Citrus Sinensis ID: 031969

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDERTCTGA
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHEEEEEEEEEcHHHccHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mhklsrsnrdKLQQFVSITGASEKAALQALKASdwhlegafdvfysqpqsksltdtRHLEELYNrykdpyldmILVDGITLLcndlqvdpqdIVMLVVSWHMKAATMCEFSKQEFigglqslgidsLDKFRERISFMRAELKdertctga
Flexible Loop (DISEMBL)
mhklsrsnrdklQQFVSITGASEKAALQALKASDWHLEGAFDVfysqpqsksltdtrHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMraelkdertctga
Low Complexity Region (SEG)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDERTCTGA
Disordered region (IsUnstruct)
************************AALQALKASDWHLEGAFDVFYSQ*****LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM*************
Disordered Region (DISOPRED)
************QQFVSITGASEKAALQALKASDWHLEGAFDVFY**********TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMR************
Disordered Region (DISEMBL)
**********KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAEL*********
Disordered Region (DISPRO)
*******NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS*SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELK********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDERTCTGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q96GG9	259	DCN1-like protein 1 OS=Ho	yes	no	0.953	0.552	0.446	5e-31
Q8BZJ7	259	DCN1-like protein 2 OS=Mu	no	no	0.953	0.552	0.426	2e-30
Q5ZKU1	259	DCN1-like protein 1 OS=Ga	yes	no	0.953	0.552	0.44	2e-30
Q9QZ73	259	DCN1-like protein 1 OS=Mu	no	no	0.953	0.552	0.44	3e-30
Q6PH85	259	DCN1-like protein 2 OS=Ho	no	no	0.953	0.552	0.426	6e-30
Q9VUQ8	288	DCN1-like protein OS=Dros	yes	no	0.953	0.496	0.356	1e-21
A4IHK8	303	DCN1-like protein 3 OS=Xe	no	no	0.933	0.462	0.344	2e-16
Q4V8B2	304	DCN1-like protein 3 OS=Ra	no	no	0.586	0.289	0.420	9e-16
Q5E9V1	304	DCN1-like protein 3 OS=Bo	no	no	0.653	0.322	0.393	1e-15
Q8K0V2	304	DCN1-like protein 3 OS=Mu	no	no	0.586	0.289	0.420	1e-15

>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1

 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 7/150 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ G+  LG DS++K + +I  M  ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic progression.
Homo sapiens (taxid: 9606)

>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 97/150 (64%), Gaps = 7/150 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct: 1   MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY+RYKDP   + I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct: 61  DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ G+  LG DS ++ +  +  +  ELKD
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKD 150

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Mus musculus (taxid: 10090)

>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 7/150 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ G+  LG DS++K + +I  M  ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation.

Gallus gallus (taxid: 9031)

>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 7/150 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY RYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ G+  LG DS++K + +I  M  ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic in vivo.

Mus musculus (taxid: 10090)

>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1

 Score =  129 bits (324), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 7/150 (4%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  
Sbjct: 1   MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++
Sbjct: 61  DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ G+  LG DS++K +  +  +  ELKD
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKD 150

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Homo sapiens (taxid: 9606)

>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%)

Query: 1   MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
           M+KL S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + 
Sbjct: 1   MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60

Query: 59  LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
           +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI 
Sbjct: 61  IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120

Query: 118 GLQSLGIDSLDKFRERISFMRAELKD 143
           G+  LGIDS+DK + ++  +  EL D
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELND 146

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Drosophila melanogaster (taxid: 7227)

>sp|A4IHK8|DCNL3_XENTR DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 11/151 (7%)

Query: 2   HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSL 53
           HK S S++D   + +SI G AS +  +   K  D  LE       G       Q     L
Sbjct: 28  HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAEL 84

Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           +  + +EEL+ RYKD   D IL +G+   CNDL VDP +  +LV++W  +AATMC+F+++
Sbjct: 85  SSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRR 144

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDE 144
           EF  G +++  D ++    R   +  E K E
Sbjct: 145 EFFEGCKAINADGIEGICARFPSLLNEAKQE 175

Xenopus tropicalis (taxid: 8364)

>sp|Q4V8B2|DCNL3_RAT DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
            G +++  DS+D    R   +  E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176

Rattus norvegicus (taxid: 10116)

>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 47  QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
           +P+S +   + + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AA
Sbjct: 78  EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137

Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDE 144
           TMC+F+++EF  G +++  DS+D    R   +  E K E
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQE 176

Bos taurus (taxid: 9913)

>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
            G +++  DS+D    R   +  E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
255555594	261	Defective in cullin neddylation protein,	0.966	0.555	0.889	5e-73
224098848	259	predicted protein [Populus trichocarpa]	0.966	0.559	0.841	9e-71
359494685	259	PREDICTED: DCN1-like protein 2-like [Vit	0.966	0.559	0.834	1e-68
297736127	309	unnamed protein product [Vitis vinifera]	0.966	0.469	0.834	1e-68
343171976	249	hypothetical protein, partial [Silene la	0.966	0.582	0.848	1e-68
343171974	249	hypothetical protein, partial [Silene la	0.966	0.582	0.848	3e-68
356525740	259	PREDICTED: DCN1-like protein 2-like [Gly	0.966	0.559	0.827	2e-67
356557032	259	PREDICTED: uncharacterized protein LOC10	0.966	0.559	0.820	2e-67
388500426	259	unknown [Lotus japonicus]	0.96	0.555	0.826	1e-66
449519908	259	PREDICTED: DCN1-like protein 2-like [Cuc	0.966	0.559	0.813	2e-66

>gi|255555594|ref|XP_002518833.1| Defective in cullin neddylation protein, putative [Ricinus communis] gi|223542006|gb|EEF43551.1| Defective in cullin neddylation protein, putative [Ricinus communis]

 Score =  278 bits (711), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 129/145 (88%), Positives = 140/145 (96%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NRDK+QQF++ITGASEKAALQALKASDWHLEGAFDVFYS PQ K+ TD+RHLE
Sbjct: 1   MHKLTRGNRDKVQQFMTITGASEKAALQALKASDWHLEGAFDVFYSHPQIKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           +LGIDSL+KFRERI FMR+ELKDE+
Sbjct: 121 ALGIDSLEKFRERIPFMRSELKDEQ 145

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098848|ref|XP_002311289.1| predicted protein [Populus trichocarpa] gi|222851109|gb|EEE88656.1| predicted protein [Populus trichocarpa]

 Score =  271 bits (692), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 122/145 (84%), Positives = 138/145 (95%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NR+K+QQF+SITG SEK A+QALKASDWHLEGAFD FYSQPQS++ TD+RHLE
Sbjct: 1   MHKLNRGNREKVQQFMSITGTSEKVAVQALKASDWHLEGAFDAFYSQPQSRTYTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DM+LVDGIT+LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMVLVDGITILCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           SLG+DSLDKFRE+I +MR+EL DE+
Sbjct: 121 SLGVDSLDKFREKIPYMRSELMDEQ 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494685|ref|XP_002263696.2| PREDICTED: DCN1-like protein 2-like [Vitis vinifera]

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 135/145 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 61  ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           +LGIDSL+KFRERI FMR ELKDE+
Sbjct: 121 ALGIDSLEKFRERIQFMRTELKDEQ 145

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736127|emb|CBI24165.3| unnamed protein product [Vitis vinifera]

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 135/145 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 43  MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 102

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 103 ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 162

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           +LGIDSL+KFRERI FMR ELKDE+
Sbjct: 163 ALGIDSLEKFRERIQFMRTELKDEQ 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171976|gb|AEL98692.1| hypothetical protein, partial [Silene latifolia]

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/145 (84%), Positives = 133/145 (91%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY DMIL DGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  ELYNRYKDPYADMILADGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           SLGIDSL+KFRERI ++R+ELKDE+
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQ 145

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171974|gb|AEL98691.1| hypothetical protein, partial [Silene latifolia]

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 123/145 (84%), Positives = 133/145 (91%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           E YNRYKDPY DMILVDGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  EHYNRYKDPYADMILVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           SLGIDSL+KFRERI ++R+ELKDE+
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQ 145

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525740|ref|XP_003531481.1| PREDICTED: DCN1-like protein 2-like [Glycine max]

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/145 (82%), Positives = 134/145 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKLALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           SLGIDSL+KFRE+I +MR+ELKDE+
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDEQ 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557032|ref|XP_003546822.1| PREDICTED: uncharacterized protein LOC100527072 [Glycine max]

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 134/145 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FY+QPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKIALQALKASDWHLEGAFDFFYNQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGIT+LCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITVLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           SLGIDSLDKFRE+I +MR+ELKDE+
Sbjct: 121 SLGIDSLDKFREKIPYMRSELKDEQ 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500426|gb|AFK38279.1| unknown [Lotus japonicus]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/144 (82%), Positives = 133/144 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQ+LKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKVALQSLKASDWHLEGAFDFFYSQPQLKASTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDQYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDE 144
           SLGIDSL+KFRE+I +MR+ELKDE
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDE 144

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519908|ref|XP_004166976.1| PREDICTED: DCN1-like protein 2-like [Cucumis sativus]

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 118/145 (81%), Positives = 134/145 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R +RDKL QF++ITG SEK A QALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLTRGHRDKLHQFMAITGTSEKVAHQALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGI+LLC+DLQVDPQDIVMLVVSWHMKA TMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDSYVDMILADGISLLCDDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDER 145
           +LGIDSL++FRERI +MR+ELKD++
Sbjct: 121 ALGIDSLERFRERIPYMRSELKDDQ 145

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
TAIR|locus:2087720	250	AT3G12760 "AT3G12760" [Arabido	0.966	0.58	0.760	2.2e-57
UNIPROTKB|Q96GG9	259	DCUN1D1 "DCN1-like protein 1"	0.953	0.552	0.446	3.8e-30
UNIPROTKB|I3L7H0	259	DCUN1D1 "Uncharacterized prote	0.953	0.552	0.446	3.8e-30
ZFIN|ZDB-GENE-030131-5443	282	dcun1d1 "DCN1, defective in cu	0.96	0.510	0.446	7.9e-30
MGI|MGI:2142792	259	Dcun1d2 "DCN1, defective in cu	0.953	0.552	0.426	1e-29
UNIPROTKB|Q5ZKU1	259	DCUN1D1 "DCN1-like protein 1"	0.953	0.552	0.44	1.3e-29
UNIPROTKB|E2QV42	262	DCUN1D1 "Uncharacterized prote	0.946	0.541	0.442	1.3e-29
UNIPROTKB|F1NPG9	258	DCUN1D1 "DCN1-like protein 1"	0.946	0.550	0.436	4.4e-29
UNIPROTKB|F1MDM6	244	DCUN1D1 "Uncharacterized prote	0.833	0.512	0.439	4.6e-25
ZFIN|ZDB-GENE-040625-171	204	dcun1d2 "DCN1, defective in cu	0.62	0.455	0.468	6.5e-19

TAIR|locus:2087720 AT3G12760 "AT3G12760" [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 111/146 (76%), Positives = 129/146 (88%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKS-LTDTRHL 59
             MHKLSRSNRDKLQQFV+ITGASEK ALQALKASDWHLE AFDVFYSQPQ +S   + R L
Sbjct:     1 MHKLSRSNRDKLQQFVAITGASEKNALQALKASDWHLEAAFDVFYSQPQPRSNAAEVRRL 60

Query:    60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
             EELYNRYKDPY DMIL +GI++LCNDL+V+PQDIV LV+SWHM AAT CEFS+QEFI GL
Sbjct:    61 EELYNRYKDPYSDMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACEFSRQEFISGL 120

Query:   120 QSLGIDSLDKFRERISFMRAELKDER 145
             Q+LG+DS+ K +E++ FMR+ELKDE+
Sbjct:   121 QALGVDSIGKLQEKLPFMRSELKDEQ 146

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q96GG9 DCUN1D1 "DCN1-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 67/150 (44%), Positives = 96/150 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
             EF+ G+  LG DS++K + +I  M  ELK+
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

GO:0008150 "biological_process" evidence=ND

GO:0000151 "ubiquitin ligase complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7H0 DCUN1D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 67/150 (44%), Positives = 96/150 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
             EF+ G+  LG DS++K + +I  M  ELK+
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

GO:0000151 "ubiquitin ligase complex" evidence=IEA

ZFIN|ZDB-GENE-030131-5443 dcun1d1 "DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 67/150 (44%), Positives = 97/150 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP----QS-KSLTD 55
             M+KL  S +DK++QF+  T ++EK AL  L  +DW L+ A D F+  P    Q+ K   D
Sbjct:    26 MNKLKSSQKDKVRQFMIFTQSNEKTALNCLSQNDWKLDVATDNFFQHPDLYVQNLKGTLD 85

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRY+DP  D  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    86 RKKLEQLYNRYRDPQDDNKIGIDGIQQFCDDLGLDPASISVLLIAWKFRAATQCEFSKQE 145

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDE 144
             F+ G+   G DS++K + ++  M  ELKD+
Sbjct:   146 FMEGMAEQGCDSIEKLKAQLPRMEQELKDQ 175

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:2142792 Dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 64/150 (42%), Positives = 97/150 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct:     1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct:    61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
             EF+ G+  LG DS ++ +  +  +  ELKD
Sbjct:   121 EFVDGMTELGCDSTERLKALLPRLEQELKD 150

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5ZKU1 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 66/150 (44%), Positives = 95/150 (63%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
             EF+ G+  LG DS++K + +I  M  ELK+
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|E2QV42 DCUN1D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 66/149 (44%), Positives = 95/149 (63%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     5 NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 64

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    65 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 124

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKD 143
             F+ G+  LG DS++K + +I  M  ELK+
Sbjct:   125 FMDGMTELGCDSIEKLKAQIPKMEQELKE 153

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1NPG9 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 65/149 (43%), Positives = 94/149 (63%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     1 NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 60

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK E
Sbjct:    61 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 120

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKD 143
             F+ G+  LG DS++K + +I  M  ELK+
Sbjct:   121 FMDGMTELGCDSIEKLKAQIPKMEQELKE 149

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1MDM6 DCUN1D1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 58/132 (43%), Positives = 83/132 (62%)

Query:    19 TGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD 72
             T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY+RYKDP  +
Sbjct:     4 TQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYSRYKDPQDE 63

Query:    73 -MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
               I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K +
Sbjct:    64 NKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLK 123

Query:   132 ERISFMRAELKD 143
              +I  M  ELK+
Sbjct:   124 AQIPKMEQELKE 135

GO:0000151 "ubiquitin ligase complex" evidence=IEA

ZFIN|ZDB-GENE-040625-171 dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 44/94 (46%), Positives = 62/94 (65%)

Query:    51 KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE 109
             K+  D R L+ LY+RYKDP  +  I VDGI   C+DL +DP  + +L+V+W  +AAT CE
Sbjct:     2 KTAVDRRKLDLLYSRYKDPQDENKIGVDGIQQFCDDLMLDPASVSVLIVAWKFRAATQCE 61

Query:   110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAELKD 143
             FS+QEF+ G+  LG DS +K +  +  +  ELKD
Sbjct:    62 FSRQEFLDGMTDLGCDSPEKLKSLLPRLEQELKD 95

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG3077	260	consensus Uncharacterized conserved protein [Funct	100.0
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	99.49
smart00804	63	TAP_C C-terminal domain of vertebrate Tap protein.	98.1
PF03943	51	TAP_C: TAP C-terminal domain; InterPro: IPR005637	98.04
KOG1364	356	consensus Predicted ubiquitin regulatory protein,	97.34
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	97.1
smart00165	37	UBA Ubiquitin associated domain. Present in Rad23,	96.15
cd00194	38	UBA Ubiquitin Associated domain. The UBA domain is	96.07
KOG2086	380	consensus Protein tyrosine phosphatase SHP1/Cofact	95.67
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	95.12
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	94.86
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	94.46
KOG3763	585	consensus mRNA export factor TAP/MEX67 [RNA proces	94.1
cd00052	67	EH Eps15 homology domain; found in proteins implic	93.84
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	93.52
PTZ00183	158	centrin; Provisional	93.42
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	93.37
PRK06369	115	nac nascent polypeptide-associated complex protein	93.24
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	92.81
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	92.54
PF02845	42	CUE: CUE domain; InterPro: IPR003892 This domain m	92.46
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	92.41
PTZ00184	149	calmodulin; Provisional	92.21
PTZ00184	149	calmodulin; Provisional	92.08
PTZ00183	158	centrin; Provisional	91.93
KOG4351	244	consensus Uncharacterized conserved protein [Funct	91.9
TIGR01446	73	DnaD_dom DnaD and phage-associated domain. This mo	91.9
smart00546	43	CUE Domain that may be involved in binding ubiquit	91.81
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	91.65
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	90.91
cd00213	88	S-100 S-100: S-100 domain, which represents the la	89.89
KOG0036	463	consensus Predicted mitochondrial carrier protein	88.54
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	88.21
KOG2756	349	consensus Predicted Mg2+-dependent phosphodiestera	88.07
PRK12332	198	tsf elongation factor Ts; Reviewed	87.78
CHL00098	200	tsf elongation factor Ts	87.68
TIGR00116	290	tsf translation elongation factor Ts. This protein	87.33
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	86.45
PRK09377	290	tsf elongation factor Ts; Provisional	86.43
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	86.41
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	86.28
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	86.23
PF05517	154	p25-alpha: p25-alpha ; InterPro: IPR008907 This fa	85.8
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	84.47
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	83.77
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	83.24
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	80.68
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	80.27

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.3e-37  Score=250.52  Aligned_cols=149  Identities=46%  Similarity=0.848  Sum_probs=139.3

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhh-hhhhhccCCC------CCcCCHHHHHHHHHHhcCCCC-C
Q 031969            1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGA-FDVFYSQPQS------KSLTDTRHLEELYNRYKDPYL-D   72 (150)
Q Consensus         1 m~~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~A-i~~f~~~~~~------~~~~~~~~l~~lFd~Y~d~~~-d   72 (150)
                      |++|+..+++.+++|+.+|++++++++.+|.+++|++..| ...||.++..      .+.++.+.++++|.+|+||+. +
T Consensus         1 mnklk~~~~d~~~~~~~~~~~~~~~s~~~~~~~dw~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~l~~~f~~y~d~~d~~   80 (260)
T KOG3077|consen    1 MNKLKSSQKDKFEQFMSFTASRKKTSLSCLAACDWNLKYAFNDSYYTNPQSLREESVQARVSEKRLEELFNQYKDPDDDN   80 (260)
T ss_pred             CCccchhHHHHHHhhcccccccchhhhhhhcccccccchhcccchhcchhHHHHhhhhccccHHHHHHHHHHhcCccccc
Confidence            8899999999999999999999999999999999999999 6666666543      235789999999999999976 6


Q ss_pred             ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHHcCCCccccC
Q 031969           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDERTCTG  149 (150)
Q Consensus        73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l~~~~~Fk~  149 (150)
                      .|++||+.+||+||||+|+++++|||||+|+|++||+|||++|+.||.+++|||+++|+.+|+.++..|+|.+.||+
T Consensus        81 ~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~A~~m~~Fsr~ef~~g~~~l~~dS~d~lq~~l~~l~~~l~d~~~Fk~  157 (260)
T KOG3077|consen   81 LIGPDGIEKFCEDLGVEPEDISVLVLAWKLGAATMCEFSREEFLKGMTALGCDSIDKLQQRLDFLRSVLKDLEKFKS  157 (260)
T ss_pred             ccChHHHHHHHHHhCCCchhHHHHHHHHHhccchhhhhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHccHHHhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998899985

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=99.49  E-value=3.2e-14  Score=86.58  Aligned_cols=41  Identities=41%  Similarity=0.793  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      +++|++|++|||+++.+|++||+.++|||+.||+.||+++.
T Consensus         1 ~e~i~~F~~iTg~~~~~A~~~L~~~~wdle~Av~~y~~~~~   41 (43)
T PF14555_consen    1 DEKIAQFMSITGADEDVAIQYLEANNWDLEAAVNAYFDDGE   41 (43)
T ss_dssp             HHHHHHHHHHH-SSHHHHHHHHHHTTT-HHHHHHHHHHSS-
T ss_pred             CHHHHHHHHHHCcCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999998754

>smart00804 TAP_C C-terminal domain of vertebrate Tap protein

Probab=98.10  E-value=6.4e-06  Score=54.03  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=41.4

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      .++..|.++|.+|+..||.+..-++.+|+.++||++.|+..|-+
T Consensus         7 ~~~~~q~~~v~~~~~~Tgmn~~~s~~cLe~~~Wd~~~Al~~F~~   50 (63)
T smart00804        7 TLSPEQQEMVQAFSAQTGMNAEYSQMCLEDNNWDYERALKNFTE   50 (63)
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999965

The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for the nuclear export of mRNA. Its most C-terminal domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate shuttling. This domain forms a compact four-helix fold related to that of a UBA domain.

>PF03943 TAP_C: TAP C-terminal domain; InterPro: IPR005637 This entry contains the NXF family of shuttling transport receptors for nuclear export of mRNA, which include: vertebrate mRNA export factor TAP or nuclear RNA export factor 1 (NXF1)

Probab=98.04  E-value=3.7e-06  Score=52.90  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      +++|.+|+..||.+..-|..||+.++||++.|+..|-...
T Consensus         1 q~mv~~~s~~Tgmn~~~s~~CL~~n~Wd~~~A~~~F~~l~   40 (51)
T PF03943_consen    1 QEMVQQFSQQTGMNLEWSQKCLEENNWDYERALQNFEELK   40 (51)
T ss_dssp             HHHHHHHHHHCSS-CCHHHHHHHHTTT-CCHHHHHHHHCC
T ss_pred             CHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999997553

Caenorhabditis elegans nuclear RNA export factor 1 (nxf-1). yeast mRNA export factor MEX67. Members of the NXF family have a modular structure. A nuclear localization sequence and a noncanonical RNA recognition motif (RRM) (see PDOC00030 from PROSITEDOC) followed by four LRR repeats are located in its N-terminal half. The C-terminal half contains a NTF2 domain (see PDOC50177 from PROSITEDOC) followed by a second domain, TAP-C. The TAP-C domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate nuclear shuttling [,]. The Tap-C domain is made of four alpha helices packed against each other. The arrangement of helices 1, 2 and 3 is similar to that seen in a UBA fold. and is joined to the next module by flexible 12-residue Pro-rich linker [, ].; GO: 0051028 mRNA transport, 0005634 nucleus; PDB: 1OAI_A 1GO5_A 2KHH_A 2JP7_A.

>KOG1364 consensus Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Posttranslational modification, protein turnover, chaperones]

Probab=97.34  E-value=0.00021  Score=60.79  Aligned_cols=43  Identities=33%  Similarity=0.585  Sum_probs=39.5

Q ss_pred             cchHHHHHHHHHHhC-CCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            6 RSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         6 ~~~~~~i~~F~~iT~-~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .++.++|.+|+.||+ .+.+.|++||+..+|+|+.||+-||+..
T Consensus         4 ~~~~~lv~~fl~It~~~t~e~A~q~L~~~~~~le~ai~Lffe~~   47 (356)
T KOG1364|consen    4 GAQRALVSKFLAITVQQTVEIATQYLSAADWDLEAAINLFFEHG   47 (356)
T ss_pred             chHHHHHHHHHHHhccccHHHHHHHHHhcCCcHHHHHHHHHHhc
Confidence            467889999999999 7899999999999999999999999764

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=97.10  E-value=0.0011  Score=38.49  Aligned_cols=33  Identities=36%  Similarity=0.528  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~   42 (150)
                      .+.|++.++. |.++..|+..|+.++||++.|++
T Consensus         3 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~   35 (37)
T PF00627_consen    3 EEKVQQLMEM-GFSREQAREALRACNGNVERAVD   35 (37)
T ss_dssp             HHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHH
Confidence            5789999999 99999999999999999999986

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

>smart00165 UBA Ubiquitin associated domain

Probab=96.15  E-value=0.011  Score=33.85  Aligned_cols=35  Identities=31%  Similarity=0.527  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f   44 (150)
                      .+.|.+++++ |.++..|+..|+.++||++.|++-.
T Consensus         2 ~~~v~~L~~m-Gf~~~~a~~aL~~~~~d~~~A~~~L   36 (37)
T smart00165        2 EEKIDQLLEM-GFSREEALKALRAANGNVERAAEYL   36 (37)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHH
Confidence            3567788776 9999999999999999999998754

Present in Rad23, SNF1-like kinases. The newly-found UBA in p62 is known to bind ubiquitin.

>cd00194 UBA Ubiquitin Associated domain

Probab=96.07  E-value=0.014  Score=33.57  Aligned_cols=36  Identities=31%  Similarity=0.461  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      .+.|.++++ .|.++..|+..|+.++||++.|++-.+
T Consensus         2 ~~~v~~L~~-mGf~~~~~~~AL~~~~~d~~~A~~~L~   37 (38)
T cd00194           2 EEKLEQLLE-MGFSREEARKALRATNNNVERAVEWLL   37 (38)
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            356778877 499999999999999999999998654

The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.

>KOG2086 consensus Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion [Nuclear structure]

Probab=95.67  E-value=0.003  Score=54.41  Aligned_cols=42  Identities=29%  Similarity=0.292  Sum_probs=38.4

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ...+.+++|+.+||.++..|++||..++|+++.|...++...
T Consensus         3 ~p~~~ls~f~~~t~~se~~~~~~l~s~~~d~~~a~~~~~~~~   44 (380)
T KOG2086|consen    3 IPLDSLSEFRAVTGPSESRARFYLESIYWDREAAHRSELEAF   44 (380)
T ss_pred             CchhHHHHHhccCCCCccccccccccCCCchhhhhhhhcccc
Confidence            346789999999999999999999999999999999999753

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=95.12  E-value=0.16  Score=30.03  Aligned_cols=61  Identities=11%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      +..+|..|....++.|+.+-+...+..+|..+....+-.+...+....-|.++-++|+..+
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            5678888865444689999999999999999887777777778877778999999998653

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=94.86  E-value=0.1  Score=31.76  Aligned_cols=50  Identities=14%  Similarity=0.041  Sum_probs=45.9

Q ss_pred             CccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           72 DMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        72 d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..|+.+.+.+.+..+|++ +.+-.+=.|-..+-...-|.|+.+||+..|+.
T Consensus         3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            479999999999889999 88888889999999999999999999999875

...

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=94.46  E-value=0.18  Score=34.56  Aligned_cols=68  Identities=13%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhcCCC--CCccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           57 RHLEELYNRYKDPY--LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~--~d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ..|...|..|-+.+  ...|+.+-+..++..     +|..+....+--+...+....-|.|+-++|+..|..+.+
T Consensus         8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031           8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            45777899996622  369999999999876     677776665555556677778899999999999988764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]

Probab=94.10  E-value=0.064  Score=48.51  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      .++|..|++.||....-+..+|++++||.+.|+..|-+-.+
T Consensus       536 ~e~l~~~~~~tGln~~~s~~c~e~~nWdy~~A~k~F~~~ks  576 (585)
T KOG3763|consen  536 DEKLLKFQEETGLNSEWSTMCLEQNNWDYERALKLFIELKS  576 (585)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHccCCHHHHHHHHHHhhc
Confidence            56788999999999999999999999999999999976543

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=93.84  E-value=0.28  Score=30.50  Aligned_cols=62  Identities=8%  Similarity=0.060  Sum_probs=44.9

Q ss_pred             HHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        60 ~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      .++|..|-......|+.+.+.+++..+|++.+.+.-  +...+....-|.|+.++|+..|..+.
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~--i~~~~d~~~~g~i~~~ef~~~~~~~~   63 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQ--IWDLADTDKDGKLDKEEFAIAMHLIA   63 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            357777733233689999999999999985444333  33456666789999999999987643

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=93.52  E-value=0.53  Score=32.26  Aligned_cols=66  Identities=15%  Similarity=0.165  Sum_probs=51.1

Q ss_pred             HHHHHHHHHhcCCC--CCccchHHHHHHHhh---cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPY--LDMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~--~d~I~~dG~~~~~ed---Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|...+  .+.|+.+.+.+++..   +|..+.+-.+--+-..+....-|.|+-++|+.-+..+
T Consensus        10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l   80 (88)
T cd05029          10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL   80 (88)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            45788999998633  359999999999974   6877665555555556677777999999999877765

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PTZ00183 centrin; Provisional

Probab=93.42  E-value=0.64  Score=33.57  Aligned_cols=67  Identities=12%  Similarity=0.118  Sum_probs=51.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+.+..+|..+|..+.+-.+-.+...+....-|.|+.++|+..+..
T Consensus        88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            3467888998774333468999999999999997776666666666676666789999999988765

>TIGR00264 alpha-NAC-related protein

Probab=93.37  E-value=0.14  Score=37.44  Aligned_cols=34  Identities=21%  Similarity=0.222  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~   42 (150)
                      .+.|.-.++-||+|++.|+..|++++||+-.||-
T Consensus        79 ~eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~  112 (116)
T TIGR00264        79 EDDIELVMKQCNVSKEEARRALEECGGDLAEAIM  112 (116)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHH
Confidence            4568888999999999999999999999988875

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=93.24  E-value=0.15  Score=37.27  Aligned_cols=35  Identities=26%  Similarity=0.298  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~   43 (150)
                      .+.|.-.++-||+|+..|+..|+.++||+-.||-.
T Consensus        77 ~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~~  111 (115)
T PRK06369         77 EEDIELVAEQTGVSEEEARKALEEANGDLAEAILK  111 (115)
T ss_pred             HHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHH
Confidence            46788899999999999999999999999888753

>smart00027 EH Eps15 homology domain

Probab=92.81  E-value=0.51  Score=32.35  Aligned_cols=65  Identities=8%  Similarity=0.037  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.+.|..|-......|+.+-+.+.+..+|++.+.+.-+.-  .+....-|.|+.++|+..|..+
T Consensus         9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~--~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWN--LADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHH--HhcCCCCCCcCHHHHHHHHHHH
Confidence            3567778887754344699999999999999987666554332  3455667999999999988774

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=92.54  E-value=0.82  Score=28.62  Aligned_cols=62  Identities=13%  Similarity=0.129  Sum_probs=44.1

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCC-cHHHHHHHH---hhcccccccccHHHHHHHh
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQ-DIVMLVVSW---HMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~pe-d~~~LvLa~---~l~a~~~g~~tr~eF~~g~  119 (150)
                      +|.++|+.|=-.....|+.+-+.+++..++.... ...--.+..   .+-...-|.|+.+||++.|
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            4778899986545579999999999999998752 222223222   3334456999999999754

...

