Citrus Sinensis ID: 032117

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
MEATSLISLSSFAAGASSLPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHcccEEEEEccHHHHHHccccccEEcccEEEccccccccHHHHHHHHHHcccccEEEEEcccc
ccccccccccHHcccccccccccccccccccccccHHHccccccccEEEEccccccHHHHHHccccHHccccccccHHHHHHHHHcccEEEEEccHHHHHcccccccEEccEEEEccccccccHHHHHHHHHHccccccEEEEcccc
MEATSLISLssfaagasslppvlcphgnnrrgllSLTVdqqrcdnigfisskilsfcpkaslrgnleavgvptsvPVRVAHELLQAGhryldvrtpeefsaghatgainvpymyrvgsgmtknLKFVEEVSTrfrkhdeiivvspci
MEATSLISLSSFAAGASSLPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVstrfrkhdeiivvspci
MEATslislssfaagasslPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
********************PVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVV****
************************************************************************TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
********LSSFAAGASSLPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
******************LPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEATSLISLSSFAAGASSLPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query147 2.2.26 [Sep-21-2011]
Q38853182 Rhodanese-like domain-con no no 0.897 0.725 0.506 2e-30
P27626183 Senescence-associated pro N/A no 0.482 0.387 0.732 2e-25
Q39129120 Thiosulfate sulfurtransfe no no 0.489 0.6 0.708 4e-23
Q9FKW8136 Thiosulfate sulfurtransfe no no 0.469 0.507 0.478 8e-12
Q8RUD6169 Rhodanese-like domain-con no no 0.476 0.414 0.414 4e-10
F4IPI4156 Rhodanese-like domain-con no no 0.469 0.442 0.366 5e-06
>sp|Q38853|STR15_ARATH Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1 Back     alignment and function desciption
 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/150 (50%), Positives = 94/150 (62%), Gaps = 18/150 (12%)

Query: 1   MEATSLISLSSFAAGASSLPPVLCPHGN------NRRGLLSLTVDQQRCDNIGFISSKIL 54
           ME T+  + S     +S++ P L   G+       RRG++   V   R  N  +  +   
Sbjct: 1   METTAFNTTSRIGNWSSAISPPLQTCGSFKCQLPTRRGVI---VADLRNSNFRWRKATTT 57

Query: 55  SFCPKASLRGNL--EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPY 112
           S       RGN+  EAV +PTSVPVRVA EL QAG+RYLDVRTP+EFS GH T AINVPY
Sbjct: 58  S-------RGNVAAEAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPY 110

Query: 113 MYRVGSGMTKNLKFVEEVSTRFRKHDEIIV 142
           MYRVGSGM KN  F+ +VS+ FRKHDEII+
Sbjct: 111 MYRVGSGMVKNPSFLRQVSSHFRKHDEIII 140

Arabidopsis thaliana (taxid: 3702)
>sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1 Back     alignment and function description
>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2 Back     alignment and function description
>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1 Back     alignment and function description
>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1 Back     alignment and function description
>sp|F4IPI4|STR17_ARATH Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana GN=STR17 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query147
224133954180 predicted protein [Populus trichocarpa] 0.931 0.761 0.664 2e-43
255579783182 Senescence-associated protein DIN1, puta 0.945 0.763 0.657 6e-41
359497218177 PREDICTED: senescence-associated protein 0.741 0.615 0.666 2e-33
351728052186 uncharacterized protein LOC100305968 [Gl 0.639 0.505 0.734 8e-33
351726216185 uncharacterized protein LOC100499831 [Gl 0.639 0.508 0.734 5e-32
388501622179 unknown [Lotus japonicus] 0.639 0.525 0.694 5e-31
357483967185 Senescence-associated protein DIN1 [Medi 0.639 0.508 0.705 6e-31
449434108184 PREDICTED: rhodanese-like domain-contain 0.823 0.657 0.616 2e-30
7340289150 OP1 [Cucumis sativus] 0.734 0.72 0.627 1e-29
145334231161 senescence-associated protein DIN1 [Arab 0.897 0.819 0.506 1e-28
>gi|224133954|ref|XP_002327720.1| predicted protein [Populus trichocarpa] gi|222836805|gb|EEE75198.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/143 (66%), Positives = 112/143 (78%), Gaps = 6/143 (4%)

Query: 1   MEATSLISLSSFAAGASSLPPVLCPHG-NNRRGLLSLTVDQQRCDNIGFISSKILSFCPK 59
           M A +++   S +  +++L PVLCP   N RRG+ +  V+ +RC +I  I+ K LSF PK
Sbjct: 1   MAAKAVVCYGS-STSSTTLRPVLCPQQLNKRRGVFA--VNSRRC-SIN-INHKSLSFRPK 55

Query: 60  ASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSG 119
            SLR NLEA G+PTSVPVRVAHEL QAGHRYLDVRTP+EFS GHA GAIN+PYMYRVGSG
Sbjct: 56  TSLRWNLEATGIPTSVPVRVAHELHQAGHRYLDVRTPDEFSTGHAAGAINIPYMYRVGSG 115

