Citrus Sinensis ID: 032036
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 148 | ||||||
| 224100141 | 374 | predicted protein [Populus trichocarpa] | 0.959 | 0.379 | 0.697 | 3e-60 | |
| 225424651 | 388 | PREDICTED: GDSL esterase/lipase At3g2643 | 0.993 | 0.378 | 0.659 | 2e-58 | |
| 296081362 | 449 | unnamed protein product [Vitis vinifera] | 0.993 | 0.327 | 0.659 | 2e-58 | |
| 255578351 | 390 | Alpha-L-fucosidase 2 precursor, putative | 0.993 | 0.376 | 0.632 | 7e-56 | |
| 356506192 | 381 | PREDICTED: LOW QUALITY PROTEIN: GDSL est | 0.945 | 0.367 | 0.685 | 2e-55 | |
| 356571812 | 393 | PREDICTED: GDSL esterase/lipase At3g2643 | 0.945 | 0.356 | 0.685 | 2e-55 | |
| 224107753 | 388 | predicted protein [Populus trichocarpa] | 0.966 | 0.368 | 0.636 | 4e-53 | |
| 225424649 | 383 | PREDICTED: GDSL esterase/lipase At3g2643 | 0.959 | 0.370 | 0.629 | 1e-51 | |
| 449434989 | 384 | PREDICTED: GDSL esterase/lipase At3g2643 | 0.959 | 0.369 | 0.619 | 2e-51 | |
| 359492387 | 392 | PREDICTED: esterase [Vitis vinifera] | 0.952 | 0.359 | 0.626 | 1e-50 |
| >gi|224100141|ref|XP_002311760.1| predicted protein [Populus trichocarpa] gi|222851580|gb|EEE89127.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 126/142 (88%)
Query: 2 AAQIDDHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61
AAQID +GCATPFN+V++FFN LK AVVQLRKDLP AA+TYVDI+S+K++L TQAKK G
Sbjct: 227 AAQIDKYGCATPFNEVSQFFNHGLKEAVVQLRKDLPQAAITYVDIYSLKYTLTTQAKKFG 286
Query: 62 FENPLLACCGHGGKYNYDKNRKCGSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANK 121
F+ P +ACCGHGGKYNY+ R+CG+K+TVNG E+++A SCK P+VRI WDGVH+TEAANK
Sbjct: 287 FKQPFVACCGHGGKYNYNSQRRCGAKITVNGTEVLIANSCKDPSVRIIWDGVHFTEAANK 346
Query: 122 WVYDQIINGSYSDPPIPMEMAC 143
W++ QI+NGS+SDPP+P++MAC
Sbjct: 347 WIFQQIVNGSFSDPPVPLKMAC 368
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424651|ref|XP_002282372.1| PREDICTED: GDSL esterase/lipase At3g26430-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296081362|emb|CBI16795.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255578351|ref|XP_002530042.1| Alpha-L-fucosidase 2 precursor, putative [Ricinus communis] gi|223530458|gb|EEF32342.1| Alpha-L-fucosidase 2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356506192|ref|XP_003521871.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase At3g26430-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356571812|ref|XP_003554066.1| PREDICTED: GDSL esterase/lipase At3g26430-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224107753|ref|XP_002314590.1| predicted protein [Populus trichocarpa] gi|222863630|gb|EEF00761.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225424649|ref|XP_002285512.1| PREDICTED: GDSL esterase/lipase At3g26430 [Vitis vinifera] gi|296081363|emb|CBI16796.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449434989|ref|XP_004135278.1| PREDICTED: GDSL esterase/lipase At3g26430-like [Cucumis sativus] gi|449520693|ref|XP_004167368.1| PREDICTED: GDSL esterase/lipase At3g26430-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359492387|ref|XP_002285855.2| PREDICTED: esterase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 148 | ||||||
| TAIR|locus:2079286 | 380 | AT3G26430 "AT3G26430" [Arabido | 0.959 | 0.373 | 0.598 | 1.4e-48 | |
| UNIPROTKB|Q7Y1X1 | 391 | Q7Y1X1 "Esterase" [Hevea brasi | 0.945 | 0.358 | 0.556 | 1.1e-41 | |
| TAIR|locus:2008535 | 372 | FXG1 "AT1G67830" [Arabidopsis | 0.871 | 0.346 | 0.503 | 1.3e-34 | |
| TAIR|locus:2145693 | 389 | AT5G14450 "AT5G14450" [Arabido | 0.912 | 0.347 | 0.474 | 6e-32 | |
| TAIR|locus:2027594 | 373 | AT1G56670 "AT1G56670" [Arabido | 0.885 | 0.351 | 0.397 | 3.6e-25 | |
| TAIR|locus:2096269 | 379 | AT3G05180 "AT3G05180" [Arabido | 0.885 | 0.345 | 0.413 | 3.6e-25 | |
| TAIR|locus:2012270 | 370 | AT1G09390 "AT1G09390" [Arabido | 0.871 | 0.348 | 0.417 | 7.6e-25 | |
| TAIR|locus:2098048 | 365 | AT3G62280 "AT3G62280" [Arabido | 0.837 | 0.339 | 0.410 | 4.3e-22 | |
| TAIR|locus:2018753 | 393 | AT1G28600 "AT1G28600" [Arabido | 0.804 | 0.302 | 0.418 | 1.7e-21 | |
| TAIR|locus:2124993 | 382 | AT4G01130 "AT4G01130" [Arabido | 0.945 | 0.366 | 0.338 | 5.2e-21 |
| TAIR|locus:2079286 AT3G26430 "AT3G26430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 85/142 (59%), Positives = 117/142 (82%)
Query: 2 AAQIDDHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61
A+QID+HGCA P N++AR++NS LK V++LRK+L AA TYVDI+S+K +LITQAKKLG
Sbjct: 237 ASQIDNHGCAIPRNEIARYYNSELKRRVIELRKELSEAAFTYVDIYSIKLTLITQAKKLG 296
Query: 62 FENPLLACCGHGGKYNYDKNRKCGSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANK 121
F PL+ACCGHGGKYN++K KCG+KV + GKEI++AKSC + R++WDG+H+TE N
Sbjct: 297 FRYPLVACCGHGGKYNFNKLIKCGAKVMIKGKEIVLAKSCNDVSFRVSWDGIHFTETTNS 356