>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=92.46  E-value=0.27  Score=29.03  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            9 RDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         9 ~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      .+.|++..++. +.++..-+..|+++++|++.|++..++
T Consensus         2 ~~~v~~L~~mFP~~~~~~I~~~L~~~~~~ve~ai~~LL~   40 (42)
T PF02845_consen    2 EEMVQQLQEMFPDLDREVIEAVLQANNGDVEAAIDALLE   40 (42)
T ss_dssp             HHHHHHHHHHSSSS-HHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            46788888887 557889999999999999999998764

CUE domains also occur in two proteins of the IL-1 signal transduction pathway, tollip and TAB2.; GO: 0005515 protein binding; PDB: 2EKF_A 1OTR_A 1P3Q_Q 1MN3_A 1WGL_A 2EJS_A 2DAE_A 2DHY_A 2DI0_A.

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=92.41  E-value=0.6  Score=31.79  Aligned_cols=66  Identities=11%  Similarity=0.099  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHh-hcCCCCC----cHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCN-DLQVDPQ----DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~e-dLgv~pe----d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|...++  +.|+.+.+..++. .+|-.+.    +-.+=-+-..+....-|.|+-++|+..+..+
T Consensus         8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~   80 (88)
T cd05030           8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV   80 (88)
T ss_pred             HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            457789999997643  6999999999997 4443332    2333333344556667999999999998875

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>PTZ00184 calmodulin; Provisional

Probab=92.21  E-value=2.3  Score=30.09  Aligned_cols=19  Identities=21%  Similarity=0.064  Sum_probs=11.9

Q ss_pred             ccccccHHHHHHHhHHcCC
Q 031969          106 TMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus       106 ~~g~~tr~eF~~g~~~l~~  124 (150)
                      .-|.+++++|..++..+|.
T Consensus        97 ~~g~i~~~e~~~~l~~~~~  115 (149)
T PTZ00184         97 GNGFISAAELRHVMTNLGE  115 (149)
T ss_pred             CCCeEeHHHHHHHHHHHCC
Confidence            3466666666666666554

>PTZ00184 calmodulin; Provisional

Probab=92.08  E-value=0.97  Score=32.06  Aligned_cols=65  Identities=9%  Similarity=0.088  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|--...+.|+.+-+.++|..+|+.+.+..+-.+...+....-|.|+.++|+..+.
T Consensus        83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            46788899998433346899999999999999887665555555666556679999999997653

>PTZ00183 centrin; Provisional

Probab=91.93  E-value=2.2  Score=30.70  Aligned_cols=17  Identities=18%  Similarity=0.175  Sum_probs=9.3

Q ss_pred             cccccHHHHHHHhHHcC
Q 031969          107 MCEFSKQEFIGGLQSLG  123 (150)
Q Consensus       107 ~g~~tr~eF~~g~~~l~  123 (150)
                      -|.+++++|...+..+|
T Consensus       104 ~G~i~~~e~~~~l~~~~  120 (158)
T PTZ00183        104 TGKISLKNLKRVAKELG  120 (158)
T ss_pred             CCcCcHHHHHHHHHHhC
Confidence            35555555555555544

>KOG4351 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.90  E-value=0.049  Score=44.21  Aligned_cols=45  Identities=20%  Similarity=0.407  Sum_probs=38.9

Q ss_pred             CcchHHHHHHHHHHhCCC--H-HHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            5 SRSNRDKLQQFVSITGAS--E-KAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         5 ~~~~~~~i~~F~~iT~~~--~-~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      +.++..+|.+|.++++..  + .-|++||+-.+|||..|+..||+..+
T Consensus        20 t~dr~~Li~qf~~lm~~qm~P~~~aaF~Ld~knW~lqna~sv~~d~~t   67 (244)
T KOG4351|consen   20 TTDRPELIHQFQRLMNTQMNPMLSAAFVLDMKNWNLQNAGSVYWDQDT   67 (244)
T ss_pred             CCCcHHHHHHHHHHhhhccCcccccceeeeccceeccccccEEEcCCC
Confidence            447788999999999863  5 67999999999999999999998754

>TIGR01446 DnaD_dom DnaD and phage-associated domain

Probab=91.90  E-value=0.48  Score=30.84  Aligned_cols=57  Identities=7%  Similarity=0.212  Sum_probs=41.1

Q ss_pred             CccchHHHHHHHhhcCCCCCcHHHHHHHHhh--cccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969           72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (150)
Q Consensus        72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l--~a~~~g~~tr~eF~~g~~~l~~dsi~~lk  131 (150)
                      .....+-+..++++.|.+|+ ++..++-+-+  +.++++.+  +.-+..|+.-|+.|+++.+
T Consensus        14 s~~e~~~i~~~~~~~~~~~e-vI~~ai~~a~~~~~~~~~Yi--~~Il~~W~~~gi~T~e~~~   72 (73)
T TIGR01446        14 SPFEMEDLKYWLDEFGNSPE-LIKEALKEAVSNNKANYKYI--DAILNNWKNNGIKTVEDVE   72 (73)
T ss_pred             CHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHHH--HHHHHHHHHcCCCCHHHHh
Confidence            34667888899999998755 6666665544  34445433  4778889999999999875

This model represents the conserved domain of DnaD, part of Bacillus subtilis replication restart primosome, and of a number of phage-associated proteins. Members, both chromosomal or phage-associated, are found in the Bacillus/Clostridium group of Gram-positive bacteria.

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=91.81  E-value=0.5  Score=27.92  Aligned_cols=38  Identities=13%  Similarity=0.245  Sum_probs=31.1

Q ss_pred             HHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969           10 DKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus        10 ~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      +.+.+..++. +.++...+..|+++++|++.|++...+.
T Consensus         4 ~~v~~L~~mFP~l~~~~I~~~L~~~~g~ve~~i~~LL~~   42 (43)
T smart00546        4 EALHDLKDMFPNLDEEVIKAVLEANNGNVEATINNLLEG   42 (43)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence            4566666665 5688999999999999999999988754

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=91.65  E-value=0.49  Score=31.50  Aligned_cols=64  Identities=11%  Similarity=0.199  Sum_probs=45.5

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhh----cCCCCCcHHHHHHHHhhc--ccccccccHHHHHHHhHHc
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCND----LQVDPQDIVMLVVSWHMK--AATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~ed----Lgv~ped~~~LvLa~~l~--a~~~g~~tr~eF~~g~~~l  122 (150)
                      .|..+|.+|.+ +...|+++.+.+|+.+    -.++++.+.-++--+.-.  ....+.+|.++|+.-+..=
T Consensus         1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~   70 (83)
T PF09279_consen    1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD   70 (83)
T ss_dssp             HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred             CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence            47889999988 6679999999999953    344555555554443222  2246899999999887653

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=90.91  E-value=1.8  Score=29.72  Aligned_cols=67  Identities=13%  Similarity=0.153  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhcCCCCC--ccchHHHHHHHhh-c----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           57 RHLEELYNRYKDPYLD--MILVDGITLLCND-L----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d--~I~~dG~~~~~ed-L----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..+...|.+|.+.+++  .|+.+-+..++.. +    +-.+.+-.+=-+...+....=|.|+-+||+.-+..|-
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            3455669999977664  6999999999976 3    3333333444455566666779999999999887763

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=89.89  E-value=2  Score=28.67  Aligned_cols=66  Identities=12%  Similarity=0.100  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhcC--CCCCccchHHHHHHHhh-cCCCC----CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKD--PYLDMILVDGITLLCND-LQVDP----QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d--~~~d~I~~dG~~~~~ed-Lgv~p----ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.+...|..|-.  ...+.|+.+.+.+++.. +|..+    ....+=-+-..+....-|.|+-++|+..|..+
T Consensus         8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            456777888865  34468999999999976 56433    23333334445566778999999999988874

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=88.54  E-value=1.6  Score=38.54  Aligned_cols=82  Identities=15%  Similarity=0.053  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~  135 (150)
                      ..+|-.+|.+-.-..+..|++..+.++|.|+|+++.|...--+-..+--..-+.|.-+||.+-+.-.-   .+.|..-+.
T Consensus        81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p---~s~i~di~~  157 (463)
T KOG0036|consen   81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP---ESDLEDIYD  157 (463)
T ss_pred             HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC---hhHHHHHHH
Confidence            35555666655433345999999999999999999998877777777777778999999998766554   444444444


Q ss_pred             HHHHH
Q 031969          136 FMRAE  140 (150)
Q Consensus       136 ~l~~~  140 (150)
                      .++..
T Consensus       158 ~W~h~  162 (463)
T KOG0036|consen  158 FWRHV  162 (463)
T ss_pred             hhhhh
Confidence            44443

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=88.21  E-value=3.7  Score=28.11  Aligned_cols=67  Identities=13%  Similarity=0.116  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHhcCCCCC--ccchHHHHHHHhhc-----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLD--MILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d--~I~~dG~~~~~edL-----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      -..|..+|.+|.+.+++  .|+.+.+..+++.-     +-..++..+--+-..+....=|.|+-+||+.-+..+
T Consensus         8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023           8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            35678899999976553  89999999999775     222222233333445556666999999999877765

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]

Probab=88.07  E-value=0.39  Score=40.39  Aligned_cols=40  Identities=23%  Similarity=0.434  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ++++-+|..+|.+.++.|..+|..+.|.+..|++.||...
T Consensus        26 ~~ll~efa~~~s~dea~aq~~l~~~dw~~~ral~~~~~se   65 (349)
T KOG2756|consen   26 RLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPE   65 (349)
T ss_pred             HHHHHHHHHhhhhHHHhHHHHhhcchhHHHHHHHhhcCce
Confidence            4677899999999999999999999999999999999754

>PRK12332 tsf elongation factor Ts; Reviewed

Probab=87.78  E-value=0.82  Score=36.27  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      .++|++.++.||++--.+..-|..++||++.|++---..
T Consensus         5 a~~ik~LR~~tga~~~~ck~AL~~~~gd~~~A~~~lr~~   43 (198)
T PRK12332          5 AKLVKELREKTGAGMMDCKKALEEANGDMEKAIEWLREK   43 (198)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence            468999999999999999999999999999999877544

>CHL00098 tsf elongation factor Ts

Probab=87.68  E-value=0.83  Score=36.32  Aligned_cols=38  Identities=18%  Similarity=0.284  Sum_probs=34.5

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ++|++.++.||++--.+..-|..++||++.|++---..
T Consensus         3 ~~ik~LR~~Tgag~~dck~AL~e~~gd~~~A~~~Lr~~   40 (200)
T CHL00098          3 ELVKELRDKTGAGMMDCKKALQEANGDFEKALESLRQK   40 (200)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence            67999999999999999999999999999999876544

>TIGR00116 tsf translation elongation factor Ts

Probab=87.33  E-value=0.89  Score=38.11  Aligned_cols=40  Identities=18%  Similarity=0.173  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .++|++.++.||+.--.++.-|..++||++.|++---...
T Consensus         5 a~~IK~LRe~Tgagm~dCKkAL~e~~gDiekAi~~LRkkG   44 (290)
T TIGR00116         5 AQLVKELRERTGAGMMDCKKALTEANGDFEKAIKNLRESG   44 (290)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence            4679999999999999999999999999999998775443

This protein is found in Bacteria, mitochondria, and chloroplasts.

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=86.45  E-value=9  Score=28.15  Aligned_cols=69  Identities=14%  Similarity=0.169  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ...+.+.|..|--.....|..+=+...+..||.+|..-..-.+-..+....-|.|..++|+.-+.....
T Consensus         7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~   75 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGE   75 (151)
T ss_pred             HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhc
Confidence            356777888875433468999999999999999999888888888888888899999999998887655

>PRK09377 tsf elongation factor Ts; Provisional

Probab=86.43  E-value=1.1  Score=37.64  Aligned_cols=40  Identities=20%  Similarity=0.215  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .++|++.++.||+.--.+++-|..++||++.|++---...
T Consensus         6 ~~~IK~LR~~Tgagm~dCKkAL~e~~gD~ekAi~~Lrk~G   45 (290)
T PRK09377          6 AALVKELRERTGAGMMDCKKALTEADGDIEKAIEWLRKKG   45 (290)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence            4789999999999999999999999999999998776543

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=86.41  E-value=1.3  Score=32.74  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~   43 (150)
                      .+-|+=-++-||+|+..|+..|+.++.+|-.||-.
T Consensus        85 eeDIkLV~eQa~VsreeA~kAL~e~~GDlaeAIm~  119 (122)
T COG1308          85 EEDIKLVMEQAGVSREEAIKALEEAGGDLAEAIMK  119 (122)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCcHHHHHHH
Confidence            35577788999999999999999999999888754

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=86.28  E-value=8.1  Score=29.71  Aligned_cols=69  Identities=13%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHhc--CCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           54 TDTRHLEELYNRYK--DPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~--d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      -+...+.+|.+.|.  |+++ ..|+-+-+..++..||.+|.+..+.=|-.-+.+ .-|.++-.+|+..|...-
T Consensus        14 ~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~   85 (160)
T COG5126          14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL   85 (160)
T ss_pred             CCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence            34566777777776  4443 589999999999999999988888777777777 556677777777766643

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=86.23  E-value=6.1  Score=26.63  Aligned_cols=66  Identities=12%  Similarity=0.034  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhcCCCC-C-ccchHHHHHHHhh-cCC----CCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL-D-MILVDGITLLCND-LQV----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed-Lgv----~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|.+.|..|-|.++ . .|+.+-+.+++.. +|.    .|....+=-+-..+....-|.|+-++|+.-+..+
T Consensus         9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            567889999964444 4 5999999999975 553    4444444445555677788999999999877764

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []

Probab=85.80  E-value=6.3  Score=29.72  Aligned_cols=76  Identities=18%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             HHHHHHHhcC---CCCCccchHHHHHHHhhcCCCCCcH---HHHHHHHhhcccccccccHHHHHHHhHHc----CCC--C
Q 031969           59 LEELYNRYKD---PYLDMILVDGITLLCNDLQVDPQDI---VMLVVSWHMKAATMCEFSKQEFIGGLQSL----GID--S  126 (150)
Q Consensus        59 l~~lFd~Y~d---~~~d~I~~dG~~~~~edLgv~ped~---~~LvLa~~l~a~~~g~~tr~eF~~g~~~l----~~d--s  126 (150)
                      |+++|..|+.   .....|+..-..++|.|.||=..-+   .+=++-.+++++.-..|+-++|+..+..+    +++  +
T Consensus         1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~~~~~   80 (154)
T PF05517_consen    1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGKDKSS   80 (154)
T ss_dssp             HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSCCCTH
T ss_pred             CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhccccc
Confidence            6789999953   2346899999999999999953222   22233345677766679999999998875    333  4


Q ss_pred             HHHHHHHH
Q 031969          127 LDKFRERI  134 (150)
Q Consensus       127 i~~lk~~l  134 (150)
                      .+.+..+|
T Consensus        81 ~~~~~~kl   88 (154)
T PF05517_consen   81 AEELKEKL   88 (154)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55555555

It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=84.47  E-value=6.4  Score=30.28  Aligned_cols=69  Identities=12%  Similarity=0.058  Sum_probs=56.1

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+|...|.-|=......|+..-+.+.+.-||-...+-.+=-|-..+....-|+|+.++|++.|..
T Consensus        88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126          88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            344788999999997755579999999999999999987766666656665567899999999998875

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=83.77  E-value=8.4  Score=26.47  Aligned_cols=66  Identities=12%  Similarity=0.015  Sum_probs=48.4

Q ss_pred             HHHHHHHHHhcC-CCCCccchHHHHHHHhh-cCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKD-PYLDMILVDGITLLCND-LQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d-~~~d~I~~dG~~~~~ed-Lgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|...|..|.. ...+.|+.+.+..++.. ||-..++ -.+=-+-..+....=|.|+-+||+.-+..+
T Consensus         8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            457788999976 44579999999999998 9844444 333333344556667999999999877775

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=83.24  E-value=9.4  Score=25.99  Aligned_cols=66  Identities=17%  Similarity=0.127  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhcCCCC-C-ccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|.+.|..|.+.++ . .|+.+-+..++..     +|-.++.-.+=-+-..+....-|.|+-++|+.-+..+
T Consensus         8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~   80 (88)
T cd05027           8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV   80 (88)
T ss_pred             HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            457789999964333 4 6999999999999     9977654433333345566777999999998766553

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=80.68  E-value=3.9  Score=22.04  Aligned_cols=30  Identities=13%  Similarity=0.215  Sum_probs=20.9

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHh-hcC
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCN-DLQ   87 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~e-dLg   87 (150)
                      ++.++|+.|=......|+.+-+...+. .||
T Consensus         1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG   31 (31)
T PF13405_consen    1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG   31 (31)
T ss_dssp             HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence            467788888443346888888888887 676

...

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=80.27  E-value=1.4  Score=24.10  Aligned_cols=16  Identities=19%  Similarity=0.183  Sum_probs=11.0

Q ss_pred             cccccHHHHHHHhHHc
Q 031969          107 MCEFSKQEFIGGLQSL  122 (150)
Q Consensus       107 ~g~~tr~eF~~g~~~l  122 (150)
                      =|.|+.+||+.++++|
T Consensus        14 dG~I~~~Ef~~~~~~L   29 (29)
T PF00036_consen   14 DGKIDFEEFKEMMKKL   29 (29)
T ss_dssp             SSEEEHHHHHHHHHHT
T ss_pred             CCcCCHHHHHHHHHhC
Confidence            4777777777777654

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	150
3tdu_A	200	N-Terminal Acetylation Acts As An Avidity Enhancer		1e-20
4gao_A	200	Dcnl Complex With N-terminally Acetylated Nedd8 E2		1e-18
3kev_A	199	X-Ray Crystal Structure Of A Dcun1 Domain-Containin		9e-18
4gba_A	221	Dcnl Complex With N-terminally Acetylated Nedd8 E2		2e-16

>pdb|3TDU|A Chain A, N-Terminal Acetylation Acts As An Avidity Enhancer Within An Interconnected Multiprotein Complex: Structure Of A Human Cul1whb- Dcn1p-Acetylated Ubc12n Complex Length = 200

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKD 143
           + G+  LG DS++K + +I  M  ELK+
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKE 91

>pdb|4GAO|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 200

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF
Sbjct: 4   KKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKD 143
           + G+  LG DS++K +  +  +  ELKD
Sbjct: 64  LDGMTELGCDSMEKLKALLPRLEQELKD 91

>pdb|3KEV|A Chain A, X-Ray Crystal Structure Of A Dcun1 Domain-Containing Protein From Galdieria Sulfuraria Length = 199

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 63/90 (70%)
Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++  EFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTXEFSEK 63
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ GL +L +DSL+K + ++S +R E++D
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIED 93

>pdb|4GBA|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 221

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 6   QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 65
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
            G +++  DS+D    R   +  E K E
Sbjct: 66  DGCKAISADSIDGICARFPSLLTEAKQE 93

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	2e-37
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	1e-29
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	2e-27
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	1e-06
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	3e-04

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria} Length = 199

 Score =  105 bits (264), Expect = 1e-29
 Identities = 38/90 (42%), Positives = 64/90 (71%)

Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++ CEFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEK 63

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
           EF+ GL +L +DSL+K + ++S +R E++D
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIED 93

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A Length = 200

 Score =  100 bits (250), Expect = 2e-27
 Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 1/93 (1%)

Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63

Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDERTCT 148
           + G+  LG DS++K + +I  M  ELK+     
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKEPGRFK 96

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3 Length = 46

 Score = 42.1 bits (99), Expect = 1e-06
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY  
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 66

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47
          + QFV   G +   A Q L+A+ W  E A   F+ +
Sbjct: 21 INQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQE 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	100.0
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	100.0
4gba_A	221	DCN1-like protein 3; E3 ligase, ligase-peptide com	100.0
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	100.0
2dam_A	67	ETEA protein; KIAA0887, UBA-like domain, structura	99.55
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	99.48
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	99.47
3e21_A	45	HFAF1, FAS-associated factor 1; UBA, alternative s	99.41
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	99.32
2jp7_A	57	MRNA export factor MEX67; solution MEX67, UBA, tra	98.41
1oai_A	59	Nuclear RNA export factor; nuclear transport, nucl	98.36
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	98.26
1z96_A	40	DNA-damage, UBA-domain protein MUD1; ubiquitin, th	97.87
1wj7_A	104	Hypothetical protein (RSGI RUH-015); UBA domain, u	97.65
1jkg_B	250	TAP; NTF2-like domain, transport protein; 1.90A {H	97.14
2l2d_A	73	OTU domain-containing protein 7A; UBA fold, struct	97.0
1ify_A	49	HHR23A, UV excision repair protein RAD23 homolog A	96.83
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	96.82
2g3q_A	43	Protein YBL047C; endocytosis, solution structure,	96.66
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	96.64
1dv0_A	47	DNA repair protein HHR23A; helical bundle, DNA bin	96.64
1vg5_A	73	RSGI RUH-014, rhomboid family protein; UBA domain,	96.61
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	96.57
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	96.51
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	96.48
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	96.43
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	96.41
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	96.36
1veg_A	83	NEDD8 ultimate buster-1; ubiquitin associated doma	96.35
2jy5_A	52	Ubiquilin-1; UBA, alternative splicing, cytoplasm,	96.33
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	96.22
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	96.2
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	96.11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	96.07
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	96.05
3fwb_A	161	Cell division control protein 31; gene gating, com	96.04
2knz_A	53	Ubiquilin-4; cytoplasm, endoplasmic reticulum, nuc	96.03
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	96.0
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	96.0
2dkl_A	85	Trinucleotide repeat containing 6C protein; TNRC6C	95.95
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	95.91
2dah_A	54	Ubiquilin-3; UBA domain, structural genomics, NPPS	95.86
2cp9_A	64	EF-TS, EF-TSMT, elongation factor TS, mitochondria	95.8
1wiv_A	73	UBP14, ubiquitin-specific protease 14; ubiquitin a	95.78
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	95.76
1wji_A	63	Tudor domain containing protein 3; UBA domain, str	95.75
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	95.73
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	95.71
2jnf_A	158	Troponin C; stretch activated muscle contraction,	95.69
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	95.69
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	95.66
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	95.61
1wgn_A	63	UBAP1, ubiquitin associated protein; ubiquitin ass	95.59
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	95.58
3li6_A	66	Calcium-binding protein; calcium signaling protein	95.55
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	95.53
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	95.47
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	95.45
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	95.4
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	95.39
3fwb_A	161	Cell division control protein 31; gene gating, com	95.36
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	95.36
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	95.32
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	95.29
1vej_A	74	Riken cDNA 4931431F19; UBA domain, three helix bun	95.29
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	95.28
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	95.22
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	95.22
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	95.19
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	95.18
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	95.17
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	95.16
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	95.16
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	95.15
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	95.15
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	95.14
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	95.02
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	95.02
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	95.01
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	94.99
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	94.98
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	94.98
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	94.91
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	94.9
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	94.86
1wr1_B	58	Ubiquitin-like protein DSK2; UBA domain, UBA-ubiqu	94.76
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	94.75
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	94.74
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	94.7
2jnf_A	158	Troponin C; stretch activated muscle contraction,	94.68
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	94.68
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	94.67
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	94.67
2bwb_A	46	Ubiquitin-like protein DSK2; UBA, signaling protei	94.65
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	94.61
2ekk_A	47	UBA domain from E3 ubiquitin-protein ligase HUWE1;	94.6
2dai_A	83	Ubadc1, ubiquitin associated domain containing 1;	94.48
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	94.45
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	94.39
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	94.34
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	94.31
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	94.28
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	94.23
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	94.22
1y1x_A	191	Leishmania major homolog of programmed cell death	94.17
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	94.16
2cpw_A	64	CBL-interacting protein STS-1 variant; ubiquitin a	94.13
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	94.12
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	94.11
1y1x_A	191	Leishmania major homolog of programmed cell death	94.11
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	94.08
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	94.07
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	94.06
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	94.02
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	94.01
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	93.92
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	93.92
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	93.86
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	93.84
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	93.84
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	93.83
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	93.82
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	93.8
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	93.79
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	93.62
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	93.56
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	93.53
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	93.49
2cwb_A	108	Chimera of immunoglobulin G binding protein G and	93.45
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	93.38
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	93.38
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	93.35
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	93.28
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	93.26
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	93.25
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	93.22
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	93.14
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	93.13
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	93.12
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	93.08
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	93.04
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	93.03
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	93.01
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	92.99
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	92.98
1whc_A	64	RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain	92.91
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	92.9
1c07_A	95	Protein (epidermal growth factor receptor pathway	92.88
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	92.85
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	92.84
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	92.81
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	92.79
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	92.77
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	92.69
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	92.68
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	92.67
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	92.6
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	92.59
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	92.59
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	92.53
2dag_A	74	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	92.52
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	92.48
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	92.44
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	92.43
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	92.41
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	92.4
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	92.34
1vek_A	84	UBP14, ubiquitin-specific protease 14, putative; U	92.22
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	92.19
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	92.17
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	92.05
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	91.99
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	91.95
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	91.87
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	91.82
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	91.77
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	91.74
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	91.72
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	91.62
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	91.59
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	91.59
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	91.57
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.51
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	91.5
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	91.44
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	91.41
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	91.38
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	91.3
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	91.23
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	91.23
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	91.2
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.0
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	90.98
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	90.9
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	90.83
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	90.8
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	90.75
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	90.6
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	90.49
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	90.46
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	90.44
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	90.43
2lbc_A	126	Ubiquitin carboxyl-terminal hydrolase 13; tandem U	90.42
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	90.4
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	90.3
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	90.26
1wgl_A	59	TOLL-interacting protein; CUE domain, structural g	90.18
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	89.58
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	89.55
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	89.5
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	89.44
2cp8_A	54	NEXT to BRCA1 gene 1 protein; UBA domain, structur	89.34
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	89.33
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	89.32
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	89.3
2ooa_A	52	E3 ubiquitin-protein ligase CBL-B; alpha-helical d	89.26
1aip_C	196	EF-TS, elongation factor TS; nucleotide exchange,	89.25
2d9s_A	53	CBL E3 ubiquitin protein ligase; UBA domain, dimer	89.23
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	89.09
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	89.07
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	89.07
2zc2_A	78	DNAD-like replication protein; GI 24377835, struct	88.94
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	88.91
4ae4_A	118	Ubiquitin-associated protein 1; protein transport,	88.75
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	88.7
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	88.67
1otr_A	49	Protein CUE2; protein-protein complex, cell cycle;	88.55
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	88.42
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	88.26
1oqy_A	368	HHR23A, UV excision repair protein RAD23 homolog A	88.13
2dna_A	67	Unnamed protein product; ubiquitin associated doma	88.12
2jq6_A	139	EH domain-containing protein 1; metal binding prot	88.11
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	88.1
1vdl_A	80	Ubiquitin carboxyl-terminal hydrolase 25; UBA doma	87.81
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	87.75
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	87.69
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	87.65
1xb2_B	291	EF-TS, elongation factor TS, mitochondrial, EF-TSM	87.64
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	87.57
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	87.36
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	87.36
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	87.24
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	87.22
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	87.18
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	87.18
2hps_A	186	Coelenterazine-binding protein with bound coelent;	86.86
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	86.85
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	86.74
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	86.58
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	85.88
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	85.66
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	85.57
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	85.41
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	85.13
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	84.55
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	84.49
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	84.38
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	84.24
2crn_A	64	Ubash3A protein; compact three-helix bundle, struc	83.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	83.87
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	83.78
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	83.77
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	83.62
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	83.09
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	82.66
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	82.06
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	81.93
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	81.84
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	81.56
2dhy_A	67	CUE domain-containing protein 1; structural genomi	81.46
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	81.1
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	80.85
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	80.64
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	80.19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	80.17
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	80.04

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}

Probab=100.00  E-value=1.9e-35  Score=231.97  Aligned_cols=97  Identities=39%  Similarity=0.775  Sum_probs=93.1

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~  132 (150)
                      +++.++|++||++|+||+++.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus         3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~   82 (199)
T 3kev_A            3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR   82 (199)
T ss_dssp             -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence            56899999999999999767999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCccccC
Q 031969          133 RISFMRAELKDERTCTG  149 (150)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~  149 (150)
                      +|++|+++|+|+.+||+
T Consensus        83 ~l~~l~~~l~d~~~Fk~   99 (199)
T 3kev_A           83 KLSSLRKEIEDPSKFRA   99 (199)
T ss_dssp             HHHHHHHHTTSHHHHHH
T ss_pred             HHHHHHHHccCHHHHHH
Confidence            99999999999999984

>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.6e-35  Score=232.72  Aligned_cols=97  Identities=38%  Similarity=0.722  Sum_probs=90.9

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~  132 (150)
                      +++.++|++||++|+|+++|.||++|+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus         2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk~   81 (221)
T 4gba_A            2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICA   81 (221)
T ss_dssp             ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHHH
Confidence            45778999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCccccC
Q 031969          133 RISFMRAELKDERTCTG  149 (150)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~  149 (150)
                      +|+.|+++|+|+.+||+
T Consensus        82 ~l~~L~~~l~d~~~Fk~   98 (221)
T 4gba_A           82 RFPSLLTEAKQEDKFKD   98 (221)
T ss_dssp             HHHHHHHHTTSHHHHHH
T ss_pred             HHHHHHHHccCHHHHHH
Confidence            99999999988899984

