Citrus Sinensis ID: 031955

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLASNDDDAEHVGQNDESSDDEGMLYLPDLEKL
Secondary Structure (PSIPRED)
ccccccEEEEEcccEEEEEEEEcccccccEEEEEccEEEEEEcccccEEEEEEEEccccccccccEEEEcccEEEEEEEEccccccccccccccccccEEEEcccccccccccccccccccccHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccEEEEEEEEccccccEEEEccccEEEEEcccccccEEEEEEEEcccccccHccccccccEEEEEEEEccccccHHHcccccccccEEEEcccccccccccccccccccccHHHHHccccccccccccccccccHHcc
Coil and Loop (DISEMBL)
msrhpevlwaqrsdkvyltislpdakdisvkcepqgifgfsavgvqGELFDFSLELFgktlpekcktkvGLRNIICSVQKEEKGWWKRLLKseekpapyikvdwnkwcdeddegsnsdlasndddaehvgqndessddegmlylpdlekl
Flexible Loop (DISEMBL)
msrhpevlwaqrsdkvyLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTlpekcktkvglrniicsvqkeekgwWKRLlkseekpapyikvdwnkWCDEDDEGSNSDlasndddaehvgqndessddegmlYLPDLEKL
Low Complexity Region (SEG)
MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGsnsdlasndddaEHVGQNDESSDDEGMLYLPDLEKL
Disordered region (IsUnstruct)
******VLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCD*****************************************
Disordered Region (DISOPRED)
*SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDED********************************LPDLEKL
Disordered Region (DISEMBL)
MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCD*********LASN***************DEGMLYLPDLEKL
Disordered Region (DISPRO)
***HPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCD******************************GMLYLP*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLASNDDDAEHVGQNDESSDDEGMLYLPDLEKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q6ID70	150	Uncharacterized protein A	yes	no	0.973	0.973	0.751	7e-59
P0C8Z0	210	Uncharacterized protein O	N/A	no	0.793	0.566	0.516	8e-32
Q6YYB0	213	Uncharacterized protein O	no	no	0.793	0.558	0.516	8e-32
Q7SY06	359	Very-long-chain (3R)-3-hy	yes	no	0.7	0.292	0.387	2e-12
A7YY55	362	Very-long-chain (3R)-3-hy	yes	no	0.7	0.290	0.333	3e-10
Q5NVQ2	364	Very-long-chain (3R)-3-hy	yes	no	0.7	0.288	0.324	2e-09
Q9P035	362	Very-long-chain (3R)-3-hy	yes	no	0.7	0.290	0.324	2e-09
Q5ZM57	362	Very-long-chain (3R)-3-hy	yes	no	0.726	0.301	0.336	3e-09
Q8K2C9	362	Very-long-chain (3R)-3-hy	yes	no	0.706	0.292	0.309	5e-09
Q23280	175	Uncharacterized protein Z	yes	no	0.686	0.588	0.366	8e-09

>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1

 Score =  225 bits (574), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 129/149 (86%), Gaps = 3/149 (2%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSR+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK 
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           + E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E  NS+ A
Sbjct: 61  MTEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE-VNSETA 118

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S DD++  V Q+ ESSDD+G+LYLPDLEK
Sbjct: 119 S-DDESAFVNQDSESSDDDGLLYLPDLEK 146

Arabidopsis thaliana (taxid: 3702)

>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAV-GVQGELFDFSLELFGK 59
           MSRHPEV WAQR DKVY+T+ L DAKD  V  EP+G+F FSA  G  G L++  LEL  K
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 60  TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDL 119
              E+ K  VG+R+I C V+K E  WWK+L++ ++K   ++KVDW+KW DEDD+G++ ++
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAV-GVQGELFDFSLELFGK 59
           MSRHPEV WAQR DKVY+T+ L DAKD  V  EP+G+F FSA  G  G L++  LEL  K
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 60  TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDL 119
              E+ K  VG+R+I C V+K E  WWK+L++ ++K   ++KVDW+KW DEDD+G++ ++
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 6/111 (5%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGEL-FDFSLELFGKTL 61
           P V WAQR  ++YL + + DA+D+S+  E + I  F   G   +GE  ++FSLE      
Sbjct: 6   PHVYWAQRHGEIYLRVEISDAQDLSIGVE-ENILQFRGQGHGAKGENEYEFSLEFLKPVK 64

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           PE  K K   R +  +V+K+E+ WW RL K E+KP  ++  D+++W DE D
Sbjct: 65  PE-VKHKSTQRQVNITVRKQEEVWWNRLTKQEKKPL-FLAPDFDRWLDESD 113

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGE-LFDFSLELFGKTL 61
           P V WAQR  ++YL + L D ++ ++    + +  F A G   +G+ +++F LE      
Sbjct: 8   PHVYWAQRHHELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           PE    K+  R +  +VQK+E  WW+RL K E++P  ++  D+++W DE D
Sbjct: 67  PEPV-YKLTQRQVNITVQKKESQWWERLTKQEKRPL-FLAPDFDRWLDESD 115

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGE-LFDFSLELFGKTL 61
           P V WAQR  ++YL + L D ++ ++    + +  F A G   +G+ +++F LE      
Sbjct: 10  PHVYWAQRHRELYLRVELSDVQNPAISTT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 68

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           PE    K+  R +  +VQK+   WW+RL K E++P  ++  D+++W DE D
Sbjct: 69  PEPVY-KLTQRQVNITVQKKVSQWWERLTKQEKRPL-FLAPDFDRWLDESD 117

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGE-LFDFSLELFGKTL 61
           P V WAQR  ++YL + L D ++ ++    + +  F A G   +G+ +++F LE      
Sbjct: 8   PHVYWAQRHRELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           PE    K+  R +  +VQK+   WW+RL K E++P  ++  D+++W DE D
Sbjct: 67  PEPVY-KLTQRQVNITVQKKVSQWWERLTKQEKRPL-FLAPDFDRWLDESD 115

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)

Query: 2   SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGE-LFDFSLELFGK 59
           S  P V WAQR  ++YL + L D K+  V      + F     G +G+ +++F +E    
Sbjct: 5   SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGHGAKGDNIYEFQIEFLEP 64

Query: 60  TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
             P K   +V  R +  +VQK+E  WW+RL K E++P  ++  D+++W DE D
Sbjct: 65  VEP-KPVCRVTQRQLNITVQKKESSWWERLTKQEKRPL-FLAPDFDRWLDESD 115

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Gallus gallus (taxid: 9031)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 4/110 (3%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGE-LFDFSLELFGKTLP 62
           P V WAQR  ++YL + L D ++ ++      + F     G +G+ +++F LE      P
Sbjct: 8   PHVYWAQRHRELYLRVELSDVQNPAISITDNVLHFKAQGHGAKGDNVYEFHLEFLDLVKP 67

Query: 63  EKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           E    ++  R +  +VQK+   WW+RL K E++P  ++  D+++W DE D
Sbjct: 68  EPA-YRLTQRQVNITVQKKGSHWWERLTKQEKRPL-FLAPDFDRWLDESD 115

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans GN=ZC395.10 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 6/109 (5%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGELFDFSLELFGK 59
           M++ P VLWAQR   VYLTI + +AK   +K E   + F  S+   + + ++ +LE F +
Sbjct: 1   MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSS---KTDKYEATLEFFDE 57

Query: 60  TLPEKCK-TKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKW 107
             P   K T    R +  +VQK+   WW RLL+++ K   ++KVD+ KW
Sbjct: 58  IDPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGK-VHWLKVDFGKW 105

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
351725285	151	uncharacterized protein LOC100527476 [Gl	0.986	0.980	0.791	2e-63
356563705	151	PREDICTED: uncharacterized protein At3g0	0.986	0.980	0.785	7e-62
224101097	151	predicted protein [Populus trichocarpa]	0.98	0.973	0.805	5e-60
224146046	151	predicted protein [Populus trichocarpa]	0.98	0.973	0.798	1e-59
449437769	151	PREDICTED: uncharacterized protein At3g0	0.966	0.960	0.763	3e-59
42570108	150	HSP20-like chaperon-like protein [Arabid	0.973	0.973	0.751	5e-57
346472615	153	hypothetical protein [Amblyomma maculatu	0.986	0.967	0.715	1e-56
297828848	150	predicted protein [Arabidopsis lyrata su	0.973	0.973	0.724	2e-56
260656112	150	Chain A, Solution Structure Of At3g03773	0.966	0.966	0.75	3e-56
238479640	204	HSP20-like chaperon-like protein [Arabid	0.973	0.715	0.744	3e-56

>gi|351725285|ref|NP_001236575.1| uncharacterized protein LOC100527476 [Glycine max] gi|255632440|gb|ACU16570.1| unknown [Glycine max]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 118/149 (79%), Positives = 131/149 (87%), Gaps = 1/149 (0%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSRHPEVLWAQRSDKVYLT++LPDAKD+ VKCEPQG+F FSA GVQ + + FSLEL+G  
Sbjct: 1   MSRHPEVLWAQRSDKVYLTVALPDAKDVFVKCEPQGLFAFSASGVQDKAYSFSLELYGSI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
            PE CKTK GLRNI+CS+QK EKGWWKRLLKSEEKPAPY+KVDWNKWCDEDDE S SDL 
Sbjct: 61  EPEGCKTKSGLRNILCSIQKGEKGWWKRLLKSEEKPAPYLKVDWNKWCDEDDEESTSDLV 120

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           SN DDA+ VG++D SSDDEGMLYLPDLEK
Sbjct: 121 SN-DDAQFVGEDDRSSDDEGMLYLPDLEK 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563705|ref|XP_003550100.1| PREDICTED: uncharacterized protein At3g03773-like isoform 1 [Glycine max]

 Score =  241 bits (615), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 117/149 (78%), Positives = 131/149 (87%), Gaps = 1/149 (0%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSR+PEVLWAQRSDKVYLT++LPDAK++SVKCEPQG+F FSA GVQ E + FSLEL+G  
Sbjct: 1   MSRYPEVLWAQRSDKVYLTVALPDAKNVSVKCEPQGLFTFSASGVQEEAYSFSLELYGCI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
            PE CKTK GLRNI+CS+QK EKGWWKRLLKSEEKPAPY+KVDWN+WCDEDDE S SDL 
Sbjct: 61  EPEGCKTKSGLRNILCSIQKGEKGWWKRLLKSEEKPAPYLKVDWNRWCDEDDEESTSDLV 120

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S DDDA  VG++D SSDDEGMLYLPDLEK
Sbjct: 121 S-DDDARFVGEDDGSSDDEGMLYLPDLEK 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101097|ref|XP_002334308.1| predicted protein [Populus trichocarpa] gi|222870920|gb|EEF08051.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 120/149 (80%), Positives = 131/149 (87%), Gaps = 2/149 (1%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSRHPEVLWAQRSDKVYLTI+LPDAKD+SVKCE  G+F FSAVGVQGE FDFSLELFG  
Sbjct: 1   MSRHPEVLWAQRSDKVYLTIALPDAKDVSVKCEGGGLFSFSAVGVQGESFDFSLELFGNI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           +PE  KTKVGLRNIICS+QKEEK WWKRLLKSE KPAPYIKVDWNKW DEDDE S SD A
Sbjct: 61  VPEGSKTKVGLRNIICSIQKEEKVWWKRLLKSEGKPAPYIKVDWNKWFDEDDEKSASD-A 119

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S+D++A +  ++D SSDDEGMLYLPDLEK
Sbjct: 120 SDDNNAGYE-KDDGSSDDEGMLYLPDLEK 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146046|ref|XP_002325859.1| predicted protein [Populus trichocarpa] gi|222862734|gb|EEF00241.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 131/149 (87%), Gaps = 2/149 (1%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSRHPEVLWAQRSDKVYLTI+LPDAKD+SVKCE  G+F FSAVGVQGE FDFSLELFG  
Sbjct: 1   MSRHPEVLWAQRSDKVYLTIALPDAKDVSVKCEGGGLFSFSAVGVQGESFDFSLELFGNI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           +PE  KTKVGLRNIICS+QKEEK WWKRLLKSE KPAPYIKVDWNKW DEDDE S SD A
Sbjct: 61  VPEGSKTKVGLRNIICSIQKEEKVWWKRLLKSEGKPAPYIKVDWNKWFDEDDEKSASD-A 119

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S+D++A +  ++D SS+DEGMLYLPDLEK
Sbjct: 120 SDDNNAGYE-KDDGSSEDEGMLYLPDLEK 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437769|ref|XP_004136663.1| PREDICTED: uncharacterized protein At3g03773-like [Cucumis sativus] gi|449528339|ref|XP_004171162.1| PREDICTED: uncharacterized protein At3g03773-like [Cucumis sativus]

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 113/148 (76%), Positives = 130/148 (87%), Gaps = 3/148 (2%)

Query: 2   SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTL 61
           SR+PEVLWAQRSDKVYLT+SLPDAKDISVKCEP G+F FSA G+QG  FDF+LELFG  +
Sbjct: 3   SRNPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGSIV 62

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLAS 121
           PE CKTKV LRNIICS+QKE+KGWWKRLLK+EEKPAPY+KVDWNKWCDED+  S+S L S
Sbjct: 63  PEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDE--SDSALTS 120

Query: 122 NDDDAEHVGQNDESSDDEGMLYLPDLEK 149
            DD+ E++GQ+D S +D GMLYLPDLEK
Sbjct: 121 -DDELEYMGQDDGSGEDGGMLYLPDLEK 147

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570108|ref|NP_683525.2| HSP20-like chaperon-like protein [Arabidopsis thaliana] gi|73921112|sp|Q6ID70.1|Y3377_ARATH RecName: Full=Uncharacterized protein At3g03773 gi|48310264|gb|AAT41786.1| At3g03773 [Arabidopsis thaliana] gi|49823520|gb|AAT68743.1| hypothetical protein At3g03773 [Arabidopsis thaliana] gi|50198936|gb|AAT70471.1| At3g03773 [Arabidopsis thaliana] gi|61742697|gb|AAX55169.1| hypothetical protein At3g03773 [Arabidopsis thaliana] gi|332640465|gb|AEE73986.1| HSP20-like chaperon-like protein [Arabidopsis thaliana]

 Score =  225 bits (574), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 129/149 (86%), Gaps = 3/149 (2%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSR+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK 
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           + E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E  NS+ A
Sbjct: 61  MTEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE-VNSETA 118

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S DD++  V Q+ ESSDD+G+LYLPDLEK
Sbjct: 119 S-DDESAFVNQDSESSDDDGLLYLPDLEK 146

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346472615|gb|AEO36152.1| hypothetical protein [Amblyomma maculatum]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/151 (71%), Positives = 129/151 (85%), Gaps = 3/151 (1%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSR PEVLWAQRSDKVYLTISLPDAKD+ V  EP+G+F FSAVG QGE F+FSLEL+G  
Sbjct: 1   MSRQPEVLWAQRSDKVYLTISLPDAKDVPVNSEPEGMFSFSAVGAQGEPFNFSLELYGTI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSD-L 119
           +PE  K  +GLRNI+CSV+KE+KGWWKRLLK+EEKPAPYIKVDWNKWCDED+E   SD L
Sbjct: 61  VPEGSKVNIGLRNILCSVKKEKKGWWKRLLKTEEKPAPYIKVDWNKWCDEDEESDQSDSL 120

Query: 120 ASNDDDAEHVGQNDESSDDEGMLYLPDLEKL 150
           AS+DD+ ++V   +E SDD+G+LY+PDLEK+
Sbjct: 121 ASDDDEYDNV--EEEGSDDDGLLYIPDLEKV 149

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|297828848|ref|XP_002882306.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328146|gb|EFH58565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 128/149 (85%), Gaps = 3/149 (2%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           MSR+PEVLWAQRSDKVYLT++LPDAKDISVKCEP+G+F FSA+G QGE F+FSLEL+GK 
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPRGLFSFSALGAQGERFEFSLELYGKI 60

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           +PE  K  VGLRNII S+QKEEK WW RLLKSEEKPAPYIKVDWNKWCDED+E  +    
Sbjct: 61  MPEYRKN-VGLRNIIFSIQKEEKSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVKSE--T 117

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           ++DD++  V ++ ESSDD+G+LYLPDLEK
Sbjct: 118 ASDDESAFVNEDSESSDDDGLLYLPDLEK 146

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260656112|pdb|2KMW|A Chain A, Solution Structure Of At3g03773.1 Protein From Arabidopsis Thaliana

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 128/148 (86%), Gaps = 3/148 (2%)

Query: 2   SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTL 61
           SR+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK +
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLAS 121
            E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E  NS+ AS
Sbjct: 62  TEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE-VNSETAS 119

Query: 122 NDDDAEHVGQNDESSDDEGMLYLPDLEK 149
            DD++  V Q+ ESSDD+G+LYLPDLEK
Sbjct: 120 -DDESAFVNQDSESSDDDGLLYLPDLEK 146

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238479640|ref|NP_001154589.1| HSP20-like chaperon-like protein [Arabidopsis thaliana] gi|332640466|gb|AEE73987.1| HSP20-like chaperon-like protein [Arabidopsis thaliana]

 Score =  222 bits (566), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/149 (74%), Positives = 128/149 (85%), Gaps = 3/149 (2%)

Query: 1   MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
           M R+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK 
Sbjct: 55  MIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 114

Query: 61  LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA 120
           + E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E  NS+ A
Sbjct: 115 MTEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE-VNSETA 172

Query: 121 SNDDDAEHVGQNDESSDDEGMLYLPDLEK 149
           S DD++  V Q+ ESSDD+G+LYLPDLEK
Sbjct: 173 S-DDESAFVNQDSESSDDDGLLYLPDLEK 200

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
TAIR|locus:504955859	204	AT3G03773 "AT3G03773" [Arabido	0.973	0.715	0.704	1.5e-53
TAIR|locus:2133269	241	AT4G02450 "AT4G02450" [Arabido	0.86	0.535	0.435	3.5e-27
ZFIN|ZDB-GENE-040426-1200	404	ptplad1 "protein tyrosine phos	0.7	0.259	0.387	4e-15
WB|WBGene00022599	175	ZC395.10.2 [Caenorhabditis ele	0.733	0.628	0.368	1.3e-13
ASPGD|ASPL0000007850	210	AN6921 [Emericella nidulans (t	0.74	0.528	0.32	3.3e-13
UNIPROTKB|A7YY55	362	PTPLAD1 "Very-long-chain (3R)-	0.7	0.290	0.333	1e-12
UNIPROTKB|Q5ZM57	362	PTPLAD1 "Very-long-chain (3R)-	0.726	0.301	0.336	1.7e-12
UNIPROTKB|E1C4J4	364	PTPLAD1 "Very-long-chain (3R)-	0.726	0.299	0.336	1.7e-12
UNIPROTKB|G4MKS2	209	MGG_06669 "Uncharacterized pro	0.72	0.516	0.341	2.4e-12
UNIPROTKB|Q9P035	362	PTPLAD1 "Very-long-chain (3R)-	0.7	0.290	0.324	7.7e-12

TAIR|locus:504955859 AT3G03773 "AT3G03773" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 105/149 (70%), Positives = 119/149 (79%)

Query:     1 MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
             M R+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK 
Sbjct:    55 MIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 114

Query:    61 LPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGXXXXXX 120
             + E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E       
Sbjct:   115 MTEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE--VNSET 171

Query:   121 XXXXXXEHVGQNDESSDDEGMLYLPDLEK 149
                     V Q+ ESSDD+G+LYLPDLEK
Sbjct:   172 ASDDESAFVNQDSESSDDDGLLYLPDLEK 200

