Citrus Sinensis ID: 032136

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
MMLQANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSNDS
cEEEccccccccHHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHccccccccHHHHHHHHHcccEEEEccccccHHHHHHcHHHHHcccccEEEEEccccccccHHHHHHHHHcccccccccHHHHHHHHHHcccccccccc
cccHcccccHHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHccccccccHHHHHHHHHHccEEEEEcccccHHHHHcccHHHHHHHHcEEEEEccccccccHHHHHHHHHccccEEEEccHHHHHHHHHcccccccccc
mmlqanqsgyqRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSdllesfaipgfwmpeQVWTICRNFGVICIRREGQDVEKIIsdneildknkgniklvdelvpnqisstrirDCICrglsikyltedKVIDYIRESRLYLNSNDS
mmlqanqsgyqrTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGqdvekiisdneildknkgniklvdelvpnqisstrirdcicrglsikyltedkvidyiresrlylnsnds
MMLQANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSNDS
*********YQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL*****
MMLQANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVE*IISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRE***YL*****
**********QRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSNDS
******QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMLQANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSNDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query146 2.2.26 [Sep-21-2011]
Q9HAN9279 Nicotinamide mononucleoti yes no 0.719 0.376 0.476 5e-24
Q9EPA7285 Nicotinamide mononucleoti yes no 0.719 0.368 0.485 7e-24
Q0VD50281 Nicotinamide mononucleoti yes no 0.719 0.373 0.466 1e-22
Q99JR6245 Nicotinamide mononucleoti no no 0.732 0.436 0.411 1e-20
P53204395 Nicotinamide-nucleotide a yes no 0.958 0.354 0.356 5e-19
Q96T66252 Nicotinamide mononucleoti no no 0.938 0.543 0.326 8e-19
Q06178401 Nicotinamide-nucleotide a no no 0.958 0.349 0.335 2e-18
Q6PC93304 Nicotinamide mononucleoti no no 0.746 0.358 0.391 1e-16
Q9BZQ4307 Nicotinamide mononucleoti no no 0.746 0.355 0.382 3e-15
Q0HA29307 Nicotinamide mononucleoti no no 0.746 0.355 0.382 3e-15
>sp|Q9HAN9|NMNA1_HUMAN Nicotinamide mononucleotide adenylyltransferase 1 OS=Homo sapiens GN=NMNAT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 72/105 (68%)

Query: 36  KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGN 95
           KV L+CG+DLLESFA+P  W  E +  I  N+G+IC+ R G D +K I ++++L K++ N
Sbjct: 150 KVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSN 209

Query: 96  IKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 140
           I +V+E + N ISST+IR  + RG SI+YL  D V +YI +  LY
Sbjct: 210 IHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLY 254
Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate with the same efficiency. Can use triazofurin monophosphate (TrMP) as substrate. Also catalyzes the reverse reaction, i.e. the pyrophosphorolytic cleavage of NAD(+). For the pyrophosphorolytic activity, prefers NAD(+) and NAAD as substrates and degrades NADH, nicotinic acid adenine dinucleotide phosphate (NHD) and nicotinamide guanine dinucleotide (NGD) less effectively. Fails to cleave phosphorylated dinucleotides NADP(+), NADPH and NAADP(+). Protects against axonal degeneration following mechanical or toxic insults.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 1EC: 8
>sp|Q9EPA7|NMNA1_MOUSE Nicotinamide mononucleotide adenylyltransferase 1 OS=Mus musculus GN=Nmnat1 PE=1 SV=2 Back     alignment and function description
>sp|Q0VD50|NMNA1_BOVIN Nicotinamide mononucleotide adenylyltransferase 1 OS=Bos taurus GN=NMNAT1 PE=2 SV=1 Back     alignment and function description
>sp|Q99JR6|NMNA3_MOUSE Nicotinamide mononucleotide adenylyltransferase 3 OS=Mus musculus GN=Nmnat3 PE=2 SV=1 Back     alignment and function description
>sp|P53204|NMA2_YEAST Nicotinamide-nucleotide adenylyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMA2 PE=1 SV=1 Back     alignment and function description
>sp|Q96T66|NMNA3_HUMAN Nicotinamide mononucleotide adenylyltransferase 3 OS=Homo sapiens GN=NMNAT3 PE=1 SV=2 Back     alignment and function description
>sp|Q06178|NMA1_YEAST Nicotinamide-nucleotide adenylyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMA1 PE=1 SV=1 Back     alignment and function description
>sp|Q6PC93|NMNA2_DANRE Nicotinamide mononucleotide adenylyltransferase 2 OS=Danio rerio GN=nmnat2 PE=2 SV=1 Back     alignment and function description
>sp|Q9BZQ4|NMNA2_HUMAN Nicotinamide mononucleotide adenylyltransferase 2 OS=Homo sapiens GN=NMNAT2 PE=1 SV=1 Back     alignment and function description
>sp|Q0HA29|NMNA2_RAT Nicotinamide mononucleotide adenylyltransferase 2 OS=Rattus norvegicus GN=Nmnat2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query146
357495089 251 Nicotinamide mononucleotide adenylyltran 0.972 0.565 0.725 3e-55
356552585245 PREDICTED: nicotinamide mononucleotide a 0.952 0.567 0.733 2e-54
356563422245 PREDICTED: nicotinamide mononucleotide a 0.952 0.567 0.733 2e-54
356570212194 PREDICTED: nicotinamide mononucleotide a 0.952 0.716 0.733 3e-54
359494376 254 PREDICTED: nicotinamide mononucleotide a 0.972 0.559 0.732 4e-54
296089926 249 unnamed protein product [Vitis vinifera] 0.972 0.570 0.732 4e-54
255563474242 nicotinamide mononucleotide adenylyltran 0.938 0.566 0.712 2e-51
357455741236 Nicotinamide mononucleotide adenylyltran 0.972 0.601 0.694 2e-51
224123176239 predicted protein [Populus trichocarpa] 0.952 0.581 0.690 6e-51
297796461238 hypothetical protein ARALYDRAFT_495663 [ 0.938 0.575 0.686 2e-49
>gi|357495089|ref|XP_003617833.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] gi|355519168|gb|AET00792.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  219 bits (558), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 103/142 (72%), Positives = 124/142 (87%)

