Citrus Sinensis ID: 032106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISKFSQKPDSSEKIDQK
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcccccccHHHHHccccccccHHHHHHHHHHccccccEEEEccccccHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHccccccccHEEEcccccccHHHHHHHHHHccccHHHEEEEcccHccHHHHHHccEEEEEEcccccHHHHHHHHHHHHHHHccccccHHHHHHHccccccccHHHccc
Coil and Loop (DISEMBL)
MPSLYPHAKGILHALKDKGIdvavasrspspdiaNTFLEKLNIKSMFVAKEIfsswshktdhfqrihsrtgvpfnsmlffddedrniDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISKfsqkpdssekidqk
Flexible Loop (DISEMBL)
MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQkwiskfsqkpdssekidqk
Low Complexity Region (SEG)
MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISKFSQKPDSSEKIDQK
Disordered region (IsUnstruct)
*********GILHALKDKGIDVAVA******DIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW***************************
Disordered Region (DISOPRED)
*PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLT*********************************
Disordered Region (DISEMBL)
MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW***************************
Disordered Region (DISPRO)
*PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN**************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISKFSQKPDSSEKIDQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q86V88	176	Magnesium-dependent phosp	no	no	0.768	0.642	0.443	3e-21
Q9D967	164	Magnesium-dependent phosp	yes	no	0.768	0.689	0.426	4e-21
O94279	172	Putative magnesium-depend	no	no	0.632	0.540	0.356	7e-10
Q3YWN8	252	Phosphoglycolate phosphat	yes	no	0.700	0.408	0.271	8e-05
P32662	252	Phosphoglycolate phosphat	N/A	no	0.700	0.408	0.271	8e-05
Q31VP9	252	Phosphoglycolate phosphat	yes	no	0.700	0.408	0.271	8e-05
Q83PX1	252	Phosphoglycolate phosphat	yes	no	0.700	0.408	0.271	8e-05
Q8FCW0	252	Phosphoglycolate phosphat	yes	no	0.700	0.408	0.271	8e-05
P58422	252	Phosphoglycolate phosphat	N/A	no	0.700	0.408	0.271	8e-05
Q32AJ7	252	Phosphoglycolate phosphat	yes	no	0.700	0.408	0.271	9e-05

>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 2/115 (1%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
           LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct: 47  LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHF 104

Query: 64  QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
           +R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QGL  F++
Sbjct: 105 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 159

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
           LYP    +L  L+  G+ VA ASR+     AN  LE  ++   F+ +EI+     K  HF
Sbjct: 47  LYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHF 104

Query: 64  QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
           +R+H +TGVPF+ M+FFDDE+RNI  V ++GVT I + +G++L  L QGL  F++
Sbjct: 105 ERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.31 PE=1 SV=2

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 8/101 (7%)

Query: 3   SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK---SMFVAKEIFS---SW 56
             Y    GIL  L+++ + + VASR+ +P  A   L  + +    S+  A E F+   +W
Sbjct: 51  CFYSDITGILQELRNQKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAW 110

Query: 57  -SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT 96
              K DHF+ IH+ +G+ +  M+FFDDE RN + V ++GVT
Sbjct: 111 PGSKMDHFKEIHNESGIDYREMVFFDDESRNRE-VERLGVT 150

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046) GN=SSON_3516 PE=3 SV=1

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Shigella sonnei (strain Ss046) (taxid: 300269)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12) GN=gph PE=1 SV=1

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate (2P-Gly). Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q31VP9|GPH_SHIBS Phosphoglycolate phosphatase OS=Shigella boydii serotype 4 (strain Sb227) GN=SBO_3372 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Shigella boydii serotype 4 (strain Sb227) (taxid: 300268)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q83PX1|GPH_SHIFL Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Shigella flexneri (taxid: 623)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|P58422|GPH_ECO57 Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph PE=3 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Escherichia coli O157:H7 (taxid: 83334)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=SDY_3694 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
           L+PH    L AL+ KG+ + + +  P+P +A   LE L+I   F   +  +   +     
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
           D    +  R G+    MLF  D   +I A    G   + +  G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Shigella dysenteriae serotype 1 (strain Sd197) (taxid: 300267)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
255563310	189	Magnesium-dependent phosphatase, putativ	0.965	0.751	0.839	3e-64
351726361	191	uncharacterized protein LOC100305763 [Gl	0.959	0.738	0.773	2e-61
388491232	192	unknown [Lotus japonicus]	0.952	0.729	0.778	1e-60
388511581	192	unknown [Lotus japonicus]	0.952	0.729	0.778	1e-60
224141149	190	predicted protein [Populus trichocarpa]	0.986	0.763	0.746	1e-59
449438224	188	PREDICTED: magnesium-dependent phosphata	0.979	0.765	0.758	2e-59
224141151	190	predicted protein [Populus trichocarpa]	0.986	0.763	0.746	2e-59
297831880	192	hypothetical protein ARALYDRAFT_480332 [	0.965	0.739	0.753	8e-59
79555268	190	haloacid dehalogenase-like hydrolase dom	0.965	0.747	0.753	9e-59
357445983	197	Magnesium-dependent phosphatase [Medicag	0.952	0.710	0.764	1e-58

>gi|255563310|ref|XP_002522658.1| Magnesium-dependent phosphatase, putative [Ricinus communis] gi|223538134|gb|EEF39745.1| Magnesium-dependent phosphatase, putative [Ricinus communis]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/143 (83%), Positives = 132/143 (92%), Gaps = 1/143 (0%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPSLYPHAKGIL+ALKDKGIDVA+ASRSP+PDIANTFL+KL++KSMFVA+EIFSSW+HKT
Sbjct: 45  MPSLYPHAKGILYALKDKGIDVAIASRSPTPDIANTFLDKLSLKSMFVAQEIFSSWTHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           +HFQRIHSRTGV FNSMLFFDDEDRNI +VSKMGVT ILV NGVNLGALRQGLT+FSQN 
Sbjct: 105 EHFQRIHSRTGVSFNSMLFFDDEDRNIQSVSKMGVTSILVSNGVNLGALRQGLTRFSQNV 164

Query: 121 NTSQKNKQKWISKFSQKPDSSEK 143
           NT QKNKQKW  KFSQ   S+EK
Sbjct: 165 NTIQKNKQKW-QKFSQNSKSAEK 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726361|ref|NP_001236356.1| uncharacterized protein LOC100305763 [Glycine max] gi|255626551|gb|ACU13620.1| unknown [Glycine max]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/141 (77%), Positives = 128/141 (90%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           +PSLYPHAKGIL ALK+KGID+A+ASRSP+ DIA  FL KLN+  MFV++EI+SSW+HKT
Sbjct: 47  IPSLYPHAKGILLALKEKGIDIAIASRSPTADIATAFLNKLNLTPMFVSQEIYSSWTHKT 106

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           DHFQRIHSRT VPFNSMLFFDDE+RNI AVSKMGVT ILVG+GVNLG+LR+GLT+FS+NW
Sbjct: 107 DHFQRIHSRTSVPFNSMLFFDDENRNIQAVSKMGVTSILVGDGVNLGSLREGLTQFSRNW 166

Query: 121 NTSQKNKQKWISKFSQKPDSS 141
           N SQKNKQKW+SK+S K D+S
Sbjct: 167 NASQKNKQKWLSKYSNKSDTS 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491232|gb|AFK33682.1| unknown [Lotus japonicus]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/140 (77%), Positives = 125/140 (89%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTD 61
           PSLYPHAKGIL ALK KGIDVA+ASRSP+ DIAN FL KLN+ SMFVAKEIFSSW+HKTD
Sbjct: 49  PSLYPHAKGILMALKQKGIDVAIASRSPTSDIANAFLNKLNLNSMFVAKEIFSSWTHKTD 108

Query: 62  HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN 121
           HF RIHS TGVPF+SMLFFDDE+RNI AVSKMGVT ILVGNGVNLG+L +GL +F++NWN
Sbjct: 109 HFHRIHSTTGVPFSSMLFFDDENRNIQAVSKMGVTSILVGNGVNLGSLTEGLAQFARNWN 168

Query: 122 TSQKNKQKWISKFSQKPDSS 141
            SQKNKQKW++ +S KP++S
Sbjct: 169 ASQKNKQKWLTDYSNKPNTS 188

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511581|gb|AFK43852.1| unknown [Lotus japonicus]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/140 (77%), Positives = 125/140 (89%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTD 61
           PSLYPHAKGIL ALK KGIDVA+ASRSP+ DIAN FL KLN+ SMFVAKEIFSSW+HKTD
Sbjct: 49  PSLYPHAKGILMALKQKGIDVAIASRSPTSDIANAFLNKLNLNSMFVAKEIFSSWTHKTD 108

Query: 62  HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN 121
           HF RIHS TGVPF+SMLFFDDE+RNI AVSKMGVT ILVGNGVNLG+L +GL +F++NWN
Sbjct: 109 HFHRIHSTTGVPFSSMLFFDDENRNIQAVSKMGVTSILVGNGVNLGSLTEGLAQFARNWN 168

Query: 122 TSQKNKQKWISKFSQKPDSS 141
            SQKNKQKW++ +S KP++S
Sbjct: 169 ASQKNKQKWLTDYSNKPNTS 188

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141149|ref|XP_002323937.1| predicted protein [Populus trichocarpa] gi|222866939|gb|EEF04070.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 133/146 (91%), Gaps = 1/146 (0%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPSL+P AKGIL+ALK+KGID+A+ASRS + DIA TF++KL++K MFVA+EIF+SW+HKT
Sbjct: 45  MPSLFPQAKGILYALKEKGIDMAIASRSSTSDIAKTFIDKLSLKPMFVAQEIFASWTHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           DHFQRIH+RTG+PFNSMLFFDDEDRNI +VSKMGVT ILVG+GVNLGALRQGLT+FSQN 
Sbjct: 105 DHFQRIHTRTGIPFNSMLFFDDEDRNIQSVSKMGVTSILVGDGVNLGALRQGLTEFSQNA 164

Query: 121 NTSQKNKQKWISKFSQKPDSSEKIDQ 146
           + S+KNKQ+W  K+SQ P+SSEK D+
Sbjct: 165 SKSEKNKQRW-QKYSQNPNSSEKKDE 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438224|ref|XP_004136889.1| PREDICTED: magnesium-dependent phosphatase 1-like [Cucumis sativus] gi|449478847|ref|XP_004155433.1| PREDICTED: magnesium-dependent phosphatase 1-like [Cucumis sativus]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 127/145 (87%), Gaps = 1/145 (0%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPS+YPHAK IL+ALKDKGID+A+ASRSP+ DIA TF+ KL I+SMFVA+EIFSSW+HKT
Sbjct: 45  MPSMYPHAKSILYALKDKGIDLAIASRSPTSDIAKTFIGKLGIESMFVAQEIFSSWTHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           DHFQRIHSRTGVPF SMLFFDDEDRNI+ V KMGVT ILVGNGVNLGALRQGLT +SQN 
Sbjct: 105 DHFQRIHSRTGVPFKSMLFFDDEDRNIETVGKMGVTSILVGNGVNLGALRQGLTSYSQNV 164

Query: 121 NTSQKNKQKWISKFSQKPDSSEKID 145
           N  +KNK+KW +K++Q   SSEK +
Sbjct: 165 NKIEKNKKKW-AKYTQNSSSSEKTE 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141151|ref|XP_002323938.1| predicted protein [Populus trichocarpa] gi|222866940|gb|EEF04071.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 132/146 (90%), Gaps = 1/146 (0%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPSL+P AKGIL+ALK+KGID+A+ASRS + DIA TF++KL++K MFVA+EIF+SW+HKT
Sbjct: 45  MPSLFPQAKGILYALKEKGIDMAIASRSSTSDIAKTFIDKLSLKPMFVAQEIFASWTHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           DHFQRIH+RTG+PFNSMLFFDDEDRNI +VSKMGVT ILVG+GVNLGALRQGLT+FSQN 
Sbjct: 105 DHFQRIHTRTGIPFNSMLFFDDEDRNIQSVSKMGVTSILVGDGVNLGALRQGLTEFSQNA 164

Query: 121 NTSQKNKQKWISKFSQKPDSSEKIDQ 146
           + S+KNKQ+W  K+SQ P SSEK D+
Sbjct: 165 SKSEKNKQRW-QKYSQNPSSSEKKDE 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831880|ref|XP_002883822.1| hypothetical protein ARALYDRAFT_480332 [Arabidopsis lyrata subsp. lyrata] gi|297329662|gb|EFH60081.1| hypothetical protein ARALYDRAFT_480332 [Arabidopsis lyrata subsp. lyrata]

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 126/142 (88%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPS+YP AKGIL ALK+KGI++A+ASRSP+ DIANTFL+KLNIK MFVAKEI+SSWSHKT
Sbjct: 45  MPSMYPQAKGILSALKEKGIEMAIASRSPTSDIANTFLDKLNIKPMFVAKEIYSSWSHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           +HFQ+IH+RTGVPF +MLFFDDEDRNI +VSKMGVT ILVG+GV LGA RQGLT+F+QN 
Sbjct: 105 EHFQKIHTRTGVPFTAMLFFDDEDRNIKSVSKMGVTSILVGDGVTLGAFRQGLTEFTQNH 164

Query: 121 NTSQKNKQKWISKFSQKPDSSE 142
           N+ +KNKQ W  K+S KP SSE
Sbjct: 165 NSIEKNKQVWRDKYSGKPTSSE 186

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79555268|ref|NP_179027.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|48310074|gb|AAT41748.1| At2g14110 [Arabidopsis thaliana] gi|50198845|gb|AAT70452.1| At2g14110 [Arabidopsis thaliana] gi|330251187|gb|AEC06281.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  231 bits (588), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 126/142 (88%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
           MPS+YP AKGIL ALK+KGI++A+ASRSP+ DIANTFL+KLNIK MFVAKEI+SSWSHKT
Sbjct: 45  MPSMYPQAKGILSALKEKGIEMAIASRSPTSDIANTFLDKLNIKPMFVAKEIYSSWSHKT 104

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
           +HFQ+IH+RTGVPF +MLFFDDEDRNI +VSKMGVT ILVG+GV LGA RQGLT+F+QN 
Sbjct: 105 EHFQKIHTRTGVPFTAMLFFDDEDRNIKSVSKMGVTSILVGDGVTLGAFRQGLTEFTQNH 164

Query: 121 NTSQKNKQKWISKFSQKPDSSE 142
           N+ +KNKQ W  K+S KP SSE
Sbjct: 165 NSIEKNKQVWRDKYSGKPTSSE 186

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445983|ref|XP_003593269.1| Magnesium-dependent phosphatase [Medicago truncatula] gi|87162746|gb|ABD28541.1| HAD-superfamily phosphatase subfamily IIIC; TonB box, N-terminal [Medicago truncatula] gi|355482317|gb|AES63520.1| Magnesium-dependent phosphatase [Medicago truncatula]

 Score =  230 bits (586), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/140 (76%), Positives = 123/140 (87%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTD 61
           PSLYPHA GIL ALK KGID+A+ASRSP+ DIA  F+ KL I S FVA+EI+SSW+HKTD
Sbjct: 48  PSLYPHAMGILLALKHKGIDIAIASRSPTADIAKAFINKLGITSFFVAQEIYSSWTHKTD 107

Query: 62  HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN 121
           HFQ+IHS TGVPF+SMLFFDDE+RNI  VSKMGVT ILV NGVNLGAL QGLT+FS+NWN
Sbjct: 108 HFQKIHSATGVPFSSMLFFDDENRNIQTVSKMGVTSILVDNGVNLGALSQGLTQFSRNWN 167

Query: 122 TSQKNKQKWISKFSQKPDSS 141
           TSQKNKQKW+S +S+KPD+S
Sbjct: 168 TSQKNKQKWLSDYSKKPDTS 187

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2059440	190	AT2G14110 "AT2G14110" [Arabido	0.965	0.747	0.753	2.9e-55
UNIPROTKB|F1SGN7	164	LOC100520440 "Uncharacterized	0.768	0.689	0.460	3.9e-21
UNIPROTKB|F1MXF2	164	MDP-1 "Uncharacterized protein	0.768	0.689	0.443	4.4e-20
UNIPROTKB|Q86V88	176	MDP1 "Magnesium-dependent phos	0.768	0.642	0.443	5.7e-20
MGI|MGI:1915131	164	Mdp1 "magnesium-dependent phos	0.768	0.689	0.426	5.7e-20
RGD|1311147	164	Mdp1 "magnesium-dependent phos	0.768	0.689	0.434	5.7e-20
UNIPROTKB|E9PL57	170	NEDD8-MDP1 "Protein NEDD8-MDP1	0.727	0.629	0.449	6.5e-19
ZFIN|ZDB-GENE-090311-51	160	si:dkeyp-27c8.2 "si:dkeyp-27c8	0.768	0.706	0.365	7.7e-16
UNIPROTKB|Q32PA3	127	MDP-1 "Uncharacterized protein	0.619	0.716	0.451	3.3e-15
ASPGD|ASPL0000029748	215	AN5512 [Emericella nidulans (t	0.863	0.590	0.328	3.8e-14

TAIR|locus:2059440 AT2G14110 "AT2G14110" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 107/142 (75%), Positives = 126/142 (88%)

Query:     1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
             MPS+YP AKGIL ALK+KGI++A+ASRSP+ DIANTFL+KLNIK MFVAKEI+SSWSHKT
Sbjct:    45 MPSMYPQAKGILSALKEKGIEMAIASRSPTSDIANTFLDKLNIKPMFVAKEIYSSWSHKT 104

Query:    61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
             +HFQ+IH+RTGVPF +MLFFDDEDRNI +VSKMGVT ILVG+GV LGA RQGLT+F+QN 
Sbjct:   105 EHFQKIHTRTGVPFTAMLFFDDEDRNIKSVSKMGVTSILVGDGVTLGAFRQGLTEFTQNH 164

Query:   121 NTSQKNKQKWISKFSQKPDSSE 142
             N+ +KNKQ W  K+S KP SSE
Sbjct:   165 NSIEKNKQVWRDKYSGKPTSSE 186

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1SGN7 LOC100520440 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/115 (46%), Positives = 72/115 (62%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    +L  L+  G+ VA ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct:    47 LYPEVPEVLERLQGLGVPVAAASRTGEVEGANQLLELFDLVRHFVHREIYPG--SKVTHF 104

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+H +TGVPF+ M+FFDDE RNI  VSK+GV  + V NG+NL  L QGL  F++
Sbjct:   105 ERLHRKTGVPFSQMIFFDDEKRNIVDVSKLGVACVHVQNGMNLQTLTQGLEVFAK 159

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|F1MXF2 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 51/115 (44%), Positives = 72/115 (62%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    +L  L+  G+ +A ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct:    47 LYPEVPEVLERLRGLGVPIAAASRTGEVEGANQLLELFDLVRYFVHREIYPG--SKVTHF 104

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+  +TGVPF+ M+FFDDE RNI  VSK+GVT I V +G++L  L QGL  F++
Sbjct:   105 ERLQRKTGVPFSQMIFFDDEKRNIVDVSKLGVTCIHVQHGMSLQTLTQGLDAFTK 159

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q86V88 MDP1 "Magnesium-dependent phosphatase 1" [Homo sapiens (taxid:9606)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 51/115 (44%), Positives = 71/115 (61%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct:    47 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHF 104

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QGL  F++
Sbjct:   105 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 159

GO:0046872 "metal ion binding" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

MGI|MGI:1915131 Mdp1 "magnesium-dependent phosphatase 1" [Mus musculus (taxid:10090)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 49/115 (42%), Positives = 72/115 (62%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    +L  L+  G+ VA ASR+     AN  LE  ++   F+ +EI+     K  HF
Sbjct:    47 LYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHF 104

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+H +TGVPF+ M+FFDDE+RNI  V ++GVT I + +G++L  L QGL  F++
Sbjct:   105 ERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016311 "dephosphorylation" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=ISO

GO:0030389 "fructosamine metabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|1311147 Mdp1 "magnesium-dependent phosphatase 1" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 50/115 (43%), Positives = 73/115 (63%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    IL  L+  G+ VA ASR+   + AN  LE  ++   F+ +EI+     K  HF
Sbjct:    47 LYPEVPEILGRLQSLGVPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPG--SKVTHF 104

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+ ++TGVPF+ M+FFDDE+RNI  V K+GVT I + +G++L  L QGL  F++
Sbjct:   105 ERLRNKTGVPFSQMIFFDDENRNIIDVGKLGVTCIHIQDGMSLQMLTQGLETFAK 159

GO:0005575 "cellular_component" evidence=ND

GO:0016311 "dephosphorylation" evidence=IDA

GO:0016791 "phosphatase activity" evidence=IDA

GO:0030389 "fructosamine metabolic process" evidence=IDA

UNIPROTKB|E9PL57 NEDD8-MDP1 "Protein NEDD8-MDP1" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 49/109 (44%), Positives = 67/109 (61%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct:    64 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHF 121

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQG 112
             +R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QG
Sbjct:   122 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQG 170

GO:0016791 "phosphatase activity" evidence=IEA

ZFIN|ZDB-GENE-090311-51 si:dkeyp-27c8.2 "si:dkeyp-27c8.2" [Danio rerio (taxid:7955)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 42/115 (36%), Positives = 65/115 (56%)

Query:     4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
             +Y   + IL +L  +G  + +ASR+   + AN  L   N+      KEI+     K  HF
Sbjct:    46 IYHDTEKILRSLHSQGYKIGIASRTSETEGANQLLSLYNLDQYISFKEIYPG--SKVTHF 103

Query:    64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             +R+ S +GV F+ M+FFDDE+RNI  V ++GVT +LV N +    +   L +FS+
Sbjct:   104 KRLKSASGVQFSDMMFFDDEERNIVEVGRLGVTCVLVFNAITCNLVNTALEQFSK 158

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q32PA3 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 42/93 (45%), Positives = 60/93 (64%)

Query:    26 SRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDR 85
             +R+   + AN  LE  ++   FV +EI+     K  HF+R+  +TGVPF+ M+FFDDE R
Sbjct:    32 NRTGEVEGANQLLELFDLVRYFVHREIYPG--SKVTHFERLQRKTGVPFSQMIFFDDEKR 89

Query:    86 NIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
             NI  VSK+GVT I V +G++L  L QGL  F++
Sbjct:    90 NIVDVSKLGVTCIHVQHGMSLQTLTQGLDAFTK 122

GO:0016791 "phosphatase activity" evidence=IEA

ASPGD|ASPL0000029748 AN5512 [Emericella nidulans (taxid:162425)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 47/143 (32%), Positives = 77/143 (53%)

Query:     3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI-----------KSMFV-AK 50
             + YPH   IL + K + I +A+ASR+ +PD+A   L++L+I           K+  V A 
Sbjct:    72 AFYPHVNSILTSCKSRSIPLALASRTHAPDLARDMLKQLHIIPNFSDNPSANKARTVRAL 131

Query:    51 EIFSSW----SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNL 106
             + F       + KT HF RIH  +G+ +  MLFFDDE RN +  +++GVT +LV +G+  
Sbjct:   132 DYFDYIQIFPATKTQHFSRIHQASGIAYEDMLFFDDEARNRNVETELGVTFLLVRDGMTR 191

Query:   107 GALRQGLTKFSQNWNTSQKNKQK 129
               + +G+  + +     Q   Q+
Sbjct:   192 DEVDKGVWAWRRRNGIKQNQNQE 214

GO:0008150 "biological_process" evidence=ND

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XVII0053 hypothetical protein (191 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
pfam12689	164	pfam12689, Acid_PPase, Acid Phosphatase	1e-52
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	5e-11
TIGR01685	174	TIGR01685, MDP-1, magnesium-dependent phosphatase-	5e-09
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	9e-05
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	2e-04
PRK13225	273	PRK13225, PRK13225, phosphoglycolate phosphatase;	7e-04
TIGR01681	128	TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas	8e-04
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	0.001
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	0.002
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	0.002
PRK09456	199	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro	0.002
COG0560	212	COG0560, SerB, Phosphoserine phosphatase [Amino ac	0.002

>gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase

 Score =  163 bits (416), Expect = 1e-52
 Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 8/124 (6%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI------KSMFVAKEIFSS 55
            SLYP    IL  LK+KGI +AVASR+ +PD A   L+ L+I         F   EI+  
Sbjct: 43  LSLYPDVPSILQELKEKGITIAVASRTDAPDWARELLKLLHINDGPPAIDYFDYLEIYPG 102

Query: 56  WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTK 115
              KT HF++IH ++GVP++ MLFFDDE RNID VS++GVT +LV +G+      +GL K
Sbjct: 103 --SKTTHFKKIHKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVLVPDGLTREEFERGLRK 160

Query: 116 FSQN 119
           + + 
Sbjct: 161 WRKR 164

This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 57.0 bits (138), Expect = 5e-11
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 8/104 (7%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT- 60
              +P    +L  LK KG+ + + S      +    LEKL +  +F    +F+S      
Sbjct: 76  LEPFPDVVELLRRLKAKGVKLVILSNGSREAVER-LLEKLGLLDLF--DAVFTSDDVGAR 132

Query: 61  ----DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
               + ++R+  R G+P   +LF DD   +++A    G+  + V
Sbjct: 133 KPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1

 Score = 51.8 bits (124), Expect = 5e-09
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 3   SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK------------SMFVAK 50
           +L    + +L  LKD G  +A AS +  P+ A   L    I                +  
Sbjct: 45  TLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEI 104

Query: 51  EIFSSWSHKTDHFQRIHSRTGVPFNS--MLFFDDEDRNIDAVSKMGVTGILVGNGVNLGA 108
              +         Q+++           +LFFDD   N+  V   GVT     +G++ G 
Sbjct: 105 YKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGT 164

Query: 109 LRQGLTKFS 117
            ++ L  + 
Sbjct: 165 FKKILEMWR 173

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
                P  + +L AL+ +G  +A+ + SP    A+  L             I SS     
Sbjct: 77  GLKPLPGVRALLEALRARGKKLALLTNSPR---ADAKLVLELGLRALFDVVIDSSDVGLG 133

Query: 61  ----DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
               D + +   + G+  +  LF DD    IDA    G+  +LV
Sbjct: 134 KPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI-KSMFVAKEIFSSWSHKTDH 62
           LYP A+  L  LK+ GI +A+ +       AN     L +  ++  A         K D 
Sbjct: 95  LYPGAREALKELKEAGIKLAILTGDN-RLTANAIARLLGLFDALVSADLYGLVGVGKPDP 153

Query: 63  --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG 94
             F+      GV    +L   D   +I A    G
Sbjct: 154 KIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional

 Score = 38.2 bits (88), Expect = 7e-04
 Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
           L+P    +L  L+ + + + + S +   +I   FL++  ++S+F   +  +    K    
Sbjct: 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNI-EAFLQRQGLRSLFSVVQAGTPILSKRRAL 201

Query: 64  QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
            ++ +R G    ++++  DE R+++A  ++G+  + V  G N    RQ L     +W
Sbjct: 202 SQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFN---DRQSLVAACPDW 255

Length = 273

>gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 12/101 (11%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLE-KLNIKSMFVAKEIFS-----SWS 57
                +  L  LK  G  +A+AS +  P +A   L+   +   +F   E F       W 
Sbjct: 30  TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL 89

Query: 58  HKTDH----FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG 94
            K+        +++        S+LF DD   N + V    
Sbjct: 90  PKSPRLVEIALKLNGVLK--PKSILFVDDRPDNNEEVDYYL 128

This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 20/116 (17%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI-------------------K 44
           LYP  K  L  LK+KGI +A+A+     ++    LE+L +                   +
Sbjct: 25  LYPGVKEALKELKEKGIKLALATNKSRREVL-ELLEELGLDDYFDPVITSNGAAIYYPKE 83

Query: 45  SMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
            +F+    F       D         GV    +L   D   +I+     G  G+ V
Sbjct: 84  GLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 4/111 (3%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT--- 60
           L+P  K +L ALK  G  + + +  P     +  L+ L +   F                
Sbjct: 90  LFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFDVIVGGDDVPPPKPDP 148

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQ 111
           +    +  + G+     L   D   +I A    GV  + V  G N      
Sbjct: 149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELA 199

Length = 220

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF 47
             P    +L  LK +GI +AVAS SP    A   L +L +   F
Sbjct: 87  PIPGVVELLEQLKARGIPLAVASSSP-RRAAERVLARLGLLDYF 129

Length = 221

>gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 63  FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
           +Q +    G      +FFDD   NI+A + +G+T ILV
Sbjct: 147 YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILV 184

Length = 199

>gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI 43
             L P A+ ++ ALK  G  V + S   +  +     E+L I
Sbjct: 76  LRLTPGAEELVAALKAAGAKVVIISGGFTF-LVEPIAERLGI 116

Length = 212

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.87
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.87
PRK13288	214	pyrophosphatase PpaX; Provisional	99.86
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.86
COG0546	220	Gph Predicted phosphatases [General function predi	99.86
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.85
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.85
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.85
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.85
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.85
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.85
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.84
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.84
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.84
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.84
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.84
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.84
PLN02575	381	haloacid dehalogenase-like hydrolase	99.84
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.83
PLN02811	220	hydrolase	99.83
PRK11587	218	putative phosphatase; Provisional	99.82
PRK06769	173	hypothetical protein; Validated	99.82
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.82
PRK09449	224	dUMP phosphatase; Provisional	99.82
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.81
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.81
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.81
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.81
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.8
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.8
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.8
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.8
PLN02940	382	riboflavin kinase	99.8
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.8
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.79
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.79
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.79
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.79
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.79
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.79
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.79
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.78
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.78
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.78
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.77
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.76
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.75
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.73
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.72
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.71
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.71
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.7
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.7
PHA02530	300	pseT polynucleotide kinase; Provisional	99.69
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.69
PHA02597	197	30.2 hypothetical protein; Provisional	99.67
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.67
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.65
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.64
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.63
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.61
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.61
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.59
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.57
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.56
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.56
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.56
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.56
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.55
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.51
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.51
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.5
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.5
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.5
PLN02954	224	phosphoserine phosphatase	99.5
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.47
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.47
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.45
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.44
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.42
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.41
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.38
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.36
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.33
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.32
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.31
PRK10444	248	UMP phosphatase; Provisional	99.31
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.3
PTZ00445	219	p36-lilke protein; Provisional	99.28
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.28
PLN02645	311	phosphoglycolate phosphatase	99.24
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.24
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.22
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.19
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	99.18
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.17
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.17
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.16
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.12
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	99.1
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.06
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.04
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.03
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.99
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.94
PRK10671	834	copA copper exporting ATPase; Provisional	98.94
PRK08238	479	hypothetical protein; Validated	98.92
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.91
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.87
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.84
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.8
COG4087	152	Soluble P-type ATPase [General function prediction	98.78
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.77
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.77
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.69
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.69
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.66
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.65
COG4996	164	Predicted phosphatase [General function prediction	98.64
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.64
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.63
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.41
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.39
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.39
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.38
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.36
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.36
PRK11590	211	hypothetical protein; Provisional	98.32
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	98.3
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.3
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	98.28
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.28
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.27
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.26
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.26
PLN02645	311	phosphoglycolate phosphatase	98.23
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.22
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.22
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.19
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.17
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.1
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.1
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.09
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.06
PRK15122	903	magnesium-transporting ATPase; Provisional	98.05
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.03
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.98
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.97
COG4359	220	Uncharacterized conserved protein [Function unknow	97.94
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.94
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.73
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.68
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.67
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	97.66
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.62
PRK10513	270	sugar phosphate phosphatase; Provisional	97.59
PRK10976	266	putative hydrolase; Provisional	97.58
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.53
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.52
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.52
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.51
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.47
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.46
KOG4549	144	consensus Magnesium-dependent phosphatase [General	97.43
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	97.39
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.36
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.31
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.29
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.19
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.15
PLN02887	580	hydrolase family protein	97.15
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.14
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	97.13
COG3700	237	AphA Acid phosphatase (class B) [General function	97.11
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.11
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	97.04
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.04
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	97.04
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	96.97
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	96.91
COG2503	274	Predicted secreted acid phosphatase [General funct	96.78
PLN02382	413	probable sucrose-phosphatase	96.65
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	96.64
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	96.64
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	96.45
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.38
PLN03190	1178	aminophospholipid translocase; Provisional	96.29
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.27
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	96.23
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	96.22
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	96.11
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.99
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	95.92
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.89
COG4030	315	Uncharacterized protein conserved in archaea [Func	95.86
KOG3128	298	consensus Uncharacterized conserved protein [Funct	95.29
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	95.28
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	95.15
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.14
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	95.11
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	95.05
PLN02423	245	phosphomannomutase	94.95
PRK10976	266	putative hydrolase; Provisional	94.83
COG0731	296	Fe-S oxidoreductases [Energy production and conver	94.72
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	94.68
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	94.52
KOG0206	1151	consensus P-type ATPase [General function predicti	94.4
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	94.27
PRK13762	322	tRNA-modifying enzyme; Provisional	93.98
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.79
PRK10513	270	sugar phosphate phosphatase; Provisional	93.5
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.43
PF06506	176	PrpR_N: Propionate catabolism activator; InterPro:	93.13
PTZ00174	247	phosphomannomutase; Provisional	93.0
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	92.73
TIGR02329	526	propionate_PrpR propionate catabolism operon regul	92.68
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	92.56
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	92.41
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	92.11
PRK15424	538	propionate catabolism operon regulatory protein Pr	90.93
PLN02951	373	Molybderin biosynthesis protein CNX2	90.88
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	90.34
CHL00162	267	thiG thiamin biosynthesis protein G; Validated	90.15
TIGR03470	318	HpnH hopanoid biosynthesis associated radical SAM	90.03
PF05690	247	ThiG: Thiazole biosynthesis protein ThiG; InterPro	89.66
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	89.53
COG4850	373	Uncharacterized conserved protein [Function unknow	89.25
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	88.83
TIGR02495	191	NrdG2 anaerobic ribonucleoside-triphosphate reduct	88.75
PRK11840	326	bifunctional sulfur carrier protein/thiazole synth	88.71
cd04728	248	ThiG Thiazole synthase (ThiG) is the tetrameric en	88.65
TIGR02668	302	moaA_archaeal probable molybdenum cofactor biosynt	88.46
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	88.25
COG5663	194	Uncharacterized conserved protein [Function unknow	87.7
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	87.68
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	87.49
PLN02887	580	hydrolase family protein	87.44
PLN02580	384	trehalose-phosphatase	87.3
PRK13361	329	molybdenum cofactor biosynthesis protein A; Provis	86.95
PRK10076	213	pyruvate formate lyase II activase; Provisional	86.41
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	86.21
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	86.1
PTZ00174	247	phosphomannomutase; Provisional	85.88
cd01994	194	Alpha_ANH_like_IV This is a subfamily of Adenine n	85.37
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	84.92
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	84.7
TIGR03679	218	arCOG00187 arCOG00187 universal archaeal metal-bin	84.63
PRK00208	250	thiG thiazole synthase; Reviewed	84.38
COG0761	294	lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate redu	84.1
TIGR03365	238	Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosyn	83.78
PF06014	62	DUF910: Bacterial protein of unknown function (DUF	83.03
PRK11145	246	pflA pyruvate formate lyase-activating enzyme 1; P	81.92
PLN02334	229	ribulose-phosphate 3-epimerase	81.73
COG0036	220	Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate	80.78
TIGR02826	147	RNR_activ_nrdG3 anaerobic ribonucleoside-triphosph	80.29
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	80.29

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.87  E-value=7.8e-22  Score=149.12  Aligned_cols=105  Identities=14%  Similarity=0.159  Sum_probs=96.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++++|+.+||+.+   +.+...||+|+.|..++++++++|++|+
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l  185 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAP-RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF  185 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence            3689999999999999999999999888 77789999999999999985   5566789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+..|+++|+++|+.+|++.++...+
T Consensus       186 ~vgDs~~Di~aA~~aGi~~i~v~~g~~~~  214 (248)
T PLN02770        186 VFEDSVSGIKAGVAAGMPVVGLTTRNPES  214 (248)
T ss_pred             EEcCCHHHHHHHHHCCCEEEEEeCCCCHH
Confidence            99999999999999999999999886443

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.87  E-value=1.2e-21  Score=142.93  Aligned_cols=102  Identities=20%  Similarity=0.342  Sum_probs=94.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||++ ...++..++.+|+..+|+.+   +.++..||++++|..+++++|+.|++++|
T Consensus        92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~  170 (198)
T TIGR01428        92 PPHPDVPAGLRALKERGYRLAILSNGS-PAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF  170 (198)
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            578999999999999999999999988 67778899999999999885   56677899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+..|+.+|+++|+.+|++.++..
T Consensus       171 vgD~~~Di~~A~~~G~~~i~v~r~~~  196 (198)
T TIGR01428       171 VASNPWDLGGAKKFGFKTAWVNRPGE  196 (198)
T ss_pred             EeCCHHHHHHHHHCCCcEEEecCCCC
Confidence            99999999999999999999987643

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.86  E-value=2.9e-21  Score=142.54  Aligned_cols=104  Identities=14%  Similarity=0.138  Sum_probs=95.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..||+.+   +.+...||++..|..+++++++.|++++|
T Consensus        82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~  160 (214)
T PRK13288         82 TEYETVYETLKTLKKQGYKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM  160 (214)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence            589999999999999999999999887 67778899999999999885   55567899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |||+.+|+++|+++|+.+++|.|+....
T Consensus       161 iGDs~~Di~aa~~aG~~~i~v~~g~~~~  188 (214)
T PRK13288        161 VGDNHHDILAGKNAGTKTAGVAWTIKGR  188 (214)
T ss_pred             ECCCHHHHHHHHHCCCeEEEEcCCCCCH
Confidence            9999999999999999999999986543

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.86  E-value=3.2e-21  Score=141.52  Aligned_cols=105  Identities=16%  Similarity=0.230  Sum_probs=95.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+.++|+.+   +.+..+||++.+|..++++++++|++++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l  152 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKS-GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV  152 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCc-hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence            3689999999999999999999999887 66678899999999999875   4456689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+..|+.+|+++|+.++++.||....
T Consensus       153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~  181 (205)
T TIGR01454       153 MVGDAVTDLASARAAGTATVAALWGEGDA  181 (205)
T ss_pred             EEcCCHHHHHHHHHcCCeEEEEEecCCCh
Confidence            99999999999999999999999997643

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.86  E-value=4.3e-21  Score=142.74  Aligned_cols=103  Identities=21%  Similarity=0.315  Sum_probs=95.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..+|||+.++|..|+.+|++++|+||++ ...++.+++++|+..||+.+   +.....||+|..+..++.++|++|++++
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~-~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKP-ERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            3689999999999999999999999888 67779999999999999986   3466799999999999999999988999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+++|+++|+.+++|.||+.
T Consensus       167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~  193 (220)
T COG0546         167 MVGDSLNDILAAKAAGVPAVGVTWGYN  193 (220)
T ss_pred             EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence            999999999999999999999999974

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.85  E-value=5.4e-21  Score=144.58  Aligned_cols=103  Identities=11%  Similarity=0.072  Sum_probs=93.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-ccc---eecCCCCCcHHHHHHHHHHcCCC-CCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VAK---EIFSSWSHKTDHFQRIHSRTGVP-FNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~~---~~~~~~kp~~~~~~~~~~~~~~~-~~~   76 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++++|+..|| +.+   +.+...||+|++|..+++++|+. |++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~-~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYT-REMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCc-HHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            3689999999999999999999999888 77778999999999986 653   55567899999999999999995 999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+||||+..|+++|+++|+.+|+|.+|..
T Consensus       177 ~l~IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       177 CVKVGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             eEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence            99999999999999999999999999875

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.85  E-value=6.4e-21  Score=140.98  Aligned_cols=102  Identities=20%  Similarity=0.335  Sum_probs=93.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..||+.+   +.++..||++++|..+++++|+.|++++|
T Consensus        94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  172 (221)
T TIGR02253        94 RVYPGVRDTLMELRESGYRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVM  172 (221)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            689999999999999999999999987 56668889999999999875   55677899999999999999999999999


Q ss_pred             EeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+. +|+.+|+++|+.+|++.++..
T Consensus       173 igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       173 VGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             ECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            99998 799999999999999988764

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.85  E-value=7.1e-21  Score=139.89  Aligned_cols=104  Identities=23%  Similarity=0.425  Sum_probs=95.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++++|+..+|+.+   +.+...||+|+.|..+++++|+.|++++
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  162 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKP-TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV  162 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            4689999999999999999999999887 67778999999999999875   4455689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+.+|+++|+.++++.++...
T Consensus       163 ~igDs~~d~~aa~~aG~~~i~v~~g~~~  190 (213)
T TIGR01449       163 YVGDSRVDIQAARAAGCPSVLLTYGYRY  190 (213)
T ss_pred             EeCCCHHHHHHHHHCCCeEEEEccCCCC
Confidence            9999999999999999999999987653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.85  E-value=7.8e-21  Score=142.04  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=94.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...+...++++|+..+|+.+   +..+..||+|++|..+++++|++|++|+
T Consensus        94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l  172 (229)
T PRK13226         94 SQLFDGVEGMLQRLECAGCVWGIVTNKP-EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCV  172 (229)
T ss_pred             CeeCCCHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            4689999999999999999999999887 67777889999999999875   4456789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+.+|+++|+.++++.++..
T Consensus       173 ~IGDs~~Di~aA~~aG~~~i~v~~g~~  199 (229)
T PRK13226        173 YVGDDERDILAARAAGMPSVAALWGYR  199 (229)
T ss_pred             EeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence            999999999999999999999998874

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.85  E-value=7.4e-21  Score=136.81  Aligned_cols=116  Identities=25%  Similarity=0.358  Sum_probs=99.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc---------cccccc---eecCCCCCcHHHHHHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK---------SMFVAK---EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~---------~~f~~~---~~~~~~kp~~~~~~~~~~~   69 (147)
                      ..+|||+.++|+.|+++|++++|+||+.....++..+..+++.         .+|+.+   +.....||.+..++.+.+.
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~  123 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKV  123 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhc
Confidence            3689999999999999999999999883377778899999998         899885   2323345556666666666


Q ss_pred             c--CCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHH
Q 032106           70 T--GVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFS  117 (147)
Q Consensus        70 ~--~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~  117 (147)
                      +  |+.|++|+||||+..|+++|+++|+.++++.++....++.+.+++|+
T Consensus       124 ~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~  173 (174)
T TIGR01685       124 DPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTFKKILEMWR  173 (174)
T ss_pred             ccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccHHHHHHHHHHhc
Confidence            6  79999999999999999999999999999999999999999999986

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.85  E-value=1.5e-20  Score=139.61  Aligned_cols=104  Identities=18%  Similarity=0.254  Sum_probs=95.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+++..+|+.+   +.++..||+++.|+.+++++|+.|++|+
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASP-LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCc-HHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            3689999999999999999999999887 67778899999999999885   4555689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+++|+++|+.++++.++...
T Consensus       170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~  197 (222)
T PRK10826        170 ALEDSFNGMIAAKAARMRSIVVPAPEQQ  197 (222)
T ss_pred             EEcCChhhHHHHHHcCCEEEEecCCccC
Confidence            9999999999999999999999987654

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.84  E-value=1.4e-20  Score=140.42  Aligned_cols=103  Identities=21%  Similarity=0.271  Sum_probs=93.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+..||+.+   +.++..||+|+.|..+++++|++|++|+
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAH-PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcC-HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            3689999999999999999999999887 67778889999999999875   5667799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCe-EEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVT-GILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~-~i~v~~~~~  105 (147)
                      ||||+..|+++|+++|+. +++|..+.+
T Consensus       171 ~igDs~~di~aA~~aG~~~~~~v~~~~~  198 (224)
T PRK14988        171 FIDDSEPILDAAAQFGIRYCLGVTNPDS  198 (224)
T ss_pred             EEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence            999999999999999997 577877554

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.84  E-value=1.1e-20  Score=133.34  Aligned_cols=98  Identities=26%  Similarity=0.473  Sum_probs=91.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ++++||+.++|+.|+++|++++++||+. ...++..++.+|+..+|+.+   +..+..||++.+|..+++++|+.|++++
T Consensus        76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~-~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~  154 (176)
T PF13419_consen   76 LQPYPGVRELLERLKAKGIPLVIVSNGS-RERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL  154 (176)
T ss_dssp             EEESTTHHHHHHHHHHTTSEEEEEESSE-HHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred             cchhhhhhhhhhhcccccceeEEeecCC-cccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence            4689999999999999999999999887 77778999999999999885   5567799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEE
Q 032106           79 FFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ||||+..|+.+|+++|+.+|+|
T Consensus       155 ~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  155 FVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EEESSHHHHHHHHHTTSEEEEE
T ss_pred             EEeCCHHHHHHHHHcCCeEEeC
Confidence            9999999999999999999986

...

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.84  E-value=1.7e-20  Score=142.91  Aligned_cols=98  Identities=20%  Similarity=0.300  Sum_probs=91.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++++|+..||+.+   +.+...||+|++|..+++++|+.|++|+|
T Consensus       109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~  187 (260)
T PLN03243        109 RLRPGSREFVQALKKHEIPIAVASTRP-RRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV  187 (260)
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEeCcC-HHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence            579999999999999999999999887 67778999999999999985   55566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEEC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      |||+..|+++|+++|+.++++.
T Consensus       188 IgDs~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        188 FGNSNSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             EcCCHHHHHHHHHcCCEEEEEe
Confidence            9999999999999999999996

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.84  E-value=2.5e-20  Score=136.42  Aligned_cols=108  Identities=22%  Similarity=0.347  Sum_probs=92.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh-cCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK-LNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~-~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||++ .......+.. .++..+|+.+   +.++..||+|+.|+.+++++|+.|++|+
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~-~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  162 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTN-RLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV  162 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCc-hhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence            478999999999999999999999987 4444444444 4778888875   5667799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChHHHHH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQ  111 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~  111 (147)
                      ||||+..|+.+|+++|+.++++.++....+...
T Consensus       163 ~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~  195 (199)
T PRK09456        163 FFDDNADNIEAANALGITSILVTDKQTIPDYFA  195 (199)
T ss_pred             EeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence            999999999999999999999988776654443

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.84  E-value=1.6e-20  Score=135.09  Aligned_cols=96  Identities=28%  Similarity=0.368  Sum_probs=87.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+..   .+..++.+|+..+|+.+   +..+..||+|+.|..++++++++|++++|
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~  163 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG  163 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            6899999999999999999999997653   35789999999999885   55567899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEEC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      |||+.+|+.+|+++|+.+|+|+
T Consensus       164 vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       164 IEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             EecCHHHHHHHHHcCCEEEecC
Confidence            9999999999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.84  E-value=3.3e-20  Score=137.26  Aligned_cols=105  Identities=25%  Similarity=0.273  Sum_probs=94.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc--cccccc---eecCCCCCcHHHHHHHHHHcCCC-CC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK--SMFVAK---EIFSSWSHKTDHFQRIHSRTGVP-FN   75 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~--~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~-~~   75 (147)
                      +.++||+.++|+.|+++|++++|+||+. ...++..++.+|+.  .+|+.+   +.....||+|++|..+++++++. |+
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~-~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  164 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFD-RDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQ  164 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChh
Confidence            4799999999999999999999999888 67778999999998  899885   44456899999999999999997 79


Q ss_pred             cEEEEeCCcccHHHHHHcCCeE-EEECCCCChH
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTG-ILVGNGVNLG  107 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~-i~v~~~~~~~  107 (147)
                      +|+||||+..|+++|+++|+.+ +++.++....
T Consensus       165 ~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~  197 (220)
T TIGR03351       165 SVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDA  197 (220)
T ss_pred             HeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcH
Confidence            9999999999999999999999 9998876543

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.84  E-value=3.3e-20  Score=147.29  Aligned_cols=103  Identities=13%  Similarity=0.188  Sum_probs=95.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..||+.+   +.+...||+|++|..+++++|+.|++|+|
T Consensus       216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~-~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~  294 (381)
T PLN02575        216 RLRTGSQEFVNVLMNYKIPMALVSTRP-RKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV  294 (381)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            589999999999999999999999888 77789999999999999986   55566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |||+..|+++|+++|+.+|+|.++...
T Consensus       295 IGDS~~DIeAAk~AGm~~IgV~~~~~~  321 (381)
T PLN02575        295 FGNSNQTVEAAHDARMKCVAVASKHPI  321 (381)
T ss_pred             EcCCHHHHHHHHHcCCEEEEECCCCCh
Confidence            999999999999999999999876533

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.83  E-value=5.6e-20  Score=140.21  Aligned_cols=103  Identities=13%  Similarity=0.063  Sum_probs=92.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-ccc---eecCCCCCcHHHHHHHHHHcCCC-CCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VAK---EIFSSWSHKTDHFQRIHSRTGVP-FNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~~---~~~~~~kp~~~~~~~~~~~~~~~-~~~   76 (147)
                      +.++||+.++|+.|+++|++++|+||+. ...++.+++.+++.++| +.+   +.+...||+|++|..+++++|+. +++
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~-~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e  178 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYT-REMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAA  178 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCc-HHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            4689999999999999999999999887 66778889999888875 553   45566899999999999999996 699


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+||||+.+|+++|+++|+.+|+|.+++.
T Consensus       179 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        179 CVKVDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             eEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            99999999999999999999999999875

>PLN02811 hydrolase

Probab=99.83  E-value=7e-20  Score=136.00  Aligned_cols=105  Identities=20%  Similarity=0.243  Sum_probs=89.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---e--ecCCCCCcHHHHHHHHHHcC---CC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---E--IFSSWSHKTDHFQRIHSRTG---VP   73 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~--~~~~~kp~~~~~~~~~~~~~---~~   73 (147)
                      ..++||+.++|+.|+++|++++|+||+..........+..++.++|+.+   +  .+...||+|++|..++++++   +.
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence            3679999999999999999999999887333433344445778888875   4  55678999999999999997   99


Q ss_pred             CCcEEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           74 FNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        74 ~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |++|+||||+..|+++|+++|+.+|+|.++...
T Consensus       157 ~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~  189 (220)
T PLN02811        157 PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLD  189 (220)
T ss_pred             ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCc
Confidence            999999999999999999999999999887644

>PRK11587 putative phosphatase; Provisional

Probab=99.82  E-value=9.8e-20  Score=134.99  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=89.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...+...++..++ .+|+.+   +.+...||+|+.|..+++++|+.|++|+
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~-~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l  159 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGS-VPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV  159 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCC-chHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence            3689999999999999999999999887 4555777888888 455543   4556689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+..|+++|+++|+.++++.++..
T Consensus       160 ~igDs~~di~aA~~aG~~~i~v~~~~~  186 (218)
T PRK11587        160 VVEDAPAGVLSGLAAGCHVIAVNAPAD  186 (218)
T ss_pred             EEecchhhhHHHHHCCCEEEEECCCCc
Confidence            999999999999999999999987653

>PRK06769 hypothetical protein; Validated

Probab=99.82  E-value=8.9e-20  Score=131.22  Aligned_cols=105  Identities=19%  Similarity=0.277  Sum_probs=88.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh-------HHHHHHHHhcCcccccccc----eecCCCCCcHHHHHHHHHHcC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP-------DIANTFLEKLNIKSMFVAK----EIFSSWSHKTDHFQRIHSRTG   71 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~-------~~~~~~l~~~gl~~~f~~~----~~~~~~kp~~~~~~~~~~~~~   71 (147)
                      .++||+.++|+.|+++|++++|+||+...       ......++.+|+..+|...    +.....||++.+|..++++++
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~  107 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG  107 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            57999999999999999999999987521       0123447788888877542    334568999999999999999


Q ss_pred             CCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           72 VPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        72 ~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +.|++|+||||+..|+.+|+++|+.+|++.++.+..
T Consensus       108 ~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~  143 (173)
T PRK06769        108 LDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYD  143 (173)
T ss_pred             CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCch
Confidence            999999999999999999999999999999987543

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.82  E-value=1.1e-19  Score=130.30  Aligned_cols=97  Identities=23%  Similarity=0.374  Sum_probs=87.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ... ..++.++|+..+|+.+   +.++..||++..|..+++++|++|++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  161 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL  161 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence            3689999999999999999999999887 454 5566669999999885   4567799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEE
Q 032106           79 FFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ||||+..|+.+|+++|+.+|+|
T Consensus       162 ~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       162 FVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EEcCCHHHHHHHHHcCCEEEeC
Confidence            9999999999999999999975

HAD subfamilies caused by an overly broad single model.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.82  E-value=1.3e-19  Score=134.38  Aligned_cols=100  Identities=16%  Similarity=0.213  Sum_probs=89.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCC-CcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPF-NSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~-~~~   77 (147)
                      ..++||+.++|+.|+ +|++++|+||+. ...++..++.+|+.++|+.+   +..+..||++++|..+++++|+.+ ++|
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  171 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGF-TELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV  171 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence            368999999999999 579999999987 67778899999999999986   555668999999999999999854 899


Q ss_pred             EEEeCCc-ccHHHHHHcCCeEEEECCC
Q 032106           78 LFFDDED-RNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        78 v~VgDs~-~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +||||+. .|+.+|+++|+.++++.++
T Consensus       172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~  198 (224)
T PRK09449        172 LMVGDNLHSDILGGINAGIDTCWLNAH  198 (224)
T ss_pred             EEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence            9999998 6999999999999999853

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.81  E-value=1e-19  Score=133.17  Aligned_cols=95  Identities=21%  Similarity=0.319  Sum_probs=86.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ... +..++.+|+..+|+.+   +.++..||++++|..+++++|++|++++|
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~-~~~-~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  182 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFD-SRL-RGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH  182 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCc-hhH-HHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence            579999999999999999999999886 444 7789999999999885   45667899999999999999999999999


Q ss_pred             EeCCc-ccHHHHHHcCCeEEE
Q 032106           80 FDDED-RNIDAVSKMGVTGIL   99 (147)
Q Consensus        80 VgDs~-~Di~~a~~~Gi~~i~   99 (147)
                      |||+. .|+.+|+++|+.+||
T Consensus       183 IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       183 IGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             ECCCchHHHHHHHHcCCeeeC
Confidence            99998 799999999999885

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.81  E-value=1.1e-19  Score=130.68  Aligned_cols=96  Identities=26%  Similarity=0.362  Sum_probs=87.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+   ..++.+++.+|+..||+.+   +..+..||++++|..+++++++.|++++
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS---KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            478999999999999999999999976   3357889999999999875   4455689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEE
Q 032106           79 FFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ||||+..|+++|+++|+.+++|
T Consensus       164 ~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       164 VFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             EEeCcHhhHHHHHHCCCeEeeC
Confidence            9999999999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.81  E-value=1.8e-19  Score=126.30  Aligned_cols=101  Identities=22%  Similarity=0.300  Sum_probs=84.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--------------HHHHHHHHhcCccc--ccccc----eecCCCCCcHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--------------DIANTFLEKLNIKS--MFVAK----EIFSSWSHKTDH   62 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--------------~~~~~~l~~~gl~~--~f~~~----~~~~~~kp~~~~   62 (147)
                      +++||+.++|+.|+++|++++|+||+...              ..+...++.+++..  +|...    +.....||++++
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~  106 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL  106 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence            46999999999999999999999987621              34466788899862  22221    233457999999


Q ss_pred             HHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        63 ~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      |+.+++++++++++|+||||+..|+++|+++|+.++++.+|
T Consensus       107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            99999999999999999999999999999999999999864

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.81  E-value=1.7e-19  Score=132.78  Aligned_cols=103  Identities=23%  Similarity=0.308  Sum_probs=87.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHH-HHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDI-ANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~-~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+..... ....+..+++..+|+.+   +..+..||+|.+|..+++++|+.|++|+
T Consensus        94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l  173 (211)
T TIGR02247        94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV  173 (211)
T ss_pred             ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            5799999999999999999999998763221 22334456788899885   4456689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+..|+.+|+++|+.++++.++..
T Consensus       174 ~i~D~~~di~aA~~aG~~~i~v~~~~~  200 (211)
T TIGR02247       174 FLDDLGSNLKPAAALGITTIKVSDEEQ  200 (211)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEECCHHH
Confidence            999999999999999999999987543

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.80  E-value=3.3e-19  Score=131.75  Aligned_cols=102  Identities=15%  Similarity=0.175  Sum_probs=92.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHc-CCCCCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRT-GVPFNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~-~~~~~~~   77 (147)
                      +.++||+.++|+.|+++ ++++|+||+. ...++..++.+++..+|+.+   +..+..||++.+|..+++++ |+.|+++
T Consensus        96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  173 (224)
T TIGR02254        96 HQLLPGAFELMENLQQK-FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEV  173 (224)
T ss_pred             CeeCccHHHHHHHHHhc-CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchhe
Confidence            46899999999999999 9999999988 67778899999999999986   44566899999999999999 9999999


Q ss_pred             EEEeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+. .|+.+|+++|+.++++.++..
T Consensus       174 v~igD~~~~di~~A~~~G~~~i~~~~~~~  202 (224)
T TIGR02254       174 LMIGDSLTADIKGGQNAGLDTCWMNPDMH  202 (224)
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEECCCCC
Confidence            9999998 799999999999999987643

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=2.8e-19  Score=136.94  Aligned_cols=103  Identities=21%  Similarity=0.388  Sum_probs=93.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+++..||+.+   +.++..||++.+|+.+++++|+.|++|+
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~-~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKP-ERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCc-HHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            3589999999999999999999999887 66678899999999999874   4456689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+++|+++|+.+++|.+|+.
T Consensus       179 ~IGD~~~Di~aA~~aGi~~i~v~~G~~  205 (272)
T PRK13223        179 FVGDSRSDVLAAKAAGVQCVALSYGYN  205 (272)
T ss_pred             EECCCHHHHHHHHHCCCeEEEEecCCC
Confidence            999999999999999999999998764

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.80  E-value=4.5e-19  Score=127.67  Aligned_cols=101  Identities=12%  Similarity=0.159  Sum_probs=82.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--------------HHHHHHHHhcCcccccccc--------------eecC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--------------DIANTFLEKLNIKSMFVAK--------------EIFS   54 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--------------~~~~~~l~~~gl~~~f~~~--------------~~~~   54 (147)
                      .++||+.++|+.|+++|++++|+||++..              ......+..+++.  |+.+              +...
T Consensus        26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~  103 (176)
T TIGR00213        26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCD  103 (176)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCC
Confidence            57899999999999999999999988731              1223456666554  3332              1334


Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE-EEECCCCC
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG-ILVGNGVN  105 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~-i~v~~~~~  105 (147)
                      ..||++.+|..+++++|+++++++||||+..|+++|+++|+.+ +++.++..
T Consensus       104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~  155 (176)
T TIGR00213       104 CRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKP  155 (176)
T ss_pred             CCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCc
Confidence            5899999999999999999999999999999999999999998 79988764

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.80  E-value=4.6e-19  Score=132.00  Aligned_cols=102  Identities=22%  Similarity=0.305  Sum_probs=87.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc---Ccccccccc-eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL---NIKSMFVAK-EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~---gl~~~f~~~-~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+|||+.++|+.|+++|++++|+||+. ...++.+++..   ++..||+.. +.....||+++.|..+++++|++|++++
T Consensus        95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s-~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l  173 (220)
T TIGR01691        95 HLYPDVPPALEAWLQLGLRLAVYSSGS-VPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL  173 (220)
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence            589999999999999999999999887 56666777765   565666553 2334479999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+..|+++|+++|+.++++.++.+
T Consensus       174 fVgDs~~Di~AA~~AG~~ti~v~r~g~  200 (220)
T TIGR01691       174 FLSDIINELDAARKAGLHTGQLVRPGN  200 (220)
T ss_pred             EEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence            999999999999999999999988653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PLN02940 riboflavin kinase

Probab=99.80  E-value=4.1e-19  Score=141.93  Aligned_cols=103  Identities=21%  Similarity=0.213  Sum_probs=93.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHH-hcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLE-KLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~-~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++ .+++.++|+.+   +.+...||+|++|..+++++|+.|++|
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~-~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~  170 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSP-RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC  170 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCc-HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence            3689999999999999999999999987 566677776 78999999986   556678999999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+..|+++|+++|+.++++.++..
T Consensus       171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~  198 (382)
T PLN02940        171 LVIEDSLPGVMAGKAAGMEVIAVPSIPK  198 (382)
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence            9999999999999999999999998753

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=7.9e-19  Score=129.97  Aligned_cols=103  Identities=27%  Similarity=0.400  Sum_probs=94.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      +.++||+.++|+.|++.|++++|+||+. ...++.+++.+|+..+|+.+   +.+...||++.+|..+++++++.+++++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  170 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKP-TPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML  170 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence            4689999999999999999999999887 67778899999999999874   4455689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+++|+++|+.+++|.++..
T Consensus       171 ~igD~~~Di~~a~~~g~~~i~v~~g~~  197 (226)
T PRK13222        171 FVGDSRNDIQAARAAGCPSVGVTYGYN  197 (226)
T ss_pred             EECCCHHHHHHHHHCCCcEEEECcCCC
Confidence            999999999999999999999998875

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.79  E-value=9.4e-19  Score=134.98  Aligned_cols=103  Identities=17%  Similarity=0.156  Sum_probs=88.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc---cc--eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV---AK--EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~---~~--~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||+.++|+.|+++|++++|+||+. ...+..+++.++...+|.   .+  +.+...||+|++|..+++++|+.|++|
T Consensus       144 ~l~pGv~elL~~L~~~g~~l~IvTn~~-~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~  222 (286)
T PLN02779        144 PLRPGVLRLMDEALAAGIKVAVCSTSN-EKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRC  222 (286)
T ss_pred             CchhhHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHE
Confidence            689999999999999999999999987 566677777764334443   22  455668999999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      +||||+..|+++|+++|+.+|+|.++...
T Consensus       223 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~  251 (286)
T PLN02779        223 VVVEDSVIGLQAAKAAGMRCIVTKSSYTA  251 (286)
T ss_pred             EEEeCCHHhHHHHHHcCCEEEEEccCCcc
Confidence            99999999999999999999999887653

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.79  E-value=1.3e-18  Score=133.36  Aligned_cols=104  Identities=19%  Similarity=0.394  Sum_probs=92.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      +++||+.++|+.|+++|++++|+||+. ...++..++.+|+.++|+.+.......+++..|..+++++++.|++|+||||
T Consensus       142 ~l~pg~~e~L~~L~~~gi~laIvSn~~-~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGD  220 (273)
T PRK13225        142 QLFPGVADLLAQLRSRSLCLGILSSNS-RQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGD  220 (273)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECC
Confidence            689999999999999999999999888 6777899999999999987522222346789999999999999999999999


Q ss_pred             CcccHHHHHHcCCeEEEECCCCChH
Q 032106           83 EDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +..|+.+|+++|+.+|+|.++....
T Consensus       221 s~~Di~aA~~AG~~~I~v~~g~~~~  245 (273)
T PRK13225        221 ETRDVEAARQVGLIAVAVTWGFNDR  245 (273)
T ss_pred             CHHHHHHHHHCCCeEEEEecCCCCH
Confidence            9999999999999999999987653

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.79  E-value=6e-19  Score=131.45  Aligned_cols=102  Identities=25%  Similarity=0.320  Sum_probs=94.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+.+|++++++|++. +..++..+..+|+.+||+.+   +.+...||+|+.|..+++++|+.|++||.
T Consensus        86 ~~~pGv~~~l~~L~~~~i~~avaS~s~-~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv  164 (221)
T COG0637          86 KPIPGVVELLEQLKARGIPLAVASSSP-RRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV  164 (221)
T ss_pred             CCCccHHHHHHHHHhcCCcEEEecCCh-HHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence            689999999999999999999999887 67778999999999999984   66667899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+|+..++++|+++||.++++..+..
T Consensus       165 iEDs~~Gi~Aa~aAGm~vv~v~~~~~  190 (221)
T COG0637         165 VEDSPAGIQAAKAAGMRVVGVPAGHD  190 (221)
T ss_pred             EecchhHHHHHHHCCCEEEEecCCCC
Confidence            99999999999999999999998544

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.79  E-value=8.7e-19  Score=129.86  Aligned_cols=100  Identities=21%  Similarity=0.295  Sum_probs=92.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|++.++|+.|+.. ++++|+||+. ...+...+.++||.++|+.+   +.++..||++.+|+.+++++|+.|++++|
T Consensus        99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~-~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~  176 (229)
T COG1011          99 PDYPEALEALKELGKK-YKLGILTNGA-RPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF  176 (229)
T ss_pred             ccChhHHHHHHHHHhh-ccEEEEeCCC-hHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence            6789999999999999 9999999987 66678999999999999996   67778999999999999999999999999


Q ss_pred             EeCCcc-cHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDR-NIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~-Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |||+.. |+.+|+++||.++|+.++.
T Consensus       177 VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         177 VGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             ECCChhhhhHHHHhcCcEEEEECCCC
Confidence            999988 6699999999999998765

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.79  E-value=7.8e-19  Score=125.03  Aligned_cols=99  Identities=11%  Similarity=0.162  Sum_probs=85.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC--------------ChHHHHHHHHhcCcccccccc--------eecCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP--------------SPDIANTFLEKLNIKSMFVAK--------EIFSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~--------------~~~~~~~~l~~~gl~~~f~~~--------~~~~~~kp~~   60 (147)
                      .++||+.++|+.|+++|++++|+||..              ....+..+++.+|+.  |+.+        +.....||++
T Consensus        29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~  106 (161)
T TIGR01261        29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKI  106 (161)
T ss_pred             eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCH
Confidence            478999999999999999999999863              123456788999996  6432        3445689999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .+|..++++++++|++++||||+.+|+++|+++|+.++++.++
T Consensus       107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence            9999999999999999999999999999999999999999876

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.79  E-value=1.4e-18  Score=119.34  Aligned_cols=98  Identities=20%  Similarity=0.286  Sum_probs=83.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC-------hHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHc-CCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS-------PDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRT-GVPF   74 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~-------~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~-~~~~   74 (147)
                      .++||+.++|+.|+++|++++|+||+..       ...++..++.+++..+|..... ...||++++|..+++++ +++|
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~KP~~~~~~~~~~~~~~~~~  103 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP-HCRKPKPGMFLEALKRFNEIDP  103 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCChHHHHHHHHHcCCCCh
Confidence            5789999999999999999999998761       2345778999998644333222 46899999999999999 5999