Query: 120 MTKNLKFVEEVSTRFRKHDEIIV 142
           MTKN KFVEEVS+ FRKHDEIIV
Sbjct: 116 MTKNPKFVEEVSSHFRKHDEIIV 138

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255579783|ref|XP_002530729.1| Senescence-associated protein DIN1, putative [Ricinus communis] gi|223529693|gb|EEF31635.1| Senescence-associated protein DIN1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359497218|ref|XP_002271073.2| PREDICTED: senescence-associated protein DIN1-like [Vitis vinifera] gi|296088206|emb|CBI35721.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|351728052|ref|NP_001235646.1| uncharacterized protein LOC100305968 [Glycine max] gi|255627141|gb|ACU13915.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|351726216|ref|NP_001236607.1| uncharacterized protein LOC100499831 [Glycine max] gi|255626991|gb|ACU13840.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388501622|gb|AFK38877.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357483967|ref|XP_003612270.1| Senescence-associated protein DIN1 [Medicago truncatula] gi|217071246|gb|ACJ83983.1| unknown [Medicago truncatula] gi|355513605|gb|AES95228.1| Senescence-associated protein DIN1 [Medicago truncatula] gi|388495624|gb|AFK35878.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449434108|ref|XP_004134838.1| PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic-like [Cucumis sativus] gi|449491287|ref|XP_004158850.1| PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|7340289|gb|AAF61174.1|AF245222_1 OP1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|145334231|ref|NP_001078496.1| senescence-associated protein DIN1 [Arabidopsis thaliana] gi|332661161|gb|AEE86561.1| senescence-associated protein DIN1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query147
TAIR|locus:2128038182 SEN1 "AT4G35770" [Arabidopsis 0.544 0.439 0.743 8.2e-28
UNIPROTKB|B2C7Y6185 NRIP1 "Chloroplast N receptor- 0.687 0.545 0.598 7.6e-25
TAIR|locus:2156937120 STR16 "AT5G66040" [Arabidopsis 0.489 0.6 0.708 9e-22
TAIR|locus:2156882138 STR18 "AT5G66170" [Arabidopsis 0.551 0.586 0.440 1.9e-12
TAIR|locus:505006261169 AT2G21045 [Arabidopsis thalian 0.469 0.408 0.420 9.4e-11
TAIR|locus:2827795156 AT2G17850 "AT2G17850" [Arabido 0.673 0.634 0.310 1.8e-07
UNIPROTKB|Q8ECN1132 SO_3105 "Periplasmic rhodanese 0.238 0.265 0.542 5.5e-06
TIGR_CMR|SO_3105132 SO_3105 "phage shock protein E 0.238 0.265 0.542 5.5e-06
UNIPROTKB|Q8E992108 SO_4394 "Cytoplasmic rhodanese 0.204 0.277 0.566 6.3e-05
TIGR_CMR|SO_4394108 SO_4394 "phage shock protein E 0.204 0.277 0.566 6.3e-05
TAIR|locus:2128038 SEN1 "AT4G35770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 61/82 (74%), Positives = 69/82 (84%)

Query:    63 RGNL--EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGM 120
             RGN+  EAV +PTSVPVRVA EL QAG+RYLDVRTP+EFS GH T AINVPYMYRVGSGM
Sbjct:    59 RGNVAAEAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYMYRVGSGM 118

Query:   121 TKNLKFVEEVSTRFRKHDEIIV 142
              KN  F+ +VS+ FRKHDEII+
Sbjct:   119 VKNPSFLRQVSSHFRKHDEIII 140
GO:0003674 "molecular_function" evidence=ND
GO:0007568 "aging" evidence=IEP;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0006979 "response to oxidative stress" evidence=IEP
GO:0009611 "response to wounding" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
UNIPROTKB|B2C7Y6 NRIP1 "Chloroplast N receptor-interacting protein 1" [Nicotiana benthamiana (taxid:4100)] Back     alignment and assigned GO terms
TAIR|locus:2156937 STR16 "AT5G66040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156882 STR18 "AT5G66170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006261 AT2G21045 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827795 AT2G17850 "AT2G17850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8ECN1 SO_3105 "Periplasmic rhodanese domain protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3105 SO_3105 "phage shock protein E" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q8E992 SO_4394 "Cytoplasmic rhodanese domain protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_4394 SO_4394 "phage shock protein E" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_570018
hypothetical protein (181 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query147
PLN02160136 PLN02160, PLN02160, thiosulfate sulfurtransferase 8e-16
pfam00581106 pfam00581, Rhodanese, Rhodanese-like domain 7e-09
cd0015889 cd00158, RHOD, Rhodanese Homology Domain (RHOD); a 4e-07
smart00450100 smart00450, RHOD, Rhodanese Homology Domain 6e-07
PRK11784 345 PRK11784, PRK11784, tRNA 2-selenouridine synthase; 7e-05
cd0152490 cd01524, RHOD_Pyr_redox, Member of the Rhodanese H 1e-04
cd0153495 cd01534, 4RHOD_Repeat_3, Member of the Rhodanese H 3e-04
PRK10287104 PRK10287, PRK10287, thiosulfate:cyanide sulfurtran 7e-04
TIGR03167 311 TIGR03167, tRNA_sel_U_synt, tRNA 2-selenouridine s 0.001
cd01519106 cd01519, RHOD_HSP67B2, Member of the Rhodanese Hom 0.002
PRK08762 376 PRK08762, PRK08762, molybdopterin biosynthesis pro 0.002
PRK00162108 PRK00162, glpE, thiosulfate sulfurtransferase; Val 0.003
cd01520128 cd01520, RHOD_YbbB, Member of the Rhodanese Homolo 0.003
TIGR02981101 TIGR02981, phageshock_pspE, phage shock operon rho 0.003
COG0607110 COG0607, PspE, Rhodanese-related sulfurtransferase 0.003
>gnl|CDD|177819 PLN02160, PLN02160, thiosulfate sulfurtransferase Back     alignment and domain information 
 Score = 69.0 bits (168), Expect = 8e-16
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 2/71 (2%)

