
  Start:  Fri May 10 02:31:16 2013   End:  Fri May 10 02:31:17 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B6T990	CSPLI_MAIZE	No assigned EC number	0.5359	0.9934	0.9805	N/A	no
B8BD96	CSPLQ_ORYSI	No assigned EC number	0.5555	0.9934	0.9805	N/A	no
B6TAX2	CSPLN_MAIZE	No assigned EC number	0.5163	0.9934	0.9805	N/A	no
B8AC36	CSPLR_ORYSI	No assigned EC number	0.5256	0.9671	0.9607	N/A	no
Q6K478	CSPLQ_ORYSJ	No assigned EC number	0.5555	0.9934	0.9805	yes	no
Q8L7R5	CSPLG_ARATH	No assigned EC number	0.7260	0.9605	0.9605	yes	no
P0DI71	CSPL3_GINBI	No assigned EC number	0.5165	0.9868	0.8426	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT3G23200 unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 11 growth stages; CONTAINS InterPro DOMAIN/s- Uncharacterised protein family UPF0497, trans-membrane plant (InterPro-IPR006702); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G53850.1); Has 100 Blast hits to 100 proteins in 8 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (152 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	2e-16

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score = 71.2 bits (175), Expect = 2e-16
 Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 13/131 (9%)

Query: 6   GTPGTATGLFLRIAQCIFAAGSIASMASTH------------SFFNFTAFCYLIAAMGLQ 53
           G P     L LR+A  + A  +   M +              SF +  AF YL+ A  + 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 54  VIWSFGLALIDAYAIVQKKVLHSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDLG 113
             +S    ++  Y +  +K   +  L  L  + D V A L LAAASA+A I  L      
Sbjct: 61  AGYSLLQLVLSVYLLS-RKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 114 HCSVDNECQKY 124
           H +    C ++
Sbjct: 120 HANWMKICNQF 130

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	99.95
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	99.85
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.87

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=99.95  E-value=5.8e-28  Score=185.83  Aligned_cols=130  Identities=28%  Similarity=0.367  Sum_probs=121.2

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhccCC------------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 031826            7 TPGTATGLFLRIAQCIFAAGSIASMASTHS------------FFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVL   74 (152)
Q Consensus         7 ~pgt~~gL~LR~~q~~fa~~sl~~M~s~~~------------F~s~TaF~YLva~~~Lq~lwSl~la~~d~yall~k~~l   74 (152)
                      ++++..+++||+.|++++++|+.+|++++|            |+++++|+|+|+++++++.||+.|++.++|.+.+|+ .
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~-~   79 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK-L   79 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C
Confidence            357789999999999999999999999998            999999999999999999999999999999999999 7


Q ss_pred             CCcceeeeeeehhHHHHHHHHHhhhhhhhhhHhhhcCC------CCCCCc-ccchHHHHHHHHHHHHHHH
Q 031826           75 HSPVLISLFVVGDWVTATLSLAAASASAGITTLYFYDL------GHCSVD-NECQKYQASVGLAICCCFT  137 (152)
Q Consensus        75 ~~~~~~~l~~vGD~V~a~L~~aAAcasAgit~l~~~d~------~~C~~~-~~C~~~~~s~amAFlsw~~  137 (152)
                      +++...++.+++||+.+||+++|++|+++++.+.++|.      +.|+.+ .+|+|+++|++++|++|++
T Consensus        80 ~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   80 RSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            77788888999999999999999999999999988884      469987 5799999999999999974

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=99.85  E-value=4.9e-21  Score=149.85  Aligned_cols=131  Identities=18%  Similarity=0.290  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCC--------------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcce
Q 031826           14 LFLRIAQCIFAAGSIASMASTHS--------------FFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVL   79 (152)
Q Consensus        14 L~LR~~q~~fa~~sl~~M~s~~~--------------F~s~TaF~YLva~~~Lq~lwSl~la~~d~yall~k~~l~~~~~   79 (152)
                      +.||+..+.++++|..+|++++|              |+++++|.|+|+++++.+.||+.|+...+|.+.+++...   .
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~---~   77 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFF---K   77 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh---H
Confidence            47999999999999999999854              788999999999999999999999999999988777662   2


Q ss_pred             eeeeeehhHHHHHHHHHhhhhhhhhhHhhhcCCC------CCCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 031826           80 ISLFVVGDWVTATLSLAAASASAGITTLYFYDLG------HCSVD-NECQKYQASVGLAICCCFTIATSSLIMLW  147 (152)
Q Consensus        80 ~~l~~vGD~V~a~L~~aAAcasAgit~l~~~d~~------~C~~~-~~C~~~~~s~amAFlsw~~~a~S~l~~~w  147 (152)
                      .++.++|||+++||+++|++|+++++++.++|.+      .|.++ ++|+|...|++++|+++++.+.+++++-.
T Consensus        78 ~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~  152 (154)
T TIGR01569        78 LIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAI  152 (154)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5668999999999999999999999999988854      58877 68999999999999999999999998854

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.87  E-value=5.2e-08  Score=71.78  Aligned_cols=129  Identities=19%  Similarity=0.090  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhccC------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcceeeeeee
Q 031826           12 TGLFLRIAQCIFAAGSIASMASTH------SFFNFTAFCYLIAAMGLQVIWSFGLALIDAYAIVQKKVLHSPVLISLFVV   85 (152)
Q Consensus        12 ~gL~LR~~q~~fa~~sl~~M~s~~------~F~s~TaF~YLva~~~Lq~lwSl~la~~d~yall~k~~l~~~~~~~l~~v   85 (152)
                      -...+|+.|++++.+.+..++...      .....++.-|.+++.++..++++...+.+.+.  .|+.. +.......++
T Consensus         5 ~~~ilR~lq~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~~-~~~~~~~~~~   81 (144)
T PF01284_consen    5 PSGILRILQLVFALIIFGLVASSIATGSQIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS--LKYRP-RIPWPLVEFI   81 (144)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-ccccchhHHH
Confidence            356899999999999999998775      35667788899999999999999999999988  22222 2222233588


Q ss_pred             hhHHHHHHHHHhhhhhhhhhHhhhcC--CCCCC-Cc-ccchHHHHHHHHHHHHHHHHHHHHH
Q 031826           86 GDWVTATLSLAAASASAGITTLYFYD--LGHCS-VD-NECQKYQASVGLAICCCFTIATSSL  143 (152)
Q Consensus        86 GD~V~a~L~~aAAcasAgit~l~~~d--~~~C~-~~-~~C~~~~~s~amAFlsw~~~a~S~l  143 (152)
                      .|.+.+.+-+++++..+--..-.+.+  .+.+. +. ..|+..+++.+++|++|++-..|..
T Consensus        82 ~~~v~~il~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   82 FDAVFAILWLAAFIALAAYLSDHSCSNTGNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999888777543322211  11111 11 4599999999999999999988875

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00