Citrus Sinensis ID: 032076

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM
Secondary Structure (PSIPRED)
cccccHHcccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccccccEEEEEEEEccccccccccccccHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccEcEccHHHHHHHHHHHHHHHHHHcccEccccccccHHHHHHHcccEcccHHHHHHccccccccEccccccEcccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mtlqsslcgsgvstfictprpiiarprpvtqiraqvepseKSVEIMRKFSEQYARrsdtffcvdkSVTSVVIKGLAdhkdslgaplcpcrhyddKAAEAQqgfwncpcvpmrerkechcmlfltpendfagqdqsisLDEIKESTANM
Flexible Loop (DISEMBL)
mtlqsslcgsgvstfictprpiiarprpvtqiraqvepseksveIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTpendfagqdqsiSLDEikestanm
Low Complexity Region (SEG)
MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM
Disordered region (IsUnstruct)
*******CGSGVSTFICTPRPIIARPR*V*******************FSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPE**********************
Disordered Region (DISOPRED)
*******CGSGVST********************************RKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPEND********************
Disordered Region (DISEMBL)
********GSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM
Disordered Region (DISPRO)
*TLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
O49856	144	Ferredoxin-thioredoxin re	yes	no	0.972	1.0	0.75	4e-60
Q9SJ89	146	Ferredoxin-thioredoxin re	yes	no	0.972	0.986	0.746	2e-59
P41349	148	Ferredoxin-thioredoxin re	N/A	no	0.824	0.824	0.844	2e-58
P41348	144	Ferredoxin-thioredoxin re	N/A	no	0.844	0.868	0.777	5e-57
P41347	152	Ferredoxin-thioredoxin re	N/A	no	0.837	0.815	0.744	1e-53
Q6K471	146	Ferredoxin-thioredoxin re	yes	no	0.729	0.739	0.842	1e-52
Q1XDA1	116	Ferredoxin-thioredoxin re	N/A	no	0.695	0.887	0.660	3e-38
P51386	118	Ferredoxin-thioredoxin re	N/A	no	0.716	0.898	0.650	3e-38
O78461	102	Ferredoxin-thioredoxin re	yes	no	0.682	0.990	0.623	8e-37
Q9TM25	111	Ferredoxin-thioredoxin re	N/A	no	0.695	0.927	0.601	1e-36

>sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max GN=FTRC PE=2 SV=1

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 123/148 (83%), Gaps = 4/148 (2%)

Query: 1   MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTF 60
           MT Q+S     V + + TP     R R    +RAQ EPS+KSVEIMRKFSEQYAR+S T+
Sbjct: 1   MTTQASTFAVAVPS-VATP---FRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTY 56

Query: 61  FCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCM 120
           FCVDK VTSVVIKGLADHKD+LGAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECHCM
Sbjct: 57  FCVDKGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCM 116

Query: 121 LFLTPENDFAGQDQSISLDEIKESTANM 148
           LFLTP+NDFAG +Q+I+LDEIKESTANM
Sbjct: 117 LFLTPDNDFAGNEQTITLDEIKESTANM 144

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 8EC: .EC: 7EC: .EC: 2

>sp|Q9SJ89|FTRC_ARATH Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis thaliana GN=FTRC PE=2 SV=1

 Score =  227 bits (578), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 121/150 (80%), Gaps = 6/150 (4%)

Query: 1   MTLQSSLCGSGV--STFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
           M LQ+  C  G   S    TPR    R      IRA+ EPSEKSVEIMRKFSEQYARRS 
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRR----FVIRAKTEPSEKSVEIMRKFSEQYARRSG 56

Query: 59  TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
           T+FCVDK VTSVVIKGLA+HKDS GAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECH
Sbjct: 57  TYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECH 116

Query: 119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CMLFLTP+NDFAG+DQ+I+ DEIKE+TANM
Sbjct: 117 CMLFLTPDNDFAGKDQTITSDEIKETTANM 146

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|P41349|FTRC2_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 103/122 (84%), Positives = 113/122 (92%)

Query: 27  RPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPL 86
           RP   I ++VEPS+KSVEIMRKFSEQYAR+S T+FCVDK VTSVVIKGLA+HKDSLGAPL
Sbjct: 27  RPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLAEHKDSLGAPL 86

Query: 87  CPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTA 146
           CPCR+YDDKAAEA QGFWNCPCVPMRERKECHCMLFLTPENDFAG+DQ+I LDEI+E TA
Sbjct: 87  CPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTA 146

Query: 147 NM 148
           NM
Sbjct: 147 NM 148

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|P41348|FTRC1_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea GN=FTRC PE=1 SV=2

 Score =  219 bits (558), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 118/126 (93%), Gaps = 1/126 (0%)

Query: 24  ARPRPVTQ-IRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSL 82
           A PR  ++ IRAQ +PS+KS+E+MRKFSEQ+ R+SDT+FCVDKSVT+VVIKGLADH+D+L
Sbjct: 19  ASPRRFSRVIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTAVVIKGLADHRDTL 78

Query: 83  GAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIK 142
           GAPLCPCRHYDDK AEA+QGFWNCPCVPMRERKECHCMLFLTP+NDFAG++Q+I+LDEI+
Sbjct: 79  GAPLCPCRHYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKEQTITLDEIR 138

Query: 143 ESTANM 148
           E T+NM
Sbjct: 139 EVTSNM 144

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|P41347|FTRC_MAIZE Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays GN=FTRC PE=2 SV=1

 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 96/129 (74%), Positives = 110/129 (85%), Gaps = 5/129 (3%)