Query: 74  SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKNLKFVEEVS 131
           SV V  A  LLQ+GH+YLDVRT +EF  GH   A  +N+PYM     G  KN +F+E+VS
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 132 TRFRKHDEIIV 142
           +     D+I+V
Sbjct: 76  SLLNPADDILV 86

Length = 136
>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain Back     alignment and domain information
>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein Back     alignment and domain information
>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain Back     alignment and domain information
>gnl|CDD|236982 PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional Back     alignment and domain information
>gnl|CDD|238782 cd01524, RHOD_Pyr_redox, Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>gnl|CDD|238792 cd01534, 4RHOD_Repeat_3, Member of the Rhodanese Homology Domain superfamily, repeat 3 Back     alignment and domain information
>gnl|CDD|182356 PRK10287, PRK10287, thiosulfate:cyanide sulfurtransferase; Provisional Back     alignment and domain information
>gnl|CDD|234132 TIGR03167, tRNA_sel_U_synt, tRNA 2-selenouridine synthase Back     alignment and domain information
>gnl|CDD|238777 cd01519, RHOD_HSP67B2, Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>gnl|CDD|236337 PRK08762, PRK08762, molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>gnl|CDD|178908 PRK00162, glpE, thiosulfate sulfurtransferase; Validated Back     alignment and domain information
>gnl|CDD|238778 cd01520, RHOD_YbbB, Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>gnl|CDD|132026 TIGR02981, phageshock_pspE, phage shock operon rhodanese PspE Back     alignment and domain information
>gnl|CDD|223680 COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 147
KOG1530136 consensus Rhodanese-related sulfurtransferase [Ino 99.71
cd01533109 4RHOD_Repeat_2 Member of the Rhodanese Homology Do 99.63
cd01523100 RHOD_Lact_B Member of the Rhodanese Homology Domai 99.61
cd01518101 RHOD_YceA Member of the Rhodanese Homology Domain 99.61
PLN02160136 thiosulfate sulfurtransferase 99.61
cd0153495 4RHOD_Repeat_3 Member of the Rhodanese Homology Do 99.59
cd0152799 RHOD_YgaP Member of the Rhodanese Homology Domain 99.58
cd01520128 RHOD_YbbB Member of the Rhodanese Homology Domain 99.58
cd0152490 RHOD_Pyr_redox Member of the Rhodanese Homology Do 99.56
PRK00162108 glpE thiosulfate sulfurtransferase; Validated 99.55
cd01530121 Cdc25 Cdc25 phosphatases are members of the Rhodan 99.54
cd01519106 RHOD_HSP67B2 Member of the Rhodanese Homology Doma 99.54
cd01521110 RHOD_PspE2 Member of the Rhodanese Homology Domain 99.53
cd01522117 RHOD_1 Member of the Rhodanese Homology Domain sup 99.52
cd01526122 RHOD_ThiF Member of the Rhodanese Homology Domain 99.51
cd01528101 RHOD_2 Member of the Rhodanese Homology Domain sup 99.51
cd0144496 GlpE_ST GlpE sulfurtransferase (ST) and homologs a 99.5
cd01449118 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), 99.48
cd01448122 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), 99.47
COG2897285 SseA Rhodanese-related sulfurtransferase [Inorgani 99.47
cd01447103 Polysulfide_ST Polysulfide-sulfurtransferase - Rho 99.46
cd01525105 RHOD_Kc Member of the Rhodanese Homology Domain su 99.46
PRK07411390 hypothetical protein; Validated 99.45
PF00581113 Rhodanese: Rhodanese-like domain This Prosite entr 99.44
cd01443113 Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda 99.42
PRK07878392 molybdopterin biosynthesis-like protein MoeZ; Vali 99.4
cd01531113 Acr2p Eukaryotic arsenate resistance proteins are 99.39
cd0152996 4RHOD_Repeats Member of the Rhodanese Homology Dom 99.39
cd0153292 4RHOD_Repeat_1 Member of the Rhodanese Homology Do 99.36
TIGR03865162 PQQ_CXXCW PQQ-dependent catabolism-associated CXXC 99.33
PRK08762 376 molybdopterin biosynthesis protein MoeB; Validated 99.33
PRK05320257 rhodanese superfamily protein; Provisional 99.33
PLN02723320 3-mercaptopyruvate sulfurtransferase 99.32
TIGR02981101 phageshock_pspE phage shock operon rhodanese PspE. 99.32
PRK01415247 hypothetical protein; Validated 99.31
cd01445138 TST_Repeats Thiosulfate sulfurtransferases (TST) c 99.31
PRK10287104 thiosulfate:cyanide sulfurtransferase; Provisional 99.3
PRK11493 281 sseA 3-mercaptopyruvate sulfurtransferase; Provisi 99.3
PRK11493281 sseA 3-mercaptopyruvate sulfurtransferase; Provisi 99.27
cd01446132 DSP_MapKP N-terminal regulatory rhodanese domain o 99.26
smart00450100 RHOD Rhodanese Homology Domain. An alpha beta fold 99.26
PRK00142 314 putative rhodanese-related sulfurtransferase; Prov 99.25
cd01535145 4RHOD_Repeat_4 Member of the Rhodanese Homology Do 99.25
PRK05600370 thiamine biosynthesis protein ThiF; Validated 99.24
cd0015889 RHOD Rhodanese Homology Domain (RHOD); an alpha be 99.23
PRK09629 610 bifunctional thiosulfate sulfurtransferase/phospha 99.22
PRK09629 610 bifunctional thiosulfate sulfurtransferase/phospha 99.21
COG0607110 PspE Rhodanese-related sulfurtransferase [Inorgani 99.2
PRK11784 345 tRNA 2-selenouridine synthase; Provisional 99.19
PLN02723 320 3-mercaptopyruvate sulfurtransferase 99.12
PRK05597355 molybdopterin biosynthesis protein MoeB; Validated 99.07
TIGR03167 311 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The 99.01
PRK01269482 tRNA s(4)U8 sulfurtransferase; Provisional 99.01
KOG2017427 consensus Molybdopterin synthase sulfurylase [Coen 98.84
KOG3772325 consensus M-phase inducer phosphatase [Cell cycle 98.59
COG2897 285 SseA Rhodanese-related sulfurtransferase [Inorgani 98.49
COG1054 308 Predicted sulfurtransferase [General function pred 98.36
KOG1529286 consensus Mercaptopyruvate sulfurtransferase/thios 98.18
PF04273110 DUF442: Putative phosphatase (DUF442); InterPro: I 97.02
TIGR01244135 conserved hypothetical protein TIGR01244. No membe 96.87
COG5105 427 MIH1 Mitotic inducer, protein phosphatase [Cell di 96.79
KOG1529 286 consensus Mercaptopyruvate sulfurtransferase/thios 96.6
COG2603 334 Predicted ATPase [General function prediction only 95.62
PRK00142 314 putative rhodanese-related sulfurtransferase; Prov 95.62
PF13350164 Y_phosphatase3: Tyrosine phosphatase family; PDB: 94.54
PLN02727 986 NAD kinase 93.54
COG3453130 Uncharacterized protein conserved in bacteria [Fun 92.29
cd00127139 DSPc Dual specificity phosphatases (DSP); Ser/Thr 91.44
TIGR03167 311 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The 90.85
smart00195138 DSPc Dual specificity phosphatase, catalytic domai 90.27
COG1891 235 Uncharacterized protein conserved in archaea [Func 87.46
KOG1093725 consensus Predicted protein kinase (contains TBC a 85.43
>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=99.71  E-value=3e-17  Score=115.34  Aligned_cols=78  Identities=41%  Similarity=0.600  Sum_probs=69.4