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2133269 AT4G02450 "AT4G02450" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 57/131 (43%), Positives = 81/131 (61%)

Query:     1 MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSA-VGVQGELFDFSLELFGK 59
             MSRHPEV WA+ ++K++LT+ L D KD  V  +P+G+F FSA VG +  +++  LEL  K
Sbjct:     1 MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query:    60 TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGXXXXX 119
                E+ K  +G R+I C ++K E   W +LL+ + KP  Y+KVDW+KW DEDDEG     
Sbjct:    61 VNVEESKINIGERSIFCIIEKAEPERWNKLLRVK-KPPHYVKVDWDKWVDEDDEGSAGAA 119

Query:   120 XXXXXXXEHVG 130
                    E +G
Sbjct:   120 DMDMAGMEGMG 130

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

ZFIN|ZDB-GENE-040426-1200 ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 4.0e-15, P = 4.0e-15
 Identities = 43/111 (38%), Positives = 65/111 (58%)

Query:     5 PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGEL-FDFSLELFGKTL 61
             P V WAQR  ++YL + + DA+D+S+  E + I  F   G   +GE  ++FSLE      
Sbjct:     6 PHVYWAQRHGEIYLRVEISDAQDLSIGVE-ENILQFRGQGHGAKGENEYEFSLEFLKPVK 64

Query:    62 PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
             PE  K K   R +  +V+K+E+ WW RL K E+KP  ++  D+++W DE D
Sbjct:    65 PE-VKHKSTQRQVNITVRKQEEVWWNRLTKQEKKPL-FLAPDFDRWLDESD 113

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

WB|WBGene00022599 ZC395.10.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 42/114 (36%), Positives = 65/114 (57%)

Query:     1 MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT 60
             M++ P VLWAQR   VYLTI + +AK   +K E   +  F     + + ++ +LE F + 
Sbjct:     1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLH-FQGSS-KTDKYEATLEFFDEI 58

Query:    61 LPEKCK-TKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDE 113
              P   K T    R +  +VQK+   WW RLL+++ K   ++KVD+ KW DED++
Sbjct:    59 DPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGK-VHWLKVDFGKWKDEDED 111

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0030016 "myofibril" evidence=IDA

ASPGD|ASPL0000007850 AN6921 [Emericella nidulans (taxid:162425)]

 Score = 149 (57.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
 Identities = 40/125 (32%), Positives = 65/125 (52%)

Query:     1 MSRH-PEVLWAQRS-----DKVYLTISLPDA----KDISVKCEPQGIFGFSAVGVQGELF 50
             + +H PEV WAQRS     ++ YL +S+  A     D  +   P  +  F+    +G  +
Sbjct:     4 LPQHTPEVTWAQRSSGTDAERNYLYVSIKAADVAKSDAKLDITPSNVT-FTGPSKKGVTY 62

Query:    51 DFSLELFGKTLPEKCKTKVGLRNIICSVQKEE--KGWWKRLLKSEEKPAPYIKVDWNKWC 108
               SL+L+    PE  K     R +   ++K+E  + +W RLLK E K   ++K D++KW 
Sbjct:    63 HVSLDLYADIEPENSKVNHSDREVELVLRKKELKEEYWPRLLK-ESKKVHFLKTDFDKWV 121

Query:   109 DEDDE 113
             DED++
Sbjct:   122 DEDEQ 126

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IEA

GO:0007346 "regulation of mitotic cell cycle" evidence=IEA

GO:0051972 "regulation of telomerase activity" evidence=IEA

UNIPROTKB|A7YY55 PTPLAD1 "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 37/111 (33%), Positives = 63/111 (56%)

Query:     5 PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGE-LFDFSLELFGKTL 61
             P V WAQR  ++YL + L D ++ ++    + +  F A G   +G+ +++F LE      
Sbjct:     8 PHVYWAQRHHELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66

Query:    62 PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
             PE    K+  R +  +VQK+E  WW+RL K E++P  ++  D+++W DE D
Sbjct:    67 PEPVY-KLTQRQVNITVQKKESQWWERLTKQEKRPL-FLAPDFDRWLDESD 115

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q5ZM57 PTPLAD1 "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 38/113 (33%), Positives = 61/113 (53%)

Query:     2 SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGE-LFDFSLELFGK 59
             S  P V WAQR  ++YL + L D K+  V      + F     G +G+ +++F +E    
Sbjct:     5 SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGHGAKGDNIYEFQIEFLEP 64

Query:    60 TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
               P K   +V  R +  +VQK+E  WW+RL K E++P  ++  D+++W DE D
Sbjct:    65 VEP-KPVCRVTQRQLNITVQKKESSWWERLTKQEKRPL-FLAPDFDRWLDESD 115

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|E1C4J4 PTPLAD1 "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 38/113 (33%), Positives = 61/113 (53%)

Query:     2 SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGE-LFDFSLELFGK 59
             S  P V WAQR  ++YL + L D K+  V      + F     G +G+ +++F +E    
Sbjct:     5 SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGHGAKGDNIYEFQIEFLEP 64

Query:    60 TLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
               P K   +V  R +  +VQK+E  WW+RL K E++P  ++  D+++W DE D
Sbjct:    65 VEP-KPVCRVTQRQLNITVQKKESSWWERLTKQEKRPL-FLAPDFDRWLDESD 115

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

UNIPROTKB|G4MKS2 MGG_06669 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 41/120 (34%), Positives = 64/120 (53%)

Query:     5 PEVLWAQRSDK-------VYLTISLPD--AKDISVKCEPQGIFGFSAVGVQGELFDFSLE 55
             PEVLWAQRS K       VYLTIS+PD  A ++ +  +P G+            +   LE
Sbjct:     8 PEVLWAQRSSKTEAEKNYVYLTISVPDVPASNLKLDLKPTGLTFTGHSDTLKRTYHLELE 67

Query:    56 LFGKTLPEKCKTKVGLRNIICSVQKEE--KGWWKRLLKSEEKPAPYIKVDWNKWCDEDDE 113
              + +  P    T    +N+   ++K+E  + +W RLLK  +K   ++K D++KW DED++
Sbjct:    68 FYDEIDPAASATHHTAKNVEMKLRKKELKEEYWPRLLKDSKK-VHFLKTDFDKWVDEDEQ 126

GO:0005634 "nucleus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0007346 "regulation of mitotic cell cycle" evidence=ISS

UNIPROTKB|Q9P035 PTPLAD1 "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 7.7e-12, P = 7.7e-12
 Identities = 36/111 (32%), Positives = 62/111 (55%)

Query:     5 PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG--VQGE-LFDFSLELFGKTL 61
             P V WAQR  ++YL + L D ++ ++    + +  F A G   +G+ +++F LE      
Sbjct:     8 PHVYWAQRHRELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66

Query:    62 PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
             PE    K+  R +  +VQK+   WW+RL K E++P  ++  D+++W DE D
Sbjct:    67 PEPVY-KLTQRQVNITVQKKVSQWWERLTKQEKRPL-FLAPDFDRWLDESD 115

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0005096 "GTPase activator activity" evidence=TAS

GO:0007257 "activation of JUN kinase activity" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0043547 "positive regulation of GTPase activity" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6ID70	Y3377_ARATH	No assigned EC number	0.7516	0.9733	0.9733	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	150
cd06465	108	cd06465, p23_hB-ind1_like, p23_like domain found i	2e-39
cd06463	84	cd06463, p23_like, Proteins containing this p23_li	5e-16
pfam04969	78	pfam04969, CS, CS domain	2e-10
cd00237	106	cd00237, p23, p23 binds heat shock protein (Hsp)90	3e-10
cd06466	84	cd06466, p23_CS_SGT1_like, p23_like domain similar	6e-05
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	5e-04

>gnl|CDD|107222 cd06465, p23_hB-ind1_like, p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

 Score =  128 bits (324), Expect = 2e-39
 Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 4/110 (3%)

Query: 5   PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGV-QGELFDFSLELFGKTLPE 63
           P VLWAQRSD VYLTI LPDAKD  +K EP  +  F A G   G+ ++F LE + +  PE
Sbjct: 1   PPVLWAQRSDVVYLTIELPDAKDPKIKLEPTSLS-FKAKGGGGGKKYEFDLEFYKEIDPE 59

Query: 64  KCKTKVGLRNIICSVQKEEKG-WWKRLLKSEEKPAPYIKVDWNKWCDEDD 112
           + K KV  R I   ++K+E G +W RL K + K  P++KVD++KW DED+
Sbjct: 60  ESKYKVTGRQIEFVLRKKEAGEYWPRLTKEKGKL-PWLKVDFDKWVDEDE 108

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity. Length = 108

>gnl|CDD|107220 cd06463, p23_like, Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

 Score = 68.1 bits (167), Expect = 5e-16
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 9  WAQRSDKVYLTISLPD--AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCK 66
          W Q  D+V +TI L D   KD+ V+  P+ +   S  G  G+ +    ELFG   PE+ K
Sbjct: 1  WYQTLDEVTITIPLKDVTKKDVKVEFTPKSLT-VSVKGGGGKEYLLEGELFGPIDPEESK 59

Query: 67 TKVGLRNIICSVQKEEKG-WWKRLL 90
            V  R I  +++K+E G WW RL 
Sbjct: 60 WTVEDRKIEITLKKKEPGEWWPRLE 84

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). hB-ind1 plays a role in the signaling pathway mediated by the small GTPase Rac1, NUDC is needed for nuclear movement, Melusin interacts with two splice variants of beta1 integrin, and NCB5OR plays a part in maintaining viable pancreatic beta cells. Length = 84

>gnl|CDD|218355 pfam04969, CS, CS domain

 Score = 53.0 bits (128), Expect = 2e-10
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 5  PEVLWAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTL 61
          P   W Q  D+V +TI L      KD+ V+ +P+ +   S  G  G+ +    ELFG   
Sbjct: 1  PRYDWYQTLDEVTITIPLKGVTKKKDVKVEIKPRSL-KVSIKGPGGKEYLLDGELFGPID 59

Query: 62 PEKCKTKVGLRNIICSVQK 80
          PE+   K+    +  +++K
Sbjct: 60 PEESSWKIEDTKVEITLKK 78

The CS and CHORD (pfam04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD. It has been suggested that the CS domain is a binding module for HSP90, implying that CS domain-containing proteins are involved in recruiting heat shock proteins to multiprotein assemblies. Length = 78

>gnl|CDD|107218 cd00237, p23, p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

 Score = 54.0 bits (130), Expect = 3e-10
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 4   HPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPE 63
             + LW  R D V++   + D+KD+ V  E   +  FS +          +EL+ +  P 
Sbjct: 1   PAKTLWYDRRDYVFIEFCVEDSKDVKVDFEKSKL-TFSCLNGDNVKIYNEIELYDRVDPN 59

Query: 64  KCKTKVGLRNIICSVQK-EEKGWWKRLLKSEEKPAPYIKVDWNKWCD 109
             K K   R+I+C ++K +E   W RL K + KP  ++ VD++ W D
Sbjct: 60  DSKHKRTDRSILCCLRKGKEGVAWPRLTKEKAKPN-WLSVDFDNWRD 105

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Length = 106

>gnl|CDD|107223 cd06466, p23_CS_SGT1_like, p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 9  WAQRSDKVYLTI--SLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCK 66
          W Q    V +TI     D +D+ V+   Q     S +   G  +   L+LFG   PE+ K
Sbjct: 2  WYQTDTSVTVTIYAKNVDKEDVKVEFNEQ-SLSVSIILPGGSEYQLELDLFGPIDPEQSK 60

Query: 67 TKVGLRNIICSVQKEEKGWWKRL 89
            V    +  +++K E G W  L
Sbjct: 61 VSVLPTKVEITLKKAEPGSWPSL 83

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies suggest that the interaction of hSgt1 with Hsp90 and Hsp70 may be regulated by S100A6 in a Ca2+ dependent fashion. This group also includes the p23_like domains of Melusin and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Melusin is a vertebrate protein which interacts with two splice variants of beta1 integrin, and NCB5OR plays a part in maintaining viable pancreatic beta cells. Length = 84

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 9  WAQRSDKVYLTISLP--DAKDISVKCEPQG--IFGFSAVGVQGEL----FDFSLELFGKT 60
          W Q  D+V +T+ LP    +DI V+ E     I G      + E     F+ S EL    
Sbjct: 1  WYQTDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREEEEERERSYGEFERSFELPEDV 60

Query: 61 LPEKCKTKVGLRNIICSVQK 80
           PEK K  +    +  ++ K
Sbjct: 61 DPEKSKASLENGVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG3158	180	consensus HSP90 co-chaperone p23 [Posttranslationa	100.0
cd00237	106	p23 p23 binds heat shock protein (Hsp)90 and parti	100.0
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	99.97
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	99.88
cd06488	87	p23_melusin_like p23_like domain similar to the C-	99.87
cd06468	92	p23_CacyBP p23_like domain found in proteins simil	99.85
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	99.84
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	99.83
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	99.77
cd06463	84	p23_like Proteins containing this p23_like domain	99.76
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	99.76
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	99.75
KOG1309	196	consensus Suppressor of G2 allele of skp1 [Signal	99.75
cd06493	85	p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear	99.74
cd06492	87	p23_mNUDC_like p23-like NUD (nuclear distribution)	99.69
cd06495	102	p23_NUDCD3_like p23-like NUD (nuclear distribution	99.69
cd06494	93	p23_NUDCD2_like p23-like NUD (nuclear distribution	99.67
cd06490	87	p23_NCB5OR p23_like domain found in NAD(P)H cytoch	99.62
KOG2265	179	consensus Nuclear distribution protein NUDC [Signa	99.31
KOG1667	320	consensus Zn2+-binding protein Melusin/RAR1, conta	99.3
cd00298	80	ACD_sHsps_p23-like This domain family includes the	99.18
KOG3260	224	consensus Calcyclin-binding protein CacyBP [Signal	99.0
COG5091	368	SGT1 Suppressor of G2 allele of skp1 and related p	98.53
KOG4379	596	consensus Uncharacterized conserved protein (tumor	98.24
COG0071	146	IbpA Molecular chaperone (small heat shock protein	98.11
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	97.88
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	97.5
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	97.45
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	97.44
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	96.4
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	96.37
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	96.27
PRK10743	137	heat shock protein IbpA; Provisional	96.13
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	96.07
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	95.99
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	95.93
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	95.92
PRK11597	142	heat shock chaperone IbpB; Provisional	95.56
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	95.44
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	95.16
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	93.75
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	91.19
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	89.44
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	88.35

>KOG3158 consensus HSP90 co-chaperone p23 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=9.3e-37  Score=233.29  Aligned_cols=141  Identities=37%  Similarity=0.669  Sum_probs=119.1

Q ss_pred             CCCCCeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEec-CCCceEEEEEeccccccCCCceEEecCCeEEEEEEe
Q 031955            2 SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG-VQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQK   80 (150)
Q Consensus         2 s~~P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~-~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K   80 (150)
                      .++|.|.||||.+.|||||.+.++++++|++++. .|+|+|++ ++++.|+++|+||+.|+|++|++++++|.|.++|+|
T Consensus         5 ~~~p~v~Waqr~~~vyltv~Ved~~d~~v~~e~~-~l~fs~k~~~d~~~~~~~ief~~eIdpe~sk~k~~~r~if~i~~K   83 (180)
T KOG3158|consen    5 MQPPEVKWAQRRDLVYLTVCVEDAKDVHVNLEPS-KLTFSCKSGADNHKYENEIEFFDEIDPEKSKHKRTSRSIFCILRK   83 (180)
T ss_pred             ccCCcchhhhhcCeEEEEEEeccCccceeecccc-EEEEEeccCCCceeeEEeeehhhhcCHhhccccccceEEEEEEEc
Confidence            3689999999999999999999999999999999 99999997 567899999999999999999999999999999999


Q ss_pred             cCC-CcccceecccccCCCcceecCCccccCcccCCCCCCC----C----------CC---CcccccCCCCCCCCCccCc
Q 031955           81 EEK-GWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLA----S----------ND---DDAEHVGQNDESSDDEGML  142 (150)
Q Consensus        81 ~~~-~~W~rL~k~~~K~~~~lk~Dwdkw~deddee~~~~~~----~----------~~---~~~~~~~~~~~~~~~~~~~  142 (150)
                      ++. .+|||||+.+.|++ ||++||+||+||||+++..+.+    +          ..   +.++|++-++++++++   
T Consensus        84 ~e~~~~WprLtkeK~K~h-wLkvDFdkW~Dededde~~~~~~~g~a~g~~~~~~mggmgg~~~~Df~~~~~~~~~~d---  159 (180)
T KOG3158|consen   84 KELGEYWPRLTKEKAKLH-WLKVDFDKWVDEDEDDEAEDADGMGGAGGMDFSQMMGGMGGAEGVDFGVLEGDGADDD---  159 (180)
T ss_pred             cccccccchhhhcccccc-eEEcchhhccccccccchhhccccccccccchhhccccCCcccccccccccccccCCC---
Confidence            987 59999999999976 9999999999997554433221    1          11   1246666666666666   


Q ss_pred             CCCCcc
Q 031955          143 YLPDLE  148 (150)
Q Consensus       143 ~~~~~~  148 (150)
                       +|||+
T Consensus       160 -~~d~e  164 (180)
T KOG3158|consen  160 -MPDSE  164 (180)
T ss_pred             -CCCCC
Confidence             78876

>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

Probab=100.00  E-value=3.1e-35  Score=211.25  Aligned_cols=105  Identities=30%  Similarity=0.600  Sum_probs=98.7

Q ss_pred             CCCeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecCC
Q 031955            4 HPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEK   83 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~~   83 (150)
                      +|.+.||||.+.|+|||.++++++++|+|+++ +|+|+|.+.+|.+|.++|+||++|+|++|++++++|+|+|+|+|++.
T Consensus         1 ~p~v~WaQr~~~V~ltI~v~d~~d~~v~l~~~-~l~f~~~~~~g~~y~~~l~l~~~I~pe~Sk~~v~~r~ve~~L~K~~~   79 (106)
T cd00237           1 PAKTLWYDRRDYVFIEFCVEDSKDVKVDFEKS-KLTFSCLNGDNVKIYNEIELYDRVDPNDSKHKRTDRSILCCLRKGKE   79 (106)
T ss_pred             CCcceeeECCCEEEEEEEeCCCCCcEEEEecC-EEEEEEECCCCcEEEEEEEeecccCcccCeEEeCCceEEEEEEeCCC
Confidence            58999999999999999999999999999999 88999976567889999999999999999999999999999999986


Q ss_pred             C-cccceecccccCCCcceecCCccccC
Q 031955           84 G-WWKRLLKSEEKPAPYIKVDWNKWCDE  110 (150)
Q Consensus        84 ~-~W~rL~k~~~K~~~~lk~Dwdkw~de  110 (150)
                      + +||||++++.|++ ||++||+||+||
T Consensus        80 ~~~WprL~k~~~k~~-~lk~DfdkW~D~  106 (106)
T cd00237          80 GVAWPRLTKEKAKPN-WLSVDFDNWRDW  106 (106)
T ss_pred             CCCCchhhcCCCCCC-cEECcchhccCC
Confidence            5 9999999999965 999999999986

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=99.97  E-value=1.6e-30  Score=186.15  Aligned_cols=106  Identities=49%  Similarity=0.830  Sum_probs=98.9

