Citrus Sinensis ID: 032056

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MLKSPLLLSILLVLIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDGHKSAA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccEEEEEEccccEEEEEEccEEEEEEccccEEEEEccEEEEEEEccccccccccEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccEEEEEcccccEEEEEEcccEEEEEccccEEEEEEcEEEEEEEcccEccEcEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEccccHHHcccccccccccccc
Coil and Loop (DISEMBL)
MLKSPLLLSILLVLiplsssdpnpptlahaeltnygfpigllpvsvqshtlnqtsGEFFVHlggacrltlppdnylatysNKIRGKIEQGRIAELDGIRVRAFFKWWAITgirssgdnLVFEVGMVTakypsknfdespecdghksaa
Flexible Loop (DISEMBL)
MLKSPLLLSILLVLIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITgirssgdnlVFEVGMVTAKypsknfdespecdghksaa
Low Complexity Region (SEG)
MlksplllsillvliplsssDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDGHKSAA
Disordered region (IsUnstruct)
*****LLLSILLVLIPL*********LAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKY******************
Disordered Region (DISOPRED)
**KSPLLLSILLVLIPLSS******TLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDE***********
Disordered Region (DISEMBL)
MLKSPLLLSILLVLIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNF*************
Disordered Region (DISPRO)
MLKSPLLLSILLVLIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESP*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLKSPLLLSILLVLIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDGHKSAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
Q9M015	170	Uncharacterized protein A	no	no	0.648	0.564	0.204	0.0002

>sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 32  LTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGR 91
           L  Y  PIG+ P    ++  ++ + +  V +   C +    D+ +  ++  + G +E+G+
Sbjct: 58  LKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEKGK 116

Query: 92  IAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAK 129
           + +++GI+ +    W  +T I +    + F  GM  ++
Sbjct: 117 LTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGMKKSR 153

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
224117268	150	predicted protein [Populus trichocarpa]	0.878	0.866	0.761	6e-55
255549054	154	conserved hypothetical protein [Ricinus	0.851	0.818	0.761	3e-52
225445304	157	PREDICTED: uncharacterized protein LOC10	0.952	0.898	0.668	8e-52
388510266	156	unknown [Lotus japonicus]	0.885	0.839	0.702	6e-51
297812141	151	hypothetical protein ARALYDRAFT_488853 [	0.898	0.880	0.700	9e-51
15241137	151	uncharacterized protein [Arabidopsis tha	0.864	0.847	0.712	7e-50
351726048	156	uncharacterized protein LOC100527832 pre	0.966	0.916	0.62	4e-49
351726700	156	uncharacterized protein LOC100500202 pre	0.966	0.916	0.626	1e-48
388497324	156	unknown [Medicago truncatula]	0.972	0.923	0.623	1e-47
449461971	153	PREDICTED: uncharacterized protein LOC10	0.844	0.816	0.624	4e-44

>gi|224117268|ref|XP_002331738.1| predicted protein [Populus trichocarpa] gi|118487434|gb|ABK95545.1| unknown [Populus trichocarpa] gi|222874264|gb|EEF11395.1| predicted protein [Populus trichocarpa]

 Score =  218 bits (556), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 113/130 (86%)

Query: 19  SSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLAT 78
           S    PPT AH ELTNYGFPIGLLP SV+++T NQTSGEF V LG AC++TLPPDNYLAT
Sbjct: 21  SEKQKPPTAAHTELTNYGFPIGLLPSSVKNYTFNQTSGEFSVDLGSACKITLPPDNYLAT 80

Query: 79  YSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDES 138
           YS ++ GKI +GRIAELDGIRVRAFFKWW+ITGI SSGDNLVFEVGM+TAKYPSKNFDES
Sbjct: 81  YSKRVSGKIVEGRIAELDGIRVRAFFKWWSITGISSSGDNLVFEVGMITAKYPSKNFDES 140

Query: 139 PECDGHKSAA 148
           P+C+G  S++
Sbjct: 141 PQCEGKHSSS 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549054|ref|XP_002515583.1| conserved hypothetical protein [Ricinus communis] gi|223545527|gb|EEF47032.1| conserved hypothetical protein [Ricinus communis]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 111/126 (88%)