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=100.00  E-value=5.5e-35  Score=229.44  Aligned_cols=95  Identities=46%  Similarity=0.877  Sum_probs=91.5

Q ss_pred             CHHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHH
Q 031969           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER  133 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~  133 (150)
                      +.++|++||++|+||+ +|.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||++
T Consensus         2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~   81 (200)
T 3tdu_A            2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ   81 (200)
T ss_dssp             CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence            5789999999999986 489999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCccccC
Q 031969          134 ISFMRAELKDERTCTG  149 (150)
Q Consensus       134 l~~l~~~l~~~~~Fk~  149 (150)
                      |++|+++|+|+.+||+
T Consensus        82 l~~l~~~l~d~~~Fk~   97 (200)
T 3tdu_A           82 IPKMEQELKEPGRFKD   97 (200)
T ss_dssp             HHHHHHHTTSHHHHHH
T ss_pred             HHHHHHHccCHHHHHH
Confidence            9999999999999984

>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=4.4e-15  Score=97.67  Aligned_cols=52  Identities=23%  Similarity=0.436  Sum_probs=47.6

Q ss_pred             CCCCCcchHHHHHHHHHHhC-CCHHHHHHHHHhCCCCchhhhhhhhccCCCCC
Q 031969            1 MHKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKS   52 (150)
Q Consensus         1 m~~l~~~~~~~i~~F~~iT~-~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~   52 (150)
                      |++|+++++++|.+|++||| +++.+|++||+.++|||+.||+.||+...+.+
T Consensus        11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~~p   63 (67)
T 2dam_A           11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGSG   63 (67)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCSSC
T ss_pred             hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence            56899999999999999999 89999999999999999999999998865433

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=4e-14  Score=91.68  Aligned_cols=48  Identities=35%  Similarity=0.405  Sum_probs=44.8

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~   50 (150)
                      .|++.++++|.+|++|||+++.+|++||+.++|||+.||+.||+.+..
T Consensus        10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~   57 (62)
T 2dal_A           10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS   57 (62)
T ss_dssp             SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred             hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            578889999999999999999999999999999999999999988643

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3

Probab=99.47  E-value=4.7e-14  Score=85.68  Aligned_cols=43  Identities=35%  Similarity=0.618  Sum_probs=40.2

Q ss_pred             cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      +.++++|.+|++|||+++.+|++||+.++|||+.||+.||+++
T Consensus         3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~   45 (46)
T 1v92_A            3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence            3578899999999999999999999999999999999999875

>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}

Probab=99.41  E-value=1.1e-13  Score=84.29  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=37.2

Q ss_pred             CcchHHHHHHHHHHhCCCH-HHHHHHHHhCCCCchhhhhhhhc
Q 031969            5 SRSNRDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         5 ~~~~~~~i~~F~~iT~~~~-~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      +.++.++|.+|+++||+++ ..|++||++|||||+.|++.||.
T Consensus         2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~   44 (45)
T 3e21_A            2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP   44 (45)
T ss_dssp             -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred             cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence            4578999999999999996 99999999999999999999984

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.1e-12  Score=84.62  Aligned_cols=40  Identities=30%  Similarity=0.578  Sum_probs=38.3

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      ++|.+|++|||+++.+|++||+.++|||+.||+.||+++.
T Consensus        19 ~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~   58 (66)
T 2dzl_A           19 VMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN   58 (66)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999999998864

>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A

Probab=98.41  E-value=3.9e-07  Score=57.76  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=42.5

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      +||+.|+++|.+|+..||.+..-+..||+.++||++.|+..|-+.
T Consensus         1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~   45 (57)
T 2jp7_A            1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS   45 (57)
T ss_dssp             CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            488999999999999999999999999999999999999999663

>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3

Probab=98.36  E-value=5.1e-07  Score=57.55  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=41.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      -||+.|+++|.+|+..||.+..-+..+|+.++||++.|+..|-+
T Consensus         2 ~ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~   45 (59)
T 1oai_A            2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH   45 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999965

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=98.26  E-value=4.3e-07  Score=75.50  Aligned_cols=42  Identities=40%  Similarity=0.677  Sum_probs=38.7

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ...+++++|.+|||++++.|..||+.++|+|+.|++.||+..
T Consensus        44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~   85 (362)
T 4gew_A           44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSE   85 (362)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred             chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence            456789999999999999999999999999999999999543

>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1

Probab=97.87  E-value=1.9e-05  Score=45.65  Aligned_cols=39  Identities=31%  Similarity=0.319  Sum_probs=34.6

Q ss_pred             cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      +...+.|++++++ |.++..|++.|+.++||++.|++-.|
T Consensus         2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~   40 (40)
T 1z96_A            2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL   40 (40)
T ss_dssp             -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred             chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence            4557789999998 99999999999999999999998654

>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1

Probab=97.65  E-value=4.9e-05  Score=53.46  Aligned_cols=42  Identities=21%  Similarity=0.381  Sum_probs=38.9

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .-.+.|+.++++||+++..|+..|..++|+++.||+..++..
T Consensus        38 d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~   79 (104)
T 1wj7_A           38 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN   79 (104)
T ss_dssp             HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            346789999999999999999999999999999999999875

>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A

Probab=97.14  E-value=6.5e-05  Score=60.00  Aligned_cols=45  Identities=20%  Similarity=0.377  Sum_probs=0.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      .++..|+++|.+|+..||.+.+-+..||+.++||++.|+..|-+-
T Consensus       193 ~~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l  237 (250)
T 1jkg_B          193 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHL  237 (250)
T ss_dssp             ---------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            356677889999999999999999999999999999999999653

>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}

Probab=97.00  E-value=0.0013  Score=42.40  Aligned_cols=41  Identities=27%  Similarity=0.400  Sum_probs=36.9

Q ss_pred             CcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         5 ~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      +-+....+..|+.-||+.+-.|+.+|+--||+|.+|++.|=
T Consensus        14 t~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e   54 (73)
T 2l2d_A           14 TLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE   54 (73)
T ss_dssp             SCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence            34556788999999999999999999999999999999984

>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=96.83  E-value=0.0019  Score=39.18  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=36.2

Q ss_pred             cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      +...+.|++.+++ |-++..|+..|++++||++.|++-.|+.
T Consensus         6 ~~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g   46 (49)
T 1ify_A            6 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG   46 (49)
T ss_dssp             HHHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence            3456789999987 8999999999999999999999988764

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=96.82  E-value=0.0027  Score=38.91  Aligned_cols=68  Identities=12%  Similarity=0.048  Sum_probs=54.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+.++|..|-......|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.++|+..|..
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            35678999998884333369999999999999999887766666666677677799999999988754

>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=96.66  E-value=0.002  Score=37.75  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=34.5

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ..+.|++.+++ |-++..|++.|..++||++.|++-.|++
T Consensus         4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~   42 (43)
T 2g3q_A            4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence            45789999995 9999999999999999999999887654

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=96.64  E-value=0.0078  Score=36.18  Aligned_cols=64  Identities=6%  Similarity=0.078  Sum_probs=51.8

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .+.++|..|-......|+.+-+.+.+..+|..+..-.+-.+-..+....-|.|+.+||+..|..
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4678898885433469999999999999999887766666666777777899999999998865

>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A

Probab=96.64  E-value=0.00058  Score=41.21  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=37.2

Q ss_pred             CcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         5 ~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ++..+++|.+.+++ |-++..|++.|.+++||.+.|++-.|++.
T Consensus         1 ~~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~   43 (47)
T 1dv0_A            1 GSQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN   43 (47)
T ss_dssp             --CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred             CcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence            35667889999887 99999999999999999999999998764

>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=96.61  E-value=0.0029  Score=41.62  Aligned_cols=44  Identities=25%  Similarity=0.343  Sum_probs=38.5

Q ss_pred             CCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         4 l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+...+.|++++++ |-++..|+..|++++||++.|++-.|++.
T Consensus        25 ~~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~   68 (73)
T 1vg5_A           25 RVAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CSCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             CCcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            345567889999995 89999999999999999999999998764

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=96.57  E-value=0.023  Score=38.85  Aligned_cols=65  Identities=12%  Similarity=0.137  Sum_probs=43.0

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhh---cccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM---KAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l---~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .++.++|..|-......|+.+-+..++..+|+.|....+-.+...+   .... |.|+.++|+..|...
T Consensus         8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~   75 (149)
T 2mys_C            8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA   75 (149)
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence            4566677766433335777777777777777777665555555555   5555 777777777777664

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=96.48  E-value=0.017  Score=37.19  Aligned_cols=66  Identities=8%  Similarity=0.046  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+...+..+|+.+..-.+-.+-..+....-|.|+.++|+..|..
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            467888999994333369999999999999999987766666666777777899999999998875

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=96.43  E-value=0.027  Score=36.21  Aligned_cols=71  Identities=10%  Similarity=0.058  Sum_probs=56.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      ....+..+|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..|....-.
T Consensus         7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~   77 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGG   77 (92)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCC
Confidence            35678999999954334699999999999999998876666666666777777999999999999886543

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=96.41  E-value=0.01  Score=36.62  Aligned_cols=68  Identities=10%  Similarity=0.081  Sum_probs=52.3

Q ss_pred             CHHHHHHHHHHhcCCC-C-CccchHHHHHHHhhcCCCC--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPY-L-DMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~-~-d~I~~dG~~~~~edLgv~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+..+|..|.|.+ . ..|+.+-+...+..+|..+  ..-.+-.+...+....-|.|+.++|+.-|..+
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            3578999999994433 3 5899999999999999776  54444445555666667999999999988764

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=96.36  E-value=0.015  Score=36.00  Aligned_cols=66  Identities=9%  Similarity=0.112  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+.+..+|+.+..-.+-.+-..+....-|.|+.++|+..|..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467888999984333469999999999999999987766666666777777899999999988764

>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=96.35  E-value=0.0048  Score=41.58  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=36.4

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+.|++++++ |-++..|+..|++++||++.|++-.|.++
T Consensus        29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~   68 (83)
T 1veg_A           29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG   68 (83)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            46789999997 99999999999999999999999999753

>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B

Probab=96.33  E-value=0.0046  Score=37.86  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+.|.+.+++ |- ++..++..|++++||++.|++-.|.++
T Consensus        13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~   52 (52)
T 2jy5_A           13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS   52 (52)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence            4788999987 77 899999999999999999999887653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=96.22  E-value=0.039  Score=38.37  Aligned_cols=67  Identities=7%  Similarity=-0.004  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|-... ...|+.+-+..++..+|+.+....+--+-..+....-|.|+.+||+..+...
T Consensus        17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~   84 (161)
T 1dtl_A           17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS   84 (161)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            456777777775434 4578888888888888887776666556666666667888888888877764

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=96.20  E-value=0.061  Score=34.03  Aligned_cols=74  Identities=9%  Similarity=-0.029  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk  131 (150)
                      ..++..+|..|-......|+.+-+.+.+..+| .+..-.+-.+-..+....-|.|+.++|+..+.... .-++.++
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~-~~~~~~~   83 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR-GLVKDVS   83 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT-TTHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc-cHHHHHH
Confidence            57788899999543346999999999999999 77666666666667777789999999999998753 2344443

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=96.11  E-value=0.043  Score=36.07  Aligned_cols=67  Identities=9%  Similarity=0.035  Sum_probs=54.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      .....+.++|..|-......|+.+-+.+.+..+|..+.+-.+--+...+....-|.|+.+||+..|.
T Consensus        26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3568899999999543346999999999999999988766665666666667779999999998775

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=96.07  E-value=0.019  Score=36.11  Aligned_cols=69  Identities=9%  Similarity=0.028  Sum_probs=54.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ....+. +|..|-......|+.+-+...+..+| ..+..-.+-.+...+....-|.|+.++|+..|....+
T Consensus         7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   76 (81)
T 1c7v_A            7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN   76 (81)
T ss_dssp             CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred             HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence            467888 99999543336999999999999999 8877666666666777777899999999999887544

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.05  E-value=0.07  Score=36.32  Aligned_cols=65  Identities=11%  Similarity=0.160  Sum_probs=35.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.++|..|-......|+.+-+..++..+|+.|....+-.+...+....-|.|+.++|+..+..
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   70 (142)
T 2bl0_C            6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR   70 (142)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHH
Confidence            44555666653222246666666666666666665544444444444445566666666665554

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=96.04  E-value=0.065  Score=37.13  Aligned_cols=66  Identities=6%  Similarity=0.019  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus        22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   87 (161)
T 3fwb_A           22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGE   87 (161)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHH
Confidence            456777777774333468999999999988998887777666667777777788888888888765

>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}

Probab=96.03  E-value=0.0066  Score=37.26  Aligned_cols=39  Identities=28%  Similarity=0.410  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+.|.+.+++ |- ++..|+..|++++||++.|++-.|+.+
T Consensus        12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~   51 (53)
T 2knz_A           12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ   51 (53)
T ss_dssp             HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            4568888887 66 899999999999999999999988764

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=96.00  E-value=0.1  Score=36.44  Aligned_cols=120  Identities=8%  Similarity=0.095  Sum_probs=79.1

Q ss_pred             CCCCCcchHHHHH-HHHHH-hCC----CHHHHHHHHHhCCCCchh-hhhhhhc----cCCC---------------CCcC
Q 031969            1 MHKLSRSNRDKLQ-QFVSI-TGA----SEKAALQALKASDWHLEG-AFDVFYS----QPQS---------------KSLT   54 (150)
Q Consensus         1 m~~l~~~~~~~i~-~F~~i-T~~----~~~~A~~~L~~~~w~le~-Ai~~f~~----~~~~---------------~~~~   54 (150)
                      |..||..|.+.++ -|..+ ++-    +...-..+|+..++++.. -+...+.    +..+               ....
T Consensus         1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (148)
T 2lmt_A            1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD   80 (148)
T ss_dssp             CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence            7788887766654 45554 211    334455677777776532 2333321    1111               1233


Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ....|...|..|=......|+.+-+.+.+..+|..+.+..+-.+...+-...=|.|+-+||++-|.
T Consensus        81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~  146 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS  146 (148)
T ss_dssp             THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            457788999998543446999999999999999988776666666666666779999999998664

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=96.00  E-value=0.031  Score=38.12  Aligned_cols=66  Identities=9%  Similarity=0.153  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus        10 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~   75 (147)
T 4ds7_A           10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSR   75 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence            355666677664333357777777777777777776666555556666666677777777776654

>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.95  E-value=0.011  Score=39.85  Aligned_cols=39  Identities=21%  Similarity=0.383  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+.|++++++ |.++..|++.|..++||++.|++-.|+..
T Consensus        22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~   60 (85)
T 2dkl_A           22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK   60 (85)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence            6779999995 99999999999999999999999988764

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.91  E-value=0.01  Score=37.59  Aligned_cols=40  Identities=38%  Similarity=0.500  Sum_probs=35.5

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ...+.|++++++ |-++..|++.|+.++||++.|++-.|++
T Consensus         8 ~~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~   47 (63)
T 2dak_A            8 PPEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSH   47 (63)
T ss_dssp             CCHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence            346789999995 9999999999999999999999988865

>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.86  E-value=0.0078  Score=37.21  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHhCCCH-HHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~-~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      .+.|.+++++ |-++ ..+++.|++++||++.||+-.|..+.
T Consensus        10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~   50 (54)
T 2dah_A           10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG   50 (54)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            5678999887 8865 55799999999999999999997654

>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2

Probab=95.80  E-value=0.0091  Score=38.33  Aligned_cols=37  Identities=22%  Similarity=0.088  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      .+.|+++++.||++-..|+..|+.++||++.|+.-.-
T Consensus        10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr   46 (64)
T 2cp9_A           10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH   46 (64)
T ss_dssp             CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            3679999999999999999999999999999998664

>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=95.78  E-value=0.014  Score=38.25  Aligned_cols=41  Identities=29%  Similarity=0.400  Sum_probs=36.2

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ...+.|++.+++ |-++..|++.|+.++||++.|++-.|+++
T Consensus        28 ~~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~   68 (73)
T 1wiv_A           28 IDQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNS   68 (73)
T ss_dssp             SCHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            346789999986 99999999999999999999999988765

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=95.76  E-value=0.046  Score=34.67  Aligned_cols=65  Identities=6%  Similarity=-0.013  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH---HHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV---MLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~---~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+...+..+|+.+....   +-.+...+....-|.|+. +|+..+..
T Consensus        13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A           13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            567889999995433469999999999999999987766   555555555556799999 99998865

>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.75  E-value=0.013  Score=37.37  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=35.5

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+.|++.+++ |-++..|+..|..++||++.|++-.|++.
T Consensus         9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~   48 (63)
T 1wji_A            9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            46788999884 99999999999999999999999988664

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=95.73  E-value=0.036  Score=34.46  Aligned_cols=65  Identities=12%  Similarity=0.054  Sum_probs=51.2

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .++..+|..|-......|+.+-+..++..+| .+.+-.+-.+-..+....-|.|+.++|+..+...
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            5688899999543346999999999999999 6665555555556666777999999999988774

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=95.71  E-value=0.055  Score=36.99  Aligned_cols=67  Identities=9%  Similarity=0.131  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~   76 (153)
T 3ox6_A           10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPK   76 (153)
T ss_dssp             HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHH
Confidence            4667788888743334699999999999999999988887777777777778999999999998653

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=95.69  E-value=0.044  Score=38.07  Aligned_cols=67  Identities=9%  Similarity=0.046  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHhc-CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~-d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|- ......|+.+-+.+++..+|+.|....+-.+...+....-|.|+.++|+..+...
T Consensus        12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   79 (158)
T 2jnf_A           12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARF   79 (158)
T ss_dssp             HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            467888898886 4444699999999999999999987777777777777778999999999999764

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=95.69  E-value=0.067  Score=35.12  Aligned_cols=66  Identities=17%  Similarity=0.131  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|.++|.+|-+.++  ..|+.+-+.+++..     ||..+.+..+--+-..+-...=|.|+-+||+..|..+
T Consensus         9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l   81 (92)
T 3rm1_A            9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI   81 (92)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            567889999985433  49999999999999     9988776666666666667777999999999988774

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=95.66  E-value=0.036  Score=34.82  Aligned_cols=67  Identities=10%  Similarity=0.059  Sum_probs=47.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC--CCC--CcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ--VDP--QDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg--v~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...++..+|..|-......|+.+-+..++..+|  ..+  +.+..++  +-..+....-|.|+.+||+..+..
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~   77 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE   77 (83)
T ss_dssp             SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence            346789999999543346999999999999999  544  4443321  223334455699999999976654

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=95.61  E-value=0.066  Score=37.11  Aligned_cols=68  Identities=6%  Similarity=0.034  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-+..++
T Consensus        95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~  162 (162)
T 1top_A           95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGVQ  162 (162)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhcC
Confidence            45577788888543346899999999999999776655555555556666678999999998887653

>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.59  E-value=0.014  Score=37.22  Aligned_cols=47  Identities=26%  Similarity=0.376  Sum_probs=41.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~   50 (150)
                      .|++.+.+.|...++ .|-++.+|++.|++.+-|+|.|++=-|.++.+
T Consensus        14 ~ls~se~e~V~~Lvs-MGFs~~qA~kALKat~~NvErAaDWLFSH~D~   60 (63)
T 1wgn_A           14 MLSPSERQCVETVVN-MGYSYECVLRAMKKKGENIEQILDYLFAHSGP   60 (63)
T ss_dssp             TCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHCSCHHHHHHHHHHHSCC
T ss_pred             hhCcchHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence            478889999999986 57999999999999999999999999987643

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=95.58  E-value=0.061  Score=38.73  Aligned_cols=67  Identities=10%  Similarity=0.061  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCC-CccchHHHHHHHhhc----CCCCCcHHHHHHH-----------HhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDL----QVDPQDIVMLVVS-----------WHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edL----gv~ped~~~LvLa-----------~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ..++.++|+.|.|.++ ..|+.+-+...+..+    |..+.+..+-.+.           ..+....-|.|+.+||+..|
T Consensus        11 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   90 (191)
T 2ccm_A           11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMW   90 (191)
T ss_dssp             HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHH
Confidence            5779999999944444 599999999999999    9988766554444           55666677999999999998


Q ss_pred             HHc
Q 031969          120 QSL  122 (150)
Q Consensus       120 ~~l  122 (150)
                      ..+
T Consensus        91 ~~~   93 (191)
T 2ccm_A           91 AEC   93 (191)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=95.55  E-value=0.0066  Score=36.59  Aligned_cols=63  Identities=11%  Similarity=0.114  Sum_probs=48.6

Q ss_pred             HHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        60 ~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .++|..|-......|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..|..+
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~   65 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI   65 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            467888754344699999999999999977665555555566667778999999999988764

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=95.53  E-value=0.065  Score=37.62  Aligned_cols=66  Identities=9%  Similarity=0.154  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+-..+....-|.|+.+||+..+..
T Consensus        27 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   92 (169)
T 3qrx_A           27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA   92 (169)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            456777777774433458888888888888888887776666666666667788888888887765

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=95.47  E-value=0.061  Score=36.28  Aligned_cols=64  Identities=13%  Similarity=0.161  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ...|.+.|+.|=......|+.+-+...+..||+.+.+-.+-.+-..+....-|.|+-+||+.-|
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            4678889999844334699999999999999999877766667777777788999999999754

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=95.45  E-value=0.057  Score=39.60  Aligned_cols=67  Identities=9%  Similarity=0.018  Sum_probs=48.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+.++|..|-......|+.+-+...+..+|+.+. ..+-.+...+....-|.|+.+||+..+...
T Consensus        50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~  116 (191)
T 3k21_A           50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDR  116 (191)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh
Confidence            3467888888884433468999999999999998876 444445555666667888888888887443

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=95.40  E-value=0.068  Score=35.18  Aligned_cols=72  Identities=10%  Similarity=0.085  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL  127 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi  127 (150)
                      ...|..+|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..+......+.
T Consensus        23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   94 (105)
T 1wlz_A           23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATP   94 (105)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccCCCCc
Confidence            567888999984333469999999999999999887666555555555556799999999998887554443

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=95.39  E-value=0.14  Score=33.54  Aligned_cols=66  Identities=9%  Similarity=0.034  Sum_probs=51.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            46789999999943334699999999999999   7777666555555566666779999999998765

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=95.36  E-value=0.083  Score=36.54  Aligned_cols=66  Identities=12%  Similarity=0.151  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus        95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            466778888884333368999999999999988877666666666666667788999999887754

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=95.36  E-value=0.077  Score=37.11  Aligned_cols=65  Identities=12%  Similarity=0.122  Sum_probs=42.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.++|..|-......|+.+-+..++..+|..+....+-.+...+....-|.|+.++|+..+..
T Consensus        27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~   91 (166)
T 2aao_A           27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLH   91 (166)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            45666777764333357777777777777777776655555555566666677777777776643

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=95.32  E-value=0.09  Score=37.31  Aligned_cols=66  Identities=11%  Similarity=0.124  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+..++..+|+.|....+-.+...+....-|.|+.+||+..+..
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~   75 (179)
T 2f2o_A           10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   75 (179)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHH
Confidence            456667777664333357777777777777777776655555555555555677777777766544

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=95.29  E-value=0.079  Score=37.24  Aligned_cols=69  Identities=9%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHH----HHhhcCCCCCcHHHH-----------HHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITL----LCNDLQVDPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~----~~edLgv~ped~~~L-----------vLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..++.++|+.|-......|+.+-+..    ++..+|+.|....+-           .+...+....-|.|+.+||+..+.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~   85 (176)
T 1nya_A            6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE   85 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            46788999998433346999999998    789999999776654           344555666679999999999998


Q ss_pred             HcCC
Q 031969          121 SLGI  124 (150)
Q Consensus       121 ~l~~  124 (150)
                      ....
T Consensus        86 ~~~~   89 (176)
T 1nya_A           86 NLIF   89 (176)
T ss_dssp             HHHS
T ss_pred             HHhc
Confidence            8644

>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=95.29  E-value=0.038  Score=36.32  Aligned_cols=40  Identities=25%  Similarity=0.441  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      .+.|++++++ |- ++..+++.|+.++||++.||+-.|..+.
T Consensus        30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~   70 (74)
T 1vej_A           30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG   70 (74)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            5678999987 76 5788899999999999999999998753

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=95.28  E-value=0.3  Score=32.02  Aligned_cols=68  Identities=9%  Similarity=0.058  Sum_probs=53.6

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|..|-......|+.+-+.+.+..+   |..+.+..+--+-..+....-|.|+.+||+.-|++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            357889999999954334699999999999999   88876665555555666667799999999988765

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=95.22  E-value=0.083  Score=34.26  Aligned_cols=65  Identities=20%  Similarity=0.272  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-......|+.+-+..++..+|++.+.+..  +-..+....-|.|+.+||+..|..+
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~--~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHH--HHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            4678889999865444699999999999999976554433  3334555667999999999988763

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=95.22  E-value=0.095  Score=36.24  Aligned_cols=64  Identities=11%  Similarity=0.129  Sum_probs=36.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+.++|..|-......|+.+-+...+..+|..|....+-.+...+....-|.|+.++|+..|.
T Consensus        10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~   73 (148)
T 1exr_A           10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA   73 (148)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4455566655332234677777777777777766555544444445455556666666665554

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=95.19  E-value=0.16  Score=34.46  Aligned_cols=100  Identities=10%  Similarity=0.061  Sum_probs=69.1

Q ss_pred             CHHHHHHHHHhCCCCc-hhhhhhhhccCCC---------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969           22 SEKAALQALKASDWHL-EGAFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND   85 (150)
Q Consensus        22 ~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~~---------------~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed   85 (150)
                      +...-..+|...+.++ +..+...+....+               ........+..+|..|-......|+.+-+.+++..
T Consensus        25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~  104 (143)
T 3j04_B           25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT  104 (143)
T ss_dssp             CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence            5566667777776665 2334444433211               11234677888888884333468999999999999


Q ss_pred             cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        86 Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +|..+.+-.+-.+...+....-|.|+.+||+..|+.
T Consensus       105 ~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B          105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             SSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            998887766666666666677799999999998865

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=95.18  E-value=0.25  Score=32.43  Aligned_cols=67  Identities=6%  Similarity=0.033  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      .....+..+|..|-......|+.+-+.+.+..+   |..+.+-.+-.+-..+....-|.|+.+||+.-|+
T Consensus        39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            357889999999954334699999999999999   7777655555555555666679999999998765

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=95.17  E-value=0.26  Score=32.32  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=53.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.++|+..|+.
T Consensus        39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            356889999999854344699999999999999   77776665555556666677799999999987764

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=95.16  E-value=0.058  Score=34.28  Aligned_cols=66  Identities=15%  Similarity=0.141  Sum_probs=51.9

Q ss_pred             HHHHHHHHHhcC-CCCC-ccchHHHHHHHhh---cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKD-PYLD-MILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~ed---Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-. .... .|+.+-+...+..   +|..+....+-.+...+....-|.|+.+||+..|..+
T Consensus        10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A           10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            578889999963 3445 9999999999997   9987766555555556666677999999999988764

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=95.16  E-value=0.065  Score=35.71  Aligned_cols=68  Identities=12%  Similarity=0.083  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...+..+|..|-......|+.+-+...+..+|..+..-.+-.+...+....-|.|+.++|+.-|....
T Consensus        31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~   98 (107)
T 2d58_A           31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR   98 (107)
T ss_dssp             HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence            45678888888433336999999999999999998776666666667777779999999999887654

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=95.15  E-value=0.058  Score=37.44  Aligned_cols=65  Identities=12%  Similarity=0.189  Sum_probs=33.8

Q ss_pred             HHHHHHHHHhcC--CCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKD--PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d--~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+.++|..|-.  .....|+.+-+...+..+|+.|....+-.| ..+....-|.|+.++|+..+...
T Consensus         9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~   75 (156)
T 1wdc_C            9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGL   75 (156)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHH
Confidence            345555555532  233456666666666666666554443333 33333444556666666555543

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=95.15  E-value=0.07  Score=34.23  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHhc-CCCCC-ccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~-d~~~d-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|- ..... .|+.+-+..++..     +|..+.+-.+--+...+....-|.|+.+||+..|..+
T Consensus         8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A            8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            467888999995 23345 9999999999998     9988766665555556666677999999999988764

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=95.14  E-value=0.074  Score=36.84  Aligned_cols=64  Identities=9%  Similarity=0.172  Sum_probs=36.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..|.++|+.|-......|+.+-+...+..+|+.|....+--+...+....-|.|+.++|+..|.
T Consensus         6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (143)
T 2obh_A            6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT   69 (143)
T ss_dssp             HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHH
Confidence            4455666666332234666666666666677666555444444444444556666666665554

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=95.02  E-value=0.22  Score=35.17  Aligned_cols=66  Identities=12%  Similarity=0.157  Sum_probs=53.2

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+....+-.+-..+....-|.|+.+||+..+..+
T Consensus        74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  139 (172)
T 2znd_A           74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL  139 (172)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            567788888854334699999999999999988776666666666777778999999999998874

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.02  E-value=0.087  Score=35.77  Aligned_cols=63  Identities=10%  Similarity=0.168  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +..+.++|..|-......|+.+-+.+++..+|+.|....+-.+...   ..-|.|+.++|+..+..
T Consensus         4 ~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~   66 (145)
T 2bl0_B            4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRK   66 (145)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTS
T ss_pred             HHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHH
Confidence            3346666666633223466777777777667666654333222222   33456666666665544

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=95.01  E-value=0.092  Score=36.07  Aligned_cols=72  Identities=13%  Similarity=0.051  Sum_probs=53.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCcHHHHHHHHh----hcccccccccHHHHHHHhHHcCCC
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      .....+..+|..|-......|+.+-+.+++.. +|..+.+-.+-.+...    +....-|.|+.+||+..+..+++.
T Consensus        72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~  148 (155)
T 3ll8_B           72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIH  148 (155)
T ss_dssp             CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGG
T ss_pred             CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCch
Confidence            34578888998884433468999999999988 6877665555444444    666677999999999999888764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=94.98  E-value=0.55  Score=32.37  Aligned_cols=100  Identities=6%  Similarity=0.044  Sum_probs=66.1