Query: 4   QANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTI 63
           +ANQ+ YQRTLTVLSRV   + E GLIS ESLKVMLVCGSDLL SF IPGFW+P+QV +I
Sbjct: 109 EANQNTYQRTLTVLSRVHASICETGLISRESLKVMLVCGSDLLHSFGIPGFWIPDQVKSI 168

Query: 64  CRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIK 123
           CR++GV+CIRREGQ++EK ISD+ IL++N+ NI++VDELVPNQISSTRIR+CI RGLSIK
Sbjct: 169 CRDYGVVCIRREGQNIEKTISDDNILNENQANIEVVDELVPNQISSTRIRECIARGLSIK 228

Query: 124 YLTEDKVIDYIRESRLYLNSND 145
           YLT D+VIDY RE +LYL S+D
Sbjct: 229 YLTADEVIDYTREHKLYLKSDD 250

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356552585|ref|XP_003544646.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356563422|ref|XP_003549962.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356570212|ref|XP_003553284.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|359494376|ref|XP_002268571.2| PREDICTED: nicotinamide mononucleotide adenylyltransferase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296089926|emb|CBI39745.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563474|ref|XP_002522739.1| nicotinamide mononucleotide adenylyltransferase, putative [Ricinus communis] gi|223537977|gb|EEF39590.1| nicotinamide mononucleotide adenylyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357455741|ref|XP_003598151.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] gi|355487199|gb|AES68402.1| Nicotinamide mononucleotide adenylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224123176|ref|XP_002319013.1| predicted protein [Populus trichocarpa] gi|222857389|gb|EEE94936.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297796461|ref|XP_002866115.1| hypothetical protein ARALYDRAFT_495663 [Arabidopsis lyrata subsp. lyrata] gi|297311950|gb|EFH42374.1| hypothetical protein ARALYDRAFT_495663 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query146
FB|FBgn0039254 389 Nmnat "Nicotinamide mononucleo 0.753 0.282 0.445 1e-23
UNIPROTKB|Q9HAN9279 NMNAT1 "Nicotinamide mononucle 0.753 0.394 0.454 1.4e-23
UNIPROTKB|F1RIG0243 F1RIG0 "Uncharacterized protei 0.753 0.452 0.463 4.8e-23
UNIPROTKB|I3LKJ4267 I3LKJ4 "Uncharacterized protei 0.753 0.411 0.463 4.8e-23
RGD|1310996285 Nmnat1 "nicotinamide nucleotid 0.732 0.375 0.481 6.1e-23
UNIPROTKB|D4AAS6285 Nmnat1 "Protein Nmnat1" [Rattu 0.732 0.375 0.481 6.1e-23
UNIPROTKB|E9PSK8285 Nmnat1 "Protein Nmnat1" [Rattu 0.732 0.375 0.481 6.1e-23
UNIPROTKB|Q0VD50281 NMNAT1 "Nicotinamide mononucle 0.753 0.391 0.445 2.1e-22
UNIPROTKB|F1NH63229 F1NH63 "Uncharacterized protei 0.719 0.458 0.485 4.3e-22
UNIPROTKB|J9P111279 NMNAT1 "Uncharacterized protei 0.719 0.376 0.457 1.5e-21
FB|FBgn0039254 Nmnat "Nicotinamide mononucleotide adenylyltransferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 255 (94.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 49/110 (44%), Positives = 72/110 (65%)