Query: 23  NPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNK 82
           NPP+ AH ELTNYGFPIGLLP SV ++ LNQTSG+F V+ GG+C++TLPPDNYLATYS K
Sbjct: 29  NPPSAAHTELTNYGFPIGLLPASVVNYNLNQTSGDFSVNFGGSCKITLPPDNYLATYSKK 88

Query: 83  IRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECD 142
           + GKI  GRIAELDGIRV AFFKWW+ITGIRSSG++LVFEVGMVTAKYPSKNF ESP+C+
Sbjct: 89  VTGKIVAGRIAELDGIRVWAFFKWWSITGIRSSGEDLVFEVGMVTAKYPSKNFLESPQCE 148

Query: 143 GHKSAA 148
           G  SA+
Sbjct: 149 GKHSAS 154

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445304|ref|XP_002284690.1| PREDICTED: uncharacterized protein LOC100261125 isoform 1 [Vitis vinifera] gi|359484606|ref|XP_003633129.1| PREDICTED: uncharacterized protein LOC100261125 isoform 2 [Vitis vinifera] gi|359484608|ref|XP_003633130.1| PREDICTED: uncharacterized protein LOC100261125 isoform 3 [Vitis vinifera]

 Score =  207 bits (528), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 101/151 (66%), Positives = 119/151 (78%), Gaps = 10/151 (6%)

Query: 5   PLLLSILLVLIPLSSSDPNPPT--------LAHAELTNYGFPIGLLPVSVQSHTLNQTSG 56
           PLL  I  +L P SSSDPNP +         AHAEL+NYGFP+GLLP +V  +++NQTSG
Sbjct: 8   PLL--IFFILFPHSSSDPNPTSKTLDSNVSAAHAELSNYGFPVGLLPTNVVDYSINQTSG 65

Query: 57  EFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSG 116
           EF V+LG +C+ TLPPDNYLATYS KI GKI  G IA L GIRVRAFF+WW+ITGIRSSG
Sbjct: 66  EFSVNLGYSCKFTLPPDNYLATYSPKISGKIVHGHIASLAGIRVRAFFQWWSITGIRSSG 125

Query: 117 DNLVFEVGMVTAKYPSKNFDESPECDGHKSA 147
           DNLVFEVG+VTAKYP+KNF E+P C+GH+S 
Sbjct: 126 DNLVFEVGVVTAKYPAKNFHETPVCEGHRSV 156

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510266|gb|AFK43199.1| unknown [Lotus japonicus]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/138 (70%), Positives = 115/138 (83%), Gaps = 7/138 (5%)

Query: 18  SSSDPNP------PTLAHAELTNYGFPIGLLP-VSVQSHTLNQTSGEFFVHLGGACRLTL 70
           S  +PNP      P+ AH ELTNYGFP+GLLP  +V    +NQTSG+F V LGGACR+TL
Sbjct: 19  SFQNPNPKPPKSTPSSAHIELTNYGFPVGLLPDTTVLGFAVNQTSGDFSVRLGGACRITL 78

Query: 71  PPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKY 130
           PPDNY+ATYSN I GKI +GRIAEL+GIRVRAFF+WW+ITGIRSSGDN+VFEVGMVTAKY
Sbjct: 79  PPDNYVATYSNTITGKIVKGRIAELNGIRVRAFFQWWSITGIRSSGDNIVFEVGMVTAKY 138

Query: 131 PSKNFDESPECDGHKSAA 148
           PSKNFD+SP C+G +S++
Sbjct: 139 PSKNFDDSPACEGQRSSS 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812141|ref|XP_002873954.1| hypothetical protein ARALYDRAFT_488853 [Arabidopsis lyrata subsp. lyrata] gi|297319791|gb|EFH50213.1| hypothetical protein ARALYDRAFT_488853 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (519), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 96/137 (70%), Positives = 116/137 (84%), Gaps = 4/137 (2%)