Q ss_pred             CcEEEEeC-CcccHHHHHHcCCeEEEEC
Q 032106           75 NSMLFFDD-EDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        75 ~~~v~VgD-s~~Di~~a~~~Gi~~i~v~  101 (147)
                      ++++|||| +..|+.+|+++|+.+|++.
T Consensus       104 ~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662       104 EESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             hheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            99999999 7999999999999999985

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.79  E-value=2.6e-18  Score=122.84  Aligned_cols=116  Identities=48%  Similarity=0.839  Sum_probs=92.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc----------cccccceecCCCCCcHHHHHHHHHHcC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK----------SMFVAKEIFSSWSHKTDHFQRIHSRTG   71 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~----------~~f~~~~~~~~~kp~~~~~~~~~~~~~   71 (147)
                      ..+||+++++|+.|+.+|++++++|.++.+..++.+|+.+++.          ++|+..+++..  .|...|+.+.++.|
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~~i~~~tg  121 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--SKTTHFRRIHRKTG  121 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS---HHHHHHHHHHHH-
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC--chHHHHHHHHHhcC
Confidence            3689999999999999999999999888899999999999999          89998777776  89999999999999


Q ss_pred             CCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHh
Q 032106           72 VPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQN  119 (147)
Q Consensus        72 ~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~  119 (147)
                      +++++++|++|..++++...+.|+.++.|.+|.+.+.+.++++.|+++
T Consensus       122 I~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~gL~~~~~k  169 (169)
T PF12689_consen  122 IPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFERGLEKFRKK  169 (169)
T ss_dssp             --GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHHHH-
T ss_pred             CChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence            999999999999999999999999999999999999999999999864

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.78  E-value=1e-18  Score=126.17  Aligned_cols=96  Identities=24%  Similarity=0.329  Sum_probs=87.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|+ .++|..|++. ++++|+||+. ...++..++++|+..||+.+   +.+...||+|++|..+++++++.|++|||
T Consensus        88 ~~~~~-~e~L~~L~~~-~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  164 (188)
T PRK10725         88 EPLPL-IEVVKAWHGR-RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV  164 (188)
T ss_pred             CCccH-HHHHHHHHhC-CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            56786 5899999876 8999999887 67778999999999999986   55667899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEEC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      |||+..|+++|+++|+.+|+|.
T Consensus       165 igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        165 FEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             EeccHhhHHHHHHCCCEEEeec
Confidence            9999999999999999999985

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.78  E-value=1.1e-18  Score=129.34  Aligned_cols=98  Identities=13%  Similarity=0.166  Sum_probs=88.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-c---eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-K---EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-~---~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      ..++||+.++|+.|   +++++|+||+. ...++..++.+++..+|+. +   +.++..||+|++|..+++++|+.|++|
T Consensus        87 ~~~~~gv~~~L~~L---~~~~~ivTn~~-~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~  162 (221)
T PRK10563         87 LEPIAGANALLESI---TVPMCVVSNGP-VSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC  162 (221)
T ss_pred             CCcCCCHHHHHHHc---CCCEEEEeCCc-HHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence            46899999999999   49999999887 6777889999999999963 3   456778999999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +||||+..|+++|+++|+.++++..+
T Consensus       163 l~igDs~~di~aA~~aG~~~i~~~~~  188 (221)
T PRK10563        163 ILVDDSSAGAQSGIAAGMEVFYFCAD  188 (221)
T ss_pred             EEEeCcHhhHHHHHHCCCEEEEECCC
Confidence            99999999999999999999999654

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.78  E-value=3.2e-18  Score=123.64  Aligned_cols=102  Identities=20%  Similarity=0.220  Sum_probs=84.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--------------HHHHHHHHhcCcccccccc--------eecCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--------------DIANTFLEKLNIKSMFVAK--------EIFSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--------------~~~~~~l~~~gl~~~f~~~--------~~~~~~kp~~   60 (147)
                      .++||+.++|+.|+++|++++|+||+...              ......++.+|+.  |+.+        +.+...||++
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~~KP~p  106 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDCRKPKP  106 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcCCCCCH
Confidence            47899999999999999999999987520              1223456666762  4432        2345689999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      .+|..+++++|+.|++++||||+.+|+.+|+++|+.++++.++...
T Consensus       107 ~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~  152 (181)
T PRK08942        107 GMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV  152 (181)
T ss_pred             HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence            9999999999999999999999999999999999999999887654

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.77  E-value=1.8e-18  Score=124.92  Aligned_cols=94  Identities=22%  Similarity=0.332  Sum_probs=84.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCC----CCCcHHHHHHHHHHcCCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSS----WSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~----~kp~~~~~~~~~~~~~~~~~   75 (147)
                      .++||+.++|+.|+   ++++|+||+. ...+...++.+|+..+|+.+   +..+.    +||+|++|..+++++|+.|+
T Consensus        84 ~~~~g~~~~L~~L~---~~~~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        84 KPDPELRNLLLRLP---GRKIIFTNGD-RAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCCHHHHHHHHhCC---CCEEEEeCCC-HHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            57999999999997   5799999988 67778999999999999985   33343    59999999999999999999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      +++||||+..|+++|+++|+.+++|
T Consensus       160 ~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       160 RAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             ceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            9999999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.76  E-value=1e-17  Score=120.20  Aligned_cols=99  Identities=19%  Similarity=0.241  Sum_probs=85.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|++.|++++|+||++....++.+++.+++..++      ...||++.+|..+++++++.+++++||||
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~------~~~KP~p~~~~~~l~~~~~~~~~~l~IGD  116 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP------HAVKPPGCAFRRAHPEMGLTSEQVAVVGD  116 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc------CCCCCChHHHHHHHHHcCCCHHHEEEECC
Confidence            589999999999999999999999886335556667778775332      34799999999999999999999999999


Q ss_pred             Cc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           83 ED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        83 s~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +. .|+.+|+++|+.++++.++....
T Consensus       117 s~~~Di~aA~~aGi~~i~v~~g~~~~  142 (170)
T TIGR01668       117 RLFTDVMGGNRNGSYTILVEPLVHPD  142 (170)
T ss_pred             cchHHHHHHHHcCCeEEEEccCcCCc
Confidence            98 69999999999999999987543

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.75  E-value=5.9e-18  Score=127.22  Aligned_cols=96  Identities=11%  Similarity=0.168  Sum_probs=84.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++. ++++|+||++. .     ++.+|+..||+.+   +.++..||++..|..+++++|+.|++|+
T Consensus       112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~  184 (238)
T PRK10748        112 IDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL  184 (238)
T ss_pred             CCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence            35789999999999875 99999998873 2     4779999999886   4556689999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ||||+. .|+.+|+++|+.++|+.++.
T Consensus       185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~  211 (238)
T PRK10748        185 HVGDDLTTDVAGAIRCGMQACWINPEN  211 (238)
T ss_pred             EEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence            999995 89999999999999998754

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.73  E-value=3.5e-17  Score=144.35  Aligned_cols=104  Identities=25%  Similarity=0.310  Sum_probs=94.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc-cccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK-SMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~-~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+. .||+.+   +.+...||+|++|..+++++++.|++||
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~-~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v  239 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSAD-RIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV  239 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence            479999999999999999999999887 67778899999996 788885   5666789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+..|+++|+++||.+|+|.++...+
T Consensus       240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~  268 (1057)
T PLN02919        240 VIEDALAGVQAARAAGMRCIAVTTTLSEE  268 (1057)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEECCCCCHH
Confidence            99999999999999999999999986543

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.72  E-value=7.4e-17  Score=113.49  Aligned_cols=112  Identities=21%  Similarity=0.281  Sum_probs=99.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      |..-|++++.+..++..|+++.|+||++ +.-+..+.+.+|++-      +....||.+..|+++++++++++++|+|||
T Consensus        45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~-e~RV~~~~~~l~v~f------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVG  117 (175)
T COG2179          45 PDATPELRAWLAELKEAGIKVVVVSNNK-ESRVARAAEKLGVPF------IYRAKKPFGRAFRRALKEMNLPPEEVVMVG  117 (175)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEeCCC-HHHHHhhhhhcCCce------eecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence            6788999999999999999999999987 555578889999862      456699999999999999999999999999


Q ss_pred             CCcc-cHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhh
Q 032106           82 DEDR-NIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW  120 (147)
Q Consensus        82 Ds~~-Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~  120 (147)
                      |... |+.+++++|+.+|.|..-..++.+...+.++.|..
T Consensus       118 DqL~TDVlggnr~G~~tIlV~Pl~~~d~~~t~~nR~~Er~  157 (175)
T COG2179         118 DQLFTDVLGGNRAGMRTILVEPLVAPDGWITKINRWRERR  157 (175)
T ss_pred             chhhhhhhcccccCcEEEEEEEeccccchhhhhhHHHHHH
Confidence            9977 99999999999999987666667888888888874

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.71  E-value=6.5e-17  Score=113.41  Aligned_cols=88  Identities=20%  Similarity=0.317  Sum_probs=78.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      ..+||+.++|+.|+++|++++|+||+. ...+...++.+ +..+|+.+   +.+. .||++++|..+++++|++| +|+|
T Consensus        64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~-~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~  139 (154)
T TIGR01549        64 AYIRGAADLLKRLKEAGIKLGIISNGS-LRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH  139 (154)
T ss_pred             eeccCHHHHHHHHHHCcCeEEEEeCCc-hHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence            467999999999999999999999888 67778888887 78888774   4445 8999999999999999999 9999


Q ss_pred             EeCCcccHHHHHHcC
Q 032106           80 FDDEDRNIDAVSKMG   94 (147)
Q Consensus        80 VgDs~~Di~~a~~~G   94 (147)
                      |||+..|+.+|+++|
T Consensus       140 iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       140 VGDNLNDIEGARNAG  154 (154)
T ss_pred             EeCCHHHHHHHHHcc
Confidence            999999999999987

HAD subfamilies caused by an overly broad single model.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.71  E-value=8.9e-17  Score=131.17  Aligned_cols=101  Identities=17%  Similarity=0.254  Sum_probs=88.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+..||+.+   +.+ ..||+|+.|..++++++  |++|+
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~-~~~~~~~l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l~--~~~~v  404 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGL-TEYLRAIVSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKYD--IKEAA  404 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCc-hHHHHHHHHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhcC--cceEE
Confidence            3689999999999999999999999888 67778999999999999985   222 24678889999998865  68999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+.+|+++|+.++++.++...
T Consensus       405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~~  432 (459)
T PRK06698        405 VVGDRLSDINAAKDNGLIAIGCNFDFAQ  432 (459)
T ss_pred             EEeCCHHHHHHHHHCCCeEEEEeCCCCc
Confidence            9999999999999999999999987643

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.70  E-value=7e-17  Score=115.52  Aligned_cols=96  Identities=19%  Similarity=0.297  Sum_probs=79.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCCh-----------HHHHHHHHhcCcccccccc--eecCCCCCcHHHHHHHHHHc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSP-----------DIANTFLEKLNIKSMFVAK--EIFSSWSHKTDHFQRIHSRT   70 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~-----------~~~~~~l~~~gl~~~f~~~--~~~~~~kp~~~~~~~~~~~~   70 (147)
                      +|||+.++|+.|+++|++++|+||+...           ..++.+++.+|+.. +..+  +.....||++.+|..+++++
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~~~~~~~~~  121 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGMWEYLQSQY  121 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHHHHHHHHHc
Confidence            6899999999999999999999987632           13567889999853 2221  22234799999999999999


Q ss_pred             C--CCCCcEEEEeCCc--------ccHHHHHHcCCeEEEE
Q 032106           71 G--VPFNSMLFFDDED--------RNIDAVSKMGVTGILV  100 (147)
Q Consensus        71 ~--~~~~~~v~VgDs~--------~Di~~a~~~Gi~~i~v  100 (147)
                      |  +++++++||||+.        .|+++|+++|+.+++-
T Consensus       122 ~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~~  161 (166)
T TIGR01664       122 NSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKYP  161 (166)
T ss_pred             CCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCCh
Confidence            9  9999999999996        5999999999998753

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.70  E-value=1e-16  Score=116.97  Aligned_cols=88  Identities=19%  Similarity=0.202  Sum_probs=78.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      +.+++.++|+.|++.|++++|+||+. ...++.+++.+|+..||+.+   +.... ||+|..|..+++++|+++++|+||
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~v  184 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRP-RKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMV  184 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCC-HHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEE
Confidence            34456999999999999999999887 67778999999999999875   34444 999999999999999999999999


Q ss_pred             eCCcccHHHHHHc
Q 032106           81 DDEDRNIDAVSKM   93 (147)
Q Consensus        81 gDs~~Di~~a~~~   93 (147)
                      ||+.+|+.+|+++
T Consensus       185 GD~~~Di~aA~~a  197 (197)
T TIGR01548       185 GDTVDDIITGRKA  197 (197)
T ss_pred             eCCHHHHHHHHhC
Confidence            9999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.69  E-value=1.7e-16  Score=122.65  Aligned_cols=102  Identities=17%  Similarity=0.135  Sum_probs=90.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-cccccee----------cCCCCCcHHHHHHHHHHc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MFVAKEI----------FSSWSHKTDHFQRIHSRT   70 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~~~----------~~~~kp~~~~~~~~~~~~   70 (147)
                      ..++||+.++|+.|+++|++++++||+. ....+..++.+++.+ +|+.+..          ....||++.++..+++++
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~-~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~  264 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRD-GVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK  264 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCC-hhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence            4689999999999999999999999888 666788999999987 8887522          235799999999999999


Q ss_pred             CC-CCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           71 GV-PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        71 ~~-~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +. .+++|+||||+..|+++|+++|+.+++|.||.
T Consensus       265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence            88 67999999999999999999999999998863

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.69  E-value=1.2e-16  Score=119.41  Aligned_cols=100  Identities=19%  Similarity=0.208  Sum_probs=89.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ..+++.++|+.|++.|+.++++||.. .. .+.++..+++..|||.+   +..+..||+|.+|+.+++++++.|++|+||
T Consensus       114 ~~~~~~~~lq~lR~~g~~l~iisN~d-~r-~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI  191 (237)
T KOG3085|consen  114 YLDGMQELLQKLRKKGTILGIISNFD-DR-LRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI  191 (237)
T ss_pred             eccHHHHHHHHHHhCCeEEEEecCCc-HH-HHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence            46788899999999999999999887 34 36889999999999996   677789999999999999999999999999


Q ss_pred             eCCcc-cHHHHHHcCCeEEEECCCCC
Q 032106           81 DDEDR-NIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        81 gDs~~-Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||+.. |+++|+++||.++.|.....
T Consensus       192 gD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  192 GDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             cCccccccHhHHHcCCEEEEEccccc
Confidence            99977 79999999999999986543

>PHA02597 30

Probab=99.67  E-value=4.4e-16  Score=113.54  Aligned_cols=99  Identities=20%  Similarity=0.284  Sum_probs=81.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc----ccceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF----VAKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|++. ++++++||++ .......++.+++..+|    +.+......|||++.|..+++++|  |++++
T Consensus        74 ~~~pG~~e~L~~L~~~-~~~~i~Tn~~-~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v  149 (197)
T PHA02597         74 SAYDDALDVINKLKED-YDFVAVTALG-DSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVC  149 (197)
T ss_pred             cCCCCHHHHHHHHHhc-CCEEEEeCCc-cchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEE
Confidence            5899999999999987 5688889876 34444567788887655    333333446889999999999999  89999


Q ss_pred             EEeCCcccHHHHHHc--CCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKM--GVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~--Gi~~i~v~~~~~  105 (147)
                      ||||+..|+.+|+++  ||.++++.++..
T Consensus       150 ~vgDs~~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        150 FVDDLAHNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             EeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence            999999999999999  999999998864

2 hypothetical protein; Provisional

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.67  E-value=1.1e-15  Score=120.75  Aligned_cols=110  Identities=18%  Similarity=0.295  Sum_probs=89.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC--------------ChHHHHHHHHhcCcccccccc--------eecCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP--------------SPDIANTFLEKLNIKSMFVAK--------EIFSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~--------------~~~~~~~~l~~~gl~~~f~~~--------~~~~~~kp~~   60 (147)
                      .++||+.++|..|+++|++++|+||++              ....+..+++.+++.  |+.+        +.+..+||++
T Consensus        30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p  107 (354)
T PRK05446         30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKT  107 (354)
T ss_pred             eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCH
Confidence            579999999999999999999999851              023345677888874  5432        2445689999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC-CCChHHHHHHHH
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN-GVNLGALRQGLT  114 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~-~~~~~~~~~~l~  114 (147)
                      .++..+++++++.|++++||||+.+|+.+|+++|+.++++.. +.+++...+.+.
T Consensus       108 ~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~~~~i~~~l~  162 (354)
T PRK05446        108 GLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARETLNWDAIAEQLT  162 (354)
T ss_pred             HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999954 355655554433

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.65  E-value=1.5e-15  Score=112.28  Aligned_cols=97  Identities=20%  Similarity=0.247  Sum_probs=83.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----------eec---CCCCCcHHHHHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----------EIF---SSWSHKTDHFQRIHS   68 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----------~~~---~~~kp~~~~~~~~~~   68 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|...          ...   ..++||+..|+.+++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~-~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~  162 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGF-DLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR  162 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCc-HHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence            3589999999999999999999999887 77788999999998888531          111   124679999999999


Q ss_pred             HcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           69 RTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        69 ~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +++++|++|+||||+.+|+.+|+++|+.+++
T Consensus       163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~  193 (219)
T TIGR00338       163 KEGISPENTVAVGDGANDLSMIKAAGLGIAF  193 (219)
T ss_pred             HcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence            9999999999999999999999999998643

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.64  E-value=8.9e-16  Score=105.37  Aligned_cols=88  Identities=24%  Similarity=0.368  Sum_probs=77.1

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC-------cccccccceecCCCCCcHHHHHHHHHHcC--CCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN-------IKSMFVAKEIFSSWSHKTDHFQRIHSRTG--VPF   74 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g-------l~~~f~~~~~~~~~kp~~~~~~~~~~~~~--~~~   74 (147)
                      ++||+.++|+.|+++|++++|+||++.+..+...++.++       +..+|+.+. .+..+|++..|..+++++|  +.|
T Consensus        30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~-~~~~~pkp~~~~~a~~~lg~~~~p  108 (128)
T TIGR01681        30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLT-IGYWLPKSPRLVEIALKLNGVLKP  108 (128)
T ss_pred             HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhh-hcCCCcHHHHHHHHHHHhcCCCCc
Confidence            799999999999999999999999844777788889888       788888742 2235799999999999999  999


Q ss_pred             CcEEEEeCCcccHHHHHH
Q 032106           75 NSMLFFDDEDRNIDAVSK   92 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~   92 (147)
                      ++|+||||+..|+++.++
T Consensus       109 ~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       109 KSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             ceEEEECCCHhHHHHHHh
Confidence            999999999999988765

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.63  E-value=3.5e-16  Score=111.86  Aligned_cols=83  Identities=13%  Similarity=0.262  Sum_probs=74.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+       +++|+||++ ...++..++++|+..+|+.+   +.++..||+|+.|..+++++|++|++|+|
T Consensus        90 ~~~~g~~~~L~-------~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~  161 (175)
T TIGR01493        90 PPWPDSAAALA-------RVAILSNAS-HWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM  161 (175)
T ss_pred             CCCCchHHHHH-------HHhhhhCCC-HHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence            48999999998       379999988 77778899999999999875   56677999999999999999999999999


Q ss_pred             EeCCcccHHHHHHc
Q 032106           80 FDDEDRNIDAVSKM   93 (147)
Q Consensus        80 VgDs~~Di~~a~~~   93 (147)
                      |||+.+|+.+|+++
T Consensus       162 vgD~~~Di~~A~~~  175 (175)
T TIGR01493       162 VAAHQWDLIGARKF  175 (175)
T ss_pred             EecChhhHHHHhcC
Confidence            99999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.61  E-value=6.3e-15  Score=99.54  Aligned_cols=97  Identities=26%  Similarity=0.368  Sum_probs=84.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCC----------------CCcHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSW----------------SHKTDHF   63 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~----------------kp~~~~~   63 (147)
                      .++|++.++|+.|+++|++++|+||+. ...++..++.+++..+|+.+   ......                ||++..+
T Consensus        24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          24 ELYPGVKEALKELKEKGIKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            789999999999999999999999888 77788999999987666653   111112                8999999


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        64 ~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ..++++++..+++++||||+.+|+.+++++|+.+++|
T Consensus       103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            9999999999999999999999999999999998875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.61  E-value=5.2e-15  Score=107.58  Aligned_cols=101  Identities=19%  Similarity=0.232  Sum_probs=84.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce---ecCC----------CCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE---IFSS----------WSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~---~~~~----------~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|...-   ..+.          .+++...+..++++
T Consensus        80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~-~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        80 SLRDYAEELVRWLKEKGLKTAIVSGGI-MCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            579999999999999999999999887 777899999999988775421   1111          23555789999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +++++++++||||+.+|+.+|+.+|+.++..+.+.
T Consensus       159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            99999999999999999999999999877665543

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.59  E-value=1.3e-14  Score=109.14  Aligned_cols=97  Identities=13%  Similarity=0.222  Sum_probs=78.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC---ChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP---SPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~---~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .+++++.++|+.|+++|++++++||+.   ....++.+++.+|+..+|+.+   +.....||.+.   .+++++++    
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i----  186 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI----  186 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----
Confidence            456779999999999999999999872   145678889999999999874   23333566654   35567776    


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ++||||+.+|+.+|+++|+.++.|.|+++.
T Consensus       187 ~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s  216 (237)
T TIGR01672       187 RIHYGDSDNDITAAKEAGARGIRILRASNS  216 (237)
T ss_pred             eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence            799999999999999999999999988753

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.57  E-value=1.4e-14  Score=102.43  Aligned_cols=86  Identities=16%  Similarity=0.288  Sum_probs=77.5

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      +|+.|+++|++++|+||.+ ...+...++.+|+..+|+.      .+|++..+..+++++++.+++|+||||+.+|+.++
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~-~~~~~~~l~~~gi~~~~~~------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~  108 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRK-AKLVEDRCKTLGITHLYQG------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM  108 (154)
T ss_pred             HHHHHHHCCCEEEEEECCC-CHHHHHHHHHcCCCEEEec------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            7999999999999999888 5667889999999988874      37899999999999999999999999999999999


Q ss_pred             HHcCCeEEEECCCC
Q 032106           91 SKMGVTGILVGNGV  104 (147)
Q Consensus        91 ~~~Gi~~i~v~~~~  104 (147)
                      +.+|+. +++....
T Consensus       109 ~~ag~~-~~v~~~~  121 (154)
T TIGR01670       109 EKVGLS-VAVADAH  121 (154)
T ss_pred             HHCCCe-EecCCcC
Confidence            999997 6766554

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01686 FkbH FkbH-like domain

Probab=99.56  E-value=2.7e-14  Score=111.79  Aligned_cols=91  Identities=23%  Similarity=0.334  Sum_probs=82.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh----cCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK----LNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~----~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+|||+.++|+.|+++|++++|+|+++ ...+..+++.    +++.++|+.+  ...+||++..+..+++++|+.+++++
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~-~~~a~~~l~~~~~~~~~~~~f~~~--~~~~~pk~~~i~~~~~~l~i~~~~~v  107 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKND-EDDAKKVFERRKDFILQAEDFDAR--SINWGPKSESLRKIAKKLNLGTDSFL  107 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHhCccccCcHHHeeEE--EEecCchHHHHHHHHHHhCCCcCcEE
Confidence            468999999999999999999999887 6777889999    8999999874  33478999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCe
Q 032106           79 FFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~   96 (147)
                      ||||++.|+.++++++..
T Consensus       108 fidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       108 FIDDNPAERANVKITLPV  125 (320)
T ss_pred             EECCCHHHHHHHHHHCCC
Confidence            999999999999997764

The C-terminal portion of this domain is unique to this family (by BLAST).

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.56  E-value=2.9e-14  Score=104.44  Aligned_cols=116  Identities=22%  Similarity=0.353  Sum_probs=96.1

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC---------CCCCcHHHHHHHHHHcCCC-
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS---------SWSHKTDHFQRIHSRTGVP-   73 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~---------~~kp~~~~~~~~~~~~~~~-   73 (147)
                      +-+-.+.+|-.|+.++  .++.||++ +..+.++++.+||.++|+.+-.+.         .+||.+.+|+.+.+..|+. 
T Consensus       101 PD~~LRnlLL~l~~r~--k~~FTNa~-k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~  177 (244)
T KOG3109|consen  101 PDPVLRNLLLSLKKRR--KWIFTNAY-KVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS  177 (244)
T ss_pred             CCHHHHHHHHhCcccc--EEEecCCc-HHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence            3455678888888775  79999999 777789999999999999972222         2899999999999999998 


Q ss_pred             CCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhcc
Q 032106           74 FNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNT  122 (147)
Q Consensus        74 ~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~~  122 (147)
                      |.+++||+||.++|++|++.|+.+++++..........++....+...+
T Consensus       178 p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a  226 (244)
T KOG3109|consen  178 PRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEA  226 (244)
T ss_pred             cCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhh
Confidence            9999999999999999999999999999877655566666665555443

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.56  E-value=6.5e-15  Score=113.14  Aligned_cols=103  Identities=17%  Similarity=0.113  Sum_probs=81.7

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc------eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK------EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~------~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      -|+++.++|+.|+++|+ ++|+||.+........+...++..+|..+      +.....||++.+|..+++++|+.|+++
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            48999999999998887 89999877322211223345665666553      223347999999999999999999999


Q ss_pred             EEEeCCc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           78 LFFDDED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        78 v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +||||+. .||.+|+++|+.+++|.+|....
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~  253 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRL  253 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCCH
Confidence            9999995 89999999999999999997653

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.56  E-value=2e-14  Score=103.10  Aligned_cols=84  Identities=17%  Similarity=0.241  Sum_probs=76.2

Q ss_pred             HHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q 032106           10 GILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDA   89 (147)
Q Consensus        10 ~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~   89 (147)
                      ..++.|+++|++++|+||+. ...++..++.+|+..+|+.      .||+|..|..+++++++.+++++||||+.+|+.+
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~-~~~~~~~l~~lgi~~~f~~------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~  113 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKK-SGAVRHRAEELKIKRFHEG------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSM  113 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCC-cHHHHHHHHHCCCcEEEec------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHH
Confidence            35789999999999999888 6777899999999988875      3799999999999999999999999999999999


Q ss_pred             HHHcCCeEEEE
Q 032106           90 VSKMGVTGILV  100 (147)
Q Consensus        90 a~~~Gi~~i~v  100 (147)
                      ++.+|+..+.-
T Consensus       114 ~~~ag~~~am~  124 (169)
T TIGR02726       114 MKRVGLAVAVG  124 (169)
T ss_pred             HHHCCCeEECc
Confidence            99999987655

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.55  E-value=5.7e-15  Score=103.66  Aligned_cols=91  Identities=13%  Similarity=0.069  Sum_probs=78.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc-cccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM-FVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~-f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+ .+++++|+|++. ...++.+++++++..+ |+.+   +.+...||+   |..+++++|++|++|+
T Consensus        45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~-~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i  119 (148)
T smart00577       45 KKRPGVDEFLKRAS-ELFELVVFTAGL-RMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVI  119 (148)
T ss_pred             EECCCHHHHHHHHH-hccEEEEEeCCc-HHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEE
Confidence            46899999999998 569999999888 7778899999998654 4654   555567776   9999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEE
Q 032106           79 FFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      ||||+..|+.+++++|+.+-
T Consensus       120 ~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      120 IIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             EEECCHHHhhcCccCEEEec
Confidence            99999999999999988753

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.51  E-value=1.3e-13  Score=108.04  Aligned_cols=96  Identities=18%  Similarity=0.262  Sum_probs=82.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----------e---ecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----------E---IFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----------~---~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|++.|++++|+|++. ...++.+++++|+...|...          .   .+...+||++.++.++++
T Consensus       181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~-~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~  259 (322)
T PRK11133        181 PLMPGLTELVLKLQALGWKVAIASGGF-TYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE  259 (322)
T ss_pred             CCChhHHHHHHHHHHcCCEEEEEECCc-chhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence            589999999999999999999999887 56678889999987654310          1   112368999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +|+++++|++|||+.+|+.+++.+|+.+++
T Consensus       260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~  289 (322)
T PRK11133        260 YEIPLAQTVAIGDGANDLPMIKAAGLGIAY  289 (322)
T ss_pred             cCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999998876

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.51  E-value=2e-14  Score=109.32  Aligned_cols=101  Identities=16%  Similarity=0.136  Sum_probs=84.2

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccccee------cCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEI------FSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~------~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .|+++.++++.|++.+++++|+||.. .......+..+|+..+|+.+..      ....||++.+|..++++++++|+++
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~-~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  199 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKG-RYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA  199 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCC-CCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence            47899999999999999999999877 3433445566788788875421      1126999999999999999999999


Q ss_pred             EEEeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+. +|+.+|+++|+.+++|.+|..
T Consensus       200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~  228 (257)
T TIGR01458       200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKY  228 (257)
T ss_pred             EEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence            9999996 799999999999999998853

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.50  E-value=2.6e-13  Score=102.09  Aligned_cols=98  Identities=14%  Similarity=0.208  Sum_probs=77.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCC---ChHHHHHHHHhcCc--ccccccceecC-CCCCcHHHHHHHHHHcCCCCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSP---SPDIANTFLEKLNI--KSMFVAKEIFS-SWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~---~~~~~~~~l~~~gl--~~~f~~~~~~~-~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      ..++||+.++|+.|+++|++++++||+.   ....++.+++.+|+  .++|+.+-... ..|+.+..   .++++++   
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~i---  186 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKNI---  186 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcCC---
Confidence            3688999999999999999999999853   24466777888999  78887631111 13565543   5556676   


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                       ++||||+..|+.+|+++|+.+|.|.|+++.
T Consensus       187 -~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~  216 (237)
T PRK11009        187 -RIFYGDSDNDITAAREAGARGIRILRAANS  216 (237)
T ss_pred             -eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence             899999999999999999999999998764

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.50  E-value=1.3e-13  Score=102.44  Aligned_cols=100  Identities=24%  Similarity=0.324  Sum_probs=86.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC-cccccccc-----eecCCCCCcHHHHHHHHHHcCCCC-
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN-IKSMFVAK-----EIFSSWSHKTDHFQRIHSRTGVPF-   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g-l~~~f~~~-----~~~~~~kp~~~~~~~~~~~~~~~~-   74 (147)
                      ..++||+..++++|+.+|++++++|+++ +.......+.++ +...|+.+     ..+...||+|+.|..+++.+|..| 
T Consensus        91 ~~~~PGa~kLv~~L~~~gip~alat~s~-~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~  169 (222)
T KOG2914|consen   91 SILMPGAEKLVNHLKNNGIPVALATSST-SASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPP  169 (222)
T ss_pred             cccCCcHHHHHHHHHhCCCCeeEEecCC-cccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCc
Confidence            4688999999999999999999999887 444466666665 55556553     345568999999999999999999 


Q ss_pred             CcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           75 NSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      +.|++++|++.++++|+++|+.+|++..
T Consensus       170 ~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  170 SKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             cceEEECCCHHHHHHHHhcCCeEEEecC
Confidence            9999999999999999999999999987

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.50  E-value=1.5e-13  Score=100.47  Aligned_cols=87  Identities=25%  Similarity=0.340  Sum_probs=76.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--ccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      .++|++.++|+.|++.|++++++|+.+ ...+..+.+.+|+.+  +|..  ..  .||.+.+|..+++.+++.+.+++||
T Consensus       127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~--~~--~kP~~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  127 PLRPGAKEALQELKEAGIKVAILTGDN-ESTASAIAKQLGIFDSIVFAR--VI--GKPEPKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EBHTTHHHHHHHHHHTTEEEEEEESSE-HHHHHHHHHHTTSCSEEEEES--HE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred             cchhhhhhhhhhhhccCcceeeeeccc-ccccccccccccccccccccc--cc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence            478999999999999999999999655 888899999999965  3332  11  5899999999999999999999999


Q ss_pred             eCCcccHHHHHHcC
Q 032106           81 DDEDRNIDAVSKMG   94 (147)
Q Consensus        81 gDs~~Di~~a~~~G   94 (147)
                      ||+.+|+.+++++|
T Consensus       202 GDg~nD~~al~~Ag  215 (215)
T PF00702_consen  202 GDGVNDAPALKAAG  215 (215)
T ss_dssp             ESSGGHHHHHHHSS
T ss_pred             ccCHHHHHHHHhCc
Confidence            99999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PLN02954 phosphoserine phosphatase

Probab=99.50  E-value=4.1e-13  Score=99.49  Aligned_cols=97  Identities=21%  Similarity=0.322  Sum_probs=78.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc--cccccc----e---e--------cCCCCCcHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK--SMFVAK----E---I--------FSSWSHKTDHFQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~--~~f~~~----~---~--------~~~~kp~~~~~~   64 (147)
                      +.++||+.++|+.|+++|++++|+|++. ...++.+++.+|+.  .+|...    +   .        ....++|+..+.
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~-~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~  161 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGF-RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ  161 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCc-HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence            4689999999999999999999999888 67778999999997  355320    0   0        112467899999


Q ss_pred             HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEEC
Q 032106           65 RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        65 ~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      .++++++.  ++++||||+.+|+.+|+++|+.++...
T Consensus       162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~  196 (224)
T PLN02954        162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGY  196 (224)
T ss_pred             HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEec
Confidence            99998885  689999999999999988888766543

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.47  E-value=3e-13  Score=97.21  Aligned_cols=91  Identities=16%  Similarity=0.243  Sum_probs=75.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce-----------------------ecCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE-----------------------IFSSWSHK   59 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~-----------------------~~~~~kp~   59 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+++..+|+.+.                       ......+|
T Consensus        72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        72 PIDPGFKEFIAFIKEHGIDFIVISDGN-DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCccHHHHHHHHHHcCCcEEEEeCCc-HHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            578999999999999999999999887 677788999999999987641                       11123467


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           60 TDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +..++.++.++   +.+++||||+.+|+++|+++++.+
T Consensus       151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             HHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence            88888887765   799999999999999999987653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.47  E-value=3.1e-13  Score=98.03  Aligned_cols=84  Identities=17%  Similarity=0.279  Sum_probs=74.6

Q ss_pred             HHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q 032106           10 GILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDA   89 (147)
Q Consensus        10 ~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~   89 (147)
                      ..|+.|+++|++++|+||.. ...++.+++.+|+..+|..      .++++..+..+++++|+.+++++||||+.+|+.+
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~-~~~v~~~l~~lgl~~~f~g------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~  127 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRK-SKLVEDRMTTLGITHLYQG------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPV  127 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCC-cHHHHHHHHHcCCceeecC------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHH
Confidence            47888999999999999887 5667899999999888763      4678999999999999999999999999999999


Q ss_pred             HHHcCCeEEEEC
Q 032106           90 VSKMGVTGILVG  101 (147)
Q Consensus        90 a~~~Gi~~i~v~  101 (147)
                      ++++|+.+ .+.
T Consensus       128 a~~aG~~~-~v~  138 (183)
T PRK09484        128 MEKVGLSV-AVA  138 (183)
T ss_pred             HHHCCCeE-ecC
Confidence            99999984 454

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.45  E-value=6.6e-13  Score=95.73  Aligned_cols=101  Identities=15%  Similarity=0.229  Sum_probs=80.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC--------------hHHHHHHHHhcCcccccccc--------eecCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS--------------PDIANTFLEKLNIKSMFVAK--------EIFSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~--------------~~~~~~~l~~~gl~~~f~~~--------~~~~~~kp~~   60 (147)
                      ++.||+.++|..|++.|++++|+||..-              .......++..|+.  |+.+        +.+.++||++
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~~c~cRKP~~  108 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPEDNCDCRKPKP  108 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcccCCCh
Confidence            4789999999999999999999998321              01122344455532  3332        4467799999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      .++..+++++++++++.+||||+..|+++|.++|+..+.+.++..
T Consensus       109 gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~  153 (181)
T COG0241         109 GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIG  153 (181)
T ss_pred             HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcc
Confidence            999999999999999999999999999999999999887766543

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.44  E-value=5.4e-13  Score=99.00  Aligned_cols=94  Identities=11%  Similarity=0.072  Sum_probs=74.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--cc--ccc---eecCCCCCcHHH----------HH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MF--VAK---EIFSSWSHKTDH----------FQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f--~~~---~~~~~~kp~~~~----------~~   64 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+ +..  ++  +..   +.....||.+..          ..
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~-~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~  150 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGM-DFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP  150 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCc-HHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence            3689999999999999999999999888 67778889887 643  22  111   222335565543          35


Q ss_pred             HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           65 RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        65 ~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      .++++++..+.+++||||+.+|+.+|+++|+.+
T Consensus       151 ~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~  183 (219)
T PRK09552        151 SLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF  183 (219)
T ss_pred             HHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence            788899999999999999999999999999943

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.42  E-value=3.2e-13  Score=101.76  Aligned_cols=95  Identities=13%  Similarity=0.113  Sum_probs=78.2

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-----eecCCCCCcHHHHHHHHHHcCCC-CCcEE
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-----EIFSSWSHKTDHFQRIHSRTGVP-FNSML   78 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-----~~~~~~kp~~~~~~~~~~~~~~~-~~~~v   78 (147)
                      ||++.++|+.|.++|+++ |+||.+ .......+..++...+|..+     +.....||++.+|+.++++++.. +++++
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d-~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  217 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPD-RGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML  217 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCC-EeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            789999999998899997 889887 44444556667776666643     23345899999999999999975 57999


Q ss_pred             EEeCC-cccHHHHHHcCCeEEEEC
Q 032106           79 FFDDE-DRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        79 ~VgDs-~~Di~~a~~~Gi~~i~v~  101 (147)
                      ||||+ .+|+.+|+++|+.+++|.
T Consensus       218 ~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       218 MVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EECCCcHHHHHHHHHCCCeEEEEe
Confidence            99999 589999999999999985

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.41  E-value=1.3e-12  Score=95.47  Aligned_cols=94  Identities=13%  Similarity=0.114  Sum_probs=75.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------eecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------EIFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------~~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      .++||+.++|..|+++ ++++|+||+. ...++.+++++|+..+|...       ...+..++++.....++++++..+.
T Consensus        68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~  145 (205)
T PRK13582         68 DPLPGAVEFLDWLRER-FQVVILSDTF-YEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY  145 (205)
T ss_pred             CCCCCHHHHHHHHHhc-CCEEEEeCCc-HHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence            5799999999999999 9999999888 77788999999998887542       0122223444455666677777789


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEE
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +++||||+.+|+.+++++|+.+.
T Consensus       146 ~~v~iGDs~~D~~~~~aa~~~v~  168 (205)
T PRK13582        146 RVIAAGDSYNDTTMLGEADAGIL  168 (205)
T ss_pred             eEEEEeCCHHHHHHHHhCCCCEE
Confidence            99999999999999999998653

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.38  E-value=4.2e-12  Score=92.62  Aligned_cols=99  Identities=15%  Similarity=0.202  Sum_probs=83.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-cee-------------cCCCCCcHHHHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-KEI-------------FSSWSHKTDHFQRIH   67 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-~~~-------------~~~~kp~~~~~~~~~   67 (147)
                      +.++||+.++|+.++++|++++|+|++. ...++.+++.+|+..+|.. ...             ...+++|...++.++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~-~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~  164 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASL-TILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL  164 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence            3589999999999999999999999888 6777899999999888754 110             112466788899999


Q ss_pred             HHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEEC
Q 032106           68 SRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        68 ~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      ++.++++++++++||+.+|+.+++.+|..++..+
T Consensus       165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             HHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence            9999999999999999999999999998865543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.36  E-value=1.2e-11  Score=93.61  Aligned_cols=51  Identities=20%  Similarity=0.225  Sum_probs=48.4

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      .||++.+|+.+++.+++++++++||||+. .|+.+|+++|+.+++|.+|...
T Consensus       177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~  228 (249)
T TIGR01457       177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTK  228 (249)
T ss_pred             CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCC
Confidence            69999999999999999999999999997 6999999999999999998764

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.33  E-value=3.7e-12  Score=79.48  Aligned_cols=53  Identities=23%  Similarity=0.302  Sum_probs=49.6

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHHHcCCeEEEECCCCChH
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      .+||++.+|..+++++++++++++||||+ ..||.+|+++|+.+++|.+|....
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~   55 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSP   55 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCC
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCH
Confidence            47999999999999999999999999999 889999999999999999987654

...

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.32  E-value=7.5e-12  Score=92.60  Aligned_cols=92  Identities=12%  Similarity=0.096  Sum_probs=72.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc---c---eecCCCCCcHHHH----------HHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA---K---EIFSSWSHKTDHF----------QRI   66 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~---~---~~~~~~kp~~~~~----------~~~   66 (147)
                      .++||+.++|+.|+++|++++|+|++. ...++.+++.++...+|..   .   +.+...+|.+..+          ..+
T Consensus        70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~-~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        70 EIREGFREFVAFINEHGIPFYVISGGM-DFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             cccccHHHHHHHHHHCCCeEEEECCCc-HHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            689999999999999999999999887 6777888888754444421   1   2223356665544          467


Q ss_pred             HHHcCCCCCcEEEEeCCcccHHHHHHcCC
Q 032106           67 HSRTGVPFNSMLFFDDEDRNIDAVSKMGV   95 (147)
Q Consensus        67 ~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi   95 (147)
                      +++++..+.+++||||+.+|+.+|+.+|+
T Consensus       149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            77777788999999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.31  E-value=9.3e-12  Score=102.90  Aligned_cols=90  Identities=12%  Similarity=0.195  Sum_probs=75.1

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCCh-----------HHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHH
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSP-----------DIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~-----------~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~   69 (147)
                      ++||+.+.|+.|++.|++++|+||....           ..+..+++.+|+.  |+.+   ....++||++.++..++++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~  275 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEE  275 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHh
Confidence            6899999999999999999999987631           2356788999985  6653   3334589999999999999


Q ss_pred             cC----CCCCcEEEEeCCcccHHHHHHcCC
Q 032106           70 TG----VPFNSMLFFDDEDRNIDAVSKMGV   95 (147)
Q Consensus        70 ~~----~~~~~~v~VgDs~~Di~~a~~~Gi   95 (147)
                      ++    +++++++||||+..|+.+++++|-
T Consensus       276 ~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       276 ANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             cCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            85    899999999999999888777665

Note that the EC number for the kinase function is: 2.7.1.78

>PRK10444 UMP phosphatase; Provisional

Probab=99.31  E-value=2e-11  Score=92.51  Aligned_cols=52  Identities=17%  Similarity=0.065  Sum_probs=49.0

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      .||++.+|..+++++++++++++||||+. .|+.+|+++|+.+++|.+|....
T Consensus       173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~  225 (248)
T PRK10444        173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTL  225 (248)
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCH
Confidence            69999999999999999999999999997 79999999999999999987654

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.30  E-value=3.3e-11  Score=92.38  Aligned_cols=114  Identities=12%  Similarity=0.107  Sum_probs=84.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---------eecCCCCCcH---------HHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---------EIFSSWSHKT---------DHFQ   64 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---------~~~~~~kp~~---------~~~~   64 (147)
                      .+.||+.++|+.|+++|++++|+|++. ...++.+++++|+...+..+         +..-.++|.|         ..++
T Consensus       121 ~l~pG~~efl~~L~~~GIpv~IvS~G~-~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~  199 (277)
T TIGR01544       121 MLKDGYENFFDKLQQHSIPVFIFSAGI-GNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL  199 (277)
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEeCCc-HHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence            688999999999999999999999888 78889999999986443222         1122245555         6677


Q ss_pred             HHHHHcC--CCCCcEEEEeCCcccHHHHHHc-C---CeEEEECCCCChHHHHHHHHHHHHhhc
Q 032106           65 RIHSRTG--VPFNSMLFFDDEDRNIDAVSKM-G---VTGILVGNGVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        65 ~~~~~~~--~~~~~~v~VgDs~~Di~~a~~~-G---i~~i~v~~~~~~~~~~~~l~~~~~~~~  121 (147)
                      ...+.++  ..+++|++|||+.+|+.||..+ .   +-.|++...    ..++.++.|.+...
T Consensus       200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~----~~e~~l~~y~~~~D  258 (277)
T TIGR01544       200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLND----RVDELLEKYMDSYD  258 (277)
T ss_pred             HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEeccc----CHHHHHHHHHHhCC
Confidence            7888888  8999999999999999998776 2   233444443    34445566666553

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PTZ00445 p36-lilke protein; Provisional

Probab=99.28  E-value=2.1e-11  Score=89.44  Aligned_cols=100  Identities=19%  Similarity=0.210  Sum_probs=78.7

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChH--------------HHHHHHHhcCcc----c---ccccc-------eecCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPD--------------IANTFLEKLNIK----S---MFVAK-------EIFSS   55 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--------------~~~~~l~~~gl~----~---~f~~~-------~~~~~   55 (147)
                      +-|+...++..|++.|++++|||=++...              +++..++..+-.    .   |....       ...+-
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl  155 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL  155 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence            67899999999999999999999666433              456666644322    1   11111       11233


Q ss_pred             CCCcHHH--H--HHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           56 WSHKTDH--F--QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~--~--~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .||.+..  |  +.+++++|+.|++++||+|+..++++|+++|+.++.+..+
T Consensus       156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence            7888888  8  9999999999999999999999999999999999999754

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.28  E-value=2.4e-11  Score=86.60  Aligned_cols=90  Identities=18%  Similarity=0.322  Sum_probs=74.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---e------------ecCCCCCcHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---E------------IFSSWSHKTDHFQRIH   67 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~------------~~~~~kp~~~~~~~~~   67 (147)
                      .++||+.++|+.++++|++++|+|++. ...++.+++.+|+..+|...   +            .......|...+..++
T Consensus        73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~  151 (177)
T TIGR01488        73 ALRPGARELISWLKERGIDTVIVSGGF-DFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL  151 (177)
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEECCCc-HHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence            478999999999999999999999887 67788999999998766431   0            1122456778899989


Q ss_pred             HHcCCCCCcEEEEeCCcccHHHHHHc
Q 032106           68 SRTGVPFNSMLFFDDEDRNIDAVSKM   93 (147)
Q Consensus        68 ~~~~~~~~~~v~VgDs~~Di~~a~~~   93 (147)
                      +.+++++++++||||+.+|+.+++.+
T Consensus       152 ~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       152 EESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            99999999999999999999998753

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PLN02645 phosphoglycolate phosphatase

Probab=99.24  E-value=1.5e-11  Score=95.97  Aligned_cols=100  Identities=14%  Similarity=0.034  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccccee------cCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            8 AKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEI------FSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         8 v~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~------~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      ...+...|+.++-.++|+||.+........+..+|+..+|..+..      ....||++.+|..+++++++++++++|||
T Consensus       175 l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VG  254 (311)
T PLN02645        175 IQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVG  254 (311)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEc
Confidence            344555665433458999987732211233355677667776411      11259999999999999999999999999


Q ss_pred             CCc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           82 DED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        82 Ds~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |+. .|+.+|+++|+.+++|.+|....
T Consensus       255 D~~~~Di~~A~~aG~~~ilV~~G~~~~  281 (311)
T PLN02645        255 DRLDTDILFGQNGGCKTLLVLSGVTSE  281 (311)
T ss_pred             CCcHHHHHHHHHcCCCEEEEcCCCCCH
Confidence            997 79999999999999999987643

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.24  E-value=6.2e-11  Score=93.36  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=79.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc-C-------cccccccceecCCCCC----------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL-N-------IKSMFVAKEIFSSWSH----------------   58 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~-g-------l~~~f~~~~~~~~~kp----------------   58 (147)
                      ...||+.++|+.|+++|++++|+||+. ...++.+++.+ |       +.+||+.+ +.+..||                
T Consensus       184 ~~~pgl~elL~~Lr~~G~klfLvTNS~-~~yt~~im~~l~g~~~~~~~w~~yFD~I-It~a~KP~FF~~~~pf~~v~~~~  261 (343)
T TIGR02244       184 LRDPKLPLFLSKLKEHGKKLFLLTNSD-YDYTDKGMKYLLGPFLGEHDWRDYFDVV-IVDARKPGFFTEGRPFRQVDVET  261 (343)
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhhCCcccccchHhhCcEE-EeCCCCCcccCCCCceEEEeCCC
Confidence            358999999999999999999999998 77788999996 7       88898763 1111111                


Q ss_pred             -----c-------H-----HHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHH-HcCCeEEEECCC
Q 032106           59 -----K-------T-----DHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVS-KMGVTGILVGNG  103 (147)
Q Consensus        59 -----~-------~-----~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~-~~Gi~~i~v~~~  103 (147)
                           .       .     ..+..+.+.+|+.+++++||||++. |+..++ .+||.+++|...
T Consensus       262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence                 1       1     2346777888999999999999988 999998 899999999763

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.22  E-value=1.6e-10  Score=85.14  Aligned_cols=96  Identities=8%  Similarity=0.064  Sum_probs=74.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----e--e-cC---CCCCcHHHHHHHHHHcCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----E--I-FS---SWSHKTDHFQRIHSRTGV   72 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----~--~-~~---~~kp~~~~~~~~~~~~~~   72 (147)
                      .++||+.++|+.|++.+ +++|+|++. ...++.+++.+|++.+|...    +  . .+   ..++.+..+...+++.+.
T Consensus        68 ~l~pga~ell~~lk~~~-~~~IVS~~~-~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~  145 (203)
T TIGR02137        68 KPLEGAVEFVDWLRERF-QVVILSDTF-YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  145 (203)
T ss_pred             CCCccHHHHHHHHHhCC-eEEEEeCCh-HHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence            68999999999999975 999999887 77889999999999888521    1  1 11   234444444444466553


Q ss_pred             CCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           73 PFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        73 ~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                         +++||||+.+|+.+++.+|+.+++...+
T Consensus       146 ---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~  173 (203)
T TIGR02137       146 ---RVIAAGDSYNDTTMLSEAHAGILFHAPE  173 (203)
T ss_pred             ---CEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence               7999999999999999999998888653

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.19  E-value=1.3e-10  Score=83.36  Aligned_cols=103  Identities=20%  Similarity=0.347  Sum_probs=84.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh---cCcccccccc-eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK---LNIKSMFVAK-EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~---~gl~~~f~~~-~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||++.++|++.+..|++++|.|++. ....+-+...   .+|..||+.. +.....|.....|..++...|++|.++
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGS-V~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei  180 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGS-VKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI  180 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCC-chhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence            4689999999999999999999999877 4443444433   3455566663 344457889999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +|+.|.+..+.+|+.+|+.++++.+..+
T Consensus       181 lFLSDn~~EL~AA~~vGl~t~l~~R~g~  208 (229)
T COG4229         181 LFLSDNPEELKAAAGVGLATGLAVRPGN  208 (229)
T ss_pred             EEecCCHHHHHHHHhcchheeeeecCCC
Confidence            9999999999999999999999977543

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=99.18  E-value=2.1e-10  Score=95.82  Aligned_cols=86  Identities=20%  Similarity=0.198  Sum_probs=70.2

Q ss_pred             CCCchhHHHHHHHHHHCC-CeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            2 PSLYPHAKGILHALKDKG-IDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ..++||+.++|+.|+++| ++++|+||.+ ...++.+++++|+.++|..+  .  +++|..    ++++++..+.+++||
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~-~~~a~~i~~~lgi~~~f~~~--~--p~~K~~----~v~~l~~~~~~v~~v  453 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDN-RSAAEAVAAELGIDEVHAEL--L--PEDKLA----IVKELQEEGGVVAMV  453 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCC-HHHHHHHHHHhCCCeeeccC--C--HHHHHH----HHHHHHHcCCEEEEE
Confidence            368999999999999999 9999999777 77889999999999888752  1  123444    444444466799999


Q ss_pred             eCCcccHHHHHHcCCe
Q 032106           81 DDEDRNIDAVSKMGVT   96 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~   96 (147)
                      ||+.+|+.+++++|+.
T Consensus       454 GDg~nD~~al~~A~vg  469 (556)
T TIGR01525       454 GDGINDAPALAAADVG  469 (556)
T ss_pred             ECChhHHHHHhhCCEe
Confidence            9999999999999953

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.17  E-value=2.6e-10  Score=84.59  Aligned_cols=100  Identities=17%  Similarity=0.283  Sum_probs=85.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---ee---cC-------CCCCcHHHHHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EI---FS-------SWSHKTDHFQRIHS   68 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~---~~-------~~kp~~~~~~~~~~   68 (147)
                      +.++||+.++++.++.+|++++|+|++. ...++.+.+.+|++..+...   +.   .+       ..+.|.....++++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~-~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGF-TFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCCh-HHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            6789999999999999999999999888 68889999999998766442   11   11       14668889999999


Q ss_pred             HcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           69 RTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        69 ~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      ++|+.+++++++||+.+|+.+...+|...+.-+.
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~  188 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK  188 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence            9999999999999999999999999998665544

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.17  E-value=3.9e-10  Score=84.91  Aligned_cols=91  Identities=19%  Similarity=0.179  Sum_probs=71.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHH--HHHHhcCccc-ccccceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIAN--TFLEKLNIKS-MFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~--~~l~~~gl~~-~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++++||+. +....  ..++.+|+.. +|+.+  ++...-....+..+++++++.+.+++
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~-~~~~~~~~~L~~~gl~~~~~~~I--i~s~~~~~~~l~~~~~~~~~~~~~~~   99 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSP-RNIFSLHKTLKSLGINADLPEMI--ISSGEIAVQMILESKKRFDIRNGIIY   99 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCC-CChHHHHHHHHHCCCCccccceE--EccHHHHHHHHHhhhhhccCCCceEE
Confidence            4689999999999999999999999987 44444  6789999987 88863  32211123567777788899999999


Q ss_pred             EEeCCcccHHHHHHcCC
Q 032106           79 FFDDEDRNIDAVSKMGV   95 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi   95 (147)
                      +|||+..|++....+|.
T Consensus       100 ~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459       100 LLGHLENDIINLMQCYT  116 (242)
T ss_pred             EeCCcccchhhhcCCCc
Confidence            99999999887766554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.16  E-value=2.3e-10  Score=81.74  Aligned_cols=96  Identities=21%  Similarity=0.203  Sum_probs=76.2

Q ss_pred             CCCchhHHHHHHHHHHCCCe--EEEEcCCC------ChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCC-
Q 032106            2 PSLYPHAKGILHALKDKGID--VAVASRSP------SPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGV-   72 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~--l~i~S~~~------~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~-   72 (147)
                      .++.|.+.+.+++|++.+..  ++|+||+.      ....++.+.+.+|+.-+ .    ....||  ..+..+++.++. 
T Consensus        58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-~----h~~kKP--~~~~~i~~~~~~~  130 (168)
T PF09419_consen   58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-R----HRAKKP--GCFREILKYFKCQ  130 (168)
T ss_pred             CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE-E----eCCCCC--ccHHHHHHHHhhc
Confidence            46789999999999998764  99999873      24556778888997522 1    123455  777788877764 


Q ss_pred             ----CCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCC
Q 032106           73 ----PFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        73 ----~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~  104 (147)
                          .|++++||||... |+-+|+.+|+.+|++..|.
T Consensus       131 ~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  131 KVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             cCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence                4999999999988 9999999999999998874

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.12  E-value=1e-09  Score=83.93  Aligned_cols=52  Identities=17%  Similarity=0.234  Sum_probs=49.4

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCChH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      .||.+.+|+.+++.++..+++++||||+.. ||.+|+++||.+++|..|...+
T Consensus       189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~  241 (269)
T COG0647         189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSA  241 (269)
T ss_pred             CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCCh
Confidence            799999999999999999999999999988 9999999999999999997744

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=99.10  E-value=4.5e-10  Score=93.57  Aligned_cols=85  Identities=18%  Similarity=0.243  Sum_probs=70.3

Q ss_pred             CCCchhHHHHHHHHHHCCC-eEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            2 PSLYPHAKGILHALKDKGI-DVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~-~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ..++||+.++|+.|++.|+ +++++||.+ ...++.+++++|++++|..  ..  +.+|..    ++++++...++++||
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~-~~~a~~i~~~lgi~~~f~~--~~--p~~K~~----~i~~l~~~~~~v~~v  431 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDR-RAVAERVARELGIDEVHAE--LL--PEDKLE----IVKELREKYGPVAMV  431 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCC-HHHHHHHHHHcCChhhhhc--cC--cHHHHH----HHHHHHhcCCEEEEE
Confidence            3689999999999999999 999999777 7888999999999988864  22  223433    455555566899999


Q ss_pred             eCCcccHHHHHHcCC
Q 032106           81 DDEDRNIDAVSKMGV   95 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi   95 (147)
                      ||+.+|+.+++++|+
T Consensus       432 GDg~nD~~al~~A~v  446 (536)
T TIGR01512       432 GDGINDAPALAAADV  446 (536)
T ss_pred             eCCHHHHHHHHhCCE
Confidence            999999999999996

.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.06  E-value=1.2e-09  Score=79.89  Aligned_cols=48  Identities=21%  Similarity=0.319  Sum_probs=46.0

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~  103 (147)
                      .||.+.+|+.+++.+|++|+++|||||..+ |+-.|+++||+.|.|..|
T Consensus       180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG  228 (262)
T KOG3040|consen  180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG  228 (262)
T ss_pred             cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence            799999999999999999999999999988 899999999999999765

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.04  E-value=3.3e-10  Score=80.71  Aligned_cols=110  Identities=13%  Similarity=0.110  Sum_probs=84.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-ccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .-||+.++|+.|.+. +.++|.|++. +..++.+++.++... +|+..   +.+...+++   |.+.+..+|.+++++||
T Consensus        43 ~RPgl~eFL~~l~~~-yei~I~Ts~~-~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIi  117 (162)
T TIGR02251        43 KRPHVDEFLERVSKW-YELVIFTASL-EEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVII  117 (162)
T ss_pred             ECCCHHHHHHHHHhc-CEEEEEcCCc-HHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEE
Confidence            469999999999987 9999999887 788899999999876 77664   233323444   67778889999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHh
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQN  119 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~  119 (147)
                      |||++.++.++..+|+.+....... .+.....+..|.+.
T Consensus       118 VDD~~~~~~~~~~NgI~i~~f~~~~-~D~~L~~l~~~L~~  156 (162)
T TIGR02251       118 IDNSPYSYSLQPDNAIPIKSWFGDP-NDTELLNLIPFLEG  156 (162)
T ss_pred             EeCChhhhccCccCEeecCCCCCCC-CHHHHHHHHHHHHH
Confidence            9999999999999999877765333 33223334455444

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.03  E-value=6.1e-10  Score=77.96  Aligned_cols=82  Identities=18%  Similarity=0.315  Sum_probs=73.1

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      .|+.|.+.|++++|+|+.+ ..+++..++.+|+..+|-.      .+.|...|..+++++++.++++.||||..+|+...
T Consensus        43 Gik~l~~~Gi~vAIITGr~-s~ive~Ra~~LGI~~~~qG------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm  115 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRD-SPIVEKRAKDLGIKHLYQG------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVM  115 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCC-CHHHHHHHHHcCCceeeec------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHH
Confidence            4788999999999999888 5677899999999887766      34589999999999999999999999999999999


Q ss_pred             HHcCCeEEE
Q 032106           91 SKMGVTGIL   99 (147)
Q Consensus        91 ~~~Gi~~i~   99 (147)
                      .++|+.+..
T Consensus       116 ~~vGls~a~  124 (170)
T COG1778         116 EKVGLSVAV  124 (170)
T ss_pred             HHcCCcccc
Confidence            999998653

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.99  E-value=3.3e-09  Score=88.91  Aligned_cols=85  Identities=19%  Similarity=0.253  Sum_probs=68.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      ..++||+.++|+.|++.|++++++|+.+ ...++.+++++|++ +|..  .  .+++|...++.+    ...+++++|||
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~-~~~a~~ia~~lgi~-~~~~--~--~p~~K~~~v~~l----~~~~~~v~~VG  473 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDN-RKTAKAVAKELGIN-VRAE--V--LPDDKAALIKEL----QEKGRVVAMVG  473 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCC-HHHHHHHHHHcCCc-EEcc--C--ChHHHHHHHHHH----HHcCCEEEEEe
Confidence            4689999999999999999999999777 78889999999995 4442  1  123444444444    34678999999


Q ss_pred             CCcccHHHHHHcCCe
Q 032106           82 DEDRNIDAVSKMGVT   96 (147)
Q Consensus        82 Ds~~Di~~a~~~Gi~   96 (147)
                      |+.+|+.+++++|+.
T Consensus       474 Dg~nD~~al~~A~vg  488 (562)
T TIGR01511       474 DGINDAPALAQADVG  488 (562)
T ss_pred             CCCccHHHHhhCCEE
Confidence            999999999999974

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.94  E-value=3.2e-09  Score=75.47  Aligned_cols=94  Identities=13%  Similarity=0.159  Sum_probs=65.0

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCCh-------------HHHHHHHHhcCccccccc-ceecCCCCCcHHHHHHHHHHc
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSP-------------DIANTFLEKLNIKSMFVA-KEIFSSWSHKTDHFQRIHSRT   70 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~-------------~~~~~~l~~~gl~~~f~~-~~~~~~~kp~~~~~~~~~~~~   70 (147)
                      .|+|++.|+.|++.|+.++|+||....             .-++.+++.+++.-.+-. ...-.++||.+.+++.+++++
T Consensus        31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~  110 (159)
T PF08645_consen   31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDY  110 (159)
T ss_dssp             -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCT
T ss_pred             chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhc
Confidence            468999999999999999999986321             112335556666421111 112256999999999999998


Q ss_pred             CC----CCCcEEEEeCC-----------cccHHHHHHcCCeEE
Q 032106           71 GV----PFNSMLFFDDE-----------DRNIDAVSKMGVTGI   98 (147)
Q Consensus        71 ~~----~~~~~v~VgDs-----------~~Di~~a~~~Gi~~i   98 (147)
                      +.    +.++++||||+           ..|...|.++|+++.
T Consensus       111 ~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  111 NDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             STT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             cccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            75    88999999996           568999999999864

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.94  E-value=8.2e-09  Score=90.03  Aligned_cols=87  Identities=15%  Similarity=0.172  Sum_probs=72.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      ..++||+.++|+.|++.|++++++|+.+ ...++.+++.+|+.++|..  .      .|+.-..++++++..+++++|||
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~-~~~a~~ia~~lgi~~~~~~--~------~p~~K~~~i~~l~~~~~~v~~vG  719 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDN-PTTANAIAKEAGIDEVIAG--V------LPDGKAEAIKRLQSQGRQVAMVG  719 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCCEEEeC--C------CHHHHHHHHHHHhhcCCEEEEEe
Confidence            3678999999999999999999999766 7778899999999887764  1      12233456677777788999999


Q ss_pred             CCcccHHHHHHcCCeE
Q 032106           82 DEDRNIDAVSKMGVTG   97 (147)
Q Consensus        82 Ds~~Di~~a~~~Gi~~   97 (147)
                      |+.+|+.+++.+|+..
T Consensus       720 Dg~nD~~al~~Agvgi  735 (834)
T PRK10671        720 DGINDAPALAQADVGI  735 (834)
T ss_pred             CCHHHHHHHHhCCeeE
Confidence            9999999999999943

>PRK08238 hypothetical protein; Validated

Probab=98.92  E-value=1.4e-08  Score=83.60  Aligned_cols=94  Identities=13%  Similarity=0.163  Sum_probs=72.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ++||+.+.|+.++++|++++|+|+++ ...++.+++++|+   |+.+   +.....||++.. ..+.+.++  .++++|+
T Consensus        73 ~~pga~e~L~~lk~~G~~v~LaTas~-~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~yv  145 (479)
T PRK08238         73 YNEEVLDYLRAERAAGRKLVLATASD-ERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDYA  145 (479)
T ss_pred             CChhHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeEe
Confidence            67999999999999999999999888 6778899999997   5553   333445554432 23335555  3568999


Q ss_pred             eCCcccHHHHHHcCCeEEEECCCCC
Q 032106           81 DDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||+.+|+.+++.+| ..+.|+.+..
T Consensus       146 GDS~~Dlp~~~~A~-~av~Vn~~~~  169 (479)
T PRK08238        146 GNSAADLPVWAAAR-RAIVVGASPG  169 (479)
T ss_pred             cCCHHHHHHHHhCC-CeEEECCCHH
Confidence            99999999999999 6677765443

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.91  E-value=2e-09  Score=80.94  Aligned_cols=92  Identities=11%  Similarity=-0.031  Sum_probs=62.4

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc------eecCCCCCcHHHHHHHHHHcCCCCCcE-EEEeCC
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK------EIFSSWSHKTDHFQRIHSRTGVPFNSM-LFFDDE   83 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~------~~~~~~kp~~~~~~~~~~~~~~~~~~~-v~VgDs   83 (147)
                      +...++ +|-...++||.+.......-...++...+|..+      ......||++.+|+.+++++++.+.++ +||||+
T Consensus       137 a~~~l~-~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~  215 (236)
T TIGR01460       137 AAYLLA-EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDN  215 (236)
T ss_pred             HHHHHh-CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCC
Confidence            334443 453467778755211100111234444444443      211247999999999999999999887 999999


Q ss_pred             c-ccHHHHHHcCCeEEEECCC
Q 032106           84 D-RNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        84 ~-~Di~~a~~~Gi~~i~v~~~  103 (147)
                      . .|+.+|+++|+.+++|.+|
T Consensus       216 ~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       216 LRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             cHHHHHHHHHCCCcEEEEecC
Confidence            8 7999999999999999765

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.87  E-value=8.1e-09  Score=74.81  Aligned_cols=95  Identities=18%  Similarity=0.286  Sum_probs=75.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--c------cccc---------eecCCCCCcHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--M------FVAK---------EIFSSWSHKTDHFQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~------f~~~---------~~~~~~kp~~~~~~   64 (147)
                      |++-||++++...|+++|..++++|++. ..++..+..++||+.  .      |+..         +....+-.|++.+.
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF-~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~  165 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGF-RQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIA  165 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCCh-HHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHH
Confidence            7899999999999999999999999888 788899999999975  1      2221         12222446788888


Q ss_pred             HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           65 RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        65 ~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      .+.+  +.....++||||+.+|+++..- |..+++.
T Consensus       166 ~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~  198 (227)
T KOG1615|consen  166 LLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGF  198 (227)
T ss_pred             HHHh--CCChheeEEecCCccccccCCc-hhhhhcc
Confidence            8866  7888999999999999997666 5544444