Q ss_pred             CCeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEecC-CCceEEEEEeccccccCCCceEEecCCeEEEEEEecC-
Q 031955            5 PEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGV-QGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE-   82 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~~-~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~-   82 (150)
                      |.|.||||.+.|+|+|++++++++.|.|+++ +|+|++.+. +++.|.++++||++|+|++|+|++.+++|+|+|+|+. 
T Consensus         1 p~~~W~Qt~~~V~i~i~~~~~~~~~V~~~~~-~l~v~~~~~~~~~~y~~~~~L~~~I~pe~s~~~v~~~kveI~L~K~~~   79 (108)
T cd06465           1 PPVLWAQRSDVVYLTIELPDAKDPKIKLEPT-SLSFKAKGGGGGKKYEFDLEFYKEIDPEESKYKVTGRQIEFVLRKKEA   79 (108)
T ss_pred             CceeeeECCCEEEEEEEeCCCCCcEEEEECC-EEEEEEEcCCCCeeEEEEeEhhhhccccccEEEecCCeEEEEEEECCC
Confidence            7899999999999999999999999999999 889998763 4677999999999999999999999999999999999 


Q ss_pred             CCcccceecccccCCCcceecCCccccCcc
Q 031955           83 KGWWKRLLKSEEKPAPYIKVDWNKWCDEDD  112 (150)
Q Consensus        83 ~~~W~rL~k~~~K~~~~lk~Dwdkw~dedd  112 (150)
                      +++|+||++++.|++ |+++||+||.||||
T Consensus        80 ~~~W~~L~~~~~k~~-~~~~d~~~w~d~~~  108 (108)
T cd06465          80 GEYWPRLTKEKGKLP-WLKVDFDKWVDEDE  108 (108)
T ss_pred             CCCCcccccCCCCCC-ceECCchhcccCCC
Confidence            789999999999965 99999999999965

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=99.88  E-value=1.4e-22  Score=138.76  Aligned_cols=82  Identities=24%  Similarity=0.374  Sum_probs=76.5

Q ss_pred             EEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecCCCc
Q 031955            8 LWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGW   85 (150)
Q Consensus         8 ~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~~~~   85 (150)
                      +||||.+.|+|+|+++++  +++.|+|+++ +|+|++.+.++++|.++++||++|+|++|++++.+++|+|+|+|+++++
T Consensus         1 dW~Q~~~~V~iti~~k~~~~~~~~v~~~~~-~l~~~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~~~   79 (84)
T cd06489           1 DWYQTESQVVITILIKNVKPEDVSVEFEKR-ELSATVKLPSGNDYSLKLHLLHPIVPEQSSYKILSTKIEIKLKKTEAIR   79 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEeCC-EEEEEEECCCCCcEEEeeecCceecchhcEEEEeCcEEEEEEEcCCCCC
Confidence            599999999999999998  8999999999 8899987655678999999999999999999999999999999998889


Q ss_pred             cccee
Q 031955           86 WKRLL   90 (150)
Q Consensus        86 W~rL~   90 (150)
                      |+||+
T Consensus        80 W~~Le   84 (84)
T cd06489          80 WSKLE   84 (84)
T ss_pred             CccCC
Confidence            99995

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins

Probab=99.87  E-value=1.3e-21  Score=135.32  Aligned_cols=85  Identities=19%  Similarity=0.284  Sum_probs=76.1

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecC
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      .|++||||++.|+|+|+++++  +++.|.++++ .++|++...++..|.+.++||++|+|+.|++++.+++|+|+|+|++
T Consensus         1 ~R~dW~Qs~~~V~ItI~~k~~~~~~~~v~~~~~-~l~v~~~~~~~~~y~~~l~L~~~I~~~~s~~~v~~~kvei~L~K~~   79 (87)
T cd06488           1 CRHDWHQTGSHVVVSVYAKNSNPELSVVEANST-VLTIHIVFEGNKEFQLDIELWGVIDVEKSSVNMLPTKVEIKLRKAE   79 (87)
T ss_pred             CCccEeeCCCEEEEEEEECcCCccceEEEecCC-EEEEEEECCCCceEEEEeeccceEChhHcEEEecCcEEEEEEEeCC
Confidence            479999999999999999865  6788999888 7788776445678999999999999999999999999999999999


Q ss_pred             CCccccee
Q 031955           83 KGWWKRLL   90 (150)
Q Consensus        83 ~~~W~rL~   90 (150)
                      +++||+|+
T Consensus        80 ~~~W~~Le   87 (87)
T cd06488          80 PGSWAKLE   87 (87)
T ss_pred             CCcCccCC
Confidence            88999995

Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C

>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP)

Probab=99.85  E-value=1.1e-20  Score=130.99  Aligned_cols=84  Identities=25%  Similarity=0.457  Sum_probs=76.9

Q ss_pred             CeEEEecCCEEEEEEEcCCC-----CCceEEEecccEEEEEEecCCCceEEEEEe-ccccccCCCceEEecCCeEEEEEE
Q 031955            6 EVLWAQRSDKVYLTISLPDA-----KDISVKCEPQGIFGFSAVGVQGELFDFSLE-LFGKTLPEKCKTKVGLRNIICSVQ   79 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~-----kd~~V~~~~~~~l~f~~~~~~~~~y~~~le-Lf~~I~pe~S~~~i~~~kI~i~L~   79 (150)
                      +|.|+||.+.|+|+|+++++     +++.|+|+++ +|.|++.+..|.+|.+.+. ||++|+|++|+|++.+++|+|+|+
T Consensus         3 ~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~~-~l~v~~~~~~~~~~~~~~~~L~~~I~~e~s~~~~~~~ki~i~L~   81 (92)
T cd06468           3 KYAWDQSDKFVKIYITLKGVHQLPKENIQVEFTER-SFELKVHDLNGKNYRFTINRLLKKIDPEKSSFKVKTDRIVITLA   81 (92)
T ss_pred             eeeeecCCCEEEEEEEccCCCcCCcccEEEEecCC-EEEEEEECCCCcEEEEEehHhhCccCccccEEEEeCCEEEEEEE
Confidence            68999999999999999975     6789999998 8899887656788999997 999999999999999999999999


Q ss_pred             ecCCCccccee
Q 031955           80 KEEKGWWKRLL   90 (150)
Q Consensus        80 K~~~~~W~rL~   90 (150)
                      |+++++|++|+
T Consensus        82 K~~~~~W~~L~   92 (92)
T cd06468          82 KKKEKKWESLT   92 (92)
T ss_pred             eCCCCccCccC
Confidence            99989999995

CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=99.84  E-value=5.6e-21  Score=161.49  Aligned_cols=106  Identities=24%  Similarity=0.322  Sum_probs=89.6

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecC
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      +++.|||+.+.|+|+|+++++  .++.|+|+++ .|++++...++..|.+.+.||++|+|+.|++++.+++|+|+|+|++
T Consensus       157 ~r~dWyQs~~~V~i~i~~k~~~~~~~~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~Kiei~l~K~~  235 (356)
T PLN03088        157 YRHEFYQKPEEVVVTVFAKGVPAENVNVDFGEQ-ILSVVIEVPGEDAYHLQPRLFGKIIPDKCKYEVLSTKIEIRLAKAE  235 (356)
T ss_pred             cccceeecCCEEEEEEEecCCChHHcEEEeecC-EEEEEEecCCCcceeecccccccccccccEEEEecceEEEEEecCC
Confidence            689999999999999999986  6899999998 7788776545778999999999999999999999999999999999


Q ss_pred             CCcccceecccccC--C-----------------CcceecCCccccCc
Q 031955           83 KGWWKRLLKSEEKP--A-----------------PYIKVDWNKWCDED  111 (150)
Q Consensus        83 ~~~W~rL~k~~~K~--~-----------------~~lk~Dwdkw~ded  111 (150)
                      +..|++|+......  .                 .--++||+|+..+.
T Consensus       236 ~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~dWdk~~~~~  283 (356)
T PLN03088        236 PITWASLEYGKGPAVLPKPNVSSEVSQRPAYPSSKKKKDDWDKLEAEV  283 (356)
T ss_pred             CCCccccccCCccccccCCCCCcCcccCCCCCCCCCCCCChhhhhhhh
Confidence            88999999764321  0                 01257999997653

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=99.83  E-value=3.8e-20  Score=125.52  Aligned_cols=82  Identities=28%  Similarity=0.434  Sum_probs=75.0

Q ss_pred             EEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecCCCc
Q 031955            8 LWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGW   85 (150)
Q Consensus         8 ~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~~~~   85 (150)
                      +|+||.+.|+|+|+++++  +++.|.++++ +|.|++....++.|.++++||++|+|++|+|++.+++|+|+|+|+.+++
T Consensus         1 dW~Qt~~~v~i~v~~~~~~~~~v~v~~~~~-~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~vei~L~K~~~~~   79 (84)
T cd06466           1 DWYQTDTSVTVTIYAKNVDKEDVKVEFNEQ-SLSVSIILPGGSEYQLELDLFGPIDPEQSKVSVLPTKVEITLKKAEPGS   79 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEecC-EEEEEEECCCCCeEEEecccccccCchhcEEEEeCeEEEEEEEcCCCCC
Confidence            599999999999999997  7899999998 7888877533578999999999999999999999999999999999899


Q ss_pred             cccee
Q 031955           86 WKRLL   90 (150)
Q Consensus        86 W~rL~   90 (150)
                      ||||+
T Consensus        80 W~~L~   84 (84)
T cd06466          80 WPSLE   84 (84)
T ss_pred             CccCC
Confidence            99985

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=99.77  E-value=7.7e-18  Score=111.80  Aligned_cols=75  Identities=27%  Similarity=0.380  Sum_probs=67.0

Q ss_pred             CCeEEEecCCEEEEEEEcCCC----CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEe
Q 031955            5 PEVLWAQRSDKVYLTISLPDA----KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQK   80 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~----kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K   80 (150)
                      |+|.|+||.+.|+|+|.+++.    +++.|+|+++ +|.|++...+++.|.++++||++|+|++|+|++.+++|+|+|+|
T Consensus         1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~~-~l~v~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~i~i~L~K   79 (79)
T PF04969_consen    1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTDT-SLSVSIKSGDGKEYLLEGELFGEIDPDESTWKVKDNKIEITLKK   79 (79)
T ss_dssp             SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEETT-EEEEEEEETTSCEEEEEEEBSS-BECCCEEEEEETTEEEEEEEB
T ss_pred             CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEee-EEEEEEEccCCceEEEEEEEeeeEcchhcEEEEECCEEEEEEEC
Confidence            899999999999999999654    7999999999 88999875455899999999999999999999999999999998

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=99.76  E-value=5.3e-18  Score=113.26  Aligned_cols=81  Identities=38%  Similarity=0.599  Sum_probs=74.6

Q ss_pred             EEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecCC-Cc
Q 031955            9 WAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEK-GW   85 (150)
Q Consensus         9 WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~~-~~   85 (150)
                      |+|+.+.|+|+|.++++  +++.|.++++ .|+|++.+..+..|.++++||++|+|++|+|++.+++|+|+|+|+.+ .+
T Consensus         1 W~Q~~~~v~i~v~~~~~~~~~~~v~~~~~-~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~~~~~   79 (84)
T cd06463           1 WYQTLDEVTITIPLKDVTKKDVKVEFTPK-SLTVSVKGGGGKEYLLEGELFGPIDPEESKWTVEDRKIEITLKKKEPGEW   79 (84)
T ss_pred             CcccccEEEEEEEcCCCCccceEEEEecC-EEEEEeeCCCCCceEEeeEccCccchhhcEEEEeCCEEEEEEEECCCCCC
Confidence            99999999999999997  8999999988 78998875336789999999999999999999999999999999998 69


Q ss_pred             cccee
Q 031955           86 WKRLL   90 (150)
Q Consensus        86 W~rL~   90 (150)
                      |++|+
T Consensus        80 W~~l~   84 (84)
T cd06463          80 WPRLE   84 (84)
T ss_pred             CcccC
Confidence            99985

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=99.76  E-value=5.2e-18  Score=113.79  Aligned_cols=76  Identities=24%  Similarity=0.478  Sum_probs=66.6

Q ss_pred             EEecCCEEEEEEEcCCCC--CceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecCCCcc
Q 031955            9 WAQRSDKVYLTISLPDAK--DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEEKGWW   86 (150)
Q Consensus         9 WaQ~~~~V~ltV~l~d~k--d~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~~~~W   86 (150)
                      |+||.+.|+|+|.+++++  ++.|.++++ .|.+++     .+|.+.++||++|+|++|++++.+++|+|+|.|+++++|
T Consensus         1 W~Qt~~~v~i~i~~p~v~~~~v~v~~~~~-~l~i~~-----~~~~~~~~l~~~I~~e~~~~~~~~~~l~i~L~K~~~~~W   74 (78)
T cd06469           1 WSQTDEDVKISVPLKGVKTSKVDIFCSDL-YLKVNF-----PPYLFELDLAAPIDDEKSSAKIGNGVLVFTLVKKEPGIW   74 (78)
T ss_pred             CcccCCEEEEEEEeCCCccccceEEEecC-EEEEcC-----CCEEEEEeCcccccccccEEEEeCCEEEEEEEeCCCCcc
Confidence            999999999999999975  566667766 555543     569999999999999999999999999999999998999


Q ss_pred             ccee
Q 031955           87 KRLL   90 (150)
Q Consensus        87 ~rL~   90 (150)
                      +||.
T Consensus        75 ~~L~   78 (78)
T cd06469          75 EALC   78 (78)
T ss_pred             cccC
Confidence            9984

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=99.75  E-value=8.9e-18  Score=114.34  Aligned_cols=80  Identities=25%  Similarity=0.458  Sum_probs=71.7

Q ss_pred             eEEEecCCEEEEEEEcCCC---CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEEEEEecC
Q 031955            7 VLWAQRSDKVYLTISLPDA---KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIICSVQKEE   82 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d~---kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i~L~K~~   82 (150)
                      |.|+||.+.|+|+|.+++.   +++.|+++++ +|+|++.   +..+.+.+.||++|+|++|+|++.+ ++|+|+|+|++
T Consensus         1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~~-~l~v~~~---~~~~~l~~~L~~~I~~~~s~w~~~~~~~v~i~L~K~~   76 (85)
T cd06467           1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEITPK-HLKVGVK---GGEPLLDGELYAKVKVDESTWTLEDGKLLEITLEKRN   76 (85)
T ss_pred             CEEEeeCCEEEEEEECCCCCcceeEEEEEEcC-EEEEEEC---CCCceEcCcccCceeEcCCEEEEeCCCEEEEEEEECC
Confidence            6899999999999999864   8999999998 7788874   3457789999999999999999999 99999999999


Q ss_pred             C-Cccccee
Q 031955           83 K-GWWKRLL   90 (150)
Q Consensus        83 ~-~~W~rL~   90 (150)
                      + .+|++|.
T Consensus        77 ~~~~W~~L~   85 (85)
T cd06467          77 EGEWWPSLV   85 (85)
T ss_pred             CCccccccC
Confidence            8 5999984

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]

Probab=99.75  E-value=1.8e-18  Score=133.71  Aligned_cols=114  Identities=22%  Similarity=0.353  Sum_probs=95.3

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      .++++|||+...|+|||+.+++  +++.|.|+.+ .|++.+....|..|.+.+.||++|+|+.|++++.+.+|+|+|.|.
T Consensus         3 k~r~DwyQt~~~vvIti~~k~v~~~~v~v~~s~~-~l~~~~~~~~g~~~~l~~~L~~~I~pe~~s~k~~stKVEI~L~K~   81 (196)
T KOG1309|consen    3 KIRHDWYQTETSVVITIFAKNVPKEDVNVEISEN-TLSIVIQLPSGSEYNLQLKLYHEIIPEKSSFKVFSTKVEITLAKA   81 (196)
T ss_pred             cccceeecCCceEEEEEEecCCCccceeEEeecc-eEEEEEecCCchhhhhhHHhcccccccceeeEeeeeeEEEEeccc
Confidence            5799999999999999999997  5788888877 677777766788999999999999999999999999999999998


Q ss_pred             CCCcccceecccc---------------cCCCcceecCCccccCcccCCCCC
Q 031955           82 EKGWWKRLLKSEE---------------KPAPYIKVDWNKWCDEDDEGSNSD  118 (150)
Q Consensus        82 ~~~~W~rL~k~~~---------------K~~~~lk~Dwdkw~deddee~~~~  118 (150)
                      +...|..|+++++               .|..-.+.||++...|.+.+++.+
T Consensus        82 ~~irW~~Le~g~~~~~~~~~~vs~~~s~~Pssk~~kdWdkl~~e~~~eEe~e  133 (196)
T KOG1309|consen   82 EIIRWESLEKGKGSAVAPKPNVSSTASSYPSSKPAKDWDKLEKEEKKEEEDE  133 (196)
T ss_pred             cchhhhhhhcccCcccccccccccccccCCCCCcccCHHHHHHHhhhhhhcc
Confidence            8889999996442               111234899999998866554444

>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins

Probab=99.74  E-value=2.4e-17  Score=113.30  Aligned_cols=80  Identities=24%  Similarity=0.398  Sum_probs=68.2

Q ss_pred             eEEEecCCEEEEEEEcC-CC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEec-CCeEEEEEEecC
Q 031955            7 VLWAQRSDKVYLTISLP-DA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVG-LRNIICSVQKEE   82 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~-d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~-~~kI~i~L~K~~   82 (150)
                      |.|+||.+.|+|+|.+| ++  ++++|+|+++ +|.+.+.   +....++++||++|+|++|+|++. +++|+|+|.|++
T Consensus         1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~~-~l~v~~~---~~~~~~~g~L~~~I~~d~Stw~i~~~~~l~i~L~K~~   76 (85)
T cd06493           1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFLPD-HISIALK---DQAPLLEGKLYSSIDHESSTWIIKENKSLEVSLIKKD   76 (85)
T ss_pred             CccEEeCCEEEEEEECCCCCChhhEEEEEecC-EEEEEeC---CCCeEEeCcccCcccccCcEEEEeCCCEEEEEEEECC
Confidence            68999999999999997 43  8999999999 7788763   223348889999999999999986 567999999998


Q ss_pred             CC-ccccee
Q 031955           83 KG-WWKRLL   90 (150)
Q Consensus        83 ~~-~W~rL~   90 (150)
                      ++ +||+|.
T Consensus        77 ~~~~W~~L~   85 (85)
T cd06493          77 EGPTWPELV   85 (85)
T ss_pred             CCccccccC
Confidence            76 999984

NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.

>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins

Probab=99.69  E-value=1.9e-16  Score=109.85  Aligned_cols=80  Identities=21%  Similarity=0.349  Sum_probs=70.1

Q ss_pred             eEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEEEEEe
Q 031955            7 VLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIICSVQK   80 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i~L~K   80 (150)
                      |.|.||.+.|+|+|.++.     +++++|+++++ +|++...   |+.+.++++||++|+|++|+|++.+ +.|.|+|.|
T Consensus         1 Y~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~~-~l~v~~~---g~~~~i~G~L~~~V~~des~Wtled~~~l~i~L~K   76 (87)
T cd06492           1 YRWTQTLSEVELKVPFKVSFRLKGKDVVVDIQRK-HLKVGLK---GQPPIIDGELYNEVKVEESSWLIEDGKVVTVNLEK   76 (87)
T ss_pred             CccEeecCEEEEEEECCCCCCccceEEEEEEecC-EEEEEEC---CCceEEeCcccCcccccccEEEEeCCCEEEEEEEE
Confidence            679999999999999953     58999999999 7788764   5567799999999999999999986 579999999


Q ss_pred             cCCC-ccccee
Q 031955           81 EEKG-WWKRLL   90 (150)
Q Consensus        81 ~~~~-~W~rL~   90 (150)
                      ...+ |||+|+
T Consensus        77 ~~~~~wW~~l~   87 (87)
T cd06492          77 INKMEWWSRLV   87 (87)
T ss_pred             CCCCccccccC
Confidence            9765 999985

Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.