Query: 16  PLSSSDPNP----PTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLP 71
           P+S  DP+P    PT AHAELTN+GFPIGLLP+SV  + LNQTSG+F + L GAC++TLP
Sbjct: 15  PVSLQDPSPEVKKPTRAHAELTNHGFPIGLLPLSVNDYFLNQTSGDFSLFLNGACKITLP 74

Query: 72  PDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYP 131
           PDNY+ATYSNK+ G+I QG+IAEL GIRVRAFFK W+ITGIRSSGDNLVFEV  +TAKYP
Sbjct: 75  PDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYP 134

Query: 132 SKNFDESPECDGHKSAA 148
           SKNFDES +C+G +S++
Sbjct: 135 SKNFDESLDCEGKRSSS 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241137|ref|NP_197460.1| uncharacterized protein [Arabidopsis thaliana] gi|27311703|gb|AAO00817.1| putative protein [Arabidopsis thaliana] gi|30102880|gb|AAP21358.1| At5g19590 [Arabidopsis thaliana] gi|332005345|gb|AED92728.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  201 bits (512), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 94/132 (71%), Positives = 113/132 (85%), Gaps = 4/132 (3%)

Query: 21  DPNP----PTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYL 76
           DP P    PT AHAELTN+GFPIGLLP+SV+ + LNQTSG+F + L GAC++TLPPDNY+
Sbjct: 20  DPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYI 79

Query: 77  ATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFD 136
           ATYSNK+ G+I QG+IAEL GIRVRAFFK W+ITGIRSSGDNLVFEV  +TAKYPSKNFD
Sbjct: 80  ATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFD 139

Query: 137 ESPECDGHKSAA 148
           ES +C+G +S++
Sbjct: 140 ESLDCEGKRSSS 151

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726048|ref|NP_001238137.1| uncharacterized protein LOC100527832 precursor [Glycine max] gi|255633330|gb|ACU17022.1| unknown [Glycine max]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 118/150 (78%), Gaps = 7/150 (4%)

Query: 6   LLLSILLVLIPLSSSDPNP------PTLAHAELTNYGFPIGLLP-VSVQSHTLNQTSGEF 58
            + ++LL L+  S  +PNP      P+ AH EL NYG P+GLLP  +V  + +N+TSGEF
Sbjct: 7   FVFALLLNLVSNSFQNPNPKTPKSTPSQAHVELVNYGLPVGLLPATTVSGYAVNRTSGEF 66

Query: 59  FVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDN 118
            V L GAC++TLPPDNY+ATYS+ I GK  +G+IAEL+GIRVRAFFKWW+ITGIRSSGD+
Sbjct: 67  TVKLSGACKITLPPDNYVATYSDTITGKTVKGKIAELEGIRVRAFFKWWSITGIRSSGDD 126

Query: 119 LVFEVGMVTAKYPSKNFDESPECDGHKSAA 148
           +VFEVGMVTAKYPSKNFD+SP C+G  S++
Sbjct: 127 IVFEVGMVTAKYPSKNFDDSPACEGQHSSS 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726700|ref|NP_001238415.1| uncharacterized protein LOC100500202 precursor [Glycine max] gi|255629688|gb|ACU15193.1| unknown [Glycine max]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 119/150 (79%), Gaps = 7/150 (4%)

Query: 6   LLLSILLVLIPLSSSDPNPPT------LAHAELTNYGFPIGLLP-VSVQSHTLNQTSGEF 58
            + ++LL L+  S  +PNP T       AH EL N+G P GLLP  +V  + +N+TSG+F
Sbjct: 7   FVFALLLNLVSNSFQNPNPKTPKSTSSQAHVELINHGLPAGLLPATTVLGYAVNRTSGDF 66

Query: 59  FVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDN 118
            V LGGAC++TLPPDNY+ATYS+ I GKI +G+IAEL+GIRVRAFFKWW+ITGIRSSGD+
Sbjct: 67  TVKLGGACKITLPPDNYVATYSDTITGKIVKGKIAELEGIRVRAFFKWWSITGIRSSGDD 126