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.84  E-value=4.7e-09  Score=80.48  Aligned_cols=102  Identities=18%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc------eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK------EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~------~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      |+-...++..|++-++ ++++||.+.......-....|-..+...+      +..--.||.+.++..+.++++++|++|+
T Consensus       167 y~KL~kA~~yLqnP~c-lflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~  245 (306)
T KOG2882|consen  167 YPKLMKALNYLQNPGC-LFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTC  245 (306)
T ss_pred             HHHHHHHHHHhCCCCc-EEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEE
Confidence            5667778899987776 67899776311000011111211122222      1222289999999999999999999999


Q ss_pred             EEeCCcc-cHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDR-NIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+.+ ||..++++|++++++..|....
T Consensus       246 mvGDRL~TDIlFG~~~G~~TLLvltGv~~l  275 (306)
T KOG2882|consen  246 MVGDRLDTDILFGKNCGFKTLLVLSGVTTL  275 (306)
T ss_pred             EEcccchhhhhHhhccCcceEEEecCcCcH
Confidence            9999988 9999999999999999987643

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.80  E-value=5e-08  Score=73.31  Aligned_cols=104  Identities=18%  Similarity=0.361  Sum_probs=83.0

Q ss_pred             CCchhHHHHHHHH--HHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------e----------------ecCCCC
Q 032106            3 SLYPHAKGILHAL--KDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------E----------------IFSSWS   57 (147)
Q Consensus         3 ~~~pgv~~~L~~L--~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------~----------------~~~~~k   57 (147)
                      .+.||+.++|+.+  +..|+.+.|+|.++ .-.++.+|+..|+..+|+.+       +                .++...
T Consensus        71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaN-s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~Nm  149 (234)
T PF06888_consen   71 PIDPGMKELLRFLAKNQRGFDLIIISDAN-SFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNM  149 (234)
T ss_pred             CCCccHHHHHHHHHhcCCCceEEEEeCCc-HhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCcc
Confidence            4679999999999  45799999999888 78889999999999887553       0                001124


Q ss_pred             CcHHHHHHHHHH---cCCCCCcEEEEeCCcccHHHHHHcCC-eEEEECCCCChH
Q 032106           58 HKTDHFQRIHSR---TGVPFNSMLFFDDEDRNIDAVSKMGV-TGILVGNGVNLG  107 (147)
Q Consensus        58 p~~~~~~~~~~~---~~~~~~~~v~VgDs~~Di~~a~~~Gi-~~i~v~~~~~~~  107 (147)
                      .|...++.+++.   -|+...+++||||+.+|+.++.+++- ..++...+++..
T Consensus       150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~  203 (234)
T PF06888_consen  150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLH  203 (234)
T ss_pred             chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHH
Confidence            678888888776   47888999999999999999999876 466777777644

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.78  E-value=1.5e-07  Score=64.21  Aligned_cols=97  Identities=12%  Similarity=0.164  Sum_probs=79.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ++|+.+.+.|+.|++. +.++|+| +++...+..+++..|+..+-    .+..  .++++-..+++.++-+.+-++||||
T Consensus        30 klf~ev~e~iqeL~d~-V~i~IAS-gDr~gsl~~lae~~gi~~~r----v~a~--a~~e~K~~ii~eLkk~~~k~vmVGn  101 (152)
T COG4087          30 KLFSEVSETIQELHDM-VDIYIAS-GDRKGSLVQLAEFVGIPVER----VFAG--ADPEMKAKIIRELKKRYEKVVMVGN  101 (152)
T ss_pred             EEcHhhHHHHHHHHHh-heEEEec-CCcchHHHHHHHHcCCceee----eecc--cCHHHHHHHHHHhcCCCcEEEEecC
Confidence            6899999999999999 9999999 55577888889999976431    2222  4688888899999887799999999


Q ss_pred             CcccHHHHHHcCCeEEEECCCCChH
Q 032106           83 EDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +.+|+.+.+++.+..+-+..+..++
T Consensus       102 GaND~laLr~ADlGI~tiq~e~v~~  126 (152)
T COG4087         102 GANDILALREADLGICTIQQEGVPE  126 (152)
T ss_pred             CcchHHHhhhcccceEEeccCCcch
Confidence            9999999999999888887654443

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.77  E-value=5.8e-08  Score=69.79  Aligned_cols=84  Identities=24%  Similarity=0.427  Sum_probs=63.6

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-eecC-----------CCC--CcHHHHHHH---HH
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-EIFS-----------SWS--HKTDHFQRI---HS   68 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-~~~~-----------~~k--p~~~~~~~~---~~   68 (147)
                      |++.++|+.++++|++++|+|++. ...++.+++.+|+...+-.. +...           ...  -|...++.+   ..
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~-~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~  170 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSP-DEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE  170 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEE-HHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCc-HHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence            555599999999999999999876 78889999999998643211 1110           000  267777777   44


Q ss_pred             HcCCCCCcEEEEeCCcccHHHHH
Q 032106           69 RTGVPFNSMLFFDDEDRNIDAVS   91 (147)
Q Consensus        69 ~~~~~~~~~v~VgDs~~Di~~a~   91 (147)
                      . +..+..+++|||+.+|+.+++
T Consensus       171 ~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  171 E-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             H-THTCCEEEEEESSGGGHHHHH
T ss_pred             c-CCCCCeEEEEECCHHHHHHhC
Confidence            4 788899999999999999875

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.77  E-value=4.6e-08  Score=74.26  Aligned_cols=92  Identities=12%  Similarity=0.164  Sum_probs=67.0

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCCh----HHHHHHHHhcCccc---ccccceecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSP----DIANTFLEKLNIKS---MFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~----~~~~~~l~~~gl~~---~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      ++++.+++..++..+..+.++++....    ...+.+.+.+++..   .+..++.....-.|+..++.+++.+|++++++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~  218 (272)
T PRK10530        139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV  218 (272)
T ss_pred             eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence            456777777777777777777754322    22334445555532   12223566666678999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCe
Q 032106           78 LFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~   96 (147)
                      ++|||+.+|+.+++.+|+.
T Consensus       219 i~~GD~~NDi~m~~~ag~~  237 (272)
T PRK10530        219 VAFGDNFNDISMLEAAGLG  237 (272)
T ss_pred             EEeCCChhhHHHHHhcCce
Confidence            9999999999999999974

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.69  E-value=2.7e-07  Score=68.20  Aligned_cols=44  Identities=16%  Similarity=0.227  Sum_probs=39.9

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ..+|...+..+++++|++++++++|||+.+|+.+++.+|+.+++
T Consensus       147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam  190 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV  190 (225)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc
Confidence            56788999999999999999999999999999999999997443

catalyze the same reaction as SPP.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.69  E-value=2.2e-07  Score=80.29  Aligned_cols=86  Identities=15%  Similarity=0.169  Sum_probs=66.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      +++||+.++|+.|++.|++++++|+.+ ...++.+.+++|+..++..   .+.  .|...++.    ++ .+..++||||
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~-~~~a~~ia~~lgi~~~~~~---~p~--~K~~~v~~----l~-~~~~v~mvGD  636 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDN-PRAAAAIAGELGIDFRAGL---LPE--DKVKAVTE----LN-QHAPLAMVGD  636 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCeecCC---CHH--HHHHHHHH----Hh-cCCCEEEEEC
Confidence            578999999999999999999999666 7888999999999744431   111  24444444    33 2368999999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.+|..+++.+++...+
T Consensus       637 giNDapAl~~A~vgia~  653 (741)
T PRK11033        637 GINDAPAMKAASIGIAM  653 (741)
T ss_pred             CHHhHHHHHhCCeeEEe
Confidence            99999999999966443

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.66  E-value=1.6e-07  Score=82.49  Aligned_cols=93  Identities=13%  Similarity=0.155  Sum_probs=73.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---------------------eecCCCCCcHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---------------------EIFSSWSHKTD   61 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---------------------~~~~~~kp~~~   61 (147)
                      .+.||+.++|+.|++.|+++.++|+.+ +..+..+.+.+|+...+...                     ..+..  ..|+
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar--~~P~  604 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDS-QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR--ASPE  604 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE--CCHH
Confidence            578999999999999999999999666 88889999999997654321                     23333  4555


Q ss_pred             HHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           62 HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      .-..+.+.+....+.+.||||+.+|..+.+++++...
T Consensus       605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia  641 (884)
T TIGR01522       605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA  641 (884)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence            5566666666666889999999999999999997533

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.65  E-value=4.5e-07  Score=67.28  Aligned_cols=43  Identities=9%  Similarity=0.175  Sum_probs=38.5

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      ...|...+..+++.+|++++++++|||+.+|+.+++.+|+.++
T Consensus       155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va  197 (230)
T PRK01158        155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA  197 (230)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE
Confidence            4457888899999999999999999999999999999999754

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.64  E-value=8.1e-07  Score=60.76  Aligned_cols=88  Identities=17%  Similarity=0.209  Sum_probs=68.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCC-cHHHHHHHHHHcC------CCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSH-KTDHFQRIHSRTG------VPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp-~~~~~~~~~~~~~------~~~~   75 (147)
                      ++||.++++|+.++++|+.++.+|=+. +..+-..|+.+++..||+.+  +..+-| |-.++-++++..+      +.|+
T Consensus        41 ~L~~~v~~~l~warnsG~i~~~~sWN~-~~kA~~aLral~~~~yFhy~--ViePhP~K~~ML~~llr~i~~er~~~ikP~  117 (164)
T COG4996          41 HLFPDVKETLKWARNSGYILGLASWNF-EDKAIKALRALDLLQYFHYI--VIEPHPYKFLMLSQLLREINTERNQKIKPS  117 (164)
T ss_pred             EEcHHHHHHHHHHHhCCcEEEEeecCc-hHHHHHHHHHhchhhhEEEE--EecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence            589999999999999999999999443 66667889999999999984  222112 4456666666543      6899


Q ss_pred             cEEEEeCCcccHHHHHHc
Q 032106           76 SMLFFDDEDRNIDAVSKM   93 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~   93 (147)
                      +++|++|....+......
T Consensus       118 ~Ivy~DDR~iH~~~Iwe~  135 (164)
T COG4996         118 EIVYLDDRRIHFGNIWEY  135 (164)
T ss_pred             eEEEEecccccHHHHHHh
Confidence            999999998877766653

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.64  E-value=4e-07  Score=67.15  Aligned_cols=97  Identities=14%  Similarity=0.184  Sum_probs=73.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-----------------------------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-----------------------------------   47 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-----------------------------------   47 (147)
                      .+.|.+.++|+.|++.|++++++|+++ ...++.+++.+++..++                                   
T Consensus        18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~-~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (215)
T TIGR01487        18 MISERAIEAIRKAEKKGIPVSLVTGNT-VPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP   96 (215)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCc-chhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence            356788888999988999999999777 45556777777765321                                   


Q ss_pred             --------------------------------------c--cceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccH
Q 032106           48 --------------------------------------V--AKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNI   87 (147)
Q Consensus        48 --------------------------------------~--~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di   87 (147)
                                                            .  ..+.......|...++.+++.+|++++++++|||+.+|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~  176 (215)
T TIGR01487        97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI  176 (215)
T ss_pred             hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence                                                  0  001112245778899999999999999999999999999


Q ss_pred             HHHHHcCCeEEEE
Q 032106           88 DAVSKMGVTGILV  100 (147)
Q Consensus        88 ~~a~~~Gi~~i~v  100 (147)
                      .+++.+|+.+++-
T Consensus       177 ~ml~~ag~~vam~  189 (215)
T TIGR01487       177 DLFRVVGFKVAVA  189 (215)
T ss_pred             HHHHhCCCeEEcC
Confidence            9999999885544

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.63  E-value=2.3e-07  Score=71.05  Aligned_cols=84  Identities=15%  Similarity=0.155  Sum_probs=63.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--HHHHHHHHhcCccccc-ccceecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--DIANTFLEKLNIKSMF-VAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--~~~~~~l~~~gl~~~f-~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++++||+...  ......++.+|+..++ +.+..-...++|+..+..+.+.+++    +++
T Consensus       118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~  193 (266)
T TIGR01533       118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLL  193 (266)
T ss_pred             CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEE
Confidence            57999999999999999999999987622  2234678889997644 3321112346788888888887777    899


Q ss_pred             EeCCcccHHHH
Q 032106           80 FDDEDRNIDAV   90 (147)
Q Consensus        80 VgDs~~Di~~a   90 (147)
                      |||+..|+..+
T Consensus       194 vGD~~~Df~~~  204 (266)
T TIGR01533       194 FGDNLLDFDDF  204 (266)
T ss_pred             ECCCHHHhhhh
Confidence            99999999653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.41  E-value=2e-06  Score=73.46  Aligned_cols=88  Identities=10%  Similarity=0.084  Sum_probs=68.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+-||++++++.|++.|+++.++|+.+ ...+..+.+.+|++++|..  .  .+..|...++...+    ....+.|+||
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~-~~ta~~iA~~lGI~~v~a~--~--~PedK~~~v~~lq~----~g~~VamvGD  516 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDN-RLTAAAIAAEAGVDDFIAE--A--TPEDKIALIRQEQA----EGKLVAMTGD  516 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCEEEcC--C--CHHHHHHHHHHHHH----cCCeEEEECC
Confidence            467999999999999999999999655 8888999999999876643  1  11234444444433    3356999999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.+|..+.+.+++...+
T Consensus       517 G~NDapAL~~AdvGiAm  533 (675)
T TIGR01497       517 GTNDAPALAQADVGVAM  533 (675)
T ss_pred             CcchHHHHHhCCEeEEe
Confidence            99999999999988554

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.39  E-value=7.2e-06  Score=60.64  Aligned_cols=47  Identities=17%  Similarity=0.352  Sum_probs=41.2

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      ..-.|...++.+++.+|++++++++|||+.+|+.+.+.+|.. +.+..
T Consensus       183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~n  229 (254)
T PF08282_consen  183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGN  229 (254)
T ss_dssp             TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETT
T ss_pred             CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcC
Confidence            367788999999999999999999999999999999999887 44433

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.39  E-value=2.6e-06  Score=72.76  Aligned_cols=88  Identities=10%  Similarity=0.117  Sum_probs=70.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+-||++++++.|++.|+++.++|+- ++..+..+.+++|++++|..        -.|+-=..+.+.+.-.-.-+.|+||
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGI~~v~A~--------~~PedK~~iV~~lQ~~G~~VaMtGD  511 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGD-NELTAATIAKEAGVDRFVAE--------CKPEDKINVIREEQAKGHIVAMTGD  511 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCceEEcC--------CCHHHHHHHHHHHHhCCCEEEEECC
Confidence            46799999999999999999999954 48999999999999876654        2444444555555444466999999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.||..+-+++.+...+
T Consensus       512 GvNDAPALa~ADVGIAM  528 (673)
T PRK14010        512 GTNDAPALAEANVGLAM  528 (673)
T ss_pred             ChhhHHHHHhCCEEEEe
Confidence            99999999999987443

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.38  E-value=2.9e-06  Score=72.56  Aligned_cols=88  Identities=11%  Similarity=0.155  Sum_probs=69.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+-||++++++.|++.|+++.++|+- ++..++.+.+.+|++++|..        -.|+--..+.+.+.-...-+.|+||
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGId~v~A~--------~~PedK~~iV~~lQ~~G~~VaMtGD  515 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGD-NPLTAAAIAAEAGVDDFLAE--------ATPEDKLALIRQEQAEGRLVAMTGD  515 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCcEEEcc--------CCHHHHHHHHHHHHHcCCeEEEECC
Confidence            46799999999999999999999954 48999999999999876543        1344334444444434456999999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.||..+-+++++...+
T Consensus       516 GvNDAPALa~ADVGIAM  532 (679)
T PRK01122        516 GTNDAPALAQADVGVAM  532 (679)
T ss_pred             CcchHHHHHhCCEeEEe
Confidence            99999999999987544

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.36  E-value=7.1e-07  Score=70.06  Aligned_cols=50  Identities=20%  Similarity=0.288  Sum_probs=43.7

Q ss_pred             CCCCcHHHHHHHHHHc--------CC-----CCCcEEEEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           55 SWSHKTDHFQRIHSRT--------GV-----PFNSMLFFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~--------~~-----~~~~~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ..||++.+|+.+++.+        +.     ++++++||||++ .||.+|+++||.+++|.+|.
T Consensus       231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~  294 (321)
T TIGR01456       231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGV  294 (321)
T ss_pred             cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccc
Confidence            3899999999988877        43     457999999998 69999999999999998873

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.36  E-value=2.7e-06  Score=72.96  Aligned_cols=85  Identities=20%  Similarity=0.268  Sum_probs=66.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ++-|++.++++.|++.|+++.++| ++++..++.+.+++|+++++-.  ..  +..|.+.++.+.    -....+.||||
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLT-GDn~~~A~~iA~~lGId~v~Ae--ll--PedK~~~V~~l~----~~g~~VamVGD  607 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLT-GDNRRTAEAIAKELGIDEVRAE--LL--PEDKAEIVRELQ----AEGRKVAMVGD  607 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEc-CCCHHHHHHHHHHcChHhhecc--CC--cHHHHHHHHHHH----hcCCEEEEEeC
Confidence            467999999999999999999999 4558889999999999877654  21  113444444443    33377999999


Q ss_pred             CcccHHHHHHcCCe
Q 032106           83 EDRNIDAVSKMGVT   96 (147)
Q Consensus        83 s~~Di~~a~~~Gi~   96 (147)
                      +.||-.+-..+.+.
T Consensus       608 GINDAPALA~AdVG  621 (713)
T COG2217         608 GINDAPALAAADVG  621 (713)
T ss_pred             CchhHHHHhhcCee
Confidence            99999988888776

>PRK11590 hypothetical protein; Provisional

Probab=98.32  E-value=1.3e-05  Score=59.13  Aligned_cols=94  Identities=11%  Similarity=0.149  Sum_probs=64.7

Q ss_pred             CCchhHHHHH-HHHHHCCCeEEEEcCCCChHHHHHHHHhcCc---ccccccc-e-ecC-----C-CCCcHHHHHHHHHHc
Q 032106            3 SLYPHAKGIL-HALKDKGIDVAVASRSPSPDIANTFLEKLNI---KSMFVAK-E-IFS-----S-WSHKTDHFQRIHSRT   70 (147)
Q Consensus         3 ~~~pgv~~~L-~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl---~~~f~~~-~-~~~-----~-~kp~~~~~~~~~~~~   70 (147)
                      .++||+.+.| +.|++.|++++|+||+. ...++.+++.+|+   .+.+-.. + .++     . +... +=...+.+.+
T Consensus        95 ~~~pga~e~L~~~l~~~G~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~-~K~~~l~~~~  172 (211)
T PRK11590         95 TAFPVVQERLTTYLLSSDADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGH-EKVAQLERKI  172 (211)
T ss_pred             cCCccHHHHHHHHHHhCCCEEEEEeCCc-HHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCCh-HHHHHHHHHh
Confidence            4699999999 67888999999999888 6777889999885   3322110 1 111     1 1111 1112333344


Q ss_pred             CCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           71 GVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        71 ~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +.+...+.+-|||.+|+.+...+|-..+
T Consensus       173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~~~  200 (211)
T PRK11590        173 GTPLRLYSGYSDSKQDNPLLYFCQHRWR  200 (211)
T ss_pred             CCCcceEEEecCCcccHHHHHhCCCCEE
Confidence            6677888999999999999999888743

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=98.30  E-value=6.1e-06  Score=61.38  Aligned_cols=104  Identities=15%  Similarity=0.227  Sum_probs=81.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC---cccccccc-eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN---IKSMFVAK-EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g---l~~~f~~~-~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..|+++..+++.++..|++++|.|++. ....+.+....+   +..|++.- +..-..|-....|..|.+..|.++.+++
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgs-v~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~eiL  201 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGS-VAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREIL  201 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCc-HHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhheE
Confidence            579999999999999999999999776 555444444332   22232221 1233467888999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |.-|...-..+|+.+|+.+..+.++.+..
T Consensus       202 fLTd~~~Ea~aa~~aGl~a~l~~rPgna~  230 (254)
T KOG2630|consen  202 FLTDVPREAAAARKAGLQAGLVSRPGNAP  230 (254)
T ss_pred             EeccChHHHHHHHhcccceeeeecCCCCC
Confidence            99999999999999999999998876644

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.30  E-value=9.3e-06  Score=61.94  Aligned_cols=43  Identities=14%  Similarity=0.218  Sum_probs=38.1

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      .-.|...++.+++.+|+++++++.|||+.||+.+-+.+|..++
T Consensus       186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vA  228 (272)
T PRK15126        186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFI  228 (272)
T ss_pred             CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCcee
Confidence            4567788889999999999999999999999999999998543

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=98.28  E-value=1.2e-05  Score=60.92  Aligned_cols=45  Identities=18%  Similarity=0.286  Sum_probs=39.2

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      .-.|....+.+++++|+.+++++.|||+.+|+.+-+.+|..+++-
T Consensus       187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~  231 (264)
T COG0561         187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG  231 (264)
T ss_pred             CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc
Confidence            456777889999999999999999999999999999998875543

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.28  E-value=1.4e-05  Score=60.39  Aligned_cols=49  Identities=18%  Similarity=0.302  Sum_probs=41.9

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +.....-.|...++.+++.++++++++++|||+.+|+.+++.+|+.+++
T Consensus       181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~  229 (256)
T TIGR00099       181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM  229 (256)
T ss_pred             EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence            3444456788889999999999999999999999999999999987554

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.27  E-value=4.1e-06  Score=62.04  Aligned_cols=103  Identities=15%  Similarity=0.272  Sum_probs=76.9

Q ss_pred             CCchhHHHHHHHHHHCCC-eEEEEcCCCChHHHHHHHHhcCcccccccc-------ee-----------------cCCCC
Q 032106            3 SLYPHAKGILHALKDKGI-DVAVASRSPSPDIANTFLEKLNIKSMFVAK-------EI-----------------FSSWS   57 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~-~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------~~-----------------~~~~k   57 (147)
                      .+.||+.++++.+++.|. .+.|+|.+| .-.++..++.+|+.++|..+       +.                 ++...
T Consensus        84 P~~Pgmv~lik~~ak~g~~eliIVSDaN-sfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm  162 (256)
T KOG3120|consen   84 PIVPGMVRLIKSAAKLGCFELIIVSDAN-SFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM  162 (256)
T ss_pred             CCCccHHHHHHHHHhCCCceEEEEecCc-hhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence            367999999999999985 999999888 67789999999999988764       00                 01123


Q ss_pred             CcHHHHHHHHH---HcCCCCCcEEEEeCCcccHHHHHHcCC-eEEEECCCCCh
Q 032106           58 HKTDHFQRIHS---RTGVPFNSMLFFDDEDRNIDAVSKMGV-TGILVGNGVNL  106 (147)
Q Consensus        58 p~~~~~~~~~~---~~~~~~~~~v~VgDs~~Di~~a~~~Gi-~~i~v~~~~~~  106 (147)
                      .|...+.++..   +-|+..++++||||+.+|+.+.....- .+++...|++.
T Consensus       163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl  215 (256)
T KOG3120|consen  163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL  215 (256)
T ss_pred             hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence            34445555444   347888999999999999998888744 55555566653

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.26  E-value=1.1e-05  Score=71.38  Aligned_cols=92  Identities=15%  Similarity=0.187  Sum_probs=69.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--------ccccc-----------------eecCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--------MFVAK-----------------EIFSSWS   57 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--------~f~~~-----------------~~~~~~k   57 (147)
                      .+.|++.++|+.|++.|+++.++|+.+ ...+..+.+.+|+..        .++..                 ..+..  
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar--  613 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDN-KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR--  613 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCC-HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe--
Confidence            578999999999999999999999555 788889999999864        22210                 12222  


Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      ..|+.-..+++.++-..+.+.|+||+.+|+.+.+.+++..
T Consensus       614 ~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGi  653 (917)
T TIGR01116       614 VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGI  653 (917)
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeE
Confidence            2333335555666656678999999999999999999954

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.26  E-value=5.2e-06  Score=64.21  Aligned_cols=79  Identities=18%  Similarity=0.142  Sum_probs=59.5

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCc-----------------------
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHK-----------------------   59 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~-----------------------   59 (147)
                      ||+.++|+.|+++|++++|+|++. +..+...++.+|+..||+.+   ......||+                       
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~-Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~  227 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGD-RDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTD  227 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCC
Confidence            999999999999999999999888 66668899999999999764   222223333                       


Q ss_pred             -------HHHHHHHHHHcCCCC-CcEEEEeCCcc
Q 032106           60 -------TDHFQRIHSRTGVPF-NSMLFFDDEDR   85 (147)
Q Consensus        60 -------~~~~~~~~~~~~~~~-~~~v~VgDs~~   85 (147)
                             |....+.+++.|+.. ..+-.|+|-..
T Consensus       228 ~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~  261 (301)
T TIGR01684       228 GKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLAD  261 (301)
T ss_pred             CCcCCCCCeehHHHHHHcCCceeeeEEEeccCcc
Confidence                   345566667777765 66667777654

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PLN02645 phosphoglycolate phosphatase

Probab=98.23  E-value=1.2e-05  Score=62.89  Aligned_cols=91  Identities=14%  Similarity=0.156  Sum_probs=65.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHH--HHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDI--ANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~--~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      .++||+.++|+.|+++|++++++||+.....  .-..++.+|+...++.  ++..    .......++..+......+||
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~--I~ts----~~~~~~~l~~~~~~~~~~V~v  117 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE--IFSS----SFAAAAYLKSINFPKDKKVYV  117 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh--Eeeh----HHHHHHHHHhhccCCCCEEEE
Confidence            5789999999999999999999998773322  1223567888644443  3332    335555556556544556888


Q ss_pred             eCCcccHHHHHHcCCeEEE
Q 032106           81 DDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~   99 (147)
                      +++..+.+.++.+|+.++.
T Consensus       118 iG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        118 IGEEGILEELELAGFQYLG  136 (311)
T ss_pred             EcCHHHHHHHHHCCCEEec
Confidence            8898899999999997654

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.22  E-value=1e-05  Score=66.17  Aligned_cols=100  Identities=18%  Similarity=0.240  Sum_probs=66.4

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc---------CcccccccceecC--------------------C
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL---------NIKSMFVAKEIFS--------------------S   55 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~--------------------~   55 (147)
                      -|.++.+|+.|+++|.+++++||++ -..++.++..+         ++.+|||.+-..+                    .
T Consensus       185 ~~~l~~~L~~lr~~GKklFLiTNS~-~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~  263 (448)
T PF05761_consen  185 DPKLPPWLERLRSAGKKLFLITNSP-FDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK  263 (448)
T ss_dssp             -CHHHHHHHHHHCCT-EEEEE-SS--HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred             CchHHHHHHHHHhcCceEEEecCCC-CchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence            3688999999999999999999988 77778877753         3556787641000                    0


Q ss_pred             ---C------CC----cHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHc-CCeEEEECCCCC
Q 032106           56 ---W------SH----KTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKM-GVTGILVGNGVN  105 (147)
Q Consensus        56 ---~------kp----~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~-Gi~~i~v~~~~~  105 (147)
                         .      ++    .......+.+-+|....+++||||+.. ||..+++. ||+|++|-....
T Consensus       264 l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe  328 (448)
T PF05761_consen  264 LKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE  328 (448)
T ss_dssp             EECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred             cccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence               0      00    112446677778998999999999988 98888776 999999976543

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.22  E-value=8.1e-06  Score=60.32  Aligned_cols=65  Identities=12%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             HHHHHHHHhcCcc----cccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           32 DIANTFLEKLNIK----SMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        32 ~~~~~~l~~~gl~----~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      ..+...+...++.    .+|.  +..+..-.|...+..+++.+|++++++++|||+.+|+.+.+.+|..++
T Consensus       151 ~~~~~~l~~~~~~~~~~~~~~--ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va  219 (221)
T TIGR02463       151 PRFTALLADLGLAIVQGNRFS--HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV  219 (221)
T ss_pred             HHHHHHHHHcCCeEEecCCee--EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence            3344556666664    3332  455555668889999999999999999999999999999999998754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.19  E-value=3.6e-05  Score=57.01  Aligned_cols=94  Identities=12%  Similarity=0.120  Sum_probs=63.1

Q ss_pred             CCchhHHHHHH-HHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----ee-c-CC-----CCCcHHHHHHHHHHc
Q 032106            3 SLYPHAKGILH-ALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----EI-F-SS-----WSHKTDHFQRIHSRT   70 (147)
Q Consensus         3 ~~~pgv~~~L~-~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----~~-~-~~-----~kp~~~~~~~~~~~~   70 (147)
                      .++||+.++|+ +++++|++++|+||+. ...++.+++..++..-.+.+    +. . +.     +... +=...+.+.+
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~-~Kv~rl~~~~  171 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSP-QPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGH-EKVAQLEQKI  171 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCc-HHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCCh-HHHHHHHHHh
Confidence            47999999995 8898999999999888 67778888775552211111    11 1 10     1111 1112233334


Q ss_pred             CCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           71 GVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        71 ~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +.+...+.+-|||.+|+.+...+|-..+
T Consensus       172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~~  199 (210)
T TIGR01545       172 GSPLKLYSGYSDSKQDNPLLAFCEHRWR  199 (210)
T ss_pred             CCChhheEEecCCcccHHHHHhCCCcEE
Confidence            5566778999999999999999988743

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.17  E-value=1.1e-05  Score=61.73  Aligned_cols=65  Identities=11%  Similarity=0.193  Sum_probs=50.8

Q ss_pred             HHHHHHhcCcc----cccccceecCCCCCcHHHHHHHHHHcCCCC-CcEEEEeCCcccHHHHHHcCCeEEEEC
Q 032106           34 ANTFLEKLNIK----SMFVAKEIFSSWSHKTDHFQRIHSRTGVPF-NSMLFFDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        34 ~~~~l~~~gl~----~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~v~VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      +...++..++.    .+|.  +..+.. .|...++++++.+|+++ +++++|||+.+|+.+++.+|+.+++-.
T Consensus       165 ~~~~l~~~~~~~~~~~~~~--ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~N  234 (273)
T PRK00192        165 FEEALKRLGLKVTRGGRFL--HLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPG  234 (273)
T ss_pred             HHHHHHHcCCEEEECCeEE--EEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCC
Confidence            34445555554    2222  466666 88999999999999999 999999999999999999998866554

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.10  E-value=2.7e-05  Score=67.68  Aligned_cols=94  Identities=15%  Similarity=0.118  Sum_probs=69.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc-ccc-----------------------ceecCCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM-FVA-----------------------KEIFSSWSH   58 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~-f~~-----------------------~~~~~~~kp   58 (147)
                      .+.|+++++++.|++.|+++.++|+-+ +..+..+.+++|+.+. +..                       ...+..  -
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~-~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr--~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDH-LAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE--V  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe--c
Confidence            577999999999999999999999555 8889999999999641 100                       012222  2


Q ss_pred             cHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           59 KTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      .|+-=..+.+.+.-...-+.|+||+.||..+-+.+.+...+
T Consensus       519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm  559 (755)
T TIGR01647       519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV  559 (755)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence            33334444455544557799999999999999999988443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.10  E-value=2.7e-05  Score=68.56  Aligned_cols=94  Identities=18%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--cccc-----------------ceecCCCCCcHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MFVA-----------------KEIFSSWSHKTDHF   63 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f~~-----------------~~~~~~~kp~~~~~   63 (147)
                      .+.|+++++++.|++.|+++.++|+- ++..+..+.+++|+..  ....                 ...+..  -.|+-=
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr--~~Pe~K  591 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFAR--LTPMQK  591 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEE--CCHHHH
Confidence            46799999999999999999999954 4888899999999962  1100                 022222  233333


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        64 ~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ..+.+.+.-.-..+.|+||+.||..+.+.+++...+
T Consensus       592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm  627 (867)
T TIGR01524       592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV  627 (867)
T ss_pred             HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe
Confidence            333343333346799999999999999999998554

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.09  E-value=2.5e-05  Score=51.35  Aligned_cols=85  Identities=19%  Similarity=0.180  Sum_probs=52.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      +++||+.++|+.|+++|++++++||+....  .....++.+|+.  ++..+.+..    .......+++. .....++++
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~--~~~~~i~ts----~~~~~~~l~~~-~~~~~v~vl   86 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP--VDEDEIITS----GMAAAEYLKEH-KGGKKVYVL   86 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEH----HHHHHHHHHHH-TTSSEEEEE
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC--CCcCEEECh----HHHHHHHHHhc-CCCCEEEEE
Confidence            579999999999999999999999886433  334456888887  333234333    33334444442 234778888


Q ss_pred             eCCcccHHHHHHcCC
Q 032106           81 DDEDRNIDAVSKMGV   95 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi   95 (147)
                      |-. ...+..+.+|+
T Consensus        87 G~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   87 GSD-GLREELREAGF  100 (101)
T ss_dssp             S-H-HHHHHHHHTTE
T ss_pred             cCH-HHHHHHHHcCC
Confidence            865 44555666664

...

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.06  E-value=3e-05  Score=68.53  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=68.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--ccc--------c---------ceecCCCCCcHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MFV--------A---------KEIFSSWSHKTDHF   63 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f~--------~---------~~~~~~~kp~~~~~   63 (147)
                      .+-|++.++++.|++.|+++.++| ++++..+..+.+++|+..  .+.        .         ...+..  -.|+.=
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miT-GD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr--~sPe~K  626 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILT-GDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFAR--LTPMHK  626 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEE--cCHHHH
Confidence            467999999999999999999999 444888999999999962  110        0         022222  234444


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        64 ~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ..+.+.+.-...-+.|+||+.||..+-+++.+...+
T Consensus       627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm  662 (902)
T PRK10517        627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV  662 (902)
T ss_pred             HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe
Confidence            445554444456799999999999999999987544

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.05  E-value=3.1e-05  Score=68.49  Aligned_cols=97  Identities=15%  Similarity=0.233  Sum_probs=69.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--cccc-----------------ceecCCCCCcHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MFVA-----------------KEIFSSWSHKTDHF   63 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f~~-----------------~~~~~~~kp~~~~~   63 (147)
                      .+.|+++++++.|++.|+++.++| ++++..+..+.+.+|+..  ....                 ...+..  -.|+.=
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miT-GD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr--~sPe~K  626 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLT-GDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAK--LTPLQK  626 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEEC-CCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEE--eCHHHH
Confidence            467999999999999999999999 444888999999999962  0000                 012222  234444


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        64 ~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      ..+.+.+.-.-+-+.|+||+.||..+-+++.+.. .++.|
T Consensus       627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGI-Amg~g  665 (903)
T PRK15122        627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGI-SVDSG  665 (903)
T ss_pred             HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEE-EeCcc
Confidence            4444444444567999999999999999999874 34443

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.03  E-value=3.2e-05  Score=59.93  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=62.2

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC------------------------------
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS------------------------------   54 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~------------------------------   54 (147)
                      -|++.++|+.|+++|++++|+||+. +..+...++.+|+..+|+.+...+                              
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~-Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~  228 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGN-REHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT  228 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence            3999999999999999999999887 566789999999999997531000                              


Q ss_pred             ---CCCCcHHHHHHHHHHcCCCC-CcEEEEeCCcc
Q 032106           55 ---SWSHKTDHFQRIHSRTGVPF-NSMLFFDDEDR   85 (147)
Q Consensus        55 ---~~kp~~~~~~~~~~~~~~~~-~~~v~VgDs~~   85 (147)
                         .--.+|....+.+++.|+.. ..+-.|+|-..
T Consensus       229 ~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~  263 (303)
T PHA03398        229 DVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKS  263 (303)
T ss_pred             cccCCCCCCeehHHHHHHcCcceeccEEEeccCcc
Confidence               01124667778888899876 77888888765

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.98  E-value=1.7e-05  Score=56.12  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=56.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-cc-ccc---eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MF-VAK---EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f-~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||+.++|+.|.+. +.++|+|++. +..+..+++.++... +| +.+   +.+..     ...+.+-.-++.+.+.+
T Consensus        58 ~~rPgv~efL~~l~~~-yel~I~T~~~-~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~-----~~~KdL~~i~~~d~~~v  130 (156)
T TIGR02250        58 KLRPFLHEFLKEASKL-YEMHVYTMGT-RAYAQAIAKLIDPDGKYFGDRIISRDESGS-----PHTKSLLRLFPADESMV  130 (156)
T ss_pred             EECCCHHHHHHHHHhh-cEEEEEeCCc-HHHHHHHHHHhCcCCCeeccEEEEeccCCC-----CccccHHHHcCCCcccE
Confidence            3689999999999866 9999999888 788899999999884 78 432   22111     11122223357788999


Q ss_pred             EEEeCCccc
Q 032106           78 LFFDDEDRN   86 (147)
Q Consensus        78 v~VgDs~~D   86 (147)
                      ++|||++.-
T Consensus       131 vivDd~~~~  139 (156)
T TIGR02250       131 VIIDDREDV  139 (156)
T ss_pred             EEEeCCHHH
Confidence            999999853

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.97  E-value=5.8e-05  Score=56.95  Aligned_cols=53  Identities=21%  Similarity=0.299  Sum_probs=47.6

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +..+...+|...++.+++.+|++++++++|||+.+|+.+++.++..++++...
T Consensus       160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            56677889999999999999999999999999999999999977777888664

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.94  E-value=4e-05  Score=55.42  Aligned_cols=87  Identities=15%  Similarity=0.187  Sum_probs=63.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC----ccc--------ccccc----------eecCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN----IKS--------MFVAK----------EIFSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g----l~~--------~f~~~----------~~~~~~kp~~   60 (147)
                      .+-||.+++++.++++++++.|+|++- ...+..+++.++    +..        +++.-          ..++..|+  
T Consensus        73 ~Idp~fKef~e~ike~di~fiVvSsGm-~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~--  149 (220)
T COG4359          73 KIDPGFKEFVEWIKEHDIPFIVVSSGM-DPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS--  149 (220)
T ss_pred             ccCccHHHHHHHHHHcCCCEEEEeCCC-chHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc--
Confidence            467999999999999999999999776 667789998876    211        11110          23344333  


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCe
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~   96 (147)
                          ..++.|.-.++.++|.||+..|+.+|+.....
T Consensus       150 ----~vI~~l~e~~e~~fy~GDsvsDlsaaklsDll  181 (220)
T COG4359         150 ----SVIHELSEPNESIFYCGDSVSDLSAAKLSDLL  181 (220)
T ss_pred             ----hhHHHhhcCCceEEEecCCcccccHhhhhhhH
Confidence                24456666778899999999999999987654

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.94  E-value=6.5e-05  Score=66.75  Aligned_cols=93  Identities=13%  Similarity=0.051  Sum_probs=67.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc----cc-----c------------cceecCCCCCcHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS----MF-----V------------AKEIFSSWSHKTD   61 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~----~f-----~------------~~~~~~~~kp~~~   61 (147)
                      .+.|+++++++.|++.|+++.++|+-+ +..+..+.+.+|+..    .+     +            ....+...  .|+
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~--sPe  655 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDN-IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARS--SPL  655 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEEC--CHH
Confidence            577999999999999999999999554 888999999999962    11     0            01233332  333


Q ss_pred             HHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           62 HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      -=..+.+.+.-.-.-+.|+||+.||..+-+++.+...
T Consensus       656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIA  692 (941)
T TIGR01517       656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFS  692 (941)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCccee
Confidence            3333444443334579999999999999999988754

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.73  E-value=0.00027  Score=63.53  Aligned_cols=93  Identities=10%  Similarity=0.065  Sum_probs=67.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc--c------------cc-----------------ce
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM--F------------VA-----------------KE   51 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~--f------------~~-----------------~~   51 (147)
                      .+.|+++++++.|++.|+++.++|+-+ +..+..+.+++|+..-  .            +.                 ..
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~  724 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL  724 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence            468999999999999999999999555 8888999999999531  0            00                 01


Q ss_pred             ecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           52 IFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        52 ~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      .+..  -.|+.=..+.+.+.-...-+.|+||+.+|..+-+.+++...
T Consensus       725 V~ar--~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA  769 (1053)
T TIGR01523       725 VIAR--CAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA  769 (1053)
T ss_pred             EEEe--cCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence            1222  23333334444444344679999999999999999988755

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.68  E-value=6.2e-05  Score=56.27  Aligned_cols=48  Identities=13%  Similarity=0.275  Sum_probs=43.3

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +..+...+|...++.+++++|++++++++|||+.+|+.+.+.+|....
T Consensus       152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia  199 (236)
T TIGR02471       152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV  199 (236)
T ss_pred             EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE
Confidence            566678899999999999999999999999999999999999887654

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.67  E-value=0.00026  Score=61.69  Aligned_cols=85  Identities=16%  Similarity=0.279  Sum_probs=64.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ++-|++..++..|++.|++++++|+-+ ...++.+.+++|++..+..  ..  +..|.+.++++.+.    ...+.||||
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn-~~aA~svA~~VGi~~V~ae--v~--P~~K~~~Ik~lq~~----~~~VaMVGD  793 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDN-DAAARSVAQQVGIDNVYAE--VL--PEQKAEKIKEIQKN----GGPVAMVGD  793 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCC-HHHHHHHHHhhCcceEEec--cC--chhhHHHHHHHHhc----CCcEEEEeC
Confidence            467999999999999999999999555 8888999999996654432  22  22455566666543    366999999


Q ss_pred             CcccHHHHHHcCCe
Q 032106           83 EDRNIDAVSKMGVT   96 (147)
Q Consensus        83 s~~Di~~a~~~Gi~   96 (147)
                      +.||-.+-..+.+.
T Consensus       794 GINDaPALA~AdVG  807 (951)
T KOG0207|consen  794 GINDAPALAQADVG  807 (951)
T ss_pred             CCCccHHHHhhccc
Confidence            99998777776664

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=97.66  E-value=6.2e-05  Score=54.85  Aligned_cols=45  Identities=13%  Similarity=0.147  Sum_probs=41.4

Q ss_pred             CCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           54 SSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        54 ~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +...+|+..++.++++++++++++++|||+.+|+.+++.+|+..+
T Consensus       159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            347899999999999999999999999999999999999998754

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.62  E-value=0.00069  Score=51.62  Aligned_cols=96  Identities=22%  Similarity=0.357  Sum_probs=73.6

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHH---HHHhcCccccccc--------------------------ceecCC
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANT---FLEKLNIKSMFVA--------------------------KEIFSS   55 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~---~l~~~gl~~~f~~--------------------------~~~~~~   55 (147)
                      -+.++++|+.|+++|+++..+|... +.....   -|+.+|++  |+.                          +-.+..
T Consensus        83 e~~~~~~i~~lq~~~~~v~alT~~~-~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   83 ESDVPNIINSLQNKGIPVIALTARG-PNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             chhHHHHHHHHHHCCCcEEEEcCCC-hhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            4788999999999999999999776 554444   34456664  211                          022233


Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHH----HcCCeEEEECCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVS----KMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~----~~Gi~~i~v~~~  103 (147)
                      .-++..++..++.++|..|+.+|||+|+..++....    ..||.++++.+.
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt  211 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT  211 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence            678999999999999999999999999999876544    469998888764

The function is not known.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.59  E-value=0.00012  Score=55.62  Aligned_cols=49  Identities=16%  Similarity=0.306  Sum_probs=44.1

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +.....-.|...++.+++.+|+++++++.|||+.+|+.+.+.+|..+++
T Consensus       189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm  237 (270)
T PRK10513        189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM  237 (270)
T ss_pred             EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence            5666678899999999999999999999999999999999999996444

>PRK10976 putative hydrolase; Provisional

Probab=97.58  E-value=0.00012  Score=55.60  Aligned_cols=49  Identities=16%  Similarity=0.302  Sum_probs=43.4

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +.....-.|...++.+++.+|+++++++.|||+.+|+.+.+.+|..+++
T Consensus       183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm  231 (266)
T PRK10976        183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM  231 (266)
T ss_pred             EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee
Confidence            5555667889999999999999999999999999999999999986443

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.53  E-value=0.00047  Score=61.21  Aligned_cols=97  Identities=14%  Similarity=0.128  Sum_probs=71.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc------cc-----------------eecCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV------AK-----------------EIFSSWSHK   59 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~------~~-----------------~~~~~~kp~   59 (147)
                      .|.|+++++++.|+++|+++.++| ++.+..+..+.++.|+..--.      +.                 ..+  ..-.
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiT-GD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~Vf--ARvs  623 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMIT-GDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVF--ARVS  623 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEEC-CCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEE--EEcC
Confidence            477999999999999999999999 555899999999999743211      10                 111  2234


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           60 TDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      |+.=..+.+.+.-.-.-+.|.||+.||..|-++|.+.......
T Consensus       624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~  666 (917)
T COG0474         624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE  666 (917)
T ss_pred             HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence            4444444454544457799999999999999999998755543

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.52  E-value=0.001  Score=51.07  Aligned_cols=89  Identities=12%  Similarity=0.159  Sum_probs=56.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      ..++||+.++|+.|+++|++++++||+....  .....++.+|+..-.+  +.+.    ........+++......++++
T Consensus        17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~t----s~~~~~~~l~~~~~~~~~v~~   90 (279)
T TIGR01452        17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFS----SALCAARLLRQPPDAPKAVYV   90 (279)
T ss_pred             CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEec----HHHHHHHHHHhhCcCCCEEEE
Confidence            3578999999999999999999999865222  2224567788753222  2322    234444555554444567999


Q ss_pred             EeCCcccHHHHHHcCCeE
Q 032106           80 FDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~   97 (147)
                      +|+.. -....+.+|+..
T Consensus        91 iG~~~-~~~~l~~~g~~~  107 (279)
T TIGR01452        91 IGEEG-LRAELDAAGIRL  107 (279)
T ss_pred             EcCHH-HHHHHHHCCCEE
Confidence            99852 234455566653

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.52  E-value=0.00074  Score=50.74  Aligned_cols=97  Identities=11%  Similarity=0.025  Sum_probs=60.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHhcCcccccccc--eecC-CCCC----cHHHHHHHHHHcCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEKLNIKSMFVAK--EIFS-SWSH----KTDHFQRIHSRTGV   72 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~~gl~~~f~~~--~~~~-~~kp----~~~~~~~~~~~~~~   72 (147)
                      ..+.|++.++++.|+++|++++++|+.....  ....-|...|+..+ +..  .... ..++    |.....++.++ |.
T Consensus       119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~-GY  196 (229)
T TIGR01675       119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE-GY  196 (229)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC-Cc
Confidence            3578999999999999999999999887322  13455677887654 221  1111 1121    33333333322 22


Q ss_pred             CCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           73 PFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        73 ~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                        .=+..|||..+|+.+. -+|.+++-++.+
T Consensus       197 --rIv~~iGDq~sDl~G~-~~~~RtFKLPNP  224 (229)
T TIGR01675       197 --RIWGNIGDQWSDLLGS-PPGRRTFKLPNP  224 (229)
T ss_pred             --eEEEEECCChHHhcCC-CccCceeeCCCC
Confidence              2378899999999753 456666665543

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.51  E-value=0.00079  Score=60.32  Aligned_cols=94  Identities=13%  Similarity=0.087  Sum_probs=66.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc----------------------------cccc----
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM----------------------------FVAK----   50 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~----------------------------f~~~----   50 (147)
                      .+.|+++++|+.|+++|+++.++|+.+ ...+..+.+.+|+..-                            ++..    
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~  646 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDH-PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD  646 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence            467999999999999999999999666 7888899999998421                            0000    


Q ss_pred             -------------e--ecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           51 -------------E--IFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        51 -------------~--~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                                   .  .+..  -.|+.-..+.+.+.-...-+.|+||+.+|..+-+.+.+...+
T Consensus       647 l~~~el~~~~~~~~~~VfaR--~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam  708 (997)
T TIGR01106       647 MTSEQLDEILKYHTEIVFAR--TSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM  708 (997)
T ss_pred             CCHHHHHHHHHhcCCEEEEE--CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence                         0  2222  233333333343333345699999999999999999887543

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.47  E-value=0.0013  Score=54.02  Aligned_cols=90  Identities=20%  Similarity=0.385  Sum_probs=70.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC-c---ccccccceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN-I---KSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g-l---~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+|-.....+..|+++|+.++|+|-++ ...++.+..+.. +   .+.|..  ..-.+.||.+.++.+++++++..+..+
T Consensus       255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~-~~da~evF~khp~MiLkeedfa~--~~iNW~~K~eNirkIAkklNlg~dSmv  331 (574)
T COG3882         255 EAFKTFQNFIKGLKKQGVLLAVCSKNT-EKDAKEVFRKHPDMILKEEDFAV--FQINWDPKAENIRKIAKKLNLGLDSMV  331 (574)
T ss_pred             hhHHHHHHHHHHHHhccEEEEEecCCc-hhhHHHHHhhCCCeEeeHhhhhh--heecCCcchhhHHHHHHHhCCCccceE
Confidence            456677889999999999999999555 455566665542 1   112222  223478999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCC
Q 032106           79 FFDDEDRNIDAVSKMGV   95 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi   95 (147)
                      ||+|++...+-.++-+-
T Consensus       332 FiDD~p~ErE~vk~~~~  348 (574)
T COG3882         332 FIDDNPAERELVKRELP  348 (574)
T ss_pred             EecCCHHHHHHHHhcCc
Confidence            99999999998888765

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.46  E-value=0.001  Score=55.22  Aligned_cols=82  Identities=18%  Similarity=0.183  Sum_probs=62.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+   |.      .  -.|+.-..+.+.+.-....+.||||
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~-~~~a~~ia~~lgi---~~------~--~~p~~K~~~v~~l~~~g~~v~~vGD  414 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDN-VLTAKAIAKELGI---FA------R--VTPEEKAALVEALQKKGRVVAMTGD  414 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCc---ee------c--cCHHHHHHHHHHHHHCCCEEEEECC
Confidence            578999999999999999999999555 7888889999987   11      1  1333333444443333377999999


Q ss_pred             CcccHHHHHHcCCe
Q 032106           83 EDRNIDAVSKMGVT   96 (147)
Q Consensus        83 s~~Di~~a~~~Gi~   96 (147)
                      +.+|..+.+.+++.
T Consensus       415 g~nD~~al~~Advg  428 (499)
T TIGR01494       415 GVNDAPALKKADVG  428 (499)
T ss_pred             ChhhHHHHHhCCCc
Confidence            99999999988765

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=97.43  E-value=0.00085  Score=45.70  Aligned_cols=88  Identities=30%  Similarity=0.335  Sum_probs=68.7

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------eecCCCCCcHHHHHHHHHHcCCC
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------EIFSSWSHKTDHFQRIHSRTGVP   73 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------~~~~~~kp~~~~~~~~~~~~~~~   73 (147)
                      +|.+|++++..|..|++.|+.++++|++..+.++...|+.+.+..-+...       ......-.+-..|..+-+..+..
T Consensus        42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~  121 (144)
T KOG4549|consen   42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSI  121 (144)
T ss_pred             eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcc
Confidence            36789999999999999999999999999999999999988876433221       12222335667788888888988


Q ss_pred             CCcEEEEeCCcccHH
Q 032106           74 FNSMLFFDDEDRNID   88 (147)
Q Consensus        74 ~~~~v~VgDs~~Di~   88 (147)
                      ..+..+++|--++-+
T Consensus       122 ~k~~~~fdDesrnke  136 (144)
T KOG4549|consen  122 EKNKQVFDDESRNKE  136 (144)
T ss_pred             hhceeeecccccCCc
Confidence            888999988766544

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.39  E-value=0.0025  Score=44.95  Aligned_cols=96  Identities=21%  Similarity=0.256  Sum_probs=64.4

Q ss_pred             CchhHHHHHHHHHHC-C-CeEEEEcCCCCh-------HHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHc-C--
Q 032106            4 LYPHAKGILHALKDK-G-IDVAVASRSPSP-------DIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRT-G--   71 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~-g-~~l~i~S~~~~~-------~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~-~--   71 (147)
                      ..|.-..-++.++.- | ..++++||+.-.       ..++.+-...|+.       ....++.||.+-.++...+ +  
T Consensus        62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp-------VlRHs~kKP~ct~E~~~y~~~Ns  134 (190)
T KOG2961|consen   62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP-------VLRHSVKKPACTAEEVEYHFGNS  134 (190)
T ss_pred             cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc-------eEeecccCCCccHHHHHHHhCCc
Confidence            445555666666654 3 778999976421       1233333444543       3344555666666665543 4  


Q ss_pred             --CCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCCh
Q 032106           72 --VPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        72 --~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                        -.+++++||||.+. ||..|..+|.-.+|..+|...
T Consensus       135 hv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~  172 (190)
T KOG2961|consen  135 HVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA  172 (190)
T ss_pred             ccCChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence              47899999999988 999999999999999988653

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.36  E-value=0.0008  Score=50.88  Aligned_cols=51  Identities=10%  Similarity=0.158  Sum_probs=45.0

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCC--CCcEEEEeCCcccHHHHHHcCCeEEEEC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVP--FNSMLFFDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~--~~~~v~VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      +..+..-.|...++++++.+|++  .+++++|||+.+|+.+.+.+|..+++-.
T Consensus       169 ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~N  221 (256)
T TIGR01486       169 HVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPG  221 (256)
T ss_pred             EEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCC
Confidence            56666778999999999999999  9999999999999999999998866543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.31  E-value=0.00077  Score=50.62  Aligned_cols=96  Identities=11%  Similarity=0.120  Sum_probs=60.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--HHHHHHHHhcCcccccccc-eecCC------CCCcHHHHHHHHHH-cCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--DIANTFLEKLNIKSMFVAK-EIFSS------WSHKTDHFQRIHSR-TGV   72 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--~~~~~~l~~~gl~~~f~~~-~~~~~------~kp~~~~~~~~~~~-~~~   72 (147)
                      .++||+.++++.++++|+.|+++||+.+.  .....-|...|+..+=..+ .....      ..-|..-...+.++ +.+
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I  194 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI  194 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence            46899999999999999999999987743  2333446677764321111 11111      11255566666666 444


Q ss_pred             CCCcEEEEeCCcccHHHHHHc---CCeEEEECC
Q 032106           73 PFNSMLFFDDEDRNIDAVSKM---GVTGILVGN  102 (147)
Q Consensus        73 ~~~~~v~VgDs~~Di~~a~~~---Gi~~i~v~~  102 (147)
                          +++|||+..|+..++..   +.+.+-++.
T Consensus       195 ----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN  223 (229)
T PF03767_consen  195 ----IANIGDQLSDFSGAKTAGARAERWFKLPN  223 (229)
T ss_dssp             ----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred             ----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence                89999999999984332   445555544

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.29  E-value=0.00029  Score=51.19  Aligned_cols=89  Identities=24%  Similarity=0.377  Sum_probs=51.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCCh------HHHHHHHHhc-CcccccccceecCCCCCcHHHHHHHHHHcCCCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSP------DIANTFLEKL-NIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPF   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~------~~~~~~l~~~-gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~   74 (147)
                      ..++||+.++|+.|.+.|+.+.++|.+...      ......+++. +... ++. -.+...|  .        .++.  
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~-~~~~~~K--~--------~v~~--  137 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDN-LIFTGDK--T--------LVGG--  137 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCC-EEEESSG--G--------GC----
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hhe-EEEecCC--C--------eEec--
Confidence            368899999999999999666666655433      1222334433 2111 111 1222222  1        1222  


Q ss_pred             CcEEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           75 NSMLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                       + ++|+|++.++..+...|+.++++..+++.
T Consensus       138 -D-vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr  167 (191)
T PF06941_consen  138 -D-VLIDDRPHNLEQFANAGIPVILFDQPYNR  167 (191)
T ss_dssp             -S-EEEESSSHHHSS-SSESSEEEEE--GGGT
T ss_pred             -c-EEecCChHHHHhccCCCceEEEEcCCCCC
Confidence             2 89999999999999999999999877664

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.19  E-value=0.00067  Score=51.80  Aligned_cols=50  Identities=8%  Similarity=0.042  Sum_probs=44.4

Q ss_pred             eecCCCCCcHHHHHHHHHHcCC---CCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGV---PFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~---~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      +.....-.|...++.+++.+|+   ++++++.|||+.||+.+-+.+|..+++-
T Consensus       180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~  232 (271)
T PRK03669        180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK  232 (271)
T ss_pred             EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence            5566677899999999999999   9999999999999999999999875554

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.15  E-value=0.0038  Score=56.38  Aligned_cols=41  Identities=22%  Similarity=0.294  Sum_probs=36.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      .+-|+++++++.|+++|+++.++|+-+ +..+..+.++.|+.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~-~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDN-PLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCC
Confidence            478999999999999999999999555 88889999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PLN02887 hydrolase family protein

Probab=97.15  E-value=0.00077  Score=57.04  Aligned_cols=49  Identities=16%  Similarity=0.261  Sum_probs=43.7

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +++...-.|...++.+++.+|+++++++.|||+.||+++.+.+|..+++
T Consensus       500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM  548 (580)
T PLN02887        500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL  548 (580)
T ss_pred             EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence            5666677899999999999999999999999999999999999986443

>smart00775 LNS2 LNS2 domain

Probab=97.14  E-value=0.0083  Score=42.43  Aligned_cols=93  Identities=15%  Similarity=0.201  Sum_probs=59.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHH---HHHHHh-----cCccc--cccc-ce-------ecCCCCC---cHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIA---NTFLEK-----LNIKS--MFVA-KE-------IFSSWSH---KTD   61 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~---~~~l~~-----~gl~~--~f~~-~~-------~~~~~kp---~~~   61 (147)
                      ...|++.+++++|+++|++++++|+++ ...+   +..+..     .++..  .+-. ..       .+-..+|   |.+
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp-~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARP-IGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCc-HHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            568999999999999999999999887 3433   355655     23321  1111 00       1112233   555


Q ss_pred             HHHHHHHHcCCCCCcE-EEEeCCcccHHHHHHcCCe
Q 032106           62 HFQRIHSRTGVPFNSM-LFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        62 ~~~~~~~~~~~~~~~~-v~VgDs~~Di~~a~~~Gi~   96 (147)
                      .+..+++.+.-.--.. +-+||+..|+++=+++|+.
T Consensus       106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~  141 (157)
T smart00775      106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP  141 (157)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence            6666665554222233 4478889999999999995

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=97.13  E-value=0.0023  Score=48.33  Aligned_cols=89  Identities=13%  Similarity=0.066  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCCChHHHHHHHHhcCcccccccceecCC-CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           19 GIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS-WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        19 g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +..-++||++.-... -..+=.++|+.+|....++.. .-.|..+|++|..++|-+....++|||+...-.+|+.++|++
T Consensus       175 ~~vNvLVTs~qLVPa-LaKcLLy~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPF  253 (274)
T TIGR01658       175 NCINVLVTSGQLIPS-LAKCLLFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPF  253 (274)
T ss_pred             ceeEEEEEcCccHHH-HHHHHHhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCe
Confidence            345677775553222 233445788899987544443 346889999999999998899999999999999999999999


Q ss_pred             EEECCCCChHH
Q 032106           98 ILVGNGVNLGA  108 (147)
Q Consensus        98 i~v~~~~~~~~  108 (147)
                      +-+....+...
T Consensus       254 w~I~~h~Dl~~  264 (274)
T TIGR01658       254 VKIDLHPDSSH  264 (274)
T ss_pred             EEeecCCCHHH
Confidence            99987665443

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.11  E-value=0.003  Score=45.71  Aligned_cols=92  Identities=16%  Similarity=0.319  Sum_probs=63.2

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChH---HHHHHHHhcCcccccccceecCCCCCcHHHHH--HHHHHcCCCCCcEEEEe
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPD---IANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQ--RIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~--~~~~~~~~~~~~~v~Vg   81 (147)
                      -+++++..-.++|-.++.+|+.....   +.+.+.+.+.+......  ++...||++.-|.  ..+++-++    -++-|
T Consensus       118 vA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv--~f~Gdk~k~~qy~Kt~~i~~~~~----~IhYG  191 (237)
T COG3700         118 VARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV--IFAGDKPKPGQYTKTQWIQDKNI----RIHYG  191 (237)
T ss_pred             HHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce--eeccCCCCcccccccHHHHhcCc----eEEec
Confidence            35677777788899999999765221   33345555666544443  5555667666553  34455555    58999


Q ss_pred             CCcccHHHHHHcCCeEEEECCCC
Q 032106           82 DEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        82 Ds~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ||.+||.+|+.+|++.|-+.+..
T Consensus       192 DSD~Di~AAkeaG~RgIRilRAa  214 (237)
T COG3700         192 DSDNDITAAKEAGARGIRILRAA  214 (237)
T ss_pred             CCchhhhHHHhcCccceeEEecC
Confidence            99999999999999988876543

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.11  E-value=0.0014  Score=49.35  Aligned_cols=49  Identities=18%  Similarity=0.260  Sum_probs=41.8

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHc-------CCeEEEECCC
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKM-------GVTGILVGNG  103 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~-------Gi~~i~v~~~  103 (147)
                      ..-.|...+..++++++..+.+++||||+.+|+.+++.+       |..++.+.++
T Consensus       164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g  219 (244)
T TIGR00685       164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG  219 (244)
T ss_pred             CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence            344567999999999999999999999999999999988       6777778533

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.04  E-value=0.0041  Score=54.15  Aligned_cols=94  Identities=14%  Similarity=0.132  Sum_probs=68.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc-------------cc------------eecCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV-------------AK------------EIFSSWS   57 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~-------------~~------------~~~~~~k   57 (147)
                      .|.|++.++++.+++.|+++-++|+-+ ...+..+.++.|+...=+             ..            ..+.+  
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~-~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR--  660 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDN-KETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFAR--  660 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEe--
Confidence            467999999999999999999999555 899999999999854322             10            11112  


Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      -.|..-.++.+.+.-.-+=+.|-||+.+|-.+-+.+.|...+
T Consensus       661 ~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM  702 (972)
T KOG0202|consen  661 AEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM  702 (972)
T ss_pred             cCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence            233334444444444446699999999999999999887443

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.04  E-value=0.00051  Score=48.21  Aligned_cols=91  Identities=16%  Similarity=0.297  Sum_probs=56.5

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCc-ccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI-KSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl-~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      +.||+.++|+.|.+. +.++|.|.+. +..++.+++.+.- ..+|..+-.-..+......+.+-++.+|.+.+++|+|+|
T Consensus        37 ~RP~l~~FL~~l~~~-~ev~i~T~~~-~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD  114 (159)
T PF03031_consen   37 LRPGLDEFLEELSKH-YEVVIWTSAS-EEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDD  114 (159)
T ss_dssp             E-TTHHHHHHHHHHH-CEEEEE-SS--HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES
T ss_pred             eCchHHHHHHHHHHh-ceEEEEEeeh-hhhhhHHHHhhhhhccccccccccccccccccccccchHHHhhccccEEEEeC
Confidence            579999999999766 9999999776 8888999999886 456765311110100010112456667778899999999


Q ss_pred             CcccHHHHHHcCCe
Q 032106           83 EDRNIDAVSKMGVT   96 (147)
Q Consensus        83 s~~Di~~a~~~Gi~   96 (147)
                      +..-...-...++.
T Consensus       115 ~~~~~~~~~~N~i~  128 (159)
T PF03031_consen  115 SPRKWALQPDNGIP  128 (159)
T ss_dssp             -GGGGTTSGGGEEE
T ss_pred             CHHHeeccCCceEE
Confidence            99855433444444

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=97.04  E-value=0.0028  Score=52.62  Aligned_cols=86  Identities=12%  Similarity=0.144  Sum_probs=67.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                      .-||+++-+.+|++-|++...+|+-+ +-.+..+.+..|+++|.-.        .+|+--..++++.+-.-.=+.|.||+
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGDN-~~TAa~IA~EAGVDdfiAe--------atPEdK~~~I~~eQ~~grlVAMtGDG  518 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGDN-PLTAAAIAAEAGVDDFIAE--------ATPEDKLALIRQEQAEGRLVAMTGDG  518 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHhCchhhhhc--------CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence            45899999999999999999999555 8888888999999887543        24454455555555555669999999


Q ss_pred             cccHHHHHHcCCeEE
Q 032106           84 DRNIDAVSKMGVTGI   98 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i   98 (147)
                      .+|-.+-..+.+...
T Consensus       519 TNDAPALAqAdVg~A  533 (681)
T COG2216         519 TNDAPALAQADVGVA  533 (681)
T ss_pred             CCcchhhhhcchhhh
Confidence            999988888776633

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=96.97  E-value=0.0058  Score=55.18  Aligned_cols=41  Identities=15%  Similarity=0.123  Sum_probs=34.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      ++.||++++|+.|+++|++++++|+-+ ...+..+....|+.
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~-~~TA~~IA~~~~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDK-VETAINIGYSCRLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCc-HHHHHHHHHHhCCC
Confidence            467999999999999999999999554 77777887777764

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=96.91  E-value=0.0039  Score=47.23  Aligned_cols=53  Identities=23%  Similarity=0.437  Sum_probs=42.4

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +.++..-.|....+++++++++++++++++|||.+|+.+. ..+...|.|....
T Consensus       158 dilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~  210 (247)
T PF05116_consen  158 DILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ  210 (247)
T ss_dssp             EEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred             EEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence            5666677899999999999999999999999999999987 7788888887743

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=96.78  E-value=0.01  Score=44.83  Aligned_cols=81  Identities=11%  Similarity=0.112  Sum_probs=56.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHH---HHHHHhcCcccccccceec-CCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIA---NTFLEKLNIKSMFVAKEIF-SSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~---~~~l~~~gl~~~f~~~~~~-~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+.||+.++|+....+|..++-+||+......   ..-|.+.|+...-+.--.+ ...+++..-++.+.+.+    .-++
T Consensus       122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~iVm  197 (274)
T COG2503         122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----KIVM  197 (274)
T ss_pred             ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhcc----ceee
Confidence            57899999999999999999999998743312   2246667776543332122 22566777777776633    4599


Q ss_pred             EEeCCcccH
Q 032106           79 FFDDEDRNI   87 (147)
Q Consensus        79 ~VgDs~~Di   87 (147)
                      +|||+..|.
T Consensus       198 ~vGDNl~DF  206 (274)
T COG2503         198 LVGDNLDDF  206 (274)
T ss_pred             EecCchhhh
Confidence            999999874

>PLN02382 probable sucrose-phosphatase

Probab=96.65  E-value=0.0044  Score=50.47  Aligned_cols=53  Identities=17%  Similarity=0.254  Sum_probs=45.4