>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins

Probab=99.69  E-value=4.5e-16  Score=111.15  Aligned_cols=92  Identities=22%  Similarity=0.336  Sum_probs=78.3

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIICS   77 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i~   77 (150)
                      .++.|.|.||.+.|.|+|.+|.    +++++|+|+++ +|.+..++.++..-.++.+||++|++++|+|++.+ ..|.|+
T Consensus         3 ~~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~~-~l~v~~~~~~~~~~~i~G~L~~~V~~des~Wtled~~~l~I~   81 (102)
T cd06495           3 VRENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQSS-SIRVSVRDGGGEKVLMEGEFTHKINTENSLWSLEPGKCVLLS   81 (102)
T ss_pred             cCCceEEEeECCeEEEEEECCCCCccceEEEEEEEcC-EEEEEEecCCCCceEEeCcccCcccCccceEEEeCCCEEEEE
Confidence            4689999999999999999995    37999999999 88988864233333599999999999999999987 458999


Q ss_pred             EEecCCCcccceeccccc
Q 031955           78 VQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        78 L~K~~~~~W~rL~k~~~K   95 (150)
                      |.|....||++|.+++.+
T Consensus        82 L~K~~~~wW~~v~~g~~~   99 (102)
T cd06495          82 LSKCSEVWWNAVLKGEEE   99 (102)
T ss_pred             EEECCCcccchhhCCCCc
Confidence            999987799999997654

Little is known about the function of the proteins in this subgroup.

>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins

Probab=99.67  E-value=7.1e-16  Score=108.38  Aligned_cols=83  Identities=25%  Similarity=0.488  Sum_probs=72.6

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC---CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCe-EEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRN-IICSV   78 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d---~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~k-I~i~L   78 (150)
                      .++.|.|+||.+.|+|+|.++.   ++++.|.|+++ +|.+.+.   |.. .++++||++|+|++|+|++.+++ ++|.|
T Consensus         4 ~~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~~-~l~V~~~---g~~-~l~G~L~~~I~~destWtled~k~l~I~L   78 (93)
T cd06494           4 KTPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGSR-DISLAVK---GQE-VLKGKLFDSVVADECTWTLEDRKLIRIVL   78 (93)
T ss_pred             cCCCcEEEeEcCEEEEEEECCCCCceeeEEEEEEcC-EEEEEEC---CEE-EEcCcccCccCcccCEEEEECCcEEEEEE
Confidence            4689999999999999999985   47999999999 7788873   455 68889999999999999999988 69999


Q ss_pred             EecCCC---ccccee
Q 031955           79 QKEEKG---WWKRLL   90 (150)
Q Consensus        79 ~K~~~~---~W~rL~   90 (150)
                      .|.+..   +|++|+
T Consensus        79 ~K~~~~~~~~W~sl~   93 (93)
T cd06494          79 TKSNRDAGNCWKSLL   93 (93)
T ss_pred             EeCCCCCCccccccC
Confidence            999744   999874

Little is known about the function of the proteins in this subgroup.

>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins

Probab=99.62  E-value=5e-15  Score=102.57  Aligned_cols=81  Identities=14%  Similarity=0.144  Sum_probs=65.3

Q ss_pred             eEEEecCCEEEEEEEcCC--CCCce--EEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEec--CCeEEEEEEe
Q 031955            7 VLWAQRSDKVYLTISLPD--AKDIS--VKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVG--LRNIICSVQK   80 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d--~kd~~--V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~--~~kI~i~L~K   80 (150)
                      ++|||+.+.|+|+|+.+.  ..+..  +.++.+ .|+++..- .+..|.++++||++|+|+. ++++.  ++||||+|+|
T Consensus         1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~-~l~v~~~~-~~~~~~~~~~L~~~I~~~~-~~~~~~~~~KVEI~L~K   77 (87)
T cd06490           1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQR-ELRVEIIL-GDKSYLLHLDLSNEVQWPC-EVRISTETGKIELVLKK   77 (87)
T ss_pred             CCceECCCEEEEEEEEcccCCCCccEEEECCCC-EEEEEEEC-CCceEEEeeeccccCCCCc-EEEEcccCceEEEEEEc
Confidence            589999999999999884  34444  555665 66777653 3777999999999998764 88887  5699999999


Q ss_pred             cCCCccccee
Q 031955           81 EEKGWWKRLL   90 (150)
Q Consensus        81 ~~~~~W~rL~   90 (150)
                      +++..|++|.
T Consensus        78 ~e~~~W~~Lg   87 (87)
T cd06490          78 KEPEKWTSLG   87 (87)
T ss_pred             CCCCccccCc
Confidence            9999999983

NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.

>KOG2265 consensus Nuclear distribution protein NUDC [Signal transduction mechanisms]

Probab=99.31  E-value=7.1e-12  Score=96.65  Aligned_cols=89  Identities=19%  Similarity=0.351  Sum_probs=73.0

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSV   78 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L   78 (150)
                      -.+.|.|+||-..|.|.|.++.    ++++.|.+..+ +|.++.   .|++-.++++||++|++++|.|+|.++++.+++
T Consensus        17 ~~~~y~W~QtL~EV~i~i~vp~~~~ksk~v~~~Iq~~-hI~V~~---kg~~~ildG~L~~~vk~des~WtiEd~k~i~i~   92 (179)
T KOG2265|consen   17 DEEKYTWDQTLEEVEIQIPVPPGTAKSKDVHCSIQSK-HIKVGL---KGQPPILDGELSHSVKVDESTWTIEDGKMIVIL   92 (179)
T ss_pred             cccceeeeeehhheEEEeecCCCCcccceEEEEeeee-EEEEec---CCCCceecCccccccccccceEEecCCEEEEEE
Confidence            3579999999999999999984    46899999888 777765   456667999999999999999999987765555


Q ss_pred             EecCC--Ccccceeccccc
Q 031955           79 QKEEK--GWWKRLLKSEEK   95 (150)
Q Consensus        79 ~K~~~--~~W~rL~k~~~K   95 (150)
                      .|+..  .||.||+.+...
T Consensus        93 l~K~~~~eWW~~ll~gep~  111 (179)
T KOG2265|consen   93 LKKSNKMEWWDSLLEGEPE  111 (179)
T ss_pred             eeccchHHHHHHHHcCCCC
Confidence            55544  499999997754

>KOG1667 consensus Zn2+-binding protein Melusin/RAR1, contains CHORD domain [General function prediction only]

Probab=99.30  E-value=7.2e-12  Score=101.81  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=74.5

Q ss_pred             CCCeEEEecCCEEEEEEEcCCCCC--ceEEEecccEEEEEEec-CCCceEEEEEeccccccCCCceEEecCCeEEEEEEe
Q 031955            4 HPEVLWAQRSDKVYLTISLPDAKD--ISVKCEPQGIFGFSAVG-VQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQK   80 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~kd--~~V~~~~~~~l~f~~~~-~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K   80 (150)
                      ..|++|.||...|+|+|+.+.+-.  ..|+.++. .|.++++- ..+..|.++++|++.|++++|.+.+++++|+|+|+|
T Consensus       214 ~cR~Dwhqt~~~Vti~VY~k~~lpe~s~iean~~-~l~V~ivf~~gna~fd~d~kLwgvvnve~s~v~m~~tkVEIsl~k  292 (320)
T KOG1667|consen  214 KCRHDWHQTNGFVTINVYAKGALPETSNIEANGT-TLHVSIVFGFGNASFDLDYKLWGVVNVEESSVVMGETKVEISLKK  292 (320)
T ss_pred             cchhhhhhcCCeEEEEEEeccCCcccceeeeCCe-EEEEEEEecCCCceeeccceeeeeechhhceEEeecceEEEEEec
Confidence            468999999999999999998754  34555544 56666653 234689999999999999999999999999999999


Q ss_pred             cCCCcccceeccc
Q 031955           81 EEKGWWKRLLKSE   93 (150)
Q Consensus        81 ~~~~~W~rL~k~~   93 (150)
                      ++++.|+||....
T Consensus       293 ~ep~sWa~Le~p~  305 (320)
T KOG1667|consen  293 AEPGSWARLEFPP  305 (320)
T ss_pred             cCCCCcccccCCH
Confidence            9999999999743

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=99.18  E-value=1.8e-10  Score=74.62  Aligned_cols=71  Identities=30%  Similarity=0.403  Sum_probs=63.8

Q ss_pred             EEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-------CCceEEEEEeccccccCCCceEEecCCeEEEEEE
Q 031955            9 WAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-------QGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQ   79 (150)
Q Consensus         9 WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-------~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~   79 (150)
                      |+|+.+.++|+|.+++.  +++.|.++++ .|.|++...       ....|.+.+.|+++|+|+++++++.++.++|+|.
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~~~~-~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l~   79 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEVEDN-VLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENGVLEITLP   79 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECCEEEEEEc
Confidence            89999999999999997  7899999987 889988742       1468999999999999999999999999999998


Q ss_pred             e
Q 031955           80 K   80 (150)
Q Consensus        80 K   80 (150)
                      |
T Consensus        80 K   80 (80)
T cd00298          80 K   80 (80)
T ss_pred             C
Confidence            7

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>KOG3260 consensus Calcyclin-binding protein CacyBP [Signal transduction mechanisms]

Probab=99.00  E-value=5.6e-10  Score=86.96  Aligned_cols=85  Identities=21%  Similarity=0.344  Sum_probs=77.4

Q ss_pred             CeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEe-ccccccCCCceEEecCCeEEEEEEecC
Q 031955            6 EVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLE-LFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~le-Lf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      -|-|.|+...|.+.|.|.++  .+++|.|+|. +|.+.+...+|+.|.+.+. |.++|.||.|+.++....|.|.++|.+
T Consensus        76 ~ygWDQs~kfVK~yItL~GV~eenVqv~ftp~-Sldl~v~dlqGK~y~~~vnnLlk~I~vEks~~kvKtd~v~I~~kkVe  154 (224)
T KOG3260|consen   76 LYGWDQSNKFVKMYITLEGVDEENVQVEFTPM-SLDLKVHDLQGKNYRMIVNNLLKPISVEKSSKKVKTDTVLILCKKVE  154 (224)
T ss_pred             hcCccccCCeeEEEEEeecccccceeEEeccc-ceeeeeeecCCcceeeehhhhccccChhhcccccccceEEEeehhhh
Confidence            37899999999999999987  6899999999 7788887778999999996 999999999999999999999999988


Q ss_pred             CCcccceec
Q 031955           83 KGWWKRLLK   91 (150)
Q Consensus        83 ~~~W~rL~k   91 (150)
                      ..+|.-|+.
T Consensus       155 ~~rwd~Lt~  163 (224)
T KOG3260|consen  155 NTRWDYLTQ  163 (224)
T ss_pred             cccchHHHH
Confidence            889999984

>COG5091 SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only]

Probab=98.53  E-value=4.1e-08  Score=81.21  Aligned_cols=112  Identities=20%  Similarity=0.228  Sum_probs=85.0

Q ss_pred             CeEEEecCCEEEEEEEcCCCCCc--eEEEecccEEEEEEecCC-CceEEEEEeccccccCCCceEEecCCeEEEEEEecC
Q 031955            6 EVLWAQRSDKVYLTISLPDAKDI--SVKCEPQGIFGFSAVGVQ-GELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~kd~--~V~~~~~~~l~f~~~~~~-~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      +++|+||+.++.|-|+.+.+.+.  .+-++++ +|.++.+... +-.+.+.+.||++|.|+.+.+++.+.++++.|+|.+
T Consensus       178 ~yd~s~Ts~t~~ifiy~~pv~deqVs~~~e~N-TL~I~~q~~~~~~~~~~~~~Ly~ev~P~~~s~k~fsK~~e~~l~KV~  256 (368)
T COG5091         178 AYDFSETSDTAIIFIYRPPVGDEQVSPVLEGN-TLSISYQPRRLRLWNDITISLYKEVYPDIRSIKSFSKRVEVHLRKVE  256 (368)
T ss_pred             eeeccccceeEEEEEecCCCCccccceeecCC-cceeeeeccccchHHHhhhhhhhhcCcchhhhhhcchhheehhhhhh
Confidence            57788888888888888877654  4555777 6788776433 345677888999999999999999989999999998


Q ss_pred             CCcccceecccc----------c------C-CCcceecCCccccCcccCCCCC
Q 031955           83 KGWWKRLLKSEE----------K------P-APYIKVDWNKWCDEDDEGSNSD  118 (150)
Q Consensus        83 ~~~W~rL~k~~~----------K------~-~~~lk~Dwdkw~deddee~~~~  118 (150)
                      ...|..|.+...          +      | ....+.||++...+++-+++.+
T Consensus       257 ~v~W~~l~~~pa~~S~~l~~e~~N~~SAt~~s~~k~~Dw~~l~~~~~~dEe~p  309 (368)
T COG5091         257 MVRWGGLNGRPADESSRLSDEGKNSDSATPKSSKKQDDWKELMVEDSGDEENP  309 (368)
T ss_pred             hhhhcccccCccccccccccccccccccCCccccccccHHHhhhhhcccccCc
Confidence            889999986431          1      0 1247899999998866555554

>KOG4379 consensus Uncharacterized conserved protein (tumor antigen CML66 in humans) [Function unknown]

Probab=98.24  E-value=2.4e-06  Score=74.66  Aligned_cols=89  Identities=20%  Similarity=0.327  Sum_probs=72.5

Q ss_pred             CCCCCCeEEEecCCEEEEEEEcCC---CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEE
Q 031955            1 MSRHPEVLWAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIIC   76 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~V~ltV~l~d---~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i   76 (150)
                      |-.+|.|.|.|+.+.+.+++.++.   ++++.|.+.++ ++.+.    .+-.-.++.+||+.|.-|.|.+.|.. .++++
T Consensus       286 ~~~~p~y~w~qt~d~~~~~~~~p~~~~~~~i~Iq~~~~-~v~v~----~~dh~~~~g~lyasv~he~s~~ii~ean~Le~  360 (596)
T KOG4379|consen  286 NGGPPSYSWSQTDDNVLIRFNVPSTASAKEINIQGSKT-TVVVK----HLDHVIFDGELYASVGHELSAFIIAEANGLEL  360 (596)
T ss_pred             ccCCccceeeeccCcceEEEecccccccceEEEEecCc-eEEEE----eeeeEEeccchhhhccccchhhhhhhhccceE
Confidence            457899999999999999999995   36777888877 53333    23344588999999999999999875 99999


Q ss_pred             EEEecCCC-cccceecccc
Q 031955           77 SVQKEEKG-WWKRLLKSEE   94 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~   94 (150)
                      .|.|++.. .||||..+++
T Consensus       361 sl~K~de~~twprL~~~dk  379 (596)
T KOG4379|consen  361 SLTKADEIQTWPRLFAQDK  379 (596)
T ss_pred             EEeecccccccchheeecc
Confidence            99999765 8999997654

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=98.11  E-value=5.8e-05  Score=56.49  Aligned_cols=81  Identities=22%  Similarity=0.239  Sum_probs=69.3

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---------------CceEEEEEeccccccCCCc
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---------------GELFDFSLELFGKTLPEKC   65 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---------------~~~y~~~leLf~~I~pe~S   65 (150)
                      ..|.|..+++.+.+.|++.||++  +++.|.++.+ .|++++....               ...|+-.+.|-..|+|+..
T Consensus        39 ~~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~~-~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~  117 (146)
T COG0071          39 GTPPVDIEETDDEYRITAELPGVDKEDIEITVEGN-TLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVI  117 (146)
T ss_pred             CCCcEEEEEcCCEEEEEEEcCCCChHHeEEEEECC-EEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccce
Confidence            46999999999999999999997  5788888888 7888887422               2468888999999999988


Q ss_pred             eEEecCCeEEEEEEecCCC
Q 031955           66 KTKVGLRNIICSVQKEEKG   84 (150)
Q Consensus        66 ~~~i~~~kI~i~L~K~~~~   84 (150)
                      +.+..++-+.|+|.|..+.
T Consensus       118 ~A~~~nGvL~I~lpk~~~~  136 (146)
T COG0071         118 KAKYKNGLLTVTLPKAEPE  136 (146)
T ss_pred             eeEeeCcEEEEEEeccccc
Confidence            8889999999999998763

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=97.88  E-value=0.00018  Score=49.64  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=60.9

Q ss_pred             CeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---------------CceEEEEEeccccccCCCceEE
Q 031955            6 EVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---------------GELFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---------------~~~y~~~leLf~~I~pe~S~~~   68 (150)
                      ++.|+++.+.+.|++.||++  +++.|.+..++.|++++....               ...|.-.+.|-..|+++..+.+
T Consensus         1 ~~dv~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A~   80 (92)
T cd06472           1 RVDWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKAF   80 (92)
T ss_pred             CccEEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEEE
Confidence            57899999999999999997  477788765447888875310               1267778899999999988888


Q ss_pred             ecCCeEEEEEEe
Q 031955           69 VGLRNIICSVQK   80 (150)
Q Consensus        69 i~~~kI~i~L~K   80 (150)
                      +.++-+.|+|.|
T Consensus        81 ~~nGvL~I~lPK   92 (92)
T cd06472          81 LENGVLTVTVPK   92 (92)
T ss_pred             EECCEEEEEecC
Confidence            999999999976

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=97.50  E-value=0.0013  Score=45.13  Aligned_cols=74  Identities=20%  Similarity=0.170  Sum_probs=57.5

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC--------C---------ceEEEEEeccccccCCCc
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ--------G---------ELFDFSLELFGKTLPEKC   65 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~--------~---------~~y~~~leLf~~I~pe~S   65 (150)
                      |++.++++.+.+.|.+.||++  ++++|.+..+ .|++++....        +         ..|.-.+.|- .|+++..
T Consensus         1 ~~~di~e~~~~~~i~~~lPGv~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i   78 (93)
T cd06471           1 MKTDIKETDDEYIVEADLPGFKKEDIKLDYKDG-YLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEI   78 (93)
T ss_pred             CceeEEEcCCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHC
Confidence            578999999999999999997  5788888776 7888776321        0         1244556664 7888888


Q ss_pred             eEEecCCeEEEEEEe
Q 031955           66 KTKVGLRNIICSVQK   80 (150)
Q Consensus        66 ~~~i~~~kI~i~L~K   80 (150)
                      +.++.++-+.|+|.|
T Consensus        79 ~A~~~dGvL~I~lPK   93 (93)
T cd06471          79 KAKYENGVLKITLPK   93 (93)
T ss_pred             EEEEECCEEEEEEcC
Confidence            888999999999876

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=97.45  E-value=0.0015  Score=43.44  Aligned_cols=71  Identities=21%  Similarity=0.225  Sum_probs=59.4

Q ss_pred             EEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC--------------CceEEEEEeccccccCCCceEEecCC
Q 031955            9 WAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ--------------GELFDFSLELFGKTLPEKCKTKVGLR   72 (150)
Q Consensus         9 WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~--------------~~~y~~~leLf~~I~pe~S~~~i~~~   72 (150)
                      ++++.+.+.|.|.+|++  +++.|.+..+ .|.+++....              ...|.-.+.|-..|+++..+.++.++
T Consensus         2 i~e~~~~~~i~~~lpg~~~~~i~V~v~~~-~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~G   80 (88)
T cd06464           2 VYETDDAYVVEADLPGFKKEDIKVEVEDG-VLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLENG   80 (88)
T ss_pred             cEEcCCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeCC
Confidence            67889999999999997  5788888876 7788876321              35688999999999999999999999