Query: 24  ARPRPVTQIRAQVE----PSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHK 79
            RPR    +RAQ       ++KSVE+MRKFSEQYARRS+TFFC DK+VT+VVIKGLADH+
Sbjct: 25  GRPRRCA-VRAQAAGADASNDKSVEVMRKFSEQYARRSNTFFCADKTVTAVVIKGLADHR 83

Query: 80  DSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLD 139
           D+LGAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECHCMLFLTP+NDFAG+DQ IS +
Sbjct: 84  DTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQVISFE 143

Query: 140 EIKESTANM 148
           EIKE+T+  
Sbjct: 144 EIKEATSKF 152

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|Q6K471|FTRC_ORYSJ Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0249900 PE=2 SV=1

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 91/108 (84%), Positives = 103/108 (95%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           KS+EIMRKFSEQYARRS+TFFC +KSVT+VVIKGLADHKD LGAPLCPCRHYDDKAAE  
Sbjct: 39  KSLEIMRKFSEQYARRSNTFFCSEKSVTAVVIKGLADHKDQLGAPLCPCRHYDDKAAEVA 98

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           QGFWNCPCVPMRERKECHCMLFLTP+NDFAGQDQ+I+L+EIK++T+ +
Sbjct: 99  QGFWNCPCVPMRERKECHCMLFLTPDNDFAGQDQAITLEEIKDATSKI 146

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|Q1XDA1|FTRC_PORYE Ferredoxin-thioredoxin reductase, catalytic chain OS=Porphyra yezoensis GN=ftrB PE=3 SV=2

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 82/103 (79%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           +++E MRKFSE YA+R+ TFFC+D SVT+VVI+GLA HKD  GAPLCPCRHY+DK AE  
Sbjct: 11  ENLEAMRKFSETYAKRTGTFFCIDSSVTAVVIEGLARHKDQYGAPLCPCRHYEDKKAEIS 70

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKE 143
             +WNCPCVPMRER+ECHCMLFLTP+N+FA   Q I    + E
Sbjct: 71  ATYWNCPCVPMRERRECHCMLFLTPDNEFASDLQEIDKTTLTE 113

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Porphyra yezoensis (taxid: 2788)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|P51386|FTRC_PORPU Ferredoxin-thioredoxin reductase, catalytic chain OS=Porphyra purpurea GN=ftrB PE=3 SV=1

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 81/106 (76%)

Query: 42  SVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQ 101
           ++E MRKFSE YA+R+ TFFC D SVT+VVI+GLA HKD  GAPLCPCRHY+DK AE   
Sbjct: 12  NLEAMRKFSETYAKRTGTFFCADNSVTAVVIEGLARHKDKYGAPLCPCRHYEDKKAEISA 71

Query: 102 GFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN 147
            +WNCPCVPMRERKECHCMLFLTP+N+F    Q I    + E  A+
Sbjct: 72  TYWNCPCVPMRERKECHCMLFLTPDNEFTSDLQEIDKTTLLEKIAS 117

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|O78461|FTRC_GUITH Ferredoxin-thioredoxin reductase, catalytic chain OS=Guillardia theta GN=ftrB PE=3 SV=1

 Score =  152 bits (383), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 79/101 (78%)

Query: 36  VEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDK 95
           +E    S   M+KF+E YA+R++TFFC D S+T +V++GLA HKD  GAPLCPCRHYDDK
Sbjct: 2   IESYSDSFVAMKKFAETYAKRTNTFFCNDLSITQIVLEGLAKHKDEYGAPLCPCRHYDDK 61

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSI 136
           + E    +WNCPCVPMRERKECHCMLFLT +N+FAG  Q++
Sbjct: 62  SEEVASTYWNCPCVPMRERKECHCMLFLTKDNEFAGSSQTL 102

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Guillardia theta (taxid: 55529)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

>sp|Q9TM25|FTRC_CYACA Ferredoxin-thioredoxin reductase, catalytic chain OS=Cyanidium caldarium GN=ftrB PE=3 SV=1

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 84/103 (81%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           K++E + KF+E YA+ S T+FC+D+S+T++VI+GLA HKD  GAPLCPCRHY++K  E  
Sbjct: 6   KNLESLHKFAEAYAKLSRTYFCIDQSITALVIEGLARHKDDYGAPLCPCRHYENKKTEVL 65

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKE 143
             +WNCPCVPMRERKECHCMLFL P N+F+G+ Q IS D++++
Sbjct: 66  AAYWNCPCVPMRERKECHCMLFLQPSNEFSGESQLISKDDLQK 108

FTR is a [4Fe-4S] protein playing a central role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin) in the regulation of enzymes by reduction of specific disulfide groups. Catalyzes the light-dependent activation of several photosynthetic enzymes.

Cyanidium caldarium (taxid: 2771)

EC: 1

EC: .

EC: 8

EC: .

EC: 7

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
225452570	145	PREDICTED: ferredoxin-thioredoxin reduct	0.972	0.993	0.798	5e-63
14275859	148	ferredoxin-thioredoxin-reductase catalyt	0.966	0.966	0.746	5e-60
388494172	144	unknown [Lotus japonicus]	0.851	0.875	0.849	5e-60
407971016	144	ferredoxin-thioredoxin reductase catalyt	0.972	1.0	0.75	3e-58
15224046	146	Ferredoxin-thioredoxin reductase catalyt	0.972	0.986	0.746	1e-57
297831548	146	ferredoxin thioredoxin reductase catalyt	0.972	0.986	0.746	1e-57
47155380	154	ferredoxin [Codonopsis lanceolata]	0.824	0.792	0.827	6e-57
729537	148	RecName: Full=Ferredoxin-thioredoxin red	0.824	0.824	0.844	1e-56
224059980	150	predicted protein [Populus trichocarpa]	0.790	0.78	0.881	1e-56
449492658	187	PREDICTED: ferredoxin-thioredoxin reduct	0.790	0.625	0.846	2e-56