Q ss_pred             CHHHHHHHHHhCCCCc-hhhhhhhhccCCC---------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969           22 SEKAALQALKASDWHL-EGAFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND   85 (150)
Q Consensus        22 ~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~~---------------~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed   85 (150)
                      +...-..+|...+.++ +..+...+.+..+               ........+..+|..|-......|+.+-+.+++..
T Consensus        36 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~  115 (156)
T 1wdc_B           36 SKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLEN  115 (156)
T ss_dssp             CHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHH
Confidence            4555566666655554 2334444443222               11234577888888884333468999999999999


Q ss_pred             cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        86 Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +|..+.+-.+-.+...+... -|.|+.++|+..+..-
T Consensus       116 ~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_B          116 MGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  151 (156)
T ss_dssp             SSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence            99876655555555566666 8999999999988763

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=94.98  E-value=0.083  Score=36.60  Aligned_cols=47  Identities=11%  Similarity=0.053  Sum_probs=20.4

Q ss_pred             ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      .|+.+-+..++..+|+.|....+-.+...+....-|.|+.++|+..+
T Consensus        36 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~   82 (162)
T 1top_A           36 DISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM   82 (162)
T ss_dssp             EEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHH
Confidence            44444444444444444443333333333333333444444444444

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=94.91  E-value=0.13  Score=33.79  Aligned_cols=67  Identities=7%  Similarity=0.018  Sum_probs=52.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|..
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            56889999999954334699999999999999   77776655555555666667799999999988764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=94.90  E-value=0.1  Score=35.52  Aligned_cols=118  Identities=8%  Similarity=0.083  Sum_probs=78.6

Q ss_pred             CCCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCchh-hhhhhhc----cCCCC---------------C----
Q 031969            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYS----QPQSK---------------S----   52 (150)
Q Consensus         3 ~l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le~-Ai~~f~~----~~~~~---------------~----   52 (150)
                      .|++.+.+.++ -|..+    .| .+...-..+|...++.+.. .+...|.    +..+.               .    
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   83 (153)
T 3ox6_A            4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD   83 (153)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred             cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence            46666655553 45554    23 3566677778877776632 2333332    11110               0    


Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ......+..+|..|-......|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.+||+.-|+
T Consensus        84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            012467888999985434469999999999999 89888777777777777777789999999998764

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=94.86  E-value=0.28  Score=32.08  Aligned_cols=66  Identities=5%  Similarity=0.041  Sum_probs=50.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            56789999999954334689999999999999   5666655555555556666779999999998764

>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=94.76  E-value=0.036  Score=34.68  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+.|++.+++ |- ++..+++.|++++||++.||+-.|+.+
T Consensus        18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~   57 (58)
T 1wr1_B           18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD   57 (58)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            4578888887 75 577889999999999999999988754

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=94.75  E-value=0.12  Score=35.05  Aligned_cols=64  Identities=11%  Similarity=0.089  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+.-++
T Consensus        83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A           83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            356777787773323357888888888888887766555555555555 5668888888887654

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=94.74  E-value=0.21  Score=36.39  Aligned_cols=69  Identities=9%  Similarity=0.127  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..+.+.++|+.|-.. ....|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..+..++
T Consensus        20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~   89 (204)
T 1jba_A           20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL   89 (204)
T ss_dssp             HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHc
Confidence            456777888887653 245788888888888888855544444455556666668888888888877654

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=94.70  E-value=0.33  Score=33.76  Aligned_cols=66  Identities=11%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.|.++|+.|=......|+.+-+..++..+|.+|.+..+-.+...+....-|.++..+|+..+...
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   75 (148)
T 2lmt_A           10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQ   75 (148)
T ss_dssp             HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHH
Confidence            556777888743334588888888899999999887776666666666777888888888776653

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=94.68  E-value=0.35  Score=33.28  Aligned_cols=65  Identities=15%  Similarity=0.146  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+.
T Consensus        90 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  154 (158)
T 2jnf_A           90 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT  154 (158)
T ss_dssp             SSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            34455556555322224566666666666666555444444444444445556666666665543

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=94.68  E-value=0.081  Score=35.15  Aligned_cols=69  Identities=12%  Similarity=0.102  Sum_probs=34.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHh---hcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCN---DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e---dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ....+..+|..|-......|+.+-...++.   ..+..+....+-.+-..+....-|.|++++|...+..++
T Consensus        34 ~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~  105 (134)
T 1jfj_A           34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG  105 (134)
T ss_dssp             HHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhC
Confidence            345566666666432334666666666664   222222211222222233344456677777776666655

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=94.67  E-value=0.32  Score=31.86  Aligned_cols=66  Identities=8%  Similarity=0.000  Sum_probs=50.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ....+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            46789999999843334689999999999999   7776655555555566666679999999998764

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=94.67  E-value=0.16  Score=35.55  Aligned_cols=118  Identities=13%  Similarity=0.200  Sum_probs=72.6

Q ss_pred             CCcchHHHHH-HHHHH-h---C-CCHHHHHHHHHhCCCCc-hhhhhhhhcc----CCCC---------------CcCCHH
Q 031969            4 LSRSNRDKLQ-QFVSI-T---G-ASEKAALQALKASDWHL-EGAFDVFYSQ----PQSK---------------SLTDTR   57 (150)
Q Consensus         4 l~~~~~~~i~-~F~~i-T---~-~~~~~A~~~L~~~~w~l-e~Ai~~f~~~----~~~~---------------~~~~~~   57 (150)
                      ++..+.+.++ -|..+ +   | .+...-..+|...+..+ +..+...|..    ..+.               ......
T Consensus        22 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~  101 (169)
T 3qrx_A           22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE  101 (169)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHH
Confidence            4444444443 34443 1   2 25666677777777665 2333333321    1110               001245


Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+.-|+.
T Consensus       102 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          102 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            6777888884333468999999999999998776666666666666777799999999987765

>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A

Probab=94.65  E-value=0.043  Score=32.64  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      .+.|.+.+++ |- ++..+++.|++++||++.|++-.|+
T Consensus         8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~   45 (46)
T 2bwb_A            8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN   45 (46)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            4678888886 76 5677899999999999999998775

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=94.61  E-value=0.17  Score=35.86  Aligned_cols=65  Identities=9%  Similarity=0.059  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      .+++.++|..|-......|+.+-+...+..+| ..+....+-.+...+....-|.++.+||+..|.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~   71 (172)
T 2znd_A            6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK   71 (172)
T ss_dssp             CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH
T ss_pred             hhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            45566666665322234566666666666555 333333333333333444445555555555443

>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.60  E-value=0.054  Score=32.05  Aligned_cols=39  Identities=28%  Similarity=0.508  Sum_probs=34.0

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+.|.++++ .|-++..|++.|..++ |++.|++-.++++
T Consensus         9 ~~~~v~~L~~-MGF~~~~a~~AL~~~~-n~e~A~~~L~~h~   47 (47)
T 2ekk_A            9 NQQQLQQLMD-MGFTREHAMEALLNTS-TMEQATEYLLTHP   47 (47)
T ss_dssp             CHHHHHHHHH-HHCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence            4678999999 5999999999999998 9999999887653

>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.48  E-value=0.05  Score=36.43  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=35.7

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+.|.+.++ .|-++..|++.|..++||++.|++-.|+..
T Consensus        29 ~e~~i~~L~~-MGF~~~~a~~AL~~t~~nve~A~ewL~~~~   68 (83)
T 2dai_A           29 DEAALRQLTE-MGFPENRATKALQLNHMSVPQAMEWLIEHA   68 (83)
T ss_dssp             CHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            4678999999 499999999999999999999999888653

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=94.45  E-value=0.093  Score=32.23  Aligned_cols=66  Identities=12%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcC-CCCC-ccchHHHHHHHhh-cCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKD-PYLD-MILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~ed-Lgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+..+|..|-. .... .|+.+-+..++.. +|..   ++.+..  +...+....-|.|+.++|+..|..+
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            35789999999964 4445 9999999999985 8853   333333  3334555667999999999988764

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=94.39  E-value=0.041  Score=37.97  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhccc--ccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~l~  123 (150)
                      ...+.++|..|-......|+.+-+...+..+|+.|....+-.+...+...  .-|.|+.+||+..+....
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~   78 (151)
T 1w7j_B            9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA   78 (151)
T ss_dssp             --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence            35678888888543446899999999999999998766655555555545  568899999998887753

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=94.34  E-value=0.85  Score=31.70  Aligned_cols=68  Identities=3%  Similarity=-0.219  Sum_probs=51.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+....=|.|+.+||+..|...
T Consensus        93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~  160 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG  160 (166)
T ss_pred             cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence            45778889998854334689999999999999977655544444455555667999999999988763

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=94.31  E-value=0.068  Score=36.38  Aligned_cols=62  Identities=11%  Similarity=0.090  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+.++|..|-......|+.+-+...+..+|+.|....+-.+.   . ..-|.|+.+||+..+...
T Consensus         5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~   66 (140)
T 1ggw_A            5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIE---S-TLPAEVDMEQFLQVLNRP   66 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHH---T-TSCSSEEHHHHHHHHCTT
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH---h-CCCCcCcHHHHHHHHHHH
Confidence            4566677666432335677777777777777766544332222   2 444666666666665554

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=94.28  E-value=0.17  Score=34.20  Aligned_cols=68  Identities=7%  Similarity=0.025  Sum_probs=51.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        73 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            34678899999884333468999999999999998776555555555555566799999999998875

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=94.23  E-value=0.21  Score=34.43  Aligned_cols=68  Identities=7%  Similarity=0.004  Sum_probs=51.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh--hcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH--MKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~--l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...  +....-|.|+.++|+..+...
T Consensus        82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_C           82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG  151 (156)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence            45778888988843334689999999999999987665554444444  556667999999999988763

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=94.22  E-value=0.12  Score=36.94  Aligned_cols=67  Identities=15%  Similarity=0.152  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..++.++|..|-......|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..|..+
T Consensus        15 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~   91 (191)
T 1uhk_A           15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL   91 (191)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence            4678899999843334699999998     7899999998765     33334445555667999999999988764

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=94.17  E-value=0.29  Score=35.59  Aligned_cols=67  Identities=13%  Similarity=-0.006  Sum_probs=49.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+++.++|+.|-......|+.+-+...+..+|..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   91 (191)
T 1y1x_A           25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF   91 (191)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            4678888999884333458999999988887777776655555556666666788888888877754

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=94.16  E-value=0.23  Score=35.72  Aligned_cols=65  Identities=12%  Similarity=0.149  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|-......|+.+-+..++..+|++++.+.  .+-..+....-|.|+.+||+..|..+
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~~g~i~~~Ef~~~~~~~  102 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDIN--RILQALDINDRGNITYTEFMAGCYRW  102 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCCSEECHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHhc
Confidence            356667777764323357777777777777777653322  22233444455777777777766654

>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.13  E-value=0.077  Score=33.67  Aligned_cols=38  Identities=24%  Similarity=0.324  Sum_probs=34.4

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 031969           10 DKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP   48 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~~~~   48 (150)
                      +.|.+.++ .|-++..|++.|..++| |++.|++-.|+.+
T Consensus        21 ~~i~~L~~-MGF~~~~a~~AL~~t~~~nve~A~ewL~~~~   59 (64)
T 2cpw_A           21 SALDVLLS-MGFPRARAQKALASTGGRSVQTACDWLFSHS   59 (64)
T ss_dssp             CHHHHHHH-HTCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred             HHHHHHHH-cCCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence            56899998 49999999999999999 9999999998764

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=94.12  E-value=0.11  Score=36.12  Aligned_cols=68  Identities=12%  Similarity=0.031  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...+..+|..|-......|+.+-+..++..+|+ .+.+-.+-.+-..+....-|.|+.+||+.-|..+.
T Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  107 (135)
T 3h4s_E           39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS  107 (135)
T ss_dssp             HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence            467888999994333469999999999999997 66655555555566666779999999999998863

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=94.11  E-value=0.2  Score=33.53  Aligned_cols=67  Identities=13%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.++|..|-+.++  ..|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            3578889999953334  38999999999986     7777665555555555666778999999999998875

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=94.11  E-value=0.49  Score=34.30  Aligned_cols=66  Identities=2%  Similarity=-0.060  Sum_probs=52.3

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..+..+
T Consensus        93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  158 (191)
T 1y1x_A           93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV  158 (191)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence            567778888754334699999999999999988776666566666666677999999999999873

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=94.07  E-value=0.52  Score=32.82  Aligned_cols=63  Identities=6%  Similarity=-0.013  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.++|..|-......|+.+-+..++..+|+ .|....+-.+....    -|.|+.++|+..|...
T Consensus        24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~   87 (166)
T 2mys_B           24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEK   87 (166)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHH
Confidence            456777787774333358888888888888888 76543332222211    4667777777666653

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=94.06  E-value=0.15  Score=36.16  Aligned_cols=123  Identities=9%  Similarity=0.101  Sum_probs=74.4

Q ss_pred             CCCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCch-hhhhhhhcc----CCCCC---------------cCCH
Q 031969            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLE-GAFDVFYSQ----PQSKS---------------LTDT   56 (150)
Q Consensus         3 ~l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le-~Ai~~f~~~----~~~~~---------------~~~~   56 (150)
                      .|++.+.+.++ -|..+    .| .+...-..+|...++++. ..+...|..    ..+.=               ....
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~   83 (179)
T 2f2o_A            4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE   83 (179)
T ss_dssp             --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence            35665555443 45444    12 356677778888777663 334444421    11100               0123


Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+.-+...+..
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~  152 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGG  152 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC----
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCC
Confidence            457788888843334689999999999999988766555556666677777999999999998876543

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=94.02  E-value=0.044  Score=34.73  Aligned_cols=64  Identities=13%  Similarity=0.041  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ...+.++|..|-......|+.+-+.+.+..+|..+..-.+-.+...+....-|.|+.++|+..+
T Consensus        22 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3557888999854334699999999999999998877666666667777778999999998754

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=94.01  E-value=0.25  Score=37.17  Aligned_cols=66  Identities=6%  Similarity=-0.057  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|+.|-......|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        50 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~  115 (220)
T 3sjs_A           50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF  115 (220)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            356667777774433458888888888888888776666555666666666677777777777665

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=93.92  E-value=0.16  Score=34.71  Aligned_cols=67  Identities=10%  Similarity=0.130  Sum_probs=52.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus        81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            4578899999884433469999999999999998877666555555666667799999999987753

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=93.92  E-value=0.22  Score=32.94  Aligned_cols=67  Identities=13%  Similarity=0.153  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.++|..|-..++  ..|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            3578889999962233  49999999999986     6766554444444455666677999999999988763

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=93.86  E-value=0.38  Score=35.16  Aligned_cols=64  Identities=8%  Similarity=-0.019  Sum_probs=49.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....|.++|..|-......|+.+-+..++..||+.+....+-.+...+    -|.|+.++|+..|...
T Consensus        55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~  118 (196)
T 3dtp_E           55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDR  118 (196)
T ss_dssp             THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHH
Confidence            357899999998543346999999999999999998766554444433    6888888888888764

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=93.84  E-value=0.062  Score=36.85  Aligned_cols=64  Identities=6%  Similarity=0.093  Sum_probs=49.3

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhh-cccccccccHHHHHHHhHHc
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l-~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.++|..|-......|+.+-+..++..+|+.|....+-.+...+ ....-|.|+.++|+..+...
T Consensus         6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~   70 (148)
T 1m45_A            6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN   70 (148)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence            45678887543346999999999999999999877666666666 66777999999999998875

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=93.84  E-value=0.16  Score=36.32  Aligned_cols=67  Identities=15%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..++.++|+.|-......|+.+-+.     ..+..+|+.|...     .+-.+...+....-|.|+.+||+..|..+
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~   95 (195)
T 1qv0_A           19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQL   95 (195)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHH
Confidence            4678889998843334699999998     7889999998765     23334445556667999999999987653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=93.83  E-value=0.13  Score=35.57  Aligned_cols=67  Identities=7%  Similarity=0.082  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..|..+
T Consensus        94 ~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  160 (161)
T 1dtl_A           94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV  160 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence            4567778887743333588888888888888876655555555555666667889999998887653

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=93.82  E-value=0.28  Score=33.79  Aligned_cols=64  Identities=14%  Similarity=0.150  Sum_probs=44.1

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+.+.|..|-......|+.+-+.+++..+|..+.+..+--+...+....-|.|+.+||+..|.
T Consensus        79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            5677788877332335888888888888888776555544444555555668888888887653

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=93.80  E-value=0.37  Score=33.41  Aligned_cols=66  Identities=11%  Similarity=0.037  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...|.++|..|-+.++  ..|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            4678889999963333  38999999999976     777776555555555666677899999999998875

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=93.79  E-value=0.1  Score=33.97  Aligned_cols=65  Identities=14%  Similarity=0.052  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccchHHHHHHH-hhcCCCC--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKD-PYLD-MILVDGITLLC-NDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~-edLgv~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|..+|..|-. .... .|+.+-+..++ ..+|..+  +++.  -+-..+....-|.|+.+||+..|..+
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3578889999965 4445 89999999999 7888543  4442  33344555567999999999998765

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=93.62  E-value=0.32  Score=32.90  Aligned_cols=66  Identities=6%  Similarity=-0.024  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+... ....-|.|+.++|+.-|.+
T Consensus        83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            45778888888854344689999999999999977655444444444 5556699999999987754

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=93.56  E-value=0.2  Score=35.40  Aligned_cols=66  Identities=11%  Similarity=0.097  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+-..+....-|.|+.++|+..|..
T Consensus        47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~  112 (147)
T 1wy9_A           47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG  112 (147)
T ss_dssp             HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            456778888874333369999999999999999987766666666666677799999999998865

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=93.49  E-value=0.25  Score=35.01  Aligned_cols=67  Identities=12%  Similarity=0.101  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..|...
T Consensus        49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~  115 (150)
T 2jjz_A           49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK  115 (150)
T ss_dssp             HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            5678888888843333699999999999999998876665555556666677999999999998764

>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A

Probab=93.45  E-value=0.07  Score=37.50  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      .+.|++.+++=-.++..+++.|..++||++.||+..|+.+.
T Consensus        67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~  107 (108)
T 2cwb_A           67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA  107 (108)
T ss_dssp             HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence            56788888754346789999999999999999999997653

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=93.38  E-value=0.97  Score=32.04  Aligned_cols=109  Identities=10%  Similarity=0.027  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCc-----hhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHH
Q 031969            9 RDKLQQFVSITGASEKAALQALKAS-----DWHL-----EGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDG   78 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~l-----e~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG   78 (150)
                      ++.++.+...|+.++..-..+.+..     +..+     ..++.....     .......+..+|..|-......|+.+-
T Consensus        10 ~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~e   84 (190)
T 1fpw_A           10 KDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP-----FGSPEDFANHLFTVFDKDNNGFIHFEE   84 (190)
T ss_dssp             THHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCT-----TSCCSHHHHHHHHTCCSSCSSEECHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcC-----CCCcHHHHHHHHHHHCCCCCCcEeHHH
Confidence            4567778777888877655554432     2222     111111111     112345688899888543446899999


Q ss_pred             HHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           79 ITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        79 ~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...++..++..+..-.+-.+-..+-...-|.|+.+||+..+..+
T Consensus        85 f~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~  128 (190)
T 1fpw_A           85 FITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV  128 (190)
T ss_dssp             HHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            99999999987655444444455566677999999999999883

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=93.38  E-value=0.63  Score=32.84  Aligned_cols=65  Identities=9%  Similarity=0.105  Sum_probs=49.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..+
T Consensus        77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~  141 (173)
T 1alv_A           77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL  141 (173)
T ss_dssp             HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence            56777888885434469999999999999999876544444444444 566999999999998863

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=93.35  E-value=0.25  Score=31.97  Aligned_cols=67  Identities=13%  Similarity=0.124  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccchHHHHHHHh-hcC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCN-DLQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~e-dLg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-+.++ . .|+.+-+..++. .+|    ..+....+--+-..+....-|.|+.+||+..|..+
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3578899999963443 5 899999999998 443    55544444444455666677999999999988764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=93.28  E-value=0.78  Score=32.16  Aligned_cols=64  Identities=5%  Similarity=0.036  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+..-.+-.+...+  ..-|.|+.+||+..+..+
T Consensus        72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  135 (167)
T 1gjy_A           72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL  135 (167)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence            5677888888543346999999999999999876544433333333  556999999999988774

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=93.26  E-value=0.21  Score=36.50  Aligned_cols=70  Identities=7%  Similarity=-0.021  Sum_probs=31.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ....+..+|..|-......|+.+-...++..+.-....-.+..+-..+-...-|.|+++||...+..+|.
T Consensus        44 ~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~  113 (188)
T 1s6i_A           44 MESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL  113 (188)
T ss_dssp             CHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC
T ss_pred             CHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC
Confidence            3455555565553322245665555555544332111111111112223334466666666666666553

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=93.25  E-value=0.25  Score=35.96  Aligned_cols=69  Identities=12%  Similarity=0.047  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCcHHHHHHHHh----hcccccccccHHHHHHHhHHcCC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ...+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+...    +....-|.|+.+||+..+...++
T Consensus       113 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~  186 (202)
T 2bec_A          113 RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDV  186 (202)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSCH
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhCc
Confidence            5678889999854334699999999999999 977655444333333    56666799999999998887643

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=93.14  E-value=0.27  Score=32.07  Aligned_cols=65  Identities=5%  Similarity=-0.005  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.+.|+.|-......|+.+-+..++..+|++.+++.-+  -..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i--~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHI--WELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHH--HHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCCCCHHHHHHHHHHH
Confidence            45677788888543346999999999999999765544332  233455567999999999998764

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=93.13  E-value=0.47  Score=33.54  Aligned_cols=64  Identities=11%  Similarity=-0.017  Sum_probs=33.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhc-C-------CCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-------VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-g-------v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +++.++|..|- .....|+.+-+...+..+ |       ..+..-.+--+...+....-|.++.+||+..|..
T Consensus         4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   75 (173)
T 1alv_A            4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN   75 (173)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            45566666664 222466666666666665 5       3333333333334444444566666666655543

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=93.12  E-value=0.23  Score=33.67  Aligned_cols=62  Identities=8%  Similarity=-0.015  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g  118 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..
T Consensus        78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~  139 (142)
T 2bl0_C           78 EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINT  139 (142)
T ss_dssp             HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHH
Confidence            344455555442211235555555555555554443333333333333 34455555555543

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=93.08  E-value=0.46  Score=32.70  Aligned_cols=69  Identities=9%  Similarity=0.026  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHH----HhhcCCCCCcHHHHHH-----------HHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLL----CNDLQVDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~----~edLgv~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+|.++|..|-......|+.+-+...    +..+|+.|....+-.+           -..+....-|.|+.+||+..+.
T Consensus         3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~   82 (166)
T 3akb_A            3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV   82 (166)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred             HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            367889999984333468999988886    5677999876554433           2455556679999999999988


Q ss_pred             HcCC
Q 031969          121 SLGI  124 (150)
Q Consensus       121 ~l~~  124 (150)
                      .+..
T Consensus        83 ~~~~   86 (166)
T 3akb_A           83 KRLR   86 (166)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            7643

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=93.04  E-value=1.1  Score=31.62  Aligned_cols=111  Identities=8%  Similarity=0.000  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhhcc--CCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHH
Q 031969           10 DKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQ--PQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~~~--~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~   82 (150)
                      +.++++...|+.++.....+.+..     +..+.  .+.|..-  ..+........+..+|..|-......|+.+-...+
T Consensus         4 ~el~~l~~~~~~s~~~i~~l~~~fd~~d~~G~i~--~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~   81 (183)
T 1s6c_A            4 EGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVN--EETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA   81 (183)
T ss_dssp             --CHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEC--HHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            446677777888877655554432     22121  1111100  00011246788899999986544468999999999


Q ss_pred             HhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        83 ~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus        82 ~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~  121 (183)
T 1s6c_A           82 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  121 (183)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            9888765543333334445556677999999999999886

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=93.03  E-value=0.56  Score=32.15  Aligned_cols=64  Identities=11%  Similarity=0.063  Sum_probs=40.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+...|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|.
T Consensus        83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A           83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            4456677666322235788888888888787665554444444455555567788888877654

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=93.01  E-value=0.36  Score=34.26  Aligned_cols=62  Identities=6%  Similarity=-0.061  Sum_probs=49.0

Q ss_pred             HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|..+
T Consensus       113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF  174 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            78888843334699999999999999988766655555566666667999999999998864

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=92.99  E-value=0.25  Score=35.69  Aligned_cols=47  Identities=13%  Similarity=0.019  Sum_probs=19.3

Q ss_pred             ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      .|+.+-+...+..+|+.+....+-.+-..+....-|.|+.+||+..+
T Consensus        53 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~   99 (204)
T 3e3r_A           53 SLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL   99 (204)
T ss_dssp             SBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHT
T ss_pred             CcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence            44444444444444444433333333333333333444444444443

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=92.98  E-value=0.41  Score=32.58  Aligned_cols=65  Identities=8%  Similarity=0.068  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|+.|-......|+.+-+..++...+++.+++.  -+-..+....-|.|+.+||+..|..+
T Consensus        13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~--~i~~~~D~d~dG~I~~~EF~~~~~~~   77 (111)
T 2kgr_A           13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLA--SIWNLSDIDQDGKLTAEEFILAMHLI   77 (111)
T ss_dssp             HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHH--HHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHH--HHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            567888999984433469999999999985554443333  23334555667999999999988764

>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1

Probab=92.91  E-value=0.051  Score=34.47  Aligned_cols=39  Identities=21%  Similarity=0.280  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhC-CCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~-~w~le~Ai~~f~~~~   48 (150)
                      .+.|.++++ .|-++..|++.|..+ +||++.|++-.|+..
T Consensus        10 ~~~v~~L~~-MGF~~~~a~~AL~~t~~~nve~A~ewLl~~~   49 (64)
T 1whc_A           10 LTALESLIE-MGFPRGRAEKALALTGNQGIEAAMDWLMEHE   49 (64)
T ss_dssp             CCHHHHHHT-TTCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence            457899998 599999999999999 799999999888754

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=92.90  E-value=0.22  Score=33.68  Aligned_cols=65  Identities=9%  Similarity=0.050  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+.. .-|.|+.+||+.-|..
T Consensus        75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~  139 (140)
T 1ggw_A           75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence            4788889988844334689999999999999987766555555566666 6789999999987753

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=92.88  E-value=0.32  Score=31.94  Aligned_cols=66  Identities=6%  Similarity=0.055  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+.++|..|-......|+.+-+..++..+|++.+++.-+  -..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i--~~~~D~d~dG~i~~~EF~~~~~~~   73 (95)
T 1c07_A            8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHI--WSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHH--HHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCcCCHHHHHHHHHHH
Confidence            357788999999543346999999999999999765443332  223455567999999999988663

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=92.85  E-value=0.16  Score=34.50  Aligned_cols=61  Identities=11%  Similarity=0.132  Sum_probs=36.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.++|..|-......|+.+-+..++..+|+.|....+-.+   +.. .-|.|+.++|+..|..
T Consensus         7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~---~~~-~~g~i~~~eF~~~~~~   67 (143)
T 3j04_B            7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGM---MSE-APGPINFTMFLTMFGE   67 (143)
T ss_dssp             HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTT---TTT-SSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHH---HHh-CCCCcCHHHHHHHHHH
Confidence            456666666633223578888888888888887754332222   111 4466666666666654

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.84  E-value=0.31  Score=32.54  Aligned_cols=65  Identities=14%  Similarity=0.053  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|+.|-......|+.+-+.+++..+|++.+.+.  -+-..+....-|.|+++||+..|..+
T Consensus        10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~--~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A           10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILG--KIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHH--HHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHH--HHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            467889999985433469999999999999997543322  22234455567999999999998764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=92.81  E-value=0.39  Score=36.06  Aligned_cols=75  Identities=9%  Similarity=-0.035  Sum_probs=53.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF  136 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~  136 (150)
                      ..+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+. ..-|.|+.+||++.|..+     ..++.....
T Consensus       117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l-----~~~~~~F~~  190 (220)
T 3sjs_A          117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA-----AQTRSAYQM  190 (220)
T ss_dssp             HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH-----HHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHH
Confidence            56777888874333469999999999999998876655555666666 666999999999998874     344444444


Q ss_pred             H
Q 031969          137 M  137 (150)
Q Consensus       137 l  137 (150)
                      +
T Consensus       191 ~  191 (220)
T 3sjs_A          191 I  191 (220)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=92.79  E-value=0.36  Score=41.47  Aligned_cols=65  Identities=11%  Similarity=0.108  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..|.++|+.|-......|+.+-+...+..||++|.+-.+--|-..+....-|.|+-+||+..+..
T Consensus       302 ~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~  366 (440)
T 3u0k_A          302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR  366 (440)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            55777888875434469999999999999999998877777777777778899999999988765

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=92.69  E-value=0.64  Score=31.95  Aligned_cols=63  Identities=6%  Similarity=-0.040  Sum_probs=46.5

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+..+|..|-......|+.+-+.+++..+|++.+.+.  .+...+....-|.|+.+||+..+..+
T Consensus        99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~--~~~~~~D~d~dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A           99 FLHAALGVADTDGDGAVTVADTARALTAFGVPEDLAR--QAAAALDTDGDGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3888898774433469999999999999994444333  33344556667999999999988764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=92.68  E-value=2  Score=30.95  Aligned_cols=112  Identities=8%  Similarity=-0.010  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhhcc--CCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969            9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQ--PQSKSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~~~--~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~   81 (150)
                      .+.+..++..+|.++.....+.+..     +..|.  .+.|..-  ...........+..+|..|-......|+.+-...
T Consensus        18 ~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~--~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~   95 (207)
T 2d8n_A           18 KEILEELQLNTKFSEEELCSWYQSFLKDCPTGRIT--QQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVI   95 (207)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEE--HHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCC--HHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHH
Confidence            4567788888888877766665542     22231  1222110  0011123567899999998654446899999999


