Citrus Sinensis ID: 031855

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MIFINIERILFFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Secondary Structure (PSIPRED)
cEEEEEccEEEEEEEEEEEEEEcccccccccccccccccccccccccEEEEccEEEEccEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccEEEEEEcccccEEcc
Secondary Structure Prediction (SSPRO)
cccccccHHEEEEEEcccEEEEcccccccccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEEcccccccEEEEEccccEEEcc
Coil and Loop (DISEMBL)
MIFINIERILFFFKLHLQWVVQGAVdvdiganpsaegadedegvddqavKVVDIVDTfrlqeqpafdkKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQffvgesmhddgCLVFAYYkegatdptFLYIADALKEVKC
Flexible Loop (DISEMBL)
MIFINIERILFFFKLHLQWVVQGAVDVDIGANPSaegadedegvddQAVKVVDIVDTfrlqeqpafdkkqfVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Low Complexity Region (SEG)
MIFINIERILFFFKLHLQWVVQGAVDVDIGANPSaegadedegvddqavKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered region (IsUnstruct)
*IFINIERILFFFKLHLQWVVQGAVDVDIGA***************QAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAL*****
Disordered Region (DISOPRED)
*IFINIERILFFFKLHLQWVVQGAVDVDIGAN***************AVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLL*************KNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISEMBL)
MIFINIERILFFFKLHLQWVVQGAVDVDIGANP**********VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Disordered Region (DISPRO)
MIFINIERILFFFKLHLQWVVQGAVDVDI*A**************DQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIFINIERILFFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q9ZSW9	168	Translationally-controlle	N/A	no	0.927	0.839	0.893	6e-68
Q5J907	168	Translationally-controlle	N/A	no	0.888	0.803	0.866	7e-65
Q2PS27	168	Translationally-controlle	N/A	no	0.921	0.833	0.807	5e-62
Q9XHL7	168	Translationally-controlle	N/A	no	0.927	0.839	0.787	6e-62
Q6DUX3	168	Translationally-controlle	N/A	no	0.927	0.839	0.794	8e-61
Q944T2	168	Translationally-controlle	no	no	0.927	0.839	0.801	1e-60
P43349	168	Translationally-controlle	N/A	no	0.927	0.839	0.787	2e-60
O03992	170	Translationally-controlle	N/A	no	0.927	0.829	0.804	1e-59
Q9M5G3	168	Translationally-controlle	N/A	no	0.888	0.803	0.807	4e-59
P50906	167	Translationally-controlle	N/A	no	0.921	0.838	0.758	5e-57

>sp|Q9ZSW9|TCTP_HEVBR Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1

 Score =  255 bits (652), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 126/141 (89%), Positives = 132/141 (93%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY
Sbjct: 88  VTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           + GATDPTFLY A ALKEVKC
Sbjct: 148 RGGATDPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.
Hevea brasiliensis (taxid: 3981)

>sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1

 Score =  245 bits (626), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 128/135 (94%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
           +WV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR
Sbjct: 34  KWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           +IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATD
Sbjct: 94  YIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A  LKE+KC
Sbjct: 154 PTFLYFAYGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Elaeis guineensis var. tenera (taxid: 51953)

>sp|Q2PS27|TCTP_CUCMA Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1

 Score =  236 bits (601), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 113/140 (80%), Positives = 125/140 (89%)

Query: 13  FKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFV 72
           +++  +WVVQGAVDVDIGANPSAEG  EDEGVDDQAVKVVDIVDTFRLQEQP  DKKQF+
Sbjct: 29  WEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFI 88

Query: 73  TYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK 132
            Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+
Sbjct: 89  AYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYR 148

Query: 133 EGATDPTFLYIADALKEVKC 152
           EGATDPTFLY+A ALKEVKC
Sbjct: 149 EGATDPTFLYLAPALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Cucurbita maxima (taxid: 3661)

>sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1

 Score =  236 bits (601), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 128/141 (90%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDV+IGANPSAEGADEDEGVDDQA+KVVDIVDTFRLQEQP+FDKKQF
Sbjct: 28  LWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           V YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYY
Sbjct: 88  VAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           K+GATDPTFLY+A  LKEVKC
Sbjct: 148 KDGATDPTFLYLAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Nicotiana tabacum (taxid: 4097)

>sp|Q6DUX3|TCTP_SOLLC Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1

 Score =  232 bits (591), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 123/141 (87%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDV+IGANPSAEG  EDEGVDDQAV+VVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYY
Sbjct: 88  VTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           KEG+ DP FLYIA  LKE+KC
Sbjct: 148 KEGSADPPFLYIAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum lycopersicum (taxid: 4081)

>sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1

 Score =  231 bits (589), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 113/141 (80%), Positives = 125/141 (88%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVV+GAVDVDIGANPSAEG  EDEGVDD AVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYY
Sbjct: 88  VTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           K+GA DPTFLY A ALKEVKC
Sbjct: 148 KDGAADPTFLYFAYALKEVKC 168

Involved in calcium binding and microtubule stabilization.

Glycine max (taxid: 3847)

>sp|P43349|TCTP_SOLTU Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2

 Score =  231 bits (588), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 122/141 (86%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDV+IGANPSAEG  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYY
Sbjct: 88  VTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           K+G+ DPTFLY+A  LKE+KC
Sbjct: 148 KDGSADPTFLYLAPGLKEIKC 168

Involved in calcium binding and microtubule stabilization.

Solanum tuberosum (taxid: 4113)

>sp|O03992|TCTP_FRAAN Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1

 Score =  228 bits (580), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/143 (80%), Positives = 124/143 (86%), Gaps = 2/143 (1%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADED--EGVDDQAVKVVDIVDTFRLQEQPAFDKK 69
            +++  +WVVQGAVDVDIGANPSAEGAD D  EGVDDQ VKVVDIVDTFRLQEQP FDKK
Sbjct: 28  LWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKK 87

Query: 70  QFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFA 129
           QFVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA
Sbjct: 88  QFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFA 147

Query: 130 YYKEGATDPTFLYIADALKEVKC 152
            YKEGATDP F+Y A  LKEVKC
Sbjct: 148 SYKEGATDPIFIYFAHGLKEVKC 170

Involved in calcium binding and microtubule stabilization.

Fragaria ananassa (taxid: 3747)

>sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2

 Score =  226 bits (576), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/135 (80%), Positives = 117/135 (86%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
            WVVQGAVDVDIGANPSAEG  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF+ Y+KR
Sbjct: 34  HWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           +IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA D
Sbjct: 94  YIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAAD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A  LKEVKC
Sbjct: 154 PTFLYFAHGLKEVKC 168

Involved in calcium binding and microtubule stabilization.

Hordeum vulgare (taxid: 4513)

>sp|P50906|TCTP_PEA Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2

 Score =  219 bits (558), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 123/141 (87%), Gaps = 1/141 (0%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVV+GAVDV+IGANPSAEG  EDEGVDD AVKVVDIVD FRLQEQP FDKKQF
Sbjct: 28  LWEVEGKWVVKGAVDVNIGANPSAEGG-EDEGVDDTAVKVVDIVDVFRLQEQPPFDKKQF 86

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           + ++K++IKLLTPKL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYY
Sbjct: 87  LGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDGSLVFAYY 146

Query: 132 KEGATDPTFLYIADALKEVKC 152
           K+GA DPTFLY + ALKE+KC
Sbjct: 147 KDGAADPTFLYFSFALKEIKC 167

Involved in calcium binding and microtubule stabilization.