>gi|225452570|ref|XP_002280653.1| PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Vitis vinifera] gi|296087725|emb|CBI34981.3| unnamed protein product [Vitis vinifera]

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 132/149 (88%), Gaps = 5/149 (3%)

Query: 1   MTLQ-SSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDT 59
           M+LQ SS    G+S+F+  PR    R R V +IRA+VEPS+KSVEIMRKFSEQYAR+S T
Sbjct: 1   MSLQASSSYAFGISSFVSPPR----RVRHVPEIRAKVEPSDKSVEIMRKFSEQYARKSGT 56

Query: 60  FFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHC 119
           +FCVDK VTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEA QGFWNCPCVPMRERKECHC
Sbjct: 57  YFCVDKGVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAGQGFWNCPCVPMRERKECHC 116

Query: 120 MLFLTPENDFAGQDQSISLDEIKESTANM 148
           MLFLTP+NDFAGQDQ+ISL+EI+ESTANM
Sbjct: 117 MLFLTPDNDFAGQDQTISLEEIRESTANM 145

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14275859|emb|CAC39620.1| ferredoxin-thioredoxin-reductase catalytic subunit B [Solanum tuberosum]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 130/150 (86%), Gaps = 7/150 (4%)

Query: 2   TLQSSL---CGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
           TLQ+S     G G+S+F   P+P   R   V    A++EPSEKSVEIMRKFSEQYARRS+
Sbjct: 3   TLQASTSYSVGFGISSFATRPKPSTHRCLTV----AKMEPSEKSVEIMRKFSEQYARRSE 58

Query: 59  TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
           T+FC+DK VTSVVIKGLA+HKD+LGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH
Sbjct: 59  TYFCMDKGVTSVVIKGLAEHKDTLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118

Query: 119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CMLFLTP+NDFAG++Q+IS++EIKE+TANM
Sbjct: 119 CMLFLTPDNDFAGEEQTISMEEIKETTANM 148

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494172|gb|AFK35152.1| unknown [Lotus japonicus]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 107/126 (84%), Positives = 119/126 (94%)

Query: 23  IARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSL 82
           + R R +  +RAQVEPSEKS+EIMRKFSEQYAR+S T+FCVDKSVTSVVIKGLADHKDSL
Sbjct: 19  LRRHRNLHVVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSL 78

Query: 83  GAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIK 142
           GAPLCPCRHYDDK AEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAG++Q+I+LDEI+
Sbjct: 79  GAPLCPCRHYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIR 138

Query: 143 ESTANM 148
           E+TANM
Sbjct: 139 ETTANM 144

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|407971016|ref|NP_001236326.1| ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Glycine max] gi|3913670|sp|O49856.1|FTRC_SOYBN RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic; Short=FTR-C; Flags: Precursor gi|2765445|emb|CAA75356.1| ferredoxin thioredoxin reductase precursor [Glycine max]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 123/148 (83%), Gaps = 4/148 (2%)

Query: 1   MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTF 60
           MT Q+S     V + + TP     R R    +RAQ EPS+KSVEIMRKFSEQYAR+S T+
Sbjct: 1   MTTQASTFAVAVPS-VATP---FRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTY 56

Query: 61  FCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCM 120
           FCVDK VTSVVIKGLADHKD+LGAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECHCM
Sbjct: 57  FCVDKGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCM 116

Query: 121 LFLTPENDFAGQDQSISLDEIKESTANM 148
           LFLTP+NDFAG +Q+I+LDEIKESTANM
Sbjct: 117 LFLTPDNDFAGNEQTITLDEIKESTANM 144

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224046|ref|NP_178547.1| Ferredoxin-thioredoxin reductase catalytic chain [Arabidopsis thaliana] gi|75206241|sp|Q9SJ89.1|FTRC_ARATH RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic; Short=FTR-C; Flags: Precursor gi|4544427|gb|AAD22336.1| putative ferredoxin-thioredoxin reductase [Arabidopsis thaliana] gi|17380642|gb|AAL36151.1| putative ferredoxin-thioredoxin reductase [Arabidopsis thaliana] gi|21436083|gb|AAM51242.1| putative ferredoxin-thioredoxin reductase [Arabidopsis thaliana] gi|21593637|gb|AAM65604.1| putative ferredoxin-thioredoxin reductase [Arabidopsis thaliana] gi|330250764|gb|AEC05858.1| Ferredoxin-thioredoxin reductase catalytic chain [Arabidopsis thaliana]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 121/150 (80%), Gaps = 6/150 (4%)

Query: 1   MTLQSSLCGSGV--STFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
           M LQ+  C  G   S    TPR    R      IRA+ EPSEKSVEIMRKFSEQYARRS 
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRR----FVIRAKTEPSEKSVEIMRKFSEQYARRSG 56

Query: 59  TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
           T+FCVDK VTSVVIKGLA+HKDS GAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECH
Sbjct: 57  TYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECH 116

Query: 119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CMLFLTP+NDFAG+DQ+I+ DEIKE+TANM
Sbjct: 117 CMLFLTPDNDFAGKDQTITSDEIKETTANM 146

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831548|ref|XP_002883656.1| ferredoxin thioredoxin reductase catalytic beta chain family protein [Arabidopsis lyrata subsp. lyrata] gi|297329496|gb|EFH59915.1| ferredoxin thioredoxin reductase catalytic beta chain family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 121/150 (80%), Gaps = 6/150 (4%)