Q ss_pred             HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        82 ~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ++..++..+..-.+-.+-..+-...-|.|+.+||+..+..+
T Consensus        96 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~  136 (207)
T 2d8n_A           96 ALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI  136 (207)
T ss_dssp             HHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            99998865543333334445566677999999999999885

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=92.67  E-value=0.32  Score=34.56  Aligned_cols=64  Identities=13%  Similarity=0.186  Sum_probs=49.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhc-ccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMK-AATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~-a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...++.++|+.+. +.+..|+.+-+..++...|++.+.   |.=-|.+- ...-|.++++||+-+|.-+
T Consensus        31 e~~~y~~iF~~lD-~~dG~Isg~elr~~~~~sgLp~~~---L~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           31 ERAKHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPV---LAQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             HHHHHHHHHHHTC-CBTTBEEHHHHHHHHGGGCCCHHH---HHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHcCCCHHH---HHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4678899999995 455799999999999999987554   33335444 4456999999999998764

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=92.60  E-value=0.69  Score=32.29  Aligned_cols=64  Identities=3%  Similarity=-0.053  Sum_probs=47.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..+
T Consensus        70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  133 (165)
T 1k94_A           70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            5678888888543346999999999999999876544333333333  566999999999998774

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=92.59  E-value=0.89  Score=31.23  Aligned_cols=62  Identities=11%  Similarity=0.162  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|-......|+.+-+..++..+|+.|....+-.+.   . ..-|.|+.++|+..|..
T Consensus        17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~   78 (156)
T 1wdc_B           17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSD   78 (156)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHHH
Confidence            35677778777433335888888888888888877654332222   1 23467777777776664

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=92.59  E-value=0.38  Score=34.35  Aligned_cols=62  Identities=8%  Similarity=0.053  Sum_probs=47.8

Q ss_pred             HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+|..|=......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..+..+
T Consensus       117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  178 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF  178 (195)
T ss_dssp             HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            78888743334699999999999999988766665556666666677999999999998875

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=92.53  E-value=0.82  Score=33.31  Aligned_cols=64  Identities=9%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+.+.|..|- .....|+.+-+...+..+    |..+.+..+-.+...+. ..-|.|+.+||+.-|..+
T Consensus        76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~  143 (174)
T 2i7a_A           76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL  143 (174)
T ss_dssp             HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH
Confidence            57888999996 444699999999999999    99886655544445555 567999999999988763

>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.52  E-value=0.12  Score=33.64  Aligned_cols=40  Identities=20%  Similarity=0.165  Sum_probs=34.7

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCC-CCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~-w~le~Ai~~f~~~~   48 (150)
                      ..+.|+++++ .|-++..|++.|..++ ||++.|++-.|+..
T Consensus         9 ~e~~v~~L~~-MGF~~~~a~~AL~~t~n~~ve~A~ewL~~~~   49 (74)
T 2dag_A            9 DESVIIQLVE-MGFPMDACRKAVYYTGNSGAEAAMNWVMSHM   49 (74)
T ss_dssp             CHHHHHHHHH-HSCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence            4678999999 5999999999999998 58999999888653

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=92.48  E-value=1.2  Score=32.33  Aligned_cols=117  Identities=8%  Similarity=-0.004  Sum_probs=74.7

Q ss_pred             CCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCch-hhhhhhhccCCC---------------CCcCCHHHHHH
Q 031969            4 LSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLE-GAFDVFYSQPQS---------------KSLTDTRHLEE   61 (150)
Q Consensus         4 l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le-~Ai~~f~~~~~~---------------~~~~~~~~l~~   61 (150)
                      |+..+...++ -|..+    .| .+...-..+|...+.++. .-+..++....+               ........+..
T Consensus        51 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~  130 (196)
T 3dtp_E           51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVN  130 (196)
T ss_dssp             SCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence            4555544443 45444    12 356666777777776652 223333332211               12234678888


Q ss_pred             HHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           62 LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        62 lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +|..|-......|+.+-+.+++ .+|..+.+-.+-.|...+....-|.|+.++|+.-|..
T Consensus       131 ~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~  189 (196)
T 3dtp_E          131 AFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK  189 (196)
T ss_dssp             HHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred             HHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence            9988843334699999999999 9998776655555555565566799999999988765

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=92.44  E-value=0.16  Score=33.75  Aligned_cols=66  Identities=8%  Similarity=0.129  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++ .|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~dg-~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A            8 METMMFTFHKFAGDKG-YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             HHHHHHHHHHHHGGGC-SBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-eECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3567888999863234 9999999999875     6666655444445555666777999999999988763

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=92.43  E-value=0.59  Score=32.58  Aligned_cols=64  Identities=13%  Similarity=-0.008  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+..+  -..+....-|.|+.+||+..|..
T Consensus        93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHH
Confidence            36788899988543446999999999999999877665433  33345566799999999998865

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=92.41  E-value=0.3  Score=35.42  Aligned_cols=67  Identities=6%  Similarity=-0.039  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..+..+|..|-...+..|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus        52 ~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~  118 (198)
T 2r2i_A           52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR  118 (198)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            3477777776443335777777777777777655433333333344455567777777777777654

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=92.40  E-value=0.37  Score=33.85  Aligned_cols=67  Identities=7%  Similarity=-0.004  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhcCCCC-CccchHHHHHHHhhcC----CCCCcHHHHHH-----------HHhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDLQ----VDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLg----v~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~  119 (150)
                      .+++..+|+.|.|.++ ..|+.+-+...+..++    ..|....+-.|           ...+....-|.|+.+||+..|
T Consensus         7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~   86 (185)
T 2sas_A            7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW   86 (185)
T ss_dssp             HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence            5778999999944333 5999999999999988    77765544333           444555667999999999998


Q ss_pred             HHc
Q 031969          120 QSL  122 (150)
Q Consensus       120 ~~l  122 (150)
                      ..+
T Consensus        87 ~~~   89 (185)
T 2sas_A           87 EKT   89 (185)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=92.34  E-value=0.55  Score=32.08  Aligned_cols=66  Identities=6%  Similarity=0.009  Sum_probs=51.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+.++|+.|-......|+.+-+..++..+|++.+++.-++  ..+....-|.|+.+||+..|...
T Consensus        20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~--~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHH--HHHcCCCCCcCcHHHHHHHHHHH
Confidence            4678999999995433469999999999999998777655432  23455667999999999988764

>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=92.22  E-value=0.18  Score=33.67  Aligned_cols=40  Identities=25%  Similarity=0.256  Sum_probs=34.7

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhC-CCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~-~w~le~Ai~~f~~~~   48 (150)
                      ..+.|.++++ .|-++..|++.|..+ |||++.|++-.|+..
T Consensus        29 ~e~~v~~L~~-MGF~~~~a~~AL~~t~n~n~e~A~ewL~~h~   69 (84)
T 1vek_A           29 NEEIVAQLVS-MGFSQLHCQKAAINTSNAGVEEAMNWLLSHM   69 (84)
T ss_dssp             CHHHHHHHHH-HTCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            4678999999 499999999999988 599999999888653

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=92.19  E-value=0.61  Score=33.02  Aligned_cols=69  Identities=12%  Similarity=0.151  Sum_probs=51.3

Q ss_pred             CHHHHHHHHHHhcC-CCCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           55 DTRHLEELYNRYKD-PYLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d-~~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      +...+.++|..|.. .....|+.+-+..++..+|.. +....+-.+-..+....-|.|+.+||+..+..++
T Consensus        16 s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~   86 (183)
T 1s6c_A           16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL   86 (183)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHc
Confidence            45667777766653 234689999999999999976 4444444555666677789999999999988653

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=92.17  E-value=0.76  Score=31.24  Aligned_cols=32  Identities=9%  Similarity=0.060  Sum_probs=19.3

Q ss_pred             ccccccHHHHHHHhHHcCCC-CHHHHHHHHHHH
Q 031969          106 TMCEFSKQEFIGGLQSLGID-SLDKFRERISFM  137 (150)
Q Consensus       106 ~~g~~tr~eF~~g~~~l~~d-si~~lk~~l~~l  137 (150)
                      .-|.||+++|...+..+|.. |.+.++..+..+
T Consensus        97 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~  129 (146)
T 2qac_A           97 CTGYLTKSQMKNILTTWGDALTDQEAIDALNAF  129 (146)
T ss_dssp             CSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence            34777777777777777643 444444444443

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=92.05  E-value=0.29  Score=32.27  Aligned_cols=67  Identities=12%  Similarity=0.055  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.++|..|-+.++ . .|+.+-+..++..     ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            3578889999963344 3 8999999999976     6766655444444444555567999999999988753

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=91.99  E-value=1.8  Score=29.97  Aligned_cols=62  Identities=10%  Similarity=0.084  Sum_probs=26.8

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +..+|..|-......|+.+-+.+++..+|++.+.+.  .+-..+....-|.|+.+||+..+..+
T Consensus       104 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~--~~~~~~D~d~dg~i~~~ef~~~~~~~  165 (176)
T 1nya_A          104 VKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA--EAFNQVDTNGNGELSLDELLTAVRDF  165 (176)
T ss_dssp             HHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            444555443222235555555555555552222221  11222233334555555555555443

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=91.95  E-value=0.71  Score=31.26  Aligned_cols=67  Identities=10%  Similarity=0.093  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++  ..|+.+-+..++..     ||..+.+-.+--+-..+-...=|.|+-+||+.-+..+
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            3578889999964333  69999999999985     4666665555455555666677999999999877654

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=91.87  E-value=0.39  Score=35.87  Aligned_cols=69  Identities=10%  Similarity=0.021  Sum_probs=52.7

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc------HHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD------IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+.|.++|..|-......|+.+-+...+..||+.|..      ..+--+...+....-|.|+.+||+..|..
T Consensus        12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~   86 (263)
T 2f33_A           12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT   86 (263)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred             cccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            3457889999999964344699999999999999887653      33334455566677899999999998753

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=91.82  E-value=0.36  Score=35.41  Aligned_cols=66  Identities=6%  Similarity=0.012  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...|.++|..|-......|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus        56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~  121 (197)
T 3pm8_A           56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID  121 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCC
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            466777888874323358999999998888888876666666666666666678888888776543

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=91.77  E-value=0.66  Score=39.75  Aligned_cols=67  Identities=10%  Similarity=0.112  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|..|-......|+.+-+..++..+|..+..-.+-.+-..+....-|.|+.+||+..|..+
T Consensus       311 i~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~  377 (450)
T 3sg6_A          311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK  377 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Confidence            3678889999843334699999999999999999877766666666777777999999999998764

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=91.74  E-value=0.22  Score=34.50  Aligned_cols=34  Identities=29%  Similarity=0.357  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~   42 (150)
                      .+.|.-.++-||+|...|++.|+.|++|+-.||-
T Consensus        66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~   99 (102)
T 1tr8_A           66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM   99 (102)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence            3568888999999999999999999999987764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=91.72  E-value=1.9  Score=32.25  Aligned_cols=112  Identities=10%  Similarity=0.057  Sum_probs=68.7

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHh-----CCCCchhh-hhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHH
Q 031969           10 DKLQQFVSITGASEKAALQALKA-----SDWHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLC   83 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~-----~~w~le~A-i~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~   83 (150)
                      +.+.+++..|+.++..-..+.+.     .+..+... +...+.. -+........+..+|..+-...+..|+.+-...++
T Consensus        37 ~~l~~l~~~~~~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l  115 (224)
T 1s1e_A           37 EGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL  115 (224)
T ss_dssp             -CHHHHHHHSSCCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            44778888888887776655543     22222110 1111111 01112457788899998854444689999999998


Q ss_pred             hhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           84 NDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        84 edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus       116 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A          116 SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             HHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             HHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence            887755433333333334455667999999999999876

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=91.62  E-value=0.55  Score=34.37  Aligned_cols=72  Identities=15%  Similarity=0.126  Sum_probs=53.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCcHHHHHH----HHhhcccccccccHHHHHHHhHHcCCCC
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVV----SWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~ped~~~LvL----a~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (150)
                      ....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+    ...+....=|.|+.+||+..+...++..
T Consensus       111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~  187 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQ  187 (208)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCGGG
T ss_pred             HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccChHH
Confidence            45678888998854334699999999999987 977655443333    3445556679999999999998876653

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=91.59  E-value=0.22  Score=36.44  Aligned_cols=65  Identities=6%  Similarity=0.123  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC--CCCcHHHHHHH-------HhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--DPQDIVMLVVS-------WHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv--~ped~~~LvLa-------~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..++.++|+.|-......|+.+-+...+..+|.  .|....+--+.       ..+....-|.|+.+||+..|.
T Consensus        35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~  108 (208)
T 2hpk_A           35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR  108 (208)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            467889999985433469999999999999998  77655544444       566666779999999999987

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=91.59  E-value=1.1  Score=34.13  Aligned_cols=108  Identities=12%  Similarity=0.049  Sum_probs=70.2

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhC-----CCCc-----hhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHH
Q 031969           10 DKLQQFVSITGASEKAALQALKAS-----DWHL-----EGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGI   79 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~-----~w~l-----e~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~   79 (150)
                      +.+.++...|+.++.....+.+..     +..+     ..++..++.     .......+..+|..+-......|+.+-.
T Consensus        77 e~l~~l~~~~~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~dG~I~~~Ef  151 (256)
T 2jul_A           77 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFP-----QGDATTYAHFLFNAFDADGNGAIHFEDF  151 (256)
T ss_dssp             THHHHHHHHTTSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCC-----SSCCHHHHHHHHHHSSCSCCSEECSHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcc-----cCCcHHHHHHHHHHhccCCCCcCcHHHH
Confidence            357888888888877766655442     2222     112222211     1234677888999885544468999999


Q ss_pred             HHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           80 TLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        80 ~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus       152 ~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~  194 (256)
T 2jul_A          152 VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI  194 (256)
T ss_dssp             HHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            9999988766543333333334555667999999999999876

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=91.57  E-value=0.73  Score=31.33  Aligned_cols=65  Identities=5%  Similarity=0.055  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      .....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..=|.|+.++|+.-|.
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            3567899999998433346899999999999999776544333333333  5569999999998764

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.51  E-value=2.7  Score=29.73  Aligned_cols=114  Identities=12%  Similarity=0.061  Sum_probs=72.2

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHh-----CCCCchhh-hhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969            8 NRDKLQQFVSITGASEKAALQALKA-----SDWHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~-----~~w~le~A-i~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~   81 (150)
                      .+..++.....|+.++..-..+.+.     .+..|... +...+..- +........+..+|..|-......|+.+-...
T Consensus         9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~   87 (193)
T 1bjf_A            9 RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFII   87 (193)
T ss_dssp             CHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            3566778888899987765554433     23323110 11111111 11122456788999998543446899999999


Q ss_pred             HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        82 ~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus        88 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~  128 (193)
T 1bjf_A           88 ALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI  128 (193)
T ss_dssp             HHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence            99998876644443344445666778999999999998774

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=91.50  E-value=0.71  Score=33.50  Aligned_cols=64  Identities=9%  Similarity=0.151  Sum_probs=40.8

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      +.|.+.|+.|=......|+.+-+...+..||++|.+..+--+...+....-|.++-.+|+..+.
T Consensus        11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~   74 (176)
T 2lhi_A           11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   74 (176)
T ss_dssp             GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHH
Confidence            5677778777332335888888888888888888766655555445444455555555555443

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=91.44  E-value=1  Score=29.63  Aligned_cols=67  Identities=10%  Similarity=0.055  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++  ..|+.+-+..++.. ||    ..+.+-.+=-+-..+-...=|.|+-+||+..+..+
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            3678889999964333  59999999999985 76    22333333333444555666999999999988764

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=91.41  E-value=0.81  Score=29.69  Aligned_cols=65  Identities=12%  Similarity=0.087  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccchHHHHHHHhh---cC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND---LQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed---Lg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++ . .|+.+-+..++..   +| ++++.+.  -+-..+....-|.|+-+||+..+..+
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~--~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A            9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSID--DLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHH--HHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3578889999973343 5 8999999999986   44 3334333  33345566667999999999988764

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=91.38  E-value=0.86  Score=32.29  Aligned_cols=65  Identities=14%  Similarity=0.110  Sum_probs=42.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+.+++.  |..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus       121 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  185 (191)
T 3khe_A          121 SRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK  185 (191)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            346677778777332335788888888877  55555444444555555556688888888877765

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=91.30  E-value=2.5  Score=29.81  Aligned_cols=118  Identities=11%  Similarity=0.083  Sum_probs=72.5

Q ss_pred             CCCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCch-hhhhhhhccCCC---------------CCcCCHHHHH
Q 031969            3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHLE-GAFDVFYSQPQS---------------KSLTDTRHLE   60 (150)
Q Consensus         3 ~l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~le-~Ai~~f~~~~~~---------------~~~~~~~~l~   60 (150)
                      +||..|.+.++ -|..+    .|. +...-...|++-+.+.. .-+..+.....+               ........|.
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~   88 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR   88 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence            46666554443 34443    233 45556667777666652 223333322211               1123467899


Q ss_pred             HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.|..|=......|+.+-+.+.+..+|..+.+-.+=-+-..+... =|.|+-++|++-|..
T Consensus        89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             HHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            999998443346999999999999999877554433333333333 599999999998764

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=91.23  E-value=0.58  Score=33.91  Aligned_cols=64  Identities=9%  Similarity=0.016  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...|.++|..|-......|+.+-+..+ ..||++|.   +--|...+....-|.|+.+||+..+....
T Consensus        28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~   91 (202)
T 2bec_A           28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFR   91 (202)
T ss_dssp             HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhc
Confidence            356777888884333468999999999 89999887   33344455566679999999999998764

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=91.23  E-value=1.8  Score=32.28  Aligned_cols=68  Identities=10%  Similarity=0.049  Sum_probs=49.9

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCC--CCCcHHHHHHH----HhhcccccccccHHHHHHHh
Q 031969           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQV--DPQDIVMLVVS----WHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv--~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~  119 (150)
                      +......|.++|+.|-......|+.+-+...+.    .||+  .|..-.+--+.    ..+....-|.|+.+||+..+
T Consensus         6 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~   83 (272)
T 2be4_A            6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI   83 (272)
T ss_dssp             CCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred             HhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            345678999999999543346999999999998    9999  76544332222    34455567999999999983

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=91.20  E-value=0.52  Score=34.25  Aligned_cols=69  Identities=10%  Similarity=0.052  Sum_probs=53.2

Q ss_pred             CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      +...+.++|..|... ....|+.+-+..++..++.. +....+--+-..+....-|.|+.+||+..+..++
T Consensus        31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~  101 (207)
T 2d8n_A           31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTT  101 (207)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHc
Confidence            567888899888643 24699999999999999886 4444444455556666779999999999998875

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.00  E-value=1  Score=31.99  Aligned_cols=73  Identities=11%  Similarity=0.052  Sum_probs=54.1

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHHcCCCC
Q 031969           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (150)
                      .+...+.++|+.|... ....|+.+-+..++..+|..+.. ..+--+-..+-...-|.|+.+||+..+..++...
T Consensus        22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~   96 (193)
T 1bjf_A           22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK   96 (193)
T ss_dssp             CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred             CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC
Confidence            3567888999988643 24599999999999999887643 2233344455666779999999999998876543

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=90.98  E-value=0.95  Score=32.19  Aligned_cols=110  Identities=15%  Similarity=0.022  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhh---ccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 031969            9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFY---SQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~---~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~   80 (150)
                      .+.+..+...++.++.....+.+..     +..+.  .+.|.   ..-. ........+..+|..+-......|+.+-..
T Consensus        10 ~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~--~~e~~~~l~~~~-~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~   86 (190)
T 2l2e_A           10 QDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLN--KSEFQKIYKQFF-PFGDPSAFAEYVFNVFDADKNGYIDFKEFI   86 (190)
T ss_dssp             HHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEEC--HHHHHHHHHHHC-CCSCHHHHHHHHHHHHCSSSTTCEEHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHhC-CCCCccHHHHHHHHHhcCCCCCeEeHHHHH
Confidence            3457777777888766655554432     22231  12221   1111 112334567788888754334588888888


Q ss_pred             HHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        81 ~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .++..++..+..-.+-.+-..+-...-|.|+.+||...+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           87 CALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             HHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence            88888877654433333334455566688888888887765

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=90.90  E-value=0.31  Score=33.29  Aligned_cols=64  Identities=6%  Similarity=-0.022  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+.-|.
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  149 (151)
T 1w7j_B           86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL  149 (151)
T ss_dssp             --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence            355677888873323368999999999999998776655555555666 6679999999998764

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=90.83  E-value=1.4  Score=29.82  Aligned_cols=67  Identities=12%  Similarity=0.065  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++  ..|+.+-+..++.. ||    ..+.+-.+--+-..+-...=|.|+-+||+..+..+
T Consensus        12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            3678889999964444  49999999999985 65    33344444444444556667999999999988764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=90.80  E-value=0.94  Score=31.65  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+..+.  ..+-...=|.|+.+||+..+...
T Consensus       104 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~~  168 (185)
T 2sas_A          104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHHH
Confidence            467888999885434469999999999999998877655433  33445566999999999988764

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=90.75  E-value=1.4  Score=31.76  Aligned_cols=64  Identities=5%  Similarity=0.027  Sum_probs=46.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..+
T Consensus       103 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            5677778777433336899999999999999876554443443444  556999999999998874

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=90.60  E-value=1.6  Score=29.53  Aligned_cols=84  Identities=7%  Similarity=0.002  Sum_probs=53.2

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh-hcccccccccHHHHHHHhHH-cCC-CCHHHHHHHH
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQS-LGI-DSLDKFRERI  134 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~-l~~-dsi~~lk~~l  134 (150)
                      .+.++|..+-......|+.+-...++..+.........+..++. +-...-|.|++++|...+.. +|. -+.+.++..+
T Consensus        39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~  118 (155)
T 3ll8_B           39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV  118 (155)
T ss_dssp             THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence            66777777754334578888888888877766555444444443 33445588888888888877 343 3455555555


Q ss_pred             HHHHHHc
Q 031969          135 SFMRAEL  141 (150)
Q Consensus       135 ~~l~~~l  141 (150)
                      ..+-..+
T Consensus       119 ~~~~~~~  125 (155)
T 3ll8_B          119 DKTIINA  125 (155)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5544444

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=90.49  E-value=0.51  Score=34.62  Aligned_cols=67  Identities=9%  Similarity=-0.051  Sum_probs=43.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc--CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+.+++..+  |..+.+-.+-.+...+....-|.|+.+||+.-|++
T Consensus       127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            35677888888743333588888888888887  55544444444445555566688888888887764

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=90.46  E-value=3  Score=29.91  Aligned_cols=69  Identities=6%  Similarity=0.003  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHH-HHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969           57 RHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        57 ~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      ..+..+|..|-.. ....|+.+-+..++..+|++|.... +--+-..+....-|.|+.+||+..|..++..
T Consensus        14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~   84 (198)
T 2r2i_A           14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG   84 (198)
T ss_dssp             SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccC
Confidence            4566777777533 2357888888888888888876543 3334445556667888888888888876543

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=90.44  E-value=1.4  Score=31.13  Aligned_cols=110  Identities=11%  Similarity=0.053  Sum_probs=72.0

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhC-----CCCch-----hhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchH
Q 031969            8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD   77 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le-----~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~d   77 (150)
                      .++.++++...|+.++..-..+.+..     +..+.     .++...+.     .......+..+|..|-......|+.+
T Consensus         9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~g~i~~~   83 (190)
T 1g8i_A            9 KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP-----FGDPTKFATFVFNVFDENKDGRIEFS   83 (190)
T ss_dssp             CHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT-----TSCTHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             CHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCChHHHHHHHHHHHhcCCCCeEeHH
Confidence            45678888888998877655544432     22221     11222111     11245678899999865444689999


Q ss_pred             HHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        78 G~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      -...++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus        84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  128 (190)
T 1g8i_A           84 EFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI  128 (190)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence            999999888766544333334445566677999999999998873

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=90.43  E-value=3.5  Score=29.12  Aligned_cols=70  Identities=13%  Similarity=0.049  Sum_probs=49.2

Q ss_pred             CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCC-CcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      +...+.++|..|-.. ....|+.+-+..++..+|..+ ....+--+-..+-...-|.|+.+||+..+..++.
T Consensus        23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~   94 (190)
T 2l2e_A           23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR   94 (190)
T ss_dssp             CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSC
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcC
Confidence            456788888888643 245899999999999887653 2223333444556666789999999998887654

>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}

Probab=90.42  E-value=0.31  Score=34.45  Aligned_cols=40  Identities=33%  Similarity=0.517  Sum_probs=35.9

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..+.|.+++++ |.++..|++.|..++||++.|++-.++..
T Consensus        78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~  117 (126)
T 2lbc_A           78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHP  117 (126)
T ss_dssp             CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            46789999995 99999999999999999999999988764

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=90.40  E-value=0.54  Score=34.24  Aligned_cols=66  Identities=6%  Similarity=0.092  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHhcCCCC-CccchHHHHHHHh-hcCCC-C------CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL-DMILVDGITLLCN-DLQVD-P------QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~e-dLgv~-p------ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|..+|..| |.++ ..|+.+-+...+. .+|.+ |      .+-.+--+-..+....-|.|+.+||+..|...
T Consensus        97 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  171 (179)
T 3a8r_A           97 DNRLRTFFDMV-DKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS  171 (179)
T ss_dssp             HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred             HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            45677777777 3333 4788888887777 77765 3      22222222233344455778888888777653

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=90.30  E-value=1.4  Score=31.29  Aligned_cols=65  Identities=6%  Similarity=-0.000  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+.  .+-..+-...=|.|+.+||+..+..+
T Consensus       108 ~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~  172 (191)
T 2ccm_A          108 TKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY  172 (191)
T ss_dssp             HHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            356778888885434469999999999999996655443  23334455567999999999988764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=90.26  E-value=3.6  Score=29.13  Aligned_cols=62  Identities=21%  Similarity=0.215  Sum_probs=34.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccc--------ccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM--------CEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~--------g~~tr~eF~~g~~  120 (150)
                      ..+..+|..|-......|+.+-+.+++...+++++++..++-  .+....=        |.|+.+||+.-|.
T Consensus       108 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~--~~d~~~d~~~~~~~~G~i~~~eF~~~l~  177 (180)
T 3mse_B          108 TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFL--SVHSIKKGIPREHIINKISFQEFKDYML  177 (180)
T ss_dssp             CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHH--HHHTC---------CCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHH--HhhhccCcccccccCCeeeHHHHHHHHH
Confidence            567777777733223577777777777755555444433322  2222211        7777777776654

>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=90.18  E-value=0.3  Score=30.48  Aligned_cols=40  Identities=10%  Similarity=0.166  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            9 RDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+.+.++.++. +.+..+.+..|+++++|++.||+..++-.
T Consensus        10 ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~   50 (59)
T 1wgl_A           10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG   50 (59)
T ss_dssp             HHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCc
Confidence            56778887776 67899999999999999999999998754

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=89.58  E-value=1.9  Score=29.12  Aligned_cols=67  Identities=16%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccchHHHHHHHh-hcCCC---C--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKD-PYLD-MILVDGITLLCN-DLQVD---P--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~e-dLgv~---p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|..+|..|-. .... .|+.+-+..++. .||..   |  ....+--+-..+....-|.|+-+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   85 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL   85 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            3567889999974 3345 899999999998 88852   2  33333344445556667999999999988764

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=89.55  E-value=1.5  Score=31.87  Aligned_cols=62  Identities=10%  Similarity=0.134  Sum_probs=48.0

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +..+|..|-......|+.+-+.+++..+|++++.+..+  ...+....=|.|+.+||+..|...
T Consensus       130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~I~~~EF~~~~~~~  191 (208)
T 2hpk_A          130 SNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTF--FEKADTDKSGKLERTELVHLFRKF  191 (208)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHH--HHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence            78899988543446999999999999999776655443  334455567999999999998874

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=89.50  E-value=0.75  Score=32.02  Aligned_cols=67  Identities=7%  Similarity=0.093  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC----CCCCcHH-HH--------HHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIV-ML--------VVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg----v~ped~~-~L--------vLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+|.++|+.|-......|+.+-+...+..+|    ++|.+.. +.        .|...+.  .-|.|+.+||+..+..+
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~   82 (174)
T 1q80_A            5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM   82 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence            46788999999432336999999999999998    9987655 21        1222233  56899999999998876


Q ss_pred             CC
Q 031969          123 GI  124 (150)
Q Consensus       123 ~~  124 (150)
                      ..
T Consensus        83 ~~   84 (174)
T 1q80_A           83 VK   84 (174)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=89.44  E-value=0.77  Score=31.22  Aligned_cols=64  Identities=5%  Similarity=0.006  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|+.|-. .+..|+.+-+...+..+|++.+.+.-+  -..+....-|.|+.+||+..|..+
T Consensus        14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i--~~~~D~d~dG~id~~EF~~~m~~~   77 (106)
T 1eh2_A           14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRV--WELSDIDHDGMLDRDEFAVAMFLV   77 (106)
T ss_dssp             HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHH--HHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHH--HHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4667778888855 557999999999999999765543332  223445567999999999988764

>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=89.34  E-value=0.56  Score=28.89  Aligned_cols=39  Identities=8%  Similarity=0.156  Sum_probs=33.2

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ..++++.++==+++..-+..|++++||++.||+.-...+
T Consensus        11 ~~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~   49 (54)
T 2cp8_A           11 ALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLS   49 (54)
T ss_dssp             HHHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence            367888887667899999999999999999999887554