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
334854632	168	translationally controlled tumor protein	0.927	0.839	0.900	6e-67
84314025	168	translationally controlled tumor protein	0.888	0.803	0.933	2e-66
9979196	168	RecName: Full=Translationally-controlled	0.927	0.839	0.893	4e-66
386278572	168	translationally controlled tumor protein	0.888	0.803	0.925	1e-65
349891716	168	translationally controlled tumor protein	0.934	0.845	0.845	4e-64
192912974	168	translationally controlled tumor protein	0.888	0.803	0.874	3e-63
75222628	168	RecName: Full=Translationally-controlled	0.888	0.803	0.866	4e-63
115187479	168	translationally controlled tumor-like pr	0.927	0.839	0.829	2e-62
449435639	168	PREDICTED: translationally-controlled tu	0.934	0.845	0.802	4e-62
192910898	168	translationally controlled tumor protein	0.934	0.845	0.809	8e-62

>gi|334854632|gb|AEH05972.1| translationally controlled tumor protein [Hevea brasiliensis] gi|392514569|gb|AFM77714.1| TCTP.1 [Hevea brasiliensis]

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 133/141 (94%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY
Sbjct: 88  VTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           +EGATDPTFLY A ALKEVKC
Sbjct: 148 REGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84314025|gb|ABC55649.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 129/135 (95%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
           +WVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR
Sbjct: 34  KWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           FIKLLTP L EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+EGATD
Sbjct: 94  FIKLLTPMLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYREGATD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A ALKEVKC
Sbjct: 154 PTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9979196|sp|Q9ZSW9.1|TCTP_HEVBR RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|4193388|gb|AAD10032.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/141 (89%), Positives = 132/141 (93%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY
Sbjct: 88  VTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           + GATDPTFLY A ALKEVKC
Sbjct: 148 RGGATDPTFLYFAYALKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|386278572|gb|AFJ04518.1| translationally controlled tumor protein [Vernicia fordii]

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/135 (92%), Positives = 129/135 (95%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
           +WVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR
Sbjct: 34  KWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           FIKLLT KL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDD CLVFA+YK+GATD
Sbjct: 94  FIKLLTAKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDACLVFAFYKDGATD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A ALKEVKC
Sbjct: 154 PTFLYFAYALKEVKC 168

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349891716|gb|AEQ20639.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 120/142 (84%), Positives = 131/142 (92%)

Query: 11  FFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ 70
             +++  +WVVQGA+DVDIGANPSAEG +EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ
Sbjct: 27  MLWEVEGKWVVQGAIDVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ 86

Query: 71  FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 130
           FVTYMKR+IKLLTPKL  E+QE+FKK+IEGATKFLLSKL DLQFFVGESMHDDG LVFAY
Sbjct: 87  FVTYMKRYIKLLTPKLEPEKQELFKKHIEGATKFLLSKLIDLQFFVGESMHDDGSLVFAY 146

Query: 131 YKEGATDPTFLYIADALKEVKC 152
           YKEGATDPTFLY+A  LKEVKC
Sbjct: 147 YKEGATDPTFLYLAYGLKEVKC 168

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192912974|gb|ACF06595.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 118/135 (87%), Positives = 128/135 (94%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
           +WV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR
Sbjct: 34  KWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           +IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATD
Sbjct: 94  YIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A  LKEVKC
Sbjct: 154 PTFLYFAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75222628|sp|Q5J907.1|TCTP_ELAGV RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|36963062|gb|AAQ87663.1| translationally controlled tumor protein [Elaeis guineensis] gi|306450591|gb|ADM88549.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 128/135 (94%)

Query: 18  QWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
           +WV+QGAV+VDIGANPSAEG +EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR
Sbjct: 34  KWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKR 93

Query: 78  FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
           +IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATD
Sbjct: 94  YIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATD 153

Query: 138 PTFLYIADALKEVKC 152
           PTFLY A  LKE+KC
Sbjct: 154 PTFLYFAYGLKEIKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115187479|gb|ABI84255.1| translationally controlled tumor-like protein [Arachis hypogaea]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/141 (82%), Positives = 128/141 (90%)

Query: 12  FFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF 71
            +++  +WV+QGA++VDIGANPSAEG +EDE VDDQAVKVVDIVDTFRLQEQPAFDKKQF
Sbjct: 28  LWEVEGKWVIQGAINVDIGANPSAEGGEEDESVDDQAVKVVDIVDTFRLQEQPAFDKKQF 87

Query: 72  VTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           VTYMKR+IKLLT KL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY
Sbjct: 88  VTYMKRYIKLLTAKLEPEQQEHFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYY 147

Query: 132 KEGATDPTFLYIADALKEVKC 152
           KEGATDPTFLY A  LKE+KC
Sbjct: 148 KEGATDPTFLYFAHGLKEIKC 168

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435639|ref|XP_004135602.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus] gi|449525492|ref|XP_004169751.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus]

 Score =  242 bits (618), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 114/142 (80%), Positives = 130/142 (91%)

Query: 11  FFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ 70
             +++  +WVVQGA+DVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQP+FDKKQ
Sbjct: 27  MLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPSFDKKQ 86

Query: 71  FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 130
           F+TYMKR+IKLLTPKL EE+QE+F+K+I  ATKFL+SK+ DLQFFVGE MHDDG +VFAY
Sbjct: 87  FITYMKRYIKLLTPKLDEEKQELFRKHIPEATKFLISKIDDLQFFVGEGMHDDGTMVFAY 146

Query: 131 YKEGATDPTFLYIADALKEVKC 152
           YKEGATDPTF+YIA  LKEVKC
Sbjct: 147 YKEGATDPTFIYIAYGLKEVKC 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910898|gb|ACF06557.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  241 bits (614), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 115/142 (80%), Positives = 129/142 (90%)

Query: 11  FFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ 70
             +++  +WVVQGAV+VDIGANPSAEG +EDEGVDDQ  KVVDIVDTFRLQEQPAFDKKQ
Sbjct: 27  MLWEVEGKWVVQGAVNVDIGANPSAEGGEEDEGVDDQTQKVVDIVDTFRLQEQPAFDKKQ 86

Query: 71  FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAY 130
           FVT+MKR+IK LTPKL  E+QE+FKK+IEGATK+LLSKLSDLQFFVGESMHDDG +VFAY
Sbjct: 87  FVTFMKRYIKQLTPKLDAEKQELFKKHIEGATKYLLSKLSDLQFFVGESMHDDGSMVFAY 146

Query: 131 YKEGATDPTFLYIADALKEVKC 152
           YKEGATDPTFLY+A  LKEVKC
Sbjct: 147 YKEGATDPTFLYLAYGLKEVKC 168

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2089378	168	TCTP "translationally controll	0.888	0.803	0.688	4.8e-46
TAIR|locus:2078052	168	AT3G05540 [Arabidopsis thalian	0.881	0.797	0.661	1.3e-43
DICTYBASE|DDB_G0282853	174	DDB_G0282853 "TCTP family prot	0.828	0.724	0.358	1.4e-16
POMBASE|SPAC1F12.02c	168	SPAC1F12.02c "translationally	0.934	0.845	0.328	7.7e-16
SGD|S000001539	167	TMA19 "Protein that associates	0.743	0.676	0.378	1.8e-14
UNIPROTKB|Q6XIN1	172	Tctp "Translationally-controll	0.907	0.802	0.319	4.9e-14
FB|FBgn0037874	172	Tctp "Translationally controll	0.907	0.802	0.319	1e-13
UNIPROTKB|Q293Y0	172	Tctp "Translationally-controll	0.664	0.587	0.383	1.3e-13
CGD|CAL0003369	167	TMA19 [Candida albicans (taxid	0.848	0.772	0.348	2.7e-13
UNIPROTKB|Q5A860	167	TMA19 "Translationally-control	0.848	0.772	0.348	2.7e-13

TAIR|locus:2089378 TCTP "translationally controlled tumor protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 93/135 (68%), Positives = 104/135 (77%)

Query:    18 QWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
             +WV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K+
Sbjct:    34 KWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKK 93

Query:    78 FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
             +IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+
Sbjct:    94 YIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTN 153

Query:   138 PTFLYIADALKEVKC 152
             PTFLY A  LKEVKC
Sbjct:   154 PTFLYFAHGLKEVKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0009860 "pollen tube growth" evidence=IMP

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048527 "lateral root development" evidence=IMP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0090406 "pollen tube" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007067 "mitosis" evidence=RCA