Query: 119 LVFEVGMVTAKYPSKNFDESPECDGHKSAA 148
           +VFEVGMVTAKYPSKNFD+SP C+GH S++
Sbjct: 127 IVFEVGMVTAKYPSKNFDDSPACEGHHSSS 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497324|gb|AFK36728.1| unknown [Medicago truncatula]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/154 (62%), Positives = 120/154 (77%), Gaps = 10/154 (6%)

Query: 4   SPLLLSILLVLIPLSS---SDPNP------PTLAHAELTNYGFPIGLLP-VSVQSHTLNQ 53
           +P +L + ++L+ L+S    +PNP      P+ AH EL  YGFPIGLLP  +V +H +N+
Sbjct: 2   NPKILIVFILLLNLTSKSIQNPNPKTPKPIPSPAHIELATYGFPIGLLPATTVLNHFINK 61

Query: 54  TSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIR 113
           TSGEF V L GAC++TLPPDNY+ATYS+ I GKI +G+IAELDGIRVRAFFKWW ITGIR
Sbjct: 62  TSGEFSVKLAGACKITLPPDNYVATYSDTITGKIVKGKIAELDGIRVRAFFKWWGITGIR 121

Query: 114 SSGDNLVFEVGMVTAKYPSKNFDESPECDGHKSA 147
           SSGD++VFEVG+VTAKYP KNF +SP C+G  SA
Sbjct: 122 SSGDDVVFEVGVVTAKYPVKNFVDSPPCEGKHSA 155

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461971|ref|XP_004148715.1| PREDICTED: uncharacterized protein LOC101218800 [Cucumis sativus] gi|449508255|ref|XP_004163264.1| PREDICTED: uncharacterized protein LOC101229689 [Cucumis sativus]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 105/125 (84%)

Query: 24  PPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKI 83
           PP+ AHA L +YGFP GLLP +V S+T+N TSG+F + LG +C+ TLPPDNY+A++S  +
Sbjct: 29  PPSSAHARLADYGFPFGLLPSAVSSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVV 88

Query: 84  RGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDG 143
            GKI +GRI  LDGIRVRA F+WW+ITGIRS+G++LVFEVG++TAKYPSK+F+ESP C+G
Sbjct: 89  TGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGEDLVFEVGLITAKYPSKSFNESPVCEG 148

Query: 144 HKSAA 148
            +S++
Sbjct: 149 RRSSS 153

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2183134	151	AT5G19590 "AT5G19590" [Arabido	0.864	0.847	0.712	3.7e-48
TAIR|locus:505006096	166	AT1G02816 "AT1G02816" [Arabido	0.804	0.716	0.347	2.5e-17
TAIR|locus:2133264	167	AT4G02370 "AT4G02370" [Arabido	0.804	0.712	0.322	1.1e-16
TAIR|locus:2133254	154	AT4G02360 "AT4G02360" [Arabido	0.770	0.740	0.350	7.7e-16
TAIR|locus:505006095	149	AT1G02813 [Arabidopsis thalian	0.729	0.724	0.354	1.1e-14
TAIR|locus:505006187	175	AT1G55265 [Arabidopsis thalian	0.770	0.651	0.357	4.9e-14
TAIR|locus:2147610	181	AT5G19860 "AT5G19860" [Arabido	0.790	0.646	0.346	1e-13
TAIR|locus:2079601	169	AT3G07470 [Arabidopsis thalian	0.75	0.656	0.316	6.6e-10
TAIR|locus:2079701	271	AT3G07460 "AT3G07460" [Arabido	0.709	0.387	0.315	2.6e-09
TAIR|locus:2172094	161	AT5G54530 "AT5G54530" [Arabido	0.790	0.726	0.267	5.3e-08

TAIR|locus:2183134 AT5G19590 "AT5G19590" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 94/132 (71%), Positives = 113/132 (85%)

Query:    21 DPNP----PTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYL 76
             DP P    PT AHAELTN+GFPIGLLP+SV+ + LNQTSG+F + L GAC++TLPPDNY+
Sbjct:    20 DPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYI 79