Query: 122 WVYDQIINGSYSDPPIPMEMAC 143
W++ QI +G++SDPP+P++ AC
Sbjct: 357 WIFQQINDGAFSDPPLPVKSAC 378
|
|
| UNIPROTKB|Q7Y1X1 Q7Y1X1 "Esterase" [Hevea brasiliensis (taxid:3981)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008535 FXG1 "AT1G67830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2145693 AT5G14450 "AT5G14450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027594 AT1G56670 "AT1G56670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096269 AT3G05180 "AT3G05180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2012270 AT1G09390 "AT1G09390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098048 AT3G62280 "AT3G62280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018753 AT1G28600 "AT1G28600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124993 AT4G01130 "AT4G01130" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 148 | |||
| cd01837 | 315 | cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase | 2e-39 | |
| PLN03156 | 351 | PLN03156, PLN03156, GDSL esterase/lipase; Provisio | 3e-10 |
| >gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 2e-39
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 6 DDHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENP 65
D GC N++AR FN++LK + +LR++LP A Y DI++ LI K GFEN
Sbjct: 202 DGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENT 261
Query: 66 LLACCGHGGKYNYDKNRKCGSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYD 125
L ACCG GG CGS V C P+ + WDGVH TEAAN+ + D
Sbjct: 262 LKACCGTGGPEGGLLCNPCGSTV------------CPDPSKYVFWDGVHPTEAANRIIAD 309
Query: 126 QIINGS 131
+++G
Sbjct: 310 ALLSGP 315
|
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315 |
| >gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 148 | |||
| PLN03156 | 351 | GDSL esterase/lipase; Provisional | 99.97 | |
| cd01837 | 315 | SGNH_plant_lipase_like SGNH_plant_lipase_like, a p | 99.97 | |
| cd01847 | 281 | Triacylglycerol_lipase_like Triacylglycerol lipase | 99.94 | |
| cd01846 | 270 | fatty_acyltransferase_like Fatty acyltransferase-l | 99.94 | |
| PRK15381 | 408 | pathogenicity island 2 effector protein SseJ; Prov | 99.92 | |
| COG3240 | 370 | Phospholipase/lecithinase/hemolysin [Lipid metabol | 99.82 | |
| PF00657 | 234 | Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter | 99.32 | |
| cd01823 | 259 | SEST_like SEST_like. A family of secreted SGNH-hyd | 97.48 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 97.41 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 97.37 | |
| cd01828 | 169 | sialate_O-acetylesterase_like2 sialate_O-acetylest | 97.1 | |
| cd00229 | 187 | SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, | 96.96 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 96.96 | |
| cd04506 | 204 | SGNH_hydrolase_YpmR_like Members of the SGNH-hydro | 96.82 | |
| cd01844 | 177 | SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG | 96.8 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 96.69 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 96.55 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 96.51 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 96.48 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 96.37 | |
| cd01830 | 204 | XynE_like SGNH_hydrolase subfamily, similar to the | 95.93 | |
| cd01840 | 150 | SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG | 95.71 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 95.66 | |
| PRK10528 | 191 | multifunctional acyl-CoA thioesterase I and protea | 95.62 | |
| cd01839 | 208 | SGNH_arylesterase_like SGNH_hydrolase subfamily, s | 95.43 | |
| cd01822 | 177 | Lysophospholipase_L1_like Lysophospholipase L1-lik | 95.18 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.16 | |
| cd01824 | 288 | Phospholipase_B_like Phospholipase-B_like. This su | 95.14 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.13 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 95.12 | |
| cd01835 | 193 | SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG | 95.06 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 94.97 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 94.92 | |
| cd01826 | 305 | acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l | 93.48 | |
| PF13472 | 179 | Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami | 92.84 | |
| COG2755 | 216 | TesA Lysophospholipase L1 and related esterases [A | 91.2 | |
| PF14606 | 178 | Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami | 90.78 |
| >PLN03156 GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=216.97 Aligned_cols=114 Identities=25% Similarity=0.527 Sum_probs=103.8