GO:0009734 "auxin mediated signaling pathway" evidence=RCA

GO:0008017 "microtubule binding" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0031117 "positive regulation of microtubule depolymerization" evidence=IMP

GO:0090333 "regulation of stomatal closure" evidence=IMP

TAIR|locus:2078052 AT3G05540 [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query:    18 QWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKR 77
             +WVV+GA+D DIGANP                KVVDI+DTFRLQEQP+FDKKQFV +MKR
Sbjct:    34 KWVVKGAMDFDIGANPGEEGGEDEGVDDQAV-KVVDIIDTFRLQEQPSFDKKQFVMFMKR 92

Query:    78 FIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMH-DDGCLVFAYYKEGAT 136
             +IK L+PKL  E QE+FKK+IE ATKFL+SKL D QFFVGESM  ++G LVFAYY+EGAT
Sbjct:    93 YIKQLSPKLDSENQELFKKHIESATKFLMSKLKDFQFFVGESMEGEEGSLVFAYYREGAT 152

Query:   137 DPTFLYIADALKEVKC 152
             DPTFLY+A  LKE+KC
Sbjct:   153 DPTFLYLAYGLKEIKC 168

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0282853 DDB_G0282853 "TCTP family protein 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 47/131 (35%), Positives = 69/131 (52%)

Query:    25 VDVDIGANPSXXXXXXXXXXXXXXXK-VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT 83
             V V+ GAN +               K V+++VD  RL E  +FDKK +  Y+K ++K + 
Sbjct:    44 VKVNTGANAASEETEEDEGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVL 102

Query:    84 PKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 140
              KL++    R + FKK+     K +L K  + +F+ GE+M  DG +   YYK G  DP F
Sbjct:   103 AKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIF 162

Query:   141 LYIADALKEVK 151
             LY  D L+ VK
Sbjct:   163 LYFKDGLESVK 173

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC1F12.02c SPAC1F12.02c "translationally controlled tumor protein homolog (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 49/149 (32%), Positives = 76/149 (51%)

Query:     6 IERILFFFKLHLQWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPA 65
             ++ I++     +  V QG  DVDIGANPS                V ++V +FRL    +
Sbjct:    23 VDDIVYEADCQMVTVKQGG-DVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-S 78

Query:    66 FDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHD 122
             FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  
Sbjct:    79 FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDP 138

Query:   123 DGCLVFAYYKEGATDPTFLYIADALKEVK 151
             D  +V   Y+E    P  ++  D L   K
Sbjct:   139 DAMVVLMNYREDGITPYMIFFKDGLVSEK 167

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

SGD|S000001539 TMA19 "Protein that associates with ribosomes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 45/119 (37%), Positives = 64/119 (53%)

Query:    23 GAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLL 82
             G  ++DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +
Sbjct:    38 GGDNIDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAV 94

Query:    83 TPKLSEER-QEI--FKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 138
               KL E   +E+  F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:    95 KAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006412 "translation" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005840 "ribosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0002181 "cytoplasmic translation" evidence=IMP

UNIPROTKB|Q6XIN1 Tctp "Translationally-controlled tumor protein homolog" [Drosophila yakuba (taxid:7245)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 47/147 (31%), Positives = 75/147 (51%)

Query:    13 FKLHLQWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQ 70
             ++++ + + +   D+ + GAN S                 VD+V   RLQE  AF DKK 
Sbjct:    28 YEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKS 85

Query:    71 FVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLV 127
             +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG + 
Sbjct:    86 YTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVA 145

Query:   128 FAYYKE--GATDPTFLYIADALKEVKC 152
                Y+E  G + P  ++    L E KC
Sbjct:   146 LVEYREINGDSVPVLMFFKHGLDEEKC 172

GO:0005509 "calcium ion binding" evidence=ISS

GO:0045298 "tubulin complex" evidence=ISS

FB|FBgn0037874 Tctp "Translationally controlled tumor protein ortholog (H. sapiens)" [Drosophila melanogaster (taxid:7227)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 47/147 (31%), Positives = 75/147 (51%)

Query:    13 FKLHLQWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQ 70
             ++++ + + +   D+ + GAN S                 VD+V   RL E  AF DKK 
Sbjct:    28 YEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLTECFAFGDKKS 85

Query:    71 FVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLV 127
             +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG + 
Sbjct:    86 YTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVA 145

Query:   128 FAYYKE--GATDPTFLYIADALKEVKC 152
                Y+E  G + P  ++    L+E KC
Sbjct:   146 LVEYREINGDSVPVLMFFKHGLEEEKC 172

GO:0005737 "cytoplasm" evidence=NAS

GO:0045793 "positive regulation of cell size" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0005088 "Ras guanyl-nucleotide exchange factor activity" evidence=IDA

UNIPROTKB|Q293Y0 Tctp "Translationally-controlled tumor protein homolog" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 41/107 (38%), Positives = 62/107 (57%)

Query:    52 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLS 107
             VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L 
Sbjct:    66 VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILG 125

Query:   108 KLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 152
             +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   126 RFKELQFFTGESMDCDGMVALVEYREIDGQSIPVLMFFKHGLEEEKC 172

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0045298 "tubulin complex" evidence=ISS

CGD|CAL0003369 TMA19 [Candida albicans (taxid:5476)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 47/135 (34%), Positives = 64/135 (47%)

Query:    20 VVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFI 79
             V  G  D+DIGANPS                V ++V +FRLQ    FDKK F TY+K ++
Sbjct:    35 VTVGNGDIDIGANPSAEDGEEALEDGAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYM 91

Query:    80 KLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGAT 136
             K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T
Sbjct:    92 KRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGT 151

Query:   137 DPTFLYIADALKEVK 151
              P        +KE K
Sbjct:   152 TPYVAIWKHGVKENK 166

GO:0003674 "molecular_function" evidence=ND

GO:0005840 "ribosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0002181 "cytoplasmic translation" evidence=IEA

UNIPROTKB|Q5A860 TMA19 "Translationally-controlled tumor protein homolog" [Candida albicans SC5314 (taxid:237561)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 47/135 (34%), Positives = 64/135 (47%)

Query:    20 VVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFI 79
             V  G  D+DIGANPS                V ++V +FRLQ    FDKK F TY+K ++
Sbjct:    35 VTVGNGDIDIGANPSAEDGEEALEDGAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYM 91

Query:    80 KLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGAT 136
             K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T
Sbjct:    92 KRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGT 151

Query:   137 DPTFLYIADALKEVK 151
              P        +KE K
Sbjct:   152 TPYVAIWKHGVKENK 166

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35681	TCTP_ORYSJ	No assigned EC number	0.8222	0.8881	0.8035	yes	no
Q6C4G1	TCTP_YARLI	No assigned EC number	0.3624	0.9276	0.8443	yes	no
O03992	TCTP_FRAAN	No assigned EC number	0.8041	0.9276	0.8294	N/A	no
Q10344	TCTP_SCHPO	No assigned EC number	0.3586	0.9078	0.8214	yes	no
Q8LRM8	TCTP_WHEAT	No assigned EC number	0.7925	0.8881	0.8035	N/A	no
Q944T2	TCTP_SOYBN	No assigned EC number	0.8014	0.9276	0.8392	no	no
Q9ZRX0	TCTP_PSEMZ	No assigned EC number	0.7659	0.9210	0.8383	N/A	no
Q9VGS2	TCTP_DROME	No assigned EC number	0.3673	0.9078	0.8023	yes	no
Q9XHL7	TCTP_TOBAC	No assigned EC number	0.7872	0.9276	0.8392	N/A	no
Q9M5I8	TCTP_CUCME	No assigned EC number	0.7253	0.9342	0.8452	N/A	no
P28014	TCTP_MEDSA	No assigned EC number	0.7851	0.8815	0.8023	N/A	no
Q8H6A5	TCTP_MAIZE	No assigned EC number	0.6879	0.9210	0.8383	N/A	no
Q9DGK4	TCTP_DANRE	No assigned EC number	0.3378	0.9144	0.8128	yes	no
P50906	TCTP_PEA	No assigned EC number	0.7588	0.9210	0.8383	N/A	no
Q2PS27	TCTP_CUCMA	No assigned EC number	0.8071	0.9210	0.8333	N/A	no
Q5J907	TCTP_ELAGV	No assigned EC number	0.8666	0.8881	0.8035	N/A	no
P31265	TCTP_ARATH	No assigned EC number	0.7234	0.9276	0.8392	yes	no
Q9M5G3	TCTP_HORVU	No assigned EC number	0.8074	0.8881	0.8035	N/A	no
Q9ZSW9	TCTP_HEVBR	No assigned EC number	0.8936	0.9276	0.8392	N/A	no
P43349	TCTP_SOLTU	No assigned EC number	0.7872	0.9276	0.8392	N/A	no
Q944W6	TCTP_BRAOL	No assigned EC number	0.6950	0.9276	0.8392	N/A	no
Q6DUX3	TCTP_SOLLC	No assigned EC number	0.7943	0.9276	0.8392	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_2100027 SubName- Full=Putative uncharacterized protein; (168 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
pfam00838	165	pfam00838, TCTP, Translationally controlled tumour	7e-55
PTZ00151	172	PTZ00151, PTZ00151, translationally controlled tum	9e-28