Q ss_pred             eecCCCCCcHHHHHHHHHHc---CCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRT---GVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~---~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +..+..-.|...++.+++++   |+++++++.+||+.||+++.+.+|+..+.+.++
T Consensus       168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA  223 (413)
T PLN02382        168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA  223 (413)
T ss_pred             EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence            55666667999999999999   999999999999999999999999655666553

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.64  E-value=0.0064  Score=49.89  Aligned_cols=93  Identities=12%  Similarity=0.096  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCC-hHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106            8 AKGILHALKDKGIDVAVASRSPS-PDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus         8 v~~~L~~L~~~g~~l~i~S~~~~-~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                      ..++.+.+.+.|.+|.++|.-.- ..+++.+|...|.+-+--.+   ..+...|.....|..+++.-+++|..++.+||.
T Consensus       104 ~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN  183 (635)
T COG5610         104 NIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHCGDN  183 (635)
T ss_pred             chHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEEecCc
Confidence            45788999999999999995443 34667788888876321111   233447889999999999999999999999999


Q ss_pred             cc-cHHHHHHcCCeEEEE
Q 032106           84 DR-NIDAVSKMGVTGILV  100 (147)
Q Consensus        84 ~~-Di~~a~~~Gi~~i~v  100 (147)
                      .+ |+..++++|+.+.+.
T Consensus       184 ~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         184 WVADYLKPKNLGISTLFY  201 (635)
T ss_pred             hhhhhcCccccchhHHHH
Confidence            88 999999999987755

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=96.64  E-value=0.0013  Score=49.87  Aligned_cols=114  Identities=13%  Similarity=0.167  Sum_probs=63.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc----------cccc-c--eecCC----CCCcHH-HHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS----------MFVA-K--EIFSS----WSHKTD-HFQ   64 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~----------~f~~-~--~~~~~----~kp~~~-~~~   64 (147)
                      .+.+|+.++++.|.++++++.|.|.+- ..+++.++++.+...          .|+. .  ..+..    .-.|.+ .+.
T Consensus        90 ~LRdg~~~~f~~L~~~~IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~  168 (246)
T PF05822_consen   90 MLRDGVEEFFDKLEEHNIPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALE  168 (246)
T ss_dssp             -B-BTHHHHHHHHHCTT--EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHT
T ss_pred             hhhcCHHHHHHHHHhcCCCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccccc
Confidence            567899999999999999999999776 889999999987532          2322 1  11111    111121 121


Q ss_pred             --HHHHHcCCCCCcEEEEeCCcccHHHHHHc-CC---eEEEECCCCChHHHHHHHHHHHHhhcc
Q 032106           65 --RIHSRTGVPFNSMLFFDDEDRNIDAVSKM-GV---TGILVGNGVNLGALRQGLTKFSQNWNT  122 (147)
Q Consensus        65 --~~~~~~~~~~~~~v~VgDs~~Di~~a~~~-Gi---~~i~v~~~~~~~~~~~~l~~~~~~~~~  122 (147)
                        ...+.+ -...+++..||+..|+.+|..+ ..   -.|++....    .++.++.|.+...+
T Consensus       169 ~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~----ve~~l~~Y~~~yDI  227 (246)
T PF05822_consen  169 DSPYFKQL-KKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDK----VEENLEKYLEAYDI  227 (246)
T ss_dssp             THHHHHCT-TT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SS----HHHHHHHHHCCSSE
T ss_pred             CchHHHHh-ccCCcEEEecCccCChHhhcCCCccccEEEEEecccC----HHHHHHHHHhcCCE
Confidence              011111 2457899999999999998766 22   234443422    34456677666543

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=96.45  E-value=0.026  Score=45.27  Aligned_cols=94  Identities=18%  Similarity=0.149  Sum_probs=68.5

Q ss_pred             CCeEEEEcCCCChHHHHHHHHhcCcccccccceecCC-CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           19 GIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS-WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        19 g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      ++.-+++|+...... -..+=.+||...|....++.. .-.|..+|++|..++|. .-..++|||+...-.+|+++.|.+
T Consensus       370 ncvnVlvTttqLipa-laKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf  447 (468)
T KOG3107|consen  370 NCVNVLVTTTQLIPA-LAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF  447 (468)
T ss_pred             ceeEEEEeccchhHH-HHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence            456777885543222 223334677777876433333 33578899999999998 577899999999999999999999


Q ss_pred             EEECCCCChHHHHHHHH
Q 032106           98 ILVGNGVNLGALRQGLT  114 (147)
Q Consensus        98 i~v~~~~~~~~~~~~l~  114 (147)
                      +-+....+...+..+|+
T Consensus       448 wrI~~h~Dl~~l~~aL~  464 (468)
T KOG3107|consen  448 WRISSHSDLDALYSALE  464 (468)
T ss_pred             EeeccCccHHHHhhhcc
Confidence            99988777776666654

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.38  E-value=0.0056  Score=45.73  Aligned_cols=41  Identities=7%  Similarity=0.069  Sum_probs=32.8

Q ss_pred             CcHHHHHHHHHHcCC--CCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           58 HKTDHFQRIHSRTGV--PFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        58 p~~~~~~~~~~~~~~--~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      .|....+.+++.+++  .+.++++|||+.+|+.+.+.+|+.++
T Consensus       181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            345566677777765  66789999999999999999998754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PLN03190 aminophospholipid translocase; Provisional

Probab=96.29  E-value=0.032  Score=51.06  Aligned_cols=40  Identities=18%  Similarity=0.179  Sum_probs=31.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI   43 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl   43 (147)
                      ++-+|+.++++.|+++|+++.++|+-+ ...+..+....+|
T Consensus       726 ~lr~~v~~~I~~l~~agi~v~mlTGD~-~~tAi~IA~s~~L  765 (1178)
T PLN03190        726 KLQQGVPEAIESLRTAGIKVWVLTGDK-QETAISIGYSSKL  765 (1178)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHhCC
Confidence            578999999999999999999999554 5655555554433

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.27  E-value=0.012  Score=45.12  Aligned_cols=49  Identities=14%  Similarity=0.213  Sum_probs=40.4

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHc---CCeEEEECCCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKM---GVTGILVGNGV  104 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~---Gi~~i~v~~~~  104 (147)
                      .-.|...+..+++.+|+..+++++|||+.+|+.+.+.+   +..++.|+.+.
T Consensus       172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~  223 (266)
T PRK10187        172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA  223 (266)
T ss_pred             CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence            45788899999999999999999999999999988877   44556776543

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=96.23  E-value=0.016  Score=46.20  Aligned_cols=96  Identities=19%  Similarity=0.269  Sum_probs=62.6

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc---Ccccccccce-------ecCC-C--------C---------
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL---NIKSMFVAKE-------IFSS-W--------S---------   57 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~---gl~~~f~~~~-------~~~~-~--------k---------   57 (147)
                      |....+|+.|+++|.+++++||++ -..+..-++.+   ++.++||.+-       .+.. .        |         
T Consensus       243 ~ql~~fl~kL~~~GKklFLiTNSP-ysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv  321 (510)
T KOG2470|consen  243 PQLLAFLRKLKDHGKKLFLITNSP-YSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV  321 (510)
T ss_pred             HHHHHHHHHHHHhcCcEEEEeCCc-hhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence            567889999999999999999998 45555434332   2234565530       0000 0        0         


Q ss_pred             ----CcH----HHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHH-HcCCeEEEECC
Q 032106           58 ----HKT----DHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVS-KMGVTGILVGN  102 (147)
Q Consensus        58 ----p~~----~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~-~~Gi~~i~v~~  102 (147)
                          +..    ......++-.|....+++++||.+. |+.... ++||++-.+-.
T Consensus       322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence                000    1223344556778899999999988 888776 89999887743

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=96.22  E-value=0.01  Score=45.16  Aligned_cols=41  Identities=12%  Similarity=0.218  Sum_probs=34.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHhcCcc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~~gl~   44 (147)
                      ++|++.++|+.|+++|++++++||+....  .....++.+|++
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~   64 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD   64 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            89999999999999999999999877553  345567778875

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=96.11  E-value=0.042  Score=42.33  Aligned_cols=98  Identities=12%  Similarity=0.106  Sum_probs=58.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCCh--HHHHHHHHhcCcccccccc--eecC-CCCC-----cHHHHHHHHHHcC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSP--DIANTFLEKLNIKSMFVAK--EIFS-SWSH-----KTDHFQRIHSRTG   71 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--~~~~~~l~~~gl~~~f~~~--~~~~-~~kp-----~~~~~~~~~~~~~   71 (147)
                      ..+.|++.++.+.|++.|++++++||+.+.  .....-|.+.|+..+ +..  ...+ ..+.     |.....++.+ -|
T Consensus       144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~-eG  221 (275)
T TIGR01680       144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ-EG  221 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH-cC
Confidence            357899999999999999999999988742  223334566777543 211  0111 1111     2222223222 22


Q ss_pred             CCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           72 VPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        72 ~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .  .=+..|||..+|+.+....+-++.-++++
T Consensus       222 Y--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       222 Y--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             c--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence            2  33788999999997555323577766655

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.99  E-value=0.019  Score=43.81  Aligned_cols=45  Identities=29%  Similarity=0.411  Sum_probs=38.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV   48 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~   48 (147)
                      ...+++.++|+.|++.|++++++|++. ...+...++.+++..+|-
T Consensus        21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~-~~~~~~~~~~l~l~~~~i   65 (273)
T PRK00192         21 YSYEPAKPALKALKEKGIPVIPCTSKT-AAEVEVLRKELGLEDPFI   65 (273)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCEE
Confidence            456889999999999999999999887 566688899999876653

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=95.92  E-value=0.1  Score=39.15  Aligned_cols=85  Identities=16%  Similarity=0.140  Sum_probs=47.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHh-cCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEK-LNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~-~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|++.++|+.|+++|+++.++||+..+.  .....+.. +|+.--.+  +.+..   ....-..+.++.  ....+++
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits---~~~~~~~l~~~~--~~~~v~v   86 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITS---GSVTKDLLRQRF--EGEKVYV   86 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeH---HHHHHHHHHHhC--CCCEEEE
Confidence            578999999999999999999999766222  22223444 67642222  22222   222222222222  2245777


Q ss_pred             EeCCcccHHHHHHcCC
Q 032106           80 FDDEDRNIDAVSKMGV   95 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi   95 (147)
                      +|.. .-.+.++.+|+
T Consensus        87 ~G~~-~~~~~l~~~g~  101 (236)
T TIGR01460        87 IGVG-ELRESLEGLGF  101 (236)
T ss_pred             ECCH-HHHHHHHHcCC
Confidence            7753 33444555554

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.89  E-value=0.088  Score=45.47  Aligned_cols=46  Identities=9%  Similarity=0.174  Sum_probs=41.0

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEE--eCCcccHHHHHHcCCeEEEE
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFF--DDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~V--gDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ..-.|...++.+++.+++..++++.|  ||+.||+.+-+.+|..++.-
T Consensus       610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~  657 (694)
T PRK14502        610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQ  657 (694)
T ss_pred             CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEc
Confidence            35689999999999999998988888  99999999999999987654

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=95.86  E-value=0.071  Score=40.27  Aligned_cols=40  Identities=18%  Similarity=0.221  Sum_probs=31.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI   43 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl   43 (147)
                      -++.||+.++++.|.+. ..-+|+|.+. ...+++.+..+|+
T Consensus        82 a~lvPgA~etm~~l~~~-~tp~v~STSY-~qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQER-WTPVVISTSY-TQYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhcc-CCceEEeccH-HHHHHHHHHhcCC
Confidence            46899999999999887 4555555355 6777888888887

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.29  E-value=0.14  Score=39.07  Aligned_cols=118  Identities=13%  Similarity=0.095  Sum_probs=70.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc----------cccee-cCCC-------CCcHHHHHH
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF----------VAKEI-FSSW-------SHKTDHFQR   65 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f----------~~~~~-~~~~-------kp~~~~~~~   65 (147)
                      +..|+.+++..|.++++++.|.|.+- ..+++.++.+.....-+          +.... .+-.       ......++.
T Consensus       139 lReg~~~ff~~L~~~~IP~~iFSAGi-gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~  217 (298)
T KOG3128|consen  139 LREGYEEFFEALQAHEIPLLIFSAGI-GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN  217 (298)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEecch-HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence            34688999999999999999999776 77777777765443211          11000 1111       112222333


Q ss_pred             HHHHcC--CCCCcEEEEeCCcccHHHHHHc-CCeEEEECCCCChHHHHHHHHHHHHhhccc
Q 032106           66 IHSRTG--VPFNSMLFFDDEDRNIDAVSKM-GVTGILVGNGVNLGALRQGLTKFSQNWNTS  123 (147)
Q Consensus        66 ~~~~~~--~~~~~~v~VgDs~~Di~~a~~~-Gi~~i~v~~~~~~~~~~~~l~~~~~~~~~~  123 (147)
                      ....+.  -....+++.||+..|+.+|--+ ++..++ .-|+..+..++.++++.+..++.
T Consensus       218 ~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iL-kig~l~d~vee~~~~ymd~ydIv  277 (298)
T KOG3128|consen  218 ESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHIL-KIGYLNDSVEEALEKYMDSYDIV  277 (298)
T ss_pred             hhHHHhhccCCceEEEeccccccchhhcCCcccccce-eeecccchHHHHHHHHHhhcceE
Confidence            333332  2457799999999999988654 332221 23333445555777887776543

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=95.28  E-value=0.054  Score=40.39  Aligned_cols=42  Identities=21%  Similarity=0.247  Sum_probs=35.5

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM   46 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~   46 (147)
                      ..|++.++|++|+++|++++++|++. ...+..+++.+|+..+
T Consensus        16 ~~~~~~~ai~~l~~~G~~~vi~TgR~-~~~~~~~~~~lg~~~~   57 (225)
T TIGR02461        16 EPGPAREALEELKDLGFPIVFVSSKT-RAEQEYYREELGVEPP   57 (225)
T ss_pred             CchHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCCc
Confidence            45789999999999999999999887 5556778899998653

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=95.15  E-value=0.16  Score=39.35  Aligned_cols=81  Identities=16%  Similarity=0.162  Sum_probs=62.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC-----------------------------
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS-----------------------------   54 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----------------------------   54 (147)
                      ..|.+.+.|..|++.|..+++=|.++ ++.+...++.++|.+||+.+-.-+                             
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~-~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv  221 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGN-REHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV  221 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence            35889999999999999999999888 677788999999999997740000                             


Q ss_pred             -C--CC-CcHHHHHHHHHHcCCCC-CcEEEEeCCcc
Q 032106           55 -S--WS-HKTDHFQRIHSRTGVPF-NSMLFFDDEDR   85 (147)
Q Consensus        55 -~--~k-p~~~~~~~~~~~~~~~~-~~~v~VgDs~~   85 (147)
                       .  .- ..|....+.+++.|+.. ..+-.|+|-..
T Consensus       222 ~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~  257 (297)
T PF05152_consen  222 TNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKS  257 (297)
T ss_pred             CcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcc
Confidence             0  01 24567778888999876 77888888765

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.14  E-value=0.064  Score=39.40  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=34.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      ..+.+.++|+.|+++|++++++||+. ...++.+++.+++.
T Consensus        17 ~~~~~~~~l~~l~~~gi~~~i~TgR~-~~~~~~~~~~l~~~   56 (221)
T TIGR02463        17 DWQPAAPWLTRLQEAGIPVILCTSKT-AAEVEYLQKALGLT   56 (221)
T ss_pred             CcHHHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCC
Confidence            34558899999999999999999888 67778899999986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=95.11  E-value=0.066  Score=43.30  Aligned_cols=119  Identities=17%  Similarity=0.174  Sum_probs=75.5

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh---cCcccccccceecC-------------------------------
Q 032106            9 KGILHALKDKGIDVAVASRSPSPDIANTFLEK---LNIKSMFVAKEIFS-------------------------------   54 (147)
Q Consensus         9 ~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~---~gl~~~f~~~~~~~-------------------------------   54 (147)
                      +-+|..+++.|.++.++||++ -......+..   .+...||+.+....                               
T Consensus       204 v~~l~~~r~sGKk~fl~Tns~-~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~  282 (424)
T KOG2469|consen  204 VPLLSMLRDSGKKTFLHTNSD-WDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL  282 (424)
T ss_pred             ccchHHHHhhccceEEeeccc-cchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence            338899999999999999887 4544554443   24556776532211                               


Q ss_pred             --CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHH-HHcCCeEEEECCCCChH--HHHHHHHHHHHhhccchhhHH
Q 032106           55 --SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAV-SKMGVTGILVGNGVNLG--ALRQGLTKFSQNWNTSQKNKQ  128 (147)
Q Consensus        55 --~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a-~~~Gi~~i~v~~~~~~~--~~~~~l~~~~~~~~~~~~~~~  128 (147)
                        ...+.......++..++....++++|||..+ ||--. +.-|+.+++|......+  .|...-++|.+..+.+..-++
T Consensus       283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~~e~~v~~~~ke~~~el~~~~~~laD  362 (424)
T KOG2469|consen  283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELEREDLVLLDSKEEFIELLNWSSKLAD  362 (424)
T ss_pred             hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhhhhhhhhccchHHHHHHhccchhhHh
Confidence              0233345566777778888899999999998 75444 55699999887654433  233333445555554433333

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=95.05  E-value=0.14  Score=40.28  Aligned_cols=87  Identities=10%  Similarity=0.137  Sum_probs=56.7

Q ss_pred             CCCchhHHHHHHHHHHC----CCeEEEEcCCC---ChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCC
Q 032106            2 PSLYPHAKGILHALKDK----GIDVAVASRSP---SPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPF   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~----g~~l~i~S~~~---~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~   74 (147)
                      ..++||+.++|+.|+.+    |+++.++||+.   ....++.+.+.+|+.  ++..+.+..   .. .....+++++   
T Consensus        15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~--~~~~~i~~s---~~-~~~~ll~~~~---   85 (321)
T TIGR01456        15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD--VSPLQVIQS---HS-PYKSLVNKYE---   85 (321)
T ss_pred             ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC--CCHHHHHhh---hH-HHHHHHHHcC---
Confidence            35699999999999998    99999999876   233444445778875  222122222   12 3344445543   


Q ss_pred             CcEEEEeCCcccHHHHHHcCCeEE
Q 032106           75 NSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      ..+++||.+- -.+.++.+|+..+
T Consensus        86 ~~v~viG~~~-~~~~l~~~G~~~v  108 (321)
T TIGR01456        86 KRILAVGTGS-VRGVAEGYGFQNV  108 (321)
T ss_pred             CceEEEeChH-HHHHHHHcCCccc
Confidence            2688888764 4666778887755

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PLN02423 phosphomannomutase

Probab=94.95  E-value=0.054  Score=40.94  Aligned_cols=54  Identities=19%  Similarity=0.244  Sum_probs=42.7

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC----CcccHHHHHHcCCeEEEECCCCChHHH
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD----EDRNIDAVSKMGVTGILVGNGVNLGAL  109 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD----s~~Di~~a~~~Gi~~i~v~~~~~~~~~  109 (147)
                      +.....-.|...++.++     ++++++.|||    +.||+++.+.-|+.++.|..+...-++
T Consensus       182 Di~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~  239 (245)
T PLN02423        182 DVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQ  239 (245)
T ss_pred             EEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHH
Confidence            45555667787887777     8899999999    799999999889999999765443333

>PRK10976 putative hydrolase; Provisional

Probab=94.83  E-value=0.08  Score=40.02  Aligned_cols=43  Identities=30%  Similarity=0.351  Sum_probs=36.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM   46 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~   46 (147)
                      .+-|...++|++|+++|++++++|++. ...+..+++.+++..+
T Consensus        19 ~is~~~~~ai~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~~   61 (266)
T PRK10976         19 TLSPYAKETLKLLTARGIHFVFATGRH-HVDVGQIRDNLEIKSY   61 (266)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHhcCCCCe
Confidence            356789999999999999999999888 5555778888998755

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=94.72  E-value=0.051  Score=42.37  Aligned_cols=33  Identities=24%  Similarity=0.605  Sum_probs=29.3

Q ss_pred             CCCCchhHHHHHHHHHHCC-CeEEEEcCCCChHH
Q 032106            1 MPSLYPHAKGILHALKDKG-IDVAVASRSPSPDI   33 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~~~   33 (147)
                      +|++||...++++.+++.| ++++|+||+..+.+
T Consensus        90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv  123 (296)
T COG0731          90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDV  123 (296)
T ss_pred             CcccccCHHHHHHHHHhcCCceEEEEeCCChHHH
Confidence            5999999999999999999 79999999985333

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=94.68  E-value=0.092  Score=39.63  Aligned_cols=43  Identities=14%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM   46 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~   46 (147)
                      .+.|...++|+.|+++|++++++|++. ...+...++.+++..+
T Consensus        20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~~   62 (272)
T PRK10530         20 TILPESLEALARAREAGYKVIIVTGRH-HVAIHPFYQALALDTP   62 (272)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHhcCCCCC
Confidence            467889999999999999999999888 5555778888988653

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=94.52  E-value=0.45  Score=37.18  Aligned_cols=41  Identities=17%  Similarity=0.320  Sum_probs=31.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHH---HHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTF---LEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~---l~~~gl~   44 (147)
                      .+.||+.++|+.|+..|..+.++||+..... +..   .+.+|+.
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr-~~y~kK~~~lG~~   81 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSR-EQYMKKFAKLGFN   81 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchH-HHHHHHHHHhCcc
Confidence            5789999999999999999999998874443 333   3345654

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=94.40  E-value=0.12  Score=46.96  Aligned_cols=36  Identities=17%  Similarity=0.124  Sum_probs=28.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLE   39 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~   39 (147)
                      ++-.||+++|+.|+++|++++++|+-. .+.+-.+.-
T Consensus       651 kLQdgVPetI~~L~~AGIKIWVLTGDK-~ETAiNIg~  686 (1151)
T KOG0206|consen  651 KLQDGVPETIAKLAQAGIKIWVLTGDK-QETAINIGY  686 (1151)
T ss_pred             hhccCchHHHHHHHHcCCEEEEEcCcH-HHHHHHHHH
Confidence            577899999999999999999999554 444434333

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=94.27  E-value=0.13  Score=38.71  Aligned_cols=42  Identities=19%  Similarity=0.264  Sum_probs=35.6

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM   46 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~   46 (147)
                      ..+.+.++|+.|+++|++++++|++. ...+..+++.+|+..+
T Consensus        17 ~~~~~~~~i~~l~~~g~~~~~~TgR~-~~~~~~~~~~~~~~~~   58 (256)
T TIGR01486        17 DWGPAKEVLERLQELGIPVIPCTSKT-AAEVEYLRKELGLEDP   58 (256)
T ss_pred             CchHHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCCCc
Confidence            45678999999999999999999887 6667888999998654

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK13762 tRNA-modifying enzyme; Provisional

Probab=93.98  E-value=0.21  Score=39.38  Aligned_cols=36  Identities=19%  Similarity=0.538  Sum_probs=30.9

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHH
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANT   36 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~   36 (147)
                      +|.++|.+.++++.+++.|+.++|.||+..++.++.
T Consensus       140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~e~l~~  175 (322)
T PRK13762        140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRPDVLEK  175 (322)
T ss_pred             cccchhhHHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence            488999999999999999999999999976554443

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.79  E-value=0.18  Score=39.41  Aligned_cols=43  Identities=21%  Similarity=0.283  Sum_probs=36.2

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF   47 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f   47 (147)
                      .++.+.++|+.|+++|++++++|++. ...+..+.+.+++..+|
T Consensus        19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt-~~ev~~l~~~Lgl~~p~   61 (302)
T PRK12702         19 SYGAARQALAALERRSIPLVLYSLRT-RAQLEHLCRQLRLEHPF   61 (302)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHhCCCCeE
Confidence            56778999999999999999999887 55567889999987644

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=93.50  E-value=0.2  Score=37.84  Aligned_cols=41  Identities=22%  Similarity=0.479  Sum_probs=34.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      .+-|...++|++|+++|++++++|++. ...+..+++.+++.
T Consensus        20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~   60 (270)
T PRK10513         20 TISPAVKQAIAAARAKGVNVVLTTGRP-YAGVHRYLKELHME   60 (270)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEecCCC-hHHHHHHHHHhCCC
Confidence            356789999999999999999999888 55557788888875

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.43  E-value=0.23  Score=37.86  Aligned_cols=40  Identities=15%  Similarity=0.190  Sum_probs=34.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      ..+.+.++|++|+++|++++++|++. ...+...++.+++.
T Consensus        25 i~~~~~~ai~~l~~~Gi~~viaTGR~-~~~i~~~~~~l~~~   64 (271)
T PRK03669         25 DWQPAAPWLTRLREAQVPVILCSSKT-AAEMLPLQQTLGLQ   64 (271)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEcCCC-HHHHHHHHHHhCCC
Confidence            34678899999999999999999888 56668889999985

>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []

Probab=93.13  E-value=0.32  Score=34.82  Aligned_cols=98  Identities=14%  Similarity=0.159  Sum_probs=56.8

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCccc
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRN   86 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~D   86 (147)
                      ++..+|..++..+-++++++..+.......+.+.+|+.=.+   ..+    .+++-++.+++++.-..- -++||+... 
T Consensus        65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~---~~~----~~~~e~~~~i~~~~~~G~-~viVGg~~~-  135 (176)
T PF06506_consen   65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKI---YPY----DSEEEIEAAIKQAKAEGV-DVIVGGGVV-  135 (176)
T ss_dssp             HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEE---EEE----SSHHHHHHHHHHHHHTT---EEEESHHH-
T ss_pred             HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEE---EEE----CCHHHHHHHHHHHHHcCC-cEEECCHHH-
Confidence            34555566666688999999655444456677777763111   111    234445555555422222 488999975 


Q ss_pred             HHHHHHcCCeEEEECCCCChHHHHHHHHH
Q 032106           87 IDAVSKMGVTGILVGNGVNLGALRQGLTK  115 (147)
Q Consensus        87 i~~a~~~Gi~~i~v~~~~~~~~~~~~l~~  115 (147)
                      ...|++.|+.++.+..+.  ++...++.+
T Consensus       136 ~~~A~~~gl~~v~i~sg~--esi~~Al~e  162 (176)
T PF06506_consen  136 CRLARKLGLPGVLIESGE--ESIRRALEE  162 (176)
T ss_dssp             HHHHHHTTSEEEESS--H--HHHHHHHHH
T ss_pred             HHHHHHcCCcEEEEEecH--HHHHHHHHH
Confidence            788999999999996643  344444443

Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.

>PTZ00174 phosphomannomutase; Provisional

Probab=93.00  E-value=0.44  Score=35.87  Aligned_cols=47  Identities=19%  Similarity=0.336  Sum_probs=39.6

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC----CcccHHHHHHcCCeEEEEC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD----EDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD----s~~Di~~a~~~Gi~~i~v~  101 (147)
                      +.....-.|...++.++++    +++++.|||    +.||+++-+.++...+.|.
T Consensus       181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~  231 (247)
T PTZ00174        181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK  231 (247)
T ss_pred             EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence            4555566788899999888    599999999    8999999998888778886

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=92.73  E-value=0.52  Score=41.76  Aligned_cols=92  Identities=13%  Similarity=0.130  Sum_probs=62.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc---ccc--------------------ceecCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM---FVA--------------------KEIFSSWSHK   59 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~---f~~--------------------~~~~~~~kp~   59 (147)
                      ...||++++++.++..|+.+-.+|+.+ ...++.+....|+..-   |-.                    +...+.+.|.
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDN-I~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~  725 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDN-INTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN  725 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCc-HHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence            357999999999999999999999555 8888999998988532   111                    0222223332


Q ss_pred             HH-HHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           60 TD-HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        60 ~~-~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      -. .+-+.+++.   .+=+.+-||+.+|-.+-+++.+...
T Consensus       726 DK~lLVk~L~~~---g~VVAVTGDGTNDaPALkeADVGlA  762 (1034)
T KOG0204|consen  726 DKHLLVKGLIKQ---GEVVAVTGDGTNDAPALKEADVGLA  762 (1034)
T ss_pred             hHHHHHHHHHhc---CcEEEEecCCCCCchhhhhcccchh
Confidence            22 222223322   2446677999999999999988644

>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR

Probab=92.68  E-value=2.2  Score=36.07  Aligned_cols=97  Identities=12%  Similarity=0.219  Sum_probs=61.1

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHH---HHcCCCCCcEEEEeCC
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIH---SRTGVPFNSMLFFDDE   83 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~---~~~~~~~~~~v~VgDs   83 (147)
                      ++..+|...++.+-+++|++-.+....++.+...+++.  +.. ..+.    ..+-....+   ++-|.    -++|||.
T Consensus        85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~-~~~~----~~~e~~~~~~~l~~~G~----~~viG~~  153 (526)
T TIGR02329        85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQ-RSYV----TEEDARSCVNDLRARGI----GAVVGAG  153 (526)
T ss_pred             hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEE-EEec----CHHHHHHHHHHHHHCCC----CEEECCh
Confidence            45666777778788999999666556667777777765  222 1111    222233333   33454    4778999


Q ss_pred             cccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHH
Q 032106           84 DRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ  118 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~  118 (147)
                      .. ...|+++|+..+++..+   +++..++..-.+
T Consensus       154 ~~-~~~A~~~gl~~ili~s~---esi~~a~~~A~~  184 (526)
T TIGR02329       154 LI-TDLAEQAGLHGVFLYSA---DSVRQAFDDALD  184 (526)
T ss_pred             HH-HHHHHHcCCceEEEecH---HHHHHHHHHHHH
Confidence            66 67789999999999774   444444444433

At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=92.56  E-value=0.46  Score=32.42  Aligned_cols=61  Identities=11%  Similarity=0.134  Sum_probs=38.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+.+++.++|+.|++.|+.++++|+++....    ....|.   +..        -.-......+.+.+++.++++
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~----~~n~~~---i~~--------~~~~~t~~wL~k~~ipYd~l~   84 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRTY----EGNVGK---INI--------HTLPIIILWLNQHNVPYDEIY   84 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchhh----hccccc---cch--------hhHHHHHHHHHHcCCCCceEE
Confidence            3668999999999999999999997763221    122222   111        123344455667777776655

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=92.41  E-value=1.2  Score=32.62  Aligned_cols=112  Identities=13%  Similarity=0.102  Sum_probs=65.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc--ccc--c-eec----------C--CCCCcHHHHHHH
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM--FVA--K-EIF----------S--SWSHKTDHFQRI   66 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~--f~~--~-~~~----------~--~~kp~~~~~~~~   66 (147)
                      .-|++.++|+.+.+. +.++|-|.+. ...++.++..+++...  +..  . +.+          +  ..|+-    ..+
T Consensus        46 kRP~l~eFL~~~~~~-feIvVwTAa~-~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL----~~l  119 (195)
T TIGR02245        46 MRPYLHEFLTSAYED-YDIVIWSATS-MKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPL----GVI  119 (195)
T ss_pred             eCCCHHHHHHHHHhC-CEEEEEecCC-HHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeec----HHh
Confidence            359999999999885 9999999776 7788899998876321  100  0 000          1  02221    112


Q ss_pred             HHHcCC--CCCcEEEEeCCcccHHHHHHcCCeEEEECC---CCChHHHHHHHHHHHHhhc
Q 032106           67 HSRTGV--PFNSMLFFDDEDRNIDAVSKMGVTGILVGN---GVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        67 ~~~~~~--~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~---~~~~~~~~~~l~~~~~~~~  121 (147)
                      -.++|.  +.+++|+|+|++.....--..|+..-....   +...+.....+..|.+..+
T Consensus       120 w~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~la  179 (195)
T TIGR02245       120 WALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKTIA  179 (195)
T ss_pred             hhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCcccHHHHHHHHHHHHHh
Confidence            224543  668999999998865543334554332221   1122323334556666654

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=92.11  E-value=0.56  Score=41.58  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=34.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+-|+++..|+.|++.++++..+|+-+ +..+-.+.+.+|+-.
T Consensus       675 PlK~Ds~~~I~el~~SSH~vvMITGDn-pLTAchVak~v~iv~  716 (1160)
T KOG0209|consen  675 PLKPDSKKTIKELNNSSHRVVMITGDN-PLTACHVAKEVGIVE  716 (1160)
T ss_pred             CCCccHHHHHHHHhccCceEEEEeCCC-ccchheehheeeeec
Confidence            356899999999999999999999544 887778888887643

>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional

Probab=90.93  E-value=4.5  Score=34.31  Aligned_cols=98  Identities=12%  Similarity=0.167  Sum_probs=62.0

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHH---HHcCCCCCcEEEEeCC
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIH---SRTGVPFNSMLFFDDE   83 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~---~~~~~~~~~~v~VgDs   83 (147)
                      ++..+|...++.+-+++|++-.+....++.+...+++.  +.. ..+    -..+-....+   +..|+    -++|||.
T Consensus        95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~-~~~----~~~~e~~~~v~~lk~~G~----~~vvG~~  163 (538)
T PRK15424         95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR--IEQ-RSY----VTEEDARGQINELKANGI----EAVVGAG  163 (538)
T ss_pred             HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEE-EEe----cCHHHHHHHHHHHHHCCC----CEEEcCc
Confidence            45667777788888999999665555666777777765  222 111    1222233333   34454    3778997


Q ss_pred             cccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHh
Q 032106           84 DRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQN  119 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~  119 (147)
                      .. ...|.++|+..+++..+   +++..++++-.+.
T Consensus       164 ~~-~~~A~~~g~~g~~~~s~---e~i~~a~~~A~~~  195 (538)
T PRK15424        164 LI-TDLAEEAGMTGIFIYSA---ATVRQAFEDALDM  195 (538)
T ss_pred             hH-HHHHHHhCCceEEecCH---HHHHHHHHHHHHH
Confidence            77 78899999999999753   5555555554443

>PLN02951 Molybderin biosynthesis protein CNX2

Probab=90.88  E-value=2.1  Score=34.43  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=30.6

Q ss_pred             CCCCchhHHHHHHHHHHC-CCe-EEEEcCCCCh-HHHHHHHHhcCccc
Q 032106            1 MPSLYPHAKGILHALKDK-GID-VAVASRSPSP-DIANTFLEKLNIKS   45 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~-g~~-l~i~S~~~~~-~~~~~~l~~~gl~~   45 (147)
                      +|.+.|++.++++.+++. |+. +.|.||+..- ..+ ..+...|++.
T Consensus       116 EPllr~dl~eli~~l~~~~gi~~i~itTNG~lL~~~~-~~L~~aGld~  162 (373)
T PLN02951        116 EPTLRKDIEDICLQLSSLKGLKTLAMTTNGITLSRKL-PRLKEAGLTS  162 (373)
T ss_pred             CCcchhhHHHHHHHHHhcCCCceEEEeeCcchHHHHH-HHHHhCCCCe
Confidence            488899999999999986 874 8889988521 222 2344456654

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=90.34  E-value=0.92  Score=32.70  Aligned_cols=39  Identities=21%  Similarity=0.366  Sum_probs=32.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN   42 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g   42 (147)
                      .+-|.+.++|+.|++.|++++++|++. ...+..+++.++
T Consensus        17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~-~~~~~~~~~~~~   55 (204)
T TIGR01484        17 ELSPETIEALERLREAGVKVVLVTGRS-LAEIKELLKQLP   55 (204)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHhCC
Confidence            466899999999999999999999887 566677777644

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>CHL00162 thiG thiamin biosynthesis protein G; Validated

Probab=90.15  E-value=5.9  Score=30.42  Aligned_cols=96  Identities=20%  Similarity=0.275  Sum_probs=70.7

Q ss_pred             CCchhHHHHHH---HHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC--CCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILH---ALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS--SWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~---~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~--~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++|+..++|+   .|-+.|+.|...++.+ +..+++ |+..|-.-.+.....++  ..-.++..++.+++...+    -
T Consensus       118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D-~v~a~r-Led~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~v----p  191 (267)
T CHL00162        118 YLLPDPIGTLKAAEFLVKKGFTVLPYINAD-PMLAKH-LEDIGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKI----P  191 (267)
T ss_pred             ccCCChHHHHHHHHHHHHCCCEEeecCCCC-HHHHHH-HHHcCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCC----c
Confidence            56777777775   5668899999999666 777644 77788766555543333  345688899999887654    4


Q ss_pred             EEEeCCc---ccHHHHHHcCCeEEEECCCC
Q 032106           78 LFFDDED---RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        78 v~VgDs~---~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |+||-+.   .|+..|-++|...+++..+.
T Consensus       192 VivdAGIgt~sDa~~AmElGaDgVL~nSaI  221 (267)
T CHL00162        192 VIIDAGIGTPSEASQAMELGASGVLLNTAV  221 (267)
T ss_pred             EEEeCCcCCHHHHHHHHHcCCCEEeeccee
Confidence            7777764   48999999999999998764

>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH

Probab=90.03  E-value=3.1  Score=32.66  Aligned_cols=30  Identities=20%  Similarity=0.203  Sum_probs=27.4

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCC
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPS   30 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~   30 (147)
                      +|-+.|++.++++.++++|..+.++||+..
T Consensus        82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG~l  111 (318)
T TIGR03470        82 EPLLHPEIDEIVRGLVARKKFVYLCTNALL  111 (318)
T ss_pred             cccccccHHHHHHHHHHcCCeEEEecCcee
Confidence            588999999999999999999999999863

The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH

>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences

Probab=89.66  E-value=6.6  Score=29.84  Aligned_cols=107  Identities=18%  Similarity=0.251  Sum_probs=68.2

Q ss_pred             CCchhHHHHHH---HHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC--CCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILH---ALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS--SWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~---~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~--~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++|+..++|+   .|-+.|+.|.-.++.+ +..+++ |+..|-.-.+.....++  ..-.++..++.++++.+++    
T Consensus       104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D-~v~akr-L~d~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~vP----  177 (247)
T PF05690_consen  104 TLLPDPIETLKAAEILVKEGFVVLPYCTDD-PVLAKR-LEDAGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADVP----  177 (247)
T ss_dssp             T--B-HHHHHHHHHHHHHTT-EEEEEE-S--HHHHHH-HHHTT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSSS----
T ss_pred             CcCCChhHHHHHHHHHHHCCCEEeecCCCC-HHHHHH-HHHCCCCEEEecccccccCcCCCCHHHHHHHHHhcCCc----
Confidence            56788877775   5668899999999665 777644 77788766665543332  2446789999999999774    


Q ss_pred             EEEeCC---cccHHHHHHcCCeEEEECCC----CChHHHHHHHHH
Q 032106           78 LFFDDE---DRNIDAVSKMGVTGILVGNG----VNLGALRQGLTK  115 (147)
Q Consensus        78 v~VgDs---~~Di~~a~~~Gi~~i~v~~~----~~~~~~~~~l~~  115 (147)
                      |+||-+   +.|...|-++|...++++..    .++-.+.+++..
T Consensus       178 vIvDAGiG~pSdaa~AMElG~daVLvNTAiA~A~dPv~MA~Af~~  222 (247)
T PF05690_consen  178 VIVDAGIGTPSDAAQAMELGADAVLVNTAIAKAKDPVAMARAFKL  222 (247)
T ss_dssp             BEEES---SHHHHHHHHHTT-SEEEESHHHHTSSSHHHHHHHHHH
T ss_pred             EEEeCCCCCHHHHHHHHHcCCceeehhhHHhccCCHHHHHHHHHH
Confidence            667765   45888899999999999853    334445444443

ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=89.53  E-value=2.6  Score=29.87  Aligned_cols=91  Identities=15%  Similarity=0.262  Sum_probs=55.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC--hHHHHHHHHhc-----Cccc---ccc------cc--eecCCCCCcHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS--PDIANTFLEKL-----NIKS---MFV------AK--EIFSSWSHKTDHFQ   64 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~--~~~~~~~l~~~-----gl~~---~f~------~~--~~~~~~kp~~~~~~   64 (147)
                      ...||+.++...++++|+++.-+|+++.  ....+..|...     +|..   +|.      ..  +.+   .++++.|+
T Consensus        27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi---~~~p~~fK  103 (157)
T PF08235_consen   27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVI---SKDPEEFK  103 (157)
T ss_pred             hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhcccc---ccChHHHH
Confidence            3579999999999999999999997761  22333455555     3322   111      10  121   23444443


Q ss_pred             -----HHHHHcC-CCCCcEEEEeCCcccHHHHHHcCCe
Q 032106           65 -----RIHSRTG-VPFNSMLFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        65 -----~~~~~~~-~~~~~~v~VgDs~~Di~~a~~~Gi~   96 (147)
                           .+...+. ....=..-+|++..|+.+=+++|+.
T Consensus       104 ~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  104 IACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             HHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence                 3333332 1112245589999999999999994

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=89.25  E-value=2.1  Score=34.05  Aligned_cols=82  Identities=20%  Similarity=0.186  Sum_probs=51.8

Q ss_pred             CCchhHHHHHHHHHHCC-CeEEEEcCCCChHHHHHHHHhcCcccccccc-------------eecCCCCCcHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKG-IDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------------EIFSSWSHKTDHFQRIHS   68 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------------~~~~~~kp~~~~~~~~~~   68 (147)
                      +++||+..+.+.|.+.| .+++-+||++ -. ....|+++==.+-|..+             -.......|...+..+++
T Consensus       196 ~~ipGV~~~yr~l~~~~~apvfYvSnSP-w~-~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~  273 (373)
T COG4850         196 QVIPGVSAWYRALTNLGDAPVFYVSNSP-WQ-LFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILR  273 (373)
T ss_pred             CCCCCHHHHHHHHHhcCCCCeEEecCCh-hH-hHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHH
Confidence            68999999999999998 8999999886 23 23444443111112111             011113345666676777


Q ss_pred             HcCCCCCcEEEEeCCc-ccHH
Q 032106           69 RTGVPFNSMLFFDDED-RNID   88 (147)
Q Consensus        69 ~~~~~~~~~v~VgDs~-~Di~   88 (147)
                      +++-  ...+.|||+- .|.+
T Consensus       274 ~~p~--~kfvLVGDsGE~Dpe  292 (373)
T COG4850         274 RYPD--RKFVLVGDSGEHDPE  292 (373)
T ss_pred             hCCC--ceEEEecCCCCcCHH
Confidence            7653  5689999984 4754

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=88.83  E-value=2.2  Score=38.13  Aligned_cols=39  Identities=18%  Similarity=0.138  Sum_probs=32.6

Q ss_pred             CCCcHHHHHHHHH---HcCCCCCcEEEEeCCcccHHHHHHcC
Q 032106           56 WSHKTDHFQRIHS---RTGVPFNSMLFFDDEDRNIDAVSKMG   94 (147)
Q Consensus        56 ~kp~~~~~~~~~~---~~~~~~~~~v~VgDs~~Di~~a~~~G   94 (147)
                      .-.|....+.+++   .+|..++.+++|||..+|..+.+.++
T Consensus       760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence            5567888888875   46889999999999999999888775

>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein

Probab=88.75  E-value=1.3  Score=31.80  Aligned_cols=84  Identities=13%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      +|.+.|.+.++++.+++.|+.+.+.||+.....+..+++ .|+..++..  .+..   ..+.+..+.   |......   
T Consensus        72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~~l~~-~g~~~~v~i--sl~~---~~~~~~~~~---g~~~~~~---  139 (191)
T TIGR02495        72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLEELLE-EGLVDYVAM--DVKA---PPEKYPELY---GLEKNGS---  139 (191)
T ss_pred             cccCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHHHHHh-cCCCcEEEE--eccC---ChHHHHHHH---CCCCchH---
Confidence            478889999999999999999999999975554444333 453233221  1111   233444433   3221100   


Q ss_pred             eCCcccHHHHHHcCCe
Q 032106           81 DDEDRNIDAVSKMGVT   96 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~   96 (147)
                      .+....++.+++.|+.
T Consensus       140 ~~~~~~i~~l~~~gi~  155 (191)
T TIGR02495       140 NNILKSLEILLRSGIP  155 (191)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            2334567777777764

This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.

>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional

Probab=88.71  E-value=8.4  Score=30.60  Aligned_cols=97  Identities=19%  Similarity=0.231  Sum_probs=67.3

Q ss_pred             CCCchhHHHHHHHHHHC---CCeEEEEcCCCChHHHHHHHHhcCcccccccceecCC--CCCcHHHHHHHHHHcCCCCCc
Q 032106            2 PSLYPHAKGILHALKDK---GIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS--WSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~---g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      +.++|+..++++..+..   |+.+.++.+.+ +..++. +..+|-.-.....+.++.  +-.+++.++.+.+...    -
T Consensus       177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d-~~~a~~-l~~~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~----v  250 (326)
T PRK11840        177 KTLYPDMVETLKATEILVKEGFQVMVYCSDD-PIAAKR-LEDAGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGAT----V  250 (326)
T ss_pred             CCcccCHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHH-HHhcCCEEEeeccccccCCCCCCCHHHHHHHHHcCC----C
Confidence            46788888998888877   99995655354 666655 555665322232222222  3348999999988744    3


Q ss_pred             EEEEeCCcc---cHHHHHHcCCeEEEECCCC
Q 032106           77 MLFFDDEDR---NIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        77 ~v~VgDs~~---Di~~a~~~Gi~~i~v~~~~  104 (147)
                      -|+||-+..   |+..|-++|...+++..+.
T Consensus       251 pVivdAGIg~~sda~~AmelGadgVL~nSaI  281 (326)
T PRK11840        251 PVLVDAGVGTASDAAVAMELGCDGVLMNTAI  281 (326)
T ss_pred             cEEEeCCCCCHHHHHHHHHcCCCEEEEccee
Confidence            588887754   8999999999999998764

>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism

Probab=88.65  E-value=9.1  Score=29.21  Aligned_cols=97  Identities=18%  Similarity=0.224  Sum_probs=66.5

Q ss_pred             CCchhHHHHHHHHHHC---CCeEE-EEcCCCChHHHHHHHHhcCcccccccceecCC--CCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDK---GIDVA-VASRSPSPDIANTFLEKLNIKSMFVAKEIFSS--WSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~---g~~l~-i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++|+..++++..+..   |+.+. +++ .+ ...++. +..+|-.-.....+.++.  .-.+++.++.+.+..++    
T Consensus       104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~-dd-~~~ar~-l~~~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~v----  176 (248)
T cd04728         104 TLLPDPIETLKAAEILVKEGFTVLPYCT-DD-PVLAKR-LEDAGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADV----  176 (248)
T ss_pred             ccccCHHHHHHHHHHHHHCCCEEEEEeC-CC-HHHHHH-HHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCC----
Confidence            5789999999888877   99999 555 44 666655 556676544332222222  33458888877776443    


Q ss_pred             EEEEeCCc---ccHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDED---RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs~---~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      .|++|=+.   .|+..|.++|...++++.+...
T Consensus       177 pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~  209 (248)
T cd04728         177 PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK  209 (248)
T ss_pred             cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence            47777654   4899999999999999987543

ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).

>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal

Probab=88.46  E-value=3.1  Score=32.11  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             CCCCchhHHHHHHHHHHCCC-eEEEEcCCCChHHHHHHHHhcCcc
Q 032106            1 MPSLYPHAKGILHALKDKGI-DVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~-~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      +|.+.+++.++++.+++.|+ .+.+.||+......-..+...|+.
T Consensus        66 EPll~~~l~~iv~~l~~~g~~~v~i~TNG~ll~~~~~~l~~~g~~  110 (302)
T TIGR02668        66 EPLLRKDLIEIIRRIKDYGIKDVSMTTNGILLEKLAKKLKEAGLD  110 (302)
T ss_pred             ccccccCHHHHHHHHHhCCCceEEEEcCchHHHHHHHHHHHCCCC
Confidence            48889999999999999998 899999885321111234455654

This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=88.25  E-value=0.93  Score=39.59  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=35.6

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcC--CeEEEECC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG--VTGILVGN  102 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~G--i~~i~v~~  102 (147)
                      .-.|......+++  ++.++.++++||+.+|+.+.+.++  ..++.++.
T Consensus       655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~  701 (726)
T PRK14501        655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP  701 (726)
T ss_pred             CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC
Confidence            4567888888887  778899999999999999999874  24455554

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=87.70  E-value=4.7  Score=29.15  Aligned_cols=97  Identities=22%  Similarity=0.307  Sum_probs=57.3

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHHHH---HHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIANT---FLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++...|..++++ .+++-+|... ....+.   .+.+-.+  .++.++.++.. .|    -.+.+...++    +|+.|
T Consensus        75 q~v~~~L~~~~e~-~~L~~itar~-~dl~~iT~~~l~~q~i--h~~~l~i~g~h-~K----V~~vrth~id----lf~ed  141 (194)
T COG5663          75 QLVKQVLPSLKEE-HRLIYITARK-ADLTRITYAWLFIQNI--HYDHLEIVGLH-HK----VEAVRTHNID----LFFED  141 (194)
T ss_pred             HHHHHHhHHHHhh-ceeeeeehhh-HHHHHHHHHHHHHhcc--chhhhhhhccc-cc----chhhHhhccC----ccccc
Confidence            4677788888887 5566666343 333222   2222222  24544444431 01    2344555654    78899


Q ss_pred             Cccc-HHHHHHcCCeEEEECCCCChHHHHHHHHH
Q 032106           83 EDRN-IDAVSKMGVTGILVGNGVNLGALRQGLTK  115 (147)
Q Consensus        83 s~~D-i~~a~~~Gi~~i~v~~~~~~~~~~~~l~~  115 (147)
                      +..+ ++.|+.+|++++.+...++..-....+.+
T Consensus       142 ~~~na~~iAk~~~~~vilins~ynRkp~~~niiR  175 (194)
T COG5663         142 SHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIR  175 (194)
T ss_pred             cCchHHHHHHhcCCcEEEecCcccccchHHHHHH
Confidence            9774 78888899999999988775544444433

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=87.68  E-value=1.2  Score=38.94  Aligned_cols=39  Identities=18%  Similarity=0.211  Sum_probs=27.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN   42 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g   42 (147)
                      ++..+++..|+.|+++|++++.+|+-. -+.+..+.+..+
T Consensus       658 kLQ~dVk~tLElLRNAgikiWMLTGDK-lETA~ciAkSs~  696 (1051)
T KOG0210|consen  658 KLQDDVKPTLELLRNAGIKIWMLTGDK-LETAICIAKSSR  696 (1051)
T ss_pred             HHhhhhHhHHHHHhhcCcEEEEEcCcc-hhheeeeehhcc
Confidence            456788999999999999999999544 443333333333

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=87.49  E-value=1.5  Score=38.21  Aligned_cols=43  Identities=28%  Similarity=0.365  Sum_probs=35.2

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF   47 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f   47 (147)
                      ..+.+.++|+.|+++|++++++|++. ...+..+++.+++..+|
T Consensus       434 i~~~t~eAL~~L~ekGI~~VIATGRs-~~~i~~l~~~Lgl~~~~  476 (694)
T PRK14502        434 SYSTALDALRLLKDKELPLVFCSAKT-MGEQDLYRNELGIKDPF  476 (694)
T ss_pred             cCHHHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHcCCCCeE
Confidence            45678999999999999999999887 55667888999875443

>PLN02887 hydrolase family protein

Probab=87.44  E-value=1.4  Score=37.70  Aligned_cols=41  Identities=12%  Similarity=0.233  Sum_probs=34.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      ++-+...++|+.|+++|+.++|+|++. ...+...++.+++.
T Consensus       325 ~Is~~t~eAI~kl~ekGi~~vIATGR~-~~~i~~~l~~L~l~  365 (580)
T PLN02887        325 QISETNAKALKEALSRGVKVVIATGKA-RPAVIDILKMVDLA  365 (580)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHhCcc
Confidence            356788999999999999999999887 55557788888764

>PLN02580 trehalose-phosphatase

Probab=87.30  E-value=3.6  Score=33.44  Aligned_cols=37  Identities=14%  Similarity=0.144  Sum_probs=30.5

Q ss_pred             CCCcHHHHHHHHHHcCCCCCc---EEEEeCCcccHHHHHH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNS---MLFFDDEDRNIDAVSK   92 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~---~v~VgDs~~Di~~a~~   92 (147)
                      .-.|....+.+++.+++...+   .+||||..+|..+.+.
T Consensus       299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~  338 (384)
T PLN02580        299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV  338 (384)
T ss_pred             CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence            346788899999999987653   3899999999998886

>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional

Probab=86.95  E-value=4.4  Score=31.89  Aligned_cols=45  Identities=9%  Similarity=0.066  Sum_probs=31.2

Q ss_pred             CCCCchhHHHHHHHHHHCCC--eEEEEcCCCChHHHHHHHHhcCccc
Q 032106            1 MPSLYPHAKGILHALKDKGI--DVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~--~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +|-+.+++.++++.+++.+.  .+.+.||+..-...-..+...|+..
T Consensus        71 EPllr~dl~~li~~i~~~~~l~~i~itTNG~ll~~~~~~L~~aGl~~  117 (329)
T PRK13361         71 EPLVRRGCDQLVARLGKLPGLEELSLTTNGSRLARFAAELADAGLKR  117 (329)
T ss_pred             CCCccccHHHHHHHHHhCCCCceEEEEeChhHHHHHHHHHHHcCCCe
Confidence            58889999999999998764  7899998853221123345566653

>PRK10076 pyruvate formate lyase II activase; Provisional

Probab=86.41  E-value=1.5  Score=32.56  Aligned_cols=31  Identities=19%  Similarity=0.294  Sum_probs=26.7

Q ss_pred             CCCCchh-HHHHHHHHHHCCCeEEEEcCCCCh
Q 032106            1 MPSLYPH-AKGILHALKDKGIDVAVASRSPSP   31 (147)
Q Consensus         1 ~p~~~pg-v~~~L~~L~~~g~~l~i~S~~~~~   31 (147)
                      +|.+.++ +.++++.+++.|+.+++.||+..+
T Consensus        48 EPllq~~fl~~l~~~~k~~gi~~~leTnG~~~   79 (213)
T PRK10076         48 EVLMQAEFATRFLQRLRLWGVSCAIETAGDAP   79 (213)
T ss_pred             hHHcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence            4778888 689999999999999999998643

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=86.21  E-value=1.1  Score=36.26  Aligned_cols=95  Identities=14%  Similarity=0.171  Sum_probs=61.9

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHH-----------HHHHHHhcCcccc-cccceecCCCCCcHHHHHHHHHHcC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDI-----------ANTFLEKLNIKSM-FVAKEIFSSWSHKTDHFQRIHSRTG   71 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~-----------~~~~l~~~gl~~~-f~~~~~~~~~kp~~~~~~~~~~~~~   71 (147)
                      ++|.+..=|+.|...|+.++|.||.+....           ++.+...+++.-. +..+..-..+||...+++...+.++
T Consensus       105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~n  184 (422)
T KOG2134|consen  105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLEN  184 (422)
T ss_pred             eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhh
Confidence            678889999999999999999998763221           1223333444311 1111222348999999999987654


Q ss_pred             ----CCCCcEEEEeCCc---------------ccHHHHHHcCCeEE
Q 032106           72 ----VPFNSMLFFDDED---------------RNIDAVSKMGVTGI   98 (147)
Q Consensus        72 ----~~~~~~v~VgDs~---------------~Di~~a~~~Gi~~i   98 (147)
                          +......||||..               .|+..|.++|+.+.
T Consensus       185 d~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~  230 (422)
T KOG2134|consen  185 DSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK  230 (422)
T ss_pred             ccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence                3345566888753               26777777777654

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=86.10  E-value=1.4  Score=33.67  Aligned_cols=40  Identities=10%  Similarity=-0.027  Sum_probs=31.4

Q ss_pred             CCchhHHHHHHHHHH-CCCeEEEEcCCCChHHHHHHHHhcCc
Q 032106            3 SLYPHAKGILHALKD-KGIDVAVASRSPSPDIANTFLEKLNI   43 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~-~g~~l~i~S~~~~~~~~~~~l~~~gl   43 (147)
                      .+.|.+.++|+.|.+ .|+.++|+|++. ...+..++..+++
T Consensus        36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~-~~~~~~~~~~~~~   76 (266)
T PRK10187         36 VVPDNILQGLQLLATANDGALALISGRS-MVELDALAKPYRF   76 (266)
T ss_pred             cCCHHHHHHHHHHHhCCCCcEEEEeCCC-HHHHHHhcCcccc
Confidence            456889999999998 799999999887 5555666665553

>PTZ00174 phosphomannomutase; Provisional

Probab=85.88  E-value=2  Score=32.27  Aligned_cols=36  Identities=25%  Similarity=0.260  Sum_probs=27.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLE   39 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~   39 (147)
                      ++-|...++|+.|+++|+.++++|+++ ...+...+.
T Consensus        22 ~is~~~~~ai~~l~~~Gi~~viaTGR~-~~~i~~~l~   57 (247)
T PTZ00174         22 PITQEMKDTLAKLKSKGFKIGVVGGSD-YPKIKEQLG   57 (247)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHh
Confidence            456788999999999999999999887 333344443

>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily

Probab=85.37  E-value=12  Score=27.25  Aligned_cols=99  Identities=10%  Similarity=0.090  Sum_probs=57.7

Q ss_pred             HHHHHHHCCCeEEEEcCC-----C-------ChHHHHHHHHhcCcccccccceecCCCCC-cHHHHHHHHHHcCCCCCcE
Q 032106           11 ILHALKDKGIDVAVASRS-----P-------SPDIANTFLEKLNIKSMFVAKEIFSSWSH-KTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~-----~-------~~~~~~~~l~~~gl~~~f~~~~~~~~~kp-~~~~~~~~~~~~~~~~~~~   77 (147)
                      ++..+++.|+.+..++..     .       ....++.+.+.+|+..+.-.+   ...++ ....+...++++...--+.
T Consensus        15 al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~---~~~~e~~~~~l~~~l~~~~~~g~~~   91 (194)
T cd01994          15 ALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEI---SGEEEDEVEDLKELLRKLKEEGVDA   91 (194)
T ss_pred             HHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeC---CCCchHHHHHHHHHHHHHHHcCCCE
Confidence            445566678765444411     0       234667788889986442221   11111 1123333344433223568


Q ss_pred             EEEeCCcccH------HHHHHcCCeEEEECCCCChHHHHHH
Q 032106           78 LFFDDEDRNI------DAVSKMGVTGILVGNGVNLGALRQG  112 (147)
Q Consensus        78 v~VgDs~~Di------~~a~~~Gi~~i~v~~~~~~~~~~~~  112 (147)
                      +..||...|.      ..+.++|+.++.-.|+.+.+++.+.
T Consensus        92 vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~~~~~~ll~e  132 (194)
T cd01994          92 VVFGAILSEYQRTRVERVCERLGLEPLAPLWGRDQEELLRE  132 (194)
T ss_pred             EEECccccHHHHHHHHHHHHHcCCEEEecccCCCHHHHHHH
Confidence            9999997764      4577799999999999887765543

Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=84.92  E-value=7.2  Score=30.00  Aligned_cols=91  Identities=21%  Similarity=0.272  Sum_probs=59.2

Q ss_pred             CCCchhHHHHHHHHHHC------CCeEEEEcCCCChHHHHHH---HHhcCcccccccceecCCCCCcHHHHHHHHHHcCC
Q 032106            2 PSLYPHAKGILHALKDK------GIDVAVASRSPSPDIANTF---LEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGV   72 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~------g~~l~i~S~~~~~~~~~~~---l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~   72 (147)
                      +.|+-.....|.+|++.      -++++|||..+.+.. +++   |+.-|+.  ++.. .+=..-+|..++..+    + 
T Consensus       163 ~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah-~RvI~TLr~Wgv~--vDEa-fFLgG~~K~~vL~~~----~-  233 (264)
T PF06189_consen  163 EGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAH-ERVIRTLRSWGVR--VDEA-FFLGGLPKGPVLKAF----R-  233 (264)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchh-HHHHHHHHHcCCc--HhHH-HHhCCCchhHHHHhh----C-
Confidence            45666777777777755      478999997664544 443   3444543  2221 111234566555444    2 


Q ss_pred             CCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           73 PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        73 ~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                         -=+|++|....++.|. .++.+..|++|..
T Consensus       234 ---phIFFDDQ~~H~~~a~-~~vps~hVP~gv~  262 (264)
T PF06189_consen  234 ---PHIFFDDQDGHLESAS-KVVPSGHVPYGVA  262 (264)
T ss_pred             ---CCEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence               2389999999999998 7999999988754

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=84.70  E-value=2  Score=32.18  Aligned_cols=40  Identities=5%  Similarity=0.074  Sum_probs=33.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      ..|.+.++++.++++|+.++++|++. ...++.+++.+++.
T Consensus        22 ~~~~~~~~i~~~~~~gi~fv~aTGR~-~~~~~~~~~~~~~~   61 (249)
T TIGR01485        22 ALLRLNALLEDHRGEDSLLVYSTGRS-PHSYKELQKQKPLL   61 (249)
T ss_pred             HHHHHHHHHHHhhccCceEEEEcCCC-HHHHHHHHhcCCCC
Confidence            45788999999999999999999887 66667777777764

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein

Probab=84.63  E-value=14  Score=27.38  Aligned_cols=101  Identities=11%  Similarity=0.075  Sum_probs=57.7

Q ss_pred             HHHHHHHCCCeE-EEEc-----------CCCChHHHHHHHHhcCcccccccceecCCCCC-cHHHHHHHHHHcCCCCCcE
Q 032106           11 ILHALKDKGIDV-AVAS-----------RSPSPDIANTFLEKLNIKSMFVAKEIFSSWSH-KTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus        11 ~L~~L~~~g~~l-~i~S-----------~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp-~~~~~~~~~~~~~~~~~~~   77 (147)
                      ++..+++.|+.+ +++|           ...+...++.+.+.+|+..+.-.   +...++ ..+.+..++.++.-..-+.
T Consensus        13 al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~---~~~~~~~~~~~l~~~l~~~~~~g~~~   89 (218)
T TIGR03679        13 ALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIE---TSGEKEKEVEDLKGALKELKREGVEG   89 (218)
T ss_pred             HHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEE---CCCCChHHHHHHHHHHHHHHHcCCCE
Confidence            445666788877 3545           11124566778888998643221   111011 1122333333331123568


Q ss_pred             EEEeCCcccH------HHHHHcCCeEEEECCCCChHHHHHHHH
Q 032106           78 LFFDDEDRNI------DAVSKMGVTGILVGNGVNLGALRQGLT  114 (147)
Q Consensus        78 v~VgDs~~Di------~~a~~~Gi~~i~v~~~~~~~~~~~~l~  114 (147)
                      +..||...|.      ..+...|+..+.-.|+.+..++.+.+.
T Consensus        90 vv~G~i~sd~~~~~~e~v~~~~gl~~~~PLw~~~~~el~~~~~  132 (218)
T TIGR03679        90 IVTGAIASRYQKSRIERICEELGLKVFAPLWGRDQEEYLRELV  132 (218)
T ss_pred             EEECCcccHhHHHHHHHHHHhCCCeEEeehhcCCHHHHHHHHH
Confidence            9999987764      556778999888889888776554333

This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.

>PRK00208 thiG thiazole synthase; Reviewed

Probab=84.38  E-value=16  Score=27.90  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=65.8

Q ss_pred             CCchhHHHHHHHHHHC---CCeEE-EEcCCCChHHHHHHHHhcCcccccccceecCC--CCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDK---GIDVA-VASRSPSPDIANTFLEKLNIKSMFVAKEIFSS--WSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~---g~~l~-i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++|+..++++..+..   |+.+. +|+ .+ ...++. +..+|-.-.....+.++.  .-.+++.++.+.+..++    
T Consensus       104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~-~d-~~~ak~-l~~~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~v----  176 (250)
T PRK00208        104 TLLPDPIETLKAAEILVKEGFVVLPYCT-DD-PVLAKR-LEEAGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADV----  176 (250)
T ss_pred             CCCcCHHHHHHHHHHHHHCCCEEEEEeC-CC-HHHHHH-HHHcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCC----
Confidence            4688888888888777   99999 666 44 566555 666676544332222222  33357777777776443    


Q ss_pred             EEEEeCCcc---cHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDEDR---NIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs~~---Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      .|++|=+..   |+..|.++|...++++.+...
T Consensus       177 pVIveaGI~tpeda~~AmelGAdgVlV~SAItk  209 (250)
T PRK00208        177 PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV  209 (250)
T ss_pred             eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence            477776654   899999999999999987543

>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]

Probab=84.10  E-value=12  Score=29.19  Aligned_cols=104  Identities=18%  Similarity=0.277  Sum_probs=59.0

Q ss_pred             chhHHHHHHHHHHCCCe---------EEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            5 YPHAKGILHALKDKGID---------VAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~---------l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      .+++.+.++.|+.+ ++         ++-+| .++...++.+....+   ++-.  ..+....++.-+.++.++.|. + 
T Consensus       170 ~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT-~nRQ~Avk~la~~~D---l~iV--VG~~nSSNs~rL~eiA~~~g~-~-  240 (294)
T COG0761         170 VDDTAEIVAALKER-FPKIEVPPFNDICYAT-QNRQDAVKELAPEVD---LVIV--VGSKNSSNSNRLAEIAKRHGK-P-  240 (294)
T ss_pred             HHHHHHHHHHHHHh-CccccCCcccccchhh-hhHHHHHHHHhhcCC---EEEE--ECCCCCccHHHHHHHHHHhCC-C-
Confidence            45667777777766 55         55555 332333344333322   2222  222233456666777777786 3 


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCCChHHH--HHHHHHHHHh
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGAL--RQGLTKFSQN  119 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~--~~~l~~~~~~  119 (147)
                       ++.| |+..||....=.|..+++++-|...+++  ...+..+++.
T Consensus       241 -aylI-d~~~ei~~~w~~~~~~VGvTAGAStPd~lV~~Vi~~l~~~  284 (294)
T COG0761         241 -AYLI-DDAEEIDPEWLKGVKTVGVTAGASTPDWLVQEVIAKLREL  284 (294)
T ss_pred             -eEEe-CChHhCCHHHhcCccEEEEecCCCCCHHHHHHHHHHHHHh
Confidence             3444 5677888888888899999888654432  3444444443

>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE

Probab=83.78  E-value=1.2  Score=33.46  Aligned_cols=30  Identities=20%  Similarity=0.259  Sum_probs=27.3

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCC
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPS   30 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~   30 (147)
                      +|-+.++..++++.|++.|+++.|-||+..
T Consensus        82 EPll~~~l~~li~~l~~~g~~v~leTNGtl  111 (238)
T TIGR03365        82 NPALQKPLGELIDLGKAKGYRFALETQGSV  111 (238)
T ss_pred             chhhhHhHHHHHHHHHHCCCCEEEECCCCC
Confidence            477889999999999999999999999974

This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.