Query:    31 STESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILD 90
             S + + + L+CG+DLLESFA+PG W    +  I  N G++ I R G +  K I D++IL 
Sbjct:   173 SRDPVHLKLLCGADLLESFAVPGLWAEADIEDIVANHGLVVITRAGSNPGKFIFDSDILT 232

Query:    91 KNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 140
             K + NI L+   VPN++SST IR  + RG S+KYL +D V++YI+  RL+
Sbjct:   233 KYQSNITLITNWVPNEVSSTLIRRLLGRGQSVKYLLDDLVLEYIKRQRLF 282
GO:0009435 "NAD biosynthetic process" evidence=IEA
GO:0000309 "nicotinamide-nucleotide adenylyltransferase activity" evidence=IDA
GO:0045494 "photoreceptor cell maintenance" evidence=IMP
GO:0097062 "dendritic spine maintenance" evidence=IMP
UNIPROTKB|Q9HAN9 NMNAT1 "Nicotinamide mononucleotide adenylyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RIG0 F1RIG0 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LKJ4 I3LKJ4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1310996 Nmnat1 "nicotinamide nucleotide adenylyltransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|D4AAS6 Nmnat1 "Protein Nmnat1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PSK8 Nmnat1 "Protein Nmnat1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VD50 NMNAT1 "Nicotinamide mononucleotide adenylyltransferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH63 F1NH63 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|J9P111 NMNAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033380001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (157 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query146
PLN02945236 PLN02945, PLN02945, nicotinamide-nucleotide adenyl 1e-81
cd09286225 cd09286, NMNAT_Eukarya, Nicotinamide/nicotinate mo 2e-52
TIGR00482193 TIGR00482, TIGR00482, nicotinate (nicotinamide) nu 3e-17
COG1057197 COG1057, NadD, Nicotinic acid mononucleotide adeny 1e-11
cd02165192 cd02165, NMNAT, Nicotinamide/nicotinate mononucleo 2e-10
PRK00071203 PRK00071, nadD, nicotinic acid mononucleotide aden 2e-10
pfam01467148 pfam01467, CTP_transf_2, Cytidylyltransferase 1e-04
PRK07152 342 PRK07152, nadD, putative nicotinate-nucleotide ade 2e-04
>gnl|CDD|178531 PLN02945, PLN02945, nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information 
 Score =  239 bits (613), Expect = 1e-81
 Identities = 93/137 (67%), Positives = 117/137 (85%)

Query: 4   QANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTI 63
           +A QS YQRTLTVL+RV+  L   GL S ES++VML+CGSDLLESF+ PG W+P+QV TI
Sbjct: 99  EARQSTYQRTLTVLARVETSLNNNGLASEESVRVMLLCGSDLLESFSTPGVWIPDQVRTI 158

Query: 64  CRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIK 123
           CR++GV+CIRREGQDVEK++S +EIL++N+GNI +VD+LVPN ISSTR+R+CI RGLS+K
Sbjct: 159 CRDYGVVCIRREGQDVEKLVSQDEILNENRGNILVVDDLVPNSISSTRVRECISRGLSVK 218