>gnl|CDD|189736 pfam00838, TCTP, Translationally controlled tumour protein

 Score =  169 bits (430), Expect = 7e-55
 Identities = 67/136 (49%), Positives = 86/136 (63%), Gaps = 7/136 (5%)

Query: 18  QWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMK 76
           + V + G  DV IGANPSAEG +E  GVD+   +VVDIV  FRLQE  +FDKK F TY+K
Sbjct: 33  KMVTRTGGDDVLIGANPSAEGGEE--GVDETVERVVDIVLNFRLQET-SFDKKSFKTYIK 89

Query: 77  RFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE 133
            ++K +  KL EE  E   +FKKNI+G  K LL+K  D QFF+GESM+ DG +    Y+E
Sbjct: 90  GYMKAVKAKLQEENPERVSLFKKNIQGWVKSLLAKFKDYQFFIGESMNPDGMVALMNYRE 149

Query: 134 GATDPTFLYIADALKE 149
               P  ++  D L E
Sbjct: 150 DGETPYMIFFKDGLIE 165

Length = 165

>gnl|CDD|173440 PTZ00151, PTZ00151, translationally controlled tumor-like protein; Provisional

 Score =  100 bits (252), Expect = 9e-28
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 7/135 (5%)

Query: 20  VVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFI 79
           V++G  D  I  N S EG  + EGVD     V+DIVD F+LQ  P F KK++ TY+K+++
Sbjct: 41  VIKGNEDYGIADN-SEEG--DVEGVDADVETVIDIVDAFKLQSTP-FTKKEYSTYIKKYM 96

Query: 80  KLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGAT 136
           + +   L E   +R E FK N +   K +L    D +F++GES+  +  L++ YYK    
Sbjct: 97  QRIKAYLEEKNPDRVEKFKTNAQPFVKHILENFDDFEFYLGESLDCEAGLIYGYYKGEEL 156

Query: 137 DPTFLYIADALKEVK 151
            P F+YI D LKE +
Sbjct: 157 APRFVYIKDGLKEER 171

Length = 172

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
PTZ00151	172	translationally controlled tumor-like protein; Pro	100.0
PF00838	165	TCTP: Translationally controlled tumour protein; I	100.0
KOG1727	169	consensus Microtubule-binding protein (translation	100.0

>PTZ00151 translationally controlled tumor-like protein; Provisional

Probab=100.00  E-value=2e-67  Score=416.71  Aligned_cols=147  Identities=34%  Similarity=0.631  Sum_probs=141.1

Q ss_pred             ceeeeeee----------eeEEEEEEEEEEeccccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHH
Q 031855            2 IFINIERI----------LFFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF   71 (152)
Q Consensus         2 ~f~~~~~i----------~~~yeV~~k~vt~~~~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y   71 (152)
                      ||||+|++          +++|||+||+|+++.++  ||+|||||+++ +|++|+++++|||||+|||||| |+||||+|
T Consensus        13 m~SDsyk~~~~~~~~~~~~~~yEV~~k~v~~~~~d--ig~n~saee~~-~e~~d~~~~~vvDIV~~frLqe-t~f~Kk~Y   88 (172)
T PTZ00151         13 VCSDSYKQLDPFGNAEFSEIAFEVKSKKVIKGNED--YGIADNSEEGD-VEGVDADVETVIDIVDAFKLQS-TPFTKKEY   88 (172)
T ss_pred             eecccccccccccccccCCEEEEEeeEEEEECCcc--ccCCCCccccc-ccccccccEEEEEeeecCccee-cCCCHHHH
Confidence            79999987          69999999999998765  69999999753 6889999999999999999999 99999999


Q ss_pred             HHHHHHHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccc
Q 031855           72 VTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALK  148 (152)
Q Consensus        72 ~~yiK~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~  148 (152)
                      ++|||+|||+|++||   +|+||+.|+++||++||+||+||+||||||||||||||||||++|||||+||||+||||||+
T Consensus        89 ~~yiK~YmK~vk~~L~e~~pe~v~~Fk~~a~~~vK~il~~Fkd~qFf~GeSmd~dgmv~l~~Yredg~tP~~~f~KdGL~  168 (172)
T PTZ00151         89 STYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHILENFDDFEFYLGESLDCEAGLIYGYYKGEELAPRFVYIKDGLK  168 (172)
T ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHhcCCceEeecCCCCCCccEEEEeecCCCcceEEEEEcccce
Confidence            999999999999999   69999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecC
Q 031855          149 EVKC  152 (152)
Q Consensus       149 eeK~  152 (152)
                      ||||
T Consensus       169 eeK~  172 (172)
T PTZ00151        169 EERY  172 (172)
T ss_pred             eecC
Confidence            9998

>PF00838 TCTP: Translationally controlled tumour protein; InterPro: IPR018105 Mammalian translationally controlled tumour protein (TCTP) (or P23) is a protein which has been found to be preferentially synthesised in cells during the early growth phase of some types of tumour [, ], but which is also expressed in normal cells

Probab=100.00  E-value=1.8e-64  Score=398.00  Aligned_cols=145  Identities=41%  Similarity=0.686  Sum_probs=133.4

Q ss_pred             ceeeeeeee----eEEEEEEEEEEec-cccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHHHHH
Q 031855            2 IFINIERIL----FFFKLHLQWVVQG-AVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMK   76 (152)
Q Consensus         2 ~f~~~~~i~----~~yeV~~k~vt~~-~~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~yiK   76 (152)
                      ||||+|++.    ++|||+||+|+++ .++++||||||||+++  |++++++++|||||+|||||| |+||||+|++|||
T Consensus        13 m~SD~y~~~~~~~~~yeV~gk~vt~~~~d~~liG~N~SaE~~~--e~~~~~~~~viDiV~~~~L~e-t~f~Kk~y~~yiK   89 (165)
T PF00838_consen   13 MFSDSYKIELVDDVFYEVEGKMVTRTGIDDSLIGANPSAEEGE--EGTDDSVETVIDIVDNHRLQE-TSFDKKSYKAYIK   89 (165)
T ss_dssp             EEETTSCEEEGCTTEEEEE--EEEEETTB-TTTSSS--SSSSS--SSSCCCECEEEHHHHHTTEEE-ECCHHHHHHHHHH
T ss_pred             ecccCccccccCCEEEEEEEEEEeeccccccccccCcccccCc--cCCCCccEEccceeeccccee-ecccHHHHHHHHH
Confidence            799999886    8999999999995 5567899999999865  889999999999999999999 9999999999999