Query:    77 ATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFD 136
             ATYSNK+ G+I QG+IAEL GIRVRAFFK W+ITGIRSSGDNLVFEV  +TAKYPSKNFD
Sbjct:    80 ATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFD 139

Query:   137 ESPECDGHKSAA 148
             ES +C+G +S++
Sbjct:   140 ESLDCEGKRSSS 151

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:505006096 AT1G02816 "AT1G02816" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 42/121 (34%), Positives = 69/121 (57%)

Query:    21 DPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYS 80
             D + PT A+  L +Y FP+G+LP  V S+ L++++G+F  +   +C   L   +Y   Y 
Sbjct:    26 DDDIPT-AYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQ-GSYQLDYK 83

Query:    81 NKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPE 140
             + I G I + +I +L G++V+  F W  I  +  +GD L F VG+ +A +    F ESP+
Sbjct:    84 STISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQ 143

Query:   141 C 141
             C
Sbjct:   144 C 144

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2133264 AT4G02370 "AT4G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 39/121 (32%), Positives = 70/121 (57%)

Query:    21 DPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYS 80
             + + PT A++ L +Y FP+G+LP  V ++ L+ T+G+F  +   +C   L   +Y   Y 
Sbjct:    26 ESDTPT-AYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLV-GSYQLNYK 83

Query:    81 NKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPE 140
             + I G I + ++ +L G++V+  F W  I  +  +GD + F VG+ +A +  + F ESP+
Sbjct:    84 STISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSANFAIQEFLESPQ 143

Query:   141 C 141
             C
Sbjct:   144 C 144

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2133254 AT4G02360 "AT4G02360" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 41/117 (35%), Positives = 61/117 (52%)

Query:    25 PTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIR 84
             PT A+  +  Y  P G+LP  V  + LN  +G F V+    C  T+   +Y   Y + I 
Sbjct:    27 PT-AYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTI--QSYQLKYKSTIS 83

Query:    85 GKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPEC 141
             G I  G +  L G+ V+  F W  I  +   G +L F VG+ +A +P+ NF+ESP+C
Sbjct:    84 GVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQC 140

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006095 AT1G02813 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 39/110 (35%), Positives = 60/110 (54%)

Query:    32 LTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGR 91
             L NY  P G+LP  V  + LN+ +G F V     C+ ++  D+Y   Y   I G I +GR
Sbjct:    29 LENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSI--DSYKVKYKPVISGIITRGR 86

Query:    92 IAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPEC 141
             +  L G+ V+  F W  I+ +   GD++ F VG  + ++ SK F +SP+C
Sbjct:    87 VIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEEFSSKYFVDSPKC 136

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:505006187 AT1G55265 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 44/123 (35%), Positives = 65/123 (52%)

Query:    25 PTLA----HAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYS 80
             P+LA    H  L  YGFP GLLP +V+S+T++   G+F V L  +C +     + L  Y 
Sbjct:    47 PSLAADDIHDLLPRYGFPKGLLPNNVKSYTISD-DGDFTVDLISSCYVKF--SDQLVFYG 103

Query:    81 NKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRS--SGDNLVFEVGMVTAKYPSKNFDES 138
               I GK+  G + ++ GI+ +  F W  IT + S  S   +VF VG V+   P+  F+  
Sbjct:   104 KNIAGKLSYGSVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENV 163

Query:   139 PEC 141
             P C
Sbjct:   164 PSC 166

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2147610 AT5G19860 "AT5G19860" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 43/124 (34%), Positives = 60/124 (48%)

Query:    21 DPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYS 80
             DP+  +  +  L  YG P GLLP +V   TL+   G F VHL  +C +     +YL  Y 
Sbjct:    29 DPDSISTVYELLPKYGLPSGLLPDTVTDFTLSD-DGRFVVHLPNSCEIEF---DYLVHYD 84

Query:    81 NKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSS---GDNLVFEVGMVTAKYPSKNFDE 137
               I G+I  G I EL GI+V+ FF W  +  I+      D++ F+VG +  K     F  
Sbjct:    85 KTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKT 144