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCCCcccccCCCccccccCccCCC
Q 032036 6 DDHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPLLACCGHGGKYNYDKNRKCG 85 (148)
Q Consensus 6 d~~~C~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n~~~~Cc~~gg~~~~~~~~~C~ 85 (148)
+..+|.+.+|.++..||++|++++++|++++|+++|+++|+|+++.++++||++|||++++.+|||.| .|+ ....|+
T Consensus 233 ~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g-~~~--~~~~C~ 309 (351)
T PLN03156 233 GGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATG-MFE--MGYLCN 309 (351)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCC-CCC--CccccC
Confidence 56789999999999999999999999999999999999999999999999999999999999999965 665 467898
Q ss_pred CccccCCcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhCC
Q 032036 86 SKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIINGS 131 (148)
Q Consensus 86 ~~~~~~g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~~ 131 (148)
+. ... .|++|++|+|||++|||+++|++||+.++++.
T Consensus 310 ~~--------~~~-~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 310 RN--------NPF-TCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred CC--------CCC-ccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 63 024 89999999999999999999999999998763
|
|
| >cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK15381 pathogenicity island 2 effector protein SseJ; Provisional | Back alignment and domain information |
|---|
| >COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] | Back alignment and domain information |
|---|
| >cd01823 SEST_like SEST_like | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE | Back alignment and domain information |
|---|
| >cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional | Back alignment and domain information |
|---|
| >cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A | Back alignment and domain information |
|---|
| >cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01824 Phospholipase_B_like Phospholipase-B_like | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family | Back alignment and domain information |
|---|
| >PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A | Back alignment and domain information |
|---|
| >COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 148 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 5e-09
Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 18/141 (12%)
Query: 9 GCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPLLA 68
+ ++ FN+ L A + Q ++ ++I + + G
Sbjct: 210 PLQPFASQLSGTFNAELTAQLSQAGANV-----IPLNIPLLLKEGMANPASFGLAADQNL 264
Query: 69 CCGHGGKYNYDKNRKCGSKVTVNGK-EIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQI 127
C S + S P+ + D VH T + + D
Sbjct: 265 IGT------------CFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYT 312
Query: 128 INGSYSDPPIPMEMACRVMDH 148
+ + + +
Sbjct: 313 YSLLSAPWELTLLPEMAHGTL 333
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 148 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 99.92 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 97.75 | |
| 3mil_A | 240 | Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola | 97.71 | |
| 2hsj_A | 214 | Putative platelet activating factor; structr genom | 97.66 | |
| 1fxw_F | 229 | Alpha2, platelet-activating factor acetylhydrolase | 97.61 | |
| 3rjt_A | 216 | Lipolytic protein G-D-S-L family; PSI-biology, mid | 97.45 | |
| 2vpt_A | 215 | Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos | 97.4 | |
| 1es9_A | 232 | PAF-AH, platelet-activating factor acetylhydrolase | 97.34 | |
| 1esc_A | 306 | Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. | 97.29 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 97.05 | |
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.93 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 96.56 | |
| 1vjg_A | 218 | Putative lipase from the G-D-S-L family; structura | 96.27 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 96.21 | |
| 3hp4_A | 185 | GDSL-esterase; psychrotrophic, monoethylphosphonat | 96.09 | |
| 3skv_A | 385 | SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr | 96.03 | |
| 1ivn_A | 190 | Thioesterase I; hydrolase, protease; 1.90A {Escher | 95.85 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 95.84 | |
| 2wao_A | 341 | Endoglucanase E; plant cell WALL degradation, carb | 95.8 | |
| 2q0q_A | 216 | ARYL esterase; SGNH hydrolase, oligomeric enzyme, | 95.49 | |
| 2waa_A | 347 | Acetyl esterase, xylan esterase, putative, AXE2C; | 95.42 | |
| 3bzw_A | 274 | Putative lipase; protein structure initiative II, | 94.76 | |
| 2w9x_A | 366 | AXE2A, CJCE2B, putative acetyl xylan esterase; car | 94.17 | |