Query: 124 YLTEDKVIDYIRESRLY 140
           YLT D VIDYI+E  LY
Sbjct: 219 YLTPDGVIDYIKEHGLY 235

Length = 236
>gnl|CDD|185681 cd09286, NMNAT_Eukarya, Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>gnl|CDD|232994 TIGR00482, TIGR00482, nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information
>gnl|CDD|223985 COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|185680 cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>gnl|CDD|234611 PRK00071, nadD, nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|216517 pfam01467, CTP_transf_2, Cytidylyltransferase Back     alignment and domain information
>gnl|CDD|235947 PRK07152, nadD, putative nicotinate-nucleotide adenylyltransferase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 146
TIGR00482193 nicotinate (nicotinamide) nucleotide adenylyltrans 100.0
PRK00071203 nadD nicotinic acid mononucleotide adenylyltransfe 100.0
PRK06973243 nicotinic acid mononucleotide adenylyltransferase; 100.0
PLN02945236 nicotinamide-nucleotide adenylyltransferase/nicoti 100.0
cd09286225 NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti 100.0
COG1057197 NadD Nicotinic acid mononucleotide adenylyltransfe 100.0
cd02165192 NMNAT Nicotinamide/nicotinate mononucleotide adeny 99.98
PRK07152 342 nadD putative nicotinate-nucleotide adenylyltransf 99.97
PRK08887174 nicotinic acid mononucleotide adenylyltransferase; 99.96
KOG3199234 consensus Nicotinamide mononucleotide adenylyl tra 99.93
cd02163153 PPAT Phosphopantetheine adenylyltransferase. Phosp 99.53
TIGR01510155 coaD_prev_kdtB pantetheine-phosphate adenylyltrans 99.53
PRK00168159 coaD phosphopantetheine adenylyltransferase; Provi 99.43
PF01467157 CTP_transf_2: Cytidylyltransferase; InterPro: IPR0 99.31
cd02166163 NMNAT_Archaea Nicotinamide/nicotinate mononucleoti 98.27
TIGR01527165 arch_NMN_Atrans nicotinamide-nucleotide adenylyltr 98.25
cd02168181 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide 98.25
PRK01153174 nicotinamide-nucleotide adenylyltransferase; Provi 97.91
cd02039143 cytidylyltransferase_like Cytidylyltransferase-lik 97.91
TIGR00339383 sopT ATP sulphurylase. Members of this family also 97.78
PRK13793196 nicotinamide-nucleotide adenylyltransferase; Provi 97.5
PRK05379 340 bifunctional nicotinamide mononucleotide adenylylt 96.8
cd02169297 Citrate_lyase_ligase Citrate lyase ligase. Citrate 96.57
COG0669159 CoaD Phosphopantetheine adenylyltransferase [Coenz 96.4
cd02170136 cytidylyltransferase cytidylyltransferase. The cyt 96.11
smart00764182 Citrate_ly_lig Citrate lyase ligase C-terminal dom 95.96
PF08218182 Citrate_ly_lig: Citrate lyase ligase C-terminal do 94.54
TIGR00124332 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP 93.98
COG3053352 CitC Citrate lyase synthetase [Energy production a 91.89
PF01747215 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002 90.15
PRK13660182 hypothetical protein; Provisional 88.49
PRK13670 388 hypothetical protein; Provisional 87.93
cd02064180 FAD_synthetase_N FAD synthetase, N-terminal domain 87.75
PRK15364196 pathogenicity island 2 effector protein SseB; Prov 86.81
PRK07143279 hypothetical protein; Provisional 86.8
cd00517353 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also 84.2
TIGR00083 288 ribF riboflavin kinase/FMN adenylyltransferase. mu 83.92
COG1056172 NadR Nicotinamide mononucleotide adenylyltransfera 82.73
PRK04149391 sat sulfate adenylyltransferase; Reviewed 82.16
TIGR02199144 rfaE_dom_II rfaE bifunctional protein, domain II. 80.31
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-36  Score=226.43  Aligned_cols=125  Identities=30%  Similarity=0.493  Sum_probs=105.5

Q ss_pred             cccccCCCccchHHHHHHHHHHhhhcccCcCCCceEEEEeehhhhhhCCCCCCCchhHHHhhhcceeEEEEecCCCChhh
Q 032136            2 MLQANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEK   81 (146)
Q Consensus         2 d~E~~~~~~syT~~tL~~l~~~~~~~~~~~~~~~~~~fiiG~D~l~~l~~w~~W~~~~~~~l~~~~~~iV~~R~g~~~~~   81 (146)
                      ++|+++++++||++||++|+++||+        .+|+||||+|+|.+|++   |+++  ++|++.|+|+|++|+|++...
T Consensus        69 ~~E~~~~~~syT~~tl~~l~~~~p~--------~~~~~iiG~D~l~~l~~---W~~~--~~i~~~~~~iv~~R~g~~~~~  135 (193)
T TIGR00482        69 DFEIKRGGPSYTIDTLKHLKKKYPD--------VELYFIIGADALRSFPL---WKDW--QELLELVHLVIVPRPGYTLDK  135 (193)
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHCCC--------CeEEEEEcHHHhhhhcc---ccCH--HHHHHhCcEEEEeCCCCCcch
Confidence            6899999999999999999999998        89999999999999995   5554  999999999999999976432