Q ss_pred             eEEEEEEe
Q 031955           73 NIICSVQK   80 (150)
Q Consensus        73 kI~i~L~K   80 (150)
                      .+.|++.|
T Consensus        81 ~L~I~~pk   88 (88)
T cd06464          81 VLTITLPK   88 (88)
T ss_pred             EEEEEEcC
Confidence            99999875

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=97.44  E-value=0.0037  Score=43.30  Aligned_cols=75  Identities=20%  Similarity=0.250  Sum_probs=59.1

Q ss_pred             EEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---C----------CceEEEEEeccccccCCCceEEecCC
Q 031955            8 LWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---Q----------GELFDFSLELFGKTLPEKCKTKVGLR   72 (150)
Q Consensus         8 ~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~----------~~~y~~~leLf~~I~pe~S~~~i~~~   72 (150)
                      +|.++.+.+.|.+.+++.  ++++|++..+ .|.+++...   .          ...|.-.+.|-..|+++.-+.++.++
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~~~~-~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~~G   79 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKVDDN-KLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYENG   79 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEEETT-EEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEETTS
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEEecC-ccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEecCC
Confidence            588999999999999986  5788888877 788887642   1          13577788899999999989999999


Q ss_pred             eEEEEEEecCC
Q 031955           73 NIICSVQKEEK   83 (150)
Q Consensus        73 kI~i~L~K~~~   83 (150)
                      .+.|++.|...
T Consensus        80 vL~I~~pk~~~   90 (102)
T PF00011_consen   80 VLTITIPKKEE   90 (102)
T ss_dssp             EEEEEEEBSSS
T ss_pred             EEEEEEEcccc
Confidence            99999999865

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=96.40  E-value=0.038  Score=37.86  Aligned_cols=70  Identities=13%  Similarity=0.081  Sum_probs=56.2

Q ss_pred             EecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---C-----ceEEEEEeccccccCCCceEEe-cCCeEEEEE
Q 031955           10 AQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---G-----ELFDFSLELFGKTLPEKCKTKV-GLRNIICSV   78 (150)
Q Consensus        10 aQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L   78 (150)
                      +.+.+.+.|++.+|+.  +++.|++..+ .|++++....   +     ++|.-.+.|-..|++++-+.++ .++.+.|+|
T Consensus         6 ~e~~~~~~v~~dlpG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~   84 (86)
T cd06497           6 RSDRDKFTIYLDVKHFSPEDLTVKVLDD-YVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADGMLTFSG   84 (86)
T ss_pred             EEcCCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCCEEEEEe
Confidence            4678899999999997  4788888877 8899886311   1     3466678899999999999998 689999998


Q ss_pred             Ee
Q 031955           79 QK   80 (150)
Q Consensus        79 ~K   80 (150)
                      .|
T Consensus        85 PK   86 (86)
T cd06497          85 PK   86 (86)
T ss_pred             cC
Confidence            76

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=96.37  E-value=0.028  Score=37.85  Aligned_cols=66  Identities=12%  Similarity=0.152  Sum_probs=54.0

Q ss_pred             CEEEEEEEcCCC--CCceEEEecccEEEEEEecCC--------CceEEEEEeccccccCCCceEEecC-CeEEEEEEe
Q 031955           14 DKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ--------GELFDFSLELFGKTLPEKCKTKVGL-RNIICSVQK   80 (150)
Q Consensus        14 ~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~--------~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i~L~K   80 (150)
                      +.+.|++.||+.  ++++|.+..+ .|++++....        ...|.-.+.|-..|+++..+.++.. +.+.|++.|
T Consensus         7 ~~~~v~~dlpG~~~edI~v~v~~~-~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~Pk   83 (83)
T cd06526           7 EKFQVTLDVKGFKPEELKVKVSDN-KLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAPK   83 (83)
T ss_pred             eeEEEEEECCCCCHHHcEEEEECC-EEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCcEEEEEecC
Confidence            578999999997  5788888876 8899887321        1368888999999999998999987 889998875

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=96.27  E-value=0.044  Score=37.43  Aligned_cols=69  Identities=10%  Similarity=0.143  Sum_probs=55.6

Q ss_pred             cCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C---ceEEEEEeccccccCCCceEEec-CCeEEEEEEe
Q 031955           12 RSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G---ELFDFSLELFGKTLPEKCKTKVG-LRNIICSVQK   80 (150)
Q Consensus        12 ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~---~~y~~~leLf~~I~pe~S~~~i~-~~kI~i~L~K   80 (150)
                      +.+...|++.+|+.  +++.|++..+ .|++++....     +   .+|.=.+.|-..|++++-+.++. ++.+.|+|.|
T Consensus         5 ~~~~~~v~~dlpG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~lPk   83 (84)
T cd06498           5 EKDKFSVNLDVKHFSPEELKVKVLGD-FIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDGVLTVCGPR   83 (84)
T ss_pred             CCceEEEEEECCCCCHHHeEEEEECC-EEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCCEEEEEEeC
Confidence            56789999999997  5788888877 8899886311     1   24777788999999999999995 8999999987


Q ss_pred             c
Q 031955           81 E   81 (150)
Q Consensus        81 ~   81 (150)
                      +
T Consensus        84 ~   84 (84)
T cd06498          84 K   84 (84)
T ss_pred             C
Confidence            4

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>PRK10743 heat shock protein IbpA; Provisional

Probab=96.13  E-value=0.12  Score=38.55  Aligned_cols=75  Identities=5%  Similarity=0.090  Sum_probs=59.8

Q ss_pred             CCeEEEe-cCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---C----------ceEEEEEeccccccCCCceEE
Q 031955            5 PEVLWAQ-RSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---G----------ELFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         5 P~v~WaQ-~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---~----------~~y~~~leLf~~I~pe~S~~~   68 (150)
                      |.+.-++ +.+.+.|++.||++  +++.|.++.+ .|++++....   +          ..|.-.+.|-..|++++  .+
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~~~-~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~  111 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQDN-LLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--AN  111 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CE
Confidence            7889985 89999999999997  4788888876 8899886311   1          24666788999999983  77


Q ss_pred             ecCCeEEEEEEecC
Q 031955           69 VGLRNIICSVQKEE   82 (150)
Q Consensus        69 i~~~kI~i~L~K~~   82 (150)
                      ..++-+.|+|.|..
T Consensus       112 ~~dGVL~I~lPK~~  125 (137)
T PRK10743        112 LVNGLLYIDLERVI  125 (137)
T ss_pred             EeCCEEEEEEeCCC
Confidence            78899999999963

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=96.07  E-value=0.093  Score=35.91  Aligned_cols=70  Identities=10%  Similarity=0.100  Sum_probs=56.8

Q ss_pred             EEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC----C----ceEEEEEeccccccCCCceEEec-CCeEEE
Q 031955            8 LWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ----G----ELFDFSLELFGKTLPEKCKTKVG-LRNIIC   76 (150)
Q Consensus         8 ~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~----~----~~y~~~leLf~~I~pe~S~~~i~-~~kI~i   76 (150)
                      .++.+.+.+.|++.+|+.  ++++|++..+ .|++++....    +    ..|.-.+.|-..|++++.+-++. ++-+.|
T Consensus         4 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dGvL~I   82 (86)
T cd06475           4 EIRQTADRWKVSLDVNHFAPEELVVKTKDG-VVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDGILTV   82 (86)
T ss_pred             eEEEcCCeEEEEEECCCCCHHHEEEEEECC-EEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCCeEEE
Confidence            578899999999999997  4788888777 8899887421    1    34777788999999999999887 888888


Q ss_pred             EE
Q 031955           77 SV   78 (150)
Q Consensus        77 ~L   78 (150)
                      +|
T Consensus        83 ~l   84 (86)
T cd06475          83 EA   84 (86)
T ss_pred             Ee
Confidence            76

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=95.99  E-value=0.071  Score=36.19  Aligned_cols=69  Identities=12%  Similarity=0.091  Sum_probs=54.6

Q ss_pred             ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC-----ceEEEEEeccccccCCCceEEe-cCCeEEEEEE
Q 031955           11 QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG-----ELFDFSLELFGKTLPEKCKTKV-GLRNIICSVQ   79 (150)
Q Consensus        11 Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L~   79 (150)
                      .+.+.+.|++.+|+.  ++++|++..+ .|++++...   .+     ++|.-.+.|-..|+++.-+.++ .++.+.|++.
T Consensus         4 ~~~~~~~v~~dlpG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL~I~~P   82 (83)
T cd06478           4 LDKDRFSVNLDVKHFSPEELSVKVLGD-FVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADGVLTISGP   82 (83)
T ss_pred             ecCceEEEEEECCCCCHHHeEEEEECC-EEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCCEEEEEec
Confidence            467889999999987  5788888877 888888631   11     3477778899999999888888 4888999887


Q ss_pred             e
Q 031955           80 K   80 (150)
Q Consensus        80 K   80 (150)
                      |
T Consensus        83 K   83 (83)
T cd06478          83 R   83 (83)
T ss_pred             C
Confidence            6

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=95.93  E-value=0.062  Score=36.61  Aligned_cols=70  Identities=14%  Similarity=0.191  Sum_probs=56.0

Q ss_pred             EecCCEEEEEEEcCCC--CCceEEEecccEEEEEEec--CCC---ceEEEEEeccccccCCCceEEe-cCCeEEEEEEe
Q 031955           10 AQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVG--VQG---ELFDFSLELFGKTLPEKCKTKV-GLRNIICSVQK   80 (150)
Q Consensus        10 aQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~--~~~---~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L~K   80 (150)
                      +.+.+.+.|++.+|+.  +++.|++..+ .|++++..  ..+   ..|.=.+.|-..|+++.-+.++ ..+.+.|++.+
T Consensus         4 ~e~~~~~~v~~dlpG~~pedi~V~v~~~-~L~I~ger~~~~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~~   81 (81)
T cd06479           4 KTLGDTYQFAVDVSDFSPEDIIVTTSNN-QIEVHAEKLASDGTVMNTFTHKCQLPEDVDPTSVSSSLGEDGTLTIKARR   81 (81)
T ss_pred             cCcCCeEEEEEECCCCCHHHeEEEEECC-EEEEEEEEeccCCCEEEEEEEEEECCCCcCHHHeEEEecCCCEEEEEecC
Confidence            3567889999999987  5788888877 88888763  122   3577778899999999999997 78889998864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=95.92  E-value=0.18  Score=34.52  Aligned_cols=73  Identities=10%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             CCeEEEecC-CEEEEEEEcCCCC--CceEEEecccEEEEEEecCC--------------CceEEEEEeccccccCCCceE
Q 031955            5 PEVLWAQRS-DKVYLTISLPDAK--DISVKCEPQGIFGFSAVGVQ--------------GELFDFSLELFGKTLPEKCKT   67 (150)
Q Consensus         5 P~v~WaQ~~-~~V~ltV~l~d~k--d~~V~~~~~~~l~f~~~~~~--------------~~~y~~~leLf~~I~pe~S~~   67 (150)
                      |.+.=.++. +...|++.||+++  ++.|.+..+ .|++++....              -..|.-.+.|-..|+++  +.
T Consensus         1 p~~di~e~~~~~~~v~~~lPG~~kedi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A   77 (90)
T cd06470           1 PPYNIEKTGENNYRITLAVAGFSEDDLEIEVENN-QLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GA   77 (90)
T ss_pred             CCeeeEEcCCCeEEEEEECCCCCHHHeEEEEECC-EEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--ee
Confidence            456666775 8999999999985  677777766 7888875310              13477778888888875  67


Q ss_pred             EecCCeEEEEEEe
Q 031955           68 KVGLRNIICSVQK   80 (150)
Q Consensus        68 ~i~~~kI~i~L~K   80 (150)
                      +..++.+.|+|.+
T Consensus        78 ~~~~GvL~I~l~~   90 (90)
T cd06470          78 ELENGLLTIDLER   90 (90)
T ss_pred             EEeCCEEEEEEEC
Confidence            7788888888853

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=95.56  E-value=0.29  Score=36.85  Aligned_cols=75  Identities=11%  Similarity=0.123  Sum_probs=58.8

Q ss_pred             CCCeEEEe-cCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC----------ceEEEEEeccccccCCCceE
Q 031955            4 HPEVLWAQ-RSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG----------ELFDFSLELFGKTLPEKCKT   67 (150)
Q Consensus         4 ~P~v~WaQ-~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~----------~~y~~~leLf~~I~pe~S~~   67 (150)
                      .|.+.=++ +.+.+.|++.||++  +++.|.++.+ .|++++...   .+          ..|.-.+.|-..|+++  +-
T Consensus        32 ~P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~~~-~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--~A  108 (142)
T PRK11597         32 FPPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGT-RLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--GA  108 (142)
T ss_pred             CCcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEECC-EEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--cC
Confidence            47788887 46799999999997  4788888777 889988631   11          2466677888899997  57


Q ss_pred             EecCCeEEEEEEec
Q 031955           68 KVGLRNIICSVQKE   81 (150)
Q Consensus        68 ~i~~~kI~i~L~K~   81 (150)
                      ++.++-+.|+|.|.
T Consensus       109 ~~~nGVL~I~lPK~  122 (142)
T PRK11597        109 TFVNGLLHIDLIRN  122 (142)
T ss_pred             EEcCCEEEEEEecc
Confidence            78889999999986

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=95.44  E-value=0.13  Score=42.49  Aligned_cols=64  Identities=16%  Similarity=0.274  Sum_probs=51.1

Q ss_pred             cCCEEEEEEEcCCC---CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEec--CCeEEEEEE
Q 031955           12 RSDKVYLTISLPDA---KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVG--LRNIICSVQ   79 (150)
Q Consensus        12 ~~~~V~ltV~l~d~---kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~--~~kI~i~L~   79 (150)
                      +.+.+.|+|.||++   +++.++++++ .|.+.+.   +..|.|++.|-.+|+++.++.+..  .+.+.|+|.
T Consensus       259 ~p~~lvv~i~LP~~~s~~~i~LdV~~~-~l~l~~~---~~~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtlp  327 (328)
T PF08190_consen  259 SPEELVVEIELPGVESASDIDLDVSED-RLSLSSP---KPKYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTLP  327 (328)
T ss_pred             CCceEEEEEECCCcCccceeEEEEeCC-EEEEEeC---CCceEEEccCCCcccCCCceEEEccCCCEEEEEEE
Confidence            46789999999986   6788999998 6677663   337999999999999998866654  477888873

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=95.16  E-value=0.16  Score=34.57  Aligned_cols=68  Identities=15%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             cCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---C--C---ceEEEEEeccccccCCCceEEec-CCeEEEEEEe
Q 031955           12 RSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---Q--G---ELFDFSLELFGKTLPEKCKTKVG-LRNIICSVQK   80 (150)
Q Consensus        12 ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~--~---~~y~~~leLf~~I~pe~S~~~i~-~~kI~i~L~K   80 (150)
                      ..+...|++.+|+.  ++++|++..+ .|++++...   .  +   .+|.-.+.|-..|+++.-+.++. ++.+.|+|.|
T Consensus         5 ~~d~y~v~~dlpG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGvL~I~~Pr   83 (83)
T cd06476           5 EDDKYQVFLDVCHFTPDEITVRTVDN-LLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDGILCIQAPR   83 (83)
T ss_pred             cCCeEEEEEEcCCCCHHHeEEEEECC-EEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCCEEEEEecC
Confidence            35678899999997  4788888877 889988631   1  1   35666788999999999999996 8989998864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=93.75  E-value=0.58  Score=31.99  Aligned_cols=65  Identities=14%  Similarity=0.170  Sum_probs=49.6

Q ss_pred             CCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----C-C------ceEEEEEeccccccCCCceEEe-cCCeEEEE
Q 031955           13 SDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----Q-G------ELFDFSLELFGKTLPEKCKTKV-GLRNIICS   77 (150)
Q Consensus        13 ~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~-~------~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~   77 (150)
                      .+.+.|++.+|+.  +++.|++..+ .|++++...     . +      ..|.-.+.|-..|+++..+..+ .++.+.|.
T Consensus         6 ~d~~~v~~dlpG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I~   84 (87)
T cd06481           6 KEGFSLKLDVRGFSPEDLSVRVDGR-KLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGHLHIR   84 (87)
T ss_pred             cceEEEEEECCCCChHHeEEEEECC-EEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCceEEEE
Confidence            5678999999986  5788888877 889988621     0 1      2466677888999999888888 67777777


Q ss_pred             E
Q 031955           78 V   78 (150)
Q Consensus        78 L   78 (150)
                      +
T Consensus        85 ~   85 (87)
T cd06481          85 A   85 (87)
T ss_pred             c
Confidence            5

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=91.19  E-value=2  Score=29.27  Aligned_cols=65  Identities=8%  Similarity=0.016  Sum_probs=48.5

Q ss_pred             cCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----CC---ceEEEEEeccccccCCCceEEe-cCCeEEEE
Q 031955           12 RSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----QG---ELFDFSLELFGKTLPEKCKTKV-GLRNIICS   77 (150)
Q Consensus        12 ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~~---~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~   77 (150)
                      +.+...|++.||+.  ++++|++..+ .|++++...     .+   +.|.-.+.|-..|+++.-+.++ ..+-+.|.
T Consensus         5 ~~~~~~v~~dlpG~~~edI~V~v~~~-~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~   80 (83)
T cd06477           5 GKPMFQILLDVVQFRPEDIIIQVFEG-WLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDGILVVE   80 (83)
T ss_pred             CCceEEEEEEcCCCCHHHeEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCCEEEEE
Confidence            46788999999997  5788888888 889988631     11   2456667788999999888876 46666654

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=89.44  E-value=5.4  Score=31.23  Aligned_cols=73  Identities=19%  Similarity=0.190  Sum_probs=52.2

Q ss_pred             eEEEecCC-EEEEEEEcCCCC--C-ceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEecC
Q 031955            7 VLWAQRSD-KVYLTISLPDAK--D-ISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         7 v~WaQ~~~-~V~ltV~l~d~k--d-~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      +.=.++.+ ++.|...||++.  + +.|.+..+ ...+.+.  .+..|.-.+.|-.+ .++..++++.++-++|+|++.+
T Consensus        94 vdtre~dDge~~VvAdLPGVs~dd~idV~l~~d-~~~L~i~--~~~~~~krv~L~~~-~~e~~~~t~nNgILEIri~~~~  169 (177)
T PF05455_consen   94 VDTRERDDGELVVVADLPGVSDDDAIDVTLDDD-EGALTIR--VGEKYLKRVALPWP-DPEITSATFNNGILEIRIRRTE  169 (177)
T ss_pred             eeeEecCCCcEEEEEeCCCCCcccceeeEeecC-CceEEEe--cCCceEeeEecCCC-ccceeeEEEeCceEEEEEeecC
Confidence            33345566 688999999984  4 67888765 3344443  23446567888877 5777788899999999999977


Q ss_pred             C
Q 031955           83 K   83 (150)
Q Consensus        83 ~   83 (150)
                      .
T Consensus       170 ~  170 (177)
T PF05455_consen  170 E  170 (177)
T ss_pred             C
Confidence            4

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=88.35  E-value=4.6  Score=27.73  Aligned_cols=63  Identities=16%  Similarity=0.061  Sum_probs=45.6