Q ss_pred             CCCcccCHHHHHHHHhCC-CeEEEeCChHHHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHhhccC-CCCeEEEEcCCC
Q 032117           70 GVPTSVPVRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR-KHDEIIVVSPCI  147 (147)
Q Consensus        70 ~~~~~Is~~el~~~~~~~-~~lIDVR~~~e~~~ghIpGAinip~~~~~~~~~~~~~~~l~~~~~~l~-~d~~IVvyC~s~  147 (147)
                      ..+..++.++++++++.+ .++||||+|+||..||+|.++|||+......++..+++|++++....+ .|++|||+|+||
T Consensus        20 ~~~~sv~~~qvk~L~~~~~~~llDVRepeEfk~gh~~~siNiPy~~~~~~~~l~~~eF~kqvg~~kp~~d~eiIf~C~SG   99 (136)
T KOG1530|consen   20 SNPQSVSVEQVKNLLQHPDVVLLDVREPEEFKQGHIPASINIPYMSRPGAGALKNPEFLKQVGSSKPPHDKEIIFGCASG   99 (136)
T ss_pred             CCcEEEEHHHHHHHhcCCCEEEEeecCHHHhhccCCcceEeccccccccccccCCHHHHHHhcccCCCCCCcEEEEeccC
Confidence            456789999999999987 899999999999999999999999986666778889999999887766 466999999997