Q ss_pred             HHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccce
Q 031855           77 RFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE  149 (152)
Q Consensus        77 ~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~e  149 (152)
                      +|||+|++||   .|+||++|+++|++++|+||+||||||||+||||||||||||++|||||+||+|+||||||+|
T Consensus        90 ~Y~K~i~~kL~e~~~erv~~F~~~a~~~vK~il~nfkd~qFf~Gesm~~dgmv~l~~yredg~tP~~~f~KdGL~E  165 (165)
T PF00838_consen   90 DYMKKIKEKLEENGPERVKAFKKGAQEFVKKILANFKDYQFFTGESMDPDGMVALLNYREDGVTPYFIFFKDGLKE  165 (165)
T ss_dssp             HHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHTGGGCEEEEETTCCTTS-EEEEEEETTSSSEEEEEEGGGEEE
T ss_pred             HHHHHHHHHHhhhccchhhHHHHHhHHHHHHHHhhccccccccccccCCCCcEEEEEecCCCccEEEEEEcccccC
Confidence            9999999999   799999999999999999999999999999999999999999999999999999999999987

The physiological function of TCTP is still not known. It was first identified as a histamine-releasing factor, acting in IgE +-dependent allergic reactions. In addition, TCTP has been shown to bind to tubulin in the cytoskeleton, has a high affinity for calcium, is the binding target for the antimalarial compound artemisinin, and is induced in vitamin D-dependent apoptosis. TCTP production is thought to be controlled at the translational as well as the transcriptional level []. TCTP is a hydrophilic protein of 18 to 20 kD. TCTPs do not share significant sequence similarity with any other class of proteins. Recently, the structure of TCTP was determined and exhibited significant structural similarity to the human protein Mss4, which is a guanine nucleotide-free chaperone of the Rab protein []. Close homologues have been found in plants [], earthworm [], Caenorhabditis elegans (F52H2.11), Hydra, Saccharomyces cerevisiae (YKL056c) [] and Schizosaccharomyces pombe (SpAC1F12.02c).; PDB: 2KWB_A 2LOY_A 1TXJ_A 1H6Q_A 1H7Y_A 3P3K_A 1YZ1_C 3EBM_D 2HR9_A.

>KOG1727 consensus Microtubule-binding protein (translationally controlled tumor protein) [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=100.00  E-value=1.6e-57  Score=356.77  Aligned_cols=150  Identities=39%  Similarity=0.637  Sum_probs=138.2

Q ss_pred             ceeeeeeee----eEEEEEEEEEEecccc-ccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHHHHH
Q 031855            2 IFINIERIL----FFFKLHLQWVVQGAVD-VDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMK   76 (152)
Q Consensus         2 ~f~~~~~i~----~~yeV~~k~vt~~~~~-~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~yiK   76 (152)
                      ++||+|.+.    ++|||+||+|||+++| .+||+|||||++.++|++++++++|+|||++|||||+ ++.|+.|++|||
T Consensus        13 l~sd~~~~k~i~~l~~EvegK~vsr~~~D~~lig~NpSaE~~~edegte~~~~~~vdiV~~~rLqEq-~~~ke~~k~yik   91 (169)
T KOG1727|consen   13 LLSDSYPMKEVDDLCYEVEGKMVTRTNGDDSLIGANPSAEEGAEDEGTEETVETVVDIVLNFRLQEQ-SPFKERFKAYIK   91 (169)
T ss_pred             hcccchhHHHHHhhhheeeceeccccCccchhcccCccccccccCCcchhheeeeeeeeeeeccccc-chHHHHHHHHHH
Confidence            577887543    9999999999998665 4699999999965589999999999999999999995 444999999999


Q ss_pred             HHHHHhccCCChHHHHHHHHhhHHHHHHHHh-cCCCcceeecCCcCCCceEEEEeccCCC-cceEEEEEccccceecC
Q 031855           77 RFIKLLTPKLSEERQEIFKKNIEGATKFLLS-KLSDLQFFVGESMHDDGCLVFAYYKEGA-TDPTFLYIADALKEVKC  152 (152)
Q Consensus        77 ~Y~K~vk~kL~~e~v~~Fk~~a~~~vK~il~-nfkd~qFf~Gesmd~dgmv~l~~y~edg-~tP~~~f~KdGL~eeK~  152 (152)
                      +|||+|++||.+++++.|++++++++|.++. ||||||||+||||||||||||++||||| +||+|+||||||++|||
T Consensus        92 ~ymK~v~~klee~~~~~f~k~~~~a~q~~h~anFKnyqFFIGEnMnpdgmVal~~YRedg~~~P~~~ffk~gl~~ekc  169 (169)
T KOG1727|consen   92 GYMKAVKAKLEEEDVDVFKKNIQGAEKIKHIANFKNYQFFIGENMNPDGMVALLDYREDGGVTPYMIFFKDGLEEEKC  169 (169)
T ss_pred             HHHHHhhhhhhhhhhhhhhhccchHHHHHHhhccccceeeecccCCCCceEEEeeeecCCCcCceEEEeccCcccccC
Confidence            9999999999889999999999999998887 9999999999999999999999999965 99999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
1h6q_A	168	Translationally Controlled Tumor-Associated Protein		9e-15
3p3k_A	183	The Crystal Structure Of Translationally Controlled		4e-13
1txj_A	171	Crystal Structure Of Translationally Controlled Tum		2e-12
1yz1_A	174	Crystal Structure Of Human Translationally Controll		2e-11
3ebm_A	180	Crystal Structure Of Human Translationally Controll		2e-11
2hr9_A	180	Solution Structure Of Human Translationally Control		2e-11
2kwb_A	189	Minimal Constraint Solution Nmr Structure Of Transl		3e-06

>pdb|1H6Q|A Chain A, Translationally Controlled Tumor-Associated Protein P23fyp From Schizosaccharomyces Pombe Length = 168

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 6   IERILFFFKLHLQWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPA 65
           ++ I++     +  V QG  DVDIGANPS                V ++V +FRL    +
Sbjct: 23  VDDIVYEADCQMVTVKQGG-DVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-S 78
Query: 66  FDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHD 122
           FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  
Sbjct: 79  FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDP 138
Query: 123 DGCLVFAYYKEGATDPTFLYIADAL 147
           D  +V   Y+E    P  ++  D L
Sbjct: 139 DAMVVLMNYREDGITPYMIFFKDGL 163

>pdb|3P3K|A Chain A, The Crystal Structure Of Translationally Controlled Tumor Protein (Tctp) Of Plasmodium Falciparum Length = 183

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 51  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLS 107
           V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK   +   K +L+
Sbjct: 72  VIDIVDSFQLT-STAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILT 130
Query: 108 KLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 151
              D +F++GES+  +  ++++YYK     P F+YI+D L E K
Sbjct: 131 NFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 174

>pdb|1TXJ|A Chain A, Crystal Structure Of Translationally Controlled Tumour- Associated Protein (Tctp) From Plasmodium Knowlesi Length = 171

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 50  KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLL 106
           +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK   +   K +L
Sbjct: 67  QVIDIVDSFQLT-STSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHIL 125
Query: 107 SKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 151
           +   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct: 126 TNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>pdb|1YZ1|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein Length = 174

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 52  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 108
           VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 72  VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 130
Query: 109 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 152
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 131 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 174

>pdb|3EBM|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein (Htctp) Mutant E12v Length = 180

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 52  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 108
           VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 70  VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 128
Query: 109 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 152
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 129 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|2HR9|A Chain A, Solution Structure Of Human Translationally Controlled Tumor Protein Length = 180

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 52  VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSK 108
           VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+ 
Sbjct: 70  VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 128
Query: 109 LSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 152
             + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct: 129 FKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172

>pdb|2KWB|A Chain A, Minimal Constraint Solution Nmr Structure Of Translationally Controlled Tumor Protein (Tctp) From C.Elegans, Northeast S Genomics Consortium Target Wr73 Length = 189