Query:   138 SPEC 141
                C
Sbjct:   145 IHSC 148

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2079601 AT3G07470 [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 38/120 (31%), Positives = 58/120 (48%)

Query:    26 TLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRG 85
             T+    L N G P G+ P  V+  T +  +G F V+L  AC      + +   Y   I G
Sbjct:    30 TIYEILLAN-GLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIH---YDANITG 85

Query:    86 KIEQGRIAELDGIRVRAFFKWWAITGIR----SSGDNLVFEVGMVTAKYPSKNFDESPEC 141
              I   +I++L GI  +  F W+ + GIR    SSG  + F+VG+V  +Y    F+   +C
Sbjct:    86 TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSG-LIYFDVGVVRKQYSLSLFETPRDC 144

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2079701 AT3G07460 "AT3G07460" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 36/114 (31%), Positives = 57/114 (50%)

Query:    32 LTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGR 91
             L N G P+GL P  V+  T+N  +G F V+L  +C+     + +   Y   + G I   +
Sbjct:    35 LAN-GLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELH---YDEIVSGTIGYAQ 90

Query:    92 IAELDGIRVRAFFKWWAITGIR----SSGDNLVFEVGMVTAKYPSKNFDESPEC 141
             I +L GI  +  F W  + GIR    SSG  + F+VG++  +Y    F+   +C
Sbjct:    91 IRDLSGISAQELFLWLQVKGIRVDVPSSG-LIFFDVGVLRKQYSLSLFETPRDC 143

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2172094 AT5G54530 "AT5G54530" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 34/127 (26%), Positives = 58/127 (45%)

Query:    22 PNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSN 81
             P+ PT+ H  L + G P GLLP  V S+ L+   G   V L   C      + +   +  
Sbjct:    24 PSYPTV-HDVLRSEGLPAGLLPQEVDSYILHN-DGRLEVFLAAPCYAKFETNVH---FEA 78

Query:    82 KIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDN---LVFEVGMVTAKYPSKNFDES 138
              +RG +  G +  ++G+  +  F W  +  I     N   +VF++G+   +     F++ 
Sbjct:    79 VVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDP 138

Query:   139 PEC--DG 143
             P+C  DG
Sbjct:   139 PKCKPDG 145

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0177000301 SubName- Full=Putative uncharacterized protein; (150 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	148
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	5e-36

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score =  119 bits (301), Expect = 5e-36
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)

Query: 28  AHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKI 87
           A+  L  YG P+GLLP  V  +TL++T+G+F+V+L G C  T   + Y   Y   + G I
Sbjct: 2   AYELLEEYGLPVGLLPKGVTEYTLDETTGKFWVYLNGTCEFTF--EGYSVRYDPTVTGYI 59

Query: 88  EQGRIAELDGIRVRAFFKWWAITGI-RSSGDNLVFEVGMVTAKYPSKNF 135
            +GR++ L+G++V+  F W  I  I    GD L F VG+++  +P+  F
Sbjct: 60  SKGRLSGLEGVKVKVLFLWVPIVEISVDDGDKLTFSVGVLSKSFPADAF 108

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=6.5e-49  Score=290.99  Aligned_cols=110  Identities=38%  Similarity=0.784  Sum_probs=84.2

Q ss_pred             cHHHHHhhCCCCCCCCCCCceeEEEecCCcEEEEEeCCeeEEEeCCCceEEEecceEEEEEcccccccccceEEEEEEee
Q 032056           27 LAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAFFKW  106 (148)
Q Consensus        27 tayelL~~~glP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~f~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~K~lf~W  106 (148)
                      ||||+|++||||+||||++|++|+||++||+|||+|+++|+|+|+  +|+|+|+++|||+|++|+|++|+|||+|++|+|
T Consensus         1 tayelL~~~glP~GLLP~~v~~y~l~~~tG~f~v~l~~~C~~~~~--~~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~W   78 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLPLGVTEYGLNRDTGFFWVKLKSPCEFRFE--GYLVSYDSEITGYIEKGKIKNLTGVKVKELFLW   78 (110)
T ss_dssp             --HHHHHHHS-TT-TTTSSS-EEEE-TTT-SEEEE-SS-EEEEST--TSEEEE-SEEEEEE-SS-EEEEES-EEE-SSSE
T ss_pred             CHHHhHHHcCCCCCcCCCCceEEEEecCCcEEEEEecCCEEEEEE--EEEEEEcCeEEEEECCCcCccccCEEEEEEEEE
Confidence            799999999999999999999999999999999999999999996  389999999999999999999999999999999