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2 Back     alignment and domain information
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>PLN02160 thiosulfate sulfurtransferase Back     alignment and domain information
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3 Back     alignment and domain information
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>PRK00162 glpE thiosulfate sulfurtransferase; Validated Back     alignment and domain information
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1 Back     alignment and domain information
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2 Back     alignment and domain information
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain Back     alignment and domain information
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain Back     alignment and domain information
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain Back     alignment and domain information
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>PRK07411 hypothetical protein; Validated Back     alignment and domain information
>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family Back     alignment and domain information
>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily Back     alignment and domain information
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated Back     alignment and domain information
>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily Back     alignment and domain information
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1 Back     alignment and domain information
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PRK05320 rhodanese superfamily protein; Provisional Back     alignment and domain information
>PLN02723 3-mercaptopyruvate sulfurtransferase Back     alignment and domain information
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE Back     alignment and domain information
>PRK01415 hypothetical protein; Validated Back     alignment and domain information
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain Back     alignment and domain information
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional Back     alignment and domain information
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional Back     alignment and domain information
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional Back     alignment and domain information
>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase Back     alignment and domain information
>smart00450 RHOD Rhodanese Homology Domain Back     alignment and domain information
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional Back     alignment and domain information
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4 Back     alignment and domain information
>PRK05600 thiamine biosynthesis protein ThiF; Validated Back     alignment and domain information
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein Back     alignment and domain information
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional Back     alignment and domain information
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional Back     alignment and domain information
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11784 tRNA 2-selenouridine synthase; Provisional Back     alignment and domain information
>PLN02723 3-mercaptopyruvate sulfurtransferase Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1054 Predicted sulfurtransferase [General function prediction only] Back     alignment and domain information
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms] Back     alignment and domain information
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function Back     alignment and domain information
>TIGR01244 conserved hypothetical protein TIGR01244 Back     alignment and domain information
>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms] Back     alignment and domain information
>COG2603 Predicted ATPase [General function prediction only] Back     alignment and domain information
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional Back     alignment and domain information
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases Back     alignment and domain information
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase Back     alignment and domain information
>smart00195 DSPc Dual specificity phosphatase, catalytic domain Back     alignment and domain information
>COG1891 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query147
1tq1_A129 Solution Structure Of At5g66040, A Putative Protein 2e-24
>pdb|1TQ1|A Chain A, Solution Structure Of At5g66040, A Putative Protein From Arabidosis Thaliana Length = 129 Back     alignment and structure 
Iteration: 1

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 58/72 (80%)
Query: 71  VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEV 130
           VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM R  SGM+KN  F+E+V
Sbjct: 16  VPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQV 75
Query: 131 STRFRKHDEIIV 142
           S+ F + D IIV
Sbjct: 76  SSHFGQSDNIIV 87

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query147
1tq1_A129 AT5G66040, senescence-associated family protein; C 2e-25
1wv9_A94 Rhodanese homolog TT1651; CDC25, phosphatase, sulf 5e-09
3hix_A106 ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q 4e-08
2jtq_A85 Phage shock protein E; solution structure rhodanes 4e-08
3ilm_A141 ALR3790 protein; rhodanese-like, NSR437H, NESG, st 4e-08
2k0z_A110 Uncharacterized protein HP1203; A/B domain, struct 6e-08
3g5j_A134 Putative ATP/GTP binding protein; N-terminal domai 1e-07
3d1p_A139 Putative thiosulfate sulfurtransferase YOR285W; at 1e-07
1gmx_A108 GLPE protein; transferase, rhodanese, sulfurtransf 2e-07
3nhv_A144 BH2092 protein; alpha-beta protein, structural gen 6e-07
3gk5_A108 Uncharacterized rhodanese-related protein TVG08686 1e-06
3eme_A103 Rhodanese-like domain protein; alpha-beta-alpha sa 2e-06
3foj_A100 Uncharacterized protein; protein SSP1007, structur 2e-06
1yt8_A 539 Thiosulfate sulfurtransferase; rhodanase domains, 4e-06
1yt8_A539 Thiosulfate sulfurtransferase; rhodanase domains, 3e-05
1yt8_A 539 Thiosulfate sulfurtransferase; rhodanase domains, 8e-05
1yt8_A 539 Thiosulfate sulfurtransferase; rhodanase domains, 4e-04
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 5e-06
2a2k_A175 M-phase inducer phosphatase 2; dual specificity, s 9e-06
2fsx_A148 RV0390, COG0607: rhodanese-related sulfurtransfera 1e-05
1qb0_A211 Protein (M-phase inducer phosphatase 2 (CDC25B)); 1e-05
3flh_A124 Uncharacterized protein LP_1913; alpha-beta protei 1e-05
1vee_A134 Proline-rich protein family; hypothetical protein, 1e-05
1t3k_A152 Arath CDC25, dual-specificity tyrosine phosphatase 2e-05
3i2v_A127 Adenylyltransferase and sulfurtransferase MOCS3; r 2e-05
1c25_A161 CDC25A; hydrolase, cell cycle phosphatase,dual spe 4e-05
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 5e-05
3tp9_A474 Beta-lactamase and rhodanese domain protein; struc 5e-05
2j6p_A152 SB(V)-AS(V) reductase; arsenate reductase, antimon 5e-04
3op3_A216 M-phase inducer phosphatase 3; structural genomics 5e-04
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129 Back     alignment and structure
 Score = 92.5 bits (230), Expect = 2e-25
 Identities = 52/77 (67%), Positives = 59/77 (76%)

Query: 67  EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKF 126
           E   VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM R  SGM+KN  F
Sbjct: 12  EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDF 71