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 30  GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE 88
           G+NPS               + +DIV   +L E   + D   F  Y+K+F+K +   + +
Sbjct: 46  GSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEK 105
Query: 89  ERQE-----IFKKNIEGATKFLLSK--LSDLQFFVGESMHD---DGCLVFAYYKE--GAT 136
             ++      FKK I+G    LL+K    +L FF+GE   +   +G +    Y++  G  
Sbjct: 106 NNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTE 165
Query: 137 DPTFLYIADALKEVKC 152
            PT + + +A+ E KC
Sbjct: 166 VPTLMLVKEAIIEEKC 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1yz1_A	174	Translationally controlled tumor protein; unknown	2e-44
1txj_A	171	Translationally controlled tumour-associated prote	1e-40
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	7e-40
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	1e-38
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A Length = 174

 Score =  142 bits (360), Expect = 2e-44
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 8/141 (5%)

Query: 18  QWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTY 74
           + V +   ++D   IG N SAEG  E EG +   +  VDIV    LQE   F K+ +  Y
Sbjct: 36  KMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVITGVDIVMNHHLQETS-FTKEAYKKY 93

Query: 75  MKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           +K ++K +  KL E+R E    F        K +L+   + QFF+GE+M+ DG +    Y
Sbjct: 94  IKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY 153

Query: 132 KEGATDPTFLYIADALKEVKC 152
           +E    P  ++  D L+  KC
Sbjct: 154 REDGVTPYMIFFKDGLEMEKC 174

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A Length = 171

 Score =  133 bits (336), Expect = 1e-40
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 2   IFINIERILFFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQ 61
            F   +     F++     ++G  D  I  N      +  +G+     +V+DIVD+F+L 
Sbjct: 23  PFGIADFREIAFEVKSNKRIKGNDDYGIADNSE----EAVDGMGADVEQVIDIVDSFQLT 78

Query: 62  EQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGE 118
                 KK++  Y+K +++ +   L E++ +   +FK   +   K +L+   D +F++GE
Sbjct: 79  STS-LSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGE 137

Query: 119 SMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 151
           S+  D  L ++YYK     P F+YI+D L E K
Sbjct: 138 SLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A Length = 168

 Score =  131 bits (330), Expect = 7e-40
 Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 20  VVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFI 79
            V+   DVDIGANPSAE    +E  ++    V ++V +FRL     FDKK +++Y+K ++
Sbjct: 36  TVKQGGDVDIGANPSAED--AEENAEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYM 92

Query: 80  KLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGAT 136
           K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E   
Sbjct: 93  KAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGI 152

Query: 137 DPTFLYIADALKEVK 151
            P  ++  D L   K
Sbjct: 153 TPYMIFFKDGLVSEK 167

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A Length = 189

 Score =  128 bits (324), Expect = 1e-38
 Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 14/149 (9%)

Query: 18  QWVVQGAVDVDI-GANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAF-DKKQFVTYM 75
           + VV+   ++ + G+NPSAE   ED+G D+   + +DIV   +L E   + D   F  Y+
Sbjct: 33  KHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYI 92

Query: 76  KRFIKLLTPKLSEERQEI-----FKKNIEGATKFLLSKLS--DLQFFVGESM---HDDGC 125
           K+F+K +   + +  ++      FKK I+G    LL+K    +L FF+GE      ++G 
Sbjct: 93  KKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQ 152

Query: 126 LVFAYYKE--GATDPTFLYIADALKEVKC 152
           +    Y++  G   PT + + +A+ E KC
Sbjct: 153 VAIIEYRDVDGTEVPTLMLVKEAIIEEKC 181

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 17/114 (14%)

Query: 39  DEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFK-KN 97
           D + G      K  DI+  F       FD K      K  +        EE   I   K+
Sbjct: 8   DFETGEHQYQYK--DILSVFEDAFVDNFDCKDVQDMPKSILS------KEEIDHIIMSKD 59

Query: 98  IEGATKFLLSKLSD-----LQFFVGESMHDD-GCLVFAYYKE--GATDPTFLYI 143
               T  L   L       +Q FV E +  +   L+     E    +  T +YI
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	100.0
1yz1_A	174	Translationally controlled tumor protein; unknown	100.0
1txj_A	171	Translationally controlled tumour-associated prote	100.0
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	100.0

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A

Probab=100.00  E-value=1e-69  Score=427.61  Aligned_cols=148  Identities=34%  Similarity=0.603  Sum_probs=143.9

Q ss_pred             ceeeeeeee----eEEEEEEEEEEe-ccccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHHHHH
Q 031855            2 IFINIERIL----FFFKLHLQWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMK   76 (152)
Q Consensus         2 ~f~~~~~i~----~~yeV~~k~vt~-~~~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~yiK   76 (152)
                      ||||+|++.    ++|||+||+|++ ++++++||||||||++  +|++|+++++|||||+|||||| |+||||+|++|||
T Consensus        13 m~SDsy~~k~vd~~~yEV~gk~v~~~~~~didiGaN~SaE~~--~eg~d~~~~~vvdiV~~~rLqe-t~fdKk~y~~yiK   89 (168)
T 1h6q_A           13 LVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDIGANPSAEDA--EENAEEGTETVNNLVYSFRLSP-TSFDKKSYMSYIK   89 (168)
T ss_dssp             CEETTTCEEECSSSEEEEECCEEEEECCCCSTTSCCCCCCSC--SCSSCCCEEEEEHHHHHTTCEE-CCCCHHHHHHHHH
T ss_pred             EeecCcccEeeCCEEEEEeeEEEEEccCCccccccCcccccc--ccccCCceEEeeeeeEeccccc-CCcCHHHHHHHHH
Confidence            899999775    899999999999 9999999999999975  5899999999999999999999 9999999999999


Q ss_pred             HHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccceecC
Q 031855           77 RFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC  152 (152)
Q Consensus        77 ~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~eeK~  152 (152)
                      +|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||+||||+||||||+||||
T Consensus        90 ~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GEsmd~dgmvvl~~Yredg~tP~~~f~K~GL~eeK~  168 (168)
T 1h6q_A           90 GYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEKF  168 (168)
T ss_dssp             HHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEEEEESTTCEEECC
T ss_pred             HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCCCCeEEEEEcccceeecC
Confidence            9999999999   689999999999999999999999999999999999999999999999999999999999999998

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A

Probab=100.00  E-value=2.8e-69  Score=427.24  Aligned_cols=149  Identities=32%  Similarity=0.597  Sum_probs=121.3

Q ss_pred             ceeeeeeee-----eEEEEEEEEEEecccccc---ccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHH
Q 031855            2 IFINIERIL-----FFFKLHLQWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVT   73 (152)
Q Consensus         2 ~f~~~~~i~-----~~yeV~~k~vt~~~~~~d---iGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~   73 (152)
                      ||||+|++.     ++|||+||+|+|+++++|   ||||||||+++ +|++++++++|||||+|||||| |+||||+|++
T Consensus        15 m~SDsy~~~~~~dg~~yEV~gk~v~~~~g~idd~liGaN~SaE~~~-~eg~d~~~~~~vdiV~~~rLqe-t~fdKk~y~~   92 (174)
T 1yz1_A           15 MFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQE-TSFTKEAYKK   92 (174)
T ss_dssp             EEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCEE-ECCCHHHHHH
T ss_pred             EeecCcccEEccCCEEEEEeeEEEEecCCCccccccccCccccccc-ccccCcceEEcceeEeeccccc-cCcCHHHHHH
Confidence            799999873     799999999999999887   99999999864 6899999999999999999999 9999999999


Q ss_pred             HHHHHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEcccccee
Q 031855           74 YMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEV  150 (152)
Q Consensus        74 yiK~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~ee  150 (152)
                      |||+|||+|++||   +||||++|+++||++||+||+||+||||||||||||||||||++|||||+||||+||||||+||
T Consensus        93 yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg~tP~~~f~K~GL~ee  172 (174)
T 1yz1_A           93 YIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME  172 (174)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCEEEEEEGGGEEEE
T ss_pred             HHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCccEEEEEccCCCcCeEEEEEcccceee
Confidence            9999999999999   7999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 031855          151 KC  152 (152)
Q Consensus       151 K~  152 (152)
                      ||
T Consensus       173 K~  174 (174)
T 1yz1_A          173 KC  174 (174)
T ss_dssp             EC
T ss_pred             cC
Confidence            98