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=89.33  E-value=2.2  Score=30.48  Aligned_cols=78  Identities=9%  Similarity=0.075  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-------CCCCCcHHHHHHHHhhcc-cccccccHHHHHHHhHHcC--CC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLVVSWHMKA-ATMCEFSKQEFIGGLQSLG--ID  125 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-------gv~ped~~~LvLa~~l~a-~~~g~~tr~eF~~g~~~l~--~d  125 (150)
                      ...+..+|..|-......|+.+-+.+++..+       |....+-.+-.+-..+.. ..-|.|+.+||+..+..++  ++
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~  187 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMN  187 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCC
Confidence            4578889999844344699999999999854       444433333444445555 6679999999999999876  34


Q ss_pred             CHHHHHHH
Q 031969          126 SLDKFRER  133 (150)
Q Consensus       126 si~~lk~~  133 (150)
                      +-+.....
T Consensus       188 ~d~~f~~~  195 (204)
T 3e3r_A          188 TDEEFVAM  195 (204)
T ss_dssp             SHHHHHHH
T ss_pred             ChHHHHHH
Confidence            44444433

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=89.32  E-value=0.42  Score=34.00  Aligned_cols=67  Identities=7%  Similarity=0.019  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-----------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-----------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-----------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+.++|..|-...+..|+.+-+...+..+           |..+....+-.+-..+....-|.|+.+||+..+..
T Consensus        38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~  115 (191)
T 3khe_A           38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD  115 (191)
T ss_dssp             TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            45788999999843334689999999988877           65555555555555666666788999999887744

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=89.30  E-value=1.2  Score=33.26  Aligned_cols=64  Identities=13%  Similarity=0.022  Sum_probs=49.0

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|-......|+.+-+.+++..+   |+.++++..  +-..+....-|.|+.+||+.-|...
T Consensus       133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~--~~~~~D~d~dG~Is~~EF~~~~~~~  199 (226)
T 2lvv_A          133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHH--HHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            368888998844334699999999999888   999987433  3334455667999999999988764

>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A

Probab=89.26  E-value=0.55  Score=28.71  Aligned_cols=34  Identities=18%  Similarity=0.239  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~   43 (150)
                      .+.|.+.++ .|.+...|++.|...+||++.|.+-
T Consensus        12 ~~~Ia~Lm~-mGFsr~~ai~AL~~a~nnve~Aani   45 (52)
T 2ooa_A           12 DAKIAKLMG-EGYAFEEVKRALEIAQNNVEVARSI   45 (52)
T ss_dssp             HHHHHHHHH-TTCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHH
Confidence            367888888 4999999999999999999999764

>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1

Probab=89.25  E-value=0.46  Score=36.59  Aligned_cols=39  Identities=21%  Similarity=0.351  Sum_probs=35.4

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      ..++|+++++.||+.=-.+...|..++||++.|++---.
T Consensus         3 ~a~~VKeLRe~TGagmmdCKkAL~e~~GD~ekAie~LR~   41 (196)
T 1aip_C            3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRE   41 (196)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            367899999999999999999999999999999987653

>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=89.23  E-value=0.64  Score=28.54  Aligned_cols=38  Identities=18%  Similarity=0.210  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ...|++.+++ |.+...|++.|...+||++.|.+--.+.
T Consensus        10 e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~ef   47 (53)
T 2d9s_A           10 SSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILREF   47 (53)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence            4568888884 9999999999999999999998876544

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=89.09  E-value=2.5  Score=30.49  Aligned_cols=69  Identities=10%  Similarity=0.003  Sum_probs=54.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .....+..+|..|-......|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus        56 ~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A           56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            457788999999865444699999999999999877655444444455666778999999999998876

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=89.07  E-value=0.49  Score=32.82  Aligned_cols=64  Identities=17%  Similarity=0.264  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+..++  ..+....-|.|+.+||+..+..
T Consensus        98 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~--~~~d~~~dg~i~~~eF~~~~~~  161 (166)
T 2aao_A           98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELM--RDVDQDNDGRIDYNEFVAMMQK  161 (166)
T ss_dssp             THHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHH--HHHCTTCSSSBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHH--HHhCCCCCCcEeHHHHHHHHHh
Confidence            356777777774333357888888888888887765544332  2334455688888888877655

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=89.07  E-value=2.6  Score=31.21  Aligned_cols=68  Identities=10%  Similarity=0.109  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHHH----HHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~Lv----La~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|..|-......|+.+-+..++..+    |..+.+..+--    +...+....-|.|+.++|+..|..
T Consensus       100 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  175 (263)
T 2f33_A          100 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV  175 (263)
T ss_dssp             SCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred             cHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence            356788899988854334699999999999988    88876544322    444555566799999999988753

>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}

Probab=88.94  E-value=0.87  Score=29.17  Aligned_cols=72  Identities=17%  Similarity=0.183  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhc--ccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMK--AATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~--a~~~g~~tr~eF~~g~~~l~~dsi~~lk  131 (150)
                      +.|-..|+++-......+..+-+..++++.|++|+ ++..++-+-+.  .+++..  -+.-+..|++-|+.|+++.+
T Consensus         4 ~~l~~~~e~~~gr~ls~~e~~~i~~w~~~~~~~~e-lI~~A~~~a~~~~~~s~~Y--i~~Il~~W~~~gi~T~e~a~   77 (78)
T 2zc2_A            4 NALVEDFERELGRMLSPFELEDLQKTVSDDKTDPD-LVRSALREAVFNGKTNWNY--IQAILRNWRHEGISTLRQVE   77 (78)
T ss_dssp             CHHHHHHHHHHTSCCCHHHHHHHHHHHTTTCCCHH-HHHHHHHHHHHHTCCCHHH--HHHHHHHHHHTTCCSHHHHC
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCCCHHHHh
Confidence            34556666665532346778889999999998876 55555555442  222222  56788999999999998753

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=88.91  E-value=3.4  Score=28.70  Aligned_cols=75  Identities=8%  Similarity=0.026  Sum_probs=39.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCCC-CHHHHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFR  131 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk  131 (150)
                      .+...+..+|..+-...+..|+.+....++..+       ..+.-+. .+-...-|.|+++||...+..+|.. +.+.++
T Consensus        39 ~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~  111 (167)
T 1gjy_A           39 FNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVN  111 (167)
T ss_dssp             CCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHH
T ss_pred             cCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHH
Confidence            345566666666543223466666666666543       1222222 2233445777777777777776653 334444


Q ss_pred             HHHH
Q 031969          132 ERIS  135 (150)
Q Consensus       132 ~~l~  135 (150)
                      ..+.
T Consensus       112 ~~~~  115 (167)
T 1gjy_A          112 SIAK  115 (167)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            3333

>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*

Probab=88.75  E-value=0.38  Score=34.03  Aligned_cols=89  Identities=21%  Similarity=0.246  Sum_probs=58.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC-CCCcCCHHHHHHHHHHhcCCCC-CccchHHHH
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-SKSLTDTRHLEELYNRYKDPYL-DMILVDGIT   80 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~-~~~~~~~~~l~~lFd~Y~d~~~-d~I~~dG~~   80 (150)
                      -|++.+++.|.++++ .|-++..|++-|.+++.|.+.|++-.+.... ..+..++..++..++.+..... ....++.+ 
T Consensus         3 ~l~~~e~~~v~~l~~-MGFp~~~~~kAl~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~~~~~~~~~~~~~v-   80 (118)
T 4ae4_A            3 HMSPSERQCVETVVN-MGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLM-   80 (118)
T ss_dssp             CSCHHHHHHHHHHHH-TTCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHH-
T ss_pred             CCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhccCCccccccCHHHH-
Confidence            589999999999987 5999999999999998899999998886421 0012244556666666543211 12223222 


Q ss_pred             HHHhhcCCCCCcH
Q 031969           81 LLCNDLQVDPQDI   93 (150)
Q Consensus        81 ~~~edLgv~ped~   93 (150)
                      .-+.++|++...+
T Consensus        81 ~~L~eMGF~~~~a   93 (118)
T 4ae4_A           81 SKFKEMGFELKDI   93 (118)
T ss_dssp             HHHHHTTCCHHHH
T ss_pred             HHHHHcCCCHHHH
Confidence            2334677776544

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=88.70  E-value=2  Score=28.10  Aligned_cols=65  Identities=8%  Similarity=-0.017  Sum_probs=44.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcH-----------HHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDI-----------VMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~-----------~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+..+|..|=-.....|+.+-+..++..     +|..+.+.           .+--+...+....=|.||.+||+..+.
T Consensus        20 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           20 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            34778888883323359999999999986     68776542           122233344555669999999999876


Q ss_pred             H
Q 031969          121 S  121 (150)
Q Consensus       121 ~  121 (150)
                      .
T Consensus       100 ~  100 (103)
T 1snl_A          100 R  100 (103)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=88.67  E-value=0.21  Score=36.91  Aligned_cols=85  Identities=11%  Similarity=0.070  Sum_probs=51.1

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC---CHHHHHHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID---SLDKFRER  133 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d---si~~lk~~  133 (150)
                      ..+..+|..+-......|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..++-.   .-..-...
T Consensus        57 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~  136 (211)
T 2ggz_A           57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF  136 (211)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHH
Confidence            447778887754334578888888888877766543333333334455566888888888888776421   11122334


Q ss_pred             HHHHHHHc
Q 031969          134 ISFMRAEL  141 (150)
Q Consensus       134 l~~l~~~l  141 (150)
                      +..+-..+
T Consensus       137 ~~~~f~~~  144 (211)
T 2ggz_A          137 INLVFHKI  144 (211)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            55555554

>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4

Probab=88.55  E-value=0.95  Score=27.22  Aligned_cols=40  Identities=13%  Similarity=0.197  Sum_probs=33.7

Q ss_pred             hHHHHHHHHHH-hCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            8 NRDKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         8 ~~~~i~~F~~i-T~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ..+.++..+++ =.++..+++..|+++++|++.|++...+.
T Consensus         4 ~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~   44 (49)
T 1otr_A            4 HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE   44 (49)
T ss_dssp             HHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            35667778887 47789999999999999999999987754

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=88.42  E-value=1.5  Score=32.74  Aligned_cols=70  Identities=11%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      .+...+.++|+.|... .+..|+.+-+..++..+|.. +....+--+-..+....-|.|+.+||+..+..++
T Consensus        48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~  119 (224)
T 1s1e_A           48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL  119 (224)
T ss_dssp             CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHc
Confidence            4577888888887642 23589999999999999865 4444444455566667779999999999998764

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=88.26  E-value=0.53  Score=31.33  Aligned_cols=63  Identities=13%  Similarity=0.134  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCC--CC--CcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQV--DP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv--~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...|.+.|..|-+.+ +.|+.+-+..++..     ||.  .+  +.+.-  +-..+....-|.|+-+||+..+..
T Consensus         9 ~~~l~~~F~~fD~~~-g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~--l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A            9 IIGMIDMFHKYTRRD-DKIDKPSLLTMMKENFPNFLSACDKKGTNYLAD--VFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHTCCTT-SCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGT--HHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCC-CeECHHHHHHHHHHHhHhhhccccccCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHH
Confidence            357888999995433 49999999999976     554  33  33333  333455566799999999998865

>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A

Probab=88.13  E-value=0.2  Score=41.96  Aligned_cols=45  Identities=18%  Similarity=0.276  Sum_probs=40.8

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+++..++.|.+.+++ |-++..|++.|..++||.+.|++-.|+++
T Consensus       320 ~~t~ee~eaI~rL~~m-GF~~~~a~~al~a~~~n~e~A~~~L~~~~  364 (368)
T 1oqy_A          320 QVTPQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN  364 (368)
T ss_dssp             CCCTTTHHHHHHHHHH-TCCSHHHHHHTSSSSSCSSHHHHHHHHHH
T ss_pred             cCCCcCHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHhhCc
Confidence            5788899999999987 99999999999999999999999888653

>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1

Probab=88.12  E-value=0.9  Score=29.12  Aligned_cols=41  Identities=22%  Similarity=0.154  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      ...|.+.+++=-.++...++.|+.++.|++.||+--|+.+.
T Consensus        20 ~~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~   60 (67)
T 2dna_A           20 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG   60 (67)
T ss_dssp             HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            34677777754456667799999999999999999998754

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=88.11  E-value=1.2  Score=32.02  Aligned_cols=65  Identities=9%  Similarity=0.003  Sum_probs=49.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+.++|+.|- +.+..|+.+-+..++..+|++.+.+.-+  -..+....-|.|+.+||+..|...
T Consensus        49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I--~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKI--WKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHH--HHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence            4688999999997 4456999999999999999765543322  223445567999999999988764

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=88.10  E-value=1.9  Score=32.09  Aligned_cols=66  Identities=9%  Similarity=0.048  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-------CCCCcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..++..+|..|=......|+.+-+.+++..+|       ++++++..++  +-..+....=|.|+.+||+..+..
T Consensus       128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            45888999988543446999999999999885       3445554332  334445556699999999998875

>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1

Probab=87.81  E-value=0.58  Score=30.78  Aligned_cols=40  Identities=33%  Similarity=0.330  Sum_probs=33.0

Q ss_pred             hHHHHHHHHHHhCCC-HHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~-~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ++-.+.|.++|||.. ...-...|+..+.||..||.-.-+.
T Consensus        24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~   64 (80)
T 1vdl_A           24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAK   64 (80)
T ss_dssp             HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhcc
Confidence            345789999999997 5567889999999999999766544

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=87.75  E-value=0.85  Score=33.04  Aligned_cols=65  Identities=9%  Similarity=-0.112  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC-----CCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD-----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~-----ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .++|.+ |..+-......|+.+-+.+.+..||++     +..-.+--+...+....-|.|+.+||+..|..
T Consensus        32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~  101 (198)
T 1juo_A           32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV  101 (198)
T ss_dssp             CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH
Confidence            355666 776643233588888888888888873     34444444444555555677777777766654

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=87.69  E-value=1.2  Score=29.14  Aligned_cols=61  Identities=13%  Similarity=0.047  Sum_probs=44.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      .+..+..+|..|-......|+.+-+.+++..+|..+    +-.+-..+....-|.|+.+||++-+
T Consensus        73 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            456689999998543446999999999999888654    2333334445566999999998754

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=87.65  E-value=2.2  Score=31.88  Aligned_cols=66  Identities=15%  Similarity=0.089  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc------------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL------------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|--.....|+.+-+.+++..+            |....+-.+-.+-..+....=|.||.+||+..++.
T Consensus       137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  214 (229)
T 3dd4_A          137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK  214 (229)
T ss_dssp             HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            4678889988854334699999999999887            33433333444445566667799999999999885

>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1

Probab=87.64  E-value=0.59  Score=38.00  Aligned_cols=39  Identities=21%  Similarity=0.125  Sum_probs=35.9

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      ..++|+++++.||+.=-.+++.|..++||++.|++---.
T Consensus         4 ta~~VKeLRe~TGagmmdCKKAL~e~~GD~ekAie~LR~   42 (291)
T 1xb2_B            4 SKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHK   42 (291)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999998765

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=87.57  E-value=2.3  Score=28.82  Aligned_cols=65  Identities=11%  Similarity=0.035  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...|.+.|..|-+.++  ..|+.+-+..++.. ||..   ++.+.-+  -..+....-|.|+-+||+..+...
T Consensus        21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~l--i~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEK--MKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHH--HHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHH--HHHHCCCCCCCCcHHHHHHHHHHH
Confidence            3578889999962223  49999999999975 7733   2334333  334555667999999999988764

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=87.36  E-value=5.4  Score=29.41  Aligned_cols=65  Identities=5%  Similarity=-0.010  Sum_probs=36.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.++|..+-......|+.+....++..++........+.-++ .+-...-|.|+++||...+..
T Consensus        85 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~  150 (226)
T 2zfd_A           85 LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA  150 (226)
T ss_dssp             HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence            34555666664333346777777777776654433333333333 233445577777777776664

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=87.36  E-value=5.1  Score=28.78  Aligned_cols=130  Identities=7%  Similarity=-0.037  Sum_probs=71.1

Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHh---------CCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 031969           10 DKLQQFVSITGASEKAALQALKA---------SDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~A~~~L~~---------~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~   80 (150)
                      +.++.+...|+.++.....+.+.         .+..|.  .+.|...-..........+.++|..|-......|+.+-..
T Consensus        20 ~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~--~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~   97 (207)
T 2ehb_A           20 EDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIH--KEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFV   97 (207)
T ss_dssp             -CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEE--HHHHHHHHHSCTTCCCHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccC--HHHHHHHHhccccccHHHHHHHHHHhcCCCCCeEeHHHHH
Confidence            34666777788887665443332         112221  1111110000122333456778888854344689999999


Q ss_pred             HHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcC---CC--CHHHHHHHHHHHHHHc
Q 031969           81 LLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLG---ID--SLDKFRERISFMRAEL  141 (150)
Q Consensus        81 ~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~---~d--si~~lk~~l~~l~~~l  141 (150)
                      .++..++........+..++ .+-...-|.|+++||...+..+-   -.  +.+.++..+..+-..+
T Consensus        98 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~  164 (207)
T 2ehb_A           98 RSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQA  164 (207)
T ss_dssp             HHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHh
Confidence            99988876543333343333 34455669999999998887541   11  2334444444444555

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=87.24  E-value=2.9  Score=29.51  Aligned_cols=47  Identities=13%  Similarity=0.193  Sum_probs=30.2

Q ss_pred             CccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccccc-ccHHHHHHHhHHc
Q 031969           72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSL  122 (150)
Q Consensus        72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~-~tr~eF~~g~~~l  122 (150)
                      ..|+.+-+.. +..+|++|..-.++   ..+....-|. |+.+||+..|..+
T Consensus        43 G~i~~~el~~-l~~~g~~~~~~~l~---~~~D~d~~G~~I~~~EF~~~~~~~   90 (183)
T 1dgu_A           43 AQVPFEQILS-LPELKANPFKERIC---RVFSTSPAKDSLSFEDFLDLLSVF   90 (183)
T ss_dssp             TCSCHHHHHT-STTSSSCTTHHHHH---HHHSCSSSSCCCCHHHHHHHHHHH
T ss_pred             CcCcHHHHHH-HHhhhcCcHHHHHH---HHhCCCCCCCEecHHHHHHHHHHh
Confidence            4777777777 77777777543322   2244445577 7777777777654

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=87.22  E-value=1.8  Score=30.61  Aligned_cols=71  Identities=10%  Similarity=0.073  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      .+...+..+|+.|... ....|+.+-+..++..++- ......+-.+-..+....-|.|+.+||+..+..++.
T Consensus        22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~   94 (190)
T 1g8i_A           22 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSR   94 (190)
T ss_dssp             SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcC
Confidence            3577888888888643 2459999999999998821 122233333444555667799999999999987643

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=87.18  E-value=3.6  Score=28.97  Aligned_cols=72  Identities=8%  Similarity=-0.018  Sum_probs=51.5

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCC-CcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      .+...+.++|+.|... ....|+.+-+..++..++... ....+-.+-..+....-|.|+.+||+..+..++..
T Consensus        22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~   95 (190)
T 1fpw_A           22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG   95 (190)
T ss_dssp             STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccC
Confidence            4677888888887532 245999999999999996532 22333334445555667999999999999987653

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=87.18  E-value=6.1  Score=28.75  Aligned_cols=71  Identities=10%  Similarity=0.006  Sum_probs=44.8

Q ss_pred             CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHH-HHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (150)
                      +.+.+.++|+.|-.. ....|+.+-+..++..+|++|.... +--+-..+....-|.|+.+||+..|..++..
T Consensus        17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~   89 (211)
T 2ggz_A           17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE   89 (211)
T ss_dssp             -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCS
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccC
Confidence            456677777777533 2358888888888888888875433 3334445556667889999998888876543

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=86.86  E-value=2  Score=30.22  Aligned_cols=55  Identities=11%  Similarity=0.105  Sum_probs=41.6

Q ss_pred             CCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           68 DPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        68 d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      |.++ ..|+.+-+.+++..+|....+-.+-.+-..+-...=|.|+.+||+..+..+
T Consensus       112 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~  167 (186)
T 2hps_A          112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF  167 (186)
T ss_dssp             CTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            6555 589999999999999965554444444455555667999999999998775

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=86.85  E-value=1.9  Score=32.31  Aligned_cols=67  Identities=9%  Similarity=-0.019  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|+.|-...+..|+.+-....+..++-.+..-..-.+-..+-...-|.|+++||...+..+
T Consensus       101 ~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~  167 (229)
T 3dd4_A          101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI  167 (229)
T ss_dssp             HHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence            3445566666643233577777777777666543322222222223334455778888888777765

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=86.74  E-value=0.15  Score=33.43  Aligned_cols=65  Identities=11%  Similarity=0.058  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|-......|+.+-+.+++..+   |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus        40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            4567888888843333689999999999988   6665444433344445556679999999998765

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=86.58  E-value=3.4  Score=27.48  Aligned_cols=79  Identities=13%  Similarity=0.005  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHhcCCC---CCccchHHHHHHHhhcC-CCCCc-H---HHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 031969           56 TRHLEELYNRYKDPY---LDMILVDGITLLCNDLQ-VDPQD-I---VMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL  127 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~---~d~I~~dG~~~~~edLg-v~ped-~---~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi  127 (150)
                      ...|.+.|..|-..+   ...|+.+-+..++..++ -.+.+ +   .+=-+-..+-...=|.|+-+||+..|..+...--
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~~   89 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIA   89 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGGH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            367888999996433   36999999999998754 33322 1   1222223334455699999999999988755544


Q ss_pred             HHHHHHH
Q 031969          128 DKFRERI  134 (150)
Q Consensus       128 ~~lk~~l  134 (150)
                      ..++...
T Consensus        90 ~~~~~~~   96 (100)
T 3nxa_A           90 KLIHEQE   96 (100)
T ss_dssp             HHHHHHH
T ss_pred             HHHhccc
Confidence            4444443

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=85.88  E-value=3.1  Score=29.48  Aligned_cols=65  Identities=11%  Similarity=0.120  Sum_probs=37.5

Q ss_pred             HHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~--d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|.+.|+.|=  +.....|+.+-+...+..||++|..-.+--+... ....-|.|+-++|+.-|...
T Consensus         9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~   75 (159)
T 3i5g_C            9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEM   75 (159)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHh
Confidence            34555666662  1123478888888888888888865443222111 11123667777777666543

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=85.66  E-value=1  Score=35.41  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=36.6

Q ss_pred             CCCcchHHHHHHHHHHhC-------CCHHHHHHHHHhCCCCchhhhhhh
Q 031969            3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVF   44 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~-------~~~~~A~~~L~~~~w~le~Ai~~f   44 (150)
                      .|+..|++.|++|++...       .++..-.+||.+++||++.|...+
T Consensus        25 ~l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l   73 (296)
T 1aua_A           25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMF   73 (296)
T ss_dssp             TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHH
Confidence            578899999999988763       568899999999999999998776

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=85.57  E-value=1.6  Score=34.99  Aligned_cols=49  Identities=8%  Similarity=-0.065  Sum_probs=21.5

Q ss_pred             ccchHHHHHHH-hhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           73 MILVDGITLLC-NDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        73 ~I~~dG~~~~~-edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .|+.+-+..++ ..+|..+.+-.+-.+...+....-|.|+.++|+..|..
T Consensus       269 ~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~  318 (323)
T 1ij5_A          269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL  318 (323)
T ss_dssp             SEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            45555555555 55553322222222222333334455555555555443

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=85.41  E-value=2.4  Score=37.92  Aligned_cols=66  Identities=6%  Similarity=-0.064  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+.|.++|++|- ..+..|+.+-+...+..+        |..+..-.+-.|...+....-|.|+.+||+..|..+
T Consensus       531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~  604 (714)
T 3bow_A          531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI  604 (714)
T ss_dssp             CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            467899999997 344699999999999997        777766565556666777777888888888887663

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=85.13  E-value=1.1  Score=36.35  Aligned_cols=43  Identities=23%  Similarity=0.442  Sum_probs=37.7

Q ss_pred             CCCcchHHHHHHHHHHhC-------CCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~-------~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      .|++.|++.|++|++...       .++..-.+||.+.+||++.|...+-
T Consensus        34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~   83 (320)
T 3q8g_A           34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFV   83 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            588999999999998862       5678899999999999999998773

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=84.55  E-value=1.5  Score=32.44  Aligned_cols=64  Identities=9%  Similarity=0.060  Sum_probs=46.2

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcC---CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQ---VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg---v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+|..|=......|+.+-+.+++..+|   ++++++..+  ...+....=|.|+.+||+..|...
T Consensus       130 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l--~~~~D~d~dG~I~~~EF~~~~~~~  196 (219)
T 3cs1_A          130 FELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL--FKELDKNGTGSVTFDEFAAWASAV  196 (219)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHH--HHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHH--HHHhCCCCCCcEeHHHHHHHHHHh
Confidence            4578888888433336999999999999886   455654433  334455566999999999988763

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=84.49  E-value=3.9  Score=28.29  Aligned_cols=78  Identities=6%  Similarity=-0.005  Sum_probs=49.7

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCCC-CHHHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKF  130 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~d-si~~l  130 (150)
                      ..+...+.++|..+-...+..|+.+....++..+       ..+.-+. .+-...-|.|+++||...+..+|.. +.+.+
T Consensus        36 ~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~  108 (165)
T 1k94_A           36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTL  108 (165)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHH
T ss_pred             CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHH
Confidence            3456778888887754334578888877777653       2222222 3334456889999998888888764 55555


Q ss_pred             HHHHHHH
Q 031969          131 RERISFM  137 (150)
Q Consensus       131 k~~l~~l  137 (150)
                      +..+..+
T Consensus       109 ~~~~~~~  115 (165)
T 1k94_A          109 TTIVKRY  115 (165)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555554

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=84.38  E-value=3.9  Score=29.45  Aligned_cols=66  Identities=15%  Similarity=0.203  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...+..+|..|-......|+.+-+.+++..+|++++.+..+  -..+....-|.|+.+||+..|....
T Consensus        81 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~Is~~EF~~~~~~~~  146 (188)
T 1s6i_A           81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDM--IKEIDQDNDGQIDYGEFAAMMRKRK  146 (188)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHH--HHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCcEeHHHHHHHHHHcC
Confidence            45688889988433346899999999999999877654433  3445556669999999999887644

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=84.24  E-value=5  Score=28.78  Aligned_cols=68  Identities=6%  Similarity=-0.008  Sum_probs=47.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCCCCCcHHHHHHH----HhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+..+|..|-......|+.+-+.+++.    .+|....+-.+-.+.    ..+....-|.|+.+||+..+...
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  184 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN  184 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            356789999888543346999999999985    567665443332222    24555667999999999988763

>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=83.96  E-value=0.87  Score=28.71  Aligned_cols=39  Identities=23%  Similarity=0.248  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP   48 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~~~~   48 (150)
                      .+.|.+.++ .|-++..|++.|..+++ +++.|++-.|+..
T Consensus        10 e~~v~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~wL~~h~   49 (64)
T 2crn_A           10 PSLLEPLLA-MGFPVHTALKALAATGRKTAEEALAWLHDHC   49 (64)
T ss_dssp             CSSHHHHHH-TSCCHHHHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence            346888888 69999999999999865 9999999888654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=83.87  E-value=7  Score=32.36  Aligned_cols=82  Identities=13%  Similarity=0.136  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC----------cHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ----------DIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~----~~~~edLgv~pe----------d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .+.+.++|+.|-...+..|+.+-+    .+++..+|++|.          .-.+-.+-..+....-|.|+.+||+..+..
T Consensus       330 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~  409 (486)
T 3mwu_A          330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAID  409 (486)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHh
Confidence            467888999885433468998888    556667799887          334444555566677899999999988765


Q ss_pred             cC-CCCHHHHHHHHHHH
Q 031969          122 LG-IDSLDKFRERISFM  137 (150)
Q Consensus       122 l~-~dsi~~lk~~l~~l  137 (150)
                      .. ..+.+.++.....+
T Consensus       410 ~~~~~~~~~~~~~F~~~  426 (486)
T 3mwu_A          410 RTILLSRERMERAFKMF  426 (486)
T ss_dssp             TTTTCCHHHHHHHHHHH
T ss_pred             hhccchHHHHHHHHHHh
Confidence            42 33455555555444

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=83.78  E-value=3.1  Score=35.60  Aligned_cols=65  Identities=9%  Similarity=0.073  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+..+|..|-......|+.+-+.+++..+|....+-.+-.|...+....-|.|+.+||+.-|.
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~  448 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  448 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            45678888888433345888888999998888887666666666666666778899999987664

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=83.77  E-value=5.5  Score=29.41  Aligned_cols=67  Identities=9%  Similarity=0.053  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCCCCCcHHHHHHH----HhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-......|+.+-+.+++.    .+|..+.+-.+-.+.    ..+....=|.|+.+||+..+...
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~  195 (226)
T 2zfd_A          121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH  195 (226)
T ss_dssp             HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            56788999988543446999999999995    677766543332222    24555667999999999998764

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=83.62  E-value=0.55  Score=36.05  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=30.9

Q ss_pred             CCCcchHHHHHHHHHHhC----------CCHHHHHHHHHhCCCCchhhhhhh
Q 031969            3 KLSRSNRDKLQQFVSITG----------ASEKAALQALKASDWHLEGAFDVF   44 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~----------~~~~~A~~~L~~~~w~le~Ai~~f   44 (150)
                      .||+.+++.|.+|++...          .++....+||.+++||++.|...+
T Consensus         3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l   54 (262)
T 1r5l_A            3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLL   54 (262)
T ss_dssp             ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHH
Confidence            578888888888887753          468899999999999999998865

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=83.09  E-value=9.6  Score=26.83  Aligned_cols=120  Identities=8%  Similarity=0.048  Sum_probs=76.1

Q ss_pred             CCCCcchHHHHH-HHHHH-h-----C-CCHHHHHHHHHhCCCCc-hhhhhhhhccCC---C-----------------CC
Q 031969            2 HKLSRSNRDKLQ-QFVSI-T-----G-ASEKAALQALKASDWHL-EGAFDVFYSQPQ---S-----------------KS   52 (150)
Q Consensus         2 ~~l~~~~~~~i~-~F~~i-T-----~-~~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~---~-----------------~~   52 (150)
                      ++||..|.+.++ -|..+ +     | .+...-...|++-+.++ +.-|..+.....   +                 ..
T Consensus         1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccc
Confidence            367777766664 35443 1     2 24555667788888776 333444432211   1                 11


Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcc--cccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a--~~~g~~tr~eF~~g~~~  121 (150)
                      ......|.+.|..|=......|+.+-+.+.+..+|....+-.+=.|...+..  ..=|.|+-++|++-|..
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~  151 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA  151 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence            2345678888988844334699999999999999988765544444444443  33589999999998765

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=82.66  E-value=2.2  Score=29.77  Aligned_cols=64  Identities=8%  Similarity=0.040  Sum_probs=40.7

Q ss_pred             CHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcC----------CCCCcHHHHH--HHHhhcccccccccHHHHHHHh
Q 031969           55 DTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQ----------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLg----------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ....+..+|..| |.++ ..|+.+-+.+.+..++          ++++.+..++  +-..+....=|.|+.+||+..|
T Consensus        66 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B           66 PQELQLHYFKMH-DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             HHHHHHHHHHHT-CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             HHHHHHHHHHHh-CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            356788999999 4444 6999999999998884          3334343332  1133445566999999998754

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=82.06  E-value=4.3  Score=30.14  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHH----HHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVML----VVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~L----vLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|..|-......|+.+-+..++..+    |..+.+-.+-    .+-..+....-|.|+.+||+..|..
T Consensus       101 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          101 DNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL  176 (272)
T ss_dssp             CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCC
T ss_pred             ccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhh
Confidence            456789999999954334699999999999988    8776544332    1444555666799999999998754

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=81.93  E-value=1.7  Score=30.76  Aligned_cols=66  Identities=9%  Similarity=0.005  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-----CC--CcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-----DP--QDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-----~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|-......|+.+-+.+++..+|.     .+  +.+..++  +...+....=|.|+.+||+..+..
T Consensus        97 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  171 (183)
T 1dgu_A           97 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  171 (183)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            357888898885433468999999999998876     22  2232221  334445556699999999987765

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=81.84  E-value=7.5  Score=27.90  Aligned_cols=30  Identities=3%  Similarity=0.004  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCND   85 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed   85 (150)
                      ...+..+|..|-......|+.+-+.+++..
T Consensus       121 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~  150 (191)
T 3k21_A          121 KKLIYCAFRVFDVDNDGEITTAELAHILYN  150 (191)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            344555555552222235555555555554

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=81.56  E-value=3.2  Score=28.97  Aligned_cols=66  Identities=8%  Similarity=0.149  Sum_probs=52.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..|..+|.+|... ...|+.+-+.+++..     ||-.+.+-.+=-+-..+-.-.=|.|+=+||+.-|..+-
T Consensus        15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~   85 (121)
T 4drw_A           15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   85 (121)
T ss_dssp             HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            4567788888653 469999999999976     88877766666667777777789999999999887753

>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.46  E-value=1.6  Score=27.84  Aligned_cols=41  Identities=10%  Similarity=0.145  Sum_probs=35.2

Q ss_pred             chHHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            7 SNRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         7 ~~~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ..++.+.++.++. +.+..+-...|+++++|++.||+...+-
T Consensus        17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~m   58 (67)
T 2dhy_A           17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM   58 (67)
T ss_dssp             CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            3467788898887 6689999999999999999999998854

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=81.10  E-value=4.3  Score=29.19  Aligned_cols=118  Identities=13%  Similarity=0.146  Sum_probs=72.2

Q ss_pred             CCCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCc-hhhhhhhhccC----CC---------------CCcCCH
Q 031969            3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHL-EGAFDVFYSQP----QS---------------KSLTDT   56 (150)
Q Consensus         3 ~l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~l-e~Ai~~f~~~~----~~---------------~~~~~~   56 (150)
                      .||..|.+.++ -|..+    .|. +...-..+|...+.++ +.-+...+...    .+               ......
T Consensus         4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~   83 (176)
T 2lhi_A            4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE   83 (176)
T ss_dssp             CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcH
Confidence            46665544443 34443    222 4555666777777665 23333433221    11               011124


Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..|.+.|..|=......|+.+-+.+.+..+|..+.+-.+=-+-..+. ..=|.|+-+||+.-|+.
T Consensus        84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k  147 (176)
T 2lhi_A           84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  147 (176)
T ss_dssp             HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence            67888999883323369999999999999999876654433333443 44599999999998865

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=80.85  E-value=3.7  Score=33.93  Aligned_cols=67  Identities=10%  Similarity=-0.015  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC-------cHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ-------DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~----~~~~edLgv~pe-------d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|+.|-...+..|+.+-+    .+++..+|.+|.       +..+--+-..+....-|.|+.+||+..+...
T Consensus       334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~  411 (484)
T 3nyv_A          334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR  411 (484)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence            356788888885433468999888    666677798887       3444444455556667999999999887664

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=80.64  E-value=6.8  Score=29.58  Aligned_cols=67  Identities=12%  Similarity=0.006  Sum_probs=47.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCC--------CcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDP--------QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~p--------ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....+..+|..|-......|+.+-+..++..+    |..+        ..-.+-.+-..+....-|.|+.+||+..+..
T Consensus       163 ~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~  241 (256)
T 2jul_A          163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK  241 (256)
T ss_dssp             HHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            46788899998854344699999999999887    6432        1122333334445556699999999999887

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=80.19  E-value=4.8  Score=34.50  Aligned_cols=65  Identities=9%  Similarity=0.073  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...|.+.|..|=......|+.+-+.+++..+|....+-.+--|-..+-...=|.|+.+||++-|.
T Consensus       374 eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt  438 (440)
T 3u0k_A          374 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT  438 (440)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence            45677778877332335888888888888888777655554444555555568888888887653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=80.17  E-value=4.5  Score=33.75  Aligned_cols=67  Identities=9%  Similarity=0.007  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+.++|+.|-...+..|+.+-+...+..+        |+.+.+..+-.+-..+....-|.|+.+||+..+...
T Consensus       354 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~  428 (504)
T 3q5i_A          354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK  428 (504)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred             HHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh
Confidence            4678889999854344699999999999888        667766666666667777778999999999887653

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=80.04  E-value=2.5  Score=38.04  Aligned_cols=79  Identities=10%  Similarity=0.103  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRERI  134 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~l  134 (150)
                      ..+..+|..|-...+..|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..|....  .++.+.++...
T Consensus       725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF  804 (863)
T 1sjj_A          725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF  804 (863)
T ss_dssp             HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence            4566677766332335899999999999999988776665565666666779999999999887753  33445555444


Q ss_pred             H
Q 031969          135 S  135 (150)
Q Consensus       135 ~  135 (150)
                      .
T Consensus       805 ~  805 (863)
T 1sjj_A          805 K  805 (863)
T ss_dssp             H
T ss_pred             H
Confidence            3

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	150
d1v92a_	46	a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-	9e-10

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 46

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.3 bits (118), Expect = 9e-10
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	150
d1v92a_	46	NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {	99.62
d1oaia_	59	FG-binding, C-terminal domain of TAP {Human (Homo	98.42
d2g3qa1	43	Endocytic protein Ede1, YBL047C {Saccharomyces cer	97.74
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	96.94
d1xb2b1	56	Elongation factor Ts (EF-Ts), N-terminal domain {C	96.92
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	96.81
d1oqya1	41	DNA repair protein Hhr23a {Human (Homo sapiens) [T	96.61
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	96.5
d1wj7a1	91	Ubiquitin-associated protein 2-like Ubap2l {Mouse	96.48
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	96.46
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	96.37
d1aipc1	52	Elongation factor Ts (EF-Ts), N-terminal domain {T	96.36
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	96.29
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	96.27
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	96.25
d1efub3	54	Elongation factor Ts (EF-Ts), N-terminal domain {E	96.14
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	96.03
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.99
d1wgna_	63	Ubiquitin-associated protein 1, UBAP1 {Human (Homo	95.66
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.57
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	95.51
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.42
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	95.24
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	95.0
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	94.86
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	94.72
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	94.69
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	94.63
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	94.63
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	94.63
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	94.57
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	94.44
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	94.34
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	94.3
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	94.08
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	93.95
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	93.87
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	93.72
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	93.67
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	93.57
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	93.37
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	93.23
d1wjia_	63	Tudor domain containing protein 3, TDRD3 {Human (H	93.16
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	92.98
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	92.98
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	92.96
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	92.88
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	92.82
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	92.71
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	92.65
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	92.6
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	92.49
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	92.41
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	92.26
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	92.18
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	91.94
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	91.71
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	91.62
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	91.44
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	91.37
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	91.35
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	91.27
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	91.15
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	90.93
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	90.91
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	90.8
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	90.7
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	90.52
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	90.51
d1vdla_	80	Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (M	90.23
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	90.04
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	89.92
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	89.41
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	89.36
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	89.25
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	88.95
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	88.86
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	88.71
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	87.86
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	87.42
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	87.28
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	86.98
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	86.72
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	86.6
d1wgla_	59	Toll-interacting protein {Human (Homo sapiens) [Ta	85.94
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	85.61
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	85.44
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	84.91
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	84.35
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	84.24
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	84.03
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	83.18
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	82.53
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	81.64
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	81.39
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	80.66
d2cpwa1	51	Cbl-interacting protein p70, STS1 {Human (Homo sap	80.54
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	80.14
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	80.07

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=2.1e-16  Score=95.39  Aligned_cols=45  Identities=33%  Similarity=0.620  Sum_probs=42.1

Q ss_pred             CCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         4 l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ++++++++|.||++|||+++.+|++||+.++|||+.||+.||++.
T Consensus         1 ma~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g   45 (46)
T d1v92a_           1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             CTTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             CCccHHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence            467889999999999999999999999999999999999999863

>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: FG-binding, C-terminal domain of TAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.6e-07  Score=58.43  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=41.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~   46 (150)
                      -|++.|.++|..|...||.+..-++.+|+.++||++.|+..|-+
T Consensus         2 ~ls~~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~~   45 (59)
T d1oaia_           2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH   45 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999953

>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Endocytic protein Ede1, YBL047C
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=97.74  E-value=1.4e-05  Score=45.86  Aligned_cols=39  Identities=23%  Similarity=0.440  Sum_probs=32.4

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      +...|++.++ .|-++..|+..|++++||++.|+|...++
T Consensus         4 k~~ai~eL~~-MGF~e~~A~~AL~k~~wnleaAtN~LLd~   42 (43)
T d2g3qa1           4 KSLAVEELSG-MGFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHHHT-TTSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             HHHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            4466777766 47799999999999999999999987654

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.94  E-value=0.0032  Score=39.22  Aligned_cols=70  Identities=6%  Similarity=0.011  Sum_probs=59.7

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ......|.++|..|=......|+.+-+.+++..||+.+.+-.+--+-..+....-|.|+-++|++-|+.+
T Consensus         5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            3456889999999955445799999999999999999988777777778888888999999999988875

>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Cow (Bos taurus), mitochondrial [TaxId: 9913]

Probab=96.92  E-value=0.00061  Score=41.27  Aligned_cols=40  Identities=23%  Similarity=0.134  Sum_probs=36.1

Q ss_pred             cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      +...++|.+.++.||++--.+...|+.++||++.|++-.-
T Consensus         2 a~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~Lr   41 (56)
T d1xb2b1           2 ASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLH   41 (56)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999997653

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.81  E-value=0.003  Score=38.30  Aligned_cols=64  Identities=6%  Similarity=0.093  Sum_probs=54.0

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.++|+.|=......|+.+-+...+..+|..+.+-.+-.+-..+-...-|.|+.+||+..|+++
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            5678999844344699999999999999999988777777777777788999999999998763

>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DNA repair protein Hhr23a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0011  Score=37.52  Aligned_cols=38  Identities=21%  Similarity=0.236  Sum_probs=33.1

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      +..+.|.+.++ .|-++..|+..|++++||++.|++--|
T Consensus         3 ~~e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~Ll   40 (41)
T d1oqya1           3 EYETMLTEIMS-MGYERERVVAALRASYNNPHRAVEYLL   40 (41)
T ss_dssp             THHHHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTTT
T ss_pred             hHHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            34677888888 689999999999999999999998654

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=96.50  E-value=0.0092  Score=36.85  Aligned_cols=68  Identities=10%  Similarity=0.154  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ...|.++|..|=......|+.+-+.+.+..+|..+.+..+-.+-..+-...-|.|+-+||++-|++.+
T Consensus         8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~   75 (77)
T d1oqpa_           8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS   75 (77)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence            46799999999654456999999999999999999877777666777777789999999999988754

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.48  E-value=0.002  Score=42.44  Aligned_cols=42  Identities=21%  Similarity=0.376  Sum_probs=38.5

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      =++.|++.+++||+++..|.-.|-.++.+++.||+..++..+
T Consensus        32 i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~~   73 (91)
T d1wj7a1          32 FEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNP   73 (91)
T ss_dssp             HHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHhcCC
Confidence            367899999999999999999999999999999999998754

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=96.46  E-value=0.0075  Score=37.88  Aligned_cols=69  Identities=7%  Similarity=0.080  Sum_probs=56.7

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+...|.++|..|=......|+.+-+.+.+..+|..+.+-.+-.+-..+....=|.|+-++|+.-|+.+
T Consensus        12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~   80 (81)
T d1fi5a_          12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV   80 (81)
T ss_dssp             CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence            356789999999965445799999999999999999877666666666667777999999999987653

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.37  E-value=0.053  Score=36.51  Aligned_cols=118  Identities=8%  Similarity=0.116  Sum_probs=77.2

Q ss_pred             CCcchHHHHHH-HHHH----hC-CCHHHHHHHHHhCCCCc-hhhhhhhhccCCC---------------CCcCCHHHHHH
Q 031969            4 LSRSNRDKLQQ-FVSI----TG-ASEKAALQALKASDWHL-EGAFDVFYSQPQS---------------KSLTDTRHLEE   61 (150)
Q Consensus         4 l~~~~~~~i~~-F~~i----T~-~~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~~---------------~~~~~~~~l~~   61 (150)
                      |++.|-+.+++ |..+    +| ++...-...|++.++++ +.-+..++.+..+               ........|.+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHhccCccccccccccccccccccchhhhHHH
Confidence            34555444443 4433    23 35666677788877776 3446666654332               11234677888


Q ss_pred             HHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           62 LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        62 lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .|..|=......|+.+-+.+.+..+|..+.+-.+--|...+... -|.|+-++|++-|+.-
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            99988433346999999999999999887665544444455444 4999999999988753

>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=96.36  E-value=0.0027  Score=37.71  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=34.0

Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhh
Q 031969            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (150)
Q Consensus         8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f   44 (150)
                      +-++|++.++.||++--.+...|+.+++|++.|++-.
T Consensus         2 ~~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~L   38 (52)
T d1aipc1           2 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLL   38 (52)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            3578999999999999999999999999999999755

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.29  E-value=0.0057  Score=37.90  Aligned_cols=68  Identities=10%  Similarity=0.087  Sum_probs=51.8

Q ss_pred             CHHHHHHHHHHhcCCC--CCccchHHHHHHHhhcCCCCC--cHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPY--LDMILVDGITLLCNDLQVDPQ--DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~--~d~I~~dG~~~~~edLgv~pe--d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ++..|.++|+.|...+  ...|+.+-+.+.+..||..+.  ...+--+-..+....=|.|+-+||+.-|.++
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            5678999999995432  368999999999999987653  3333334455666777999999999988764

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.27  E-value=0.0076  Score=37.25  Aligned_cols=65  Identities=9%  Similarity=0.148  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.++|..|=......|+++-+...+..+|+.|.+-.+--+-..+....-|.|+.++|+.-|.+
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45677788885444469999999999999999998887777777788888899999999987754

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=96.25  E-value=0.023  Score=35.49  Aligned_cols=66  Identities=11%  Similarity=-0.031  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+.+.++|+.|=...+..|+.+-+.+.+..|| .|..-.+--+-..+-...-|.|+.+||+..|+..
T Consensus         5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           5 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            35788999999665557999999999999999 5665566666677777788999999999987763

>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0035  Score=37.50  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f   44 (150)
                      .+.|++.++.||++-..+...|+.++||++.|++-.
T Consensus         5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~L   40 (54)
T d1efub3           5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENM   40 (54)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            468999999999999999999999999999999755

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=96.03  E-value=0.016  Score=35.38  Aligned_cols=65  Identities=11%  Similarity=0.129  Sum_probs=53.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.+.|+.|=......|+.+.+...+..+|+.+..-.+--+-..+....-|.|+-++|+.-|.+
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            45667788887655579999999999999999998777777777777778899999999987754

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.99  E-value=0.014  Score=34.92  Aligned_cols=63  Identities=10%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g  118 (150)
                      ...|.++|..|=......|+.+-+.+.+..||..+.+-.+-.+-..+....-|.|+-++|++-
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            467889999985544479999999999999999998887777777777778899999999863

>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0057  Score=37.51  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=39.2

Q ss_pred             CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      .+++..++.|.+.+++ |-++..|++-|+.++||+|.|++-.|.+.
T Consensus        14 ~~~~~de~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~~   58 (63)
T d1wgna_          14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHS   58 (63)
T ss_dssp             TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred             cCCchhHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            3566678889999884 88999999999999999999999999764

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.57  E-value=0.038  Score=34.37  Aligned_cols=65  Identities=8%  Similarity=0.050  Sum_probs=52.3

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.+.|..|=......|+++-+.+.+..+|+++.+..+--+-..+....-|.|+-++|+.-|.+
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            35666788886544579999999999999999998877666666666667799999999998764

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=95.51  E-value=0.019  Score=34.79  Aligned_cols=65  Identities=9%  Similarity=0.108  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC-CcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..|.++|..|-......|+.+-+.+.+..+|..| .+-.+--+-..+-...-|.|+-+||+.-|++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            4688999999765557999999999999999986 5555555566777778899999999987764

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.42  E-value=0.03  Score=33.01  Aligned_cols=60  Identities=10%  Similarity=0.125  Sum_probs=51.3

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHH
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG  117 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~  117 (150)
                      .|.+.|..|=......|+.+-+.+.+..+|..+++..+-.|...+....=|.|+-++|++
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            567788888654557999999999999999999988888887777778889999999985

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.24  E-value=0.017  Score=36.25  Aligned_cols=42  Identities=29%  Similarity=0.357  Sum_probs=37.4

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      ...+.|.+.++ .|-++..|++.|+.+++|++.|++-.|+++.
T Consensus        28 ~d~~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls~~~   69 (73)
T d1wiva_          28 IDQSSVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFNNSG   69 (73)
T ss_dssp             SCHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence            34577999997 7999999999999999999999999998864

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=95.00  E-value=0.058  Score=35.41  Aligned_cols=99  Identities=10%  Similarity=0.110  Sum_probs=62.1

Q ss_pred             hCCCHHHHHHHHHhCC--CCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHH
Q 031969           19 TGASEKAALQALKASD--WHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVML   96 (150)
Q Consensus        19 T~~~~~~A~~~L~~~~--w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~L   96 (150)
                      .|.|++.-...+..++  -.++  ...|+.... -+......|..+|..|-......|+.+-+...+..|+.+.+.+..-
T Consensus         3 ~gls~~di~~~~~~~~~~gsi~--~~eF~~~~~-l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~   79 (107)
T d2pvba_           3 AGLKDADVAAALAACSAADSFK--HKEFFAKVG-LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA   79 (107)
T ss_dssp             TTSCHHHHHHHHHHTCSTTCCC--HHHHHHHHT-GGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred             CCCCHHHHHHHHHhccCCCCcC--HHHHHHHHh-cccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence            4566665555555532  1121  123332211 1234678899999999655557999999999999997654433322


Q ss_pred             HHH---HhhcccccccccHHHHHHHhH
Q 031969           97 VVS---WHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        97 vLa---~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      .+-   ..+-...-|.|+.+||+.-|+
T Consensus        80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          80 ETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            233   334445679999999998776

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=94.86  E-value=0.063  Score=34.89  Aligned_cols=18  Identities=17%  Similarity=0.189  Sum_probs=8.9

Q ss_pred             ccccccHHHHHHHhHHcC
Q 031969          106 TMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus       106 ~~g~~tr~eF~~g~~~l~  123 (150)
                      .-|.||+++|..-+..++
T Consensus        88 ~~g~i~~~el~~~~~~~~  105 (134)
T d1jfja_          88 GDGKLTKEEVTSFFKKHG  105 (134)
T ss_dssp             SSSEEEHHHHHHHHTTTT
T ss_pred             cCCcccHHHHHHHHHhcC
Confidence            345555555555544444

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=94.72  E-value=0.1  Score=32.52  Aligned_cols=65  Identities=8%  Similarity=0.006  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+.+.|+.|=..+ ...|++.-+.+.+..||+.|.+-.+--+--.+....-|.|+-++|+.-|.+
T Consensus        15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          15 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            56777899985433 359999999999999999998776666666666666799999999987764

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.69  E-value=0.023  Score=35.59  Aligned_cols=42  Identities=26%  Similarity=0.357  Sum_probs=36.3

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~   49 (150)
                      ..++.|++.++ .|-++..|+..|+++++|+|.|++--|+...
T Consensus        28 ~~ee~i~~L~~-MGF~~~~a~~AL~~~~~n~e~A~~~Ll~~~~   69 (73)
T d1vg5a_          28 ASEEQIQKLVA-MGFDRTQVEVALAAADDDLTVAVEILMSQSG   69 (73)
T ss_dssp             CCHHHHHHHHT-TTCCHHHHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred             cCHHHHHHHHH-hCCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            44678998877 4789999999999999999999999998753

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=94.63  E-value=0.078  Score=34.03  Aligned_cols=66  Identities=9%  Similarity=0.024  Sum_probs=49.4

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhhc-----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edL-----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|.+.++  ..|+.+.+.+++..+     +-.+.+-.+=-+-..+-...=|.|+-+||+.-+..+
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l   81 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   81 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            467789999987654  479999999999874     333343444445556666777999999999988775

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=94.63  E-value=0.079  Score=35.24  Aligned_cols=65  Identities=11%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.|.++|+.|-......|+.+-+..++..+|..+.+..+-.+-..+....-|.++-++|+..+..
T Consensus         9 ~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~   73 (146)
T d1exra_           9 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR   73 (146)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHH
Confidence            45777788886544568999999999999999888777777777777777788888888887654

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=94.63  E-value=0.012  Score=37.43  Aligned_cols=63  Identities=13%  Similarity=0.045  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      +.|.++|+.|=......|+.+-+.+.+..||+.|.+-.+--|-..+....-|.|+.+||+..|
T Consensus        23 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          23 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            457788998854345699999999999999999988777777777888788999999998654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.57  E-value=0.046  Score=33.91  Aligned_cols=69  Identities=10%  Similarity=0.073  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHhcCCCC--CccchHHHHHHHhhc--CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           54 TDTRHLEELYNRYKDPYL--DMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edL--gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .....|..+|.+|.+.++  +.|+.+-+.+++..+  +..++.-.+=.+...+....=|.|.=+||+.-+.++
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            457899999999976433  589999999999888  443332222234455566666999999999988764

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.033  Score=35.77  Aligned_cols=65  Identities=6%  Similarity=0.040  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+++.++|+.+--...+.|+.+-+..++..+|++.+.+.  .+-..+-...-|.++++||+..|+-
T Consensus         8 e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~--~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_           8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLA--HIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHH--HHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHH--HHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            3567889999973323469999999999999998655433  2333444556799999999988753

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.1  Score=32.09  Aligned_cols=64  Identities=9%  Similarity=0.113  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ...|.+.|..|=......|+.+-+.+.|..+|+.+.+..+-.|...+....-|.|+=.+|+.-+
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            3567788888854445799999999999999999999999999999999889999999999754

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=94.30  E-value=0.11  Score=34.54  Aligned_cols=118  Identities=9%  Similarity=0.107  Sum_probs=78.1

Q ss_pred             CCCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCch-hhhhhhhcc---CCCCC----------------cCCH
Q 031969            3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHLE-GAFDVFYSQ---PQSKS----------------LTDT   56 (150)
Q Consensus         3 ~l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~le-~Ai~~f~~~---~~~~~----------------~~~~   56 (150)
                      +|+..+.+.++ .|..+    +|. +...=..+|...++.+. ..+..++..   ...+.                ....
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            35665554444 35544    222 45556667777777763 223333322   11111                0123


Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ..+.++|+.|-......|+.+-+..++..+|..+.+..+--+...+....=|.|+.++|++-+.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            5678899988443446999999999999999998887777888888888889999999998664

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=94.08  E-value=0.13  Score=34.34  Aligned_cols=66  Identities=12%  Similarity=0.138  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhccc--ccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~  121 (150)
                      ...+.+.|..|=......|+.+-+...+..||++|....+--+.......  ..|.++-++|+.-+..
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQA   70 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhh
Confidence            45677778777433335788888888888888877554433333333322  3467777777766544

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.055  Score=34.83  Aligned_cols=63  Identities=6%  Similarity=0.004  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....++|+.+-+ ....|+.+-+..++...|++.+++.  -+-..+-...-|.++++||+-.++-
T Consensus         9 ~~~y~~~F~~~D~-~~G~i~~~el~~~l~~~gl~~~~L~--~Iw~~~D~~~dG~l~~~EF~~a~~L   71 (95)
T d2jxca1           9 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILG--RVWELSDIDHDGMLDRDEFAVAMFL   71 (95)
T ss_dssp             HHHHHHHHHHTCC-BTTEEEHHHHHHHHTTSSCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCceeHHHHHHHHHHcCCCHHHHH--HHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            4678899999864 4469999999999999999765433  2333445566799999999877664

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=93.87  E-value=0.16  Score=33.30  Aligned_cols=68  Identities=9%  Similarity=0.058  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....|.++|..|=......|+.+-+.+++..|   |..+.+-.+=-+-..+-...-|.|+.+||++-|++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            456789999999965445799999999998877   55565544444445555667799999999998764

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.72  E-value=0.086  Score=36.97  Aligned_cols=71  Identities=8%  Similarity=0.132  Sum_probs=53.6

Q ss_pred             cCCHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           53 LTDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..+.+.|.+||.+|+...+ ..|+.+-..+++..+|....+..+=.|-..+-...-|.|+-.||+.++..+.
T Consensus        17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~   88 (189)
T d1jbaa_          17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL   88 (189)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS
T ss_pred             ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhc
Confidence            4467788888888875433 5888888888888888776655555666677777788889999988888754

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=93.67  E-value=0.093  Score=33.37  Aligned_cols=67  Identities=10%  Similarity=-0.022  Sum_probs=50.9

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhhcCCC----C-CcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDLQVD----P-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv~----p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..|.++|.+|.+.++  +.|+.+-+.+.+..++..    + ....+--+...+-...=|.|+-+||+.-|..+-
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            578889999987654  589999999999988753    2 333444455666777779999999999887653

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.57  E-value=0.13  Score=33.83  Aligned_cols=66  Identities=6%  Similarity=-0.005  Sum_probs=50.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+.++|+++--.....|+.+-+..++...|++.+.+..++  ..+-...-|.++++||+-.|+=
T Consensus        19 ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw--~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHH--HHhccCCCCeECHHHHHHHHHH
Confidence            35688999999985333468999999999999999887755422  2344556799999999987764

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.37  E-value=0.12  Score=33.69  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=53.0

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ......+.++|+.|-......|+.+-+.+++..|+..   +++-.+-.+-..+-...=|.|+.+||+.-|+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            3467889999999987556799999999999998543   4555555555666666779999999998775

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.23  E-value=0.43  Score=33.09  Aligned_cols=70  Identities=14%  Similarity=0.135  Sum_probs=52.8

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH-HHHHHHhhcccccccccHHHHHHHhHH
Q 031969           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.++...|.++|+.+-......|+.+-+.+.+..++..+.+.. +-.+-..+....-|.|+.+||+.-|..
T Consensus        14 ~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~   84 (181)
T d1hqva_          14 ALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY   84 (181)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh
Confidence            4567899999999984323369999999999999998764433 333444566667799999999987765

>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Tudor domain containing protein 3, TDRD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.16  E-value=0.043  Score=33.21  Aligned_cols=41  Identities=27%  Similarity=0.401  Sum_probs=36.2

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~   48 (150)
                      ...+.|++.+++ |-++..|++.|..+++|++.|++-.|++.
T Consensus         8 ~d~~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~~   48 (63)
T d1wjia_           8 VDEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             SCHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             cCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            446788898885 89999999999999999999999998764

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.19  Score=32.86  Aligned_cols=65  Identities=9%  Similarity=0.171  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..|.++|+.|=....+.|+++-+..++..+|..+....+.-+...+.....|.++.++|+..+..
T Consensus         6 ~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~   70 (141)
T d2obha1           6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ   70 (141)
T ss_dssp             HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHH
Confidence            46778888883223358888888888888888888777777777777777788888888777654

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.29  Score=31.92  Aligned_cols=63  Identities=14%  Similarity=0.130  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g  118 (150)
                      ...+..+|..|-......|+.+.+.+.|..+|+...+-.+-.+...+-...=|.|+-+||++-
T Consensus        78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~  140 (141)
T d2obha1          78 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI  140 (141)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHh
Confidence            355777888877655578999999999999999988888777777887777799999999864

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=92.96  E-value=0.32  Score=33.81  Aligned_cols=67  Identities=13%  Similarity=-0.006  Sum_probs=54.5

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..++|.++|..+=......|+.+-+.+.+..+|+.+.+..+--|-..+....-|.|+.++|+..|..
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~   82 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF   82 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc
Confidence            3567999999983323369999999999999999998877777778888888899999999887754

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.88  E-value=0.2  Score=34.99  Aligned_cols=63  Identities=3%  Similarity=-0.016  Sum_probs=41.5