| 1k7c_A | 233 | Rhamnogalacturonan acetylesterase; N-linked glycos | 92.82 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 92.07 | |
| 4i8i_A | 271 | Hypothetical protein; 5-stranded beta sheet flanke | 87.85 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-26 Score=197.82 Aligned_cols=118 Identities=18% Similarity=0.203 Sum_probs=99.0
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCCCc--ccccCCCccccccCccCC
Q 032036 7 DHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPL--LACCGHGGKYNYDKNRKC 84 (148)
Q Consensus 7 ~~~C~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n~~--~~Cc~~gg~~~~~~~~~C 84 (148)
..+|.+.+|.++..||.+|+++|++|+ .+|+++|+|+++.++++||++|||+++. ++||+.| ..|
T Consensus 208 ~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g--------~~C 274 (632)
T 3kvn_X 208 GGPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSG--------NGC 274 (632)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSC--------TTS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCC--------Ccc
Confidence 468999999999999999999999995 4899999999999999999999999864 6999865 268
Q ss_pred CCccccCCcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhCCCCCCCCchhhhhc
Q 032036 85 GSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIINGSYSDPPIPMEMACR 144 (148)
Q Consensus 85 ~~~~~~~g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~~~~~~p~~~~~~~~ 144 (148)
++.... + ... +|+||++|+|||++||||++|++||+.++++. ..|+++++|..
T Consensus 275 ~~~~~~-~---~~~-~C~~~~~y~fwD~~HpTe~~~~~ia~~~~~~~--~~P~~~~~l~~ 327 (632)
T 3kvn_X 275 TMNPTY-G---ING-STPDPSKLLFNDSVHPTITGQRLIADYTYSLL--SAPWELTLLPE 327 (632)
T ss_dssp CBCTTT-S---TTS-SSCCGGGCSBSSSSCBCHHHHHHHHHHHHHHH--HTHHHHTTHHH
T ss_pred CCcccc-c---ccc-cCCCccceEEecCCCCHHHHHHHHHHHHHhcc--CCCccHHHHHH
Confidence 763110 1 024 89999999999999999999999999999863 24577777653
|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
| >3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 | Back alignment and structure |
|---|
| >1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A | Back alignment and structure |
|---|
| >3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* | Back alignment and structure |
|---|
| >1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A | Back alignment and structure |
|---|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 | Back alignment and structure |
|---|
| >3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} | Back alignment and structure |
|---|
| >1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* | Back alignment and structure |
|---|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* | Back alignment and structure |
|---|
| >2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* | Back alignment and structure |
|---|
| >2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} | Back alignment and structure |
|---|
| >3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} | Back alignment and structure |
|---|
| >1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 148 | |||
| d1esca_ | 302 | Esterase {Streptomyces scabies [TaxId: 1930]} | 98.32 | |
| d2hsja1 | 211 | Uncharacterized protein SP1450 {Streptococcus pneu | 96.7 | |
| d1k7ca_ | 233 | Rhamnogalacturonan acetylesterase {Fungus (Aspergi | 96.61 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 96.51 | |
| d1fxwf_ | 212 | Platelet-activating factor acetylhydrolase {Cow (B | 96.22 | |
| d1yzfa1 | 195 | Lipase/acylhydrolase {Enterococcus faecalis [TaxId | 96.06 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.05 | |
| d1es9a_ | 212 | Platelet-activating factor acetylhydrolase {Cow (B | 95.93 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 95.88 | |
| d1vjga_ | 201 | Hypothetical protein alr1529 {Nostoc sp. pcc 7120 | 95.58 | |
| d1jrla_ | 179 | Thioesterase I, TAP {Escherichia coli [TaxId: 562] | 95.45 |
| >d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: Esterase domain: Esterase species: Streptomyces scabies [TaxId: 1930]
Probab=98.32 E-value=3.1e-06 Score=63.32 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEecc
Q 032036 13 PFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIF 47 (148)
Q Consensus 13 ~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 47 (148)
.+......+-..|.+++++++++.|+.+|+++..+
T Consensus 150 ~~~~~~~~~~~~l~~~~~~i~~~~p~a~iv~~~y~ 184 (302)
T d1esca_ 150 WLDDQFERVGAELEELLDRIGYFAPDAKRVLVGYP 184 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCCCCeEEEecCc
Confidence 35556778889999999999999999999998654
|
| >d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} | Back information, alignment and structure |
|---|
| >d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|