Q ss_pred             hccchHHhhhcCCCeEEEecCCCceeeHHHHHHHHHcCCCCCccChHHHHHHHHhcCCC
Q 032136           82 IISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY  140 (146)
Q Consensus        82 ~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~YI~~~~LY  140 (146)
                      .............++.+++ .+..+||||+||+++++|++++++||++|++||++|+||
T Consensus       136 ~~~~~~~~~~~~~~i~~~~-~~~~~iSST~IR~~l~~g~~~~~lvP~~V~~YI~~~~LY  193 (193)
T TIGR00482       136 ALLEKAILRMHHGNLTLLH-NPRVPISSTEIRQRIRQGKSIEYLLPDPVIKYIKQHGLY  193 (193)
T ss_pred             hhhHHHHhcccCCcEEEEc-CCccccCHHHHHHHHHcCCCchhhCCHHHHHHHHHhCCC
Confidence            1000000001234688885 778999999999999999999999999999999999999

This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase Back     alignment and domain information
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic Back     alignment and domain information
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase Back     alignment and domain information
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated Back     alignment and domain information
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional Back     alignment and domain information
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism] Back     alignment and domain information
>cd02163 PPAT Phosphopantetheine adenylyltransferase Back     alignment and domain information
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial Back     alignment and domain information
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional Back     alignment and domain information
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT) Back     alignment and domain information
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal Back     alignment and domain information
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase Back     alignment and domain information
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain Back     alignment and domain information
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain Back     alignment and domain information
>TIGR00339 sopT ATP sulphurylase Back     alignment and domain information
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional Back     alignment and domain information
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional Back     alignment and domain information
>cd02169 Citrate_lyase_ligase Citrate lyase ligase Back     alignment and domain information
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02170 cytidylyltransferase cytidylyltransferase Back     alignment and domain information
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain Back     alignment and domain information
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6 Back     alignment and domain information
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase Back     alignment and domain information
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion] Back     alignment and domain information
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2 Back     alignment and domain information
>PRK13660 hypothetical protein; Provisional Back     alignment and domain information
>PRK13670 hypothetical protein; Provisional Back     alignment and domain information
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme Back     alignment and domain information
>PRK15364 pathogenicity island 2 effector protein SseB; Provisional Back     alignment and domain information
>PRK07143 hypothetical protein; Provisional Back     alignment and domain information
>cd00517 ATPS ATP-sulfurylase Back     alignment and domain information
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase Back     alignment and domain information
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK04149 sat sulfate adenylyltransferase; Reviewed Back     alignment and domain information
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query146
1kqn_A279 Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE CO 5e-25
1gzu_A290 Crystal Structure Of Human Nicotinamide Mononucleot 5e-25
1kku_A279 Crystal Structure Of Nuclear Human Nicotinamide Mon 9e-25
1nup_A252 Crystal Structure Of Human Cytosolic NmnNAMN ADENYL 5e-19
1yum_A242 Crystal Structure Of Nicotinic Acid Mononucleotide 3e-04
1yul_A242 Crystal Structure Of Nicotinic Acid Mononucleotide 4e-04
>pdb|1KQN|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED With Nad Length = 279 Back     alignment and structure 
Iteration: 1

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 72/105 (68%)
Query: 36  KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGN 95
           KV L+CG+DLLESFA+P  W  E +  I  N+G+IC+ R G D +K I ++++L K++ N
Sbjct: 150 KVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSN 209
Query: 96  IKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 140
           I +V+E + N ISST+IR  + RG SI+YL  D V +YI +  LY
Sbjct: 210 IHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLY 254
>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide Adenylyltransferase In Complex With Nmn Length = 290 Back     alignment and structure
>pdb|1KKU|A Chain A, Crystal Structure Of Nuclear Human Nicotinamide Mononucleotide Adenylyltransferase Length = 279 Back     alignment and structure
>pdb|1NUP|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN ADENYLYLTRANSFERASE Complex With Nmn Length = 252 Back     alignment and structure
>pdb|1YUM|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide Adenylyltransferase From Pseudomonas Aeruginosa Length = 242 Back     alignment and structure
>pdb|1YUL|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide Adenylyltransferase From Pseudomonas Aeruginosa Length = 242 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query146
1nup_A252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 9e-40
1kqn_A279 Nmnat, nicotinamide mononucleotide adenylyl transf 4e-34
1yum_A242 'probable nicotinate-nucleotide adenylyltransferas 3e-13
1k4m_A213 NAMN adenylyltransferase; nucleotidyltransferase; 7e-12
1kam_A194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 9e-12
2qtr_A189 Nicotinate (nicotinamide) nucleotide adenylyltran; 1e-11
2h29_A189 Probable nicotinate-nucleotide adenylyltransferase 6e-11
3h05_A177 Uncharacterized protein VPA0413; nucleotidylyl, tr 4e-09
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Length = 252 Back     alignment and structure
 Score =  133 bits (335), Expect = 9e-40
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 5   ANQSGYQRTLTVLSRVKNFLIEAGLISTES-------------LKVMLVCGSDLLESFAI 51
           + Q+ +  T+ VL    + L+ +                     ++ L+CG+D+L++F  
Sbjct: 85  SEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQT 144