Query: 127 VEEVSTRFRKHDEIIVV 143
           +E+VS+ F + D IIV 
Sbjct: 72  LEQVSSHFGQSDNIIVG 88
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} Length = 94 Back     alignment and structure
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106 Back     alignment and structure
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Length = 85 Back     alignment and structure
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141 Back     alignment and structure
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110 Back     alignment and structure
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile} Length = 134 Back     alignment and structure
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139 Back     alignment and structure
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108 Back     alignment and structure
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144 Back     alignment and structure
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1} Length = 108 Back     alignment and structure
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp} Length = 100 Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539 Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539 Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539 Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539 Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Length = 588 Back     alignment and structure
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A Length = 175 Back     alignment and structure
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis} Length = 148 Back     alignment and structure
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A Length = 211 Back     alignment and structure
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124 Back     alignment and structure
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A Length = 134 Back     alignment and structure
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152 Back     alignment and structure
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} Length = 127 Back     alignment and structure
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Length = 161 Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Length = 565 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474 Back     alignment and structure
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Length = 152 Back     alignment and structure
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens} Length = 216 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query147
3iwh_A103 Rhodanese-like domain protein; alpha-beta-alpha sa 99.74
1tq1_A129 AT5G66040, senescence-associated family protein; C 99.74
3foj_A100 Uncharacterized protein; protein SSP1007, structur 99.69
3gk5_A108 Uncharacterized rhodanese-related protein TVG08686 99.68
3eme_A103 Rhodanese-like domain protein; alpha-beta-alpha sa 99.68
1gmx_A108 GLPE protein; transferase, rhodanese, sulfurtransf 99.68
3d1p_A139 Putative thiosulfate sulfurtransferase YOR285W; at 99.66
1wv9_A94 Rhodanese homolog TT1651; CDC25, phosphatase, sulf 99.65
3flh_A124 Uncharacterized protein LP_1913; alpha-beta protei 99.6
3ilm_A141 ALR3790 protein; rhodanese-like, NSR437H, NESG, st 99.58
3hix_A106 ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q 99.58
1qxn_A137 SUD, sulfide dehydrogenase; polysulfide-sulfur tra 99.57
2hhg_A139 Hypothetical protein RPA3614; MCSG, structural gen 99.57
3nhv_A144 BH2092 protein; alpha-beta protein, structural gen 99.57
3g5j_A134 Putative ATP/GTP binding protein; N-terminal domai 99.54
2vsw_A153 Dual specificity protein phosphatase 16; hydrolase 99.54
3i2v_A127 Adenylyltransferase and sulfurtransferase MOCS3; r 99.52
1t3k_A152 Arath CDC25, dual-specificity tyrosine phosphatase 99.51
2k0z_A110 Uncharacterized protein HP1203; A/B domain, struct 99.51
2fsx_A148 RV0390, COG0607: rhodanese-related sulfurtransfera 99.51
2jtq_A85 Phage shock protein E; solution structure rhodanes 99.5
1urh_A280 3-mercaptopyruvate sulfurtransferase; rhodanese; 2 99.5
3hzu_A318 Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, 99.48
3olh_A302 MST, 3-mercaptopyruvate sulfurtransferase; structu 99.48
1c25_A161 CDC25A; hydrolase, cell cycle phosphatase,dual spe 99.46
1rhs_A296 Sulfur-substituted rhodanese; transferase, sulfurt 99.46
1hzm_A154 Dual specificity protein phosphatase 6; hydrolase; 99.45
1e0c_A 271 Rhodanese, sulfurtransferase; sulfur metabolism, t 99.45
1uar_A285 Rhodanese; sulfurtransferase, riken structural gen 99.44
1qb0_A211 Protein (M-phase inducer phosphatase 2 (CDC25B)); 99.44
3op3_A216 M-phase inducer phosphatase 3; structural genomics 99.43
1vee_A134 Proline-rich protein family; hypothetical protein, 99.42
2ouc_A142 Dual specificity protein phosphatase 10; rhodanese 99.41
2a2k_A175 M-phase inducer phosphatase 2; dual specificity, s 99.41
1e0c_A271 Rhodanese, sulfurtransferase; sulfur metabolism, t 99.41
2j6p_A152 SB(V)-AS(V) reductase; arsenate reductase, antimon 99.4
2gwf_A157 Ubiquitin carboxyl-terminal hydrolase 8; protein-p 99.4
3f4a_A169 Uncharacterized protein YGR203W; protein phosphata 99.39
3hzu_A 318 Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, 99.39
3tg1_B158 Dual specificity protein phosphatase 10; kinase/rh 99.39
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 99.39
1whb_A157 KIAA0055; deubiqutinating enzyme, UBPY, structural 99.38
4f67_A265 UPF0176 protein LPG2838; structural genomics, PSI- 99.38
3aay_A277 Putative thiosulfate sulfurtransferase; sulfurtran 99.38
1urh_A 280 3-mercaptopyruvate sulfurtransferase; rhodanese; 2 99.37
3aay_A 277 Putative thiosulfate sulfurtransferase; sulfurtran 99.36
1yt8_A539 Thiosulfate sulfurtransferase; rhodanase domains, 99.35
3olh_A 302 MST, 3-mercaptopyruvate sulfurtransferase; structu 99.34
1rhs_A 296 Sulfur-substituted rhodanese; transferase, sulfurt 99.33
1uar_A 285 Rhodanese; sulfurtransferase, riken structural gen 99.32
3tp9_A474 Beta-lactamase and rhodanese domain protein; struc 99.31
2eg4_A230 Probable thiosulfate sulfurtransferase; structural 99.29
2wlr_A423 Putative thiosulfate sulfurtransferase YNJE; rhoda 99.26
3utn_X327 Thiosulfate sulfurtransferase TUM1; rhodanese-like 99.26
1okg_A 373 Possible 3-mercaptopyruvate sulfurtransferase; rho 99.24
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 99.24
1yt8_A 539 Thiosulfate sulfurtransferase; rhodanase domains, 99.23
2wlr_A 423 Putative thiosulfate sulfurtransferase YNJE; rhoda 99.22
2eg4_A 230 Probable thiosulfate sulfurtransferase; structural 99.18
1okg_A 373 Possible 3-mercaptopyruvate sulfurtransferase; rho 99.18
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 99.16
3r2u_A466 Metallo-beta-lactamase family protein; structural 99.1
3r2u_A 466 Metallo-beta-lactamase family protein; structural 98.75
3utn_X 327 Thiosulfate sulfurtransferase TUM1; rhodanese-like 98.75
2f46_A156 Hypothetical protein; structural genomics, joint c 98.09
4erc_A150 Dual specificity protein phosphatase 23; alpha bet 95.26
2img_A151 Dual specificity protein phosphatase 23; DUSP23, V 94.55
1v8c_A168 MOAD related protein; riken structural genomics/pr 94.33
1fpz_A212 Cyclin-dependent kinase inhibitor 3; alpha-beta sa 92.14
1xri_A151 AT1G05000; structural genomics, protein structure 91.52
3ezz_A144 Dual specificity protein phosphatase 4; alpha/beta 90.78
2nt2_A145 Protein phosphatase slingshot homolog 2; alpha/bet 87.92
1ywf_A 296 Phosphotyrosine protein phosphatase PTPB; four str 87.36
1yz4_A160 DUSP15, dual specificity phosphatase-like 15 isofo 87.22
3s4o_A167 Protein tyrosine phosphatase-like protein; structu 86.23
2hcm_A164 Dual specificity protein phosphatase; structural g 85.2
3rgo_A157 Protein-tyrosine phosphatase mitochondrial 1; phos 84.99
2r0b_A154 Serine/threonine/tyrosine-interacting protein; str 84.23
3s4e_A144 Dual specificity protein phosphatase 19; PTP, prot 84.15
3f81_A183 Dual specificity protein phosphatase 3; hydrolase, 84.05
3rz2_A189 Protein tyrosine phosphatase type IVA 1; tyrosine 83.64
1wrm_A165 Dual specificity phosphatase 22; DSP, JNK, hydrola 83.51
2wgp_A190 Dual specificity protein phosphatase 14; MKP6, DUS 82.43
2esb_A188 Dual specificity protein phosphatase 18; alpha/bet 80.5
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A Back     alignment and structure
Probab=99.74  E-value=1.8e-18  Score=117.40  Aligned_cols=63  Identities=22%  Similarity=0.232  Sum_probs=54.0