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A

Probab=100.00  E-value=2.4e-68  Score=420.74  Aligned_cols=146  Identities=29%  Similarity=0.547  Sum_probs=127.6

Q ss_pred             ceeeee----eee------eEEEEEEEEEEeccccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHH
Q 031855            2 IFINIE----RIL------FFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF   71 (152)
Q Consensus         2 ~f~~~~----~i~------~~yeV~~k~vt~~~~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y   71 (152)
                      ||||+|    ++.      ++|||+||+|++++++++||||||||++  +|++|  +++|||||+|||||| |+||||+|
T Consensus        13 m~SDsy~~~~~~k~~e~~~~~yEV~gk~v~~~~~~idiGaN~saE~~--~e~~d--~~~vvdIV~~~rL~e-t~f~Kk~y   87 (171)
T 1txj_A           13 VCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSEEAVD--GMGAD--VEQVIDIVDSFQLTS-TSLSKKEY   87 (171)
T ss_dssp             EEETTSCCBCGGGCGGGTTTEEEEECCEEESCC----------------CCCCS--SCEEEHHHHHHTCEE-ECCCHHHH
T ss_pred             EEeccccccCCccccccCCEEEEEEeEEEEECCCcccccCCcccccc--ccCcc--eeecceEEEecceee-cCCCHHHH
Confidence            799999    655      9999999999999999999999999975  47777  999999999999999 99999999


Q ss_pred             HHHHHHHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccc
Q 031855           72 VTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALK  148 (152)
Q Consensus        72 ~~yiK~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~  148 (152)
                      ++|||+|||+|++||   +||||++|+++||++||+||+||+|||||+||||||||||||++|||||+||||+||||||+
T Consensus        88 ~~yiK~YmK~i~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qFf~GESmd~dgmvvl~~Yredg~tP~~~f~K~GL~  167 (171)
T 1txj_A           88 SVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLY  167 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTCSSCEEEEEGGGEE
T ss_pred             HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccEeccCCCCCCceEEEEEecCCCCCeEEEEEcccce
Confidence            999999999999999   78999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecC
Q 031855          149 EVKC  152 (152)
Q Consensus       149 eeK~  152 (152)
                      ||||
T Consensus       168 eeK~  171 (171)
T 1txj_A          168 EEKF  171 (171)
T ss_dssp             EEEC
T ss_pred             eecC
Confidence            9998

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A

Probab=100.00  E-value=5.6e-66  Score=412.53  Aligned_cols=150  Identities=29%  Similarity=0.541  Sum_probs=143.8

Q ss_pred             ceeeeeeee----eEEEEEEEEEEecccccc-ccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCC--CHHHHHHH
Q 031855            2 IFINIERIL----FFFKLHLQWVVQGAVDVD-IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAF--DKKQFVTY   74 (152)
Q Consensus         2 ~f~~~~~i~----~~yeV~~k~vt~~~~~~d-iGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f--~Kk~y~~y   74 (152)
                      ||||+|++.    ++|||+||+|+|++++++ ||||||||+++++|++|+++++|||||+|||||| |+|  |||+|++|
T Consensus        13 mfSDsy~~k~vd~~~yEV~gK~v~~~~gdidl~GaN~SaE~~~~~eg~d~~~~~vvDIV~n~rLqe-t~f~~dKk~y~~y   91 (189)
T 2kwb_A           13 LSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVE-MNCYEDASMFKAY   91 (189)
T ss_dssp             CEEECCCCEEETTTEEEEECCEECCBTTBCCCCCCSCCCSSCCSSCCCGGGCSSEEHHHHTTTEEE-ECHHHHHHHHHHH
T ss_pred             EeecCccCEeeCCEEEEEeeEEEEECCccccccccCccccccccccccCCccEEcceeEEecceee-cccccCHHHHHHH
Confidence            899999775    899999999999999998 8999999985457999999999999999999999 999  99999999


Q ss_pred             HHHHHHHhccCC---ChHH--HHHHHHhhHHHHHHHHh--cCCCcceeecCCcCC---CceEEEEeccC-CC-cceEEEE
Q 031855           75 MKRFIKLLTPKL---SEER--QEIFKKNIEGATKFLLS--KLSDLQFFVGESMHD---DGCLVFAYYKE-GA-TDPTFLY  142 (152)
Q Consensus        75 iK~Y~K~vk~kL---~~e~--v~~Fk~~a~~~vK~il~--nfkd~qFf~Gesmd~---dgmv~l~~y~e-dg-~tP~~~f  142 (152)
                      ||+|||+|+++|   +|+|  |++|+++||++||+||+  ||+||||||||||||   ||||||++||| || +||||+|
T Consensus        92 iK~YmK~v~~kLee~~pe~e~v~~Fk~~a~~~vK~iL~k~~Fkd~qFf~GESmd~~~~dGmv~l~~Yre~dg~~tP~~~f  171 (189)
T 2kwb_A           92 IKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLML  171 (189)
T ss_dssp             HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCHHHHTTCEEEEEHHHHHHTSCCCEEEEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHhccccccCccEeccCCCCCCCCCceEEEEEEEcCCCCcCeEEEE
Confidence            999999999999   5777  99999999999999999  999999999999999   99999999999 99 9999999


Q ss_pred             EccccceecC
Q 031855          143 IADALKEVKC  152 (152)
Q Consensus       143 ~KdGL~eeK~  152 (152)
                      |||||+||||
T Consensus       172 fK~GL~eeK~  181 (189)
T 2kwb_A          172 VKEAIIEEKC  181 (189)
T ss_dssp             ETTTEEEECC
T ss_pred             EccCceEEEe
Confidence            9999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1yz1a1	172	b.88.1.2 (A:1-172) Translationally controlled tumo	2e-50
d1h6qa_	168	b.88.1.2 (A:) Translationally controlled tumor pro	8e-50
d1txja_	171	b.88.1.2 (A:) Translationally controlled tumor pro	6e-46

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 2e-50
 Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 18  QWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTY 74
           + V +   ++D   IG N SAEG  E EG +   +  VDIV    LQE   F K+ +  Y
Sbjct: 34  KMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVITGVDIVMNHHLQETS-FTKEAYKKY 91

Query: 75  MKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYY 131
           +K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y
Sbjct: 92  IKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY 151

Query: 132 KEGATDPTFLYIADALKEVKC 152
           +E    P  ++  D L+  KC
Sbjct: 152 REDGVTPYMIFFKDGLEMEKC 172

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 168

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  155 bits (393), Expect = 8e-50
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 6/134 (4%)

Query: 21  VQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIK 80
           V+   DVDIGANPSAE A+E    ++    V ++V +FRL     FDKK +++Y+K ++K
Sbjct: 37  VKQGGDVDIGANPSAEDAEE--NAEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYMK 93

Query: 81  LLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATD 137
            +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    
Sbjct: 94  AIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGIT 153

Query: 138 PTFLYIADALKEVK 151
           P  ++  D L   K
Sbjct: 154 PYMIFFKDGLVSEK 167

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]} Length = 171

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

 Score =  145 bits (367), Expect = 6e-46
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 8/144 (5%)

Query: 11  FFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQ 70
             F++     ++G  D  I  N      +  +G+     +V+DIVD+F+L    +  KK+
Sbjct: 32  IAFEVKSNKRIKGNDDYGIADNS----EEAVDGMGADVEQVIDIVDSFQLTS-TSLSKKE 86

Query: 71  FVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLV 127
           +  Y+K +++ +   L E   +R ++FK   +   K +L+   D +F++GES+  D  L 
Sbjct: 87  YSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLT 146