Q ss_pred             CCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----CC------ceEEEEEeccccccCCCceEEecCC-eEEE
Q 031955           13 SDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----QG------ELFDFSLELFGKTLPEKCKTKVGLR-NIIC   76 (150)
Q Consensus        13 ~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~~------~~y~~~leLf~~I~pe~S~~~i~~~-kI~i   76 (150)
                      ++.++|++.||+.  +++.|++..+ .|++++...     .+      ..|.=.+.|-..|++++-+.++.+. .+.|
T Consensus         7 ~~~~~v~adlPG~~kedI~V~v~~~-~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i   83 (87)
T cd06482           7 SSNVLASVDVCGFEPDQVKVKVKDG-KVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVKI   83 (87)
T ss_pred             CCEEEEEEECCCCCHHHeEEEEECC-EEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEEE
Confidence            5689999999997  4788888876 889988631     11      1234456788889999888777754 5554

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	150
2kmw_A	150	Solution Structure Of At3g03773.1 Protein From Arab		5e-56
2cg9_X	134	Crystal Structure Of An Hsp90-Sba1 Closed Chaperone		1e-06
1ejf_A	125	Crystal Structure Of The Human Co-Chaperone P23 Len		2e-06

>pdb|2KMW|A Chain A, Solution Structure Of At3g03773.1 Protein From Arabidopsis Thaliana Length = 150

Iteration: 1
 Score =  213 bits (541), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 105/148 (70%), Positives = 119/148 (80%), Gaps = 3/148 (2%)
Query: 2   SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTL 61
           SR+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK +
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61
Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGXXXXXXX 121
            E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E        
Sbjct: 62  TEYRKN-VGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE--VNSETA 118
Query: 122 XXXXXEHVGQNDESSDDEGMLYLPDLEK 149
                  V Q+ ESSDD+G+LYLPDLEK
Sbjct: 119 SDDESAFVNQDSESSDDDGLLYLPDLEK 146

>pdb|2CG9|X Chain X, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 134

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 5   PEVLWAQRS-------DKVYLTISLPD--AKDISVKCEPQGIFGFSAVGVQGE---LFDF 52
           P+V WAQRS       + V +T+S+ D  A ++++K     +   S   V  E    +  
Sbjct: 7   PQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQSKPHVGDENVHHYQL 66
Query: 53  SLELFGKTLPEKCKTKV--GLRNIICSVQKE-EKGWWKRLLKSEEKPAPYIKVDWNKWCD 109
            ++L+ + +PEK   KV  G    +   +K+ E  +W RL K + K  PYIK D++KW D
Sbjct: 67  HIDLYKEIIPEKTMHKVANGQHYFLKLYKKDLESEYWPRLTKEKVK-YPYIKTDFDKWVD 125
Query: 110 EDDE 113
            D++
Sbjct: 126 ADEQ 129

>pdb|1EJF|A Chain A, Crystal Structure Of The Human Co-Chaperone P23 Length = 125

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 9   WAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFS-LELFGKTLPEKCKT 67
           W  R D V++   + D+KD++V  E   +  FS +G        + ++LF    P   K 
Sbjct: 8   WYDRRDYVFIEFCVEDSKDVNVNFEKSKL-TFSCLGGSDNFKHLNEIDLFHCIDPNDSKH 66
Query: 68  KVGLRNIICSVQKEEKGW-WKRLLKSEEKPAPYIKVDWNKWCDEDDEG 114
           K   R+I+C ++K E G  W RL K E     ++ VD+N W D +D+ 
Sbjct: 67  KRTDRSILCCLRKGESGQSWPRLTK-ERAKLNWLSVDFNNWKDWEDDS 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	6e-49
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	1e-36
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	3e-32
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	4e-19
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	2e-11
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	4e-07
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	6e-07
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	8e-06
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	3e-05

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana} Length = 150

 Score =  153 bits (388), Expect = 6e-49
 Identities = 107/149 (71%), Positives = 126/149 (84%), Gaps = 3/149 (2%)

Query: 2   SRHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTL 61
           SR+PEVLWAQRSDKVYLT++LPDAKDISVKCEPQG+F FSA+G QGE F+FSLEL+GK +
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 62  PEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLAS 121
            E  K  VGLRNII S+QKEE+ WW RLLKSEEKPAPYIKVDWNKWCDED+E   +   +
Sbjct: 62  TEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE--VNSETA 118

Query: 122 NDDDAEHVGQNDESSDDEGMLYLPDLEKL 150
           +DD++  V Q+ ESSDD+G+LYLPDLEK 
Sbjct: 119 SDDESAFVNQDSESSDDDGLLYLPDLEKA 147

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2 Length = 125

 Score =  121 bits (305), Expect = 1e-36
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 3   RHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLP 62
           +     W  R D V++   + D+KD++V  E   +      G         ++LF    P
Sbjct: 2   QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61

Query: 63  EKCKTKVGLRNIICSVQKEEKG-WWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLAS 121
              K K   R+I+C ++K E G  W RL K   K   ++ VD+N W D +D+ S+ D+++
Sbjct: 62  NDSKHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD-SDEDMSN 119

Query: 122 NDDDAE 127
            D  +E
Sbjct: 120 FDRFSE 125

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 134

 Score =  110 bits (277), Expect = 3e-32
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 16/127 (12%)

Query: 2   SRHPEVLWAQRS-------DKVYLTISLPDAKDISVKCEPQGIF-----GFSAVGVQGEL 49
             +P+V WAQRS       + V +T+S+ D     +  +P  I                 
Sbjct: 4   VINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQSKPHVGDENVHH 63

Query: 50  FDFSLELFGKTLPEKCKTKVGLRN---IICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNK 106
           +   ++L+ + +PEK   KV       +    +  E  +W RL K + K  PYIK D++K
Sbjct: 64  YQLHIDLYKEIIPEKTMHKVANGQHYFLKLYKKDLESEYWPRLTKEKVKY-PYIKTDFDK 122

Query: 107 WCDEDDE 113
           W D D++
Sbjct: 123 WVDADEQ 129

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3 Length = 114

 Score = 76.5 bits (188), Expect = 4e-19
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 9   WAQRSDKVYLTISLPDAK--DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCK 66
           W Q   +V +T+ + + +  D++V+   + +         GE ++  LEL    +PE+  
Sbjct: 14  WYQTESQVVITLMIKNVQKNDVNVEFSEKELS-ALVKLPSGEDYNLKLELLHPIIPEQST 72

Query: 67  TKVGLRNIICSVQKEEKGWWKRLLKSEEKPAP 98
            KV    I   ++K E   W++L    + P P
Sbjct: 73  FKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTP 104

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S* Length = 92

 Score = 56.0 bits (135), Expect = 2e-11
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 9  WAQRSDKVYLTISL--PDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCK 66
          + Q+ ++V +T+       +++++    Q +          + +     LFGK +P+KCK
Sbjct: 7  YYQKPEEVVVTVFAKGIPKQNVNIDFGEQILS-VVIEVPGEDAYYLQPRLFGKIIPDKCK 65

Query: 67 TKVGLRNIICSVQKEEKGWWKRLLKSE 93
           +V    I   + K +   W  L   +
Sbjct: 66 YEVLSTKIEICLAKADIITWASLEHGK 92

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi} Length = 131

 Score = 45.2 bits (107), Expect = 4e-07
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 18/121 (14%)

Query: 9   WAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKC 65
           W Q  +++ +   +     +  I ++   + I     V  QGE+     EL  +      
Sbjct: 9   WDQELNEINIQFPVTGDADSSAIKIRMVGKKI----CVKNQGEIV-IDGELLHEVDVSSL 63

Query: 66  KTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLASNDDD 125
              +    +  +V K+   WW  LL   E       VD  K  +      ++D++  D +
Sbjct: 64  WWVINGDVVDVNVTKKRNEWWDSLLVGSE------SVDVQKLAENK----HADMSMLDAE 113

Query: 126 A 126
           A
Sbjct: 114 A 114

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 127

 Score = 44.7 bits (105), Expect = 6e-07
 Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 9   WAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLE-LFGKTLP 62
           W Q    V + I+L        +++ V    +  F      + G+ +   +  L      
Sbjct: 25  WDQSDKFVKIYITLTGVHQVPTENVQVHFTERS-FDLLVKNLNGKSYSMIVNNLLKPISV 83

Query: 63  EKCKTKVGLRNIICSVQKEEKG-WWKRLLKSEEK 95
           E    KV    ++   +K+ +   W  L + E++
Sbjct: 84  EGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKE 117

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus} Length = 157

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 9   WAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKC 65
           W Q  ++V++ + +P    A+DI    + + +     + V G       +LF  T+ ++ 
Sbjct: 18  WYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVA----LAVGGREI-LKGKLFDSTIADEG 72

Query: 66  ----KTKVGLRNIICSVQKEEKGWWKRLLKSEEKPAPYI 100
               + +  +R ++   +++    W  LL+SE    P++
Sbjct: 73  TWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWV 111

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4 Length = 124

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 9   WAQRSDKVYLTISLPD----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEK 64
           W+Q    + + + +P      K +SV      I   + +   GE      +L  K   E 
Sbjct: 24  WSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIR-VAMLEENGERVLMEGKLTHKINTES 82

Query: 65  CK-TKVGLRNIICSVQKEEKGWWKRLLKSEEK 95
              +    + ++ ++ K  + WW  +L+ EE 
Sbjct: 83  SLWSLEPGKCVLVNLSKVGEYWWNAILEGEEP 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	100.0
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	100.0
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	100.0
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	99.91
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	99.9
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	99.89
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	99.88
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	99.88
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	99.87
1wfi_A	131	Nuclear distribution gene C homolog; NUDC, riken s	99.84
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	99.81
3qor_A	121	Nuclear migration protein NUDC; beta-sandwich, cha	99.81
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	98.42
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	98.42
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	98.36
4fei_A	102	Heat shock protein-related protein; stress respons	98.24
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	98.07
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	97.88
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	97.8
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	97.43
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	97.36
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	97.25
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	97.08
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	96.67
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	96.63
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	90.98

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}

Probab=100.00  E-value=1.3e-44  Score=272.88  Aligned_cols=146  Identities=71%  Similarity=1.213  Sum_probs=127.5

Q ss_pred             CCCCCCeEEEecCCEEEEEEEcCCCCCceEEEe-cccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEE
Q 031955            1 MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCE-PQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQ   79 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~-~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~   79 (150)
                      |++||+|.||||.+.|+|||+++++++++|+|+ ++ +|+|++.+.+++.|.++|+||++|+|+ |+|++.+++|+|+|+
T Consensus         1 m~~~P~~~W~Qt~~~V~ltI~l~~~~~v~V~~~~~~-~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~   78 (150)
T 2kmw_A            1 SSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQG-LFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQ   78 (150)
T ss_dssp             CEECCCEEEEECSSEEEEEECCSSEEEEEECCCTTE-EEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEE
T ss_pred             CCcCCcEEEEeCCCEEEEEEEeCCCCceEEEEecCC-EEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEE
Confidence            899999999999999999999999999999999 56 889999865678999999999999999 999999999999999


Q ss_pred             ecCCCcccceecccccCCCcceecCCccccCcccCCCCCCCCCCCcccccCCCCCCCCCccCcCCCCccCC
Q 031955           80 KEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLASNDDDAEHVGQNDESSDDEGMLYLPDLEKL  150 (150)
Q Consensus        80 K~~~~~W~rL~k~~~K~~~~lk~Dwdkw~deddee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (150)
                      |+++++||||++++.|+++|+++||+||+||++++++... ++ +..++++.++.++||++|+|+|||+++
T Consensus        79 K~e~~~W~rL~k~~~K~~~~lk~Dwdkw~dedeeee~~~~-~~-~~~~~~~~d~~~~~d~~~~~~p~l~~~  147 (150)
T 2kmw_A           79 KEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETA-SD-DESAFVNQDSESSDDDGLLYLPDLEKA  147 (150)
T ss_dssp             ECCSSCCSCSBSCCSSCCTTEEECSSSSCCSSCCCCSSCC-CC-CCCCCCCCCCCCCCCCCCCCCCCSCCC
T ss_pred             ECCCCcCcccccCCcccCccccccchhcCCchhccccccc-Cc-ccccccccccccccccCCccCCCHHHh
Confidence            9998999999999888445999999999999776654442 22 233555566777788999999999985

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2

Probab=100.00  E-value=5.2e-35  Score=213.75  Aligned_cols=109  Identities=32%  Similarity=0.590  Sum_probs=98.7

Q ss_pred             CC-CeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEec-CCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HP-EVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG-VQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P-~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~-~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      || +|.||||.+.|+|||+++++++++|+|+++ +|+|++.+ .+|++|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus         2 ~P~~~~W~Qt~~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~   80 (125)
T 1ejf_A            2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKS-KLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKG   80 (125)
T ss_dssp             BCCCEEEEECSSEEEEEECCTTEEEEEEEEETT-EEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEES
T ss_pred             CCCceeEEeCCCEEEEEEEecCCCceEEEEECC-EEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEEC
Confidence            56 999999999999999999999999999999 88999875 4678899999999999999999999999999999999


Q ss_pred             CCC-cccceecccccCCCcceecCCccccCcccC
Q 031955           82 EKG-WWKRLLKSEEKPAPYIKVDWNKWCDEDDEG  114 (150)
Q Consensus        82 ~~~-~W~rL~k~~~K~~~~lk~Dwdkw~deddee  114 (150)
                      +++ +|+||++++.|++ |+++||+||+||+|++
T Consensus        81 ~~~~~W~rL~~~~~K~~-~lk~D~dkw~de~dd~  113 (125)
T 1ejf_A           81 ESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDS  113 (125)
T ss_dssp             STTCCCSSSBSSCCCCT-TEEECTTTCCCCC---
T ss_pred             CCCCCCCceecCCCccc-cccCChHHhCCccccc
Confidence            875 9999999988864 9999999999974443

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-35  Score=218.34  Aligned_cols=114  Identities=29%  Similarity=0.550  Sum_probs=94.7

Q ss_pred             CCCCCCeEEEecCCE-------EEEEEEcCCCCCceEEEecccEEEEEEecCC------CceEEEEEeccccccCCCceE
Q 031955            1 MSRHPEVLWAQRSDK-------VYLTISLPDAKDISVKCEPQGIFGFSAVGVQ------GELFDFSLELFGKTLPEKCKT   67 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~-------V~ltV~l~d~kd~~V~~~~~~~l~f~~~~~~------~~~y~~~leLf~~I~pe~S~~   67 (150)
                      |+++|+|.||||.+.       |+|||+++++++++|+|+++ +|+|++.+..      ++.|.++|+||++|+|++|+|
T Consensus         3 ~~~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~   81 (134)
T 2cg9_X            3 KVINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPS-YIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH   81 (134)
T ss_dssp             --------CBCCCEEECCCSSEEEEECCCSSEESCCCCBCSS-EEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred             cccCCCEEEEeCCCCcCCcCCEEEEEEEecCCCceEEEEECC-EEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence            578999999999987       99999999999999999999 8899987532      378999999999999999999


Q ss_pred             EecCCe-EEEEEEecCC--CcccceecccccCCCcceecCCccccCcccCCC
Q 031955           68 KVGLRN-IICSVQKEEK--GWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSN  116 (150)
Q Consensus        68 ~i~~~k-I~i~L~K~~~--~~W~rL~k~~~K~~~~lk~Dwdkw~deddee~~  116 (150)
                      ++.+++ |+|+|+|+++  .+||||++++.|++ |+++||+||+||||++++
T Consensus        82 ~v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~-~lk~D~dkw~dEde~e~~  132 (134)
T 2cg9_X           82 KVANGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKWVDADEQDEV  132 (134)
T ss_dssp             EECCC--CEEEEEECSSSSCCCSCSSSSCCCCS-SEEECTTTCCCSSSSSCC
T ss_pred             EECCCEEEEEEEEECCCCCCCCCceecCCCccC-cccCCchhcCCccccccc
Confidence            999999 9999999983  59999999988865 999999999999776553

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=99.91  E-value=2.7e-24  Score=147.62  Aligned_cols=88  Identities=20%  Similarity=0.314  Sum_probs=81.3

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      .|+|.|+||.+.|+|+|+++++  +++.|+|+++ +|+|++.+.+++.|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus         2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~   80 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA   80 (92)
T ss_dssp             CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred             CccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence            5899999999999999999995  6899999998 789998765567899999999999999999999999999999999


Q ss_pred             CCCcccceecc
Q 031955           82 EKGWWKRLLKS   92 (150)
Q Consensus        82 ~~~~W~rL~k~   92 (150)
                      ++++|+||+++
T Consensus        81 ~~~~W~~L~~~   91 (92)
T 2xcm_C           81 DIITWASLEHG   91 (92)
T ss_dssp             SSCCCSCSBTT
T ss_pred             CCCcchhcccC
Confidence            98999999975

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=99.90  E-value=1.1e-23  Score=150.44  Aligned_cols=94  Identities=22%  Similarity=0.347  Sum_probs=81.2

Q ss_pred             CCCC--CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEE
Q 031955            1 MSRH--PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIIC   76 (150)
Q Consensus         1 Ms~~--P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i   76 (150)
                      |+++  |+|.|+||.+.|+|+|+++++  +++.|+|+++ +|+|++...+++.|.++++||++|+|++|+|++.+++|+|
T Consensus         4 m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i   82 (114)
T 1rl1_A            4 MTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEI   82 (114)
T ss_dssp             ----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEE
T ss_pred             CCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEE
Confidence            7766  569999999999999999987  4899999998 7899987545788999999999999999999999999999


Q ss_pred             EEEecCCCcccceeccccc
Q 031955           77 SVQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        77 ~L~K~~~~~W~rL~k~~~K   95 (150)
                      +|+|+++++|+||++++.+
T Consensus        83 ~L~K~~~~~W~~L~~~~~~  101 (114)
T 1rl1_A           83 KLKKPEAVRWEKLEGQGDV  101 (114)
T ss_dssp             EEECSSCCCCSSSBTTC--
T ss_pred             EEEcCCCCcCccccccCCc
Confidence            9999998999999998766

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.89  E-value=9.3e-23  Score=148.93  Aligned_cols=90  Identities=18%  Similarity=0.318  Sum_probs=82.2

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC-----CCceEEEecccEEEEEEecCCCceEEEEEe-ccccccCCCceEEecCCeEEEE
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA-----KDISVKCEPQGIFGFSAVGVQGELFDFSLE-LFGKTLPEKCKTKVGLRNIICS   77 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~-----kd~~V~~~~~~~l~f~~~~~~~~~y~~~le-Lf~~I~pe~S~~~i~~~kI~i~   77 (150)
                      .++|.|+||.+.|+|+|+++++     +++.|+|+++ +|.|++.+..+++|.++++ ||++|+|++|+|++.+++|+|+
T Consensus        20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~   98 (127)
T 1x5m_A           20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLIL   98 (127)
T ss_dssp             CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEE
T ss_pred             ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEE
Confidence            3699999999999999999987     6899999999 8899987656789999996 9999999999999999999999


Q ss_pred             EEecCCC-cccceecccc
Q 031955           78 VQKEEKG-WWKRLLKSEE   94 (150)
Q Consensus        78 L~K~~~~-~W~rL~k~~~   94 (150)
                      |+|++++ +|+||++.+.
T Consensus        99 L~K~~~~~~W~~L~~~~~  116 (127)
T 1x5m_A           99 CRKKVENTRWDYLTQVEK  116 (127)
T ss_dssp             EECSSSSCCCSSSBHHHH
T ss_pred             EEECCCCCCCCccccccc
Confidence            9999987 9999997654