Q ss_pred             cccCHHHHHHHHhCC--CeEEEeCChHHHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHhhccCCCCeEEEEcCCC
Q 032117           73 TSVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI  147 (147)
Q Consensus        73 ~~Is~~el~~~~~~~--~~lIDVR~~~e~~~ghIpGAinip~~~~~~~~~~~~~~~l~~~~~~l~~d~~IVvyC~s~  147 (147)
                      +.||++|+++++.++  .+|||||++.||+.||||||+|||+.            .+.+....++++++||+||++|
T Consensus         2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G   66 (103)
T 3iwh_A            2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGG   66 (103)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSS
T ss_pred             CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCC
Confidence            579999999988653  78999999999999999999999996            2333445689999999999986
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Back     alignment and structure
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp} Back     alignment and structure
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1} Back     alignment and structure
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Back     alignment and structure
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Back     alignment and structure
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} Back     alignment and structure
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Back     alignment and structure
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Back     alignment and structure
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Back     alignment and structure
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3 Back     alignment and structure
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris} Back     alignment and structure
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Back     alignment and structure
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile} Back     alignment and structure
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A Back     alignment and structure
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} Back     alignment and structure
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Back     alignment and structure
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Back     alignment and structure
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis} Back     alignment and structure
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Back     alignment and structure
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Back     alignment and structure
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Back     alignment and structure
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Back     alignment and structure
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Back     alignment and structure
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Back     alignment and structure
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Back     alignment and structure
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Back     alignment and structure
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Back     alignment and structure
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A Back     alignment and structure
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens} Back     alignment and structure
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A Back     alignment and structure
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens} Back     alignment and structure
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A Back     alignment and structure
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Back     alignment and structure
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Back     alignment and structure
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Back     alignment and structure
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Back     alignment and structure
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Back     alignment and structure
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Back     alignment and structure
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp} Back     alignment and structure
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Back     alignment and structure
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Back     alignment and structure
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Back     alignment and structure
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Back     alignment and structure
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Back     alignment and structure
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Back     alignment and structure
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Back     alignment and structure
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Back     alignment and structure
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Back     alignment and structure
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Back     alignment and structure
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Back     alignment and structure
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A Back     alignment and structure
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Back     alignment and structure
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1 Back     alignment and structure
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Back     alignment and structure
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Back     alignment and structure
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A Back     alignment and structure
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Back     alignment and structure
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* Back     alignment and structure
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Back     alignment and structure
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Back     alignment and structure
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Back     alignment and structure
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Back     alignment and structure
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Back     alignment and structure
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} Back     alignment and structure
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* Back     alignment and structure
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Back     alignment and structure
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Back     alignment and structure
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} Back     alignment and structure
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 147
d1tq1a_119 c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc 7e-21
d1hzma_154 c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat 9e-05
d1c25a_161 c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9e-04
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.9 bits (196), Expect = 7e-21
 Identities = 52/76 (68%), Positives = 59/76 (77%)