>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function

Probab=83.03  E-value=0.58  Score=27.89  Aligned_cols=26  Identities=15%  Similarity=0.424  Sum_probs=16.0

Q ss_pred             HHHHHHHcCCCCCcEEEEeCCcccHHHHHH
Q 032106           63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSK   92 (147)
Q Consensus        63 ~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~   92 (147)
                      .++.++++|+    ++++||..+|++.+..
T Consensus         7 VqQLLK~fG~----~IY~gdr~~DielM~~   32 (62)
T PF06014_consen    7 VQQLLKKFGI----IIYVGDRLWDIELMEI   32 (62)
T ss_dssp             HHHHHHTTS---------S-HHHHHHHHHH
T ss_pred             HHHHHHHCCE----EEEeCChHHHHHHHHH
Confidence            4678888888    8999999999987653

; PDB: 2NN4_A.

>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional

Probab=81.92  E-value=3.3  Score=30.96  Aligned_cols=39  Identities=15%  Similarity=0.247  Sum_probs=29.4

Q ss_pred             CCCCchhH-HHHHHHHHHCCCeEEEEcCCCC---hHHHHHHHH
Q 032106            1 MPSLYPHA-KGILHALKDKGIDVAVASRSPS---PDIANTFLE   39 (147)
Q Consensus         1 ~p~~~pgv-~~~L~~L~~~g~~l~i~S~~~~---~~~~~~~l~   39 (147)
                      +|.+.++. .++++.+++.|+.+++.||+..   .+.++.++.
T Consensus        80 EPll~~~~~~~l~~~~k~~g~~i~l~TNG~~~~~~~~~~~ll~  122 (246)
T PRK11145         80 EAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLD  122 (246)
T ss_pred             cHhcCHHHHHHHHHHHHHcCCCEEEECCCCCCcchHHHHHHHH
Confidence            47778885 5999999999999999999873   244444444

>PLN02334 ribulose-phosphate 3-epimerase

Probab=81.73  E-value=19  Score=26.73  Aligned_cols=112  Identities=13%  Similarity=0.176  Sum_probs=59.4

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCC-hHHHHHHHHhcCccccccccee---cCCCCCcHHHHHHHHHHcCCCC-CcEEEE
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPS-PDIANTFLEKLNIKSMFVAKEI---FSSWSHKTDHFQRIHSRTGVPF-NSMLFF   80 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~-~~~~~~~l~~~gl~~~f~~~~~---~~~~kp~~~~~~~~~~~~~~~~-~~~v~V   80 (147)
                      +.....++.++..|.++++..|.+. .+.++..+..-| .+|+-....   .+..+..+..+..+.+--...+ -.++.+
T Consensus       102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~~-~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I~a~  180 (229)
T PLN02334        102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKGL-VDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDIEVD  180 (229)
T ss_pred             hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhccC-CCEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcEEEe
Confidence            3456888999999999999997432 223333332201 344322111   1122233444444432111111 234455


Q ss_pred             -eCCcccHHHHHHcCCeEEEECCCC-ChHHHHHHHHHHHH
Q 032106           81 -DDEDRNIDAVSKMGVTGILVGNGV-NLGALRQGLTKFSQ  118 (147)
Q Consensus        81 -gDs~~Di~~a~~~Gi~~i~v~~~~-~~~~~~~~l~~~~~  118 (147)
                       |=+..++....++|+..+.+.... ..+.....++++.+
T Consensus       181 GGI~~e~i~~l~~aGad~vvvgsai~~~~d~~~~~~~l~~  220 (229)
T PLN02334        181 GGVGPSTIDKAAEAGANVIVAGSAVFGAPDYAEVISGLRA  220 (229)
T ss_pred             CCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence             445568999999999999887653 22334444455543

>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]

Probab=80.78  E-value=21  Score=26.74  Aligned_cols=116  Identities=9%  Similarity=0.229  Sum_probs=71.9

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCCh-HHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCC---CcEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSP-DIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPF---NSMLF   79 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~---~~~v~   79 (147)
                      ..+...++|+.+|+.|.+.+|+=|-..+ +.++.++..+++--.+..--.++..|=-++.++++.+--.+-.   +-.+-
T Consensus        94 ~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~vD~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~~~~Ie  173 (220)
T COG0036          94 ATEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDDVDLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDERLDILIE  173 (220)
T ss_pred             cCcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhhCCEEEEEeECCCCcccccCHHHHHHHHHHHHHhcccCCeEEE
Confidence            4567889999999999999999865432 2344556666554333332344445556666666544322222   33566


Q ss_pred             EeCCcc--cHHHHHHcCCeEEEECCC-CChHHHHHHHHHHHHh
Q 032106           80 FDDEDR--NIDAVSKMGVTGILVGNG-VNLGALRQGLTKFSQN  119 (147)
Q Consensus        80 VgDs~~--Di~~a~~~Gi~~i~v~~~-~~~~~~~~~l~~~~~~  119 (147)
                      |+=+.+  .+..+.++|..++..+.. +..+.+...++.++..
T Consensus       174 VDGGI~~~t~~~~~~AGad~~VaGSalF~~~d~~~~i~~~~~~  216 (220)
T COG0036         174 VDGGINLETIKQLAAAGADVFVAGSALFGADDYKATIRELRGE  216 (220)
T ss_pred             EeCCcCHHHHHHHHHcCCCEEEEEEEEeCCccHHHHHHHHHHH
Confidence            666666  477778889998888765 2333466666665544

>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein

Probab=80.29  E-value=5.3  Score=27.88  Aligned_cols=37  Identities=19%  Similarity=0.320  Sum_probs=26.3

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL   41 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~   41 (147)
                      .+.+.++++.+++.|+++++.||...++..+.++..+
T Consensus        74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~i  110 (147)
T TIGR02826        74 REALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHL  110 (147)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhC
Confidence            3568889999999999999999765433444444443

Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=80.29  E-value=5.9  Score=36.29  Aligned_cols=71  Identities=10%  Similarity=0.261  Sum_probs=51.5

Q ss_pred             HHHHHHHHhcCccccc---c---cceecCCCCCcHHHHHHHHHHcCCCCCcE-EEEeCCcc-cHHHHHHcCCeEEEECCC
Q 032106           32 DIANTFLEKLNIKSMF---V---AKEIFSSWSHKTDHFQRIHSRTGVPFNSM-LFFDDEDR-NIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        32 ~~~~~~l~~~gl~~~f---~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~~-v~VgDs~~-Di~~a~~~Gi~~i~v~~~  103 (147)
                      ..++..|+..++....   .   ..++++..-.+...++++..++|++.+++ ||+||+-+ |++.... |+....|..|
T Consensus       924 ~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~-G~~~tvi~~g 1002 (1050)
T TIGR02468       924 KELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLG-GLHKTVILKG 1002 (1050)
T ss_pred             HHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhC-CceeEEEEec
Confidence            3456778888876533   1   12566667789999999999999999998 66999999 9886643 6644444344

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
2wm8_A	187	Crystal Structure Of Human Magnesium-Dependent Phos		3e-22
1u7o_A	164	Magnesium Dependent Phosphatase 1 (Mdp-1) Length =		4e-22

>pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) Length = 187

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
           LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  HF
Sbjct: 69  LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHF 126
Query: 64  QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
           +R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QGL  F++
Sbjct: 127 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 181

>pdb|1U7O|A Chain A, Magnesium Dependent Phosphatase 1 (Mdp-1) Length = 164

Iteration: 1
 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
           LYP    +L  L+  G+ VA ASR+     AN  LE  ++   F+ +EI+     K  HF
Sbjct: 47  LYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHF 104
Query: 64  QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
           +R+H +TGVPF+ M+FFDDE+RNI  V ++GVT I + +G++L  L QGL  F++
Sbjct: 105 ERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	2e-41
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	3e-11
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	3e-09
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	2e-07
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	8e-06
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	4e-05
1te2_A	226	Putative phosphatase; structural genomics, phospha	8e-05
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	9e-05
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	2e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	3e-04
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	3e-04
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	3e-04
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	3e-04
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	3e-04
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	5e-04
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	6e-04
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	6e-04
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	6e-04
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	8e-04
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	8e-04

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score =  135 bits (341), Expect = 2e-41
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 2   PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTD 61
             LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  
Sbjct: 67  VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY--PGSKIT 124

Query: 62  HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQN 119
           HF+R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QGL  F++ 
Sbjct: 125 HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAKA 182

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 8/107 (7%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
                   + +L A K  G+   + S  P    A   + +L    +     +  S     
Sbjct: 16  TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAP-IRELETNGVVDK--VLLSGELGV 72

Query: 61  -----DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN 102
                  FQ       +P    +  DD   N+    + G+ G+    
Sbjct: 73  EKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 10/121 (8%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
             +L P    I+H L+++G  V V S +          E   I+       I+ S     
Sbjct: 89  FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA--DHIYLSQDLGM 146

Query: 61  -----DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTK 115
                  +Q +    G   +  +FFDD   NI+  +++G+T ILV    +   +     K
Sbjct: 147 RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV---KDKTTIPDYFAK 203

Query: 116 F 116
            
Sbjct: 204 V 204

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 43.0 bits (101), Expect = 8e-06
 Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 8/113 (7%)

Query: 3   SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV-----AKEIFSSWS 57
           S     K ++ +L+++GI +   +      + +   ++  ++           ++ +   
Sbjct: 103 SPINGVKEVIASLRERGIKIGSTTGYTRE-MMDIVAKEAALQGYKPDFLVTPDDVPAGRP 161

Query: 58  HKTDHFQRIHSRTGV-PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGAL 109
           +      +     GV P N M+   D   ++      G+  + V  G +   L
Sbjct: 162 YP-WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGL 213

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 12/121 (9%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
                P    +   L  +   +   + +   D+    +    +         F+S +   
Sbjct: 84  QSQPRPEVLALARDLG-QRYRMYSLN-NEGRDLNEYRIRTFGLGEFL--LAFFTSSALGV 139

Query: 61  -----DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTK 115
                  ++   +   V     +  DD  +N+ A   +G+  +     V+   LR+ L  
Sbjct: 140 MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC---VDAAQLREELAA 196

Query: 116 F 116
            
Sbjct: 197 L 197

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 39.9 bits (94), Expect = 8e-05
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF 47
           L P  +  +   K++G+ V +AS SP   +    L   +++  F
Sbjct: 95  LLPGVREAVALCKEQGLLVGLASASP-LHMLEKVLTMFDLRDSF 137

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF 47
           ++P    +L+ +K +G+++ +AS S   DI    LE+  ++  F
Sbjct: 90  IFPDVLKVLNEVKSQGLEIGLASSSVKADI-FRALEENRLQGFF 132

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA 49
           + P  + +L  L+ + I V +AS S     A T L  L ++  F  
Sbjct: 96  VLPGIRSLLADLRAQQISVGLASVSL---NAPTILAALELREFFTF 138

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 38.6 bits (89), Expect = 3e-04
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 5   YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS 55
               K +L+ LK  G ++ +A+  P  +      E L +   F A  I ++
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRPYTE-TVVPFENLGLLPYFEADFIATA 266

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF 47
           L P    +L  LK++ I + +AS S     A   L +L I   F
Sbjct: 93  LLPGIGRLLCQLKNENIKIGLASSSR---NAPKILRRLAIIDDF 133

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 7/46 (15%), Positives = 13/46 (28%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA 49
             P A  +L  +K +G+   V + S    +                
Sbjct: 110 RMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKEL 155

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT--- 60
             P A  ++  L  +G  + + +R+    +A+  LE + +   F   ++           
Sbjct: 71  PAPGAVELVRELAGRGYRLGILTRNARE-LAHVTLEAIGLADCFAEADVLGRDEAPPKPH 129

Query: 61  -DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN 105
                ++     V  + M+   D   ++D     G   +LV    N
Sbjct: 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN 175

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 7/105 (6%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTF--LEKLNIKSMFVAKEIFSSW-S 57
               +      +   ++ G+ V + S          F    + +I  +      F +   
Sbjct: 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDTKIG 185

Query: 58  HKTDH--FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
           HK +   +++I    G   N++LF  D  R   A  +  V   +V
Sbjct: 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF 47
           +YP    +L  L+   I +A+AS S         LE++N+   F
Sbjct: 92  VYPGILQLLKDLRSNKIKIALASASK---NGPFLLERMNLTGYF 132

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 3/52 (5%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS 55
             P A  +L  L  + +   +A+     D A   L+ L +    +   I + 
Sbjct: 92  ALPGAVELLETLDKENLKWCIATSGG-IDTATINLKALKLDINKIN--IVTR 140

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 37.6 bits (87), Expect = 6e-04
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV-----AKEIFSSWSH 58
           L P  K +   L  +GI V   +      +A   L     +         A ++      
Sbjct: 112 LIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPA-LIAAKEQGYTPASTVFATDVVRGRPF 170

Query: 59  KTDHFQRIHSRTGV-PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQ 111
             D   ++     V   N  +  DD    I+   + G+  + V    N   L +
Sbjct: 171 -PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDR 223

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 3  SLYPHAKGILHALKDKGIDVAVAS--RSPSPDIANTFLEKLNIKSMFVAKEIFSS 55
           L  +AK  L  +K  G   A+ S   +   ++    L    I   F    I++S
Sbjct: 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYAS 86

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 10/105 (9%)

Query: 4   LYPHAKGILHALKDKGIDVAVAS--RSPSPDIANTFLEKLNIKSMFVAKEIFSSW---SH 58
           +    K  L  +K++G+  AV               LE+  +       + F +    S+
Sbjct: 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVLSY 157

Query: 59  KTD--HFQRIHSRTGVPFNSMLFF-DDEDRNIDAVSKMGVTGILV 100
           K     F+++ +   V     L   D    +     K+G+  + +
Sbjct: 158 KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWI 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.88
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.86
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.86
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.86
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.85
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.85
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.83
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.83
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.82
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.82
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.82
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.82
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.82
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.81
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.81
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.81
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.81
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.81
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.81
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.81
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.8
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.8
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.8
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.8
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.8
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.8
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.8
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.8
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.79
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.79
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.79
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.79
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.79
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.79
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.79
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.79
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.79
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.78
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.78
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.78
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.78
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.78
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.77
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.77
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.77
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.77
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.77
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.77
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.76
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.76
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.75
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.75
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.75
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.75
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.75
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.74
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.74
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.73
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.72
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.72
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.72
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.72
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.72
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.72
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.71
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.71
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.7
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.69
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.69
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.69
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.67
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.66
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.65
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.64
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.63
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.63
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.62
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.62
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.62
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.62
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.61
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.61
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.61
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.6
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.59
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.59
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.58
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.58
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.58
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.57
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.56
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.56
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.56
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.55
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.54
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.54
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.54
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.5
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.5
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.49
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.45
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.43
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.14
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.4
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.39
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.39
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.35
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.34
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.33
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.29
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.26
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.23
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.14
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.09
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.04
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.0
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.94
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.89
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.84
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.81
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.76
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.75
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.73
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.73
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.67
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.63
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.63
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.58
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.56
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.52
4gxt_A	385	A conserved functionally unknown protein; structur	98.51
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.48
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.42
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.39
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.38
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.36
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.35
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.32
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.32
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.3
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.27
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	98.1
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.05
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.96
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.96
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.93
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.93
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.91
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.81
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.81
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.78
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	97.67
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.57
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.49
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.27
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.19
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	96.99
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.66
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	96.35
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.18
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	95.85
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	95.79
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.65
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	95.65
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.37
2q5c_A	196	NTRC family transcriptional regulator; structural	95.03
2pju_A	225	Propionate catabolism operon regulatory protein; s	95.0
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	94.06
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	93.72
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	93.31
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	92.97
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	92.79
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	92.69
1wv2_A	265	Thiazole moeity, thiazole biosynthesis protein THI	92.62
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	92.32
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	91.72
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	91.7
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	91.69
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	91.51
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	91.2
3dao_A	283	Putative phosphatse; structural genomics, joint ce	91.02
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	90.88
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	90.68
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	90.3
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	90.0
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	87.37
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	87.31
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	86.83
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	86.61
3can_A	182	Pyruvate-formate lyase-activating enzyme; structur	86.38
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	84.46
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	84.44
2yx0_A	342	Radical SAM enzyme; predicted tRNA modification en	81.43
2z2u_A	311	UPF0026 protein MJ0257; metal binding protein; 2.4	80.41
3luf_A	259	Two-component system response regulator/ggdef doma	80.36

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.88  E-value=2.3e-22  Score=145.61  Aligned_cols=105  Identities=21%  Similarity=0.317  Sum_probs=95.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++.|++++|+||++ ...+...++.+|+.+||+.+   +.++..||+|++|..+++++|++|++|+
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~-~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  161 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTP-QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV  161 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCc-HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceE
Confidence            3679999999999999999999999888 67778999999999999985   6677899999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEE-ECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGIL-VGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~-v~~~~~~~  107 (147)
                      ||||+.+|+.+|+++||.+|+ +.++.+..
T Consensus       162 ~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~  191 (216)
T 3kbb_A          162 VFEDSKSGVEAAKSAGIERIYGVVHSLNDG  191 (216)
T ss_dssp             EEECSHHHHHHHHHTTCCCEEEECCSSSCC
T ss_pred             EEecCHHHHHHHHHcCCcEEEEecCCCCCH
Confidence            999999999999999999985 77776543

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.86  E-value=2e-21  Score=144.31  Aligned_cols=100  Identities=24%  Similarity=0.401  Sum_probs=92.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++++||+..   ...+++.+|+..+|+.+   +.++..||+|++|..+++++|++|++|+|
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            4789999999999999999999998763   46789999999999985   66778999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+..|+.+|+++|+.+|+|.++..
T Consensus       172 VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          172 IEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             EESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             EcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            99999999999999999999998764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.86  E-value=6.5e-21  Score=136.49  Aligned_cols=117  Identities=44%  Similarity=0.717  Sum_probs=104.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|+++|++++|+||+.....++.+++.+|+..+|+.+..+  .+|++..|..+++++|++|++|+||||
T Consensus        68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~igD  145 (187)
T 2wm8_A           68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY--PGSKITHFERLQQKTGIPFSQMIFFDD  145 (187)
T ss_dssp             CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES--SSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred             CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE--eCchHHHHHHHHHHcCCChHHEEEEeC
Confidence            578999999999999999999999876336678899999999999874333  468899999999999999999999999


Q ss_pred             CcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhc
Q 032106           83 EDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~  121 (147)
                      +.+|+.+|+++|+.++++.++...+.+...+..|.+...
T Consensus       146 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l~~~~~~~~  184 (187)
T 2wm8_A          146 ERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAKAQT  184 (187)
T ss_dssp             CHHHHHHHHTTTCEEEECSSSCCHHHHHHHHHHHHHTC-
T ss_pred             CccChHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999988887653

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.86  E-value=7e-21  Score=136.65  Aligned_cols=103  Identities=16%  Similarity=0.189  Sum_probs=92.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC--hHHHHHHHHhcCcccccccc---eec----CCCCCcHHHHHHHHHHcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS--PDIANTFLEKLNIKSMFVAK---EIF----SSWSHKTDHFQRIHSRTGVP   73 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~--~~~~~~~l~~~gl~~~f~~~---~~~----~~~kp~~~~~~~~~~~~~~~   73 (147)
                      .++||+.++|+.|+++|++++|+||+..  +..++..++.+|+..+|+.+   +..    +..||++.+|..+++++|++
T Consensus        34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~  113 (189)
T 3ib6_A           34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID  113 (189)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence            6899999999999999999999998873  16678899999999999886   222    56799999999999999999


Q ss_pred             CCcEEEEeCC-cccHHHHHHcCCeEEEECCCCC
Q 032106           74 FNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        74 ~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |++++||||+ ..|+.+|+++|+.++++.++..
T Consensus       114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~  146 (189)
T 3ib6_A          114 KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEV  146 (189)
T ss_dssp             GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTT
T ss_pred             cccEEEECCCcHHHHHHHHHCCCeEEEECCccc
Confidence            9999999999 6999999999999999987653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.85  E-value=2.6e-21  Score=140.29  Aligned_cols=100  Identities=14%  Similarity=0.268  Sum_probs=91.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc--eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK--EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~--~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      .++||+.++|+.|++ |++++|+||+. ...++..++.+|+..||+.+  .. +..||+|+.|..+++++|++|++|+||
T Consensus        84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~lg~~p~~~~~v  160 (210)
T 2ah5_A           84 QLFPQIIDLLEELSS-SYPLYITTTKD-TSTAQDMAKNLEIHHFFDGIYGSS-PEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             EECTTHHHHHHHHHT-TSCEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEEC-SSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCHHHHHHHHHc-CCeEEEEeCCC-HHHHHHHHHhcCchhheeeeecCC-CCCCCChHHHHHHHHHcCCCcccEEEE
Confidence            478999999999999 99999999887 66678889999999999875  23 678999999999999999999999999


Q ss_pred             eCCcccHHHHHHcCCeEEEECCCCC
Q 032106           81 DDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||+.+|+++|+++|+.++++.++..
T Consensus       161 gDs~~Di~~a~~aG~~~i~v~~~~~  185 (210)
T 2ah5_A          161 GDTKFDMLGARETGIQKLAITWGFG  185 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred             CCCHHHHHHHHHCCCcEEEEcCCCC
Confidence            9999999999999999999999865

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.85  E-value=5.2e-21  Score=135.49  Aligned_cols=105  Identities=16%  Similarity=0.237  Sum_probs=91.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh--------------HHHHHHHHhcC--ccccccc----ceecCCCCCcHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP--------------DIANTFLEKLN--IKSMFVA----KEIFSSWSHKTDH   62 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~--------------~~~~~~l~~~g--l~~~f~~----~~~~~~~kp~~~~   62 (147)
                      .++||+.++|+.|+++|++++|+||+...              ..++..++.+|  ++.+|..    .+.+...||++.+
T Consensus        27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~  106 (179)
T 3l8h_A           27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGM  106 (179)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHH
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHH
Confidence            58999999999999999999999988731              44577888899  7766642    1456679999999


Q ss_pred             HHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        63 ~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |+.+++++|++|++++||||+.+|+.+|+++|+.++++.++....
T Consensus       107 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~  151 (179)
T 3l8h_A          107 YRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRK  151 (179)
T ss_dssp             HHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHH
T ss_pred             HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcch
Confidence            999999999999999999999999999999999999999987544

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.83  E-value=5.4e-21  Score=129.09  Aligned_cols=101  Identities=15%  Similarity=0.219  Sum_probs=90.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+   +.....||++..|..++++++++|++++|
T Consensus        18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~   96 (137)
T 2pr7_A           18 EDQRRWRNLLAAAKKNGVGTVILSNDP-GGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL   96 (137)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECSC-CGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            468999999999999999999999988 45557888999999999875   34466899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |||+..|+.+|+++|+.++++.++.
T Consensus        97 vgD~~~di~~a~~~G~~~i~~~~~~  121 (137)
T 2pr7_A           97 VDDSILNVRGAVEAGLVGVYYQQFD  121 (137)
T ss_dssp             EESCHHHHHHHHHHTCEEEECSCHH
T ss_pred             EcCCHHHHHHHHHCCCEEEEeCChH
Confidence            9999999999999999999998754

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.83  E-value=3.2e-20  Score=138.16  Aligned_cols=100  Identities=21%  Similarity=0.246  Sum_probs=90.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++++|++..   +...++.+|+.+||+.+   +.++..||+|++|..+++++|+.|++|+|
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~---~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  192 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSSASKN---AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG  192 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccchhHHHHHHHHHhcccccccccccch---hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE
Confidence            5789999999999999999999886642   45789999999999985   66778999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+..|+++|+++|+.+|+|.+...
T Consensus       193 VGDs~~Di~aA~~aG~~~i~v~~~~~  218 (250)
T 4gib_A          193 IEDASAGIDAINSANMFSVGVGNYEN  218 (250)
T ss_dssp             EESSHHHHHHHHHTTCEEEEESCTTT
T ss_pred             ECCCHHHHHHHHHcCCEEEEECChhH
Confidence            99999999999999999999976543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.82  E-value=2.9e-20  Score=137.11  Aligned_cols=102  Identities=20%  Similarity=0.288  Sum_probs=92.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+. +|+.+   +.+...||++.+|..+++++|++|++|+|
T Consensus       110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~  187 (240)
T 2hi0_A          110 GPFPGILDLMKNLRQKGVKLAVVSNKP-NEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY  187 (240)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            478999999999999999999999887 66678899999998 89875   45567999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |||+.+|+.+|+++|+.++++.++...
T Consensus       188 vGDs~~Di~~a~~aG~~~v~v~~~~~~  214 (240)
T 2hi0_A          188 IGDSEIDIQTARNSEMDEIAVNWGFRS  214 (240)
T ss_dssp             EESSHHHHHHHHHTTCEEEEESSSSSC
T ss_pred             EcCCHHHHHHHHHCCCeEEEECCCCCc
Confidence            999999999999999999999988654

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.82  E-value=8.6e-20  Score=137.32  Aligned_cols=100  Identities=14%  Similarity=0.261  Sum_probs=89.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc---Ccccccccc--eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL---NIKSMFVAK--EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~---gl~~~f~~~--~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||+.++|+.|+++|++++|+||++ ...++.+++.+   |+..||+.+  ..++ .||+|.+|..+++++|+.|++|
T Consensus       130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~-~~~~~~~l~~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~lg~~p~~~  207 (261)
T 1yns_A          130 EFFADVVPAVRKWREAGMKVYIYSSGS-VEAQKLLFGHSTEGDILELVDGHFDTKIG-HKVESESYRKIADSIGCSTNNI  207 (261)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSEEECGGGC-CTTCHHHHHHHHHHHTSCGGGE
T ss_pred             ccCcCHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHhhcccChHhhccEEEecCCC-CCCCHHHHHHHHHHhCcCcccE
Confidence            589999999999999999999999888 66667788854   599999874  2455 8999999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +||||+..|+.+|+++|+.++++.++.
T Consensus       208 l~VgDs~~di~aA~~aG~~~i~v~~~~  234 (261)
T 1yns_A          208 LFLTDVTREASAAEEADVHVAVVVRPG  234 (261)
T ss_dssp             EEEESCHHHHHHHHHTTCEEEEECCTT
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEEeCCC
Confidence            999999999999999999999998754

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.82  E-value=1.1e-19  Score=132.70  Aligned_cols=103  Identities=19%  Similarity=0.211  Sum_probs=95.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++|+||+. ...++.+++.+|+..+|+.+   +.+...||++..|+.+++++|++|++|+|
T Consensus       104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~  182 (237)
T 4ex6_A          104 LLYPGVLEGLDRLSAAGFRLAMATSKV-EKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV  182 (237)
T ss_dssp             GBCTTHHHHHHHHHHTTEEEEEECSSC-HHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCCCHHHHHHHHHhCCCcEEEEcCCC-hHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            579999999999999999999999887 67778999999999999885   56667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |||+.+|+.+|+++|+.+++|.++...
T Consensus       183 vGD~~~Di~~a~~aG~~~i~v~~g~~~  209 (237)
T 4ex6_A          183 IGDGVPDAEMGRAAGMTVIGVSYGVSG  209 (237)
T ss_dssp             EESSHHHHHHHHHTTCEEEEESSSSSC
T ss_pred             EcCCHHHHHHHHHCCCeEEEEecCCCC
Confidence            999999999999999999999998654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.82  E-value=1.8e-19  Score=132.50  Aligned_cols=104  Identities=15%  Similarity=0.215  Sum_probs=94.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|+.|++|+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i  171 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGN-PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL  171 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSC-HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCC-chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            3578999999999999999999999887 67778899999999999875   5667799999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+. +|+.+|+++|+.++++.++...
T Consensus       172 ~iGD~~~~Di~~a~~aG~~~~~v~~g~~~  200 (241)
T 2hoq_A          172 MVGDRLYSDIYGAKRVGMKTVWFRYGKHS  200 (241)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEECCSCCC
T ss_pred             EECCCchHhHHHHHHCCCEEEEECCCCCC
Confidence            999998 8999999999999999887654

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.81  E-value=2.1e-19  Score=131.93  Aligned_cols=103  Identities=20%  Similarity=0.295  Sum_probs=94.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGN-DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            3578999999999999999999999887 67778899999999999875   5566799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+.+|+++|+.++++.++..
T Consensus       183 ~iGD~~~Di~~a~~aG~~~~~v~~~~~  209 (240)
T 2no4_A          183 FVSSNAWDLGGAGKFGFNTVRINRQGN  209 (240)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECTTCC
T ss_pred             EEeCCHHHHHHHHHCCCEEEEECCCCC
Confidence            999999999999999999999988754

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.81  E-value=1.3e-19  Score=132.32  Aligned_cols=102  Identities=25%  Similarity=0.309  Sum_probs=93.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+.+   +.+...||++..|..+++++|++|++++|
T Consensus        83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  161 (222)
T 2nyv_A           83 KPYPEIPYTLEALKSKGFKLAVVSNKL-EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI  161 (222)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence            578999999999999999999999887 67778899999999999875   44566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       162 vGD~~~Di~~a~~aG~~~i~v~~g~~  187 (222)
T 2nyv_A          162 VGDTDADIEAGKRAGTKTALALWGYV  187 (222)
T ss_dssp             EESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred             ECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            99999999999999999999988753

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.81  E-value=8.8e-20  Score=132.12  Aligned_cols=105  Identities=20%  Similarity=0.280  Sum_probs=96.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +.+...||++..|..+++++|++|++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKP-TVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            4689999999999999999999999887 67778999999999999885   5667799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+.+|+.+|+++|+.+++|.++....
T Consensus       164 ~iGD~~~Di~~a~~aG~~~i~v~~g~~~~  192 (226)
T 3mc1_A          164 MIGDREYDVIGALKNNLPSIGVTYGFGSY  192 (226)
T ss_dssp             EEESSHHHHHHHHTTTCCEEEESSSSSCH
T ss_pred             EECCCHHHHHHHHHCCCCEEEEccCCCCH
Confidence            99999999999999999999999887543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.81  E-value=2.2e-19  Score=128.09  Aligned_cols=101  Identities=18%  Similarity=0.261  Sum_probs=93.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +.+...||++..|+.+++++|++|++++|
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  167 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSV-KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALI  167 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCc-HHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEE
Confidence            478999999999999999999999887 77778999999999999875   55667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |||+.+|+.+|+++|+.++++.++.
T Consensus       168 iGD~~~Di~~a~~aG~~~~~~~~~~  192 (214)
T 3e58_A          168 IEDSEKGIAAGVAADVEVWAIRDNE  192 (214)
T ss_dssp             EECSHHHHHHHHHTTCEEEEECCSS
T ss_pred             EeccHhhHHHHHHCCCEEEEECCCC
Confidence            9999999999999999999998753

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.81  E-value=2.6e-19  Score=129.76  Aligned_cols=103  Identities=9%  Similarity=0.138  Sum_probs=94.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  173 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGS-RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL  173 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence            3679999999999999999999999887 67778899999999999875   5566789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+.+|+++|+.++++.++..
T Consensus       174 ~iGD~~~Di~~a~~aG~~~~~~~~~~~  200 (230)
T 3um9_A          174 FVSCNSWDATGAKYFGYPVCWINRSNG  200 (230)
T ss_dssp             EEESCHHHHHHHHHHTCCEEEECTTSC
T ss_pred             EEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence            999999999999999999999988643

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.81  E-value=2.5e-19  Score=129.88  Aligned_cols=104  Identities=19%  Similarity=0.197  Sum_probs=95.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +.+...||++..|+.+++++|++|++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i  168 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGG-IDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL  168 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCc-hhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEE
Confidence            3578999999999999999999999887 67778999999999999875   5666799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+.+|+++|+.+++|.++...
T Consensus       169 ~iGD~~~Di~~a~~aG~~~i~v~~g~~~  196 (233)
T 3s6j_A          169 VIGDAIWDMLAARRCKATGVGLLSGGYD  196 (233)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEEGGGSCC
T ss_pred             EEeCCHHhHHHHHHCCCEEEEEeCCCCc
Confidence            9999999999999999999999987543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.81  E-value=1.8e-19  Score=131.05  Aligned_cols=102  Identities=15%  Similarity=0.292  Sum_probs=93.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +..+..||++..|..+++++|++|++|+|
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (233)
T 3umb_A           99 SAFPENVPVLRQLREMGLPLGILSNGN-PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF  177 (233)
T ss_dssp             EECTTHHHHHHHHHTTTCCEEEEESSC-HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred             CCCCCHHHHHHHHHhCCCcEEEEeCCC-HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence            578999999999999999999999888 67778899999999999875   56667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       178 vGD~~~Di~~a~~~G~~~~~v~~~~~  203 (233)
T 3umb_A          178 VSSNGWDACGATWHGFTTFWINRLGH  203 (233)
T ss_dssp             EESCHHHHHHHHHHTCEEEEECTTCC
T ss_pred             EeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence            99999999999999999999987643

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.80  E-value=2.7e-19  Score=130.35  Aligned_cols=102  Identities=13%  Similarity=0.269  Sum_probs=93.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++|
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           95 APFSEVPDSLRELKRRGLKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            468999999999999999999999887 67778899999999999875   45667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       174 iGD~~~Di~~a~~aG~~~~~~~~~~~  199 (232)
T 1zrn_A          174 VASNAWDATGARYFGFPTCWINRTGN  199 (232)
T ss_dssp             EESCHHHHHHHHHHTCCEEEECTTCC
T ss_pred             EeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence            99999999999999999999987643

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.80  E-value=3.5e-20  Score=132.07  Aligned_cols=102  Identities=12%  Similarity=0.193  Sum_probs=85.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCC--------------ChHHHHHHHHhcCcccccccc--------eecCCCCCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSP--------------SPDIANTFLEKLNIKSMFVAK--------EIFSSWSHK   59 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~--------------~~~~~~~~l~~~gl~~~f~~~--------~~~~~~kp~   59 (147)
                      ..++||+.++|+.|+++|++++|+||+.              ....++.+++.+|+.  |+.+        +.+...||+
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~  118 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPK  118 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTS
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCC
Confidence            3689999999999999999999999872              145667889999986  6653        344568999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           60 TDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +.+|+.+++++|++|++++||||+..|+.+|+++|+.++++.++..
T Consensus       119 p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~  164 (176)
T 2fpr_A          119 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL  164 (176)
T ss_dssp             CGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred             HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcc
Confidence            9999999999999999999999999999999999999999988753

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.80  E-value=1.8e-19  Score=128.75  Aligned_cols=101  Identities=10%  Similarity=0.148  Sum_probs=92.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++| +++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++|
T Consensus        86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~-~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  163 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRY-RMYSLNNEG-RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVM  163 (200)
T ss_dssp             CBCHHHHHHHHHHTTTS-EEEEEECCC-HHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCccHHHHHHHHHHcC-CEEEEeCCc-HHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            47999999999999999 999999887 67778899999999999875   45567899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       164 vgD~~~Di~~a~~aG~~~~~~~~~~~  189 (200)
T 3cnh_A          164 VDDRLQNVQAARAVGMHAVQCVDAAQ  189 (200)
T ss_dssp             EESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred             eCCCHHHHHHHHHCCCEEEEECCchh
Confidence            99999999999999999999988654

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.80  E-value=5.1e-19  Score=132.66  Aligned_cols=101  Identities=14%  Similarity=0.149  Sum_probs=90.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++ +++++|+||+. ...++..++.+|+..||+.+   +.++..||++++|..+++++|++|++|+
T Consensus       120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  197 (260)
T 2gfh_A          120 MILADDVKAMLTELRK-EVRLLLLTNGD-RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  197 (260)
T ss_dssp             CCCCHHHHHHHHHHHT-TSEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCcCHHHHHHHHHc-CCcEEEEECcC-hHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence            3689999999999987 59999999888 67778899999999999885   5556789999999999999999999999


Q ss_pred             EEeCC-cccHHHHHHcCC-eEEEECCCC
Q 032106           79 FFDDE-DRNIDAVSKMGV-TGILVGNGV  104 (147)
Q Consensus        79 ~VgDs-~~Di~~a~~~Gi-~~i~v~~~~  104 (147)
                      ||||+ .+|+.+|+++|+ .++++.++.
T Consensus       198 ~vGDs~~~Di~~A~~aG~~~~i~v~~~~  225 (260)
T 2gfh_A          198 MVGDTLETDIQGGLNAGLKATVWINKSG  225 (260)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred             EECCCchhhHHHHHHCCCceEEEEcCCC
Confidence            99995 899999999999 899997653

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.80  E-value=2.8e-19  Score=130.91  Aligned_cols=104  Identities=17%  Similarity=0.166  Sum_probs=91.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc--ccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF--VAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f--~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...+...++. ++..+|  +.+   +.+...||++..|+.+++++|++|++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  184 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSG-QTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE  184 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCc-hHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence            4688999999999999999999999887 4555777888 999999  664   55677999999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |+||||+.+|+.+|+++|+.++++.++....
T Consensus       185 ~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~  215 (247)
T 3dv9_A          185 ALVIENAPLGVQAGVAAGIFTIAVNTGPLHD  215 (247)
T ss_dssp             EEEEECSHHHHHHHHHTTSEEEEECCSSSCH
T ss_pred             eEEEeCCHHHHHHHHHCCCeEEEEcCCCCCH
Confidence            9999999999999999999999999886543

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.80  E-value=3.6e-19  Score=130.87  Aligned_cols=104  Identities=19%  Similarity=0.197  Sum_probs=93.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc--ccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF--VAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f--~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...+...++. ++..+|  +.+   +.+...||++..|..+++++|++|++
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  185 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSG-QLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE  185 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCC-CHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCc-HHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence            4689999999999999999999999888 4555777888 999999  664   55667999999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |+||||+.+|+.+|+++|+.++++.++....
T Consensus       186 ~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~  216 (243)
T 3qxg_A          186 AVVIENAPLGVEAGHKAGIFTIAVNTGPLDG  216 (243)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEEECCSSSCH
T ss_pred             eEEEeCCHHHHHHHHHCCCEEEEEeCCCCCH
Confidence            9999999999999999999999999987543

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.80  E-value=3.2e-19  Score=130.74  Aligned_cols=105  Identities=23%  Similarity=0.280  Sum_probs=96.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCC-CCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVP-FNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~-~~~~   77 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+.+   +..+..||++..|..+++++|++ |+++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  187 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKP-TVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc-HHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            3589999999999999999999999877 67778999999999999885   56677999999999999999999 9999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ++|||+.+|+.+|+++|+.++++.++....
T Consensus       188 i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~  217 (240)
T 3sd7_A          188 IMVGDRKYDIIGAKKIGIDSIGVLYGYGSF  217 (240)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEESSSSCCH
T ss_pred             EEECCCHHHHHHHHHCCCCEEEEeCCCCCH
Confidence            999999999999999999999999887543

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.80  E-value=9.7e-19  Score=127.13  Aligned_cols=102  Identities=17%  Similarity=0.217  Sum_probs=93.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+ .|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|+.+++++|++|++++
T Consensus       106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  183 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLA-PQYNLYILSNGF-RELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL  183 (240)
T ss_dssp             CCBSTTHHHHHHHHT-TTSEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred             CCcCccHHHHHHHHH-cCCeEEEEeCCc-hHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            367999999999999 999999999887 67778899999999999875   5667799999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+. +|+.+|+++|+.++++.++..
T Consensus       184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~  211 (240)
T 3qnm_A          184 MIGDSWEADITGAHGVGMHQAFYNVTER  211 (240)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             EECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence            999996 999999999999999998763

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.79  E-value=4.9e-19  Score=127.21  Aligned_cols=102  Identities=17%  Similarity=0.223  Sum_probs=92.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc--ccc--eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF--VAK--EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f--~~~--~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|  +.+  ......||++..|..+++++|++|++|+
T Consensus        70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i  148 (205)
T 3m9l_A           70 RPAPGAVELVRELAGRGYRLGILTRNA-RELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMV  148 (205)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred             CCCccHHHHHHHHHhcCCeEEEEeCCc-hHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            478999999999999999999999887 67778999999999999  554  2336789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+.+|+.+|+++|+.++++.++..
T Consensus       149 ~iGD~~~Di~~a~~aG~~~i~v~~~~~  175 (205)
T 3m9l_A          149 MVGDYRFDLDCGRAAGTRTVLVNLPDN  175 (205)
T ss_dssp             EEESSHHHHHHHHHHTCEEEECSSSSC
T ss_pred             EECCCHHHHHHHHHcCCEEEEEeCCCC
Confidence            999999999999999999999998764

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.79  E-value=4.4e-19  Score=131.24  Aligned_cols=102  Identities=25%  Similarity=0.382  Sum_probs=93.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+.+   +.+...||++..|..+++++|+.|++|+|
T Consensus       114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  192 (243)
T 2hsz_A          114 RLYPNVKETLEALKAQGYILAVVTNKP-TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  192 (243)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEECCc-HHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence            578999999999999999999999887 67778899999999999875   44566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       193 vGD~~~Di~~a~~aG~~~i~v~~g~~  218 (243)
T 2hsz_A          193 VGDSQNDIFAAHSAGCAVVGLTYGYN  218 (243)
T ss_dssp             EESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred             EcCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            99999999999999999999998754

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.79  E-value=5.2e-19  Score=132.22  Aligned_cols=102  Identities=17%  Similarity=0.130  Sum_probs=92.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. .. +...++.+|+..+|+.+   +.++..||++.+|..+++++|++|++|+|
T Consensus       106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~-~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~  183 (263)
T 3k1z_A          106 QVLDGAEDTLRECRTRGLRLAVISNFD-RR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAH  183 (263)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCC-TT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             eECcCHHHHHHHHHhCCCcEEEEeCCc-HH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            479999999999999999999999876 44 57899999999999875   55677999999999999999999999999


Q ss_pred             EeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           80 FDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        80 VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |||+. +|+.+|+++|+.++++.++...
T Consensus       184 vGD~~~~Di~~a~~aG~~~i~~~~~~~~  211 (263)
T 3k1z_A          184 VGDNYLCDYQGPRAVGMHSFLVVGPQAL  211 (263)
T ss_dssp             EESCHHHHTHHHHTTTCEEEEECCSSCC
T ss_pred             ECCCcHHHHHHHHHCCCEEEEEcCCCCC
Confidence            99997 9999999999999999988643

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.79  E-value=6.1e-19  Score=128.39  Aligned_cols=103  Identities=16%  Similarity=0.162  Sum_probs=92.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCC-cE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFN-SM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~-~~   77 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|+ ++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~  180 (231)
T 3kzx_A          102 FMLNDGAIELLDTLKENNITMAIVSNKN-GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEV  180 (231)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTE
T ss_pred             ceECcCHHHHHHHHHHCCCeEEEEECCC-HHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCE
Confidence            3578999999999999999999999887 67778999999999999875   5567799999999999999999999 99


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+.+|+.+|+++|+.++++..+..
T Consensus       181 v~vGD~~~Di~~a~~aG~~~v~~~~~~~  208 (231)
T 3kzx_A          181 FFIGDSISDIQSAIEAGCLPIKYGSTNI  208 (231)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEECC---
T ss_pred             EEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence            9999999999999999999999976543

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.79  E-value=4.2e-19  Score=128.64  Aligned_cols=97  Identities=15%  Similarity=0.104  Sum_probs=82.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCC-CcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPF-NSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~-~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||.. ...+..   ..+  .+|+.+   +.+...||+|++|..+++++|+.+ ++|+
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~-~~~~~~---~~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v  109 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELP-EALSTP---LAA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCV  109 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSC-HHHHHH---HHT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCE
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCCh-HHHHHH---hcC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEE
Confidence            579999999999999999999999877 444333   233  345553   556678999999999999999976 8999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+..|+.+|+++|+.+|+|.++..
T Consensus       110 ~VGDs~~Di~aA~~aG~~~i~v~~g~~  136 (196)
T 2oda_A          110 LISGDPRLLQSGLNAGLWTIGLASCGP  136 (196)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred             EEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence            999999999999999999999999864

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.79  E-value=5.1e-19  Score=131.50  Aligned_cols=103  Identities=17%  Similarity=0.114  Sum_probs=93.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc-cccc---eecCCCCCcHHHHHHHHHHcCCCC-Cc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM-FVAK---EIFSSWSHKTDHFQRIHSRTGVPF-NS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~-f~~~---~~~~~~kp~~~~~~~~~~~~~~~~-~~   76 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...++..++.+++..+ |+.+   +.+...||++..|..+++++|++| ++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  188 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYG-PGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNG  188 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCc-hHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence            4689999999999999999999999887 6777889999998888 7764   556678999999999999999999 99


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+||||+.+|+.+|+++|+.+++|.++..
T Consensus       189 ~i~vGD~~~Di~~a~~aG~~~v~v~~g~~  217 (277)
T 3iru_A          189 CIKVDDTLPGIEEGLRAGMWTVGVSCSGN  217 (277)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred             EEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence            99999999999999999999999999864

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.79  E-value=4.8e-19  Score=127.31  Aligned_cols=104  Identities=16%  Similarity=0.266  Sum_probs=92.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh------cCcccccccc---eecCCCCCcHHHHHHHHHHcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK------LNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVP   73 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~------~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~   73 (147)
                      .++||+.++|+.|++ |++++|+||+. ...++.+++.      +|+..+|+.+   +.++..||++..|..+++++|++
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~-~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  166 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTN-PYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK  166 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCC-HHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCC-HHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence            468999999999999 99999999887 6667778888      8999999875   45667999999999999999999


Q ss_pred             CCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHH
Q 032106           74 FNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGA  108 (147)
Q Consensus        74 ~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~  108 (147)
                      |++|+||||+.+|+.+|+++|+.++++.++....+
T Consensus       167 ~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~  201 (211)
T 2i6x_A          167 PEETLFIDDGPANVATAERLGFHTYCPDNGENWIP  201 (211)
T ss_dssp             GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHH
T ss_pred             hHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence            99999999999999999999999999998766543

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.79  E-value=3.4e-19  Score=141.26  Aligned_cols=102  Identities=17%  Similarity=0.144  Sum_probs=92.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc--cc---eecC-----------CCCCcHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV--AK---EIFS-----------SWSHKTDHFQRI   66 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~--~~---~~~~-----------~~kp~~~~~~~~   66 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+  .+   +.+.           ..||+|..|..+
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~-~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCc-HHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            689999999999999999999999988 667788999999999998  43   2222           379999999999


Q ss_pred             HHHcC--------------CCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           67 HSRTG--------------VPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        67 ~~~~~--------------~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ++++|              +.|++|+||||+..|+.+|+++|+.+++|.++..
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~  346 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK  346 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCcc
Confidence            99999              8999999999999999999999999999999864

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.79  E-value=7.4e-19  Score=128.23  Aligned_cols=103  Identities=11%  Similarity=0.170  Sum_probs=89.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC--------------hHHHHHHHHhcCcccccccc---------------eec
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS--------------PDIANTFLEKLNIKSMFVAK---------------EIF   53 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~--------------~~~~~~~l~~~gl~~~f~~~---------------~~~   53 (147)
                      .++||+.++|+.|+++|++++|+||+..              ...++..++.+|+.  |+.+               +.+
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~  127 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVC  127 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccC
Confidence            6899999999999999999999998872              25567888999986  5442               124


Q ss_pred             CCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE-EEECCCCChH
Q 032106           54 SSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG-ILVGNGVNLG  107 (147)
Q Consensus        54 ~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~-i~v~~~~~~~  107 (147)
                      ...||++.+|..+++++|++|++++||||+.+|+.+|+++|+.+ ++|.++....
T Consensus       128 ~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~  182 (211)
T 2gmw_A          128 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPIT  182 (211)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCC
T ss_pred             cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCcc
Confidence            56899999999999999999999999999999999999999999 9999886543

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.78  E-value=4.4e-19  Score=131.51  Aligned_cols=103  Identities=15%  Similarity=0.039  Sum_probs=94.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-c---eecC-CCCCcHHHHHHHHHHcCCCCCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-K---EIFS-SWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-~---~~~~-~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      +.++||+.++|+.|++.|++++|+||+. ...++..++.+|+..+|+. +   +.++ ..||++..|+.+++++|++|++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  187 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSE-RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER  187 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSC-HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence            4578999999999999999999999887 6777899999999999987 4   6677 8999999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+||||+.+|+.+|+++|+.++++.++..
T Consensus       188 ~i~iGD~~~Di~~a~~aG~~~i~v~~g~~  216 (259)
T 4eek_A          188 CVVIEDSVTGGAAGLAAGATLWGLLVPGH  216 (259)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEECCTTS
T ss_pred             EEEEcCCHHHHHHHHHCCCEEEEEccCCC
Confidence            99999999999999999999999988743

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.78  E-value=4.1e-19  Score=129.30  Aligned_cols=97  Identities=26%  Similarity=0.343  Sum_probs=81.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ++||+.++|+.|++.|++++|+||+..   ++..++.+|+..+|+.+   +.+...||++.+|..+++++|++|++|+||
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v  169 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI  169 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence            799999999999999999999998753   57889999999999875   566679999999999999999999999999


Q ss_pred             eCCcccHHHHHHcCCeEEEECCC
Q 032106           81 DDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      ||+.+|+.+|+++|+.++++.+.
T Consensus       170 GDs~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          170 EDAEAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             ECSHHHHHHHHHTTCEEEECC--
T ss_pred             eCCHHHHHHHHHcCCEEEEECCc
Confidence            99999999999999999999764

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.78  E-value=2.4e-18  Score=125.06  Aligned_cols=100  Identities=13%  Similarity=0.143  Sum_probs=92.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcC-CCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTG-VPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~-~~~~~~v   78 (147)
                      .++||+.++|+.|++. ++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++| ++|++++
T Consensus       103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  180 (238)
T 3ed5_A          103 QLIDGAFDLISNLQQQ-FDLYIVTNGV-SHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL  180 (238)
T ss_dssp             CBCTTHHHHHHHHHTT-SEEEEEECSC-HHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred             CCCccHHHHHHHHHhc-CeEEEEeCCC-HHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeE
Confidence            6899999999999999 9999999887 67778899999999999875   556779999999999999999 9999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ||||+. +|+.+|+++|+.++++.++.
T Consensus       181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~  207 (238)
T 3ed5_A          181 IIGDSLTADIKGGQLAGLDTCWMNPDM  207 (238)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred             EECCCcHHHHHHHHHCCCEEEEECCCC
Confidence            999998 99999999999999998864

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=1e-18  Score=126.18  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=90.2

Q ss_pred             CCchhHHHHHHHHHHCC-CeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            3 SLYPHAKGILHALKDKG-IDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      .++||+.++|+.|++.| ++++++||+. ...++..++.+++..+|+.  .+...||++..|+.+++++|++|++|++||
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~--~~~~~kpk~~~~~~~~~~lgi~~~~~i~iG  181 (234)
T 3ddh_A          105 ELLPGVKETLKTLKETGKYKLVVATKGD-LLDQENKLERSGLSPYFDH--IEVMSDKTEKEYLRLLSILQIAPSELLMVG  181 (234)
T ss_dssp             CBCTTHHHHHHHHHHHCCCEEEEEEESC-HHHHHHHHHHHTCGGGCSE--EEEESCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             CcCccHHHHHHHHHhCCCeEEEEEeCCc-hHHHHHHHHHhCcHhhhhe--eeecCCCCHHHHHHHHHHhCCCcceEEEEC
Confidence            67999999999999999 9999999887 6677889999999999987  445678999999999999999999999999


Q ss_pred             CCc-ccHHHHHHcCCeEEEECCCC
Q 032106           82 DED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        82 Ds~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |+. +|+.+|+++|+.++++..+.
T Consensus       182 D~~~~Di~~a~~aG~~~v~v~~~~  205 (234)
T 3ddh_A          182 NSFKSDIQPVLSLGGYGVHIPFEV  205 (234)
T ss_dssp             SCCCCCCHHHHHHTCEEEECCCCT
T ss_pred             CCcHHHhHHHHHCCCeEEEecCCc
Confidence            997 99999999999999996554

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.78  E-value=5.8e-19  Score=128.98  Aligned_cols=103  Identities=14%  Similarity=0.197  Sum_probs=91.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHH------HhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFL------EKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVP   73 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l------~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~   73 (147)
                      .++||+.++|+.|++. ++++|+||+. ...++.++      +.+|+..+|+.+   +.++..||++.+|+.+++++|++
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~-~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~  189 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTN-DIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID  189 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCC-HHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCC-hHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence            4679999999999998 9999999888 66666444      778998899875   55677999999999999999999


Q ss_pred             CCcEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           74 FNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        74 ~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |++|+||||+.+|+.+|+++|+.++++.++....
T Consensus       190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k  223 (229)
T 4dcc_A          190 PKETFFIDDSEINCKVAQELGISTYTPKAGEDWS  223 (229)
T ss_dssp             GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred             HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence            9999999999999999999999999999876543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.77  E-value=2.8e-18  Score=124.62  Aligned_cols=103  Identities=24%  Similarity=0.386  Sum_probs=93.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|++. ++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSD-TEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV  176 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCC-HHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence            36889999999999999 9999999887 67778899999999999875   4556799999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      +|||+. +|+.+|+++|+.++++.++...
T Consensus       177 ~vGD~~~~Di~~a~~aG~~~~~v~~~~~~  205 (234)
T 3u26_A          177 YVGDNPVKDCGGSKNLGMTSILLDRKGEK  205 (234)
T ss_dssp             EEESCTTTTHHHHHTTTCEEEEECSSSTT
T ss_pred             EEcCCcHHHHHHHHHcCCEEEEECCCCCc
Confidence            999998 9999999999999999987544

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.77  E-value=8.6e-19  Score=128.16  Aligned_cols=102  Identities=14%  Similarity=0.162  Sum_probs=87.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh---------------HHHHHHHHhcCcc--cccccc-----------eecC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP---------------DIANTFLEKLNIK--SMFVAK-----------EIFS   54 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~---------------~~~~~~l~~~gl~--~~f~~~-----------~~~~   54 (147)
                      .++||+.++|+.|+++|++++|+||+. .               ..++..++.+|+.  .+|...           +.+.
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~  134 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQS-GIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP  134 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECH-HHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcC-CCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCc
Confidence            689999999999999999999999886 4               4667889999974  222221           2345


Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE-EEECCCCC
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG-ILVGNGVN  105 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~-i~v~~~~~  105 (147)
                      ..||++.+|+.+++++|++|++++||||+.+|+.+|+++|+.+ ++|.++..
T Consensus       135 ~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~  186 (218)
T 2o2x_A          135 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA  186 (218)
T ss_dssp             TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE
T ss_pred             cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCC
Confidence            6899999999999999999999999999999999999999999 99998764

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.77  E-value=3.3e-18  Score=126.82  Aligned_cols=97  Identities=19%  Similarity=0.328  Sum_probs=90.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+  |++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++|+|
T Consensus        93 ~~~~~~~~~l~~l~--g~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           93 TPYPDAAQCLAELA--PLKRAILSNGA-PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CBCTTHHHHHHHHT--TSEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CCCccHHHHHHHHc--CCCEEEEeCcC-HHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            67899999999998  89999999887 67778899999999999875   55667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      |||+.+|+.+|+++|+.++++.+
T Consensus       170 vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          170 VSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EESCHHHHHHHHHHTCEEEEECC
T ss_pred             EeCChhhHHHHHHCCCEEEEECC
Confidence            99999999999999999999987

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.77  E-value=7.8e-19  Score=126.20  Aligned_cols=101  Identities=11%  Similarity=0.133  Sum_probs=92.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++ ++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|++|++++|
T Consensus        83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           83 ELYPGITSLFEQLPSE-LRLGIVTSQR-RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             EECTTHHHHHHHSCTT-SEEEEECSSC-HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CcCCCHHHHHHHHHhc-CcEEEEeCCC-HHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            5789999999999999 9999999887 67778899999999999875   45567899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       161 vGD~~~Di~~a~~aG~~~~~~~~~~~  186 (209)
T 2hdo_A          161 IGDSVSDEQTAQAANVDFGLAVWGMD  186 (209)
T ss_dssp             EESSHHHHHHHHHHTCEEEEEGGGCC
T ss_pred             ECCChhhHHHHHHcCCeEEEEcCCCC
Confidence            99999999999999999999987754

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.77  E-value=1.8e-18  Score=123.88  Aligned_cols=98  Identities=13%  Similarity=0.212  Sum_probs=89.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.+ |+.|+++ ++++|+||+. ...++..++.+|+..+|+.+   +.++..||++..|..+++++|  |++++|
T Consensus        74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~  148 (201)
T 2w43_A           74 KAYEDTKY-LKEISEI-AEVYALSNGS-INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL  148 (201)
T ss_dssp             EECGGGGG-HHHHHHH-SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred             ccCCChHH-HHHHHhC-CeEEEEeCcC-HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence            57899999 9999999 9999999887 67778899999999999875   455678999999999999999  999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+++|+.++++.++..
T Consensus       149 vGD~~~Di~~a~~aG~~~~~~~~~~~  174 (201)
T 2w43_A          149 VSSNAFDVIGAKNAGMRSIFVNRKNT  174 (201)
T ss_dssp             EESCHHHHHHHHHTTCEEEEECSSSC
T ss_pred             EeCCHHHhHHHHHCCCEEEEECCCCC
Confidence            99999999999999999999988643

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.77  E-value=1.4e-18  Score=128.23  Aligned_cols=105  Identities=21%  Similarity=0.277  Sum_probs=91.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh-cCcccccccc---e--ecCCCCCcHHHHHHHHHHcCCCC-
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK-LNIKSMFVAK---E--IFSSWSHKTDHFQRIHSRTGVPF-   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~-~gl~~~f~~~---~--~~~~~kp~~~~~~~~~~~~~~~~-   74 (147)
                      ..++||+.++|+.|++.|++++|+||+. ...+...+.. +++..+|+.+   +  .+...||++..|+.+++++|++| 
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~-~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  189 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSR-SASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA  189 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCC-HHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCC
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCC-HHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCC
Confidence            3689999999999999999999999887 5555555544 5888889875   4  66779999999999999999998 


Q ss_pred             -CcEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           75 -NSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        75 -~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                       ++|+||||+.+|+.+|+++|+.++++.++...+
T Consensus       190 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~  223 (250)
T 3l5k_A          190 MEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR  223 (250)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCG
T ss_pred             cceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCch
Confidence             999999999999999999999999999887543

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.76  E-value=3.1e-19  Score=127.72  Aligned_cols=103  Identities=23%  Similarity=0.386  Sum_probs=89.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh-cCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK-LNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~-~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..+.. +|+..+|+.+   +.++..||++..|..+++++|++|++++
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (206)
T 2b0c_A           91 ALRPEVIAIMHKLREQGHRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV  169 (206)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEECCC-hHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            468999999999999999999999887 4444455555 7788888774   4456789999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+.+|+++|+.++++.++...
T Consensus       170 ~vgD~~~Di~~a~~aG~~~~~~~~~~~~  197 (206)
T 2b0c_A          170 FFDDNADNIEGANQLGITSILVKDKTTI  197 (206)
T ss_dssp             EEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred             EeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence            9999999999999999999999886543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.76  E-value=4e-18  Score=128.12  Aligned_cols=96  Identities=17%  Similarity=0.218  Sum_probs=80.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc--C---------cccccccc--eecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL--N---------IKSMFVAK--EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~--g---------l~~~f~~~--~~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.    |++++|+||++ ...++..++.+  |         +..+|+..  ..+...||+|+.|..++++
T Consensus       125 ~~~pgv~e~L~~----g~~l~i~Tn~~-~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~  199 (253)
T 2g80_A          125 PVYADAIDFIKR----KKRVFIYSSGS-VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD  199 (253)
T ss_dssp             CCCHHHHHHHHH----CSCEEEECSSC-HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHc----CCEEEEEeCCC-HHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHH
Confidence            578999999988    89999999988 67778888876  5         44444332  1232369999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +|+.|++|+||||+..|+.+|+++|+.++++.+.
T Consensus       200 lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~  233 (253)
T 2g80_A          200 IGAKASEVLFLSDNPLELDAAAGVGIATGLASRP  233 (253)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCT
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCC
Confidence            9999999999999999999999999999999874

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.75  E-value=1.3e-17  Score=120.83  Aligned_cols=101  Identities=15%  Similarity=0.267  Sum_probs=90.2

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCC--ChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSP--SPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~--~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ++|++.++|+.|++.|++++++||+.  ....++..++.+++..+|+.+   +.++..||++..|..+++++|++|++|+
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  179 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL  179 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE
Confidence            58999999999999999999999765  034457789999999999875   4566789999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +|||+. +|+.+|+.+|+.++++.++.
T Consensus       180 ~iGD~~~nDi~~a~~aG~~~~~~~~~~  206 (235)
T 2om6_A          180 HIGDTYAEDYQGARKVGMWAVWINQEG  206 (235)
T ss_dssp             EEESCTTTTHHHHHHTTSEEEEECTTC
T ss_pred             EECCChHHHHHHHHHCCCEEEEECCCC
Confidence            999999 99999999999999998874

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.75  E-value=6.1e-18  Score=122.80  Aligned_cols=104  Identities=14%  Similarity=0.165  Sum_probs=91.4

Q ss_pred             CCchhHHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCcccccccc---eec-CCCCCcHHHHHHHHHHcC--CCCC
Q 032106            3 SLYPHAKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIF-SSWSHKTDHFQRIHSRTG--VPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~-~~~kp~~~~~~~~~~~~~--~~~~   75 (147)
                      .++||+.++|+.|++. |++++|+||+. ...++..++.+|+..+|+.+   +.. ...||.+..|..+++++|  ++|+
T Consensus        93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~  171 (234)
T 2hcf_A           93 TLLEGVRELLDALSSRSDVLLGLLTGNF-EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  171 (234)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSC-HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             CcCCCHHHHHHHHHhCCCceEEEEcCCc-HHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcc
Confidence            4689999999999999 99999999887 67778899999999999863   222 235688899999999999  9999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +|+||||+.+|+.+|+++|+.++++.++....
T Consensus       172 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~  203 (234)
T 2hcf_A          172 QIVIIGDTEHDIRCARELDARSIAVATGNFTM  203 (234)
T ss_dssp             GEEEEESSHHHHHHHHTTTCEEEEECCSSSCH
T ss_pred             cEEEECCCHHHHHHHHHCCCcEEEEcCCCCCH
Confidence            99999999999999999999999999986543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.75  E-value=7.2e-18  Score=124.54  Aligned_cols=100  Identities=12%  Similarity=0.187  Sum_probs=89.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      ..++||+.++|+.|+ .|++++|+||+. ...++..++.+++..+|+.+  +...||++..|..+++++|++|++|++||
T Consensus       111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~i--~~~~kp~~~~~~~~~~~l~~~~~~~i~iG  186 (251)
T 2pke_A          111 VEVIAGVREAVAAIA-ADYAVVLITKGD-LFHQEQKIEQSGLSDLFPRI--EVVSEKDPQTYARVLSEFDLPAERFVMIG  186 (251)
T ss_dssp             CCBCTTHHHHHHHHH-TTSEEEEEEESC-HHHHHHHHHHHSGGGTCCCE--EEESCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             CCcCccHHHHHHHHH-CCCEEEEEeCCC-HHHHHHHHHHcCcHHhCcee--eeeCCCCHHHHHHHHHHhCcCchhEEEEC
Confidence            367899999999999 999999999887 66678889999999999874  34578999999999999999999999999


Q ss_pred             CCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           82 DED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        82 Ds~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+. +|+.+|+++|+.++++.++..
T Consensus       187 D~~~~Di~~a~~aG~~~~~v~~~~~  211 (251)
T 2pke_A          187 NSLRSDVEPVLAIGGWGIYTPYAVT  211 (251)
T ss_dssp             SCCCCCCHHHHHTTCEEEECCCC--
T ss_pred             CCchhhHHHHHHCCCEEEEECCCCc
Confidence            999 999999999999999987754

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.75  E-value=1.1e-17  Score=120.27  Aligned_cols=103  Identities=18%  Similarity=0.235  Sum_probs=93.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      +.++|++.++|+.|++.|++++++||.. ...++..++.+++..+|+.+   +..+..||++..|..+++++|+++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i  171 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASP-LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  171 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCc-HHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            4678999999999999999999999887 66678889999999998874   4455689999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +|||+.+|+.+|+.+|+.++++.++.+
T Consensus       172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~  198 (226)
T 1te2_A          172 ALEDSVNGMIASKAARMRSIVVPAPEA  198 (226)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred             EEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence            999999999999999999999998764

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.75  E-value=1.4e-17  Score=125.17  Aligned_cols=102  Identities=19%  Similarity=0.241  Sum_probs=90.8

Q ss_pred             CCCchhHHHHHHHHHHCCC--eEEEEcCCCChHHHHHHHHhcCcccccccc---ee----cCCCCCcHHHHHHHHHHcCC
Q 032106            2 PSLYPHAKGILHALKDKGI--DVAVASRSPSPDIANTFLEKLNIKSMFVAK---EI----FSSWSHKTDHFQRIHSRTGV   72 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~--~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~----~~~~kp~~~~~~~~~~~~~~   72 (147)
                      ..++||+.++|+.|++.|+  +++|+||+. ...++..++.+|+..+|+.+   +.    ...+||++.+|..+++++|+
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~-~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAY-KNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSC-HHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCC-hHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            3579999999999999999  999999887 67778899999999999885   11    24579999999999999999


Q ss_pred             CC-CcEEEEeCCcccHHHHHHcCC-eEEEECCCC
Q 032106           73 PF-NSMLFFDDEDRNIDAVSKMGV-TGILVGNGV  104 (147)
Q Consensus        73 ~~-~~~v~VgDs~~Di~~a~~~Gi-~~i~v~~~~  104 (147)
                      .| ++|+||||+.+|+.+|+++|+ .++++..+.
T Consensus       220 ~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~  253 (282)
T 3nuq_A          220 ARYENAYFIDDSGKNIETGIKLGMKTCIHLVENE  253 (282)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCC
T ss_pred             CCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCc
Confidence            99 999999999999999999999 777887665

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.74  E-value=8.8e-18  Score=118.96  Aligned_cols=100  Identities=13%  Similarity=0.199  Sum_probs=90.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|++.++|+.|++.|++++++||+. ..... .++.+++..+|+.+   +..+..||++..|..+++++|++|+++++
T Consensus        85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~  162 (207)
T 2go7_A           85 VLMPGAREVLAWADESGIQQFIYTHKG-NNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  162 (207)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC-THHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCc-hHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEE
Confidence            468999999999999999999999887 56667 88999999998874   44566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |||+.+|+.+|+.+|+.++++.++.
T Consensus       163 iGD~~nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          163 IGDRTLDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             EESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             ECCCHHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999999999998876