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}

Probab=99.88  E-value=1.4e-22  Score=148.75  Aligned_cols=90  Identities=18%  Similarity=0.310  Sum_probs=75.4

Q ss_pred             CCCCCCeEEEecCCEEEEEEEcC---CCCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEE
Q 031955            1 MSRHPEVLWAQRSDKVYLTISLP---DAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICS   77 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~V~ltV~l~---d~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~   77 (150)
                      |+.+|+|.|+||.+.|+|+|.|+   .++++.|+|+++ +|.|++.   |.+ .++++||++|+|++|+|++.+++|+|+
T Consensus         1 m~~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~   75 (131)
T 2o30_A            1 MPSEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVN   75 (131)
T ss_dssp             ----CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEE
T ss_pred             CCCCCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEE
Confidence            89999999999999999999997   468999999999 8898874   456 799999999999999999999999999


Q ss_pred             EEecCCCcccceeccccc
Q 031955           78 VQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        78 L~K~~~~~W~rL~k~~~K   95 (150)
                      |+|+...||+||++++.+
T Consensus        76 L~K~~~~~W~~L~~~~~~   93 (131)
T 2o30_A           76 VTKKRNEWWDSLLVGSES   93 (131)
T ss_dssp             EEESSCCCCSCSBC----
T ss_pred             EEECCCCCCccccCCCCC
Confidence            999966699999997654

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4

Probab=99.88  E-value=2.3e-22  Score=146.32  Aligned_cols=92  Identities=18%  Similarity=0.318  Sum_probs=82.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcC----CCCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCe-EEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLP----DAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRN-IICS   77 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~----d~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~k-I~i~   77 (150)
                      .+|+|.|+||.+.|+|+|.|+    .+++++|+|+++ +|.|++.+..+.+|.++++||++|+|++|+|++.+++ |+|+
T Consensus        18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~   96 (124)
T 1wgv_A           18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVN   96 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred             cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEE
Confidence            579999999999999999999    457999999999 8899987545667889999999999999999999876 9999


Q ss_pred             EEecCCCcccceeccccc
Q 031955           78 VQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        78 L~K~~~~~W~rL~k~~~K   95 (150)
                      |+|++..||+||++++.+
T Consensus        97 L~K~~~~~W~~L~~~~~~  114 (124)
T 1wgv_A           97 LSKVGEYWWNAILEGEEP  114 (124)
T ss_dssp             ECBSSSCCCSCSBTTSCC
T ss_pred             EEECCCCCCcCcccCCCc
Confidence            999988899999987755

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=99.87  E-value=5.9e-22  Score=146.55  Aligned_cols=89  Identities=17%  Similarity=0.206  Sum_probs=80.6

Q ss_pred             CCCeEEEec-CCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCc------------eEEEEEeccccccCCCceEE
Q 031955            4 HPEVLWAQR-SDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGE------------LFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         4 ~P~v~WaQ~-~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~------------~y~~~leLf~~I~pe~S~~~   68 (150)
                      .|+|.|||| .+.|+|+|+++++  ++++|+|+++ +|+|++...++.            .|.++++||++|+|++|+|+
T Consensus        19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~   97 (134)
T 1wh0_A           19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC   97 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred             CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence            589999999 9999999999987  7899999999 889998753333            79999999999999999999


Q ss_pred             ecCCeEEEEEEecCCCcccceeccc
Q 031955           69 VGLRNIICSVQKEEKGWWKRLLKSE   93 (150)
Q Consensus        69 i~~~kI~i~L~K~~~~~W~rL~k~~   93 (150)
                      +.+++|+|+|+|++..+|+||++..
T Consensus        98 v~~~kIeI~L~K~e~~~W~~L~~~~  122 (134)
T 1wh0_A           98 FTASRIDICLRKRQSQRWGGLEAPA  122 (134)
T ss_dssp             ECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred             EeCCEEEEEEEECCCCccccccccC
Confidence            9999999999999888999999743

>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4

Probab=99.84  E-value=1.2e-20  Score=138.20  Aligned_cols=98  Identities=19%  Similarity=0.298  Sum_probs=84.6

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCC-eEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLR-NIIC   76 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~-kI~i   76 (150)
                      .+|+|.|+||.+.|+|+|.+++     +++++|+|+++ +|.|++.   |..+.++++||++|+|++|+|++.++ .|+|
T Consensus         6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i   81 (131)
T 1wfi_A            6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTV   81 (131)
T ss_dssp             SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEE
Confidence            5799999999999999999995     37999999999 8888874   55567999999999999999999986 6999


Q ss_pred             EEEecCCC-cccceecccccCCCcceecCC
Q 031955           77 SVQKEEKG-WWKRLLKSEEKPAPYIKVDWN  105 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~K~~~~lk~Dwd  105 (150)
                      +|+|++++ ||+||++++.+.. ..+++..
T Consensus        82 ~L~K~~~~~~W~~L~~~~~~id-~~ki~pe  110 (131)
T 1wfi_A           82 HLEKINKMEWWNRLVTSDPEIN-TKKINPE  110 (131)
T ss_dssp             EEEBSSSCCCCSCSBSSCCSCC-CSSSSCC
T ss_pred             EEEECCCCCCChhhhcCCCCCC-ccEecCC
Confidence            99999885 9999999877643 5666653

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}

Probab=99.81  E-value=1.3e-19  Score=136.99  Aligned_cols=89  Identities=21%  Similarity=0.372  Sum_probs=79.1

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC---CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCe-EEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRN-IICSV   78 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d---~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~k-I~i~L   78 (150)
                      .+|+|.|+||.+.|+|+|.|+.   ++++.|+|+++ +|+|+++   |.. .++++||++|+|++|+|++.+++ |+|+|
T Consensus        12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L   86 (157)
T 2rh0_A           12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVL   86 (157)
T ss_dssp             ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEE
Confidence            4699999999999999999985   58999999999 8899875   445 49999999999999999999877 99999


Q ss_pred             EecCC---CcccceecccccC
Q 031955           79 QKEEK---GWWKRLLKSEEKP   96 (150)
Q Consensus        79 ~K~~~---~~W~rL~k~~~K~   96 (150)
                      +|++.   .||+||++++.+.
T Consensus        87 ~K~~~~~~~~W~~L~k~~~~l  107 (157)
T 2rh0_A           87 TKTKRDAANCWTSLLESEYAA  107 (157)
T ss_dssp             EBSSCSTTCCCSEEETTEEEC
T ss_pred             EEcCCCcCCcChhhhcCCCCC
Confidence            99986   5999999987664

>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A

Probab=99.81  E-value=1.9e-19  Score=130.53  Aligned_cols=89  Identities=20%  Similarity=0.337  Sum_probs=78.7

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIIC   76 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i   76 (150)
                      .+|+|.|+||.+.|+|+|.++.     ++++.|+|+++ +|.|.++   |.+|.++++||++|+|++|+|++.+ +.|+|
T Consensus        15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i   90 (121)
T 3qor_A           15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTV   90 (121)
T ss_dssp             BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEE
T ss_pred             cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEE
Confidence            4689999999999999999984     47899999999 8888774   4567899999999999999999997 58999


Q ss_pred             EEEecCCC-cccceeccccc
Q 031955           77 SVQKEEKG-WWKRLLKSEEK   95 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~K   95 (150)
                      +|.|++.+ ||+||++++.+
T Consensus        91 ~L~K~~~~~~W~~L~~~~~~  110 (121)
T 3qor_A           91 HLEKINKMEWWSRLVSSDPE  110 (121)
T ss_dssp             EEEBSSSSCCCSCSBTTSCC
T ss_pred             EEEECCCCCCChhhhcCCCC
Confidence            99999875 99999997754

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=98.42  E-value=5.3e-06  Score=59.33  Aligned_cols=81  Identities=14%  Similarity=0.249  Sum_probs=68.5

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCCC----CceEEEecccEEEEEEecCCCceEEEEEeccccccCC-C--ceEEecCCeEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDAK----DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPE-K--CKTKVGLRNII   75 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~k----d~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe-~--S~~~i~~~kI~   75 (150)
                      ++|++.=.|.++.|+|+|.++.++    ++.+.+..+ .|.|.+     ++|.|.|.|-++|.-+ .  ++|......+.
T Consensus        16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~-----~PYyLRL~lP~~vved~~~~A~YD~d~g~~~   89 (115)
T 3eud_A           16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECIN   89 (115)
T ss_dssp             BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEE-----TTEEEEEECSSCEECSTTCEEEEETTTTEEE
T ss_pred             eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEec-----CCeEEEEecCcceecCCCcceEEeCCCcEEE
Confidence            589999999999999999999754    788999888 888887     4699999999999553 3  36777789999


Q ss_pred             EEEEecCCC-cccce
Q 031955           76 CSVQKEEKG-WWKRL   89 (150)
Q Consensus        76 i~L~K~~~~-~W~rL   89 (150)
                      |+|.|+.+| ..+-|
T Consensus        90 v~lpK~~~GE~F~dL  104 (115)
T 3eud_A           90 VKVAKLNKNEYFEDL  104 (115)
T ss_dssp             EEEEESSTTCCCCCT
T ss_pred             EEEcCCcCCCcCCCc
Confidence            999999987 66655

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=98.42  E-value=6.9e-07  Score=65.67  Aligned_cols=82  Identities=15%  Similarity=0.204  Sum_probs=68.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCCC----CceEEEecccEEEEEEecCCCceEEEEEeccccc-cCCCc--eEEecCCeEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDAK----DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT-LPEKC--KTKVGLRNII   75 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~k----d~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I-~pe~S--~~~i~~~kI~   75 (150)
                      ++|++.=.|+.+.|+|.|.++.++    ++.+.+..+ .|.|.+     .+|.|.|.|-++| .++.+  +|......+.
T Consensus         2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~-----~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~   75 (134)
T 2k8q_A            2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECIN   75 (134)
T ss_dssp             CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECS-----SSSCEEECCSSCEECCSSCEEEEETTTTEEE
T ss_pred             cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEec-----CCeEEEecCCCeeecCCCcceeEeccCCEEE
Confidence            589999999999999999999876    888888887 667765     5799999999999 66655  4555678999


Q ss_pred             EEEEecCCC-ccccee
Q 031955           76 CSVQKEEKG-WWKRLL   90 (150)
Q Consensus        76 i~L~K~~~~-~W~rL~   90 (150)
                      |+|.|+.+| +++-|-
T Consensus        76 VtLpK~~~Ge~F~dLD   91 (134)
T 2k8q_A           76 VKVAKLNKNEYFEDLD   91 (134)
T ss_dssp             EEEEESSTTCCCSSTT
T ss_pred             EEEeCCCCCCCCCCcc
Confidence            999999988 888764

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=98.36  E-value=1.1e-05  Score=55.21  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=66.8

Q ss_pred             CCCCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C----------ceEEEEEeccccccCCC
Q 031955            2 SRHPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G----------ELFDFSLELFGKTLPEK   64 (150)
Q Consensus         2 s~~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~----------~~y~~~leLf~~I~pe~   64 (150)
                      +..|.+.++++.+.+.|++.||++  +++.|.++.+ .|++++....     +          ..|.-.+.|-..|+++.
T Consensus         2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~   80 (100)
T 3gla_A            2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG   80 (100)
T ss_dssp             CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred             CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence            357999999999999999999987  5788999877 8899876311     1          14777888999999999


Q ss_pred             ceEEecCCeEEEEEEecCC
Q 031955           65 CKTKVGLRNIICSVQKEEK   83 (150)
Q Consensus        65 S~~~i~~~kI~i~L~K~~~   83 (150)
                      .+.++.++.+.|+|.|...
T Consensus        81 i~A~~~~GvL~I~~pK~~~   99 (100)
T 3gla_A           81 ITAAGRNGVLEIRIPKRPA   99 (100)
T ss_dssp             CEEEEETTEEEEEEEBC--
T ss_pred             eEEEEeCCEEEEEEecCCC
Confidence            9999999999999999754

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=98.24  E-value=3.4e-05  Score=53.27  Aligned_cols=80  Identities=11%  Similarity=0.119  Sum_probs=67.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-------C---ceEEEEEeccccccCCCceEEec
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-------G---ELFDFSLELFGKTLPEKCKTKVG   70 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-------~---~~y~~~leLf~~I~pe~S~~~i~   70 (150)
                      ..|.+.++++.+.+.|++.||++  +++.|.++.+ .|++++....       .   ..|.-.+.|-..|+++..+.++.
T Consensus         5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~   83 (102)
T 4fei_A            5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLA   83 (102)
T ss_dssp             CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEE
T ss_pred             ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEE
Confidence            57999999999999999999987  5788998877 8888876311       1   15777888999999999999999


Q ss_pred             CCeEEEEEEecCC
Q 031955           71 LRNIICSVQKEEK   83 (150)
Q Consensus        71 ~~kI~i~L~K~~~   83 (150)
                      ++-+.|+|.|..+
T Consensus        84 ~GvL~I~lpK~~~   96 (102)
T 4fei_A           84 GGVLTVRFEKLRP   96 (102)
T ss_dssp             TTEEEEEEEBSSC
T ss_pred             CCEEEEEEEccCc
Confidence            9999999999865

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=98.07  E-value=7.7e-05  Score=53.08  Aligned_cols=79  Identities=10%  Similarity=-0.004  Sum_probs=66.6

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEec-ccEEEEEEecCC---Cc--------eEEEEEeccccccCCCc-eEE
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEP-QGIFGFSAVGVQ---GE--------LFDFSLELFGKTLPEKC-KTK   68 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~-~~~l~f~~~~~~---~~--------~y~~~leLf~~I~pe~S-~~~   68 (150)
                      .|.+.++++.+.+.|++.||++  +++.|.++. + .|++++....   ++        .|.-.+.|-..|+++.. +.+
T Consensus        24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~  102 (123)
T 3aab_A           24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGK  102 (123)
T ss_dssp             CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEE
T ss_pred             CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeE
Confidence            4899999999999999999997  578899988 6 8899987321   11        57777889999999998 888


Q ss_pred             ecCCeEEEEEEecCC
Q 031955           69 VGLRNIICSVQKEEK   83 (150)
Q Consensus        69 i~~~kI~i~L~K~~~   83 (150)
                      ..++-+.|+|.|...
T Consensus       103 ~~~GvL~I~lPK~~~  117 (123)
T 3aab_A          103 YENGVLTIRIPIAGT  117 (123)
T ss_dssp             EETTEEEEEEEGGGE
T ss_pred             EcCCEEEEEEEcCCC
Confidence            999999999999764

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=97.88  E-value=0.0002  Score=52.86  Aligned_cols=80  Identities=16%  Similarity=0.262  Sum_probs=65.1

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C----------ceEEEEEeccccccCCCce
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G----------ELFDFSLELFGKTLPEKCK   66 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~----------~~y~~~leLf~~I~pe~S~   66 (150)
                      .|.+.++++.+.+.|++.||++  ++++|.++..+.|++++....     +          ..|.-.+.|-..|+++..+
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~  122 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK  122 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence            5899999999999999999997  467787754338899886311     1          2467788899999999888


Q ss_pred             EEecCCeEEEEEEecCC
Q 031955           67 TKVGLRNIICSVQKEEK   83 (150)
Q Consensus        67 ~~i~~~kI~i~L~K~~~   83 (150)
                      .++.++.+.|+|.|...
T Consensus       123 A~~~nGvL~I~lPK~~~  139 (151)
T 1gme_A          123 AGLENGVLTVTVPKAEV  139 (151)
T ss_dssp             EEEETTEEEEEEECCCC
T ss_pred             EEEECCEEEEEEEccCc
Confidence            88999999999999764

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=97.80  E-value=0.00045  Score=51.29  Aligned_cols=76  Identities=14%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             eEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C-----------ceEEEEEeccccccCCCceEE
Q 031955            7 VLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G-----------ELFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~-----------~~y~~~leLf~~I~pe~S~~~   68 (150)
                      +.++++.+.+.|++.|+++  ++++|.++.+ .|++++....     +           ..|.-.+.|-..|+++..+.+
T Consensus        59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~  137 (161)
T 4eld_A           59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK  137 (161)
T ss_dssp             EEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEE
T ss_pred             eeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEE
Confidence            9999999999999999997  5788888877 8899886421     1           256677889999999998888


Q ss_pred             ecCCeEEEEEEecCC
Q 031955           69 VGLRNIICSVQKEEK   83 (150)
Q Consensus        69 i~~~kI~i~L~K~~~   83 (150)
                      +.++.++|+|.|...
T Consensus       138 ~~nGvL~I~lpK~~~  152 (161)
T 4eld_A          138 FENGVLSVILPKAES  152 (161)
T ss_dssp             EETTEEEEEEEBCGG
T ss_pred             EECCEEEEEEEcCCC
Confidence            999999999999764

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=97.43  E-value=0.00074  Score=46.51  Aligned_cols=77  Identities=12%  Similarity=0.035  Sum_probs=63.2

Q ss_pred             CeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C---ceEEEEEeccccccCCCceEEe-cCCeE
Q 031955            6 EVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G---ELFDFSLELFGKTLPEKCKTKV-GLRNI   74 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~---~~y~~~leLf~~I~pe~S~~~i-~~~kI   74 (150)
                      .+.++++.+.+.|++.||++  ++++|.+..+ .|++++....     +   ++|.-.+.|-..|+++..+.++ .++.+
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL   81 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL   81 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence            46788999999999999997  5788888876 8899886311     1   3477788899999999999999 68999


Q ss_pred             EEEEEecCC
Q 031955           75 ICSVQKEEK   83 (150)
Q Consensus        75 ~i~L~K~~~   83 (150)
                      .|+|.|...
T Consensus        82 ~I~lPK~~~   90 (101)
T 2wj5_A           82 SIQATPASA   90 (101)
T ss_dssp             EEEECBCCC
T ss_pred             EEEEECCCc
Confidence            999998754

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=97.36  E-value=0.0038  Score=43.29  Aligned_cols=78  Identities=12%  Similarity=0.033  Sum_probs=64.4

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC-----ceEEEEEeccccccCCCceEEe-cCCe
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG-----ELFDFSLELFGKTLPEKCKTKV-GLRN   73 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~-----~~y~~~leLf~~I~pe~S~~~i-~~~k   73 (150)
                      .-...+++.+.+.|++.||+.  ++++|.+..+ .|++++...   ..     ++|.-.+.|-..|+++.-+.++ .++.
T Consensus         3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv   81 (106)
T 3l1e_A            3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM   81 (106)
T ss_dssp             CSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred             CceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence            346789999999999999997  5788888877 889988521   11     3577778899999999999999 6899


Q ss_pred             EEEEEEecCC
Q 031955           74 IICSVQKEEK   83 (150)
Q Consensus        74 I~i~L~K~~~   83 (150)
                      +.|+|.|..+
T Consensus        82 L~I~~PK~~~   91 (106)
T 3l1e_A           82 LTFSGPKIPS   91 (106)
T ss_dssp             EEEEEEBCCC
T ss_pred             EEEEEEccCc
Confidence            9999999865

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=97.25  E-value=0.005  Score=40.93  Aligned_cols=70  Identities=9%  Similarity=0.164  Sum_probs=58.2

Q ss_pred             ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----C---CceEEEEEeccccccCCCceEEec-CCeEEEEEE
Q 031955           11 QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----Q---GELFDFSLELFGKTLPEKCKTKVG-LRNIICSVQ   79 (150)
Q Consensus        11 Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~---~~~y~~~leLf~~I~pe~S~~~i~-~~kI~i~L~   79 (150)
                      ++.+.+.|++.||+.  ++++|.+..+ .|++++...     .   ...|.-.+.|-..|+++.-+.++. ++.+.|+|.
T Consensus         4 E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP   82 (85)
T 3q9p_A            4 HTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP   82 (85)
T ss_dssp             CCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred             CcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence            678899999999986  5788888877 889988631     1   146888889999999999999998 899999999