Query: 1   MTLQSSLCGSGV--STFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
           M LQ+  C  G   S    TPR    R      IRA+ EPSEKSVEIMRKFSEQYARRS 
Sbjct: 1   MNLQAVSCSFGFVSSPLGVTPRTSFRR----FVIRAKTEPSEKSVEIMRKFSEQYARRSG 56

Query: 59  TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
           T+FCVDK VTSVVIKGLA+HKDS GAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECH
Sbjct: 57  TYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECH 116

Query: 119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CMLFLTP+NDFAG+DQ+I+ DEIKE+TANM
Sbjct: 117 CMLFLTPDNDFAGKDQTITSDEIKETTANM 146

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47155380|dbj|BAD18925.1| ferredoxin [Codonopsis lanceolata]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 101/122 (82%), Positives = 114/122 (93%)

Query: 27  RPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPL 86
           R +  ++A+ EP++KSVEIMRKFSEQYAR+S T+FCVDK VTSVVIKGLADHKD+LGAPL
Sbjct: 33  RRLMIVQAKAEPTQKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLADHKDALGAPL 92

Query: 87  CPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTA 146
           CPCRHYDDKAAEA QGFWNCPCVPMRERKECHCMLFLTP+NDFAGQ+QSI+L+EIKEST 
Sbjct: 93  CPCRHYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPDNDFAGQEQSITLEEIKESTT 152

Query: 147 NM 148
           NM
Sbjct: 153 NM 154

Source: Codonopsis lanceolata

Species: Codonopsis lanceolata

Genus: Codonopsis

Family: Campanulaceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|729537|sp|P41349.1|FTRC2_SPIOL RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic; Short=FTR-C; AltName: Full=B1; AltName: Full=Ferredoxin-thioredoxin reductase subunit B; Short=FTR-B; Flags: Precursor gi|505189|emb|CAA54409.1| ferredoxin-thioredoxin reductase SU B [Spinacia oleracea]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 103/122 (84%), Positives = 113/122 (92%)

Query: 27  RPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPL 86
           RP   I ++VEPS+KSVEIMRKFSEQYAR+S T+FCVDK VTSVVIKGLA+HKDSLGAPL
Sbjct: 27  RPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLAEHKDSLGAPL 86

Query: 87  CPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTA 146
           CPCR+YDDKAAEA QGFWNCPCVPMRERKECHCMLFLTPENDFAG+DQ+I LDEI+E TA
Sbjct: 87  CPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTA 146

Query: 147 NM 148
           NM
Sbjct: 147 NM 148

Source: Spinacia oleracea

Species: Spinacia oleracea

Genus: Spinacia

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059980|ref|XP_002300023.1| predicted protein [Populus trichocarpa] gi|118489451|gb|ABK96528.1| unknown [Populus trichocarpa x Populus deltoides] gi|222847281|gb|EEE84828.1| predicted protein [Populus trichocarpa]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 104/118 (88%), Positives = 114/118 (96%), Gaps = 1/118 (0%)

Query: 32  IRA-QVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCR 90
           IRA +VEPS+KSVEIMRKFSEQYAR+S T+FCVDK VTSVVIKGLADHKDSLGAPLCPCR
Sbjct: 33  IRASKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLADHKDSLGAPLCPCR 92

Query: 91  HYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           HYDDKAAEA QGFWNCPCVPMRERKECHCMLFLTP+NDFAG+DQ+ISL+EI+E+TANM
Sbjct: 93  HYDDKAAEAGQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQTISLEEIRETTANM 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449492658|ref|XP_004159064.1| PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucumis sativus]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 109/117 (93%)

Query: 32  IRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRH 91
           +RAQ EPSEKSVEIMRKFSEQYAR+S T+FCVDK VT+VVIKGLADHKD+LGAPLCPCRH
Sbjct: 71  VRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRH 130

Query: 92  YDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           YDDK AE  QGFWNCPCVPMRERKECHCMLFLTPENDFAG DQ+ISL++I+ +TANM
Sbjct: 131 YDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM 187

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2049228	146	AT2G04700 [Arabidopsis thalian	0.972	0.986	0.746	1.1e-55
UNIPROTKB|Q55389	118	ftrC "Ferredoxin-thioredoxin r	0.743	0.932	0.645	1.8e-39

TAIR|locus:2049228 AT2G04700 [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 112/150 (74%), Positives = 121/150 (80%)

Query:     1 MTLQSSLCGSGV--STFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
             M LQ+  C  G   S    TPR    R      IRA+ EPSEKSVEIMRKFSEQYARRS 
Sbjct:     1 MNLQAVSCSFGFLSSPLGVTPRTSFRR----FVIRAKTEPSEKSVEIMRKFSEQYARRSG 56

Query:    59 TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
             T+FCVDK VTSVVIKGLA+HKDS GAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECH
Sbjct:    57 TYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECH 116

Query:   119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
             CMLFLTP+NDFAG+DQ+I+ DEIKE+TANM
Sbjct:   117 CMLFLTPDNDFAGKDQTITSDEIKETTANM 146

GO:0008937 "ferredoxin-NAD(P) reductase activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0030385 "ferredoxin:thioredoxin reductase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

UNIPROTKB|Q55389 ftrC "Ferredoxin-thioredoxin reductase, catalytic chain" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 71/110 (64%), Positives = 91/110 (82%)

Query:    39 SEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAE 98
             + K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE
Sbjct:     8 NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAE 67

Query:    99 AQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
              +  FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+M
Sbjct:    68 VKNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKASM 117


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       148   0.00068  104 3  11 22  0.43    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  146 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.18u 0.20s 14.38t   Elapsed:  00:00:01
  Total cpu time:  14.18u 0.20s 14.38t   Elapsed:  00:00:01
  Start:  Fri May 10 14:17:20 2013   End:  Fri May 10 14:17:21 2013