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.74  E-value=1.2e-17  Score=121.06  Aligned_cols=96  Identities=16%  Similarity=0.267  Sum_probs=87.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++. ++++++||+.. .     ++.+|+..+|+.+   +.++..||++.+|..+++++|++|++++|
T Consensus       105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          105 QIFPEVQPTLEILAKT-FTLGVITNGNA-D-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CBCTTHHHHHHHHHTT-SEEEEEESSCC-C-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCcCHHHHHHHHHhC-CeEEEEECCch-h-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            5899999999999998 99999998873 2     6789999999875   55677899999999999999999999999


Q ss_pred             EeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+. +|+.+|+++|+.++++.++..
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~v~~~~~  204 (230)
T 3vay_A          178 VGDHPSDDIAGAQQAGMRAIWYNPQGK  204 (230)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred             EeCChHHHHHHHHHCCCEEEEEcCCCC
Confidence            99998 999999999999999988764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.73  E-value=2.7e-17  Score=119.24  Aligned_cols=97  Identities=12%  Similarity=0.165  Sum_probs=85.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHH---HHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRI---HSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~---~~~~~~~~~~   76 (147)
                      .++||+.++|+.|++ |++++|+||+. ...++..++.  +..+|+.+   +.++..||++..|..+   ++++|++|++
T Consensus        99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~-~~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~  174 (240)
T 3smv_A           99 PAFPDTVEALQYLKK-HYKLVILSNID-RNEFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKD  174 (240)
T ss_dssp             CBCTTHHHHHHHHHH-HSEEEEEESSC-HHHHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGG
T ss_pred             CCCCcHHHHHHHHHh-CCeEEEEeCCC-hhHHHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchh
Confidence            689999999999999 79999999887 6666677766  55788875   5567799999999999   8899999999


Q ss_pred             EEEEeCCc-ccHHHHHHcCCeEEEECCC
Q 032106           77 MLFFDDED-RNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        77 ~v~VgDs~-~Di~~a~~~Gi~~i~v~~~  103 (147)
                      |+||||+. +|+.+|+++|+.++++..+
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          175 ILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             EEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             EEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            99999996 9999999999999999865

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.72  E-value=2.8e-17  Score=122.06  Aligned_cols=103  Identities=13%  Similarity=0.098  Sum_probs=92.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-ccc---eecCCCCCcHHHHHHHHHHcCCCC-Cc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VAK---EIFSSWSHKTDHFQRIHSRTGVPF-NS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~~---~~~~~~kp~~~~~~~~~~~~~~~~-~~   76 (147)
                      ..++||+.++|+.|++.|++++++||.. ...++.+++.+++..+| +.+   +.+...||++..|..+++++|+++ ++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  180 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYT-REMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  180 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSC-HHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCC-HHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence            3578999999999999999999999887 66678888888888776 553   556678999999999999999999 99


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +++|||+.+|+.+|+.+|+.++++.++..
T Consensus       181 ~i~iGD~~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          181 MIKVGDTVSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             EEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence            99999999999999999999999999865

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.72  E-value=2.4e-17  Score=118.50  Aligned_cols=97  Identities=26%  Similarity=0.351  Sum_probs=87.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++++||..   .++..++.+++..+|+.+   +.++..||++..|+.+++++|++|++|++
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  167 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASASK---NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCT---THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCcH---HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            478999999999999999999999772   246788999999999874   55667899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      |||+.+|+.+|+.+|+.++++..
T Consensus       168 iGD~~nDi~~a~~aG~~~~~~~~  190 (221)
T 2wf7_A          168 LEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             EESSHHHHHHHHHHTCEEEEESC
T ss_pred             EeCCHHHHHHHHHCCCEEEEECC
Confidence            99999999999999999999953

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.72  E-value=3.6e-17  Score=117.51  Aligned_cols=102  Identities=19%  Similarity=0.195  Sum_probs=92.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|++.++|+.|++.|++++++||.. ...++..++.+++..+|+.+   +.....||++..|..+++++|++++++++
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~  167 (225)
T 3d6j_A           89 ILFPDTLPTLTHLKKQGIRIGIISTKY-RFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLY  167 (225)
T ss_dssp             EECTTHHHHHHHHHHHTCEEEEECSSC-HHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCC-HHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEE
Confidence            468999999999999999999999887 67778889999998888774   44566899999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+.+|+.++++.++.+
T Consensus       168 iGD~~nDi~~~~~aG~~~~~~~~~~~  193 (225)
T 3d6j_A          168 IGDSTVDAGTAAAAGVSFTGVTSGMT  193 (225)
T ss_dssp             EESSHHHHHHHHHHTCEEEEETTSSC
T ss_pred             EcCCHHHHHHHHHCCCeEEEECCCCC
Confidence            99999999999999999999988764

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.72  E-value=2.5e-17  Score=116.30  Aligned_cols=99  Identities=18%  Similarity=0.194  Sum_probs=88.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++++||.. . .++..++.+++..+|+.+   +.+...||++..|..+++++|++  ++++
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~  157 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRN-D-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV  157 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-T-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCc-H-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence            378999999999999999999999875 3 457889999999999874   45667899999999999999998  9999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |||+.+|+.+|+.+|+.++++.++..
T Consensus       158 iGD~~~Di~~a~~aG~~~~~~~~~~~  183 (190)
T 2fi1_A          158 IGDRPIDIEAGQAAGLDTHLFTSIVN  183 (190)
T ss_dssp             EESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred             EcCCHHHHHHHHHcCCeEEEECCCCC
Confidence            99999999999999999999987543

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.72  E-value=3.8e-17  Score=119.60  Aligned_cols=96  Identities=11%  Similarity=0.196  Sum_probs=87.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++. ++++++||+. ...++.+++.+|+.  |+.+   +.+...||++..|+.+++++|++|++++|
T Consensus       116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~-~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  191 (254)
T 3umg_A          116 TPWPDSVPGLTAIKAE-YIIGPLSNGN-TSLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML  191 (254)
T ss_dssp             CBCTTHHHHHHHHHHH-SEEEECSSSC-HHHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             cCCcCHHHHHHHHHhC-CeEEEEeCCC-HHHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            5789999999999997 9999999887 67778889999985  7663   56677999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      |||+.+|+.+|+.+|+.++++.+
T Consensus       192 iGD~~~Di~~a~~aG~~~~~~~~  214 (254)
T 3umg_A          192 AAAHNGDLEAAHATGLATAFILR  214 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEECC
T ss_pred             EeCChHhHHHHHHCCCEEEEEec
Confidence            99999999999999999999983

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.72  E-value=7.7e-18  Score=135.02  Aligned_cols=101  Identities=16%  Similarity=0.189  Sum_probs=85.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCC--CChHHHHHHHHhc--Ccccccccc---eecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRS--PSPDIANTFLEKL--NIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~--~~~~~~~~~l~~~--gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      .++||+.++|+.|+++|++++|+||+  ..... ...+...  ++..+|+.+   +.++..||+|++|..+++++|++|+
T Consensus       100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~-~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~  178 (555)
T 3i28_A          100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAE-RDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS  178 (555)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTT-HHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             CcChhHHHHHHHHHHCCCEEEEEeCCCccccch-hhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChh
Confidence            47899999999999999999999987  11111 2333333  788899885   6677899999999999999999999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +|+||||+.+|+.+|+++|+.++++.++.
T Consensus       179 ~~~~v~D~~~di~~a~~aG~~~~~~~~~~  207 (555)
T 3i28_A          179 EVVFLDDIGANLKPARDLGMVTILVQDTD  207 (555)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred             HEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence            99999999999999999999999998754

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.71  E-value=2e-17  Score=119.16  Aligned_cols=96  Identities=15%  Similarity=0.165  Sum_probs=86.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce-------------ecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE-------------IFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~-------------~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+..+|+.+-             .....|||+..|+.++++
T Consensus        75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~  153 (217)
T 3m1y_A           75 PLFEGALELVSALKEKNYKVVCFSGGF-DLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL  153 (217)
T ss_dssp             CBCBTHHHHHHHHHTTTEEEEEEEEEE-HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence            589999999999999999999999887 677788999999999987641             223479999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +|++|++++||||+.+|+.+|+++|+.+++
T Consensus       154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          154 LNISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999876

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.71  E-value=4.9e-17  Score=119.47  Aligned_cols=96  Identities=11%  Similarity=0.235  Sum_probs=86.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++. ++++|+||+. ...++.+++.+|+.  |+.+   +.++..||++..|+.+++++|++|++|+|
T Consensus       120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~-~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          120 RPWPDTLAGMHALKAD-YWLAALSNGN-TALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             EECTTHHHHHHHHTTT-SEEEECCSSC-HHHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCccHHHHHHHHHhc-CeEEEEeCCC-HHHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            4689999999999886 9999999887 67778889999985  7664   56678999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      |||+.+|+.+|+++|+.++++.+
T Consensus       196 iGD~~~Di~~a~~aG~~~~~~~~  218 (254)
T 3umc_A          196 CAAHNYDLKAARALGLKTAFIAR  218 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEECC
T ss_pred             EcCchHhHHHHHHCCCeEEEEec
Confidence            99999999999999999999983

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.70  E-value=3.6e-18  Score=124.28  Aligned_cols=96  Identities=24%  Similarity=0.306  Sum_probs=80.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. .. ++..++.+|+..+|+.+   +.++..||++..|..+++++|+.|   +|
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~-~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~  169 (220)
T 2zg6_A           95 FLYDDTLEFLEGLKSNGYKLALVSNAS-PR-VKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---VH  169 (220)
T ss_dssp             EECTTHHHHHHHHHTTTCEEEECCSCH-HH-HHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---EE
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEeCCc-HH-HHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EE
Confidence            478999999999999999999999886 44 67889999999999875   555678999999999999999988   99


Q ss_pred             EeCCcc-cHHHHHHcCCeEEEECCC
Q 032106           80 FDDEDR-NIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        80 VgDs~~-Di~~a~~~Gi~~i~v~~~  103 (147)
                      |||+.. |+.+|+++|+.++++.++
T Consensus       170 vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          170 VGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             EESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             EcCCchHhHHHHHHCCCeEEEECCC
Confidence            999999 999999999999999865

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.69  E-value=9.4e-17  Score=120.74  Aligned_cols=104  Identities=18%  Similarity=0.183  Sum_probs=91.6

Q ss_pred             CCCchhHHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCC-----
Q 032106            2 PSLYPHAKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGV-----   72 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~-----   72 (147)
                      +.++||+.++|+.|++. |++++|+||+. ...++..++.+++. +|+.+   +.+...||++..|..+++++|+     
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~-~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  190 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGT-RDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ  190 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSC-HHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSS
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCC-HHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcccc
Confidence            35789999999999999 99999999887 67778889999986 46553   4556789999999999999999     


Q ss_pred             --CCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           73 --PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        73 --~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                        +|++|++|||+.+|+++|+++|+.+++|.++....
T Consensus       191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~  227 (275)
T 2qlt_A          191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLD  227 (275)
T ss_dssp             CGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHH
T ss_pred             CCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHH
Confidence              99999999999999999999999999999986543

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.69  E-value=1.3e-16  Score=111.22  Aligned_cols=90  Identities=18%  Similarity=0.242  Sum_probs=79.9

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                      +.|++.++|+.|+++|++++|+||++ ...++..++.+|+..+|+.      .||++..|..++++++++|++++||||+
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~-~~~~~~~l~~~gl~~~~~~------~kp~~~~~~~~~~~~~~~~~~~~~vGD~  109 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRD-SAPLITRLKELGVEEIYTG------SYKKLEIYEKIKEKYSLKDEEIGFIGDD  109 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCC-CHHHHHHHHHTTCCEEEEC------C--CHHHHHHHHHHTTCCGGGEEEEECS
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCC-cHHHHHHHHHcCCHhhccC------CCCCHHHHHHHHHHcCCCHHHEEEECCC
Confidence            45788999999999999999999888 5667899999999888864      7899999999999999999999999999


Q ss_pred             cccHHHHHHcCCeEEEE
Q 032106           84 DRNIDAVSKMGVTGILV  100 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i~v  100 (147)
                      .+|+.+|+++|+.+++.
T Consensus       110 ~~Di~~a~~ag~~~~~~  126 (162)
T 2p9j_A          110 VVDIEVMKKVGFPVAVR  126 (162)
T ss_dssp             GGGHHHHHHSSEEEECT
T ss_pred             HHHHHHHHHCCCeEEec
Confidence            99999999999986643

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.69  E-value=2.1e-16  Score=114.26  Aligned_cols=99  Identities=18%  Similarity=0.194  Sum_probs=88.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-ccc---eecCCC--CCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VAK---EIFSSW--SHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~~---~~~~~~--kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++||+.++|+.|+.   +++|+||+. ...++..++.+++..+| +.+   +.++..  ||++..|..+++++|++|++
T Consensus        87 ~~~~~~~~~l~~l~~---~~~i~s~~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~  162 (229)
T 2fdr_A           87 KIIDGVKFALSRLTT---PRCICSNSS-SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  162 (229)
T ss_dssp             CBCTTHHHHHHHCCS---CEEEEESSC-HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             ccCcCHHHHHHHhCC---CEEEEECCC-hhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence            578999999998864   899999887 66778899999999999 664   445667  99999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +++|||+.+|+.+|+.+|+.++++.++..
T Consensus       163 ~i~iGD~~~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          163 VVVVEDSVHGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred             eEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence            99999999999999999999999998765

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.67  E-value=1.1e-16  Score=123.84  Aligned_cols=96  Identities=15%  Similarity=0.213  Sum_probs=86.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce-------------ecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE-------------IFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~-------------~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+.+-             .....||++..|..++++
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~-~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGL-DIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCcc-HHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            579999999999999999999999888 788899999999999987531             122458999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +|++|++++||||+.+|+.+|+++|+.+++
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999998776

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.66  E-value=9.4e-17  Score=117.68  Aligned_cols=96  Identities=16%  Similarity=0.214  Sum_probs=83.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|+++| +++|+||+. ...++..++.+|+.++|+.+.....  +|+..+..+++  +++|++|+||||
T Consensus        96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~-~~~~~~~l~~~gl~~~f~~~~~~~~--~K~~~~~~~~~--~~~~~~~~~vgD  169 (231)
T 2p11_A           96 RVYPGALNALRHLGARG-PTVILSDGD-VVFQPRKIARSGLWDEVEGRVLIYI--HKELMLDQVME--CYPARHYVMVDD  169 (231)
T ss_dssp             GBCTTHHHHHHHHHTTS-CEEEEEECC-SSHHHHHHHHTTHHHHTTTCEEEES--SGGGCHHHHHH--HSCCSEEEEECS
T ss_pred             CcCccHHHHHHHHHhCC-CEEEEeCCC-HHHHHHHHHHcCcHHhcCeeEEecC--ChHHHHHHHHh--cCCCceEEEEcC
Confidence            57999999999999999 999999888 5667889999999999987544333  45677777766  799999999999


Q ss_pred             Ccc---cHHHHHHcCCeEEEECCCC
Q 032106           83 EDR---NIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        83 s~~---Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +.+   |+.+|+++|+.++++.++.
T Consensus       170 s~~d~~di~~A~~aG~~~i~v~~g~  194 (231)
T 2p11_A          170 KLRILAAMKKAWGARLTTVFPRQGH  194 (231)
T ss_dssp             CHHHHHHHHHHHGGGEEEEEECCSS
T ss_pred             ccchhhhhHHHHHcCCeEEEeCCCC
Confidence            999   9999999999999999874

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.65  E-value=6.2e-16  Score=117.83  Aligned_cols=99  Identities=15%  Similarity=0.144  Sum_probs=81.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHh--------cCcccccccce--ecCCCCCcHHHHHHHHHHc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEK--------LNIKSMFVAKE--IFSSWSHKTDHFQRIHSRT   70 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~--------~gl~~~f~~~~--~~~~~kp~~~~~~~~~~~~   70 (147)
                      .+|||+.++|+.|+++|++++|+||+....  .+...++.        +|+  +|+.+.  .-...||+|..+..+++++
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~  265 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKH  265 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHH
Confidence            579999999999999999999999887321  12456777        888  366531  1124689999999999999


Q ss_pred             CCCCCc-EEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           71 GVPFNS-MLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        71 ~~~~~~-~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +..+.+ ++||||+..|+.+|+++|+.+++|.||
T Consensus       266 ~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          266 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             TTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             hccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            887655 799999999999999999999999997

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.63  E-value=8.2e-17  Score=117.83  Aligned_cols=95  Identities=16%  Similarity=0.233  Sum_probs=79.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc------eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK------EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~------~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      ++|++.++|+.|+++|++++|+||+.. ..++.+++.  +.++|+.+      ..+...||++..|..+++++|+    |
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~-~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~  161 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSP-TKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R  161 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCC-CSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence            468999999999999999999998873 333445554  45566553      1355689999999999999998    9


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+..|+.+|+++|+.++++.++..
T Consensus       162 l~VGDs~~Di~aA~~aG~~~i~v~~g~~  189 (211)
T 2b82_A          162 IFYGDSDNDITAARDVGARGIRILRASN  189 (211)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred             EEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence            9999999999999999999999998764

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.63  E-value=7.2e-16  Score=110.63  Aligned_cols=129  Identities=10%  Similarity=0.087  Sum_probs=96.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccc-cceecC-----CC-CCcHHHHHHHHHHcCCCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFV-AKEIFS-----SW-SHKTDHFQRIHSRTGVPF   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~-~~~~~~-----~~-kp~~~~~~~~~~~~~~~~   74 (147)
                      ..++||+.++|+.|+++ ++++|+||+. ...++.+++.+|+..+|. .+....     .. +|+|..+..+++++++.|
T Consensus        68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~  145 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRER-FQVVILSDTF-YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY  145 (206)
T ss_dssp             CCCCTTHHHHHHHHHTT-SEEEEEEEEE-HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred             cCCCccHHHHHHHHHhc-CcEEEEECCh-HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence            36799999999999999 9999999887 677789999999999994 332111     11 488899999999999999


Q ss_pred             CcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhh--ccchhhHHHHHHhhcCCCCC
Q 032106           75 NSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW--NTSQKNKQKWISKFSQKPDS  140 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~  140 (147)
                      ++|+||||+.+|+.+|+++|+.+++ .   ..+....    .....  ..+..+...++..+.+++.+
T Consensus       146 ~~~~~iGD~~~Di~~a~~aG~~~~~-~---~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~  205 (206)
T 1rku_A          146 YRVIAAGDSYNDTTMLSEAHAGILF-H---APENVIR----EFPQFPAVHTYEDLKREFLKASSRSLS  205 (206)
T ss_dssp             CEEEEEECSSTTHHHHHHSSEEEEE-S---CCHHHHH----HCTTSCEECSHHHHHHHHHHHCSSCCC
T ss_pred             CEEEEEeCChhhHHHHHhcCccEEE-C---CcHHHHH----HHhhhccccchHHHHHHHHHHhccccC
Confidence            9999999999999999999998664 2   1222221    11111  22355566677777766543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.62  E-value=2e-15  Score=107.47  Aligned_cols=90  Identities=20%  Similarity=0.228  Sum_probs=81.5

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                      +.+...++|+.|+++|++++|+||++ ...++.+++.+|+..+|..      .||++..++.++++++++|++++||||+
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~-~~~~~~~~~~lgl~~~~~~------~k~k~~~~~~~~~~~~~~~~~~~~vGD~  108 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRD-SPILRRRIADLGIKLFFLG------KLEKETACFDLMKQAGVTAEQTAYIGDD  108 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCC-CHHHHHHHHHHTCCEEEES------CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCC-cHHHHHHHHHcCCceeecC------CCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence            45678999999999999999999888 6667889999999888754      5899999999999999999999999999


Q ss_pred             cccHHHHHHcCCeEEEE
Q 032106           84 DRNIDAVSKMGVTGILV  100 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i~v  100 (147)
                      .+|+.+++.+|+.+++.
T Consensus       109 ~~Di~~~~~ag~~~~~~  125 (180)
T 1k1e_A          109 SVDLPAFAACGTSFAVA  125 (180)
T ss_dssp             GGGHHHHHHSSEEEECT
T ss_pred             HHHHHHHHHcCCeEEeC
Confidence            99999999999997753

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.62  E-value=1.1e-15  Score=110.97  Aligned_cols=99  Identities=18%  Similarity=0.281  Sum_probs=83.1

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc--ccccce-----------ecC----CCCCcHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS--MFVAKE-----------IFS----SWSHKTDHFQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~--~f~~~~-----------~~~----~~kp~~~~~~   64 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..  +|+.+-           ...    ..+|||..|.
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~  163 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK  163 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCh-HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence            4689999999999999999999999887 677789999999973  775421           111    1368899999


Q ss_pred             HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           65 RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        65 ~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      .+++++|+  ++|+||||+.+|+.+|+++|+ +++++...
T Consensus       164 ~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~  200 (225)
T 1nnl_A          164 LLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNV  200 (225)
T ss_dssp             HHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSC
T ss_pred             HHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCcc
Confidence            99999998  789999999999999999999 88886543

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.62  E-value=6.6e-16  Score=122.95  Aligned_cols=96  Identities=21%  Similarity=0.306  Sum_probs=85.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------------eecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------------EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------------~~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|...             ..+...||++..|..++++
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~-~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~  334 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGF-RRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQR  334 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCc-HHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHH
Confidence            579999999999999999999999887 77889999999999887642             1223379999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +|++|++++||||+.+|+.+|+++|+.+++
T Consensus       335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          335 AGVPMAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             cCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999998876

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.62  E-value=1.2e-15  Score=106.45  Aligned_cols=83  Identities=17%  Similarity=0.349  Sum_probs=76.2

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      +|+.|+++|++++|+||++ ...++.+++.+|+..+|+.      .||++..|..++++++++|++++||||+.+|+.+|
T Consensus        39 ~l~~l~~~g~~~~i~T~~~-~~~~~~~~~~~gl~~~~~~------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  111 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEK-TEIVRRRAEKLKVDYLFQG------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL  111 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSC-CHHHHHHHHHTTCSEEECS------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCC-hHHHHHHHHHcCCCEeecc------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            6999999999999999887 6777899999999988876      48999999999999999999999999999999999


Q ss_pred             HHcCCeEEEE
Q 032106           91 SKMGVTGILV  100 (147)
Q Consensus        91 ~~~Gi~~i~v  100 (147)
                      +++|+.++..
T Consensus       112 ~~ag~~~~~~  121 (164)
T 3e8m_A          112 KRVGIAGVPA  121 (164)
T ss_dssp             TTSSEEECCT
T ss_pred             HHCCCeEEcC
Confidence            9999986653

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.61  E-value=2.6e-15  Score=109.42  Aligned_cols=97  Identities=11%  Similarity=0.108  Sum_probs=83.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----------e---ecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----------E---IFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----------~---~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|...          .   .....++|+..+..++++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATN-SFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            579999999999999999999999888 77889999999998766432          0   112256788899999999


Q ss_pred             cC---CCCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           70 TG---VPFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        70 ~~---~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      +|   ++|++|+||||+.+|+.+++.+|+.++..
T Consensus       171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred             cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence            99   99999999999999999999999987663

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.61  E-value=1e-15  Score=118.49  Aligned_cols=96  Identities=17%  Similarity=0.188  Sum_probs=85.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------------eecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------------EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------------~~~~~~kp~~~~~~~~~~~   69 (147)
                      .++||+.++|+.|++.|++++|+||+. ...++.+++.+|+..+|...             +.+...||++..|..++++
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~-~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~  256 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGF-TYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQ  256 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHH
Confidence            478999999999999999999999887 77788999999998887642             1233468999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +|++|++++||||+.+|+.+++.+|+.+++
T Consensus       257 lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          257 YDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             cCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999998777

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.61  E-value=2.2e-16  Score=116.75  Aligned_cols=98  Identities=15%  Similarity=0.180  Sum_probs=84.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc------eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK------EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~------~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      ++|++.++|+.|+ .|+++ ++||... ......+..+++..+|+.+      +.+...||++.+|..+++++|++|++|
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  199 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKAR-YYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA  199 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCS-EEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCC-cCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence            6899999999999 89999 9998773 3334456678888888621      455568999999999999999999999


Q ss_pred             EEEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           78 LFFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        78 v~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +||||+. +|+.+|+++|+.+++|.++.
T Consensus       200 ~~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          200 VMIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence            9999998 99999999999999999874

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.60  E-value=3.3e-16  Score=116.76  Aligned_cols=103  Identities=14%  Similarity=0.145  Sum_probs=81.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChH-HHHH-HHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPD-IANT-FLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~-~~~~-~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      ..++|++.++|+.|+ .|+++ |+||.+... .... ++...++..+|+.+   +.....||++.+|+.+++++|++|++
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  202 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ  202 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence            357999999999997 88997 999887411 0111 12333455667663   44556899999999999999999999


Q ss_pred             EEEEeCC-cccHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDE-DRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ++||||+ .+|+.+|+++|+.+++|.++...
T Consensus       203 ~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~  233 (264)
T 1yv9_A          203 VIMVGDNYETDIQSGIQNGIDSLLVTSGFTP  233 (264)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEETTSSSC
T ss_pred             EEEECCCcHHHHHHHHHcCCcEEEECCCCCC
Confidence            9999999 59999999999999999987653

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.59  E-value=2.7e-14  Score=102.78  Aligned_cols=81  Identities=17%  Similarity=0.331  Sum_probs=74.9

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      .|+.|+++|++++|+||+. ...++.+++.+|+..+|+.      .||++..+..++++++++|++++||||+.+|+.++
T Consensus        54 ~l~~L~~~g~~~~ivTn~~-~~~~~~~l~~lgl~~~~~~------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  126 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQ-NAVVDHRMEQLGITHYYKG------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI  126 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCC-SHHHHHHHHHHTCCEEECS------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcC-hHHHHHHHHHcCCccceeC------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            4999999999999999888 6777899999999988876      38999999999999999999999999999999999


Q ss_pred             HHcCCeEE
Q 032106           91 SKMGVTGI   98 (147)
Q Consensus        91 ~~~Gi~~i   98 (147)
                      +.+|+.++
T Consensus       127 ~~ag~~~~  134 (191)
T 3n1u_A          127 QQVGLGVA  134 (191)
T ss_dssp             HHSSEEEE
T ss_pred             HHCCCEEE
Confidence            99999874

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.59  E-value=1.3e-15  Score=112.06  Aligned_cols=93  Identities=10%  Similarity=0.023  Sum_probs=77.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCC--------CCCcHHH-HH-----
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSS--------WSHKTDH-FQ-----   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~--------~kp~~~~-~~-----   64 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++  |+..+ +.+   +....        +||++.. +.     
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~-~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~  151 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGM-DFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC  151 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEE-HHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence            3689999999999999999999999887 666677777  76554 443   22222        6888884 54     


Q ss_pred             --HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           65 --RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        65 --~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                        .+++++++.|++++||||+.+|+.+|+++|+.++
T Consensus       152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             HHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence              8899999999999999999999999999999886

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.58  E-value=5.7e-15  Score=105.81  Aligned_cols=84  Identities=13%  Similarity=0.209  Sum_probs=75.9

Q ss_pred             HHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q 032106           10 GILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDA   89 (147)
Q Consensus        10 ~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~   89 (147)
                      .+|+.|++.|++++|+||+. ...++.+++.+|+..+|..      .||++..|..+++++|++|++++||||+.+|+.+
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~-~~~~~~~l~~lgl~~~~~~------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~  132 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRK-AKLVEDRCATLGITHLYQG------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPV  132 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSC-CHHHHHHHHHHTCCEEECS------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHH
T ss_pred             HHHHHHHHCCCeEEEEeCCC-hHHHHHHHHHcCCceeecC------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            37999999999999999888 5667889999999877764      6899999999999999999999999999999999


Q ss_pred             HHHcCCeEEEE
Q 032106           90 VSKMGVTGILV  100 (147)
Q Consensus        90 a~~~Gi~~i~v  100 (147)
                      |+++|+.+++.
T Consensus       133 a~~ag~~~~~~  143 (188)
T 2r8e_A          133 MEKVGLSVAVA  143 (188)
T ss_dssp             HTTSSEEEECT
T ss_pred             HHHCCCEEEec
Confidence            99999987653

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.58  E-value=3.4e-16  Score=118.16  Aligned_cols=99  Identities=13%  Similarity=0.140  Sum_probs=81.5

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHH--H--HHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHc----CCCC
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIA--N--TFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRT----GVPF   74 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~--~--~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~----~~~~   74 (147)
                      +....+++.|+++|++ +|+||++. ...  .  .++...++..+|+.+   +.+...||++.+|..+++++    |++|
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~-~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~  225 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDN-TYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISK  225 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCS-EEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCG
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCc-cccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCc
Confidence            4666777789999999 99998873 332  2  123556777888774   55567899999999999999    9999


Q ss_pred             CcEEEEeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           75 NSMLFFDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        75 ~~~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ++++||||+. +|+.+|+++|+.+++|.++...
T Consensus       226 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~  258 (284)
T 2hx1_A          226 REILMVGDTLHTDILGGNKFGLDTALVLTGNTR  258 (284)
T ss_dssp             GGEEEEESCTTTHHHHHHHHTCEEEEESSSSSC
T ss_pred             ceEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            9999999996 8999999999999999998754

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.58  E-value=8.7e-15  Score=105.06  Aligned_cols=82  Identities=13%  Similarity=0.299  Sum_probs=75.2

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      +|+.|+++|++++|+||.. ...++.+++.+|+..+|+.+      ++|+..+..+++++|++|++++||||+.+|+.++
T Consensus        54 ~l~~L~~~g~~~~i~T~~~-~~~~~~~~~~lgl~~~f~~~------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~  126 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRK-TAIVERRAKSLGIEHLFQGR------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVI  126 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSC-CHHHHHHHHHHTCSEEECSC------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEECcC-hHHHHHHHHHcCCHHHhcCc------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHH
Confidence            8999999999999999888 67778999999999998863      6889999999999999999999999999999999


Q ss_pred             HHcCCeEEE
Q 032106           91 SKMGVTGIL   99 (147)
Q Consensus        91 ~~~Gi~~i~   99 (147)
                      +++|+.++.
T Consensus       127 ~~ag~~~~~  135 (189)
T 3mn1_A          127 RRVGLGMAV  135 (189)
T ss_dssp             HHSSEEEEC
T ss_pred             HHCCCeEEe
Confidence            999997553

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.57  E-value=5.4e-15  Score=118.18  Aligned_cols=95  Identities=15%  Similarity=0.220  Sum_probs=81.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCC--------hH---HHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHH
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPS--------PD---IANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~--------~~---~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~   69 (147)
                      ++||+.++|+.|+++|++++|+||...        ..   .++.+++.+|+.  |+.+   +.+...||++.+|..++++
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~  165 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ  165 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHH
Confidence            789999999999999999999998530        11   156778889985  7664   5566799999999999999


Q ss_pred             cC----CCCCcEEEEeCCc-----------------ccHHHHHHcCCeEEEE
Q 032106           70 TG----VPFNSMLFFDDED-----------------RNIDAVSKMGVTGILV  100 (147)
Q Consensus        70 ~~----~~~~~~v~VgDs~-----------------~Di~~a~~~Gi~~i~v  100 (147)
                      +|    ++|++|+||||+.                 .|+.+|+++|+.++..
T Consensus       166 l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p  217 (416)
T 3zvl_A          166 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP  217 (416)
T ss_dssp             SSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred             hCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence            98    9999999999997                 7999999999998754

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.56  E-value=1.1e-14  Score=106.71  Aligned_cols=83  Identities=13%  Similarity=0.240  Sum_probs=76.0

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      +|+.|+++|++++|+||.. ...++.+++.+|+..+|..+      |||+..++.+++++|++|++++||||+.+|+.++
T Consensus        84 ~L~~L~~~G~~l~I~T~~~-~~~~~~~l~~lgi~~~f~~~------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~  156 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRR-AKLLEDRANTLGITHLYQGQ------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVM  156 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSC-CHHHHHHHHHHTCCEEECSC------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCchhhccc------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHH
Confidence            7899999999999999887 67778999999999888862      8999999999999999999999999999999999


Q ss_pred             HHcCCeEEEE
Q 032106           91 SKMGVTGILV  100 (147)
Q Consensus        91 ~~~Gi~~i~v  100 (147)
                      +++|+.++..
T Consensus       157 ~~ag~~~a~~  166 (211)
T 3ij5_A          157 AQVGLSVAVA  166 (211)
T ss_dssp             TTSSEEEECT
T ss_pred             HHCCCEEEeC
Confidence            9999986643

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.56  E-value=2.4e-14  Score=103.65  Aligned_cols=83  Identities=14%  Similarity=0.241  Sum_probs=75.4

Q ss_pred             HHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHH
Q 032106           10 GILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDA   89 (147)
Q Consensus        10 ~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~   89 (147)
                      ..|+.|+++|++++|+||+. ...++.+++.+|+..+|..      .||++..+..++++++++|++++||||+.+|+.+
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~-~~~~~~~l~~lgi~~~~~~------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~  131 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRR-SQIVENRMKALGISLIYQG------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPV  131 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSC-CHHHHHHHHHTTCCEEECS------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHH
T ss_pred             HHHHHHHHCCCEEEEEECcC-HHHHHHHHHHcCCcEEeeC------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHH
Confidence            35999999999999999887 6777899999999988765      4899999999999999999999999999999999


Q ss_pred             HHHcCCeEEE
Q 032106           90 VSKMGVTGIL   99 (147)
Q Consensus        90 a~~~Gi~~i~   99 (147)
                      ++++|+.++.
T Consensus       132 ~~~ag~~va~  141 (195)
T 3n07_A          132 MEKVALRVCV  141 (195)
T ss_dssp             HTTSSEEEEC
T ss_pred             HHHCCCEEEE
Confidence            9999987553

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.56  E-value=7.2e-16  Score=117.84  Aligned_cols=104  Identities=13%  Similarity=0.086  Sum_probs=84.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHH-HH-HHHHhcC-cccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDI-AN-TFLEKLN-IKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~-~~-~~l~~~g-l~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++|++.++|+.|++.|+ ++|+||...... .. ..+..+| +..+|+.+   +.+...||++.+|+.+++++|++|++
T Consensus       156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e  234 (306)
T 2oyc_A          156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR  234 (306)
T ss_dssp             CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGG
T ss_pred             CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHH
Confidence            468999999999999999 999998873221 01 2233344 55666653   45567899999999999999999999


Q ss_pred             EEEEeCCc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           77 MLFFDDED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        77 ~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ++||||+. +|+.+|+++|+.+++|.+|....
T Consensus       235 ~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~  266 (306)
T 2oyc_A          235 TLMVGDRLETDILFGHRCGMTTVLTLTGVSRL  266 (306)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSCCH
T ss_pred             EEEECCCchHHHHHHHHCCCeEEEECCCCCCH
Confidence            99999996 99999999999999999987653

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.55  E-value=1.7e-15  Score=113.30  Aligned_cols=99  Identities=15%  Similarity=0.205  Sum_probs=79.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHH--HHHHHh-cCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIA--NTFLEK-LNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~--~~~l~~-~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .+||++.++|+.|+ +|+++ |+||.+. ...  ...+.. .++..+|+.+   +.+...||++.+|+.++++  ++|++
T Consensus       130 ~~~~~~~~~l~~L~-~g~~~-i~tn~~~-~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~  204 (263)
T 1zjj_A          130 LTYEKLKYATLAIR-NGATF-IGTNPDA-TLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE  204 (263)
T ss_dssp             CBHHHHHHHHHHHH-TTCEE-EESCCCS-EEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCc-cccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence            57999999999999 89998 9998873 221  112222 4455667664   4455689999999999999  99999


Q ss_pred             EEEEeCCc-ccHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDED-RNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ++||||+. +|+.+|+++|+.+++|.+|...
T Consensus       205 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~  235 (263)
T 1zjj_A          205 LWMVGDRLDTDIAFAKKFGMKAIMVLTGVSS  235 (263)
T ss_dssp             EEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             EEEECCChHHHHHHHHHcCCeEEEECCCCCC
Confidence            99999996 8999999999999999988654

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.54  E-value=2.6e-14  Score=101.47  Aligned_cols=81  Identities=14%  Similarity=0.248  Sum_probs=73.4

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      +|+.|+++|++++|+||+. ...++.+++.+|+. +|..      .|||+..+..+++++|+++++++||||+.+|+.++
T Consensus        47 ~l~~L~~~g~~~~i~T~~~-~~~~~~~~~~lgi~-~~~~------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~  118 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQ-NPVVAARARKLKIP-VLHG------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCF  118 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSC-CHHHHHHHHHHTCC-EEES------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCeEEEEECcC-hHHHHHHHHHcCCe-eEeC------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence            6899999999999999887 67778999999998 6654      38999999999999999999999999999999999


Q ss_pred             HHcCCeEEE
Q 032106           91 SKMGVTGIL   99 (147)
Q Consensus        91 ~~~Gi~~i~   99 (147)
                      +.+|+.+++
T Consensus       119 ~~ag~~v~~  127 (176)
T 3mmz_A          119 ALVGWPVAV  127 (176)
T ss_dssp             HHSSEEEEC
T ss_pred             HHCCCeEEC
Confidence            999987543

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.54  E-value=2e-14  Score=102.45  Aligned_cols=95  Identities=22%  Similarity=0.262  Sum_probs=79.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccccee-------------cCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEI-------------FSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~-------------~~~~kp~~~~~~~~~~~   69 (147)
                      .++|++.++|+.|+++|++++|+|++. ...++..++.+++..+|..+-.             ....++|+..+..++++
T Consensus        76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  154 (211)
T 1l7m_A           76 TPTEGAEETIKELKNRGYVVAVVSGGF-DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  154 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEEEE-HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEcCCc-HHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence            467999999999999999999999776 5666778888998777654210             01245789999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +|+.|++|++|||+.+|+.+|+.+|+.++
T Consensus       155 lgi~~~~~~~iGD~~~Di~~~~~ag~~~~  183 (211)
T 1l7m_A          155 EGINLEDTVAVGDGANDISMFKKAGLKIA  183 (211)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             cCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence            99999999999999999999999999743

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.54  E-value=1.1e-15  Score=111.27  Aligned_cols=102  Identities=15%  Similarity=0.156  Sum_probs=82.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEE---------------------------------EEcCCCChHHHHHHHHhcC-cccccc
Q 032106            3 SLYPHAKGILHALKDKGIDVA---------------------------------VASRSPSPDIANTFLEKLN-IKSMFV   48 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~---------------------------------i~S~~~~~~~~~~~l~~~g-l~~~f~   48 (147)
                      .++||+.++|+.|++.|++++                                 ++||.. .. ....++.++ +..+|+
T Consensus        87 ~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~-~~~~~~~~~~~~~~~~  164 (250)
T 2c4n_A           87 AYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-TH-GRGFYPACGALCAGIE  164 (250)
T ss_dssp             EEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SB-SSTTCBCHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CC-CCCeeecchHHHHHHH
Confidence            467899999999999999999                                 999765 22 233344444 444555


Q ss_pred             cc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHHHcCCeEEEECCCCCh
Q 032106           49 AK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        49 ~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ..   +.....||++..|+.+++++|++|++|++|||+ .+|+.+|+.+|+.+++|.++...
T Consensus       165 ~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~  226 (250)
T 2c4n_A          165 KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSS  226 (250)
T ss_dssp             HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             HHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCC
Confidence            42   455678999999999999999999999999999 69999999999999999988654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.50  E-value=5.7e-15  Score=110.26  Aligned_cols=103  Identities=18%  Similarity=0.141  Sum_probs=81.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHH--HHHHhcCcccccccc---ee-cCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIAN--TFLEKLNIKSMFVAK---EI-FSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~--~~l~~~gl~~~f~~~---~~-~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++|++.++++.| ..|+++ ++||........  ..++..++..+|+.+   +. +...||++.+|+.+++++|++|++
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e  214 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER  214 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence            4689999999999 788998 999876321110  022233455566653   44 677899999999999999999999


Q ss_pred             EEEEeCCc-ccHHHHHHcCCeEEEECCCCChH
Q 032106           77 MLFFDDED-RNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        77 ~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ++||||+. +|+.+|+.+|+.+++|.++....
T Consensus       215 ~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~  246 (271)
T 1vjr_A          215 MAMVGDRLYTDVKLGKNAGIVSILVLTGETTP  246 (271)
T ss_dssp             EEEEESCHHHHHHHHHHHTCEEEEESSSSCCH
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCH
Confidence            99999995 99999999999999999987653

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.50  E-value=2.8e-14  Score=101.92  Aligned_cols=101  Identities=16%  Similarity=0.207  Sum_probs=80.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc--cccccc---------eecCCCCCcHHHHHHHH-HHc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK--SMFVAK---------EIFSSWSHKTDHFQRIH-SRT   70 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~--~~f~~~---------~~~~~~kp~~~~~~~~~-~~~   70 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+.  .+|...         ..+...+|.+..+...+ +.+
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  160 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGL-SESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK  160 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCc-HHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence            478999999999999999999999887 67778999999994  355421         11344677766555555 556


Q ss_pred             CCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           71 GVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        71 ~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |++|++++||||+.+|+.++ ++|+.++++.++..
T Consensus       161 ~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~  194 (219)
T 3kd3_A          161 GLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEH  194 (219)
T ss_dssp             GGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSS
T ss_pred             CCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCc
Confidence            99999999999999999998 58999888876644

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.49  E-value=1.6e-13  Score=104.06  Aligned_cols=89  Identities=20%  Similarity=0.261  Sum_probs=76.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|+++|++++|+||++ ...++.+++.+|+..+|+.+  ++.  +|    ..++++++.. ++|+||||
T Consensus       163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~i--~~~--~K----~~~~~~l~~~-~~~~~vGD  232 (287)
T 3a1c_A          163 TLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIAEV--LPH--QK----SEEVKKLQAK-EVVAFVGD  232 (287)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECSC--CTT--CH----HHHHHHHTTT-CCEEEEEC
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhCCceeeeec--ChH--HH----HHHHHHHhcC-CeEEEEEC
Confidence            689999999999999999999999887 67778999999999999863  322  33    6778889998 99999999


Q ss_pred             CcccHHHHHHcCCeEEEECC
Q 032106           83 EDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~v~~  102 (147)
                      +.+|+.+|+++|+. +.+..
T Consensus       233 s~~Di~~a~~ag~~-v~~~~  251 (287)
T 3a1c_A          233 GINDAPALAQADLG-IAVGS  251 (287)
T ss_dssp             TTTCHHHHHHSSEE-EEECC
T ss_pred             CHHHHHHHHHCCee-EEeCC
Confidence            99999999999998 44443

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.45  E-value=1.3e-15  Score=109.61  Aligned_cols=88  Identities=13%  Similarity=0.036  Sum_probs=77.9

Q ss_pred             CCchhHHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCccc-ccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            3 SLYPHAKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKS-MFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      .++||+.++|+.|+++ |++++|+||+. ...++..++.+|+.. ||+               ..+++++++.|++++||
T Consensus        75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~-~~~~~~~l~~~~l~~~~f~---------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A           75 EPLPGAVEAVKEMASLQNTDVFICTSPI-KMFKYCPYEKYAWVEKYFG---------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             CBCTTHHHHHHHHHHSTTEEEEEEECCC-SCCSSHHHHHHHHHHHHHC---------------GGGGGGEEECSCSTTSC
T ss_pred             CcCcCHHHHHHHHHhcCCCeEEEEeCCc-cchHHHHHHHhchHHHhch---------------HHHHHHhccCCccEEEE
Confidence            5899999999999999 99999999887 455577899999988 886               45778899999999999


Q ss_pred             eCCccc----HHHHH-HcCCeEEEECCCCCh
Q 032106           81 DDEDRN----IDAVS-KMGVTGILVGNGVNL  106 (147)
Q Consensus        81 gDs~~D----i~~a~-~~Gi~~i~v~~~~~~  106 (147)
                      ||+..|    +.+|+ ++|+.++++.++++.
T Consensus       139 gDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~  169 (197)
T 1q92_A          139 ADLLIDDRPDITGAEPTPSWEHVLFTACHNQ  169 (197)
T ss_dssp             CSEEEESCSCCCCSCSSCSSEEEEECCTTTT
T ss_pred             CcccccCCchhhhcccCCCceEEEecCcccc
Confidence            999999    99999 999999999886553

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.43  E-value=3.7e-13  Score=95.35  Aligned_cols=79  Identities=20%  Similarity=0.329  Sum_probs=68.2

Q ss_pred             HHHHHHHHCCCeEEEEcCCCChHHHHHHHH--hcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccH
Q 032106           10 GILHALKDKGIDVAVASRSPSPDIANTFLE--KLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNI   87 (147)
Q Consensus        10 ~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~--~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di   87 (147)
                      .+|+.|+++|++++|+||.   ..++.+++  .+++. +|..      .++|+..+..+++++|++|++++||||+.+|+
T Consensus        43 ~~L~~Lk~~Gi~~~I~Tg~---~~~~~~l~~l~lgi~-~~~g------~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi  112 (168)
T 3ewi_A           43 IGISLLKKSGIEVRLISER---ACSKQTLSALKLDCK-TEVS------VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDE  112 (168)
T ss_dssp             HHHHHHHHTTCEEEEECSS---CCCHHHHHTTCCCCC-EECS------CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred             HHHHHHHHCCCEEEEEeCc---HHHHHHHHHhCCCcE-EEEC------CCChHHHHHHHHHHcCcChHHEEEEeCCHhHH
Confidence            3699999999999999977   23567888  67775 5432      47899999999999999999999999999999


Q ss_pred             HHHHHcCCeEE
Q 032106           88 DAVSKMGVTGI   98 (147)
Q Consensus        88 ~~a~~~Gi~~i   98 (147)
                      .+++.+|+.++
T Consensus       113 ~~~~~ag~~~a  123 (168)
T 3ewi_A          113 ECLKRVGLSAV  123 (168)
T ss_dssp             HHHHHSSEEEE
T ss_pred             HHHHHCCCEEE
Confidence            99999999854

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.14  E-value=1.4e-14  Score=109.02  Aligned_cols=88  Identities=20%  Similarity=0.270  Sum_probs=77.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|++.|++++++||.+ ...++.+++.+|+.++|+.+  .      |..+..++++++..+++++||||
T Consensus       136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~-~~~~~~~~~~~gl~~~f~~~--~------p~~k~~~~~~l~~~~~~~~~VGD  206 (263)
T 2yj3_A          136 VPRPNLKDYLEKLKNEGLKIIILSGDK-EDKVKELSKELNIQEYYSNL--S------PEDKVRIIEKLKQNGNKVLMIGD  206 (263)
Confidence            589999999999999999999999887 67778999999999999862  2      44567889999999999999999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.+|+.+++++|+.+.+
T Consensus       207 ~~~D~~aa~~Agv~va~  223 (263)
T 2yj3_A          207 GVNDAAALALADVSVAM  223 (263)
Confidence            99999999999976443

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.40  E-value=1.3e-13  Score=101.76  Aligned_cols=99  Identities=13%  Similarity=0.147  Sum_probs=75.9

Q ss_pred             CchhHHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCccccccc------ceecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            4 LYPHAKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKSMFVA------KEIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~------~~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++++.+.+..|++. |+++ ++|+... ......+...++..+|..      .+.....||++.+|..+++++|+++++
T Consensus       132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~  209 (271)
T 2x4d_A          132 SYQNMNNAFQVLMELEKPVL-ISLGKGR-YYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ  209 (271)
T ss_dssp             CHHHHHHHHHHHHHCSSCCE-EEECCCS-EEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred             CHHHHHHHHHHHHhcCCCeE-EEEcCCc-ccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence            367888888888887 8888 6775552 221222333444444432      144566899999999999999999999


Q ss_pred             EEEEeCCc-ccHHHHHHcCCeEEEECCCC
Q 032106           77 MLFFDDED-RNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        77 ~v~VgDs~-~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +++|||+. +|+.+|+.+|+.+++|.++.
T Consensus       210 ~i~iGD~~~nDi~~a~~aG~~~~~v~~g~  238 (271)
T 2x4d_A          210 AVMIGDDIVGDVGGAQRCGMRALQVRTGK  238 (271)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEEcCCC
Confidence            99999998 99999999999999999873

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.39  E-value=1.4e-13  Score=97.27  Aligned_cols=97  Identities=19%  Similarity=0.246  Sum_probs=75.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce----ecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE----IFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|++.|++++|+||+. ...++.. +.+|+..+|+.+.    .+...+|.+.....+++.+  .|++++
T Consensus        79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i  154 (201)
T 4ap9_A           79 NVSPEARELVETLREKGFKVVLISGSF-EEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFIL  154 (201)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEEEE-TTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEE
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCc-HHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEE
Confidence            578999999999999999999999877 5555677 8899887754421    1112455555566677777  899999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +|||+.+|+.+|+.+|+. +++..+.
T Consensus       155 ~iGD~~~Di~~~~~ag~~-v~~~~~~  179 (201)
T 4ap9_A          155 AMGDGYADAKMFERADMG-IAVGREI  179 (201)
T ss_dssp             EEECTTCCHHHHHHCSEE-EEESSCC
T ss_pred             EEeCCHHHHHHHHhCCce-EEECCCC
Confidence            999999999999999997 5555543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.39  E-value=6.3e-15  Score=105.53  Aligned_cols=88  Identities=13%  Similarity=0.075  Sum_probs=75.2

Q ss_pred             CCchhHHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            3 SLYPHAKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      .++||+.++|+.|+++ |++++|+||+. ...++..++.+|+   |+.+  ++.         .+++++|+.|++|+|||
T Consensus        73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~-~~~~~~~l~~~gl---f~~i--~~~---------~~~~~~~~~~~~~~~vg  137 (193)
T 2i7d_A           73 EPIPGALDAVREMNDLPDTQVFICTSPL-LKYHHCVGEKYRW---VEQH--LGP---------QFVERIILTRDKTVVLG  137 (193)
T ss_dssp             CBCTTHHHHHHHHHTSTTEEEEEEECCC-SSCTTTHHHHHHH---HHHH--HCH---------HHHTTEEECSCGGGBCC
T ss_pred             ccCcCHHHHHHHHHhCCCCeEEEEeCCC-hhhHHHHHHHhCc---hhhh--cCH---------HHHHHcCCCcccEEEEC
Confidence            6899999999999999 99999999887 4556788888888   6652  221         37889999999999999


Q ss_pred             CCccc----HHHHH-HcCCeEEEECCCCC
Q 032106           82 DEDRN----IDAVS-KMGVTGILVGNGVN  105 (147)
Q Consensus        82 Ds~~D----i~~a~-~~Gi~~i~v~~~~~  105 (147)
                      |+..|    +.+|+ ++|+.++++.++.+
T Consensus       138 Ds~~dD~~~i~~A~~~aG~~~i~~~~~~~  166 (193)
T 2i7d_A          138 DLLIDDKDTVRGQEETPSWEHILFTCCHN  166 (193)
T ss_dssp             SEEEESSSCCCSSCSSCSSEEEEECCGGG
T ss_pred             CchhhCcHHHhhcccccccceEEEEeccC
Confidence            99999    99999 99999999987543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.35  E-value=4.5e-12  Score=94.44  Aligned_cols=52  Identities=19%  Similarity=0.206  Sum_probs=47.1

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHHHcCCeEEEECCCCCh
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ..||++..|+.+++++|++++++++|||+ .+|+.+|+.+|+.++++.+|...
T Consensus       181 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~  233 (266)
T 3pdw_A          181 IGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTK  233 (266)
T ss_dssp             CSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC---
T ss_pred             cCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence            37999999999999999999999999999 79999999999999999988654

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.34  E-value=1.1e-11  Score=92.26  Aligned_cols=55  Identities=16%  Similarity=0.176  Sum_probs=50.1

Q ss_pred             cCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHHHcCCeEEEECCCCChH
Q 032106           53 FSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        53 ~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ....||++.+|+.+++++|+++++++||||+ .+|+.+|+++|+.+++|.+|....
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~  238 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTR  238 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCT
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCH
Confidence            3347999999999999999999999999999 599999999999999999987643

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.33  E-value=1.1e-11  Score=92.46  Aligned_cols=53  Identities=15%  Similarity=0.109  Sum_probs=49.4

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCC-cccHHHHHHcCCeEEEECCCCChH
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDE-DRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs-~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ..||++.+|+.+++++|++|++++||||+ .+|+.+|+++|+.+++|.+|....
T Consensus       180 ~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~  233 (264)
T 3epr_A          180 IGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTV  233 (264)
T ss_dssp             CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCG
T ss_pred             CCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCCh
Confidence            37999999999999999999999999999 699999999999999999987643

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.29  E-value=9.6e-12  Score=92.50  Aligned_cols=87  Identities=15%  Similarity=0.260  Sum_probs=70.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .++||+.++|+.|++.|++++|+||.. ...++.+++.+|+..+|+.+  ++.  .+....+...+.+     +++||||
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~-~~~~~~~~~~~gl~~~f~~~--~~~--~k~~~~k~~~~~~-----~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDN-RFVAKWVAEELGLDDYFAEV--LPH--EKAEKVKEVQQKY-----VTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECSC--CGG--GHHHHHHHHHTTS-----CEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCChhHhHhc--CHH--HHHHHHHHHHhcC-----CEEEEeC
Confidence            478999999999999999999999887 77788999999999999863  222  3455555554443     7899999


Q ss_pred             CcccHHHHHHcCCeEEE
Q 032106           83 EDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~   99 (147)
                      +.+|+.+++.+|+.+.+
T Consensus       214 ~~nDi~~~~~Ag~~va~  230 (280)
T 3skx_A          214 GVNDAPALAQADVGIAI  230 (280)
T ss_dssp             TTTTHHHHHHSSEEEEC
T ss_pred             CchhHHHHHhCCceEEe
Confidence            99999999999975443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.26  E-value=7.6e-13  Score=95.87  Aligned_cols=112  Identities=15%  Similarity=0.149  Sum_probs=88.1

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ++||+.++|+.|++. +.++|+|++. +..++.+++.+++..+|+.+   +.+...|   ..|.+.++.+|.++++||+|
T Consensus        69 ~RPgv~efL~~l~~~-~~i~I~Tss~-~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~viv  143 (195)
T 2hhl_A           69 KRPHVDEFLQRMGQL-FECVLFTASL-AKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVIIV  143 (195)
T ss_dssp             ECTTHHHHHHHHHHH-SEEEEECSSC-HHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEEEE
T ss_pred             eCcCHHHHHHHHHcC-CeEEEEcCCC-HHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEEEE
Confidence            579999999999998 9999999888 78889999999999999874   3333323   56788889999999999999


Q ss_pred             eCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhc
Q 032106           81 DDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~  121 (147)
                      ||+..++.++.++|+.+..+.....-.++. .+..|.+...
T Consensus       144 DDs~~~~~~~~~ngi~i~~~~~~~~D~eL~-~L~~~L~~l~  183 (195)
T 2hhl_A          144 DNSPASYIFHPENAVPVQSWFDDMTDTELL-DLIPFFEGLS  183 (195)
T ss_dssp             ESCGGGGTTCGGGEEECCCCSSCTTCCHHH-HHHHHHHHHH
T ss_pred             ECCHHHhhhCccCccEEeeecCCCChHHHH-HHHHHHHHHH
Confidence            999999999999999876554322222333 3555655544

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.23  E-value=2.8e-11  Score=91.28  Aligned_cols=93  Identities=8%  Similarity=0.091  Sum_probs=78.5

Q ss_pred             CchhHHHHHHHHHHC-CCeEEEEcCC---------------------CChHHHHHHHHhcCccccccc------------
Q 032106            4 LYPHAKGILHALKDK-GIDVAVASRS---------------------PSPDIANTFLEKLNIKSMFVA------------   49 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~-g~~l~i~S~~---------------------~~~~~~~~~l~~~gl~~~f~~------------   49 (147)
                      .++++.++|+.|++. |+++++.|+.                     . ...+...++.+|+..+|..            
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKN-LLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHH-HHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHH-HHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            568999999999988 9999999965                     3 3445677888888777643            


Q ss_pred             -ceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           50 -KEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        50 -~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                       .+..+..++|+..+..+++++|++++++++|||+.+|+.+++.+|+.+
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~  250 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGY  250 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEE
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEE
Confidence             255667899999999999999999999999999999999999999653

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.14  E-value=4.6e-12  Score=90.63  Aligned_cols=91  Identities=16%  Similarity=0.184  Sum_probs=77.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|.+. +.++|+|++. +..++.+++.++..++|...   +.+...|   ..|.+.++.+|.++++|++
T Consensus        55 ~~rPg~~efL~~l~~~-~~i~I~T~~~-~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~vi  129 (181)
T 2ght_A           55 LKRPHVDEFLQRMGEL-FECVLFTASL-AKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVLI  129 (181)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSC-HHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEEE
T ss_pred             EeCCCHHHHHHHHHhC-CCEEEEcCCC-HHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEEE
Confidence            3689999999999998 9999999888 78889999999999998774   2222222   5577788899999999999


Q ss_pred             EeCCcccHHHHHHcCCeEE
Q 032106           80 FDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i   98 (147)
                      |||+..++.++.++|+.+.
T Consensus       130 vdDs~~~~~~~~~ngi~i~  148 (181)
T 2ght_A          130 LDNSPASYVFHPDNAVPVA  148 (181)
T ss_dssp             ECSCGGGGTTCTTSBCCCC
T ss_pred             EeCCHHHhccCcCCEeEec
Confidence            9999999999999999853

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.09  E-value=4e-10  Score=92.23  Aligned_cols=98  Identities=17%  Similarity=0.136  Sum_probs=80.2

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc-C-------------cccccccceecCCCCCcHHH--------
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL-N-------------IKSMFVAKEIFSSWSHKTDH--------   62 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~-g-------------l~~~f~~~~~~~~~kp~~~~--------   62 (147)
                      -|++..+|+.|++.| +++++||++ ...++.+++.+ |             +.+||+. .++.+.||....        
T Consensus       248 dp~l~~~L~~Lr~~G-KlfLiTNS~-~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~-vI~~A~KP~FF~~~~pfr~V  324 (555)
T 2jc9_A          248 DGKLPLLLSRMKEVG-KVFLATNSD-YKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDL-ILVDARKPLFFGEGTVLRQV  324 (555)
T ss_dssp             CTHHHHHHHHHHHHS-EEEEECSSC-HHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSE-EEESCCTTGGGTTCCCEEEE
T ss_pred             ChHHHHHHHHHHHcC-CEEEEeCCC-hHHHHHHHHHhcCCCccccccccccchhhhCCE-EEEeCCCCCcccCCCcceEe
Confidence            478999999999999 999999998 67778888876 6             3457776 344556666443        


Q ss_pred             --------------------------HHHHHHHcCCCCCcEEEEeCCcc-cHHHHH-HcCCeEEEECCCCC
Q 032106           63 --------------------------FQRIHSRTGVPFNSMLFFDDEDR-NIDAVS-KMGVTGILVGNGVN  105 (147)
Q Consensus        63 --------------------------~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~-~~Gi~~i~v~~~~~  105 (147)
                                                +..+++.+|+.+++++||||... ||..++ .+||.+++|.....
T Consensus       325 d~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPELe  395 (555)
T 2jc9_A          325 DTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELA  395 (555)
T ss_dssp             ETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTHH
T ss_pred             ecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEechh
Confidence                                      58899999999999999999988 999997 89999999977543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.04  E-value=2.4e-10  Score=85.91  Aligned_cols=105  Identities=17%  Similarity=0.185  Sum_probs=72.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC--hHHHHHHHHhcCcc--cccccceec-CCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS--PDIANTFLEKLNIK--SMFVAKEIF-SSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~--~~~~~~~l~~~gl~--~~f~~~~~~-~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||+.++|+.|+++|++++|+||+..  ...+...++.+|+.  .+|+.+-.. ...||.+  ...++ ..+.  ..+
T Consensus       101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~--~~~~~-~~~~--~~~  175 (258)
T 2i33_A          101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKEKGKEK--RRELV-SQTH--DIV  175 (258)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTCCSSHH--HHHHH-HHHE--EEE
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCCCCcHH--HHHHH-HhCC--Cce
Confidence            5789999999999999999999998762  22345677888997  566653111 1134443  33333 2333  449


Q ss_pred             EEEeCCcccHHHHH-------H---------cCCeEEEECCCCChHHHHHHH
Q 032106           78 LFFDDEDRNIDAVS-------K---------MGVTGILVGNGVNLGALRQGL  113 (147)
Q Consensus        78 v~VgDs~~Di~~a~-------~---------~Gi~~i~v~~~~~~~~~~~~l  113 (147)
                      +||||+.+|+.+|+       +         +|+.+|.++++.- ..|..++
T Consensus       176 l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y-~~w~~~~  226 (258)
T 2i33_A          176 LFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY-GDWEGAL  226 (258)
T ss_dssp             EEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS-SHHHHHH
T ss_pred             EEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc-chhhhhh
Confidence            99999999999983       4         7999999988743 3444443

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.00  E-value=2.7e-09  Score=78.31  Aligned_cols=99  Identities=11%  Similarity=0.134  Sum_probs=78.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc---------c-cc----------------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---------V-AK----------------------   50 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f---------~-~~----------------------   50 (147)
                      .+-|.+.++|+.|+++|++++++|++. ...+..+++.+++..++         + ..                      
T Consensus        22 ~i~~~~~~~l~~l~~~g~~~~i~TGr~-~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~  100 (227)
T 1l6r_A           22 LISTKAIESIRSAEKKGLTVSLLSGNV-IPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT  100 (227)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCC-cHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence            356789999999999999999999887 66678888888876421         1 00                      


Q ss_pred             ---------------------------------------------eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcc
Q 032106           51 ---------------------------------------------EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDR   85 (147)
Q Consensus        51 ---------------------------------------------~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~   85 (147)
                                                                   +..+...+|...++.++++++++++++++|||+.+
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n  180 (227)
T 1l6r_A          101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN  180 (227)
T ss_dssp             SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence                                                         11133468899999999999999999999999999


Q ss_pred             cHHHHHHcCCeEEEECCC
Q 032106           86 NIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        86 Di~~a~~~Gi~~i~v~~~  103 (147)
                      |+.+++.+|+. +.+.++
T Consensus       181 D~~m~~~ag~~-va~~n~  197 (227)
T 1l6r_A          181 DMPMFQLPVRK-ACPANA  197 (227)
T ss_dssp             GHHHHTSSSEE-EECTTS
T ss_pred             hHHHHHHcCce-EEecCc
Confidence            99999999986 445443

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.94  E-value=7.2e-09  Score=75.85  Aligned_cols=94  Identities=13%  Similarity=0.234  Sum_probs=73.2

Q ss_pred             hhHHHHHHHHH-HC-CCeE-----------EEEc-CCCChHHHHHHHHhcCccccccc------ceecCCCCCcHHHHHH
Q 032106            6 PHAKGILHALK-DK-GIDV-----------AVAS-RSPSPDIANTFLEKLNIKSMFVA------KEIFSSWSHKTDHFQR   65 (147)
Q Consensus         6 pgv~~~L~~L~-~~-g~~l-----------~i~S-~~~~~~~~~~~l~~~gl~~~f~~------~~~~~~~kp~~~~~~~   65 (147)
                      +.+.++++.++ +. |+.+           ++++ +.. ...++.+++.++  .+|+.      .+..+..+||+..++.
T Consensus        84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~  160 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETIN-VETVREIINELN--LNLVAVDSGFAIHVKKPWINKGSGIEK  160 (231)
T ss_dssp             SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSC-HHHHHHHHHHTT--CSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCC-HHHHHHHHHhcC--CcEEEEecCcEEEEecCCCChHHHHHH
Confidence            67888888887 65 6654           6666 434 566677777765  33433      2566678999999999


Q ss_pred             HHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           66 IHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        66 ~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +++++|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus       161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~  197 (231)
T 1wr8_A          161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA  197 (231)
T ss_dssp             HHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             HHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence            9999999999999999999999999999998 556554

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.89  E-value=3.9e-08  Score=73.33  Aligned_cols=57  Identities=12%  Similarity=0.191  Sum_probs=47.0

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHHH
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALR  110 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~  110 (147)
                      +..+...+|+..++.+++++|++++++++|||+.+|+.+++.+|+.   |.++...++..
T Consensus       190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k  246 (279)
T 4dw8_A          190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMG---VAMGNAQEPVK  246 (279)
T ss_dssp             EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHH
T ss_pred             EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcE---EEcCCCcHHHH
Confidence            5666788999999999999999999999999999999999999954   33444444433

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.84  E-value=9.7e-10  Score=82.84  Aligned_cols=84  Identities=14%  Similarity=0.131  Sum_probs=63.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh---HHHHHHHHhcCcccccc-cceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP---DIANTFLEKLNIKSMFV-AKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~---~~~~~~l~~~gl~~~f~-~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+.+.   ......|+.+|+..+++ .+..-.....|...+..+.+. |.  .-++
T Consensus       101 ~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy--~iv~  177 (262)
T 3ocu_A          101 RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GY--EIVL  177 (262)
T ss_dssp             EECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TE--EEEE
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhc-CC--CEEE
Confidence            57899999999999999999999988643   57778899999987663 221112234566777766665 43  3499


Q ss_pred             EEeCCcccHHH
Q 032106           79 FFDDEDRNIDA   89 (147)
Q Consensus        79 ~VgDs~~Di~~   89 (147)
                      +|||+..|+.+
T Consensus       178 ~vGD~~~Dl~~  188 (262)
T 3ocu_A          178 YVGDNLDDFGN  188 (262)
T ss_dssp             EEESSGGGGCS
T ss_pred             EECCChHHhcc
Confidence            99999999997

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.81  E-value=1.3e-09  Score=81.96  Aligned_cols=98  Identities=15%  Similarity=0.179  Sum_probs=69.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh---HHHHHHHHhcCcccccc-cceecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP---DIANTFLEKLNIKSMFV-AKEIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~---~~~~~~l~~~gl~~~f~-~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .++||+.++|+.|+++|++++|+||+...   ......|+.+|+..+++ .+..-+....|...+..+.+ .|.  .-++
T Consensus       101 ~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~-~gy--~iv~  177 (260)
T 3pct_A          101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVED-MGY--DIVL  177 (260)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHT-TTC--EEEE
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHh-cCC--CEEE
Confidence            57899999999999999999999988633   57778899999987664 21111122345555555544 344  4499