Q ss_pred             HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc----H-HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD----I-VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped----~-~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +-++|++|+++ +.+|+.+-+.+.+..+|+++..    + .+--|...+-...-|.++-+||+.-|..+
T Consensus         2 ~~~~F~~~a~~-dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~   69 (165)
T d1k94a_           2 VYTYFSAVAGQ-DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL   69 (165)
T ss_dssp             HHHHHHHHHGG-GTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHhcCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc
Confidence            45789999764 3589999999999999987631    1 11222233445556777777777776653

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.82  E-value=0.094  Score=33.24  Aligned_cols=64  Identities=5%  Similarity=-0.013  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .+.+.++|+.+--.....|+.+-+..++...|++.+.+.-  +-..+-...-|.++++||+-+|+-
T Consensus         8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~--i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_           8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHH--HHHHhCCCCCCeecHHHHHHHHHH
Confidence            3567778888743234699999999999999986553332  222344556699999999987754

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=92.71  E-value=0.29  Score=31.94  Aligned_cols=69  Identities=7%  Similarity=0.049  Sum_probs=51.0

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ......+.++|..|=......|+.+-+..++..|   |..+.+-.+=.+-..+-...=|.|+.+||+.-|.+
T Consensus        37 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          37 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            3456789999999965444699999999999888   55565554444445555566799999999987753

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.65  E-value=0.093  Score=33.91  Aligned_cols=62  Identities=18%  Similarity=0.176  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhh-cccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l-~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....++|+.+-....+.|+.+-+.+++...|++.+.   |--.|.+ -...-|.++++||+..|+-
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~---L~~i~~~~D~d~dG~L~~~EF~~am~L   73 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI---LGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHH---HHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHH---HHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            456678888744344699999999999999986543   3333433 4456699999999998874

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=92.60  E-value=0.27  Score=31.95  Aligned_cols=68  Identities=7%  Similarity=0.026  Sum_probs=51.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|+.|--.....|+.+.+.+++..|+..   +.+..+-.+-..+....=|.|+.+||++-|+.
T Consensus        38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            357788999999965445699999999999998764   34444444555556667799999999987764

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=92.49  E-value=0.22  Score=33.89  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|=......|+.+-+..+|..+|++.+++..+.  ..+-...=|.|+.+||+..|+.+
T Consensus       104 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f--~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHH--HHcCCCCCCCCcHHHHHHHHHHH
Confidence            456888898885433469999999999999999988876543  34555567999999999988764

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=92.41  E-value=0.27  Score=33.57  Aligned_cols=66  Identities=6%  Similarity=-0.093  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+..+|..|=......|+.+-+.+++..+|+...+-.+-.+-..+-...=|.|+.+||++-+..
T Consensus       104 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  169 (187)
T d1uhka1         104 RIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  169 (187)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            345777888874333469999999999999999877666666667777777899999999986654

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=0.11  Score=31.90  Aligned_cols=43  Identities=19%  Similarity=0.269  Sum_probs=37.0

Q ss_pred             CCCcchHHHHHHHHHHhC--------CCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            3 KLSRSNRDKLQQFVSITG--------ASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT~--------~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      .|++.|.+.|.+|.+..+        .+.....+||.+.+||++.|...+-
T Consensus         7 elt~~q~~~l~elr~~l~~~~~~~~~~dd~~LlRFLrAr~fdv~kA~~ml~   57 (75)
T d1olma1           7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLR   57 (75)
T ss_dssp             BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHCCCCHHHHHHHHH
Confidence            489999999999998753        3467899999999999999998874

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=92.18  E-value=0.22  Score=34.26  Aligned_cols=66  Identities=8%  Similarity=0.028  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.++|..|=-.....|+.+-+.++|..+|+.+.+-.+-.+-..+-...=|.|+.+||++-+..
T Consensus       106 ~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         106 REWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            345667888875434469999999999999999987777666666777777899999999987755

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.94  E-value=0.16  Score=34.12  Aligned_cols=119  Identities=8%  Similarity=0.109  Sum_probs=79.3

Q ss_pred             CCCcchHHHHHH-HHHH-----hC-CCHHHHHHHHHhCCCCchhh-hhhhh----ccCCCC------------------C
Q 031969            3 KLSRSNRDKLQQ-FVSI-----TG-ASEKAALQALKASDWHLEGA-FDVFY----SQPQSK------------------S   52 (150)
Q Consensus         3 ~l~~~~~~~i~~-F~~i-----T~-~~~~~A~~~L~~~~w~le~A-i~~f~----~~~~~~------------------~   52 (150)
                      +||..+.+.+++ |..+     +| .+...-+.+|++.+-++... +...+    .+..+.                  .
T Consensus         7 ~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (156)
T d1dtla_           7 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK   86 (156)
T ss_dssp             GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC----
T ss_pred             HCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccccc
Confidence            678877777764 7533     44 36777788888877666322 22222    222110                  1


Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ......|..+|..|-......|+.+-+.+++..+|..+.+-.+--+...+....=|.|+.++|++-|+.
T Consensus        87 ~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          87 GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             -CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            133566888899987644579999999999999999987777666666776666699999999987753

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=91.71  E-value=0.32  Score=32.84  Aligned_cols=65  Identities=12%  Similarity=0.003  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|=......|+.+-+.+++..+|++++++..+  --.+-...=|.|+.+||+..|...
T Consensus        93 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~--f~~~D~d~dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_          93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             HTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHH--HHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHH--HhhcCCCCCCcEeHHHHHHHHHHH
Confidence            34577788887554446999999999999999998876654  355556677999999999988764

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.62  E-value=0.19  Score=33.65  Aligned_cols=67  Identities=9%  Similarity=0.055  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ...+..+|..|=......|+.+-+.+++..+|++++.+..  +-..+-...=|.++.+||+..++.+.-
T Consensus       101 ~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~Ef~~~~~~~~~  167 (176)
T d1nyaa_         101 GPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAE--AFNQVDTNGNGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             HHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHH--HHHHHCCCCCCcEeHHHHHHHHHHHhc
Confidence            4567788988832233599999999999999998776553  344456666799999999999887654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=91.44  E-value=0.4  Score=30.72  Aligned_cols=66  Identities=9%  Similarity=-0.006  Sum_probs=48.7

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhhcCCC--CCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDLQVD--PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv~--ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|.+.++  +.|+.+-+.+++..++-.  +++-.+=-+-..+-...=|.|.=+||+.-+..+
T Consensus        14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            567889999976554  699999999999887532  332223345555677777999999999887664

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.37  E-value=0.98  Score=31.10  Aligned_cols=65  Identities=11%  Similarity=0.139  Sum_probs=52.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+...|..|-......|..+-+.+.+...|....+-.+-.+...+....-|.|+.++|+..+..
T Consensus        86 ~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          86 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            45566677775434469999999999999999998877777777777777899999999988765

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.5  Score=32.76  Aligned_cols=65  Identities=3%  Similarity=-0.064  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ...+..+|..|-...+..|+.+-+...+..+|+++.+..+=.|.....  .=|.++-++|+..+.++
T Consensus        69 ~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d--~~g~i~~~eFi~~~~~l  133 (165)
T d1k94a_          69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC--BTTBCBHHHHHHHHHHH
T ss_pred             cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC--CCCcCcHHHHHHHHHHH
Confidence            456777888886544579999999999999999986655444444443  34999999999988763

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.27  E-value=0.94  Score=29.71  Aligned_cols=69  Identities=14%  Similarity=0.055  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh-hcccccccccHHHHHHHhHHcCC
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSLGI  124 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~l~~  124 (150)
                      ...+..++..|.......+..+.....+.........-..+..|+. +-...-|.|++++|...+..+|.
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~  114 (146)
T d1lkja_          45 EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE  114 (146)
T ss_dssp             HHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence            3444444444443333445555555555444444333333333332 22334466666666666655555

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=91.15  E-value=0.43  Score=30.45  Aligned_cols=67  Identities=12%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             HHHHHHHHHhcCCCCC--ccchHHHHHHHhhcC-----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969           57 RHLEELYNRYKDPYLD--MILVDGITLLCNDLQ-----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d--~I~~dG~~~~~edLg-----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (150)
                      ..|..+|.+|++.+++  +|+.+.+.+++....     -..++..+--+-..+-...=|.|+=+||+.-|..+-
T Consensus         9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_           9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            4677899999887653  799999999997653     334455566666667777779999999999887753

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.93  E-value=0.28  Score=32.59  Aligned_cols=66  Identities=11%  Similarity=0.132  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ....|.+.|..|-......|+++-+.+++..+|..+.+-.+-.+...+....=|.|+-++|++.+.
T Consensus        79 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          79 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             hHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            456788889988544457999999999999999988766666666667666779999999998654

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=90.91  E-value=0.32  Score=30.84  Aligned_cols=66  Identities=15%  Similarity=0.143  Sum_probs=53.4

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhh---cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed---Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|.+.++  ++|+...+..+++.   +|..+++..+--+-..+-...=|+|.=+||+.-+..+
T Consensus         9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            457789999987655  47999999999987   7777777777777777777788999999999877664

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.80  E-value=0.64  Score=31.02  Aligned_cols=118  Identities=10%  Similarity=0.093  Sum_probs=76.2

Q ss_pred             CCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCc-hhhhhhhhcc----CCCCC------------------cC
Q 031969            4 LSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHL-EGAFDVFYSQ----PQSKS------------------LT   54 (150)
Q Consensus         4 l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~l-e~Ai~~f~~~----~~~~~------------------~~   54 (150)
                      ||+.|.+.++ .|..+    .|. +...-+.+|...+..+ +..+...+..    ..+.-                  ..
T Consensus        14 ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~   93 (162)
T d1topa_          14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK   93 (162)
T ss_dssp             SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccC
Confidence            5555543332 34444    232 3344567888888776 3444444422    11100                  01


Q ss_pred             CHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           55 DTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ....+.+.|..| |.+. ..|..+-+.+++...|..+.+..+--|-..+....=|.|+-+||++-++.+
T Consensus        94 ~~~~~~~aF~~~-D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  161 (162)
T d1topa_          94 SEEELANCFRIF-DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             cHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence            133456678777 4444 699999999999999999887777777777777777999999999888765

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=90.70  E-value=0.3  Score=33.97  Aligned_cols=66  Identities=14%  Similarity=0.054  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.|.++|+.|-......|+.+-+..++..+|++|.+..+-.+...+.....|.|+.++|+..+...
T Consensus        10 ~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   75 (182)
T d1s6ia_          10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL   75 (182)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhh
Confidence            457778887754334588888888888888888877766666667777777888888888766553

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.52  E-value=0.28  Score=33.71  Aligned_cols=67  Identities=7%  Similarity=-0.071  Sum_probs=45.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc-----HHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD-----IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped-----~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      .....+..+|+++++. +..|+.+-+.+.+..+|+.|..     -.+--+-..+....-|.|+-+||+..+..
T Consensus         4 ~~~~~~~~~F~~~~~~-dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~   75 (172)
T d1juoa_           4 QTQDPLYGYFAAVAGQ-DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV   75 (172)
T ss_dssp             CCCCTTHHHHHHHHTT-TTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHh
Confidence            3456688899999764 3599999999999999998642     12222333455666677777777765543

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=90.51  E-value=0.51  Score=31.53  Aligned_cols=65  Identities=14%  Similarity=0.247  Sum_probs=43.7

Q ss_pred             HHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~--d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +.+.+.|+.|-  +.....|+.+-+...+..||+.|....+-.+.+. -...-|.|+-++|+.-|..+
T Consensus         7 ~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~~~-~~~~~~~i~~~eFl~~~~~~   73 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEKSLPFEEFLPAYEGL   73 (152)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTTCC-SSTTSCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhhhh-hccccccccccccccccccc
Confidence            34666777763  2223589999999999999999876665544332 22335778888888877653

>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin carboxyl-terminal hydrolase 25
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.23  E-value=0.15  Score=32.06  Aligned_cols=41  Identities=32%  Similarity=0.320  Sum_probs=34.0

Q ss_pred             chHHHHHHHHHHhCCC-HHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            7 SNRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~-~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      .++-++.|.++|||.. ...-...|+.++.||..||.-.-+.
T Consensus        23 hqQ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~   64 (80)
T d1vdla_          23 HQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAK   64 (80)
T ss_dssp             CHHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCcHHHHHHHHHhcCCCHHHHHHHHhcC
Confidence            4667889999999997 5567889999999999999765444

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=90.04  E-value=0.71  Score=31.92  Aligned_cols=66  Identities=2%  Similarity=-0.072  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...+.+.|.+|-......|+.+-+.+++..+|..+.+-.+-.+...+-...-|.|+.+||+.-+..
T Consensus        83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~  148 (182)
T d1y1xa_          83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  148 (182)
T ss_dssp             HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence            355667788875434469999999999999999988877778888888888999999999997754

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=89.92  E-value=0.46  Score=31.47  Aligned_cols=68  Identities=10%  Similarity=0.052  Sum_probs=51.8

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ......|.+.|..|-......|+.+-+.+.+..+|..+.+-.+-.|...+... =|.|+-++|++-|.+
T Consensus        72 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             SCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            34567899999999543446999999999999999887665555555556544 499999999987653

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.41  E-value=0.55  Score=32.03  Aligned_cols=64  Identities=8%  Similarity=-0.014  Sum_probs=38.8

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      -+..+|+.|-......|+.+..+..+.-+.-.+.+..+=.+...+....-|.|+++++...+..
T Consensus        52 ~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~  115 (178)
T d1s6ca_          52 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  115 (178)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHH
Confidence            3466777775433457777777777765554454444433444444556688888887776554

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.36  E-value=0.31  Score=31.30  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=36.8

Q ss_pred             CCCcchHHHHHHHHHHh-------CCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969            3 KLSRSNRDKLQQFVSIT-------GASEKAALQALKASDWHLEGAFDVFY   45 (150)
Q Consensus         3 ~l~~~~~~~i~~F~~iT-------~~~~~~A~~~L~~~~w~le~Ai~~f~   45 (150)
                      .|++.|++.+.+|.+..       ..+.....+||...+||++.|+..+-
T Consensus        25 ~Lt~~q~~~L~elr~~l~~~~~~~~~DD~~llRfLrAr~fd~~~a~~ml~   74 (93)
T d1auaa1          25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFE   74 (93)
T ss_dssp             TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHccCCHHHHHHHHH
Confidence            48899999999998854       23677999999999999999998884

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=89.25  E-value=1.9  Score=28.22  Aligned_cols=67  Identities=3%  Similarity=-0.201  Sum_probs=51.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....|.+.|..|-......|+.+=+.+.+..+|..+.+-.+-.+...+....-|.|+-.+|++-|+.
T Consensus        75 ~~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          75 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             hHHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            3467888888884434468999999999999998877666666666666667789999999987754

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.95  E-value=0.63  Score=30.63  Aligned_cols=64  Identities=13%  Similarity=0.090  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      ...+.+.|..|=......|.++-+.+++..+|..+.+-.+--+...+. ..=|.|+-++|++-|+
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~  145 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS  145 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence            467888999886544579999999999999999986655555555555 5569999999997664

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.86  E-value=0.87  Score=28.60  Aligned_cols=67  Identities=12%  Similarity=0.180  Sum_probs=44.6

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC--CcHHHHHHHHhhccc----ccccccHHHHHHHhHH
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQS  121 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~p--ed~~~LvLa~~l~a~----~~g~~tr~eF~~g~~~  121 (150)
                      +.++.|..+|.+|.+. .+.|+++.+.+|+.+--=++  ....+.-|-.+....    .-|.+|-++|+.-+..
T Consensus         5 ~~R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1           5 TQRAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             SCCHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             CccHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            3568899999999873 46899999999998653222  222233333333321    2377999999887654

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.71  E-value=0.65  Score=32.03  Aligned_cols=16  Identities=19%  Similarity=0.218  Sum_probs=8.2

Q ss_pred             HHHHHHHHHhCCCHHH
Q 031969           10 DKLQQFVSITGASEKA   25 (150)
Q Consensus        10 ~~i~~F~~iT~~~~~~   25 (150)
                      +.+++....|..++..
T Consensus         8 e~i~~l~~~t~fs~~E   23 (187)
T d1g8ia_           8 EVVEELTRKTYFTEKE   23 (187)
T ss_dssp             HHHHHHHHTSSSCHHH
T ss_pred             HHHHHHHHhcCCCHHH
Confidence            4455555555555443

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.86  E-value=0.58  Score=32.62  Aligned_cols=115  Identities=6%  Similarity=-0.066  Sum_probs=69.5

Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHhC----CCCchhhhhhhhccC--CCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 031969            7 SNRDKLQQFVSITGASEKAALQALKAS----DWHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (150)
Q Consensus         7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~----~w~le~Ai~~f~~~~--~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~   80 (150)
                      -.++.++++...|+-++.....+.+..    +. =..-.+.|...-  -........-+..+|+.+-...+..|+.+-..
T Consensus         8 l~~e~l~~l~~~t~f~~~ei~~l~~~F~~~~~~-G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~   86 (201)
T d1omra_           8 LSKEILEELQLNTKFTEEELSSWYQSFLKECPS-GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYV   86 (201)
T ss_dssp             HHHHHHHHHGGGCSSCHHHHHHHHHHHHHHCTT-SEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHH
T ss_pred             CCHHHHHHHHHhCCCCHHHHHHHHHHHHHHCcC-CCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHH
Confidence            345678999999999988766655442    11 011222222110  00112334556788888854344689999988


Q ss_pred             HHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        81 ~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..+..+.-.+.+-.+-.+-..+-...-|.|+++||...++.+
T Consensus        87 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~  128 (201)
T d1omra_          87 IALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI  128 (201)
T ss_dssp             HHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHH
Confidence            888777665544333333344456677999999998888774

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.42  E-value=1.3  Score=29.03  Aligned_cols=62  Identities=10%  Similarity=-0.050  Sum_probs=38.5

Q ss_pred             HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+.+.|+.|-......|+++.+...+..||..|.....+-  . +-...-|.++-++|+..|...
T Consensus         8 el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~--~-~~~~~~g~i~~~eF~~~~~~~   69 (145)
T d2mysb_           8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELD--A-MIKEASGPINFTVFLTMFGEK   69 (145)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHH--H-HHHhccCceeechhhhhhhhc
Confidence            4556688875433468888888888888887654433322  1 112344677777777776553

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.28  E-value=1  Score=29.53  Aligned_cols=66  Identities=6%  Similarity=-0.034  Sum_probs=46.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ....|.+.|..|-......|+.+-+.+++..+|..+.+-.+=.+.. .-...=|.|+-++|++-+-+
T Consensus        79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHhc
Confidence            4566888999985544579999999999999997764433322222 22334599999999987644

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=86.98  E-value=2.7  Score=27.35  Aligned_cols=61  Identities=11%  Similarity=0.194  Sum_probs=41.8

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.+.++|+.|=......|+.+-+...+..||++|....+-.+   +. ..-|.++-++|+..+..
T Consensus         7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~---~~-~~~~~i~~~eF~~~~~~   67 (142)
T d1wdcb_           7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAM---LK-EAPGPLNFTMFLSIFSD   67 (142)
T ss_dssp             HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHH---HT-TSSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHH---HH-hccCccccccccccccc
Confidence            456777888843234689999999999999999876543322   21 23477888888877654

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=86.72  E-value=1.2  Score=28.23  Aligned_cols=60  Identities=12%  Similarity=0.016  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (150)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (150)
                      ...+..+|..|-......|.++-+..++..+|++    .+.-+...+-.-.=|.||.+||++-|
T Consensus        74 ~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~~~----~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCH----HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccccccccccCCcccHHHHHHHHHhcCcH----HHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            4668889988865445699999999999988753    22223345555666999999999754

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.60  E-value=1.1  Score=30.98  Aligned_cols=112  Identities=10%  Similarity=-0.028  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHH----HhCC-CCchhhhhhhhccC--CCCCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969            9 RDKLQQFVSITGASEKAALQAL----KASD-WHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L----~~~~-w~le~Ai~~f~~~~--~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~   81 (150)
                      ++.+++++.-|+-++..-..+.    +.++ ..+  ..+.|..--  -........-++.+|+.+-......|+.+-...
T Consensus        10 ~e~l~~l~~~t~fs~~Ei~~l~~~F~~~~~~G~i--~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~   87 (190)
T d1fpwa_          10 KDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQL--AREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFIT   87 (190)
T ss_dssp             THHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCE--EHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCc--cHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHH
Confidence            3558888888888876644333    2221 111  222221110  001122233457788877443346899999999


Q ss_pred             HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        82 ~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .+..++..+.+-.+-.+-..+-...-|.|+++|+..-++.+
T Consensus        88 ~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~  128 (190)
T d1fpwa_          88 VLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV  128 (190)
T ss_dssp             HHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            99888877665554444455566777999999998888775

>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Toll-interacting protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.94  E-value=0.42  Score=28.46  Aligned_cols=44  Identities=11%  Similarity=0.164  Sum_probs=37.3

Q ss_pred             CCcchHHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969            4 LSRSNRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ   47 (150)
Q Consensus         4 l~~~~~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~   47 (150)
                      ++...++.|+++.++. +.++.+-+..|+++++|++.||+.-.+-
T Consensus         5 ~s~~~Ee~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~M   49 (59)
T d1wgla_           5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQM   49 (59)
T ss_dssp             SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred             cCcCcHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            3455677899999987 5688899999999999999999998865

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.61  E-value=2  Score=29.01  Aligned_cols=113  Identities=10%  Similarity=-0.018  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhC----CCCchhhhhhhhccC--CCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHH
Q 031969            9 RDKLQQFVSITGASEKAALQALKAS----DWHLEGAFDVFYSQP--QSKSLTDTRHLEELYNRYKDPYLDMILVDGITLL   82 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~----~w~le~Ai~~f~~~~--~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~   82 (150)
                      .+.|++++..|+.|+..-..+.+..    + +=..-...|...-  .........-+.++|+.+-...+..|+.+-...+
T Consensus         6 ~~~~~~L~~~t~fs~~ei~~l~~~F~~~~~-~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~   84 (181)
T d1bjfa_           6 PEVMQDLLESTDFTEHEIQEWYKGFLRDCP-SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIA   84 (181)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHST-TSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHhhCC-CCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHH
Confidence            4779999999999988755554442    1 0001111221110  0111223345678888886544468988888888


Q ss_pred             HhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        83 ~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      +..+--.+..-.+-.+-.++-...-|.|+++||...++.+
T Consensus        85 ~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~  124 (181)
T d1bjfa_          85 LSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI  124 (181)
T ss_dssp             HHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHH
Confidence            8776544433333344445556677999999999888764

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=85.44  E-value=1.9  Score=28.42  Aligned_cols=100  Identities=5%  Similarity=-0.085  Sum_probs=64.4

Q ss_pred             CHHHHHHHHHhCCCCch-hhhhhhhc---cCCC----------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969           22 SEKAALQALKASDWHLE-GAFDVFYS---QPQS----------------KSLTDTRHLEELYNRYKDPYLDMILVDGITL   81 (150)
Q Consensus        22 ~~~~A~~~L~~~~w~le-~Ai~~f~~---~~~~----------------~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~   81 (150)
                      +...-+.+|++-+.++. .-+..+..   +..+                ........|.+.|..|=......|+.+-+.+
T Consensus        27 ~~~el~~~l~~lG~~~t~~e~~~~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~  106 (152)
T d1wdcc_          27 DAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH  106 (152)
T ss_dssp             EGGGHHHHHHHTTCCCCHHHHHHTTCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHH
T ss_pred             CHHHHHHHHHHhccCccHhhhhhhhhhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHH
Confidence            45556778888777762 22233321   1111                1123456788888888544447999999999


Q ss_pred             HHhhcCCCCCcHHHHHHHHhhccc--ccccccHHHHHHHhHH
Q 031969           82 LCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQS  121 (150)
Q Consensus        82 ~~edLgv~ped~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~  121 (150)
                      .+..+|..+.+-.+=.+-..+...  .-|.|+-++|++-|..
T Consensus       107 ~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~  148 (152)
T d1wdcc_         107 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  148 (152)
T ss_dssp             HHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence            999999998765554444444432  3489999999987653

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=84.91  E-value=1.8  Score=27.34  Aligned_cols=63  Identities=11%  Similarity=0.085  Sum_probs=46.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCC---------CCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQV---------DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv---------~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|++|.+. .+.|+.+-+.+++..++-         +|+.+..  +...+-...=|.|+-+||+.-|.++
T Consensus        10 ~~l~~~F~~y~~~-dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~--~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_          10 IGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLAD--VFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGT--HHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCcccHHHHHHHHHHHccccccccccCCHHHHHH--HHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            5677899999764 469999999999988753         3333322  3355666777999999999988775

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=84.35  E-value=2.6  Score=27.66  Aligned_cols=65  Identities=8%  Similarity=0.006  Sum_probs=46.7

Q ss_pred             HHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.|.++|+.|-.+. +..|+.+-+...+..||+.+....+..+.+.+.....|.++.++|......
T Consensus        14 ~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (156)
T d1dtla_          14 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   79 (156)
T ss_dssp             HHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhh
Confidence            45666677775433 248888888888888888888777777777777777777777777765443

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.24  E-value=1.9  Score=29.13  Aligned_cols=63  Identities=8%  Similarity=0.125  Sum_probs=45.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ..+...|.+|-...+..|+.+-+.+.+..+|..+.. ..-....  .-...-|.|+.+||+..+..
T Consensus        77 ~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~--~d~d~~G~i~~~EF~~~~~~  140 (173)
T d1alva_          77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR--RYSDEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH--HHTCSSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhc--cccCCCCeEeHHHHHHHHHH
Confidence            456667777754444699999999999999998753 3333332  22356699999999998865

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=84.03  E-value=2.9  Score=26.00  Aligned_cols=66  Identities=14%  Similarity=0.080  Sum_probs=48.4

Q ss_pred             HHHHHHHHHhcCCCC--CccchHHHHHHHhhc-----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edL-----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|.+.++  +.|+.+.+.+++...     +-.++...+=-+...+....=|+|.=+||+.-+..+
T Consensus         8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l   80 (87)
T d1e8aa_           8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   80 (87)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            467789999987654  579999999999763     222333445555666777777999999999877664

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.18  E-value=3.7  Score=28.10  Aligned_cols=67  Identities=9%  Similarity=0.051  Sum_probs=48.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-------CCCCCcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-------gv~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      ...++..+|.-|--.....|+.+-+.+++..+       .++.+.+.-+|  +-..+....-|.||.+||.+.+.+
T Consensus        93 ~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_          93 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            35789999999943334699999999999876       24445454443  334556667799999999998776

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.53  E-value=1.2  Score=30.23  Aligned_cols=64  Identities=13%  Similarity=0.105  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH--------HHHHHHHhhcccccccccHHHHHHHhHH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI--------VMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~--------~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (150)
                      +.+.++|+++.+. +..|+..-+.+.+..+|..|.+.        .+-.+-..+....-|.|+-++|+..|..
T Consensus         4 ~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~   75 (173)
T d1alva_           4 RQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN   75 (173)
T ss_dssp             HHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh
Confidence            5678899999753 46899999999998887765332        1223334455566688888888877754

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.64  E-value=5.5  Score=26.56  Aligned_cols=73  Identities=11%  Similarity=0.063  Sum_probs=52.9

Q ss_pred             CCHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHHcCCCC
Q 031969           54 TDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (150)
                      .+...|..||..|.+-++ ..|+.+-..+++..++..+.. ..+=-|...+....-|.++-++|+.++..+.-.+
T Consensus        18 fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~   92 (181)
T d1bjfa_          18 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK   92 (181)
T ss_dssp             CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred             CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhc
Confidence            356778888888875433 589999999999998877643 3333345555666668999999999988875544

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=81.39  E-value=1.6  Score=27.38  Aligned_cols=65  Identities=6%  Similarity=0.122  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhc-----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..|..+|.+|-.. .+.|+.+-+.+.+..+     +-.+....+=-+-..+-...=|.|+-+||+.-+..+
T Consensus         9 e~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            5688899999753 4699999999999774     333333333334455666677999999999877664

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.66  E-value=5.7  Score=26.86  Aligned_cols=69  Identities=10%  Similarity=0.003  Sum_probs=51.1

Q ss_pred             CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      .....+.++|+.|-......|+.......+..+.-.+.+-.+-.+-..+-...-|.|++++|...+..+
T Consensus        55 ~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~  123 (189)
T d1jbaa_          55 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI  123 (189)
T ss_dssp             TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHH
Confidence            356788999999876555799999999999888766544443333444556677999999999877653

>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Cbl-interacting protein p70, STS1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.54  E-value=1.1  Score=25.55  Aligned_cols=36  Identities=22%  Similarity=0.298  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHhCCC-Cchhhhhhhh
Q 031969            9 RDKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFY   45 (150)
Q Consensus         9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~   45 (150)
                      ...|.+.++ .|-++..|++-|...+. ++|.|++=-|
T Consensus        13 ~~~l~~L~~-MGF~~~~a~~AL~~t~n~~ve~A~~WLl   49 (51)
T d2cpwa1          13 GSALDVLLS-MGFPRARAQKALASTGGRSVQTACDWLF   49 (51)
T ss_dssp             CCHHHHHHH-HTCCHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHHCCCCHHHHHHHHH
Confidence            346788887 79999999999999776 8999998554

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=80.14  E-value=1.5  Score=28.78  Aligned_cols=60  Identities=12%  Similarity=0.115  Sum_probs=37.4

Q ss_pred             HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (150)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (150)
                      +...+.|+.|-......|+.+-+...+..||++|..-.+--    +-...-|.++-++|+.-+.
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~   64 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLN   64 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhh
Confidence            45566777774323358888888888888888876544321    2223346677777766554

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.07  E-value=5.8  Score=26.42  Aligned_cols=70  Identities=11%  Similarity=0.146  Sum_probs=49.8

Q ss_pred             cCCHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969           53 LTDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (150)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (150)
                      ..++..|..||.+|++.++ ..|+.+-..+++..++..+.. ...=.|-..+-...-|.|+.+||+.++..+
T Consensus         9 ~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~   80 (178)
T d1s6ca_           9 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL   80 (178)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHH
Confidence            3467889999988864333 489999999999988776432 222234455566667999999999888654