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SJ89	FTRC_ARATH	1, ., 8, ., 7, ., 2	0.7466	0.9729	0.9863	yes	no
Q6K471	FTRC_ORYSJ	1, ., 8, ., 7, ., 2	0.8425	0.7297	0.7397	yes	no
O78461	FTRC_GUITH	1, ., 8, ., 7, ., 2	0.6237	0.6824	0.9901	yes	no
O49856	FTRC_SOYBN	1, ., 8, ., 7, ., 2	0.75	0.9729	1.0	yes	no
P41348	FTRC1_SPIOL	1, ., 8, ., 7, ., 2	0.7777	0.8445	0.8680	N/A	no
P41349	FTRC2_SPIOL	1, ., 8, ., 7, ., 2	0.8442	0.8243	0.8243	N/A	no
P41347	FTRC_MAIZE	1, ., 8, ., 7, ., 2	0.7441	0.8378	0.8157	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.8.7.2	0.979
3rd Layer	1.8.7	0.983

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00020811001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (145 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00005318001	SubName- Full=Chromosome undetermined scaffold_1017, whole genome shotgun sequence; (554 aa)	•						•		0.814
	GSVIVG00002047001	SubName- Full=Chromosome undetermined scaffold_125, whole genome shotgun sequence; (321 aa)	•						•		0.772
	GSVIVG00002625001	SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (149 aa)			•	•			•		0.765
	GSVIVG00017304001	SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (463 aa)	•						•		0.761
	GSVIVG00024152001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (462 aa)				•			•		0.540
	GSVIVG00026129001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (273 aa)			•	•					0.515
	GSVIVG00014701001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (331 aa)			•	•					0.472
	GSVIVG00006255001	SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (442 aa)			•						0.466
	GSVIVG00013467001	SubName- Full=Chromosome undetermined scaffold_484, whole genome shotgun sequence; (332 aa)			•	•					0.456
	GSVIVG00026973001	SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (166 aa)			•	•					0.452

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	148
pfam02943	105	pfam02943, FeThRed_B, Ferredoxin thioredoxin reduc	1e-60
CHL00165	116	CHL00165, ftrB, ferredoxin thioreductase subunit b	2e-60
COG4802	110	COG4802, FtrB, Ferredoxin-thioredoxin reductase, c	1e-35

>gnl|CDD|145870 pfam02943, FeThRed_B, Ferredoxin thioredoxin reductase catalytic beta chain

 Score =  182 bits (463), Expect = 1e-60
 Identities = 71/105 (67%), Positives = 82/105 (78%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           KS+E MRKF+E+YA+RS T+FC D  VT+VVI+GLA HKD  G PLCPCRHY+DK AE  
Sbjct: 1   KSLEKMRKFAEKYAKRSGTYFCPDPEVTAVVIEGLARHKDRYGKPLCPCRHYEDKEAEVS 60

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKEST 145
              W CPCVPMRERKECHC LFLTPEN FAG+ Q I  +EIKE +
Sbjct: 61  ADDWICPCVPMRERKECHCGLFLTPENLFAGERQEIEKEEIKEVS 105

Length = 105

>gnl|CDD|214382 CHL00165, ftrB, ferredoxin thioreductase subunit beta; Validated

 Score =  181 bits (461), Expect = 2e-60
 Identities = 68/103 (66%), Positives = 84/103 (81%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           +S+E MRKF+E YA+R++TFFC D S+T+VVI+GLA HKD  GAPLCPCRHY+DK  E  
Sbjct: 11  ESLEAMRKFAETYAKRTNTFFCSDLSITAVVIEGLARHKDEYGAPLCPCRHYEDKKVEVS 70

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKE 143
             +WNCPCVPMRERKECHCMLFLTP+N+FA Q Q+IS   + +
Sbjct: 71  AAYWNCPCVPMRERKECHCMLFLTPDNEFASQSQTISKKTLLQ 113

Length = 116

>gnl|CDD|227139 COG4802, FtrB, Ferredoxin-thioredoxin reductase, catalytic subunit [Energy production and conversion]

 Score =  118 bits (298), Expect = 1e-35
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)

Query: 39  SEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAE 98
           S++ +  M +F+EQYA +S      D+  T+ V++GLA +K+  G P CPCR    K  E
Sbjct: 2   SDEELNKMYRFTEQYAEKSGYRLNPDREFTAEVLRGLASNKERYGYPSCPCRLVTGKEEE 61

Query: 99  AQQGFWNCPCVP----MRERKECHCMLFLTPENDFAGQDQSISLDEIK 142
            +     CPCV     +RE  EC+C L+L+PE D A   QSI     +
Sbjct: 62  DKD--IVCPCVYRDDDIREYGECYCGLYLSPEKDEA---QSIPERRAE 104

Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
CHL00165	116	ftrB ferredoxin thioreductase subunit beta; Valida	100.0
PF02943	108	FeThRed_B: Ferredoxin thioredoxin reductase cataly	100.0
COG4802	110	FtrB Ferredoxin-thioredoxin reductase, catalytic s	100.0

>CHL00165 ftrB ferredoxin thioreductase subunit beta; Validated

Probab=100.00  E-value=5.5e-50  Score=303.66  Aligned_cols=112  Identities=61%  Similarity=1.173  Sum_probs=107.7