Q ss_pred             EEeCCcccHHH--------HHH---------cCCeEEEECCC
Q 032106           79 FFDDEDRNIDA--------VSK---------MGVTGILVGNG  103 (147)
Q Consensus        79 ~VgDs~~Di~~--------a~~---------~Gi~~i~v~~~  103 (147)
                      +|||+..|+.+        +++         .|-+.|.++.+
T Consensus       178 ~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (260)
T 3pct_A          178 FVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT  219 (260)
T ss_dssp             EEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             EECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence            99999999987        333         56677776654

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.76  E-value=2.8e-08  Score=69.76  Aligned_cols=83  Identities=17%  Similarity=0.294  Sum_probs=57.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCC---CCh-HHHHHHHHh-cCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRS---PSP-DIANTFLEK-LNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~---~~~-~~~~~~l~~-~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++||+.++|+.|++. ++++|+||+   ... ......+.. +++..+|+.+  +...+.          .+    ++|
T Consensus        69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i--~~~~~~----------~l----~~~  131 (180)
T 3bwv_A           69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFV--FCGRKN----------II----LAD  131 (180)
T ss_dssp             CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEE--ECSCGG----------GB----CCS
T ss_pred             CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEE--EeCCcC----------ee----ccc
Confidence            6899999999999985 999999987   311 111233444 5665666552  222110          12    779


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+..|+.  .++| .++++.+++.
T Consensus       132 l~ieDs~~~i~--~aaG-~~i~~~~~~~  156 (180)
T 3bwv_A          132 YLIDDNPKQLE--IFEG-KSIMFTASHN  156 (180)
T ss_dssp             EEEESCHHHHH--HCSS-EEEEECCGGG
T ss_pred             EEecCCcchHH--HhCC-CeEEeCCCcc
Confidence            99999999985  4579 9999987643

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.75  E-value=4e-08  Score=82.42  Aligned_cols=86  Identities=17%  Similarity=0.246  Sum_probs=70.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ++.|++.++|+.|++.|++++++|+.+ ...++.+.+.+|++.+|..  .  .+..|....+.+.+    . ++++||||
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~-~~~a~~ia~~lgi~~~~~~--~--~P~~K~~~v~~l~~----~-~~v~~vGD  526 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIAE--V--LPHQKSEEVKKLQA----K-EVVAFVGD  526 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECS--C--CTTCHHHHHHHHTT----T-CCEEEEEC
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCEEEEe--C--CHHhHHHHHHHHhh----C-CeEEEEeC
Confidence            578999999999999999999999776 7888999999999877654  2  13456666655543    3 78999999


Q ss_pred             CcccHHHHHHcCCeEE
Q 032106           83 EDRNIDAVSKMGVTGI   98 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i   98 (147)
                      +.||+.+.+.+|+...
T Consensus       527 g~ND~~al~~A~vgia  542 (645)
T 3j08_A          527 GINDAPALAQADLGIA  542 (645)
T ss_dssp             SSSCHHHHHHSSEEEE
T ss_pred             CHhHHHHHHhCCEEEE
Confidence            9999999999997644

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.73  E-value=1e-07  Score=71.44  Aligned_cols=93  Identities=12%  Similarity=0.167  Sum_probs=66.8

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc-----Cccccccc---ceecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL-----NIKSMFVA---KEIFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~-----gl~~~f~~---~~~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      +++++.+++..+....+++.+.. .  +.....+++.+     ++.-.+..   .+..+...+|+..++.+++++|++++
T Consensus       143 ~~~~~~~~~~~~~~~~~ki~~~~-~--~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~  219 (290)
T 3dnp_A          143 FVESLSDLLMDEPVSAPVIEVYT-E--HDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD  219 (290)
T ss_dssp             ECSCHHHHHHHSCCCCSEEEEEC-C--GGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred             ccCCHHHHHhcCCCCceEEEEeC-C--HHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence            35667777877777778885543 3  23334545442     12111111   25666788999999999999999999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEE
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ++++|||+.+|+.+++.+|+.+++
T Consensus       220 ~~i~~GD~~NDi~m~~~ag~~vam  243 (290)
T 3dnp_A          220 DVVAIGHQYDDLPMIELAGLGVAM  243 (290)
T ss_dssp             GEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             HEEEECCchhhHHHHHhcCCEEEe
Confidence            999999999999999999986443

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.73  E-value=5.5e-08  Score=72.15  Aligned_cols=95  Identities=13%  Similarity=0.228  Sum_probs=68.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCC-----hHHHH-HHHHhcCc-------------cccccc---------------
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPS-----PDIAN-TFLEKLNI-------------KSMFVA---------------   49 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~-----~~~~~-~~l~~~gl-------------~~~f~~---------------   49 (147)
                      ..+++.++++.+++.|+.+.++|+...     ..... ..+..+++             ..+|..               
T Consensus        86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~  165 (261)
T 2rbk_A           86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPS  165 (261)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGG
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHHh
Confidence            457889999999988898888875431     01111 22222221             111110               


Q ss_pred             -------------ceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           50 -------------KEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        50 -------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                                   ++..+..++|+..+..+++++|++++++++|||+.+|+.+++.+|+.++
T Consensus       166 ~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~  227 (261)
T 2rbk_A          166 IPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVA  227 (261)
T ss_dssp             STTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEE
Confidence                         1345668999999999999999999999999999999999999998544

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.67  E-value=1.5e-08  Score=75.73  Aligned_cols=83  Identities=12%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             HHCCCeEEEEcCCCChHHHHHHHHhcC--ccccccc-------ceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCccc
Q 032106           16 KDKGIDVAVASRSPSPDIANTFLEKLN--IKSMFVA-------KEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRN   86 (147)
Q Consensus        16 ~~~g~~l~i~S~~~~~~~~~~~l~~~g--l~~~f~~-------~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~D   86 (147)
                      +..+++++++++..  . .+.+++.++  +..+|..       ++.....++|+..++.+++++|++++++++|||+.+|
T Consensus       143 ~~~~~ki~i~~~~~--~-~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD  219 (271)
T 1rlm_A          143 DDVLFKFSLNLPDE--Q-IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGND  219 (271)
T ss_dssp             CSCEEEEEEECCGG--G-HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred             CCceEEEEEEcCHH--H-HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHH
Confidence            34578888888543  2 344444443  3333432       2556678999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEEECC
Q 032106           87 IDAVSKMGVTGILVGN  102 (147)
Q Consensus        87 i~~a~~~Gi~~i~v~~  102 (147)
                      +.+++.+|+.+ .+..
T Consensus       220 ~~m~~~ag~~v-a~~n  234 (271)
T 1rlm_A          220 AEMLKMARYSF-AMGN  234 (271)
T ss_dssp             HHHHHHCSEEE-ECTT
T ss_pred             HHHHHHcCCeE-EeCC
Confidence            99999999964 3444

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.63  E-value=3.5e-07  Score=67.66  Aligned_cols=48  Identities=27%  Similarity=0.331  Sum_probs=43.2

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      +..+...+|+..++.+++++|++++++++|||+.+|+.+++.+|+.++
T Consensus       193 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va  240 (274)
T 3fzq_A          193 EIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIA  240 (274)
T ss_dssp             EEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEE
T ss_pred             EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEE
Confidence            456668899999999999999999999999999999999999996544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.63  E-value=2.7e-07  Score=68.65  Aligned_cols=46  Identities=11%  Similarity=0.337  Sum_probs=39.1

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCe
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~   96 (147)
                      +..+....|+..++.+++++|++++++++|||+.+|+++++.+|+.
T Consensus       190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~  235 (279)
T 3mpo_A          190 EVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG  235 (279)
T ss_dssp             EEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE
T ss_pred             EEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce
Confidence            4444466799999999999999999999999999999999999965

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.58  E-value=1.9e-07  Score=79.19  Aligned_cols=86  Identities=17%  Similarity=0.275  Sum_probs=69.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ++.|++.++|+.|++.|++++++|+.+ ...++.+.+.+|++.+|..  ..  +..|....+.+.++     ++++||||
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~-~~~a~~ia~~lgi~~~~~~--~~--P~~K~~~v~~l~~~-----~~v~~vGD  604 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIAE--VL--PHQKSEEVKKLQAK-----EVVAFVGD  604 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECS--CC--TTCHHHHHHHHTTT-----CCEEEEEC
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCcEEEcc--CC--HHHHHHHHHHHhcC-----CeEEEEEC
Confidence            578999999999999999999999766 7888999999999876654  21  33566665555433     78999999


Q ss_pred             CcccHHHHHHcCCeEE
Q 032106           83 EDRNIDAVSKMGVTGI   98 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i   98 (147)
                      +.||+.+.+.+|+...
T Consensus       605 g~ND~~al~~A~vgia  620 (723)
T 3j09_A          605 GINDAPALAQADLGIA  620 (723)
T ss_dssp             SSTTHHHHHHSSEEEE
T ss_pred             ChhhHHHHhhCCEEEE
Confidence            9999999999997643

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.56  E-value=5e-08  Score=74.02  Aligned_cols=91  Identities=12%  Similarity=0.091  Sum_probs=62.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------------eec------CCCCCcHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------------EIF------SSWSHKTDHF   63 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------------~~~------~~~kp~~~~~   63 (147)
                      .+.||+.++++.|+++|++++|+|++. ...++.+++++|+......+             ..+      ...|+.+..-
T Consensus       141 ~l~~g~~e~i~~l~~~gi~v~ivSgg~-~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k  219 (297)
T 4fe3_A          141 MLKEGYENFFGKLQQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK  219 (297)
T ss_dssp             CBCBTHHHHHHHHHHTTCCEEEEEEEE-HHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHcCCeEEEEeCCc-HHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHH
Confidence            578999999999999999999999777 88899999999985321000             000      0122222221


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcccHHHHHHcC
Q 032106           64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG   94 (147)
Q Consensus        64 ~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~G   94 (147)
                      ......+.-....++||||+.+|+.+++.+.
T Consensus       220 ~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~  250 (297)
T 4fe3_A          220 NTDYFSQLKDNSNIILLGDSQGDLRMADGVA  250 (297)
T ss_dssp             CHHHHHHTTTCCEEEEEESSGGGGGTTTTCS
T ss_pred             HHHHHHhhccCCEEEEEeCcHHHHHHHhCcc
Confidence            2222334445678999999999999987543

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.52  E-value=2.4e-07  Score=78.72  Aligned_cols=87  Identities=15%  Similarity=0.140  Sum_probs=67.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+-|++.++|+.|++.|++++++|+.+ ...++.+.+.+|++++|...        .|+--..+++.+.-....++||||
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~-~~~a~~ia~~lgi~~v~a~~--------~P~~K~~~v~~l~~~g~~V~~vGD  624 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDS-KRTAEAVAGTLGIKKVVAEI--------MPEDKSRIVSELKDKGLIVAMAGD  624 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSC-HHHHHHHHHHHTCCCEECSC--------CHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCCEEEEec--------CHHHHHHHHHHHHhcCCEEEEEEC
Confidence            467899999999999999999999766 78889999999998766541        223233333333334577999999


Q ss_pred             CcccHHHHHHcCCeEE
Q 032106           83 EDRNIDAVSKMGVTGI   98 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i   98 (147)
                      +.||+.+.+.+|+...
T Consensus       625 G~ND~paL~~AdvGIA  640 (736)
T 3rfu_A          625 GVNDAPALAKADIGIA  640 (736)
T ss_dssp             SSTTHHHHHHSSEEEE
T ss_pred             ChHhHHHHHhCCEEEE
Confidence            9999999999998743

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.51  E-value=1.8e-07  Score=74.06  Aligned_cols=89  Identities=16%  Similarity=0.236  Sum_probs=63.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc------------c-cc----ee-----cCCCCCcH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF------------V-AK----EI-----FSSWSHKT   60 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f------------~-~~----~~-----~~~~kp~~   60 (147)
                      +++||+.++++.|+++|++++|||++. ..+++.+.+.+|+..-+            + ..    ..     +.....|.
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~-~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~  299 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASF-IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV  299 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCc-HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence            479999999999999999999999887 88889999998763211            1 00    00     11122355


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHc
Q 032106           61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKM   93 (147)
Q Consensus        61 ~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~   93 (147)
                      ..++.++.. ......++++|||.+|+.+.+..
T Consensus       300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~  331 (385)
T 4gxt_A          300 QTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEF  331 (385)
T ss_dssp             HHHHHHTCC-TTEECCSEEEECSGGGHHHHHHC
T ss_pred             HHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcC
Confidence            555554432 23445699999999999999974

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.48  E-value=2.6e-07  Score=69.34  Aligned_cols=86  Identities=14%  Similarity=0.128  Sum_probs=58.4

Q ss_pred             HCCCeEEEEc-CCCChHHHHHHHHhcC--ccccccc---ceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           17 DKGIDVAVAS-RSPSPDIANTFLEKLN--IKSMFVA---KEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        17 ~~g~~l~i~S-~~~~~~~~~~~l~~~g--l~~~f~~---~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      ...+++.++. ........+.+.+.++  +.-.+..   .+......+|...++.+++++|++++++++|||+.+|+.++
T Consensus       164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml  243 (283)
T 3dao_A          164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEML  243 (283)
T ss_dssp             SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred             cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            5578888883 2221112223334443  1111111   25666678899999999999999999999999999999999


Q ss_pred             HHcCCeEEEECCC
Q 032106           91 SKMGVTGILVGNG  103 (147)
Q Consensus        91 ~~~Gi~~i~v~~~  103 (147)
                      +.+|+. +.+.++
T Consensus       244 ~~ag~~-vam~na  255 (283)
T 3dao_A          244 QNAGIS-YAVSNA  255 (283)
T ss_dssp             HHSSEE-EEETTS
T ss_pred             HhCCCE-EEcCCC
Confidence            999965 444443

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.42  E-value=8.4e-07  Score=66.57  Aligned_cols=46  Identities=15%  Similarity=0.254  Sum_probs=42.4

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCe
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~   96 (147)
                      +..+...+|...++.+++++|++++++++|||+.+|+++++.+|+.
T Consensus       202 ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~  247 (285)
T 3pgv_A          202 EVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKG  247 (285)
T ss_dssp             EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred             EEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCE
Confidence            5666678899999999999999999999999999999999999954

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.39  E-value=4.1e-06  Score=67.66  Aligned_cols=99  Identities=13%  Similarity=0.103  Sum_probs=74.0

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc---------CcccccccceecCCCCCc----------------
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL---------NIKSMFVAKEIFSSWSHK----------------   59 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~~kp~----------------   59 (147)
                      -|.+..+|+.|+++|.+++++||++ -..++..+..+         ++.+|||.+- +.+.||.                
T Consensus       188 ~~~l~~~L~~lr~~GKklFLiTNS~-~~y~~~~M~y~~~~~~~~g~dWrdlFDvVI-v~A~KP~FF~~~~~~~~v~~~~g  265 (470)
T 4g63_A          188 EKEVVEGLKHFIRYGKKIFILTNSE-YSYSKLLLDYALSPFLDKGEHWQGLFEFVI-TLANKPRFFYDNLRFLSVNPENG  265 (470)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSC-HHHHHHHHHHHTGGGSCTTCCGGGGCSEEE-ESCCTTHHHHSCCCEEEECTTTC
T ss_pred             CHhHHHHHHHHHHcCCeEEEeeCCC-chHHHHHHHhhcccCCCCCCChhhhcCEEE-ECCCCCCcccCCCcceEEECCCC
Confidence            3788999999999999999999998 77777777652         4566887641 1111111                


Q ss_pred             ---------------HHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHH-cCCeEEEECCCCC
Q 032106           60 ---------------TDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSK-MGVTGILVGNGVN  105 (147)
Q Consensus        60 ---------------~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~-~Gi~~i~v~~~~~  105 (147)
                                     ......+.+-+|....+++||||+.. ||..+++ .||+|++|-....
T Consensus       266 ~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL~  328 (470)
T 4g63_A          266 TMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELG  328 (470)
T ss_dssp             CEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTHH
T ss_pred             cccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHHH
Confidence                           12235666777888899999999988 9877776 6999999987654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.38  E-value=5.1e-07  Score=66.83  Aligned_cols=63  Identities=10%  Similarity=0.010  Sum_probs=48.8

Q ss_pred             HHHHHhcCccccccc--ceecCCCCCcHHHHHHHHHHcCCCC--CcEEEEeCCcccHHHHHHcCCeEE
Q 032106           35 NTFLEKLNIKSMFVA--KEIFSSWSHKTDHFQRIHSRTGVPF--NSMLFFDDEDRNIDAVSKMGVTGI   98 (147)
Q Consensus        35 ~~~l~~~gl~~~f~~--~~~~~~~kp~~~~~~~~~~~~~~~~--~~~v~VgDs~~Di~~a~~~Gi~~i   98 (147)
                      ...+...++.-++..  .+..+. ++|+..++.+++++|+++  +++++|||+.+|+.+++.+|+.++
T Consensus       152 ~~~l~~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va  218 (259)
T 3zx4_A          152 LEALEAVGLEWTHGGRFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVY  218 (259)
T ss_dssp             HHHHHHTTCEEEECSSSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred             HHHHHHCCcEEEecCceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence            334444444333322  255666 899999999999999999  999999999999999999998743

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.36  E-value=2.2e-06  Score=64.92  Aligned_cols=47  Identities=17%  Similarity=0.220  Sum_probs=42.9

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +..+...+|...++.+++++|++++++++|||+.+|+++++.+|+.+
T Consensus       221 ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~v  267 (304)
T 3l7y_A          221 DIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSY  267 (304)
T ss_dssp             EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEE
T ss_pred             EEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeE
Confidence            56666788999999999999999999999999999999999999653

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.35  E-value=6e-06  Score=60.77  Aligned_cols=48  Identities=15%  Similarity=0.272  Sum_probs=42.2

Q ss_pred             ecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           52 IFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        52 ~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      .....-.|...++.+++++|++++++++|||+.+|+.+++.+|+.+++
T Consensus       177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam  224 (258)
T 2pq0_A          177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM  224 (258)
T ss_dssp             EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred             EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence            444466788899999999999999999999999999999999997663

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.32  E-value=4.7e-07  Score=70.84  Aligned_cols=50  Identities=22%  Similarity=0.345  Sum_probs=43.0

Q ss_pred             CCCcHHHHHHHHHHc----------------------CC-----CCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCC
Q 032106           56 WSHKTDHFQRIHSRT----------------------GV-----PFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~----------------------~~-----~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      .||.+.+|+.+++.+                      |+     ++++++||||+.. ||.+|+++|+.+++|.+|..
T Consensus       245 GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          245 GKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY  322 (352)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred             cCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence            799999999886654                      22     6799999999995 99999999999999998754

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.32  E-value=3.7e-06  Score=73.58  Aligned_cols=92  Identities=16%  Similarity=0.122  Sum_probs=68.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-------------------------ceecCC--
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-------------------------KEIFSS--   55 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-------------------------~~~~~~--   55 (147)
                      .+.|++.++|+.|+++|++++++|+.+ ...+..+.+.+|+......                         ...+..  
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~-~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~  681 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDN-KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE  681 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCC-HHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence            467999999999999999999999666 8888999999999653211                         012222  


Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ++.|....+.+.+    ..+.++||||+.||+.+.+.+++...+
T Consensus       682 P~~K~~~v~~l~~----~g~~v~~~GDG~ND~~alk~Advgiam  721 (995)
T 3ar4_A          682 PSHKSKIVEYLQS----YDEITAMTGDGVNDAPALKKAEIGIAM  721 (995)
T ss_dssp             SSHHHHHHHHHHT----TTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred             HHHHHHHHHHHHH----CCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence            2334444444433    247899999999999999999997554

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.30  E-value=1.5e-07  Score=68.45  Aligned_cols=127  Identities=15%  Similarity=0.105  Sum_probs=90.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-ccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      ..||+.++|+.|. .++.++|.|++. ...++.+++.++..+ +|...   +.+..   ....|.+-++.+|.++++||+
T Consensus        60 ~RPgl~eFL~~l~-~~yeivI~Tas~-~~ya~~vl~~LDp~~~~f~~rl~R~~c~~---~~g~y~KdL~~Lgrdl~~vIi  134 (204)
T 3qle_A           60 KRPGADYFLGYLS-QYYEIVLFSSNY-MMYSDKIAEKLDPIHAFVSYNLFKEHCVY---KDGVHIKDLSKLNRDLSKVII  134 (204)
T ss_dssp             ECTTHHHHHHHHT-TTEEEEEECSSC-HHHHHHHHHHTSTTCSSEEEEECGGGSEE---ETTEEECCGGGSCSCGGGEEE
T ss_pred             eCCCHHHHHHHHH-hCCEEEEEcCCc-HHHHHHHHHHhCCCCCeEEEEEEecceeE---ECCeeeecHHHhCCChHHEEE
Confidence            4699999999998 679999999777 888999999999874 77753   22211   222356677888999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhcc-chhhHHHHHHhhcCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNT-SQKNKQKWISKFSQK  137 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~  137 (147)
                      |+|+..........||......... -.++. .+..|.+..+. ..+|.-..+++|.++
T Consensus       135 IDDsp~~~~~~p~N~I~I~~~~~~~-D~eL~-~L~~~L~~L~~~~~~DVR~~L~~~~~~  191 (204)
T 3qle_A          135 IDTDPNSYKLQPENAIPMEPWNGEA-DDKLV-RLIPFLEYLATQQTKDVRPILNSFEDK  191 (204)
T ss_dssp             EESCTTTTTTCGGGEEECCCCCSSC-CCHHH-HHHHHHHHHHHTCCSCSHHHHTTSSCG
T ss_pred             EECCHHHHhhCccCceEeeeECCCC-ChhHH-HHHHHHHHHhhcChHHHHHHHHHhcCC
Confidence            9999998876666777655443222 22444 35577777654 356666677777754

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.27  E-value=3.2e-06  Score=62.47  Aligned_cols=47  Identities=11%  Similarity=0.144  Sum_probs=42.0

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +......+|...++.+++++|++++++++|||+.+|+.+++.+|+.+
T Consensus       187 ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~v  233 (268)
T 3r4c_A          187 DVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGV  233 (268)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeE
Confidence            34455778999999999999999999999999999999999999663

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=98.10  E-value=1.6e-05  Score=69.89  Aligned_cols=94  Identities=13%  Similarity=0.061  Sum_probs=65.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc----------------------------cc-----
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF----------------------------VA-----   49 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f----------------------------~~-----   49 (147)
                      .+.|+++++|+.|+++|+++.++|+.+ ...+..+.+.+|+...-                            +.     
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~  677 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDH-PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD  677 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCC-HHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence            467999999999999999999999666 88888999999986210                            00     


Q ss_pred             ------------c--eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           50 ------------K--EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        50 ------------~--~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                                  .  ..+..  ..|..-..+.+.+.-....++|+||+.||+.+.+.+++...+
T Consensus       678 ~~~~~l~~~~~~~~~~v~ar--~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm  739 (1028)
T 2zxe_A          678 LSTEVLDDILHYHTEIVFAR--TSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM  739 (1028)
T ss_dssp             CCHHHHHHHHHHCSEEEEES--CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             CCHHHHHHHHhhCCcEEEEE--cCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe
Confidence                        0  02222  223333223222222236799999999999999999998654

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.05  E-value=6.9e-06  Score=61.65  Aligned_cols=48  Identities=17%  Similarity=0.336  Sum_probs=42.4

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      ..-.|...++.+++.+|++++++++|||+.+|+.+++.+|+ .+.+.++
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~  260 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA  260 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence            35578889999999999999999999999999999999999 5666554

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.96  E-value=1.1e-05  Score=59.92  Aligned_cols=47  Identities=15%  Similarity=0.246  Sum_probs=42.6

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +..+...+|+..+..+++++|++++++++|||+.+|+.+++.+|+.+
T Consensus       183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v  229 (268)
T 1nf2_A          183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV  229 (268)
T ss_dssp             EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE
T ss_pred             EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEE
Confidence            55666778999999999999999999999999999999999999853

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.96  E-value=1.9e-05  Score=68.60  Aligned_cols=92  Identities=13%  Similarity=0.127  Sum_probs=68.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-cc----------------------ceecCC--CC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VA----------------------KEIFSS--WS   57 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~----------------------~~~~~~--~k   57 (147)
                      .+.|+++++++.|++.|+++.++|+-+ +..+..+.+++|+.... +.                      ...+..  +.
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~-~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~  613 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDA-VGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ  613 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSC-HHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCC-HHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence            478999999999999999999999555 88889999999996311 00                      012222  23


Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      .|....+.+.+ .|   ..+.|+||+.||..+.+.+++...+
T Consensus       614 ~K~~iV~~Lq~-~g---~~Vam~GDGvNDapaLk~AdvGIAm  651 (920)
T 1mhs_A          614 HKYNVVEILQQ-RG---YLVAMTGDGVNDAPSLKKADTGIAV  651 (920)
T ss_dssp             HHHHHHHHHHT-TT---CCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHHh-CC---CeEEEEcCCcccHHHHHhCCcCccc
Confidence            34445554433 34   6799999999999999999998554

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.93  E-value=1.3e-05  Score=60.00  Aligned_cols=52  Identities=19%  Similarity=0.350  Sum_probs=44.0

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +..+..-+|...++.+++.+|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus       191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~  242 (282)
T 1rkq_A          191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVDNA  242 (282)
T ss_dssp             EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEecCC
Confidence            3444566899999999999999999999999999999999999984 455443

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.93  E-value=8.8e-06  Score=62.49  Aligned_cols=95  Identities=12%  Similarity=0.097  Sum_probs=61.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-ceecC-------------------CCCCc---
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-KEIFS-------------------SWSHK---   59 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-~~~~~-------------------~~kp~---   59 (147)
                      .+.|++.++|+.|++ |+.++++|+.. ...+...++.+++..++.. ...+.                   ..++.   
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~  180 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSY-TQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL  180 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEE-HHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCc-eEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence            468999999999999 99999999665 4555666666666333211 00000                   00111   


Q ss_pred             ------------HHHHH----------HHHHHcCCCCCc----EEEEeCCcccHHHHHHc----CCeEEE
Q 032106           60 ------------TDHFQ----------RIHSRTGVPFNS----MLFFDDEDRNIDAVSKM----GVTGIL   99 (147)
Q Consensus        60 ------------~~~~~----------~~~~~~~~~~~~----~v~VgDs~~Di~~a~~~----Gi~~i~   99 (147)
                                  +..|.          +...-.++++++    +++|||+.+|+.+++.+    |+.+++
T Consensus       181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam  250 (332)
T 1y8a_A          181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF  250 (332)
T ss_dssp             HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence                        12222          111111667888    99999999999999999    998654

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.91  E-value=5.4e-05  Score=66.58  Aligned_cols=94  Identities=13%  Similarity=0.034  Sum_probs=64.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc----------------------------cc-----
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF----------------------------VA-----   49 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f----------------------------~~-----   49 (147)
                      .+-|+++++|+.|+++|+++.++|+.+ ...+..+.+.+|+..--                            +.     
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~  682 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDH-PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD  682 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence            467999999999999999999999766 77888999999984210                            00     


Q ss_pred             ---------c-----eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           50 ---------K-----EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        50 ---------~-----~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                               .     ..+...  .|..-..+.+.+.-....++|+||+.||+.+-+.+|+...+
T Consensus       683 ~~~~~l~~~~~~~~~~v~ar~--~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM  744 (1034)
T 3ixz_A          683 MDPSELVEALRTHPEMVFART--SPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM  744 (1034)
T ss_pred             CCHHHHHHHHHhCCceEEEec--CHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe
Confidence                     0     011111  22222233333322335699999999999999999987554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.81  E-value=2.6e-05  Score=59.22  Aligned_cols=52  Identities=15%  Similarity=0.219  Sum_probs=45.0

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      +..+..-+|...++.+++.+|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus       217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na  268 (301)
T 2b30_A          217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA  268 (301)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred             EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC
Confidence            4555567899999999999999999999999999999999999985 455543

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.81  E-value=2e-05  Score=57.99  Aligned_cols=51  Identities=16%  Similarity=0.238  Sum_probs=44.6

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      +..+..-+|...+..+++.+|++++++++|||+.+|+.+++.+|+. +.+.+
T Consensus       155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~n  205 (244)
T 1s2o_A          155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN  205 (244)
T ss_dssp             EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred             EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcC
Confidence            5666677999999999999999999999999999999999998885 44443

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.78  E-value=1.9e-05  Score=68.43  Aligned_cols=92  Identities=11%  Similarity=0.161  Sum_probs=66.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc-c--------------cc---------ceecCCC--
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM-F--------------VA---------KEIFSSW--   56 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~-f--------------~~---------~~~~~~~--   56 (147)
                      .+.|++.++++.|++.|+++.++|+-+ +..+..+.+++|+..- +              +.         ...+...  
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~-~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSC-HHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCC-hHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            467999999999999999999999555 8888999999999531 1              00         0112222  


Q ss_pred             CCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           57 SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        57 kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      ..|....+.+.+ .|   ..+.|+||+.||..+.+.+++...+
T Consensus       567 ~~K~~iV~~lq~-~g---~~Vam~GDGvNDapaLk~AdvGIAm  605 (885)
T 3b8c_A          567 EHKYEIVKKLQE-RK---HIVGMTGDGVNDAPALKKADIGIAV  605 (885)
T ss_dssp             HHHHHHHHHHHH-TT---CCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred             HHHHHHHHHHHH-CC---CeEEEEcCCchhHHHHHhCCEeEEe
Confidence            224444444443 23   6799999999999999999987544

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=97.67  E-value=0.00054  Score=50.92  Aligned_cols=105  Identities=18%  Similarity=0.192  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHC-CCeEEEEcCCCChHHHHHHHHhcCcccccccceecCC-CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc
Q 032106            8 AKGILHALKDK-GIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS-WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR   85 (147)
Q Consensus         8 v~~~L~~L~~~-g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~   85 (147)
                      +..+|.....+ +..-++||++.-.. .-..+=.+||..+|+...++.. .-.|..+|++|.+++| +....++|||+..
T Consensus       164 a~k~L~~i~sr~~~vNVLVTs~qLVP-aLaK~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~e  241 (274)
T 3geb_A          164 SLKALNLINSRPNCVNVLVTTTQLIP-ALAKVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVE  241 (274)
T ss_dssp             HHHHHHHHHHSTTEEEEEEESSCHHH-HHHHHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHH
T ss_pred             HHHHHHhhccCCceeEEEEecCchHH-HHHHHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHH
Confidence            34455555444 57778888665322 2234446899999988644444 3468899999999998 4588899999999


Q ss_pred             cHHHHHHcCCeEEEECCCCChHHHHHHHH
Q 032106           86 NIDAVSKMGVTGILVGNGVNLGALRQGLT  114 (147)
Q Consensus        86 Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~  114 (147)
                      .-++|+.++++++-+....+...+..+++
T Consensus       242 Ee~AAk~~n~PFwrI~~h~Dl~~l~~al~  270 (274)
T 3geb_A          242 EEQGAKKHNMPFWRISCHADLEALRHALE  270 (274)
T ss_dssp             HHHHHHHTTCCEEECCSHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCeEEeecCccHHHHHHhhc
Confidence            99999999999999977655555555543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.57  E-value=7e-05  Score=55.10  Aligned_cols=52  Identities=10%  Similarity=-0.028  Sum_probs=45.2

Q ss_pred             eecCCCCCcHHHHHHHHHHcCC-CCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGV-PFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~-~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +..+ .-.|...++.+++.+++ .++++++|||+.+|+.+.+.+|+. +.+.++.
T Consensus       173 ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~  225 (249)
T 2zos_A          173 TVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLK  225 (249)
T ss_dssp             EEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCC
T ss_pred             EEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCC
Confidence            5566 67899999999999998 999999999999999999999986 5666554

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.49  E-value=7.9e-05  Score=55.65  Aligned_cols=53  Identities=11%  Similarity=0.068  Sum_probs=46.9

Q ss_pred             eecCCCCCcHHHHHHHHHHcC-CCCCc--EEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTG-VPFNS--MLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~-~~~~~--~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +.....-+|...+..+++.+| +.+++  +++|||+.+|+.+.+.+|+. +.+.++.
T Consensus       182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~  237 (275)
T 1xvi_A          182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLN  237 (275)
T ss_dssp             EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC
T ss_pred             EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCC
Confidence            566667789999999999999 99999  99999999999999999985 7776665

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.27  E-value=0.00013  Score=57.47  Aligned_cols=80  Identities=11%  Similarity=0.145  Sum_probs=59.3

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-ccccceecCCCCCcHHHHHHHHHHc-CCCCCcEEEEe
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MFVAKEIFSSWSHKTDHFQRIHSRT-GVPFNSMLFFD   81 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~kp~~~~~~~~~~~~-~~~~~~~v~Vg   81 (147)
                      +.||+.++|+.|. .++.++|.|++. +..++.+++.++... ||... .+.... .+..|.+-+..+ |.+++++|+|+
T Consensus        76 ~RPg~~eFL~~l~-~~yeivI~Tas~-~~yA~~vl~~LDp~~~~f~~r-i~sr~~-~g~~~~KdL~~L~~~dl~~viiiD  151 (372)
T 3ef0_A           76 FRPGLAQFLQKIS-ELYELHIYTMGT-KAYAKEVAKIIDPTGKLFQDR-VLSRDD-SGSLAQKSLRRLFPCDTSMVVVID  151 (372)
T ss_dssp             ECTTHHHHHHHHH-TTEEEEEECSSC-HHHHHHHHHHHCTTSCSSSSC-EECTTT-SSCSSCCCGGGTCSSCCTTEEEEE
T ss_pred             ECcCHHHHHHHHh-cCcEEEEEeCCc-HHHHHHHHHHhccCCceeeeE-EEEecC-CCCcceecHHHhcCCCCceEEEEe
Confidence            4799999999998 679999999777 888899999999887 77641 221100 011233445555 89999999999


Q ss_pred             CCcccH
Q 032106           82 DEDRNI   87 (147)
Q Consensus        82 Ds~~Di   87 (147)
                      |+..-.
T Consensus       152 d~~~~~  157 (372)
T 3ef0_A          152 DRGDVW  157 (372)
T ss_dssp             SCSGGG
T ss_pred             CCHHHc
Confidence            998643

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.19  E-value=0.0004  Score=53.67  Aligned_cols=39  Identities=18%  Similarity=0.388  Sum_probs=34.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL   41 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~   41 (147)
                      |.+||++.++++.|+.+|+.++|||.+. ..+++.+.+.+
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~-~~~v~~~a~~~  180 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAH-EELVRMVAADP  180 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHTCG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHhhc
Confidence            5789999999999999999999999777 78888888763

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=96.99  E-value=0.00018  Score=55.45  Aligned_cols=95  Identities=15%  Similarity=0.060  Sum_probs=66.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc----c-ee---cC-CCCCcHHHHHHHHHHc----
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA----K-EI---FS-SWSHKTDHFQRIHSRT----   70 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~----~-~~---~~-~~kp~~~~~~~~~~~~----   70 (147)
                      ..||+.++|+.|.+. +.++|.|.+. +..+..++..++....+..    . +.   ++ ..+.....|.+-+..+    
T Consensus       165 ~RP~l~eFL~~l~~~-yeivIfTas~-~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~  242 (320)
T 3shq_A          165 MRPYLHEFLTSAYED-YDIVIWSATS-MRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY  242 (320)
T ss_dssp             BCTTHHHHHHHHHHH-EEEEEECSSC-HHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred             eCCCHHHHHHHHHhC-CEEEEEcCCc-HHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence            469999999999855 9999999776 8889999999987665321    0 11   11 0111122244444555    


Q ss_pred             -CCCCCcEEEEeCCcccHHHHHHcCCeEEEE
Q 032106           71 -GVPFNSMLFFDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        71 -~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                       |.+++++|+|+|++.-.......|+.....
T Consensus       243 p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~  273 (320)
T 3shq_A          243 KQYNSSNTIMFDDIRRNFLMNPKSGLKIRPF  273 (320)
T ss_dssp             TTCCGGGEEEEESCGGGGTTSGGGEEECCCC
T ss_pred             CCCChhHEEEEeCChHHhccCcCceEEeCeE
Confidence             889999999999999887776777665433

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.66  E-value=0.0044  Score=48.24  Aligned_cols=87  Identities=11%  Similarity=0.122  Sum_probs=56.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC---hHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS---PDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++++||+..   ...++.+.+.+|+.--.+  +++....+-....    .    ....+++
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~--~i~ts~~~~~~~~----~----~~~~v~v   98 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL--QIIQSHTPYKSLV----N----KYSRILA   98 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG--GEECTTGGGGGGT----T----TCSEEEE
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh--hEeehHHHHHHHH----h----cCCEEEE
Confidence            4689999999999999999999998752   233333333688863223  3433322222211    1    2367888


Q ss_pred             EeCCcccHHHHHHcCCeEEEE
Q 032106           80 FDDEDRNIDAVSKMGVTGILV  100 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v  100 (147)
                      ||-. .-.+.++.+|+..+..
T Consensus        99 iG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           99 VGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             ESST-THHHHHHHHTCSEEEE
T ss_pred             ECCH-HHHHHHHhCCCeEecc
Confidence            8865 5567788899987753

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=96.35  E-value=0.0058  Score=41.62  Aligned_cols=75  Identities=17%  Similarity=0.122  Sum_probs=45.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCC--hHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPS--PDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~--~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      +.|++.++|+.|+++|+.++|+|+++.  ...+...++.+|+..  +.   +....|....   ........+.--+||+
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~--~~---I~~n~P~~~~---~~~~~~rK~~~~~fID   96 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF--YA---ANKDYPEEER---DHQGFSRKLKADLFID   96 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC--SE---ESSSSTTC------CCSCCSSCCCSEEEC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe--EE---EEcCCchhhh---cchhhcCCcCCCEEee
Confidence            568999999999999999999997751  223345667777752  22   1112232111   1111122345578899


Q ss_pred             CCccc
Q 032106           82 DEDRN   86 (147)
Q Consensus        82 Ds~~D   86 (147)
                      |....
T Consensus        97 DR~~~  101 (142)
T 2obb_A           97 DRNVG  101 (142)
T ss_dssp             TTSTT
T ss_pred             ccccC
Confidence            97653

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.18  E-value=0.015  Score=42.76  Aligned_cols=48  Identities=15%  Similarity=0.282  Sum_probs=40.9

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC----CcccHHHHHHcCCeEEEEC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD----EDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD----s~~Di~~a~~~Gi~~i~v~  101 (147)
                      +.....-.|...++.+   +|+++++++.|||    +.+|+.+.+.+|...+.+.
T Consensus       190 eI~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~  241 (262)
T 2fue_A          190 DVFPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV  241 (262)
T ss_dssp             EEEETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred             EEecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec
Confidence            5555566788888888   8999999999999    9999999999998767773

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=95.85  E-value=0.0054  Score=49.19  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=55.8

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc-ccccceecCCCCCcHHHHHHHHHH-cCCCCCcEEEEe
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS-MFVAKEIFSSWSHKTDHFQRIHSR-TGVPFNSMLFFD   81 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~kp~~~~~~~~~~~-~~~~~~~~v~Vg   81 (147)
                      ..||+.++|+.|. ..+.++|.|.+. +..+..+++.++... ||..- .+..... ...|.+-+.+ +|.+.+.+|+|+
T Consensus        84 ~RPgl~eFL~~ls-~~yEivIfTas~-~~YA~~Vl~~LDp~~~~f~~R-l~sRd~c-g~~~~KdL~~ll~rdl~~vvIID  159 (442)
T 3ef1_A           84 FRPGLAQFLQKIS-ELYELHIYTMGT-KAYAKEVAKIIDPTGKLFQDR-VLSRDDS-GSLAQKSLRRLFPCDTSMVVVID  159 (442)
T ss_dssp             ECTTHHHHHHHHT-TTEEEEEECSSC-HHHHHHHHHHHCTTSTTTTTC-EECTTTS-SCSSCCCGGGTCSSCCTTEEEEE
T ss_pred             eCCCHHHHHHHHh-CCcEEEEEcCCC-HHHHHHHHHHhccCCccccce-EEEecCC-CCceeeehHHhcCCCcceEEEEE
Confidence            4699999999998 569999999776 888999999999877 67651 1111000 0112222443 388889999999


Q ss_pred             CCcc
Q 032106           82 DEDR   85 (147)
Q Consensus        82 Ds~~   85 (147)
                      |+..
T Consensus       160 d~p~  163 (442)
T 3ef1_A          160 DRGD  163 (442)
T ss_dssp             SCSG
T ss_pred             CCHH
Confidence            9985

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=95.79  E-value=0.031  Score=41.19  Aligned_cols=84  Identities=18%  Similarity=0.228  Sum_probs=52.0

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCC--ChHHHHHHHHhcCcc-cccccceecCCCCCcHHHHHHHHHHcCCCCCcEE-E
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSP--SPDIANTFLEKLNIK-SMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSML-F   79 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~--~~~~~~~~l~~~gl~-~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v-~   79 (147)
                      ++|++.++|+.|+++|++++++||+.  ........++.+|+. ..++.  .+..    .......+++ ..+ .+++ +
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~--ii~~----~~~~~~~l~~-~~~-~~v~~~  102 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADK--IISS----GMITKEYIDL-KVD-GGIVAY  102 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGG--EEEH----HHHHHHHHHH-HCC-SEEEEE
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhh--EEcH----HHHHHHHHHh-hcC-CcEEEE
Confidence            57899999999999999999999732  244556678888887 55543  2211    2222222322 122 2677 7


Q ss_pred             EeCCcccHHHHHHcCCe
Q 032106           80 FDDEDRNIDAVSKMGVT   96 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~   96 (147)
                      +|.. .....++.+|+.
T Consensus       103 lg~~-~l~~~l~~~G~~  118 (284)
T 2hx1_A          103 LGTA-NSANYLVSDGIK  118 (284)
T ss_dssp             ESCH-HHHHTTCBTTEE
T ss_pred             ecCH-HHHHHHHHCCCe
Confidence            8764 344455555653

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.65  E-value=0.012  Score=42.72  Aligned_cols=44  Identities=11%  Similarity=0.098  Sum_probs=36.6

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHc--CCeEEE
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKM--GVTGIL   99 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~--Gi~~i~   99 (147)
                      +..+..-.|...++.+++++|     +++|||+.+|+.+.+.+  |..+++
T Consensus       153 ei~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam  198 (239)
T 1u02_A          153 ELRVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV  198 (239)
T ss_dssp             EEECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE
T ss_pred             EEEcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE
Confidence            455556678899999999888     99999999999999999  876443

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=95.65  E-value=0.044  Score=40.00  Aligned_cols=85  Identities=15%  Similarity=0.171  Sum_probs=51.7

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHH--HHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEe
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDI--ANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFD   81 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~--~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~Vg   81 (147)
                      ++|++.++|+.|+++|++++++||+.....  ....++.+|+....+.  .+.    ........+++.. ...+++++|
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~--i~~----~~~~~~~~l~~~~-~~~~v~viG   90 (263)
T 1zjj_A           18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI--IIT----SGLATRLYMSKHL-DPGKIFVIG   90 (263)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG--EEE----HHHHHHHHHHHHS-CCCCEEEES
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh--EEe----cHHHHHHHHHHhC-CCCEEEEEc
Confidence            458999999999999999999998763222  2233445677533332  221    1223333344332 336788888


Q ss_pred             CCcccHHHHHHcCCe
Q 032106           82 DEDRNIDAVSKMGVT   96 (147)
Q Consensus        82 Ds~~Di~~a~~~Gi~   96 (147)
                      .. .....++..|+.
T Consensus        91 ~~-~l~~~l~~~G~~  104 (263)
T 1zjj_A           91 GE-GLVKEMQALGWG  104 (263)
T ss_dssp             CH-HHHHHHHHHTSC
T ss_pred             CH-HHHHHHHHcCCe
Confidence            74 456666666763

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.37  E-value=0.0059  Score=44.39  Aligned_cols=49  Identities=14%  Similarity=0.293  Sum_probs=38.9

Q ss_pred             eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC----CcccHHHHHHcCCeEEEECC
Q 032106           51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD----EDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        51 ~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD----s~~Di~~a~~~Gi~~i~v~~  102 (147)
                      +.....-.|...++.+   +|+++++++.|||    +.+|+.+.+.+|...+.+..
T Consensus       181 eI~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N  233 (246)
T 2amy_A          181 DVFPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  233 (246)
T ss_dssp             EEEETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             EEecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence            5555566778888888   8999999999999    99999999999876677654

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=95.03  E-value=0.26  Score=35.00  Aligned_cols=97  Identities=16%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCccc
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRN   86 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~D   86 (147)
                      ++..+|..+++.+-++++++-.+....++.+.+.++++  +.. ..+... -.....-.-++.-|+    -++|||+.. 
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~-~~~~~~-~e~~~~i~~l~~~G~----~vvVG~~~~-  152 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKE-FLFSSE-DEITTLISKVKTENI----KIVVSGKTV-  152 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEE-EEECSG-GGHHHHHHHHHHTTC----CEEEECHHH-
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEE-EEeCCH-HHHHHHHHHHHHCCC----eEEECCHHH-
Confidence            56777888888888999999666555667777778875  221 111111 112222223344455    368998877 


Q ss_pred             HHHHHHcCCeEEEECCCCChHHHHHHHH
Q 032106           87 IDAVSKMGVTGILVGNGVNLGALRQGLT  114 (147)
Q Consensus        87 i~~a~~~Gi~~i~v~~~~~~~~~~~~l~  114 (147)
                      ...|++.|+.++++..+.  ++..++++
T Consensus       153 ~~~A~~~Gl~~vli~sg~--eSI~~Ai~  178 (196)
T 2q5c_A          153 TDEAIKQGLYGETINSGE--ESLRRAIE  178 (196)
T ss_dssp             HHHHHHTTCEEEECCCCH--HHHHHHHH
T ss_pred             HHHHHHcCCcEEEEecCH--HHHHHHHH
Confidence            777999999999997654  34444443

>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1

Probab=95.00  E-value=0.11  Score=37.91  Aligned_cols=103  Identities=11%  Similarity=0.086  Sum_probs=65.2

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCccc
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRN   86 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~D   86 (147)
                      ++..+|..+++.+-++++++-.+....++.+.+.++++  +.. ..+    ..++-.+.+++++.-..- -++|||+.. 
T Consensus        94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~--i~~-~~~----~~~ee~~~~i~~l~~~G~-~vVVG~~~~-  164 (225)
T 2pju_A           94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR--LDQ-RSY----ITEEDARGQINELKANGT-EAVVGAGLI-  164 (225)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC--EEE-EEE----SSHHHHHHHHHHHHHTTC-CEEEESHHH-
T ss_pred             HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc--eEE-EEe----CCHHHHHHHHHHHHHCCC-CEEECCHHH-
Confidence            45666667777788999999666566667777778875  221 111    123333444443322222 368998877 


Q ss_pred             HHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhc
Q 032106           87 IDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        87 i~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~  121 (147)
                      ...|+++|+.++++. +  .++..+++++-.+-..
T Consensus       165 ~~~A~~~Gl~~vlI~-s--~eSI~~Ai~eA~~l~~  196 (225)
T 2pju_A          165 TDLAEEAGMTGIFIY-S--AATVRQAFSDALDMTR  196 (225)
T ss_dssp             HHHHHHTTSEEEESS-C--HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcEEEEC-C--HHHHHHHHHHHHHHHH
Confidence            777999999999998 3  4666666665554443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=94.06  E-value=0.082  Score=39.02  Aligned_cols=41  Identities=15%  Similarity=0.181  Sum_probs=34.9

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      ..+.+.++|+.|+++|++++++|++. ...+..+++.+++..
T Consensus        27 ~~~~~~~~l~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           27 DWQPAAPWLTRLREANVPVILCSSKT-SAEMLYLQKTLGLQG   67 (275)
T ss_dssp             SCCTTHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHTTCTT
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCCCC
Confidence            45678999999999999999999887 666788889898864

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=93.72  E-value=0.13  Score=36.70  Aligned_cols=42  Identities=10%  Similarity=0.104  Sum_probs=35.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+.+.+.++|+.|+++|++++++|++. ...+..+++.+|+..
T Consensus        20 ~i~~~~~~al~~l~~~G~~v~i~TGR~-~~~~~~~~~~l~~~~   61 (231)
T 1wr8_A           20 MIHEKALEAIRRAESLGIPIMLVTGNT-VQFAEAASILIGTSG   61 (231)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHHTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCC-hhHHHHHHHHcCCCC
Confidence            466889999999999999999999887 566677788888754

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=93.31  E-value=0.12  Score=38.05  Aligned_cols=44  Identities=27%  Similarity=0.286  Sum_probs=37.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM   46 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~   46 (147)
                      ..+.+.+.++|+.|+++|++++++|++. ...+..+++.+++..+
T Consensus        37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~-~~~~~~~~~~l~~~~~   80 (285)
T 3pgv_A           37 HFLTPYAKETLKLLTARGINFVFATGRH-YIDVGQIRDNLGIRSY   80 (285)
T ss_dssp             SCCCHHHHHHHHHHHTTTCEEEEECSSC-GGGGHHHHHHHCSCCE
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHhcCCCcc
Confidence            3567789999999999999999999888 5555788889998754

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=92.97  E-value=0.12  Score=37.52  Aligned_cols=39  Identities=23%  Similarity=0.389  Sum_probs=32.9

Q ss_pred             hhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            6 PHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         6 pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +.+.++|+.|+++|++++|+|++. ...+..+++.+++..
T Consensus        20 ~~~~~~l~~l~~~g~~~~i~Tgr~-~~~~~~~~~~~~~~~   58 (249)
T 2zos_A           20 DPAKPIIEELKDMGFEIIFNSSKT-RAEQEYYRKELEVET   58 (249)
T ss_dssp             GGGHHHHHHHHHTTEEEEEBCSSC-HHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCc
Confidence            458999999999999999999887 566678888888754

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=92.79  E-value=0.18  Score=37.24  Aligned_cols=42  Identities=19%  Similarity=0.482  Sum_probs=35.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+.|.+.++|++|+++|++++++|++. ...+..+++.+++..
T Consensus        22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~-~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           22 TISPAVKNAIAAARARGVNVVLTTGRP-YAGVHNYLKELHMEQ   63 (282)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSC-GGGTHHHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHhCCCC
Confidence            356789999999999999999999887 555678888888864

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=92.69  E-value=0.28  Score=31.96  Aligned_cols=27  Identities=7%  Similarity=0.110  Sum_probs=24.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP   29 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~   29 (147)
                      .+.|++.++|+.|+++|++++++|++.
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~   50 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARN   50 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            356899999999999999999999776

>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1

Probab=92.62  E-value=1.4  Score=32.87  Aligned_cols=96  Identities=20%  Similarity=0.346  Sum_probs=64.4

Q ss_pred             CCchhHHHHHHHHH---HCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCC--CCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILHALK---DKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSW--SHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~---~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++|+..++++..+   +.|+.+..+++.+ +..++ .+..+|-.-.......++..  -.+++.++.+.+..+++    
T Consensus       116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd-~~~ak-rl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP----  189 (265)
T 1wv2_A          116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDD-PIIAR-QLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP----  189 (265)
T ss_dssp             TCCBCHHHHHHHHHHHHTTTCEEEEEECSC-HHHHH-HHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC----
T ss_pred             ccCcCHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHH-HHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC----
Confidence            56677777766555   4599999655354 66654 47778865444432323332  24688888888865553    


Q ss_pred             EEEe---CCcccHHHHHHcCCeEEEECCCC
Q 032106           78 LFFD---DEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        78 v~Vg---Ds~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |+++   .++.|+..|.++|...++|+.+.
T Consensus       190 VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI  219 (265)
T 1wv2_A          190 VLVDAGVGTASDAAIAMELGCEAVLMNTAI  219 (265)
T ss_dssp             BEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred             EEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence            5666   45568999999999999998753

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=92.32  E-value=0.23  Score=36.94  Aligned_cols=42  Identities=17%  Similarity=0.169  Sum_probs=32.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC--ChHHHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP--SPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~--~~~~~~~~l~~~gl~   44 (147)
                      .++|++.++|+.|++.|++++++||+.  ........++.+|+.
T Consensus        37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence            367899999999999999999999732  234445667778875

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=91.72  E-value=0.38  Score=35.14  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=36.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +.+.+.+.++|+.|+++|+.++++|+.. ...+..+++.+++..
T Consensus        22 ~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~~~~~~   64 (290)
T 3dnp_A           22 GKIHQATKDAIEYVKKKGIYVTLVTNRH-FRSAQKIAKSLKLDA   64 (290)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEBCSSC-HHHHHHHHHHTTCCS
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHcCCCC
Confidence            3567889999999999999999999887 566678888898863

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=91.70  E-value=0.053  Score=39.66  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=31.8

Q ss_pred             CCcHHHHHHHHHHcCCCCCcEEEEeCC----cccHHHHHHcCCeEEEECC
Q 032106           57 SHKTDHFQRIHSRTGVPFNSMLFFDDE----DRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        57 kp~~~~~~~~~~~~~~~~~~~v~VgDs----~~Di~~a~~~Gi~~i~v~~  102 (147)
                      -.|...++.+++    ++++++.|||+    .+|+.+.+.+|...+.|..
T Consensus       186 v~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n  231 (246)
T 3f9r_A          186 WDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS  231 (246)
T ss_dssp             CSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred             CCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence            344555555544    78999999996    9999999988877777754

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=91.69  E-value=0.39  Score=35.34  Aligned_cols=42  Identities=21%  Similarity=0.276  Sum_probs=34.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+.+...++|+.|++.|++++++|+++ ...+...++.+++..
T Consensus        21 ~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~   62 (288)
T 1nrw_A           21 QVSLENENALRQAQRDGIEVVVSTGRA-HFDVMSIFEPLGIKT   62 (288)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHGGGTCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHcCCCC
Confidence            456788999999999999999999887 566677788888764

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=91.51  E-value=0.18  Score=37.74  Aligned_cols=41  Identities=12%  Similarity=0.133  Sum_probs=34.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHH--HhcC-cc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFL--EKLN-IK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l--~~~g-l~   44 (147)
                      .+.|.+.++|+.|+++|++++++|++. ...+..++  +.++ +.
T Consensus        45 ~is~~~~~al~~l~~~Gi~v~iaTGR~-~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           45 KVPSENIDAIKEAIEKGYMVSICTGRS-KVGILSAFGEENLKKMN   88 (301)
T ss_dssp             CSCHHHHHHHHHHHHHTCEEEEECSSC-HHHHHHHHCHHHHHHHT
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHhhHHhhcccc
Confidence            355789999999999999999999887 66667778  7777 65

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=91.20  E-value=0.48  Score=34.37  Aligned_cols=42  Identities=17%  Similarity=0.300  Sum_probs=35.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      +.+.+.+.++|+.|+++|+.++++|++. ...+..+++.+++.
T Consensus        21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           21 KEISSRNRETLIRIQEQGIRLVLASGRP-TYGIVPLANELRMN   62 (279)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTGG
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHHhCCC
Confidence            4567889999999999999999999887 56667888888874

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=91.02  E-value=0.35  Score=35.49  Aligned_cols=42  Identities=21%  Similarity=0.222  Sum_probs=34.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+.+.+.++|++|+++|+.++++|++. ...+..+++.+++..
T Consensus        39 ~i~~~~~~al~~l~~~G~~v~iaTGR~-~~~~~~~~~~l~~~~   80 (283)
T 3dao_A           39 LIDPEYMSVIDRLIDKGIIFVVCSGRQ-FSSEFKLFAPIKHKL   80 (283)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHTGGGGGGC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCc
Confidence            467889999999999999999999887 566677777777653

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=90.88  E-value=0.46  Score=34.46  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=34.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +.+.+.+.++|+.|+++|+.++++|+.. ...+..+++.+++..
T Consensus        21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           21 NELAQATIDAVQAAKAQGIKVVLCTGRP-LTGVQPYLDAMDIDG   63 (279)
T ss_dssp             ---CHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCCS
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCC
Confidence            3567889999999999999999999887 566678888888763

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=90.68  E-value=0.39  Score=34.55  Aligned_cols=43  Identities=26%  Similarity=0.306  Sum_probs=34.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +.+.+.+.++|+.|+++|++++++|++. ...+..+++.+++..
T Consensus        19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~-~~~~~~~~~~l~~~~   61 (258)
T 2pq0_A           19 KQLPLSTIEAVRRLKQSGVYVAIATGRA-PFMFEHVRKQLGIDS   61 (258)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEECSSC-GGGSHHHHHHHTCCC
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHhcCCCE
Confidence            3466788999999999999999999887 445567778777754

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=90.30  E-value=0.5  Score=34.09  Aligned_cols=41  Identities=20%  Similarity=0.248  Sum_probs=31.5

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCC--hHHHHHHHHhcCcc
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPS--PDIANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~--~~~~~~~l~~~gl~   44 (147)
                      +.|++.++|+.|++.|++++++||+.-  .......++.+|+.
T Consensus        34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~   76 (271)
T 1vjr_A           34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   76 (271)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            568999999999999999999995421  33445567777764

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=90.00  E-value=0.52  Score=34.31  Aligned_cols=41  Identities=10%  Similarity=-0.037  Sum_probs=33.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+-+.+.++|++ +++|++++++|++. ...+..+++.+++..
T Consensus        19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~-~~~~~~~~~~l~~~~   59 (268)
T 1nf2_A           19 EISEKDRRNIEK-LSRKCYVVFASGRM-LVSTLNVEKKYFKRT   59 (268)
T ss_dssp             CCCHHHHHHHHH-HTTTSEEEEECSSC-HHHHHHHHHHHSSSC
T ss_pred             ccCHHHHHHHHH-HhCCCEEEEECCCC-hHHHHHHHHHhCCCC
Confidence            355778999999 99999999999887 566678888888864

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=87.37  E-value=0.35  Score=35.28  Aligned_cols=40  Identities=23%  Similarity=0.205  Sum_probs=29.4

Q ss_pred             Cchh-HHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            4 LYPH-AKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         4 ~~pg-v~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      +-+. +.++|+.|+++|++++++|++. ...+...++.+++.
T Consensus        21 i~~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~   61 (271)
T 1rlm_A           21 YNQPRFMAQYQELKKRGIKFVVASGNQ-YYQLISFFPELKDE   61 (271)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECSSC-HHHHGGGCTTTTTT
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHhcCCC
Confidence            4455 4899999999999999999887 44445555555543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=87.31  E-value=0.53  Score=33.91  Aligned_cols=43  Identities=9%  Similarity=0.072  Sum_probs=34.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      +.+.+.+.++|+.|+++|+.++++|+.+ ...+...++.+++..
T Consensus        21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~~~~~~   63 (274)
T 3fzq_A           21 YGIPESAKHAIRLCQKNHCSVVICTGRS-MGTIQDDVLSLGVDG   63 (274)
T ss_dssp             TBCCHHHHHHHHHHHHTTCEEEEECSSC-TTTSCHHHHTTCCSE
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEeCCC-hHHHHHHHHHcCCCE
Confidence            3466889999999999999999999887 444467788888764

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=86.83  E-value=1.3  Score=32.15  Aligned_cols=37  Identities=14%  Similarity=0.157  Sum_probs=28.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNI   43 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl   43 (147)
                      .+-+.+.++|+.|+++|++++++|++. ..   .+.+.+++
T Consensus        21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~-~~---~~~~~l~~   57 (246)
T 3f9r_A           21 CQTDEMRALIKRARGAGFCVGTVGGSD-FA---KQVEQLGR   57 (246)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSC-HH---HHHHHHCT
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCC-HH---HHHHHhhh
Confidence            466889999999999999999999777 33   34555554

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=86.61  E-value=4.3  Score=25.45  Aligned_cols=75  Identities=20%  Similarity=0.243  Sum_probs=48.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCC-----CCh--HHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRS-----PSP--DIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~-----~~~--~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      .+-|.+.+.++.+-+. .++.|.|.+     ..+  ..++.+|+..|+.  |..+++..    ++.....+.+..|..--
T Consensus         2 ~~s~~~~~~v~~~i~~-~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~--~~~~dI~~----~~~~~~~l~~~~g~~tv   74 (109)
T 3ipz_A            2 ALTPQLKDTLEKLVNS-EKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP--FEDVNILE----NEMLRQGLKEYSNWPTF   74 (109)
T ss_dssp             CCCHHHHHHHHHHHTS-SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC--CEEEEGGG----CHHHHHHHHHHHTCSSS
T ss_pred             CCCHHHHHHHHHHHcc-CCEEEEEecCCCCCCChhHHHHHHHHHHcCCC--cEEEECCC----CHHHHHHHHHHHCCCCC
Confidence            4567888999998776 678888753     222  3456788888886  55433321    35555555555565544


Q ss_pred             cEEEEeCCc
Q 032106           76 SMLFFDDED   84 (147)
Q Consensus        76 ~~v~VgDs~   84 (147)
                      -.+|||+..
T Consensus        75 P~ifi~g~~   83 (109)
T 3ipz_A           75 PQLYIGGEF   83 (109)
T ss_dssp             CEEEETTEE
T ss_pred             CeEEECCEE
Confidence            578998864

>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}

Probab=86.38  E-value=1.2  Score=30.41  Aligned_cols=30  Identities=30%  Similarity=0.327  Sum_probs=26.5

Q ss_pred             CCCCchhH-HHHHHHHHHCCCeEEEEcCCCC
Q 032106            1 MPSLYPHA-KGILHALKDKGIDVAVASRSPS   30 (147)
Q Consensus         1 ~p~~~pgv-~~~L~~L~~~g~~l~i~S~~~~   30 (147)
                      +|.+.|+. .++++.+++.|+.+.+.||+..
T Consensus        13 EPll~~~~~~~l~~~~~~~g~~~~l~TNG~l   43 (182)
T 3can_A           13 EPLLHPEFLIDILKRCGQQGIHRAVDTTLLA   43 (182)
T ss_dssp             TGGGSHHHHHHHHHHHHHTTCCEEEECTTCC
T ss_pred             cccCCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence            47888997 5999999999999999999873

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=84.46  E-value=0.75  Score=33.01  Aligned_cols=37  Identities=16%  Similarity=0.190  Sum_probs=29.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL   41 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~   41 (147)
                      .+-|.+.++|+.|+++| +++|+|++. ...+..+++.+
T Consensus        23 ~i~~~~~~al~~l~~~g-~v~iaTGR~-~~~~~~~~~~l   59 (239)
T 1u02_A           23 YADAGLLSLISDLKERF-DTYIVTGRS-PEEISRFLPLD   59 (239)
T ss_dssp             CCCHHHHHHHHHHHHHS-EEEEECSSC-HHHHHHHSCSS
T ss_pred             CCCHHHHHHHHHHhcCC-CEEEEeCCC-HHHHHHHhccc
Confidence            45678999999999999 999999887 55555555544

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=84.44  E-value=0.81  Score=33.86  Aligned_cols=41  Identities=22%  Similarity=0.257  Sum_probs=31.2

Q ss_pred             CCchh-HHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            3 SLYPH-AKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pg-v~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      .+.+. +.++|+.|+++|+.++++|+.. ...+..++..+++.
T Consensus        54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~~l~~~   95 (304)
T 3l7y_A           54 SYDHNRFQRILKQLQERDIRFVVASSNP-YRQLREHFPDCHEQ   95 (304)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECSSC-HHHHHTTCTTTGGG
T ss_pred             ccCHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHhCCC
Confidence            44566 7899999999999999999887 55555666666653

>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}

Probab=81.43  E-value=2.2  Score=32.34  Aligned_cols=41  Identities=17%  Similarity=0.405  Sum_probs=31.8

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcC
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLN   42 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~g   42 (147)
                      +|.+.|.+.++++.+++.|+.+.+.||+..++.++. +...|
T Consensus       152 EPll~~~l~~ll~~~~~~g~~i~l~TNG~~~e~l~~-L~~~g  192 (342)
T 2yx0_A          152 EPMLYPYMGDLVEEFHKRGFTTFIVTNGTIPERLEE-MIKED  192 (342)
T ss_dssp             CGGGSTTHHHHHHHHHHTTCEEEEEECSCCHHHHHH-HHHTT
T ss_pred             cccchhhHHHHHHHHHHCCCcEEEEcCCCcHHHHHH-HHhcC
Confidence            477788999999999999999999999986444444 44443

>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}

Probab=80.41  E-value=1.6  Score=32.49  Aligned_cols=40  Identities=23%  Similarity=0.419  Sum_probs=32.2

Q ss_pred             CCCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcc
Q 032106            1 MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK   44 (147)
Q Consensus         1 ~p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~   44 (147)
                      +|.++|.+.++++.+++.|+.+.+.||+..+    ..++.+++.
T Consensus       138 EPll~~~l~~li~~~~~~g~~~~l~TNG~~~----~~l~~L~~~  177 (311)
T 2z2u_A          138 EPTLYPYLDELIKIFHKNGFTTFVVSNGILT----DVIEKIEPT  177 (311)
T ss_dssp             CGGGSTTHHHHHHHHHHTTCEEEEEECSCCH----HHHHHCCCS
T ss_pred             CccchhhHHHHHHHHHHCCCcEEEECCCCCH----HHHHhCCCC
Confidence            4777899999999999999999999998742    345666653

>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*

Probab=80.36  E-value=7.6  Score=27.98  Aligned_cols=84  Identities=12%  Similarity=0.046  Sum_probs=49.3

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHH----cCCCCCcEEEEeCCc
Q 032106            9 KGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSR----TGVPFNSMLFFDDED   84 (147)
Q Consensus         9 ~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~----~~~~~~~~v~VgDs~   84 (147)
                      .++++.+++.+.++.++|+....... ...-..|..+|+.        ||.+..+..+...    +....-++++|+|..
T Consensus        64 ~~~~~~lr~~~~pvi~lt~~~~~~~~-~~a~~~Ga~dyl~--------Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~  134 (259)
T 3luf_A           64 GEAVKVLLERGLPVVILTADISEDKR-EAWLEAGVLDYVM--------KDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSR  134 (259)
T ss_dssp             SHHHHHHHHTTCCEEEEECC-CHHHH-HHHHHTTCCEEEE--------CSSHHHHHHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             HHHHHHHHhCCCCEEEEEccCCHHHH-HHHHHCCCcEEEe--------CCchhHHHHHHHhhhhHhhcCCCcEEEEeCCH
Confidence            47888888889999999977654443 3344678777754        3444333333221    222456789999987