Query: 52  PGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTR 111
           P  W    +  I   FG++C+ R   D +  I+++ IL  ++ NI L  E V N+IS+T 
Sbjct: 145 PNLWKDAHIQEIVEKFGLVCVGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATY 204

Query: 112 IRDCICRGLSIKYLTEDKVIDYIRESRLYLNSNDS 146
           IR  + +G S+KYL  D VI YI++  LY   +  
Sbjct: 205 IRRALGQGQSVKYLIPDAVITYIKDHGLYTKGSTW 239
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Length = 279 Back     alignment and structure
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Length = 242 Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Length = 213 Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Length = 194 Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Length = 189 Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Length = 189 Back     alignment and structure
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Length = 177 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query146
1kqn_A279 Nmnat, nicotinamide mononucleotide adenylyl transf 100.0
1nup_A252 FKSG76; NAD biosynthesis, mitochondria, pyridine a 100.0
1yum_A242 'probable nicotinate-nucleotide adenylyltransferas 99.97
3h05_A177 Uncharacterized protein VPA0413; nucleotidylyl, tr 99.97
1k4m_A213 NAMN adenylyltransferase; nucleotidyltransferase; 99.97
2h29_A189 Probable nicotinate-nucleotide adenylyltransferase 99.96
1kam_A194 Deamido-NAD(+), nicotinate-nucleotide adenylyltran 99.96
2qtr_A189 Nicotinate (nicotinamide) nucleotide adenylyltran; 99.95
1v47_A349 ATP sulfurylase; product binding complex, zinc, ri 99.53
1jhd_A396 Sulfate adenylyltransferase; sulfurylase, APS, che 99.5
1ej2_A181 Nicotinamide mononucleotide adenylyltransferase; d 99.48
3nd5_A171 Phosphopantetheine adenylyltransferase; PPAT, coen 99.48
1o6b_A169 Phosphopantetheine adenylyltransferase; structural 99.42
3f3m_A168 Phosphopantetheine adenylyltransferase; PPAT, coen 99.37
1f9a_A168 Hypothetical protein MJ0541; alpha/beta, transfera 99.33
1vlh_A173 Phosphopantetheine adenylyltransferase; TM0741, st 99.31
1qjc_A158 Phosphopantetheine adenylyltransferase; coenzyme A 99.23
1od6_A160 PPAT, phosphopantetheine adenylyltransferase; coen 99.23
2qjo_A 341 Bifunctional NMN adenylyltransferase/nudix hydrol; 99.13
4f3r_A162 Phosphopantetheine adenylyltransferase; phosphopan 98.62
3k9w_A187 Phosphopantetheine adenylyltransferase; niaid, ssg 98.38
3nbk_A177 Phosphopantetheine adenylyltransferase; PPAT, PHP; 98.35
2qjt_B 352 Nicotinamide-nucleotide adenylyltransferase; two i 98.26
3nv7_A157 Phosphopantetheine adenylyltransferase; helicobact 97.75
1r6x_A395 ATP:sulfate adenylyltransferase; APS kinase-like d 97.35
2b7l_A132 Glycerol-3-phosphate cytidylyltransferase; rossman 97.2
1coz_A129 Protein (glycerol-3-phosphate cytidylyltransferase 97.09
1g8f_A 511 Sulfate adenylyltransferase; alpha-beta protein, b 97.03
3gmi_A357 UPF0348 protein MJ0951; protein with unknown funct 96.0
1mrz_A 293 Riboflavin kinase/FMN adenylyltransferase; rossman 86.92
3op1_A 308 Macrolide-efflux protein; structural genomics, PSI 83.04
2x0k_A 338 Riboflavin biosynthesis protein RIBF; riboflavin k 80.27
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A* Back     alignment and structure
Probab=100.00  E-value=3.2e-35  Score=229.03  Aligned_cols=142  Identities=39%  Similarity=0.686  Sum_probs=115.0