Q ss_pred             cCCCChHHHHHHHHHHHHHhhhcCcEeccChhhHHHHHHHHHHhHhhhCCCCCCCcccCCchhhhhCCceeecCcccccC
Q 032076           35 QVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRER  114 (148)
Q Consensus        35 ~~~~s~k~~e~~~~~~ekyAek~Gy~lNPD~ev~~~Vi~GLa~NK~rYG~~~CPCRl~~dke~E~~d~diICPC~y~~e~  114 (148)
                      +...+++++++|++|+++||+++||+||||+++|+.|++|||+||++||+||||||+++|+++|+++++|||||++|+++
T Consensus         5 ~~~~~~~~~e~m~~f~ekya~~~G~~fnpD~~vt~~Vi~GLa~nK~~yG~p~CPCR~~~~k~~e~~~~~~iCPCv~m~e~   84 (116)
T CHL00165          5 NEKSKPESLEAMRKFAETYAKRTNTFFCSDLSITAVVIEGLARHKDEYGAPLCPCRHYEDKKVEVSAAYWNCPCVPMRER   84 (116)
T ss_pred             ccccchhhHHHHHHHHHHHHHHhCCeeCCCHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCcHHHhhcCCeecCCHhHHHc
Confidence            56789999999999999999999999999999999999999999999999999999999999998888899999999999


Q ss_pred             ceeeeeeeecCCCCCCCCcccccHHHHHHhhh
Q 032076          115 KECHCMLFLTPENDFAGQDQSISLDEIKESTA  146 (148)
Q Consensus       115 G~ChCgLFvs~e~~~~g~~q~i~~~~~~~~~~  146 (148)
                      |+|||||||++|+.|+|+.|.|++++|.+++.
T Consensus        85 g~CHC~LF~t~e~~~~~~~~~i~~~~~~~~~~  116 (116)
T CHL00165         85 KECHCMLFLTPDNEFASQSQTISKKTLLQNII  116 (116)
T ss_pred             CCceEeeeecCCccccCcceeecHHHHHHhcC
Confidence            99999999999999999999999999998763

>PF02943 FeThRed_B: Ferredoxin thioredoxin reductase catalytic beta chain; InterPro: IPR004209 Ferredoxin thioredoxin reductase is a [4FE-4S] protein present in organisms performing oxygenic photosynthesis, and plays an important role in the ferredoxin/thioredoxin regulatory chain

Probab=100.00  E-value=6.3e-46  Score=277.97  Aligned_cols=103  Identities=45%  Similarity=0.758  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHhhhcCcEeccChhhHHHHHHHHHHhHhhhCCCCCCCcccCCchhhhhCCceeecCcccc----cCce
Q 032076           41 KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMR----ERKE  116 (148)
Q Consensus        41 k~~e~~~~~~ekyAek~Gy~lNPD~ev~~~Vi~GLa~NK~rYG~~~CPCRl~~dke~E~~d~diICPC~y~~----e~G~  116 (148)
                      |++++|++|+++||+++||+||||+++|+.|++||++||++||++|||||+++|++++++|++|||||++++    ++|+
T Consensus         1 ~~le~~~~~~~~~a~~~G~~~NpD~~~~~~v~~GL~~nk~~yG~~~CPCr~~~~~~ee~~d~~iiCPC~~~r~~~~~~G~   80 (108)
T PF02943_consen    1 KELEKMYKFLEKYAEKSGYKLNPDEEVTDDVLEGLARNKERYGYPYCPCRLASGKEEEVKDRDIICPCVPYREDDIEYGH   80 (108)
T ss_dssp             HHHHHHHHHHHHHHHHTT-B-BSSHHHHHHHHHHHHHHHHHHSS-B-SSC--S-HHHHHHH-TTBSS-HHHHHH------
T ss_pred             ChHHHHHHHHHHHHHHhCCEECCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCchhhhccCCeecCCHHHHhhcccccc
Confidence            689999999999999999999999999999999999999999999999999999888888999999999632    7999


Q ss_pred             eeeeeeecCCCCCCCCcccccHHHHHH
Q 032076          117 CHCMLFLTPENDFAGQDQSISLDEIKE  143 (148)
Q Consensus       117 ChCgLFvs~e~~~~g~~q~i~~~~~~~  143 (148)
                      |||||||+++++++++.|+|+.++|.+
T Consensus        81 ChC~Lf~~~e~~~~~~~~~~~~e~~~~  107 (108)
T PF02943_consen   81 CHCGLFVSPEYAEAGKKQEISHEEIEK  107 (108)
T ss_dssp             -TTSSSB-TTSTTB-S-S---HHHHHH
T ss_pred             ceEeeeECcccccchhhcccCHHHhhc
Confidence            999999999999999999999999975

It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin), regulating enzymes by reduction of specific disulphide groups. It catalyses the light-dependent activation of several photosynthetis enzymes. Ferredoxin thioredoxin reductase is a heterodimer of subunit alpha and subunit beta. Subunit alpha is the variable subunit, and beta is the catalytic chain []. The structure of the beta subunit has been determined and found to fold around the FeS cluster [].; GO: 0008937 ferredoxin-NAD(P) reductase activity, 0055114 oxidation-reduction process; PDB: 2PUK_E 2PVD_A 2PVG_A 2PUO_A 2PU9_A 1DJ7_A 2PVO_A.