Q ss_pred             ccHHHH----HHcCCeEEEEC
Q 032106           85 RNIDAV----SKMGVTGILVG  101 (147)
Q Consensus        85 ~Di~~a----~~~Gi~~i~v~  101 (147)
                      ......    ...|..+..+.
T Consensus       135 ~~~~~l~~~L~~~~~~v~~a~  155 (259)
T 3luf_A          135 TSRHRTMAQLRKQLLQVHEAS  155 (259)
T ss_dssp             HHHHHHHHHHHTTTCEEEEES
T ss_pred             HHHHHHHHHHHHcCcEEEEeC
Confidence            654332    23455554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	1e-22
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-07
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	2e-05
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	7e-05
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	1e-04
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	0.003

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.6 bits (211), Expect = 1e-22
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 2/118 (1%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
              LYP    +L  L+  G+ VA ASR+     AN  LE  ++   F+          K 
Sbjct: 44  NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ--REIYPGSKV 101

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
            HF+R+H +TGVPF+ M+FFDDE+RNI  V ++GVT I + +G++L  L QGL  F++
Sbjct: 102 THFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (108), Expect = 2e-07
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 6/107 (5%)

Query: 3   SLYPHAKGILHALKDKGIDVAVAS---RSPSPDIANTFLEKLNIKSMF---VAKEIFSSW 56
           S+         ALK KG    + +           +       +   F   +        
Sbjct: 97  SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI 156

Query: 57  SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG 103
             +   +  +        N ++F DD   N+     MG+  ILV N 
Sbjct: 157 KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 40.5 bits (93), Expect = 2e-05
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 3   SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHK 59
           +L P    I+H L+++G  V V S +          E   I+         +       +
Sbjct: 84  ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPE 143

Query: 60  TDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNL 106
              +Q +    G   +  +FFDD   NI+  +++G+T ILV +   +
Sbjct: 144 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 190

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 7e-05
 Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 6/106 (5%)

Query: 4   LYPHAKGILHALKDKGIDVAVASRSPSPDIANT---FLEKLNIKSMF---VAKEIFSSWS 57
           +          L+ KG   A+ + +   D A           +K  F   +         
Sbjct: 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVK 159

Query: 58  HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG 103
            +   ++ +        + ++F DD   N+     +G+  ILV + 
Sbjct: 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 37.9 bits (86), Expect = 1e-04
 Identities = 22/108 (20%), Positives = 36/108 (33%)

Query: 1   MPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKT 60
              +YP    +L  L+   I +A+AS S +       +               ++     
Sbjct: 89  PADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAP 148

Query: 61  DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGA 108
           D F       GV  +  +  +D    I A+   G   I VG   +LG 
Sbjct: 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGD 196

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 31/141 (21%)

Query: 5   YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSS--------- 55
               K +L+ LK  G ++ +A+  P         E L +   F A  I ++         
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENM 275

Query: 56  -----WSHKTD----------------HFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG 94
                   K +                          V  + +    D   ++ +  K+G
Sbjct: 276 YPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335

Query: 95  VTGILVGNGVNLGALRQGLTK 115
            T I    G+        L  
Sbjct: 336 ATFIGTLTGLKGKDAAGELEA 356

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.92
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.87
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.87
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.86
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.85
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.85
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.84
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.84
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.83
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.83
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.82
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.81
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.8
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.8
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.8
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.79
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.78
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.77
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.76
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.75
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.74
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.68
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.68
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.58
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.55
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.54
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.44
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.43
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.34
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.32
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.32
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.12
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.11
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.09
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.86
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.84
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.81
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.75
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.6
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.59
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.54
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.53
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.53
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.5
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.39
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.38
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.34
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.29
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.15
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.66
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.23
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.06
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.96
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	96.93
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.72
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	96.39
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	95.08
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	94.48
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	92.54
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	91.89
d1xm3a_	251	Thiazole biosynthesis protein ThiG {Bacillus subti	91.26
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	90.53
d7reqb2	163	Methylmalonyl-CoA mutase beta subunit, C-terminal	86.14
d1h1ya_	220	D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sa	84.58

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.1e-24  Score=152.19  Aligned_cols=117  Identities=40%  Similarity=0.657  Sum_probs=108.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+|||+.++|+.|+++|++++|+||++.....+..++.+++..+|..  .....||++..|..+++++|++|++++||||
T Consensus        46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~--~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD  123 (164)
T d1u7pa_          46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ--REIYPGSKVTHFERLHHKTGVPFSQMVFFDD  123 (164)
T ss_dssp             CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE--EEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred             ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee--eecccCCChHHHHHHHHHhCCChHHEEEEcC
Confidence            68999999999999999999999988766777788999999988887  4456789999999999999999999999999


Q ss_pred             CcccHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhhc
Q 032106           83 EDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWN  121 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~~~~~~  121 (147)
                      +..|+++|+++|+.+|+|.+|.+.+++.+++++|.+..+
T Consensus       124 ~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~~~~a  162 (164)
T d1u7pa_         124 ENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQA  162 (164)
T ss_dssp             CHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999988765

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.1e-22  Score=143.72  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=94.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|+++|++++|+||+. ...++..++.+|+.+||+.+   +.++.+||++.+|+.+++++|++|++++|
T Consensus        88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~-~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  166 (218)
T d1te2a_          88 PLLPGVREAVALCKEQGLLVGLASASP-LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  166 (218)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccchHHHHHHHhhhcccccccccccc-ccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEE
Confidence            478999999999999999999999887 77789999999999999986   55677999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      |||+..|+.+|+++|+.+|+|.++...
T Consensus       167 igD~~~di~aA~~~G~~~i~v~~~~~~  193 (218)
T d1te2a_         167 LEDSVNGMIASKAARMRSIVVPAPEAQ  193 (218)
T ss_dssp             EESSHHHHHHHHHTTCEEEECCCTTTT
T ss_pred             EeeCHHHHHHHHHcCCEEEEECCCCCc
Confidence            999999999999999999999876543

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.87  E-value=1.8e-22  Score=143.95  Aligned_cols=101  Identities=15%  Similarity=0.205  Sum_probs=91.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+++|++++|+||+. .. +..+++++|+.+||+.+   +....+||++++|+.+++++|++|++|+
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~-~~-~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l  158 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKG-NN-AFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  158 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSC-TH-HHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccc-hh-hhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEE
Confidence            3578999999999999999999999876 44 45689999999999985   4566799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ||||+.+|+.+|+++|+.+|++.++.
T Consensus       159 ~VgD~~~Di~~A~~~G~~~i~v~~~~  184 (204)
T d2go7a1         159 YIGDRTLDVEFAQNSGIQSINFLEST  184 (204)
T ss_dssp             EEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             EEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999998774

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3e-21  Score=139.54  Aligned_cols=103  Identities=14%  Similarity=0.234  Sum_probs=93.0

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----eecCCCCCcHHHHHHHHHHcCCCCCcE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----EIFSSWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      +.++||+.++|..|+++|++++|+||+. ....+..++..++.++|+..    +.....||++.+|..+++++|++|++|
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~  204 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGS-VEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI  204 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCc-HHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence            3689999999999999999999999998 77778899999998888763    334568999999999999999999999


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+.+|+.+|+++||.+++|.++..
T Consensus       205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~  232 (253)
T d1zs9a1         205 LFLTDVTREASAAEEADVHVAVVVRPGN  232 (253)
T ss_dssp             EEEESCHHHHHHHHHTTCEEEEECCTTC
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEEeCCCC
Confidence            9999999999999999999999987544

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.85  E-value=1.7e-21  Score=139.65  Aligned_cols=104  Identities=24%  Similarity=0.376  Sum_probs=96.2

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|..|++.|++++|+||+. ...++..++.+||..+|+.+   +..+..||+|.+|..++++++++|++++
T Consensus        94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~  172 (224)
T d2hsza1          94 SRLYPNVKETLEALKAQGYILAVVTNKP-TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL  172 (224)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             cchHHHHHHHHHHHhccCCccccccccc-HHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccc
Confidence            3579999999999999999999999887 77789999999999999985   5566799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+.+|+.+|+++|+.+++|.+++..
T Consensus       173 ~igD~~~Di~~A~~aG~~~i~v~~g~~~  200 (224)
T d2hsza1         173 FVGDSQNDIFAAHSAGCAVVGLTYGYNY  200 (224)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEESSSCST
T ss_pred             hhcCcHHHHHHHHHcCCeEEEEeCCCCC
Confidence            9999999999999999999999988754

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.85  E-value=2.1e-21  Score=142.75  Aligned_cols=102  Identities=13%  Similarity=0.098  Sum_probs=92.6

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-ccc---eecCCCCCcHHHHHHHHHHcCCCC-CcE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-VAK---EIFSSWSHKTDHFQRIHSRTGVPF-NSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-~~~---~~~~~~kp~~~~~~~~~~~~~~~~-~~~   77 (147)
                      .++||+.++|+.|+++|++++|+||++ ...++..++.+|+..|| +.+   +.++..||+|++|..+++++|+.| ++|
T Consensus        99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~-~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~  177 (257)
T d1swva_          99 SPINGVKEVIASLRERGIKIGSTTGYT-REMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  177 (257)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEBCSSC-HHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             ccCCcHHHHHHHHHhcccceeecCCCc-hhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceE
Confidence            689999999999999999999999888 77788999999999988 443   556778999999999999999965 899


Q ss_pred             EEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           78 LFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        78 v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||||+..|+.+|+++|+.+|+|.+|..
T Consensus       178 v~VgDs~~Di~aA~~aG~~ti~v~~G~~  205 (257)
T d1swva_         178 IKVGDTVSDMKEGRNAGMWTVGVILGSS  205 (257)
T ss_dssp             EEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             EEEeCChhhHHHHHHCCCEEEEEccCCC
Confidence            9999999999999999999999998863

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.84  E-value=1.4e-21  Score=139.59  Aligned_cols=103  Identities=11%  Similarity=0.117  Sum_probs=94.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++ +++++|+||+. ...++..++++|+..+|+.+   +..+.+||+|.+|..+++++|+.|++|+|
T Consensus        82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          82 ELYPGITSLFEQLPS-ELRLGIVTSQR-RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             EECTTHHHHHHHSCT-TSEEEEECSSC-HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             ccccchhhhhhhhcc-ccccccccccc-ccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            478999999999975 69999999887 78889999999999999885   55677999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      |||+.+|+.+|+++|+.++++.+|....
T Consensus       160 VgDs~~Di~~a~~aG~~~i~v~~g~~~~  187 (207)
T d2hdoa1         160 IGDSVSDEQTAQAANVDFGLAVWGMDPN  187 (207)
T ss_dssp             EESSHHHHHHHHHHTCEEEEEGGGCCTT
T ss_pred             ecCCHHHHHHHHHcCCeEEEEecCCCCh
Confidence            9999999999999999999999876654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.84  E-value=8.7e-21  Score=137.47  Aligned_cols=102  Identities=22%  Similarity=0.348  Sum_probs=92.3

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      +.++||+.++|+.|+ +|++++|+||+. ...++..++.+|+.++|+.+   +.++..||++++|..+++++|++|++|+
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l  176 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSD-TEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV  176 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccc-cccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccccccc
Confidence            468999999999997 579999999987 77788999999999999986   5567799999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEEEECCCCC
Q 032106           79 FFDDED-RNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      ||||+. +|+.+|+++|+.++++.++..
T Consensus       177 ~vgD~~~~Di~~A~~~G~~~v~v~~~~~  204 (230)
T d1x42a1         177 YVGDNPVKDCGGSKNLGMTSILLDRKGE  204 (230)
T ss_dssp             EEESCTTTTHHHHHTTTCEEEEECTTSC
T ss_pred             eeecCcHhHHHHHHHcCCEEEEECCCCC
Confidence            999985 699999999999999987654

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=1e-20  Score=133.64  Aligned_cols=102  Identities=20%  Similarity=0.249  Sum_probs=89.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      +.++||+.++|+.|+++|++++|+||+. .... ..++.+++..+|+.+   +.+...||+|++|+.+++++++  ++++
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~-~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l  153 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRN-DQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGL  153 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSC-THHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEE
T ss_pred             CcccchhHHHHHHHHhhhccccccccCc-cchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeE
Confidence            5789999999999999999999999887 5554 578999999999985   5556799999999999999987  4599


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||||+..|+++|+++|+.++++.++....
T Consensus       154 ~vgDs~~Di~aA~~aG~~~i~v~~~~~~~  182 (187)
T d2fi1a1         154 VIGDRPIDIEAGQAAGLDTHLFTSIVNLR  182 (187)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred             EEeCCHHHHHHHHHcCCEEEEECCCCChH
Confidence            99999999999999999999998754443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.83  E-value=9.4e-21  Score=136.11  Aligned_cols=98  Identities=26%  Similarity=0.355  Sum_probs=90.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++||+.++|+.|++.|++++++||+..   ....++.+|+.++|+.+   +..+.+||++++|+.+++++|++|++|||
T Consensus        91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~  167 (221)
T d1o08a_          91 DVYPGILQLLKDLRSNKIKIALASASKN---GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             cccCCceeccccccccccceEEEeecch---hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEEE
Confidence            5799999999999999999999998753   46789999999999985   56667999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      |||+..|+.+|+++|+.+|+|.++
T Consensus       168 VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         168 LEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             EESSHHHHHHHHHHTCEEEEESCH
T ss_pred             EecCHHHHHHHHHcCCEEEEECCh
Confidence            999999999999999999999874

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.82  E-value=3.7e-20  Score=132.58  Aligned_cols=101  Identities=12%  Similarity=0.259  Sum_probs=93.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .++|++.++|+.|+..|++++++||+. ....+..++..++..+|+.+   +.++..||+|..|+.+++++|++|++|+|
T Consensus        93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~-~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          93 APFSEVPDSLRELKRRGLKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             cccchhHHHHHHHHhcCCeEEeecchH-HHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            468999999999999999999999888 77778999999999999985   56677999999999999999999999999


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      |||+..|+.+|+++|+.++++.++.
T Consensus       172 VgD~~~Di~~A~~aG~~~v~v~r~~  196 (220)
T d1zrna_         172 VASNAWDATGARYFGFPTCWINRTG  196 (220)
T ss_dssp             EESCHHHHHHHHHHTCCEEEECTTC
T ss_pred             EecChHhHHHHHHcCCEEEEEcCCC
Confidence            9999999999999999999997653

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.81  E-value=6.9e-20  Score=132.36  Aligned_cols=104  Identities=13%  Similarity=0.124  Sum_probs=90.9

Q ss_pred             CCchhHHHHHHHHHHCC-CeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHc---CCCCC
Q 032106            3 SLYPHAKGILHALKDKG-IDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRT---GVPFN   75 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~---~~~~~   75 (147)
                      .++||+.++|+.|+++| ++++|+||+. ...++..++.+|+.+||+.+   +.....||+|..+...+..+   ++.|+
T Consensus        91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~-~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~  169 (228)
T d2hcfa1          91 TLLEGVRELLDALSSRSDVLLGLLTGNF-EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  169 (228)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSC-HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             eecCchHHHHhhhhccccccccccCCCc-chhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChh
Confidence            57899999999999987 8999999887 77778999999999999985   44556789988877666665   79999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      +|+||||+.+|+.+|+++|+.+|+|.+|....
T Consensus       170 ~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~  201 (228)
T d2hcfa1         170 QIVIIGDTEHDIRCARELDARSIAVATGNFTM  201 (228)
T ss_dssp             GEEEEESSHHHHHHHHTTTCEEEEECCSSSCH
T ss_pred             HheeecCChHHHHHHHHcCCEEEEEcCCCCCH
Confidence            99999999999999999999999999886654

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=8.2e-20  Score=130.74  Aligned_cols=103  Identities=17%  Similarity=0.155  Sum_probs=90.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC---hHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS---PDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~---~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++|++.++|..|+++|++++++||+..   ....+..+...++.+||+.+   +.++.+||++++|..++++++++|++
T Consensus        97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~  176 (222)
T d1cr6a1          97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE  176 (222)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred             CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcce
Confidence            4689999999999999999999997531   22445567788999999985   56677999999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      |+||||+..|+.+|+++||.+|+|.++..
T Consensus       177 ~l~IgD~~~Di~~A~~aG~~ti~V~~~~~  205 (222)
T d1cr6a1         177 VVFLDDFGSNLKPARDMGMVTILVHNTAS  205 (222)
T ss_dssp             EEEEESSSTTTHHHHHHTCEEEECCSSSH
T ss_pred             EEEEECCHHHHHHHHHcCCEEEEECCcch
Confidence            99999999999999999999999987654

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.80  E-value=2.3e-19  Score=130.15  Aligned_cols=100  Identities=18%  Similarity=0.293  Sum_probs=90.9

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++|++.++|+.|+  ++.++++||++ ...+..++..+++..+|+.+   +.++.+||+|++|..+++++|+.|++|+
T Consensus        92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~-~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l  168 (245)
T d1qq5a_          92 LTPYPDAAQCLAELA--PLKRAILSNGA-PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL  168 (245)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred             cccchhhhHHHHHHh--hhceeEEeccc-hHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEE
Confidence            467899999999995  68899999888 67778899999999999885   6667799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      ||||+..|+.+|+++||.+++|.+..
T Consensus       169 ~VgD~~~di~~A~~aG~~tv~v~r~~  194 (245)
T d1qq5a_         169 FVSSNGFDVGGAKNFGFSVARVARLS  194 (245)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECCSC
T ss_pred             EEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999998764

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.80  E-value=1.2e-19  Score=129.25  Aligned_cols=104  Identities=13%  Similarity=0.233  Sum_probs=92.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-eecCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-EIFSSWSHKTDHFQRIHSRTGVPFNSMLFF   80 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-~~~~~~kp~~~~~~~~~~~~~~~~~~~v~V   80 (147)
                      ..++||+.++|+.|+.. ++++|+||+. ...++..++++|+..+|+.+ ......||+|.+|..+++++|++|++++||
T Consensus        83 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~-~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1          83 AQLFPQIIDLLEELSSS-YPLYITTTKD-TSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CEECTTHHHHHHHHHTT-SCEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ccchhHHHHHHhhhhcc-cchhhccccc-chhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceee
Confidence            36799999999999877 5899999887 77789999999999999985 333447899999999999999999999999


Q ss_pred             eCCcccHHHHHHcCCeEEEECCCCChH
Q 032106           81 DDEDRNIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        81 gDs~~Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      ||+.+|+.+|+++|+.+++|.+|....
T Consensus       161 GDs~~Di~aa~~aGi~~i~v~~g~~~~  187 (210)
T d2ah5a1         161 GDTKFDMLGARETGIQKLAITWGFGEQ  187 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEEESSSSSCH
T ss_pred             cCCHHHHHHHHHcCCeEEEEcCCCCCH
Confidence            999999999999999999999887643

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=3.5e-19  Score=129.75  Aligned_cols=99  Identities=15%  Similarity=0.139  Sum_probs=87.6

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      ..++||+.++|+.|+ +|++++|+||++ ...++..++.+|+..||+.+   +.++..||++.+|+.+++++|++|++|+
T Consensus       108 ~~~~~~~~~~L~~L~-~~~~l~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l  185 (247)
T d2gfha1         108 MILADDVKAMLTELR-KEVRLLLLTNGD-RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  185 (247)
T ss_dssp             CCCCHHHHHHHHHHH-TTSEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCccHHHHHHHhh-cccceEEeeccc-chhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence            367899999999998 579999999987 67778899999999999875   5567799999999999999999999999


Q ss_pred             EEeCCc-ccHHHHHHcCCeEE-EECC
Q 032106           79 FFDDED-RNIDAVSKMGVTGI-LVGN  102 (147)
Q Consensus        79 ~VgDs~-~Di~~a~~~Gi~~i-~v~~  102 (147)
                      ||||+. +|+.+|+++|+.++ ++..
T Consensus       186 ~iGD~~~~Di~~A~~~G~~~~~~~~~  211 (247)
T d2gfha1         186 MVGDTLETDIQGGLNAGLKATVWINK  211 (247)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred             eeccChHhHHHHHHHcCCeEEEEECC
Confidence            999997 69999999999855 4433

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.4e-19  Score=127.45  Aligned_cols=101  Identities=14%  Similarity=0.136  Sum_probs=87.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh---HHHHHHHHhcCcccccccc---eecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP---DIANTFLEKLNIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~---~~~~~~l~~~gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++||+.++|..|+++|++++++||+...   ...+......++..+|+.+   +.++.+||++.+|+.+++++|++|++
T Consensus        99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e  178 (225)
T d1zd3a1          99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE  178 (225)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccc
Confidence            46899999999999999999999986522   2233445567788899885   55677999999999999999999999


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      |+||||+..|+.+|+++|+.+|+|.++
T Consensus       179 ~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         179 VVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             EEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             eeEEecCHHHHHHHHHcCCEEEEECCc
Confidence            999999999999999999999999864

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=6.7e-20  Score=127.56  Aligned_cols=103  Identities=23%  Similarity=0.395  Sum_probs=89.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhc-Ccccccccc---eecCCCCCcHHHHHHHHHHcCCCCCcEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKL-NIKSMFVAK---EIFSSWSHKTDHFQRIHSRTGVPFNSML   78 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~-gl~~~f~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~~v   78 (147)
                      .+++++.+++..++.+|++++++||++. ......+..+ ++..+|+.+   +..+.+||++++|+.+++++|++|++|+
T Consensus        84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l  162 (197)
T d2b0ca1          84 ALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV  162 (197)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             ccCchhHHHHHHHHhcCCeEEEEeCccH-HHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence            4688999999999999999999998874 4334555554 788899885   5667799999999999999999999999


Q ss_pred             EEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           79 FFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        79 ~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      ||||+..|+++|+++|+.+++|..+...
T Consensus       163 ~vgDs~~di~~A~~aG~~ti~v~~~~~~  190 (197)
T d2b0ca1         163 FFDDNADNIEGANQLGITSILVKDKTTI  190 (197)
T ss_dssp             EEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred             EEeCCHHHHHHHHHcCCEEEEECCCCCC
Confidence            9999999999999999999999876543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=2e-19  Score=125.32  Aligned_cols=102  Identities=11%  Similarity=0.208  Sum_probs=78.5

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC-------h-------HHHHHHHHhcCccc---cccc---ceecCCCCCcHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS-------P-------DIANTFLEKLNIKS---MFVA---KEIFSSWSHKTDH   62 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~-------~-------~~~~~~l~~~gl~~---~f~~---~~~~~~~kp~~~~   62 (147)
                      .++||+.++|+.|++.|++++|+||.+.       .       ......+...|+..   +|..   .+.+..+||+|.+
T Consensus        30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~  109 (161)
T d2fpwa1          30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL  109 (161)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGG
T ss_pred             eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccHH
Confidence            5799999999999999999999998641       0       11234555555532   3322   1455668999999


Q ss_pred             HHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        63 ~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +..+++++|++|++++||||+..|+.+|+++|+.++++..+.
T Consensus       110 ~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         110 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             HHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            999999999999999999999999999999999999997664

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.75  E-value=4.2e-18  Score=122.11  Aligned_cols=101  Identities=18%  Similarity=0.185  Sum_probs=88.5

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----e--ecCCCCCcHHHHHHHHHHcCCCCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----E--IFSSWSHKTDHFQRIHSRTGVPFN   75 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----~--~~~~~kp~~~~~~~~~~~~~~~~~   75 (147)
                      +.++||+.++|+.|+   .+.+|+||+. ...++..++++++..+|+.+    +  ....+||++++|..+++++|++|+
T Consensus        84 ~~~~~g~~~~L~~l~---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~  159 (222)
T d2fdra1          84 VKIIDGVKFALSRLT---TPRCICSNSS-SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD  159 (222)
T ss_dssp             CCBCTTHHHHHHHCC---SCEEEEESSC-HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGG
T ss_pred             cchhhhHHHHhhhcc---ccceeeeecc-hhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCc
Confidence            578999999999885   4568999887 67778999999999999874    1  134589999999999999999999


Q ss_pred             cEEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           76 SMLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        76 ~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      +|+||||+..|+.+|+++|+.+|++.++...
T Consensus       160 ~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~  190 (222)
T d2fdra1         160 RVVVVEDSVHGIHGARAAGMRVIGFTGASHT  190 (222)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEEECCSTTC
T ss_pred             eEEEEcCCHHHHHHHHHcCCEEEEEccCCCC
Confidence            9999999999999999999999999988643

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.74  E-value=2.2e-18  Score=124.67  Aligned_cols=103  Identities=13%  Similarity=0.148  Sum_probs=79.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCC-------hH-------HHHHHHHhcCc--ccccccc-----------eecCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPS-------PD-------IANTFLEKLNI--KSMFVAK-----------EIFSS   55 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~-------~~-------~~~~~l~~~gl--~~~f~~~-----------~~~~~   55 (147)
                      +++||+.++|+.|+++|++++|+||...       ..       .....+...|+  ..+|...           ..+.+
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM  127 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence            6899999999999999999999997420       01       11223444443  1111110           12345


Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      +||+|.++..+++++++++++++||||+..|+++|+++||.++++.++..
T Consensus       128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~  177 (209)
T d2o2xa1         128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEA  177 (209)
T ss_dssp             STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCC
T ss_pred             ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCC
Confidence            79999999999999999999999999999999999999999999987654

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.68  E-value=1.2e-16  Score=124.56  Aligned_cols=106  Identities=17%  Similarity=0.118  Sum_probs=90.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccce----------------ecCCCCCcHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE----------------IFSSWSHKTDHFQRI   66 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~----------------~~~~~kp~~~~~~~~   66 (147)
                      .++||+.++|+.|+++|++++|+||.+ +..++..++++|+..||+...                .....||+|..|..+
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~-~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCC-HHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            367899999999999999999999888 788899999999999997521                124579999999988


Q ss_pred             HHHc--------------CCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCCChHHH
Q 032106           67 HSRT--------------GVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGAL  109 (147)
Q Consensus        67 ~~~~--------------~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~~~~  109 (147)
                      +..+              +..+++|+||||+.+|+.+|+++|+.+|+|.+|......
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~  350 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDA  350 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGG
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCccc
Confidence            7544              567889999999999999999999999999998765433

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=1e-16  Score=113.02  Aligned_cols=107  Identities=10%  Similarity=0.164  Sum_probs=79.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChH--------------HHHHHHHhcCccc---cccc----------ceecCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPD--------------IANTFLEKLNIKS---MFVA----------KEIFSS   55 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--------------~~~~~l~~~gl~~---~f~~----------~~~~~~   55 (147)
                      +++||+.++|+.|+++|++++|+||.....              .....+...++.-   +|..          ...+.+
T Consensus        27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~  106 (182)
T d2gmwa1          27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC  106 (182)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred             eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccc
Confidence            579999999999999999999999875100              0111222233211   1100          134556


Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCe-EEEECCCCChHHH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT-GILVGNGVNLGAL  109 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~-~i~v~~~~~~~~~  109 (147)
                      +||+|.++..+++++++++++++||||+..|+++|+++|+. ++++.++......
T Consensus       107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~  161 (182)
T d2gmwa1         107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPE  161 (182)
T ss_dssp             STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHH
T ss_pred             cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcc
Confidence            89999999999999999999999999999999999999996 5778877665433

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=2.1e-15  Score=107.10  Aligned_cols=97  Identities=18%  Similarity=0.229  Sum_probs=75.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHH-----------HHhcCcccccccc--eecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTF-----------LEKLNIKSMFVAK--EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~-----------l~~~gl~~~f~~~--~~~~~~kp~~~~~~~~~~~   69 (147)
                      .+++++.+++..    +..+++.|+.. ......+           +..+||..||+.+  .....+||++.+|..++++
T Consensus        97 ~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~  171 (225)
T d2g80a1          97 PVYADAIDFIKR----KKRVFIYSSGS-VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD  171 (225)
T ss_dssp             CCCHHHHHHHHH----CSCEEEECSSC-HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred             cchhhHHHHHhh----HHhhhhhhhcc-chhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHHHHHh
Confidence            456666666543    46788888665 3332222           3456888899885  2223479999999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCCC
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +|++|++|+||||+..|+.+|+++|+.+++|.+..
T Consensus       172 lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g  206 (225)
T d2g80a1         172 IGAKASEVLFLSDNPLELDAAAGVGIATGLASRPG  206 (225)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTT
T ss_pred             cccCchhceeecCCHHHHHHHHHcCCEEEEEeCCC
Confidence            99999999999999999999999999999998754

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=1.9e-14  Score=105.39  Aligned_cols=52  Identities=19%  Similarity=0.091  Sum_probs=48.7

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCChH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      .||++.+|+.+++++|++|++|+||||++. ||.+|+++||.+++|.+|...+
T Consensus       175 ~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~  227 (250)
T d2c4na1         175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSL  227 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCG
T ss_pred             ccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCH
Confidence            699999999999999999999999999976 9999999999999999987643

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.54  E-value=4.4e-15  Score=106.41  Aligned_cols=95  Identities=9%  Similarity=0.019  Sum_probs=81.8

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc----------------eecCCCCCcHHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK----------------EIFSSWSHKTDHFQR   65 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~----------------~~~~~~kp~~~~~~~   65 (147)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++++++..+|...                ......++++.....
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~-~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  152 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGM-DFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS  152 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEE-HHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcch-hhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence            3689999999999999999999999887 78889999999988876321                112226788899999


Q ss_pred             HHHHcCCCCCcEEEEeCCcccHHHHHHcCCeE
Q 032106           66 IHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTG   97 (147)
Q Consensus        66 ~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~   97 (147)
                      +++++++.+++++||||+.+|+.+|+++|+.+
T Consensus       153 ~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~  184 (226)
T d2feaa1         153 VIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF  184 (226)
T ss_dssp             HHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             HHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence            99999999999999999999999999999754

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.44  E-value=4.8e-13  Score=97.72  Aligned_cols=50  Identities=20%  Similarity=0.299  Sum_probs=47.3

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVN  105 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~  105 (147)
                      .||++.+|..+++++|++|++++||||++. ||.+|+++|+.+++|.+|..
T Consensus       179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~  229 (253)
T d1yv9a1         179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT  229 (253)
T ss_dssp             STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCC
Confidence            799999999999999999999999999975 99999999999999988764

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.43  E-value=5.2e-13  Score=97.80  Aligned_cols=52  Identities=21%  Similarity=0.220  Sum_probs=48.5

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCChH
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVNLG  107 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~~  107 (147)
                      .||++.+|..+++++|++|++++||||++. ||.+|+++||.++||.+|....
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~  236 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTP  236 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCH
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCH
Confidence            699999999999999999999999999965 9999999999999999986644

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.34  E-value=2.9e-13  Score=99.11  Aligned_cols=52  Identities=19%  Similarity=0.195  Sum_probs=48.2

Q ss_pred             CCCCcHHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHHHcCCeEEEECCCCCh
Q 032106           55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        55 ~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      .+||+|.+|+.+++++|++|++|+||||++. ||.+|+++||.+++|.+|...
T Consensus       178 ~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~  230 (253)
T d1wvia_         178 IGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTK  230 (253)
T ss_dssp             CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSC
T ss_pred             eccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCC
Confidence            3599999999999999999999999999977 999999999999999988643

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.32  E-value=9.9e-12  Score=83.53  Aligned_cols=101  Identities=15%  Similarity=0.136  Sum_probs=72.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHH--HHHHHHhcCc-----c-cccccc--eecCCCCCcHHHHHHHHHHcCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDI--ANTFLEKLNI-----K-SMFVAK--EIFSSWSHKTDHFQRIHSRTGV   72 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~--~~~~l~~~gl-----~-~~f~~~--~~~~~~kp~~~~~~~~~~~~~~   72 (147)
                      .++||+.++|+.|+++|+.++++||.+....  ....++..+.     . .++...  .......|+.......+.++..
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~  115 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIA  115 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTT
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhcc
Confidence            5799999999999999999999998763211  1122322110     0 111111  2223356778888888888877


Q ss_pred             CCCc-EEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           73 PFNS-MLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        73 ~~~~-~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .+.+ +++|||+..|+++|+++|+.++.|.+|
T Consensus       116 ~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         116 PHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             TTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             CCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            7666 467899999999999999999999887

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.4e-12  Score=93.66  Aligned_cols=96  Identities=19%  Similarity=0.276  Sum_probs=73.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc------ccc---eec--------CCCCCcHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF------VAK---EIF--------SSWSHKTDHFQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f------~~~---~~~--------~~~kp~~~~~~   64 (147)
                      +.++||+.++|+.|+++|++++|+|++. ...++.+++.+|++.++      ...   ...        .....|....+
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~-~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~  159 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK  159 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCc-hHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence            5789999999999999999999999887 78889999999997531      110   111        11233556666


Q ss_pred             HHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEEC
Q 032106           65 RIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVG  101 (147)
Q Consensus        65 ~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~  101 (147)
                      .+...+  .++++++|||+.+|+.+++.+|+. +++.
T Consensus       160 ~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~-va~~  193 (217)
T d1nnla_         160 LLKEKF--HFKKIIMIGDGATDMEACPPADAF-IGFG  193 (217)
T ss_dssp             HHHHHH--CCSCEEEEESSHHHHTTTTTSSEE-EEEC
T ss_pred             HHHhcc--CccccEEEEeCHhhHHHHHhCCce-EEEC
Confidence            665544  568999999999999999999986 4443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=1e-10  Score=82.98  Aligned_cols=95  Identities=16%  Similarity=0.255  Sum_probs=72.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCC-------ChH----HHHHHHHhcCcccc-cccceecCCCCCcHHHHHHHHHHcC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSP-------SPD----IANTFLEKLNIKSM-FVAKEIFSSWSHKTDHFQRIHSRTG   71 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~-------~~~----~~~~~l~~~gl~~~-f~~~~~~~~~kp~~~~~~~~~~~~~   71 (147)
                      ++|++.++|+.|.+.|+.++|+||..       ...    ..+.+++.++.... |-......++||.+.++..++++++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n  130 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQAN  130 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSS
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhc
Confidence            47999999999999999999999852       111    12345556655421 1111334469999999999999985


Q ss_pred             ----CCCCcEEEEeCCc-----------------ccHHHHHHcCCeEE
Q 032106           72 ----VPFNSMLFFDDED-----------------RNIDAVSKMGVTGI   98 (147)
Q Consensus        72 ----~~~~~~v~VgDs~-----------------~Di~~a~~~Gi~~i   98 (147)
                          ++.++++||||..                 .|+..|+++|+.+.
T Consensus       131 ~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         131 EGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             ccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence                7889999999954                 89999999999965

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.11  E-value=1.9e-10  Score=79.91  Aligned_cols=96  Identities=21%  Similarity=0.250  Sum_probs=81.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------------eecCCCCCcHHHHHHHHHH
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------------EIFSSWSHKTDHFQRIHSR   69 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------------~~~~~~kp~~~~~~~~~~~   69 (147)
                      .+++|+.+.+..++..|..++++|+.. ...+.......+...+|...             ......++++..+..++..
T Consensus        75 ~~~~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (210)
T d1j97a_          75 TPTEGAEETIKELKNRGYVVAVVSGGF-DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  153 (210)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEE-HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHcCCEEEeecccc-cccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHH
Confidence            578999999999999999999999776 67778888888887766431             2223467889999999999


Q ss_pred             cCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           70 TGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        70 ~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +++.++++++|||+.+|+.+++.+|+.+++
T Consensus       154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~va~  183 (210)
T d1j97a_         154 EGINLEDTVAVGDGANDISMFKKAGLKIAF  183 (210)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred             hcccccceEEecCCcChHHHHHHCCCCEEE
Confidence            999999999999999999999999987544

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.09  E-value=2e-09  Score=75.82  Aligned_cols=98  Identities=13%  Similarity=0.221  Sum_probs=78.1

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-----------------------------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-----------------------------------   47 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-----------------------------------   47 (147)
                      .+.+.+.++|+.|+++|++++++|+++ ...++.++...++...+                                   
T Consensus        19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~-~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (230)
T d1wr8a_          19 MIHEKALEAIRRAESLGIPIMLVTGNT-VQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP   97 (230)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred             ccCHHHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence            466889999999999999999999877 56667777766654320                                   


Q ss_pred             --------------------------------------------ccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106           48 --------------------------------------------VAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus        48 --------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                                                                  ..++..+...+|+..++.+++++|++++++++|||+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~  177 (230)
T d1wr8a_          98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG  177 (230)
T ss_dssp             TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred             cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence                                                        001333447899999999999999999999999999


Q ss_pred             cccHHHHHHcCCeEEEECC
Q 032106           84 DRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~i~v~~  102 (147)
                      .+|+.+++.+|+. +.+..
T Consensus       178 ~NDi~ml~~ag~~-vav~n  195 (230)
T d1wr8a_         178 ENDLDAFKVVGYK-VAVAQ  195 (230)
T ss_dssp             GGGHHHHHHSSEE-EECTT
T ss_pred             ccHHHHHHHCCeE-EEECC
Confidence            9999999999985 44444

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.86  E-value=3.5e-08  Score=69.84  Aligned_cols=98  Identities=11%  Similarity=0.130  Sum_probs=76.3

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccc-----------------------------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF-----------------------------------   47 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f-----------------------------------   47 (147)
                      .+.|++.++|+.|++.|++++++|+++ ...++.+...+++..++                                   
T Consensus        20 ~i~~~~~~al~~l~~~g~~v~~~TGr~-~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (225)
T d1l6ra_          20 LISTKAIESIRSAEKKGLTVSLLSGNV-IPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT   98 (225)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCc-hhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence            567899999999999999999999777 56667777777764421                                   


Q ss_pred             -----------------c-------------------------cceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcc
Q 032106           48 -----------------V-------------------------AKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDR   85 (147)
Q Consensus        48 -----------------~-------------------------~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~   85 (147)
                                       .                         .++..+..-.|...++.+++++|++++++++|||+.+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n  178 (225)
T d1l6ra_          99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN  178 (225)
T ss_dssp             SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence                             0                         0012222457788999999999999999999999999


Q ss_pred             cHHHHHHcCCeEEEECC
Q 032106           86 NIDAVSKMGVTGILVGN  102 (147)
Q Consensus        86 Di~~a~~~Gi~~i~v~~  102 (147)
                      |+.+++.+|.. +.+..
T Consensus       179 D~~m~~~a~~~-vav~n  194 (225)
T d1l6ra_         179 DMPMFQLPVRK-ACPAN  194 (225)
T ss_dssp             GHHHHTSSSEE-EECTT
T ss_pred             hHHHHHHCCeE-EEECC
Confidence            99999999975 44443

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.84  E-value=2.4e-08  Score=66.53  Aligned_cols=86  Identities=16%  Similarity=0.156  Sum_probs=67.7

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      .+-|+++++++.|++.|++++++|+-+ ...+..+.+.+|+..+|..        -.|+--..+++++... ..+.||||
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~-~~~a~~ia~~lgI~~v~~~--------~~p~~k~~~v~~~q~~-~~v~~vGD   90 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIAE--------VLPHQKSEEVKKLQAK-EVVAFVGD   90 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECS--------CCHHHHHHHHHHHTTT-SCEEEEEC
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcc-hhhhhHHHhhhhhhhhccc--------cchhHHHHHHHHHHcC-CEEEEEeC
Confidence            478999999999999999999999555 8888999999999876643        2233333444444433 57899999


Q ss_pred             CcccHHHHHHcCCeEE
Q 032106           83 EDRNIDAVSKMGVTGI   98 (147)
Q Consensus        83 s~~Di~~a~~~Gi~~i   98 (147)
                      +.+|..+.+.+++...
T Consensus        91 g~nD~~aL~~Advgia  106 (135)
T d2b8ea1          91 GINDAPALAQADLGIA  106 (135)
T ss_dssp             SSSSHHHHHHSSEEEE
T ss_pred             CCCcHHHHHhCCeeee
Confidence            9999999999998744

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.81  E-value=1.6e-08  Score=70.33  Aligned_cols=82  Identities=22%  Similarity=0.279  Sum_probs=69.9

Q ss_pred             HHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHH
Q 032106           11 ILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAV   90 (147)
Q Consensus        11 ~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a   90 (147)
                      .+..|+..|+.++++|... ...+....+.+++...+..      .+++...++.+++++++.+++++||||..+|+.+.
T Consensus        40 gi~~l~~~gi~~~iis~~~-~~~v~~~~~~l~~~~~~~~------~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l  112 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRD-SPILRRRIADLGIKLFFLG------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAF  112 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCC-CHHHHHHHHHHTCCEEEES------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHhhhcEEEEEecCCc-hhHHHHHHhhhcccccccc------cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHH
Confidence            6789999999999999776 4556778888888655443      55788999999999999999999999999999999


Q ss_pred             HHcCCeEEE
Q 032106           91 SKMGVTGIL   99 (147)
Q Consensus        91 ~~~Gi~~i~   99 (147)
                      +.+|+.++.
T Consensus       113 ~~~g~siap  121 (177)
T d1k1ea_         113 AACGTSFAV  121 (177)
T ss_dssp             HHSSEEEEC
T ss_pred             hhCCeEEEc
Confidence            999987553

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=1.2e-08  Score=72.59  Aligned_cols=98  Identities=14%  Similarity=0.244  Sum_probs=66.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCCh---HHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSP---DIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLF   79 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~---~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~   79 (147)
                      .+.||+.++|+.++++|+.++.+||+...   ..++.+.+.+|+...-...-.+...++....-+..++++++    +++
T Consensus        86 ~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I----~l~  161 (209)
T d2b82a1          86 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIF  161 (209)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEE
T ss_pred             CcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCe----EEE
Confidence            35789999999999999999999987532   23344445578742111101122222222223333466777    899


Q ss_pred             EeCCcccHHHHHHcCCeEEEECCCC
Q 032106           80 FDDEDRNIDAVSKMGVTGILVGNGV  104 (147)
Q Consensus        80 VgDs~~Di~~a~~~Gi~~i~v~~~~  104 (147)
                      +||+..|+.+|.++|+.+|-+.+..
T Consensus       162 ~GD~l~Df~aA~eagi~~iRi~r~~  186 (209)
T d2b82a1         162 YGDSDNDITAARDVGARGIRILRAS  186 (209)
T ss_dssp             EESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             ecCCHHHHhHHHHcCCCceEeeccC
Confidence            9999999999999999999986543

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=2.2e-07  Score=67.00  Aligned_cols=44  Identities=16%  Similarity=0.266  Sum_probs=39.4

Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      .|...++.+++++|++++++++|||+.+|+.+.+.+|..++ +.+
T Consensus       190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~va-m~N  233 (269)
T d1rlma_         190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGN  233 (269)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTT
T ss_pred             HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEE-eCC
Confidence            48889999999999999999999999999999999988755 444

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.59  E-value=8.1e-07  Score=63.86  Aligned_cols=44  Identities=18%  Similarity=0.303  Sum_probs=38.6

Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      .|...++.++++++++++++++|||+.+|+.+.+.+|..+ .+..
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~-am~n  240 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV-AVDN  240 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEE-EeCC
Confidence            5778999999999999999999999999999999999664 4443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.54  E-value=3.4e-07  Score=63.87  Aligned_cols=42  Identities=14%  Similarity=0.162  Sum_probs=35.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS   45 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~   45 (147)
                      .+.+.+.++|+.|+++|++++++|+++ ...+...+..+++..
T Consensus        21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~-~~~~~~~~~~~~~~~   62 (232)
T d1xvia_          21 YDWQPAAPWLTRLREANVPVILCSSKT-SAEMLYLQKTLGLQG   62 (232)
T ss_dssp             CSCCTTHHHHHHHHHTTCCEEEECSSC-HHHHHHHHHHTTCTT
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCC-hhhchhHHHHhccCC
Confidence            356788999999999999999999888 666688888888753

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.53  E-value=5.2e-07  Score=65.26  Aligned_cols=45  Identities=16%  Similarity=0.273  Sum_probs=39.6

Q ss_pred             CcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        58 p~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .|...++.+++.+|++++++++|||+.+|+.+.+.+|..+ .+.++
T Consensus       213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~sv-am~na  257 (285)
T d1nrwa_         213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGNA  257 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTTC
T ss_pred             hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEE-EeCCC
Confidence            5788999999999999999999999999999999999664 55543

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=2.2e-08  Score=74.73  Aligned_cols=92  Identities=11%  Similarity=0.119  Sum_probs=64.4

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccc----cc------ccc---ee----cCCCCCcHHHHH
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKS----MF------VAK---EI----FSSWSHKTDHFQ   64 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~----~f------~~~---~~----~~~~kp~~~~~~   64 (147)
                      ..+.||+.++++.|+++|++++|+|++- ..+++.+++++|+..    .+      +..   ..    +.....+.....
T Consensus       134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~-~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         134 VMLKEGYENFFGKLQQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCBCBTHHHHHHHHHHHTCCEEEEEEEE-HHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCeEEEEcCCh-HHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            3678999999999999999999999887 789999999999853    12      110   00    011122333333


Q ss_pred             HHHH--HcCCCCCcEEEEeCCcccHHHHHHcC
Q 032106           65 RIHS--RTGVPFNSMLFFDDEDRNIDAVSKMG   94 (147)
Q Consensus        65 ~~~~--~~~~~~~~~v~VgDs~~Di~~a~~~G   94 (147)
                      ....  +..-...++++|||+.+|+.+|..+.
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            3323  23335688999999999999998754

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.50  E-value=1.4e-07  Score=64.71  Aligned_cols=96  Identities=9%  Similarity=0.102  Sum_probs=73.7

Q ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccc-------eecCCCCCcHHHHHHHHHHcCCCC
Q 032106            2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAK-------EIFSSWSHKTDHFQRIHSRTGVPF   74 (147)
Q Consensus         2 p~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~-------~~~~~~kp~~~~~~~~~~~~~~~~   74 (147)
                      ...+++....+..++ .+.+.+++|.+. ..........+++..++...       .......++.......++.+++.+
T Consensus        68 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (206)
T d1rkua_          68 LKPLEGAVEFVDWLR-ERFQVVILSDTF-YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY  145 (206)
T ss_dssp             CCCCTTHHHHHHHHH-TTSEEEEEEEEE-HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred             ccccchHHHHHHHhh-cCceEEEeccCc-hHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence            356788888887775 679999999776 66777888888877654331       111123455566678889999999


Q ss_pred             CcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           75 NSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        75 ~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      +++++|||+.+|+.+.+.+|+...+
T Consensus       146 ~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         146 YRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             CEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             cceEEecCCccCHHHHHhCCccEEE
Confidence            9999999999999999999998766

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.39  E-value=3.6e-06  Score=65.85  Aligned_cols=100  Identities=13%  Similarity=0.122  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHh-c--------CcccccccceecCC--------------------
Q 032106            5 YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEK-L--------NIKSMFVAKEIFSS--------------------   55 (147)
Q Consensus         5 ~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~-~--------gl~~~f~~~~~~~~--------------------   55 (147)
                      -|.+..+|+.|+++|.+++++||++ -..++..+.. +        .+.++||.+-..+.                    
T Consensus       187 ~~~l~~~L~~lr~~GKklFLiTNS~-~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~  265 (458)
T d2bdea1         187 EKEVVEGLKHFIRYGKKIFILTNSE-YSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT  265 (458)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSC-HHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCC
T ss_pred             ChhHHHHHHHHHHcCCeEEEEecCc-HHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCc
Confidence            3778999999999999999999998 7777776664 3        55668877411111                    


Q ss_pred             -------CCCc---HHHHHHHHHHcCCCCCcEEEEeCCcc-cHHHHH-HcCCeEEEECCCCC
Q 032106           56 -------WSHK---TDHFQRIHSRTGVPFNSMLFFDDEDR-NIDAVS-KMGVTGILVGNGVN  105 (147)
Q Consensus        56 -------~kp~---~~~~~~~~~~~~~~~~~~v~VgDs~~-Di~~a~-~~Gi~~i~v~~~~~  105 (147)
                             .++.   ......+.+-+|....+++||||++. ||..++ ..||+|++|.....
T Consensus       266 l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ELe  327 (458)
T d2bdea1         266 MTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELG  327 (458)
T ss_dssp             EEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTHH
T ss_pred             cccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHHH
Confidence                   0111   11235666778888899999999988 977776 57999999987653

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.38  E-value=1.3e-06  Score=59.93  Aligned_cols=93  Identities=14%  Similarity=0.082  Sum_probs=65.8

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCccccccc-------------------------ceecCCCCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVA-------------------------KEIFSSWSH   58 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~-------------------------~~~~~~~kp   58 (147)
                      +-|+++++|+.|++.|+++.++|+-+ ...+..+.+++|+...-..                         ...+...  
T Consensus        21 ~R~~~~~~I~~l~~~GI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--   97 (168)
T d1wpga2          21 PRKEVMGSIQLCRDAGIRVIMITGDN-KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV--   97 (168)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC--
T ss_pred             CchhHHHHHHHHHHCcCEEEEECCCC-HHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc--
Confidence            56899999999999999999999555 8889999999998532111                         1222222  


Q ss_pred             cHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEE
Q 032106           59 KTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGIL   99 (147)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~   99 (147)
                      .|+.-..+.+.+.-....+.|+||+.+|..+.+.+.+....
T Consensus        98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~  138 (168)
T d1wpga2          98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM  138 (168)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence            23322333333333336799999999999999999977433

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.34  E-value=8e-07  Score=63.94  Aligned_cols=47  Identities=15%  Similarity=0.225  Sum_probs=40.0

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      ...|...+..+++.++++++++++|||+.+|+.+.+.+|.. +.+.++
T Consensus       205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na  251 (283)
T d2b30a1         205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA  251 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred             cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE-EEeCCC
Confidence            34678889999999999999999999999999999999976 444443

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.29  E-value=3e-06  Score=59.47  Aligned_cols=47  Identities=11%  Similarity=-0.016  Sum_probs=39.2

Q ss_pred             CCCcHHHHHHHHHHcC-CCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           56 WSHKTDHFQRIHSRTG-VPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~-~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .-.|......++++++ +.++++++|||+.+|+.+.+.+|.. +.+..+
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~-va~~Na  224 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSL  224 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSC
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcE-EEeCCC
Confidence            4457888889999985 8889999999999999999999966 555554

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.15  E-value=8.1e-06  Score=57.73  Aligned_cols=46  Identities=17%  Similarity=0.206  Sum_probs=40.1

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~  102 (147)
                      ...|....+.+++++|++++++++|||+.+|+.+.+.+|.. +.+.+
T Consensus       160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~-vav~n  205 (244)
T d1s2oa1         160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN  205 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred             ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcE-EEeCC
Confidence            56688899999999999999999999999999999999865 44444

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.66  E-value=8.5e-05  Score=52.82  Aligned_cols=47  Identities=15%  Similarity=0.321  Sum_probs=41.5

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .-.|...++.+++++|++++++++|||+.+|+.+.+.+|.. +.+..+
T Consensus       184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na  230 (260)
T d2rbka1         184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQA  230 (260)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeE-EEeCCC
Confidence            45788899999999999999999999999999999999995 566554

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.00013  Score=52.01  Aligned_cols=50  Identities=12%  Similarity=0.249  Sum_probs=42.2

Q ss_pred             cCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCeEEEECCC
Q 032106           53 FSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNG  103 (147)
Q Consensus        53 ~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~~i~v~~~  103 (147)
                      .+..-.|...++.+++++|++++++++|||+.+|+.+.+.+|.. +.+..+
T Consensus       185 ~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na  234 (267)
T d1nf2a_         185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENA  234 (267)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTS
T ss_pred             cCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCCC
Confidence            33345789999999999999999999999999999999999975 455443

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00029  Score=48.22  Aligned_cols=89  Identities=16%  Similarity=0.091  Sum_probs=55.5

Q ss_pred             CCchhHHHHHHHHHHCC-CeEEEEcCCCCh--HHH---HHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCc
Q 032106            3 SLYPHAKGILHALKDKG-IDVAVASRSPSP--DIA---NTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNS   76 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g-~~l~i~S~~~~~--~~~---~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~   76 (147)
                      .++||+.++|+.|++.| +.+.|+|.....  ...   ...+++... ..+.....++..|.            .+..  
T Consensus        74 ~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~-~~~~~~~~~t~~K~------------~~~~--  138 (195)
T d1q92a_          74 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-PDFLEQIVLTRDKT------------VVSA--  138 (195)
T ss_dssp             CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-GGGGGGEEECSCST------------TSCC--
T ss_pred             CcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcC-CCCccEEEEccccc------------eecC--
Confidence            57899999999999865 567888865421  111   122333211 11111123333221            1222  


Q ss_pred             EEEEeCCcccHHHHHHcCCeEEEECCCCCh
Q 032106           77 MLFFDDEDRNIDAVSKMGVTGILVGNGVNL  106 (147)
Q Consensus        77 ~v~VgDs~~Di~~a~~~Gi~~i~v~~~~~~  106 (147)
                      -++|+|++.++.++.++|+.+|+...+++.
T Consensus       139 d~lIDD~p~n~~~~~~~g~~~il~~~~~N~  168 (195)
T d1q92a_         139 DLLIDDRPDITGAEPTPSWEHVLFTACHNQ  168 (195)
T ss_dssp             SEEEESCSCCCCSCSSCSSEEEEECCTTTT
T ss_pred             eEEecCcHHHHHHHhcCCCeEEEECCCccc
Confidence            289999999999999999999999876654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00067  Score=46.39  Aligned_cols=44  Identities=16%  Similarity=0.258  Sum_probs=35.0

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCc----ccHHHHHHcCCeEEEECC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDED----RNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~----~Di~~a~~~Gi~~i~v~~  102 (147)
                      .-.|...++.+++   .+++++++|||+.    ||+++-+.+|...+.|..
T Consensus       183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            4556666766653   4789999999986    999999999987787765

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00012  Score=50.16  Aligned_cols=92  Identities=16%  Similarity=0.191  Sum_probs=63.4

Q ss_pred             CchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCC
Q 032106            4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDE   83 (147)
Q Consensus         4 ~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs   83 (147)
                      ..||+.++|+.+.+. +.++|.|.+. +..++.+++.++-..+|...-....+......+.+-++.+|.+.+++|+|+|+
T Consensus        56 ~RP~l~eFL~~l~~~-yei~I~Ta~~-~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~  133 (181)
T d1ta0a_          56 KRPHVDEFLQRMGEL-FECVLFTASL-AKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNS  133 (181)
T ss_dssp             ECTTHHHHHHHHHHH-SEEEEECSSC-HHHHHHHHHHHCSSCCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSC
T ss_pred             cCCCHHHHHHHHHhc-eEEEEEcCCc-HHHHHHHHHHhccCCceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCC
Confidence            479999999999877 9999999776 88889999999876665442000000001111223456678888999999999


Q ss_pred             cccHHHHHHcCCeE
Q 032106           84 DRNIDAVSKMGVTG   97 (147)
Q Consensus        84 ~~Di~~a~~~Gi~~   97 (147)
                      ..-...-...|+..
T Consensus       134 ~~~~~~~~~N~I~I  147 (181)
T d1ta0a_         134 PASYVFHPDNAVPV  147 (181)
T ss_dssp             GGGGTTCGGGBCCC
T ss_pred             hhhhhcCccCeeEe
Confidence            98665444456543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.72  E-value=0.0063  Score=41.09  Aligned_cols=42  Identities=14%  Similarity=0.143  Sum_probs=30.4

Q ss_pred             CCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHHcCCe-EEEECC
Q 032106           56 WSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT-GILVGN  102 (147)
Q Consensus        56 ~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~~Gi~-~i~v~~  102 (147)
                      .-.|...++.+++     .+++++|||+.+|+.+.+.+|.. ++.++.
T Consensus       157 g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~  199 (229)
T d1u02a_         157 GVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKVGE  199 (229)
T ss_dssp             TCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred             CCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEeCC
Confidence            4556666666654     36799999999999999988764 344443

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.39  E-value=0.0046  Score=44.34  Aligned_cols=93  Identities=14%  Similarity=0.230  Sum_probs=63.8

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccc-------cc---------------------------
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSM-------FV---------------------------   48 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~-------f~---------------------------   48 (147)
                      .+.||+.++|+.|.+. .+-+|+|-+. ...++.++..+|+...       ++                           
T Consensus        81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY-~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel  158 (308)
T d1y8aa1          81 KFVPDAEKAMATLQER-WTPVVISTSY-TQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL  158 (308)
T ss_dssp             CBCTTHHHHHHHHHTT-CEEEEEEEEE-HHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred             eecCCHHHHHHHHHhh-CCcEEEeccH-HHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHH
Confidence            5789999999999887 8889998565 7778999999988521       00                           


Q ss_pred             ------------------cceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCcccHHHHHH---cCCeEEEE
Q 032106           49 ------------------AKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSK---MGVTGILV  100 (147)
Q Consensus        49 ------------------~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~Di~~a~~---~Gi~~i~v  100 (147)
                                        .+..++. -.+....+.++...++.+.  ++||||..|+++.+.   .|--+|.+
T Consensus       159 ~e~~d~~f~~~e~~~i~e~Vk~VGg-g~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGlaIsF  228 (308)
T d1y8aa1         159 FRKLDELFSRSEVRKIVESVKAVGA-GEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGVAIAF  228 (308)
T ss_dssp             HHHHHHHHHSHHHHHHHHTCBCCCH-HHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHhccchHhhHHhhhcccCC-chhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCeeEEe
Confidence                              0011111 2244556677777888764  999999999776554   43344444

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.039  Score=37.43  Aligned_cols=98  Identities=11%  Similarity=0.097  Sum_probs=61.6

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCCCCcEEEEeCCccc
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRN   86 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgDs~~D   86 (147)
                      ++..+|..+++.+-++++++..+....++.+.+.++++-.+-   .+    .+++-.+.+++++.-..-+ ++|||... 
T Consensus        82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~~---~~----~~~~e~~~~v~~l~~~G~~-vVVG~~~~-  152 (186)
T d2pjua1          82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQR---SY----ITEEDARGQINELKANGTE-AVVGAGLI-  152 (186)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEE---EE----SSHHHHHHHHHHHHHTTCC-EEEESHHH-
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEEE---Ee----cCHHHHHHHHHHHHHCCCC-EEECChHH-
Confidence            456667777777899999996665666677888888752211   11    1233333344433222233 56999866 


Q ss_pred             HHHHHHcCCeEEEECCCCChHHHHHHHHHH
Q 032106           87 IDAVSKMGVTGILVGNGVNLGALRQGLTKF  116 (147)
Q Consensus        87 i~~a~~~Gi~~i~v~~~~~~~~~~~~l~~~  116 (147)
                      ...|+++|+..+++..+   ++..+++++-
T Consensus       153 ~~~A~~~Gl~~vli~S~---eSv~~Ai~~A  179 (186)
T d2pjua1         153 TDLAEEAGMTGIFIYSA---ATVRQAFSDA  179 (186)
T ss_dssp             HHHHHHTTSEEEESSCH---HHHHHHHHHH
T ss_pred             HHHHHHcCCCEEEEeCH---HHHHHHHHHH
Confidence            46789999999999653   4555555543

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.0094  Score=40.42  Aligned_cols=32  Identities=16%  Similarity=0.314  Sum_probs=26.2

Q ss_pred             CCCCCcEEEEeC----CcccHHHHHHcCCeEEEECC
Q 032106           71 GVPFNSMLFFDD----EDRNIDAVSKMGVTGILVGN  102 (147)
Q Consensus        71 ~~~~~~~v~VgD----s~~Di~~a~~~Gi~~i~v~~  102 (147)
                      +..++++++|||    +.||+++.+.+|...+++..
T Consensus       195 ~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         195 NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            567899999999    56999999999977777755

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=92.54  E-value=0.17  Score=31.86  Aligned_cols=27  Identities=7%  Similarity=0.110  Sum_probs=24.9

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP   29 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~   29 (147)
                      .|.+++.+.|+.|++.|+.+.|.|.+.
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            578999999999999999999999764

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=91.89  E-value=0.13  Score=32.24  Aligned_cols=42  Identities=14%  Similarity=0.055  Sum_probs=32.4

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCChH--HHHHHHHhcCcc
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSPSPD--IANTFLEKLNIK   44 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~~~~--~~~~~l~~~gl~   44 (147)
                      .|+|++.+.|+.|++.|+.+.+.|.+....  .....|...|+.
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~   64 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   64 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence            578999999999999999999999776321  123456666765

>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: ThiG-like
family: ThiG-like
domain: Thiazole biosynthesis protein ThiG
species: Bacillus subtilis [TaxId: 1423]

Probab=91.26  E-value=1.6  Score=30.43  Aligned_cols=106  Identities=16%  Similarity=0.221  Sum_probs=76.2

Q ss_pred             CCchhHHHHHH---HHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecC--CCCCcHHHHHHHHHHcCCCCCcE
Q 032106            3 SLYPHAKGILH---ALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFS--SWSHKTDHFQRIHSRTGVPFNSM   77 (147)
Q Consensus         3 ~~~pgv~~~L~---~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~--~~kp~~~~~~~~~~~~~~~~~~~   77 (147)
                      .++|+..++|+   .|-+.|+.|...++.+ +..+++ |+..|-.-.+.....++  ..-.++..++.++++.++    .
T Consensus       106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D-~v~ak~-Le~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~~~~~v----P  179 (251)
T d1xm3a_         106 SLLPDPVETLKASEQLLEEGFIVLPYTSDD-VVLARK-LEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKV----P  179 (251)
T ss_dssp             TCCBCHHHHHHHHHHHHHTTCCEEEEECSC-HHHHHH-HHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSS----C
T ss_pred             CcCCCHHHHHHHHHHHHhCCcEEEEecCCC-HHHHHH-HHHcCChhHHHhhhhhhcCCCcCChHHHHHHHhcCCc----c
Confidence            47888877775   5668899999999666 777654 77788766665543332  356789999999988776    3


Q ss_pred             EEEeCCc---ccHHHHHHcCCeEEEECCC----CChHHHHHHHH
Q 032106           78 LFFDDED---RNIDAVSKMGVTGILVGNG----VNLGALRQGLT  114 (147)
Q Consensus        78 v~VgDs~---~Di~~a~~~Gi~~i~v~~~----~~~~~~~~~l~  114 (147)
                      |+|+-+.   .|...|-++|...++++..    .++-.+.+++.
T Consensus       180 vIvDAGIG~pSdAa~AMElG~daVLvNTAIA~a~dPv~MA~A~~  223 (251)
T d1xm3a_         180 VIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMK  223 (251)
T ss_dssp             BEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred             EEEecCCCCHHHHHHHHHccCCEEEechhhhcCCCHHHHHHHHH
Confidence            7787764   4888888999999999753    34444554444

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=90.53  E-value=0.079  Score=36.74  Aligned_cols=27  Identities=7%  Similarity=0.295  Sum_probs=24.2

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCC
Q 032106            3 SLYPHAKGILHALKDKGIDVAVASRSP   29 (147)
Q Consensus         3 ~~~pgv~~~L~~L~~~g~~l~i~S~~~   29 (147)
                      .++|++.++|+.|++.|++++++||+.
T Consensus        18 ~~i~~a~e~l~~l~~~g~~~~~~TN~s   44 (253)
T d1wvia_          18 DRIPAGEDFVKRLQERQLPYILVTNNT   44 (253)
T ss_dssp             EECHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred             CcCccHHHHHHHHHHCCCCEEEEeCCC
Confidence            357999999999999999999999864

>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase beta subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=86.14  E-value=0.76  Score=29.98  Aligned_cols=61  Identities=15%  Similarity=0.028  Sum_probs=34.9

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCChHHHHHHHHhcCcccccccceecCCCCCcHHHHHHHHHHcCCC
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVP   73 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~kp~~~~~~~~~~~~~~~   73 (147)
                      .+.++++.|+..|....++-++..+......+...|++.||..      .-+-.+....+++++|+.
T Consensus       102 ~~~~~~~aLk~ag~~~~vlaGg~~~~~d~~~l~~aGVd~~i~~------G~d~~~~l~~l~~~lGva  162 (163)
T d7reqb2         102 QGLEVAKALKAAGAKALYLSGAFKEFGDDAAEAEKLIDGRLFM------GMDVVDTLSSTLDILGVA  162 (163)
T ss_dssp             HHHHHHHHHHHTTCSEEEEESCGGGGGGGHHHHHHHCCEEECT------TCCHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhcccceeEEEecCCCcccHHHHHhCCCCeEecC------CCcHHHHHHHHHHHhcCC
Confidence            3456666777666665555544322222345666677666543      224566777777777764

>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=84.58  E-value=0.93  Score=30.94  Aligned_cols=113  Identities=13%  Similarity=0.197  Sum_probs=69.1

Q ss_pred             hHHHHHHHHHHCCCeEEEEcCCCCh-HHHHHHHHhcCccccccc--c-eecCCCCCcHHHHHHHHHHcCCCCCcEEEEeC
Q 032106            7 HAKGILHALKDKGIDVAVASRSPSP-DIANTFLEKLNIKSMFVA--K-EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDD   82 (147)
Q Consensus         7 gv~~~L~~L~~~g~~l~i~S~~~~~-~~~~~~l~~~gl~~~f~~--~-~~~~~~kp~~~~~~~~~~~~~~~~~~~v~VgD   82 (147)
                      ...++++.+++.|.+.+|+-|...+ ......+..++..++.-.  + -.++..+..+..+.++.+--...++--+.|+=
T Consensus        96 ~~~~~i~~i~~~g~~~Glal~p~t~~~~~~~~l~~~~~~d~vlim~v~PG~~GQ~f~~~~l~kI~~l~~~~~~~~I~VDG  175 (220)
T d1h1ya_          96 NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDG  175 (220)
T ss_dssp             THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEES
T ss_pred             hHHHHHHHHHHcCCCcceeeccccchhHHHHHHhcccccceEEEEecCCCCcccccchhhhHHHHHHHhcCCCceEEEEe
Confidence            3567889999999999999965532 233445554443222211  1 23444667777776665422234455688877


Q ss_pred             Ccc--cHHHHHHcCCeEEEECCC-CChHHHHHHHHHHHHh
Q 032106           83 EDR--NIDAVSKMGVTGILVGNG-VNLGALRQGLTKFSQN  119 (147)
Q Consensus        83 s~~--Di~~a~~~Gi~~i~v~~~-~~~~~~~~~l~~~~~~  119 (147)
                      +.+  .+....++|+..+.++.. +..+...+.+..+++.
T Consensus       176 GIn~~~i~~l~~aGad~~V~GS~if~~~d~~~~i~~lr~~  215 (220)
T d1h1ya_         176 GLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKS  215 (220)
T ss_dssp             SCSTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence            777  588899999999988753 2223344455555443