Q ss_pred             CcccccCCCccchHHHHHHHHHHhhhcc------------------c----------C----cCCCceEEEEeehhhhhh
Q 032136            1 MMLQANQSGYQRTLTVLSRVKNFLIEAG------------------L----------I----STESLKVMLVCGSDLLES   48 (146)
Q Consensus         1 ~d~E~~~~~~syT~~tL~~l~~~~~~~~------------------~----------~----~~~~~~~~fiiG~D~l~~   48 (146)
                      .+||+.+++++||++||++|+++|...+                  |          .    |+.+.+++||||+|+|.+
T Consensus        83 ~~~E~~~~~~syTidtL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~GaD~l~~  162 (279)
T 1kqn_A           83 DTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLES  162 (279)
T ss_dssp             CCTGGGCSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHHHH
T ss_pred             eccccccCCCCcHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccCCCCCccEEEEEehhhHhh
Confidence            3799999999999999999999992000                  0          0    111268999999999999


Q ss_pred             CCCCCCCchhHHHhhhcceeEEEEecCCCChhhhccchHHhhhcCCCeEEEecCCCceeeHHHHHHHHHcCCCCCccChH
Q 032136           49 FAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTED  128 (146)
Q Consensus        49 l~~w~~W~~~~~~~l~~~~~~iV~~R~g~~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~  128 (146)
                      |++|++|++++.++|++.|+|||+.|+|+...........+.++.++|.+++....++||||+||+++++|+++++|||+
T Consensus       163 ~~~p~~W~~~~~e~il~~~~lvv~~R~g~~~~~~~~~~~~l~~~~~~i~~v~~~~~~~ISST~IR~~l~~g~si~~lvP~  242 (279)
T 1kqn_A          163 FAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPD  242 (279)
T ss_dssp             TTSTTTSCHHHHHHHHHHTCEEEEESCHHHHHHHHHTCHHHHHTGGGEEEEECCSCCCCCHHHHHHHHHTTCCCBTTBCH
T ss_pred             CcCccccCcchHHHHHhhCcEEEEeCCCCChHhhhhhHHHHhhcCCcEEEECCCCCCccCHHHHHHHHHcCCChhhcCCH
Confidence            99999999854589999999999999997654332223345556678999963335899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCC
Q 032136          129 KVIDYIRESRLYLN  142 (146)
Q Consensus       129 ~V~~YI~~~~LY~~  142 (146)
                      +|++||++|+||..
T Consensus       243 ~V~~YI~~~~LY~~  256 (279)
T 1kqn_A          243 LVQEYIEKHNLYSS  256 (279)
T ss_dssp             HHHHHHHHHTCCSH
T ss_pred             HHHHHHHHcCCcCC
Confidence            99999999999963
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A* Back     alignment and structure
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A* Back     alignment and structure
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus} Back     alignment and structure
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A* Back     alignment and structure
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A* Back     alignment and structure
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A* Back     alignment and structure
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A* Back     alignment and structure
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A* Back     alignment and structure
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A* Back     alignment and structure
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3 Back     alignment and structure
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0 Back     alignment and structure
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3 Back     alignment and structure
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3 Back     alignment and structure
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A Back     alignment and structure
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3 Back     alignment and structure
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP} Back     alignment and structure
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii} Back     alignment and structure
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A* Back     alignment and structure
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A* Back     alignment and structure
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B Back     alignment and structure
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A* Back     alignment and structure
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 Back     alignment and structure
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus} Back     alignment and structure
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A* Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii} Back     alignment and structure
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Back     alignment and structure
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Back     alignment and structure
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 146
d1kr2a_271 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 2e-31
d1nuua_233 c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransfera 2e-23
d1k4ma_213 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 8e-11
d1kama_189 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 1e-08
d1f9aa_164 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 8e-05
d1ej2a_167 c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad 8e-05
d1qjca_157 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 9e-05
d1tfua_157 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 1e-04
d1o6ba_163 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 2e-04
d1vlha_157 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 2e-04
d1jhda2223 c.26.1.5 (A:174-396) ATP sulfurylase catalytic dom 5e-04
d1od6a_160 c.26.1.3 (A:) Phosphopantetheine adenylyltransfera 0.004
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 271 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 2e-31
 Identities = 50/110 (45%), Positives = 75/110 (68%)

Query: 36  KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGN 95
           KV L+CG+DLLESFA+P  W  E +  I  N+G+IC+ R G D +K I ++++L K++ N
Sbjct: 146 KVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSN 205