>COG4802 FtrB Ferredoxin-thioredoxin reductase, catalytic subunit [Energy production and conversion]

Probab=100.00  E-value=2.8e-42  Score=258.17  Aligned_cols=98  Identities=41%  Similarity=0.725  Sum_probs=92.8

Q ss_pred             ChHHHHHHHHHHHHHhhhcCcEeccChhhHHHHHHHHHHhHhhhCCCCCCCcccCCchhhhhCCceeecCcc----cccC
Q 032076           39 SEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVP----MRER  114 (148)
Q Consensus        39 s~k~~e~~~~~~ekyAek~Gy~lNPD~ev~~~Vi~GLa~NK~rYG~~~CPCRl~~dke~E~~d~diICPC~y----~~e~  114 (148)
                      +++++++||+|+++||+|+||+||||.++|+.|++|||.||++||+++||||+++|+++|  |++|||||+|    |++|
T Consensus         2 ~~e~l~~my~~~eq~AeksG~~lnpD~e~~~~v~~gL~~~ke~yG~~~CPCRl~~g~eee--dk~ivCPCvy~~ddi~e~   79 (110)
T COG4802           2 SDEELNKMYRFTEQYAEKSGYRLNPDREFTAEVLRGLASNKERYGYPSCPCRLVTGKEEE--DKDIVCPCVYRDDDIREY   79 (110)
T ss_pred             cHHHHHHHHHHHHHHHHhcCceeCCCHHHHHHHHHHHHHhHHHhCCCCCCeecccCCHHH--hhceeccCcCCccchhhh
Confidence            689999999999999999999999999999999999999999999999999999998888  6789999999    8999


Q ss_pred             ceeeeeeeecCCCCCCCCcccccHHHH
Q 032076          115 KECHCMLFLTPENDFAGQDQSISLDEI  141 (148)
Q Consensus       115 G~ChCgLFvs~e~~~~g~~q~i~~~~~  141 (148)
                      |.||||||++++..   +.|.||...+
T Consensus        80 g~C~C~Lyl~~e~~---e~~sIp~r~~  103 (110)
T COG4802          80 GECYCGLYLSPEKD---EAQSIPERRA  103 (110)
T ss_pred             CceeEEEEeccccc---chhhcchhhH
Confidence            99999999999987   6788887776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	148
1dj7_A	117	Crystal Structure Of Ferredoxin Thioredoxin Reducta		2e-42
2pu9_A	110	Crystal Srtucture Of The Binary Complex Between Fer		3e-42
2puk_A	109	Crystal Srtucture Of The Binary Complex Between Fer		1e-41
2pvd_A	107	Crystal Srtucture Of The Reduced Ferredoxin:thiored		2e-41
2pvg_A	108	Crystal Srtucture Of The Binary Complex Between Fer		3e-41

>pdb|1DJ7|A Chain A, Crystal Structure Of Ferredoxin Thioredoxin Reductase Length = 117

Iteration: 1
 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 91/110 (82%)
Query: 39  SEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAE 98
           + K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE
Sbjct: 7   NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAE 66
Query: 99  AQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
            +  FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+M
Sbjct: 67  VKNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKASM 116

>pdb|2PU9|A Chain A, Crystal Srtucture Of The Binary Complex Between Ferredoxin: Thioredoxin Reductase And Thioredoxin F Length = 110

Iteration: 1
 Score =  167 bits (422), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 90/108 (83%)
Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE +
Sbjct: 2   KTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVK 61
Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
             FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+M
Sbjct: 62  NTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKASM 109

>pdb|2PUK|A Chain A, Crystal Srtucture Of The Binary Complex Between Ferredoxin: Thioredoxin Reductase And Thioredoxin M Length = 109

Iteration: 1
 Score =  164 bits (416), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 70/109 (64%), Positives = 90/109 (82%)
Query: 39  SEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAE 98
           + K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE
Sbjct: 1   NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAE 60
Query: 99  AQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN 147
            +  FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+
Sbjct: 61  VKNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKAS 109

>pdb|2PVD|A Chain A, Crystal Srtucture Of The Reduced Ferredoxin:thioredoxin Reductase Length = 107

Iteration: 1
 Score =  164 bits (414), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 86/103 (83%)
Query: 46  MRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWN 105
           M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY DK AE +  FWN
Sbjct: 4   MKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYADKEAEVKNTFWN 63
Query: 106 CPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+M
Sbjct: 64  CPCVPMRERKECHCMLFLTPDNDFAGDAQGIPMETLEEKKASM 106

>pdb|2PVG|A Chain A, Crystal Srtucture Of The Binary Complex Between Ferredoxin And Ferredoxin:thioredoxin Reductase Length = 108

Iteration: 1
 Score =  163 bits (412), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 88/106 (83%)
Query: 42  SVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQ 101
           ++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE + 
Sbjct: 3   TLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKN 62
Query: 102 GFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN 147
            FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+
Sbjct: 63  TFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEKKAS 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
1dj7_A	117	Ferredoxin thioredoxin reductase: catalytic chain;	1e-52

>1dj7_A Ferredoxin thioredoxin reductase: catalytic chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: g.36.1.1 PDB: 2pu9_A 2pvo_A 2puo_A 2puk_A 2pvg_A 2pvd_A Length = 117

 Score =  161 bits (409), Expect = 1e-52
 Identities = 71/115 (61%), Positives = 92/115 (80%)

Query: 34  AQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYD 93
           +    + K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+
Sbjct: 2   SSDTQNNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYE 61

Query: 94  DKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           DK AE +  FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+M
Sbjct: 62  DKEAEVKNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKASM 116

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
1dj7_A	117	Ferredoxin thioredoxin reductase: catalytic chain;	100.0

>1dj7_A Ferredoxin thioredoxin reductase: catalytic chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: g.36.1.1 PDB: 2pu9_A 2pvo_A 2puo_A 2puk_A 2pvg_A 2pvd_A

Probab=100.00  E-value=5.5e-50  Score=302.87  Aligned_cols=115  Identities=62%  Similarity=1.215  Sum_probs=104.7