Query: 67  EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKF 126
           E   VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM R  SGM+KN  F
Sbjct: 2   EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDF 61

Query: 127 VEEVSTRFRKHDEIIV 142
           +E+VS+ F + D IIV
Sbjct: 62  LEQVSSHFGQSDNIIV 77
>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154 Back     information, alignment and structure
>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query147
d1tq1a_119 Thiosulfate sulfurtransferase/Senescence-associate 99.74
d1gmxa_108 Sulfurtransferase GlpE {Escherichia coli [TaxId: 5 99.68
d1e0ca2136 Sulfurtransferase {Azotobacter vinelandii [TaxId: 99.62
d1yt8a1136 Thiosulfate sulfurtransferase PA2603 {Pseudomonas 99.6
d1rhsa2144 Rhodanese {Cow (Bos taurus) [TaxId: 9913]} 99.6
d1yt8a3157 Thiosulfate sulfurtransferase PA2603 {Pseudomonas 99.58
d1yt8a4130 Thiosulfate sulfurtransferase PA2603 {Pseudomonas 99.55
d1urha2120 3-mercaptopyruvate sulfurtransferase {Escherichia 99.55
d1uara2141 Sulfurtransferase {Thermus thermophilus [TaxId: 27 99.53
d1yt8a2101 Thiosulfate sulfurtransferase PA2603 {Pseudomonas 99.51
d1t3ka_132 Dual specificity phosphatase Cdc25 {Thale cress (A 99.48
d1uara1143 Sulfurtransferase {Thermus thermophilus [TaxId: 27 99.46
d2gwfa1135 Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum 99.43
d1qxna_137 Polysulfide-sulfur transferase (sulfide dehydrogen 99.42
d1urha1147 3-mercaptopyruvate sulfurtransferase {Escherichia 99.42
d1e0ca1135 Sulfurtransferase {Azotobacter vinelandii [TaxId: 99.35
d1rhsa1149 Rhodanese {Cow (Bos taurus) [TaxId: 9913]} 99.33
d1c25a_161 CDC25a {Human (Homo sapiens) [TaxId: 9606]} 99.3
d1okga2139 3-mercaptopyruvate sulfurtransferase {Leishmania m 99.3
d1okga1156 3-mercaptopyruvate sulfurtransferase {Leishmania m 99.26
d1ymka1174 CDC25b {Human (Homo sapiens) [TaxId: 9606]} 99.25
d1hzma_154 Erk2 binding domain of Mapk phosphatase mkp-3 {Hum 99.23
d1xria_151 Putative phosphatase At1g05000 {Thale cress (Arabi 93.36
d1fpza_176 Kinase associated phosphatase (kap) {Human (Homo s 91.72
d1ywfa1 272 Phosphotyrosine protein phosphatase PtpB {Mycobact 85.18
d1m3ga_145 Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax 81.85
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=1.9e-18  Score=118.06  Aligned_cols=78  Identities=65%  Similarity=0.966  Sum_probs=67.2

Q ss_pred             CCCcccCHHHHHHHHhCCCeEEEeCChHHHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHhhccCCCCeEEEEcCCC
Q 032117           70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVVSPCI  147 (147)
Q Consensus        70 ~~~~~Is~~el~~~~~~~~~lIDVR~~~e~~~ghIpGAinip~~~~~~~~~~~~~~~l~~~~~~l~~d~~IVvyC~s~  147 (147)
                      ..+..|+++++.+++++|.+|||||++.||..||||||+|+|+...........++++.++...++++++||+||++|
T Consensus         5 ~~p~~i~~~~a~~l~~~g~~liDvR~~~e~~~ghi~ga~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~C~~G   82 (119)
T d1tq1a_           5 RVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSG   82 (119)
T ss_dssp             CCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSC
T ss_pred             cCCCccCHHHHHHHHHCcCEEEECCCHHHHHcCCCCCccchhhcccccccccccHHHHHHHHHhcCCCcEEEEEcCCc
Confidence            446689999999999989999999999999999999999999975444555566678888877789999999999986
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Back     information, alignment and structure