Q ss_pred             ec
Q 031955           80 KE   81 (150)
Q Consensus        80 K~   81 (150)
                      |.
T Consensus        83 K~   84 (85)
T 3q9p_A           83 MP   84 (85)
T ss_dssp             CC
T ss_pred             cC
Confidence            85

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=97.08  E-value=0.0028  Score=42.53  Aligned_cols=72  Identities=7%  Similarity=0.099  Sum_probs=54.9

Q ss_pred             ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC-----ceEEEEEeccccccCCCceEEe-cCCeEEEEEE
Q 031955           11 QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG-----ELFDFSLELFGKTLPEKCKTKV-GLRNIICSVQ   79 (150)
Q Consensus        11 Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L~   79 (150)
                      ++.+.+.|++.||++  +++.|.+..+ .|++++...   .+     ++|.-.+.|-..|+++..+.++ .++.+.|+|.
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p   81 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP   81 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence            467789999999997  5788888876 888888631   11     3577788899999999989999 7899999999


Q ss_pred             ecCC
Q 031955           80 KEEK   83 (150)
Q Consensus        80 K~~~   83 (150)
                      |...
T Consensus        82 K~~~   85 (90)
T 2y1y_A           82 RKQV   85 (90)
T ss_dssp             BC--
T ss_pred             cCCC
Confidence            8753

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=96.67  E-value=0.0073  Score=45.67  Aligned_cols=76  Identities=7%  Similarity=0.072  Sum_probs=58.9

Q ss_pred             eEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---C-----ceEEEEEeccccccCCCceEEe-cCCeEE
Q 031955            7 VLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---G-----ELFDFSLELFGKTLPEKCKTKV-GLRNII   75 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~   75 (150)
                      +.++++.+.+.|++.|++.  ++++|++..+ .|++++....   +     ++|.-.+.|-..|+++..+.++ .++.+.
T Consensus        66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~  144 (175)
T 2klr_A           66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLT  144 (175)
T ss_dssp             ---CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEE
T ss_pred             eEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEE
Confidence            5778889999999999997  5788888876 8888886311   1     3477778899999999999999 689999


Q ss_pred             EEEEecCC
Q 031955           76 CSVQKEEK   83 (150)
Q Consensus        76 i~L~K~~~   83 (150)
                      |+|.|+..
T Consensus       145 I~lPK~~~  152 (175)
T 2klr_A          145 VNGPRKQV  152 (175)
T ss_dssp             EEEECC--
T ss_pred             EEEECCCC
Confidence            99999754

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=96.63  E-value=0.012  Score=48.49  Aligned_cols=80  Identities=9%  Similarity=0.003  Sum_probs=67.1

Q ss_pred             CCCeEEEecCC----EEEEEEEcCCC--CCceEEEecccEEEEEEecCC----C---ceEEEEEeccccccCCCceEEec
Q 031955            4 HPEVLWAQRSD----KVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ----G---ELFDFSLELFGKTLPEKCKTKVG   70 (150)
Q Consensus         4 ~P~v~WaQ~~~----~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~----~---~~y~~~leLf~~I~pe~S~~~i~   70 (150)
                      .|.+..+.+.+    .+.|++.||+.  ++++|+++.+ .|++++....    +   ..|.-.+.|-..|+++..+.++.
T Consensus        98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~  176 (314)
T 2bol_A           98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATIT  176 (314)
T ss_dssp             GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred             CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence            37788899999    99999999986  6888998877 8899886311    1   36888899999999999999999


Q ss_pred             -CCeEEEEEEecCCC
Q 031955           71 -LRNIICSVQKEEKG   84 (150)
Q Consensus        71 -~~kI~i~L~K~~~~   84 (150)
                       ++.+.|+|.|..+.
T Consensus       177 ~nGVL~I~lPK~~~~  191 (314)
T 2bol_A          177 TDDVLVIEAPVNEPN  191 (314)
T ss_dssp             SSSEEEEEEEBSSCC
T ss_pred             CCCEEEEEEeccCcc
Confidence             89999999998754

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=90.98  E-value=1.2  Score=36.30  Aligned_cols=68  Identities=15%  Similarity=0.065  Sum_probs=53.4

Q ss_pred             CCEEEEEEEc-CCC--CCceEEEecccEEEEEEecCC---C--------ceEEEEEeccccccCCCceEEecCCeEEEEE
Q 031955           13 SDKVYLTISL-PDA--KDISVKCEPQGIFGFSAVGVQ---G--------ELFDFSLELFGKTLPEKCKTKVGLRNIICSV   78 (150)
Q Consensus        13 ~~~V~ltV~l-~d~--kd~~V~~~~~~~l~f~~~~~~---~--------~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L   78 (150)
                      .+.+.|.+.| |+.  +++.|+++.+ .|++++....   +        ..|.=.+.|-..|+++.-+.++.++.+.|+|
T Consensus       232 ~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~  310 (314)
T 2bol_A          232 SKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA  310 (314)
T ss_dssp             CEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence            3478899999 886  5788888777 8899887311   0        1366677899999999988888999999999


Q ss_pred             Eec
Q 031955           79 QKE   81 (150)
Q Consensus        79 ~K~   81 (150)
                      .|.
T Consensus       311 Pk~  313 (314)
T 2bol_A          311 PLF  313 (314)
T ss_dssp             EEE
T ss_pred             ecC
Confidence            874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	150
d1ejfa_	110	b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapien	5e-27
d1rl1a_	92	b.15.1.3 (A:) Suppressor of G2 allele of skp1 homo	1e-16
d1wh0a_	134	b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolas	7e-11
d1wgva_	124	b.15.1.4 (A:) NudC domain containing protein 3, NU	3e-09
d1wfia_	131	b.15.1.4 (A:) Nuclear migration protein nudC {Mous	3e-06

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 5e-27
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)

Query: 3   RHPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLP 62
           +     W  R D V++   + D+KD++V  E   +      G         ++LF    P
Sbjct: 2   QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61

Query: 63  EKCKTKVGLRNIICSVQKEEKG-WWKRLLKSEEKPAPYIKVDWNKWCDED 111
              K K   R+I+C ++K E G  W RL K   K   ++ VD+N W D +
Sbjct: 62  NDSKHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWE 110

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (167), Expect = 1e-16
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 9  WAQRSDKVYLTISLPDAKDISVKCEPQGI-FGFSAVGVQGELFDFSLELFGKTLPEKCKT 67
          W Q   +V +T+ + + +   V  E              GE ++  LEL    +PE+   
Sbjct: 7  WYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTF 66

Query: 68 KVGLRNIICSVQKEEKGWWKRLLKS 92
          KV    I   ++K E   W++L   
Sbjct: 67 KVLSTKIEIKLKKPEAVRWEKLEGQ 91

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]} Length = 134

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 7e-11
 Identities = 13/102 (12%), Positives = 26/102 (25%), Gaps = 13/102 (12%)

Query: 9   WAQRSDKVYLTISLP--DAKDISVKCEPQGI-----------FGFSAVGVQGELFDFSLE 55
           + +  D V + + +         V    Q                         F + ++
Sbjct: 25  YEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVK 84

Query: 56  LFGKTLPEKCKTKVGLRNIICSVQKEEKGWWKRLLKSEEKPA 97
           L     PE+C        I   ++K +   W  L     +  
Sbjct: 85  LRNLIEPEQCTFCFTASRIDICLRKRQSQRWGGLEAPAARVG 126

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 3e-09
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 9   WAQRSDKVYLTISLPD----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEK 64
           W+Q    + + + +P      K +SV      I   + +   GE      +L  K   E 
Sbjct: 24  WSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIR-VAMLEENGERVLMEGKLTHKINTES 82

Query: 65  CKTKV-GLRNIICSVQKEEKGWWKRLLKSEEK 95
               +   + ++ ++ K  + WW  +L+ EE 
Sbjct: 83  SLWSLEPGKCVLVNLSKVGEYWWNAILEGEEP 114

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]} Length = 131

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.8 bits (98), Expect = 3e-06
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 9   WAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPE 63
           W Q   ++ L +          KD+ V  + + +     VG++G+      EL+ +   E
Sbjct: 12  WTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLR----VGLKGQPPVVDGELYNEVKVE 67

Query: 64  KCKTKV--GLRNIICSVQKEEKGWWKRLLKSEEKPAP 98
           +    +  G    +   +  +  WW RL+ S+ +   
Sbjct: 68  ESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINT 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	150
d1ejfa_	110	Co-chaperone p23 {Human (Homo sapiens) [TaxId: 960	99.97
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	99.91
d1wh0a_	134	Ubiquitin carboxyl-terminal hydrolase 19, USP19 {H	99.79
d1wgva_	124	NudC domain containing protein 3, NUDCD3 (KIAA1068	99.78
d1wfia_	131	Nuclear migration protein nudC {Mouse (Mus musculu	99.63
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	97.81
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	97.58

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=189.83  Aligned_cols=105  Identities=31%  Similarity=0.548  Sum_probs=97.4

Q ss_pred             CCCeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEec-CCCceEEEEEeccccccCCCceEEecCCeEEEEEEecC
Q 031955            4 HPEVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG-VQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKEE   82 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~-~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~~   82 (150)
                      .|++.||||.+.|+|+|.++++++++|+|+++ .+.|++.+ ..+..|.++++||++|+|++|+|++.+++|+|+|+|++
T Consensus         3 p~~~~W~Qt~~~V~i~I~v~~~~~~~v~i~~~-~l~~~~~~~~~~~~y~l~~~L~~~I~~~~s~~~v~~~kiei~L~K~~   81 (110)
T d1ejfa_           3 PASAKWYDRRDYVFIEFCVEDSKDVNVNFEKS-KLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGE   81 (110)
T ss_dssp             CCCEEEEECSSEEEEEECCTTEEEEEEEEETT-EEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESS
T ss_pred             CCCcEEEECCCEEEEEEEeCCCCCceEEEEec-eEEEEEEecCCCceEEEEEEcccCcccCccEEEEeCCEEEEEEEEcC
Confidence            46899999999999999999999999999999 78998886 34678999999999999999999999999999999998


Q ss_pred             CC-cccceecccccCCCcceecCCccccC
Q 031955           83 KG-WWKRLLKSEEKPAPYIKVDWNKWCDE  110 (150)
Q Consensus        83 ~~-~W~rL~k~~~K~~~~lk~Dwdkw~de  110 (150)
                      ++ +|+||++++.|++ |+++|||||+|+
T Consensus        82 ~~~~W~~L~~~~~K~~-~~kvD~dkw~d~  109 (110)
T d1ejfa_          82 SGQSWPRLTKERAKLN-WLSVDFNNWKDW  109 (110)
T ss_dssp             TTCCCSSSBSSCCCCT-TEEECTTTCCCC
T ss_pred             CCCCCCceecCCCCcC-cEEccchheEcC
Confidence            76 8999999999964 999999999998

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.1e-24  Score=147.12  Aligned_cols=89  Identities=22%  Similarity=0.337  Sum_probs=81.4

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      .++|.|+||.+.|+|+|+++++  +++.|+++++ +|.|++.+.+++.|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus         2 k~ry~W~Qt~~~V~i~i~~~~~~~~~v~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~~~~~kiei~L~K~   80 (92)
T d1rl1a_           2 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP   80 (92)
T ss_dssp             CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred             CCceeEEeCCCEEEEEEEeCCCChHheEEEEecC-EEEEEEEcCCCcEEEEEEEcCcccCchhcEEEEeCCEEEEEEEEC
Confidence            4799999999999999999986  5788999888 778888766678999999999999999999999999999999999


Q ss_pred             CCCcccceeccc
Q 031955           82 EKGWWKRLLKSE   93 (150)
Q Consensus        82 ~~~~W~rL~k~~   93 (150)
                      ++++||+|++++
T Consensus        81 ~~~~W~~L~~~G   92 (92)
T d1rl1a_          81 EAVRWEKLEGQG   92 (92)
T ss_dssp             SCCCCSSSBTTC
T ss_pred             CCCcCcCcccCC
Confidence            989999999853

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-19  Score=130.04  Aligned_cols=90  Identities=16%  Similarity=0.180  Sum_probs=78.4

Q ss_pred             CCeEEEecC-CEEEEEEEcCCC--CCceEEEecccEEEEEEecCC------------CceEEEEEeccccccCCCceEEe
Q 031955            5 PEVLWAQRS-DKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ------------GELFDFSLELFGKTLPEKCKTKV   69 (150)
Q Consensus         5 P~v~WaQ~~-~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~------------~~~y~~~leLf~~I~pe~S~~~i   69 (150)
                      -+.+|||+. +.|+|+|+++++  +++.|.|+++ .|+++....+            ...|.++++||++|+|++|+|++
T Consensus        20 ir~dwyq~~~~~V~VtI~~K~v~ke~~~V~f~~~-sl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~pe~S~~~v   98 (134)
T d1wh0a_          20 VKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF   98 (134)
T ss_dssp             CCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred             cccceeecCCCEEEEEEEeCCCchhheEEEEeCC-EEEEEEECCCCcceeeccccCcCeeEEEeeecccccChhHcEEEe
Confidence            489999995 799999999986  6899999998 7777765322            35799999999999999999999


Q ss_pred             cCCeEEEEEEecCCCcccceeccccc
Q 031955           70 GLRNIICSVQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        70 ~~~kI~i~L~K~~~~~W~rL~k~~~K   95 (150)
                      .+++|+|+|+|+++++|++|++...+
T Consensus        99 ~~~kiei~L~K~~~~~W~~Le~~~~~  124 (134)
T d1wh0a_          99 TASRIDICLRKRQSQRWGGLEAPAAR  124 (134)
T ss_dssp             CSSEEEEEEEESSSCCCSCSBCCCSC
T ss_pred             CCCEEEEEEEeCCCCcCcCccccccc
Confidence            99999999999999999999976544

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.3e-18  Score=124.29  Aligned_cols=92  Identities=18%  Similarity=0.277  Sum_probs=78.2

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSV   78 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L   78 (150)
                      .+++|.|+||.+.|+|+|.|+.    ++++.|+|+++ +|.+++.+..+..|.++++||++|+|++|+|++.++++.+++
T Consensus        18 ~~~~Y~W~Qt~~~V~i~i~lp~~~~k~kdv~v~~~~~-~l~v~v~~~~~~~~~l~g~L~~~I~~deS~w~i~~~~~~i~~   96 (124)
T d1wgva_          18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVN   96 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred             CCCCeEEEeECCEEEEEEEeCCCCcchhhEEEEEEeC-EEEEEEeccCCcceEEeCcccCcccccccEEEEeCCCEEEEE
Confidence            4689999999999999999985    36899999999 889998866678899999999999999999999987766655


Q ss_pred             -EecCCCcccceeccccc
Q 031955           79 -QKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        79 -~K~~~~~W~rL~k~~~K   95 (150)
                       +|....+|++|.+++.+
T Consensus        97 lkK~~~~~W~~L~~ge~~  114 (124)
T d1wgva_          97 LSKVGEYWWNAILEGEEP  114 (124)
T ss_dssp             ECBSSSCCCSCSBTTSCC
T ss_pred             EEecCCCcChhhccCCcc
Confidence             55555699999987643

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=6.4e-16  Score=111.62  Aligned_cols=89  Identities=20%  Similarity=0.351  Sum_probs=75.4

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIIC   76 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i   76 (150)
                      ..|.|.|.|+.+.|.|+|.++.     .+++.|+|+++ +|.+.+.   +....+..+||++|+|++|+|++.+ +.+.|
T Consensus         6 ~~~~Y~W~Qt~~eV~I~V~~~~~~~~~~~di~v~i~~~-~l~v~v~---~~~~ll~g~L~~~I~~des~W~ied~~~l~i   81 (131)
T d1wfia_           6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTV   81 (131)
T ss_dssp             SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEE
T ss_pred             CCCCeEEEeeCCEEEEEEEcCCCCCcchhhEEEEeeCC-EEEEEEc---CCceeecccccCcccccccEEEEeCCCEEEE
Confidence            4699999999999999998763     37899999999 7788764   4445678899999999999999975 56899


Q ss_pred             EEEecCCC-cccceeccccc
Q 031955           77 SVQKEEKG-WWKRLLKSEEK   95 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~K   95 (150)
                      +|+|+..+ +|++|++++.+
T Consensus        82 ~L~K~~~~~~W~~l~~gd~~  101 (131)
T d1wfia_          82 HLEKINKMEWWNRLVTSDPE  101 (131)
T ss_dssp             EEEBSSSCCCCSCSBSSCCS
T ss_pred             EEEECCCCccCHHHcCCCCC
Confidence            99998875 99999997754

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=97.81  E-value=0.00014  Score=51.61  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=64.1

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----Cc----------eEEEEEeccccccCCCce
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----GE----------LFDFSLELFGKTLPEKCK   66 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~~----------~y~~~leLf~~I~pe~S~   66 (150)
                      .|++.+.++.+.+.|++.||+.  +++.|+++....+++++....     +.          .|.-.+.|-..|+++..+
T Consensus        42 ~p~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  121 (150)
T d1gmea_          42 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK  121 (150)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred             CCceeEEECCCEEEEEEEeCCCccCCEEEEEEEccceeEEEEEecccccccceeeeeeeccceEEEEEECCCCeeeceeE
Confidence            4889999999999999999997  578888875446677765311     11          355678899999999988


Q ss_pred             EEecCCeEEEEEEecCC
Q 031955           67 TKVGLRNIICSVQKEEK   83 (150)
Q Consensus        67 ~~i~~~kI~i~L~K~~~   83 (150)
                      .++.++.++|+|.|...
T Consensus       122 A~~~nGvL~I~lpK~~~  138 (150)
T d1gmea_         122 AGLENGVLTVTVPKAEV  138 (150)
T ss_dssp             EEEETTEEEEEEECCCC
T ss_pred             EEEECCEEEEEEEcCCc
Confidence            88999999999999764

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.58  E-value=0.00082  Score=45.22  Aligned_cols=78  Identities=14%  Similarity=0.117  Sum_probs=64.3

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----C-----------CceEEEEEeccccccCCCce
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----Q-----------GELFDFSLELFGKTLPEKCK   66 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~-----------~~~y~~~leLf~~I~pe~S~   66 (150)
                      |.+..+++++.+.|.+.||++  +++.|.+..+ .|.+++...     .           ...|...+.|-..|+++..+
T Consensus        11 ~pvdi~e~~~~~~i~~~lPG~~~edi~v~v~~~-~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~   89 (115)
T d1shsa_          11 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS   89 (115)
T ss_dssp             CCEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred             CceEEEEcCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEeccccccccccEEEEeeecccceEEEEecCCceeecceE
Confidence            559999999999999999997  5788888877 888887631     0           12466678888999999999


Q ss_pred             EEecCCeEEEEEEecCC
Q 031955           67 TKVGLRNIICSVQKEEK   83 (150)
Q Consensus        67 ~~i~~~kI~i~L~K~~~   83 (150)
                      .++.++.+.|+|.|...
T Consensus        90 A~~~nGvL~I~lpK~~~  106 (115)
T d1shsa_          90 AKFENGVLSVILPKAES  106 (115)
T ss_dssp             EEEETTEEEEEEEBCGG
T ss_pred             EEEECCEEEEEEEeCCC
Confidence            99999999999999754