Q ss_pred             eeeEEEEEeCCeEEEEEceeeeeeecCCccCC
Q 032056          107 WAITGIRSSGDNLVFEVGMVTAKYPSKNFDES  138 (148)
Q Consensus       107 v~V~eI~v~~~~i~F~vg~~s~sFP~s~F~~~  138 (148)
                      ++|+||.+++++|+|++|+++++||+++|++|
T Consensus        79 ~~v~~i~~~~~~i~F~~g~~s~sfp~~~F~~s  110 (110)
T PF04398_consen   79 VPVTEISVDGDKIYFKVGGISKSFPVSAFEES  110 (110)
T ss_dssp             ES---BEE-SSSEE-TTSSSS----TTTTSS-
T ss_pred             eeEEEEEEcCCEEEEEEeeEeccCCHHHhccC
Confidence            99999999999999999999999999999985

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	148
1ydu_A	170	Solution Nmr Structure Of At5g01610, An Arabidopsis		1e-05

>pdb|1YDU|A Chain A, Solution Nmr Structure Of At5g01610, An Arabidopsis Thaliana Protein Containing Duf538 Domain Length = 170

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 32  LTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGR 91
           L  Y  PIG+ P    ++  ++ + +  V +   C +    D+ +  ++  + G +E+G+
Sbjct: 58  LKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEKGK 116
Query: 92  IAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGM 125
           + +++GI+ +    W  +T I +    + F  GM
Sbjct: 117 LTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGM 149

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	1e-35

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score =  120 bits (302), Expect = 1e-35
 Identities = 22/128 (17%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 14  LIPLSSSDPNPPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPD 73
           L+         P      L  Y  PIG+ P    ++  ++ + +  V +   C +    D
Sbjct: 42  LVNKIKGKMQKP--LPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGY-KD 98

Query: 74  NYLATYSNKIRGKIEQGRIAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSK 133
           + +  ++  + G +E+G++ +++GI+ +    W  +T I +    + F  GM  +     
Sbjct: 99  SSVLKFTTTVTGHLEKGKLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGMKKS-RSRD 156

Query: 134 NFDESPEC 141
            +      
Sbjct: 157 AYGVQRNG 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=7.2e-47  Score=297.13  Aligned_cols=119  Identities=16%  Similarity=0.427  Sum_probs=114.1

Q ss_pred             CCccHHHHHhhCCCCCCCCCCCceeEEEecCCcEEEEEeCCeeEEEeCCCceEEEecceEEEEEcccccccccceEEEEE
Q 032056           24 PPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAF  103 (148)
Q Consensus        24 ~~~tayelL~~~glP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~f~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~K~l  103 (148)
                      +.+++||+|++||||+||||++|++|+||++||+|||+|+++|+|+|+ ++|+|+|+++|||+|++|+|++|+|||+|+|
T Consensus        50 ~~~ta~elL~e~gLP~GLLP~~V~~Y~l~~~tG~f~V~l~~~C~~~f~-~~~~v~Y~~~VtG~l~~GkI~~L~GVk~K~L  128 (170)
T 1ydu_A           50 MQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEKGKLTDVEGIKTKVM  128 (170)
T ss_dssp             TTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEEST-TSSEEEECSEEEEEECSSCEEEEESCEEESS
T ss_pred             ccccHHHHHHHcCCCCCcCCCCCeEEEEECCCcEEEEEeCCCEEEEec-CccEEEEcCEEEEEEcCCcCccccCEEEEEE
Confidence            346999999999999999999999999999999999999999999997 5899999999999999999999999999999