Query: 128 FAYYKEGATDPTFLYIADALKEVK 151
           ++YYK     P F+YI+D L E K
Sbjct: 147 YSYYKGEEVTPRFVYISDGLYEEK 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1h6qa_	168	Translationally controlled tumor protein TCTP (his	100.0
d1yz1a1	172	Translationally controlled tumor protein TCTP (his	100.0
d1txja_	171	Translationally controlled tumor protein TCTP (his	100.0

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.1e-67  Score=411.75  Aligned_cols=148  Identities=34%  Similarity=0.601  Sum_probs=141.3

Q ss_pred             ceeeeeeee----eEEEEEEEEEEecc-ccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHHHHH
Q 031855            2 IFINIERIL----FFFKLHLQWVVQGA-VDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMK   76 (152)
Q Consensus         2 ~f~~~~~i~----~~yeV~~k~vt~~~-~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~yiK   76 (152)
                      ||||+|++.    ++|||+||+||+++ ++++||||||||+++  |++++++++|||||+|||||| |+||||+|++|||
T Consensus        13 mfSDsyk~~~vd~~~yEV~gk~vt~~~~~d~~iGaN~saE~~~--e~~~~~~~~~vDiV~~~rL~e-t~f~Kk~y~~yiK   89 (168)
T d1h6qa_          13 LVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDIGANPSAEDAE--ENAEEGTETVNNLVYSFRLSP-TSFDKKSYMSYIK   89 (168)
T ss_dssp             CEETTTCEEECSSSEEEEECCEEEEECCCCSTTSCCCCCCSCS--CSSCCCEEEEEHHHHHTTCEE-CCCCHHHHHHHHH
T ss_pred             EeecCccCEEEcCEEEEEEeEEEEeecCcccccccCccccccc--CCCCCCceEEEEeeecccccc-CCCCHHHHHHHHH
Confidence            799999765    99999999999765 567899999999764  889999999999999999999 9999999999999


Q ss_pred             HHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccceecC
Q 031855           77 RFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC  152 (152)
Q Consensus        77 ~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~eeK~  152 (152)
                      +|||+|+++|   +||||+.|+++||++||+||+||+||||||||||||||||||++|||||+||+|+||||||+|||+
T Consensus        90 ~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~tP~~~f~KdGL~eeKy  168 (168)
T d1h6qa_          90 GYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEKF  168 (168)
T ss_dssp             HHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCCEECTTCCTTSCCEEEEECSSSSCEEEEEESTTCEEECC
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHhHHHHHHHHHhcCccceEeccCCCCCCceEEEEEecCCCcceEEEEEccceeeecC
Confidence            9999999999   799999999999999999999999999999999999999999999999999999999999999996

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-68  Score=417.67  Aligned_cols=149  Identities=32%  Similarity=0.597  Sum_probs=121.4

Q ss_pred             ceeeeeeee-----eEEEEEEEEEEecccccc---ccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHHHH
Q 031855            2 IFINIERIL-----FFFKLHLQWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVT   73 (152)
Q Consensus         2 ~f~~~~~i~-----~~yeV~~k~vt~~~~~~d---iGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y~~   73 (152)
                      ||||.|++.     ++|||+||+|++..+++|   ||||||||+++ +|++++++++|||||+|||||| |+||||+|++
T Consensus        13 ~~SDsy~~k~~~d~~~yEV~gk~v~~~~g~id~~liGaN~SaE~~~-~eg~~~~~~~~vDiV~~~rL~e-t~f~Kk~y~~   90 (172)
T d1yz1a1          13 MFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPE-GEGTESTVITGVDIVMNHHLQE-TSFTKEAYKK   90 (172)
T ss_dssp             EEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCEE-ECCCHHHHHH
T ss_pred             EeecCcccEecCCCeEEEEEeEEEEEcccccccccccCCccccccc-cccccccceeccCeEEeeeeee-cCCCHHHHHH
Confidence            799999764     799999999999998886   89999999865 7899999999999999999999 9999999999


Q ss_pred             HHHHHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEcccccee
Q 031855           74 YMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEV  150 (152)
Q Consensus        74 yiK~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~ee  150 (152)
                      |||+|||+|+++|   +|+||+.|+++||++||+||+||+||||||||||||||||||++|||||+||+|+||||||+||
T Consensus        91 yiK~YmK~v~~~L~e~~~e~v~~F~~~a~~~vK~il~~fkd~qFf~GeSmd~dgmvvl~~Yredg~tP~~~f~KdGL~ee  170 (172)
T d1yz1a1          91 YIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME  170 (172)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCEEEEEECTTSSCEEEEEEGGGEEEE
T ss_pred             HHHHHHHHHHHHHhhhCHHHHHHHHHHhHHHHHHHHhccccceEEccCCCCCCceEEEEEEcCCCcceEEEEEcCceeee
Confidence            9999999999999   8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 031855          151 KC  152 (152)
Q Consensus       151 K~  152 (152)
                      ||
T Consensus       171 Kc  172 (172)
T d1yz1a1         171 KC  172 (172)
T ss_dssp             EC
T ss_pred             cC
Confidence            99

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

Probab=100.00  E-value=2.2e-63  Score=390.82  Aligned_cols=146  Identities=29%  Similarity=0.562  Sum_probs=127.3

Q ss_pred             ceeeeeee----------eeEEEEEEEEEEeccccccccCCCCCCCCCCCCCcccceeEeeeeeeCcccccCCCCCHHHH
Q 031855            2 IFINIERI----------LFFFKLHLQWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQF   71 (152)
Q Consensus         2 ~f~~~~~i----------~~~yeV~~k~vt~~~~~~diGaN~sae~~~~de~~d~~~~~viDiV~~~rL~e~t~f~Kk~y   71 (152)
                      ||||+|++          +++|||+|+++++++++  +|+|||||++  +|++++++++|||||+|||||| |+||||+|
T Consensus        13 mfSDsyk~~~~~~~~d~~~~~~ev~~~~~~~~~~d--~~~~~~aee~--~eg~~~~~~~vvDiV~~~rLqe-t~f~Kk~y   87 (171)
T d1txja_          13 VCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDD--YGIADNSEEA--VDGMGADVEQVIDIVDSFQLTS-TSLSKKEY   87 (171)
T ss_dssp             EEETTSCCBCGGGCGGGTTTEEEEECCEEESCC------------------CCCCSSCEEEHHHHHHTCEE-ECCCHHHH
T ss_pred             EeeccccccccccccccccEEEEEEEEEEEecccc--cccCCCcccc--ccccCCcceEeeeeEEeeeeee-cCCCHHHH
Confidence            79999963          37999999999987655  5566666654  4788899999999999999999 99999999


Q ss_pred             HHHHHHHHHHhccCC---ChHHHHHHHHhhHHHHHHHHhcCCCcceeecCCcCCCceEEEEeccCCCcceEEEEEccccc
Q 031855           72 VTYMKRFIKLLTPKL---SEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALK  148 (152)
Q Consensus        72 ~~yiK~Y~K~vk~kL---~~e~v~~Fk~~a~~~vK~il~nfkd~qFf~Gesmd~dgmv~l~~y~edg~tP~~~f~KdGL~  148 (152)
                      ++|||+|||+|++||   +|+||+.|+++||++||+||+|||||||||||||||||||||++|||||+||+|+||||||+
T Consensus        88 ~~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il~nFkd~qFf~GESmd~dgmv~l~~yredg~tP~~~f~K~GL~  167 (171)
T d1txja_          88 SVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLY  167 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEEEECTTCCTTSCCEEEECCTTCSSCEEEEEGGGEE
T ss_pred             HHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCccceEeccCCCCCCceEEEEEecCCCcceEEEEEcccee
Confidence            999999999999999   89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecC
Q 031855          149 EVKC  152 (152)
Q Consensus       149 eeK~  152 (152)
                      |||+
T Consensus       168 eeKy  171 (171)
T d1txja_         168 EEKF  171 (171)
T ss_dssp             EEEC
T ss_pred             eecC
Confidence            9996