Q ss_pred             ccCCCChHHHHHHHHHHHHHhhhcCcEeccChhhHHHHHHHHHHhHhhhCCCCCCCcccCCchhhhhCCceeecCccccc
Q 032076           34 AQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRE  113 (148)
Q Consensus        34 ~~~~~s~k~~e~~~~~~ekyAek~Gy~lNPD~ev~~~Vi~GLa~NK~rYG~~~CPCRl~~dke~E~~d~diICPC~y~~e  113 (148)
                      ..++++++++++|++|+++||+++||+||||+++|+.|++||++||++||+||||||++.|+++|++.++|||||+||++
T Consensus         2 ~~~~~~~~~~e~~~~f~ek~ae~~G~~~NpD~evt~~vi~GLa~nk~~yG~~~CPCR~~gdke~d~~~~~iiCPC~~~re   81 (117)
T 1dj7_A            2 SSDTQNNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKNTFWNCPCVPMRE   81 (117)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHTTCBCBSSHHHHHHHHHHHHHHHHHHSSCBCSSSCCSCHHHHHHHCTTBSSCHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhCCEECCCHHHHHHHHHHHHHHHHHhCCCCCCCcCCCChhhhcccCCeecCCcChhh
Confidence            35678999999999999999999999999999999999999999999999999999999767776666779999999999


Q ss_pred             CceeeeeeeecCCCCCCCCcccccHHHHHHhhhcC
Q 032076          114 RKECHCMLFLTPENDFAGQDQSISLDEIKESTANM  148 (148)
Q Consensus       114 ~G~ChCgLFvs~e~~~~g~~q~i~~~~~~~~~~~~  148 (148)
                      +|+|||||||+++|+|+|+.|.|++++|.+.+.+|
T Consensus        82 ~G~ChC~Lfvt~e~~~~g~~~~i~~~~~~~~~~~~  116 (117)
T 1dj7_A           82 RKECHCMLFLTPDNDFAGDAQDIPMETLEEVKASM  116 (117)
T ss_dssp             HCCCTTSSSBCTTSTTBCSCSCCCHHHHHHHHHC-
T ss_pred             cCceeEeeeecccccccCccccccHHHHHHHHhhc
Confidence            99999999999999999999999999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d2pu9a1	108	g.36.1.1 (A:8-115) Ferredoxin thioredoxin reductas	1e-54

>d2pu9a1 g.36.1.1 (A:8-115) Ferredoxin thioredoxin reductase (FTR), catalytic beta chain {Synechocystis sp. [TaxId: 1143]} Length = 108

class: Small proteins
fold: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
superfamily: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
family: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
domain: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
species: Synechocystis sp. [TaxId: 1143]

 Score =  165 bits (419), Expect = 1e-54
 Identities = 70/108 (64%), Positives = 89/108 (82%)

Query: 40  EKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEA 99
            K++  M+ F+EQYA+R+DT+FC D SVT+VVI+GLA HK+ LG+PLCPCRHY+DK AE 
Sbjct: 1   NKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEV 60

Query: 100 QQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN 147
           +  FWNCPCVPMRERKECHCMLFLTP+NDFAG  Q I ++ ++E  A+
Sbjct: 61  KNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKAS 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d2pu9a1	108	Ferredoxin thioredoxin reductase (FTR), catalytic	100.0

>d2pu9a1 g.36.1.1 (A:8-115) Ferredoxin thioredoxin reductase (FTR), catalytic beta chain {Synechocystis sp. [TaxId: 1143]}

class: Small proteins
fold: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
superfamily: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
family: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
domain: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=8e-50  Score=296.83  Aligned_cols=107  Identities=65%  Similarity=1.293  Sum_probs=103.4

Q ss_pred             hHHHHHHHHHHHHHhhhcCcEeccChhhHHHHHHHHHHhHhhhCCCCCCCcccCCchhhhhCCceeecCcccccCceeee
Q 032076           40 EKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHC  119 (148)
Q Consensus        40 ~k~~e~~~~~~ekyAek~Gy~lNPD~ev~~~Vi~GLa~NK~rYG~~~CPCRl~~dke~E~~d~diICPC~y~~e~G~ChC  119 (148)
                      +|++++|++|+++||+++||+||||+++|+.|++|||+||++||++|||||+++|+++|++++.|||||+||+++|+|||
T Consensus         1 dk~le~~~~f~e~ya~~~G~~~npD~~v~~~vi~GLa~nk~~yG~~~CPCr~~~gk~ee~k~~~~iCPC~~~~e~g~ChC   80 (108)
T d2pu9a1           1 NKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKNTFWNCPCVPMRERKECHC   80 (108)
T ss_dssp             CHHHHHHHHHHHHHHHHHTCBCBSSHHHHHHHHHHHHHHHHHHSSCBCTTBCCSCHHHHHHHCTTBSSCHHHHHHCCCTT
T ss_pred             ChhHHHHHHHHHHHHHHcCceeCCCHHHHHHHHHHHHHHHHHcCCCCCCcccCCCcHHHhhcCceecCCcChhhcCeeeE
Confidence            58999999999999999999999999999999999999999999999999999999999888889999999999999999


Q ss_pred             eeeecCCCCCCCCcccccHHHHHHhhh
Q 032076          120 MLFLTPENDFAGQDQSISLDEIKESTA  146 (148)
Q Consensus       120 gLFvs~e~~~~g~~q~i~~~~~~~~~~  146 (148)
                      ||||++|+.|+|+.|+|+.+||.+..+
T Consensus        81 ~Lf~t~e~~~~~~~q~i~~~e~~~~~~  107 (108)
T d2pu9a1          81 MLFLTPDNDFAGDAQDIPMETLEEVKA  107 (108)
T ss_dssp             SSSBCTTCTTBCSCSCCCHHHHHHHHH
T ss_pred             EEEecccccccccccccCHHHHhhhcc
Confidence            999999999999999999999998654