Q ss_pred             EeeeeeEEEEEeCCeEEEEEceeeeeeecCCccCCCCCCCCC
Q 032056          104 FKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDGHK  145 (148)
Q Consensus       104 f~Wv~V~eI~v~~~~i~F~vg~~s~sFP~s~F~~~p~C~~~~  145 (148)
                       +|++|+||.|++++|+|++| ++++||+++|+.+|.|...+
T Consensus       129 -lWv~V~eI~v~~~kI~F~vG-i~ksfp~saFe~~~~c~~~~  168 (170)
T 1ydu_A          129 -IWVKVTSISTDASKVYFTAG-MKKSRSRDAYGVQRNGLRVD  168 (170)
T ss_dssp             -SEESCCCBEECSSSEECTTS-SSSCCCHHHHSSCCCCCCTT
T ss_pred             -EEeeEEEEEEeCCEEEEEEc-CcccccHHHhcCCcCCcccC
Confidence             99999999999999999998 68999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	4e-33

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  112 bits (283), Expect = 4e-33
 Identities = 19/110 (17%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 32  LTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGR 91
           L  Y  PIG+ P    ++  ++ + +  V +   C +    D+ +  ++  + G +E+G+
Sbjct: 57  LKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGY-KDSSVLKFTTTVTGHLEKGK 115

Query: 92  IAELDGIRVRAFFKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPEC 141
           + +++GI+ +    W  +T I +    + F  G +        +      
Sbjct: 116 LTDVEGIKTKVMI-WVKVTSISTDASKVYFTAG-MKKSRSRDAYGVQRNG 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.5e-46  Score=289.72  Aligned_cols=118  Identities=16%  Similarity=0.430  Sum_probs=110.8

Q ss_pred             CCccHHHHHhhCCCCCCCCCCCceeEEEecCCcEEEEEeCCeeEEEeCCCceEEEecceEEEEEcccccccccceEEEEE
Q 032056           24 PPTLAHAELTNYGFPIGLLPVSVQSHTLNQTSGEFFVHLGGACRLTLPPDNYLATYSNKIRGKIEQGRIAELDGIRVRAF  103 (148)
Q Consensus        24 ~~~tayelL~~~glP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~~~f~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~K~l  103 (148)
                      |.++.+|||++||||+||||++|++|+||++||+|||+|+++|+|.|+ ++|+|+|+++|||+|++|+|++|+|||+| +
T Consensus        49 ~~k~l~ELL~eygLP~GLLP~~V~~Y~l~~~TG~f~V~l~~~C~~~f~-~sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-l  126 (169)
T d1ydua1          49 MQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEKGKLTDVEGIKTK-V  126 (169)
T ss_dssp             TTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEEST-TSSEEEECSEEEEEECSSCEEEEESCEEE-S
T ss_pred             CCCCHHHHHHhcCCCCccCCCCceEEEEECCCcEEEEEeCCCEEEEec-CceEEEEcCEEEEEEcCCcCccccceEEE-E
Confidence            456899999999999999999999999999999999999999999996 68999999999999999999999999999 7


Q ss_pred             EeeeeeEEEEEeCCeEEEEEceeeeeeecCCccCCCCCCCC
Q 032056          104 FKWWAITGIRSSGDNLVFEVGMVTAKYPSKNFDESPECDGH  144 (148)
Q Consensus       104 f~Wv~V~eI~v~~~~i~F~vg~~s~sFP~s~F~~~p~C~~~  144 (148)
                      |+|++|+||.+|+++|+|++| ++|+||+++|+.++.|...
T Consensus       127 flWv~V~eI~vd~~kI~F~vG-I~KsfP~daFE~prdg~~v  166 (169)
T d1ydua1         127 MIWVKVTSISTDASKVYFTAG-MKKSRSRDAYGVQRNGLRV  166 (169)
T ss_dssp             SSEESCCCBEECSSSEECTTS-SSSCCCHHHHSSCCCCCCT
T ss_pred             EEEEEEEEEEEcCCeEEEEec-ccccCCHHHccCCccceee
Confidence            899999999999999999999 7899999999877666543