Query: 96  IKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSND 145
           I +V+E + N ISST+IR  + RG SI+YL  D V +YI +  LY + ++
Sbjct: 206 IHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSESE 255
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Length = 233 Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 213 Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 189 Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 164 Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 167 Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 157 Back     information, alignment and structure
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 157 Back     information, alignment and structure
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 163 Back     information, alignment and structure
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 157 Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Length = 223 Back     information, alignment and structure
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Length = 160 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query146
d1nuua_233 Cytosolic NMN/NAMN adenylyltransferase {Human (Hom 100.0
d1kr2a_271 Nicotinamide mononucleotide (NMN) adenylyltransfer 100.0
d1k4ma_213 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.92
d1kama_189 Nicotinamide mononucleotide (NMN) adenylyltransfer 99.87
d1jhda2223 ATP sulfurylase catalytic domain {Sulfur-oxidizing 99.86
d1vlha_157 Phosphopantetheine adenylyltransferase {Thermotoga 98.98
d1ej2a_167 Nicotinamide mononucleotide (NMN) adenylyltransfer 98.98
d1od6a_160 Phosphopantetheine adenylyltransferase {Thermus th 98.94
d1tfua_157 Phosphopantetheine adenylyltransferase {Mycobacter 98.93
d1qjca_157 Phosphopantetheine adenylyltransferase {Escherichi 98.88
d1o6ba_163 Phosphopantetheine adenylyltransferase {Bacillus s 98.88
d1f9aa_164 Nicotinamide mononucleotide (NMN) adenylyltransfer 98.71
d1mrza2157 FMN adenylyltransferase domain of bifunctional FAD 95.56
d1g8fa2221 ATP sulfurylase catalytic domain {Baker's yeast (S 94.49
d1x6va2235 ATP sulfurylase catalytic domain {Human (Homo sapi 93.33
d1v47a2214 ATP sulfurylase catalytic domain {Thermus thermoph 91.25
d1lw7a1163 Transcriptional regulator NadR, NMN-adenylyltransf 88.39
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Cytosolic NMN/NAMN adenylyltransferase
species: Human (Homo sapiens), FKSG76 [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=223.12  Aligned_cols=141  Identities=32%  Similarity=0.596  Sum_probs=116.4

Q ss_pred             cccccCCCccchHHHHHHHHHHhhhcc-------------cCcCCCceEEEEeehhhhhhCCCCCCCchhHHHhhhccee
Q 032136            2 MLQANQSGYQRTLTVLSRVKNFLIEAG-------------LISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFG   68 (146)
Q Consensus         2 d~E~~~~~~syT~~tL~~l~~~~~~~~-------------~~~~~~~~~~fiiG~D~l~~l~~w~~W~~~~~~~l~~~~~   68 (146)
                      |+|+.+++++||++||++|+++|+...             ..+.+..+++||||+|++.+|++|+.|+..+.++|+++++
T Consensus        80 ~~e~~~~~~s~ti~tl~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~~~~wk~~~~~~~~~il~~~~  159 (233)
T d1nuua_          80 PWESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFG  159 (233)
T ss_dssp             CHHHHSSSCCCHHHHHHHHHHHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHHHTC
T ss_pred             hHHHhCCCCccHHHHHHHHHHHhcccccccccccccchhccccCCCccEEEEEccchhhhcchhhhhcchhHHHHHhhCc
Confidence            789999999999999999999985310             0122348999999999999999999998766789999999


Q ss_pred             EEEEecCCCChhhhccchHHhhhcCCCeEEEecCCCceeeHHHHHHHHHcCCCCCccChHHHHHHHHhcCCCCC
Q 032136           69 VICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLN  142 (146)
Q Consensus        69 ~iV~~R~g~~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~YI~~~~LY~~  142 (146)
                      |+|++|+|............+.....++.++......+||||+||++++.|++++++||++|.+||++|+||.+
T Consensus       160 ~iv~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ISST~IR~~l~~g~~i~~lvp~~V~~YI~~~~LY~~  233 (233)
T d1nuua_         160 LVCVGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVITYIKDHGLYTK  233 (233)
T ss_dssp             EEEECCTTCCHHHHHHHCHHHHHTGGGEEEECCSCCCCCCHHHHHHHHHTTCCCBTTBCHHHHHHHHHTTCSCC
T ss_pred             EEEEeCCCCchhhhhhhHHHHhhccCCEEEecCCccccCCHHHHHHHHHcCCCchhhCCHHHHHHHHHcCCCCC
Confidence            99999999887654333344555566777776455689999999999999999999999999999999999974
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Back     information, alignment and structure
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure