Citrus Sinensis ID: 032147

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MLGLRVVRRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDSDSDGIKQHHNRRGQP
Secondary Structure (PSIPRED)
cccccEEEEEccccccccccccccccccEEEEEEEEccccEEEEEEEEEcEEcccccccccccccccccccccccccEEEEEEEEEcccccEEEEEcccccccEEEEccccccccEEEEEEEEEEEccccccHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEcccccEEEEEEccccccccccccccccccccEEEEcccccccccccccccccccEcccEEEEcccccccccccccHHHcccccccccHccccccccccccHHcccccccccccEEEEEEccccccccccccccccccc
Coil and Loop (DISEMBL)
mlglrvvrratpstvvrnriedesksngvplslsfkkpswvvrteSNVRklarkkpeppcivchgtgrvdcyncsgkgrtnkthltmlprgewpkwcktcsgggliycsrclgtgeyrypmgfhfvkksdsdsdgikqhhnrrgqp
Flexible Loop (DISEMBL)
mlglrvvrratpstvvrnriedesksngvplslsfkkpswvvrtesnvrklarkkpeppcivchgtgrvdcyncsGKGRTNkthltmlprgewpkWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKksdsdsdgikqhhnrrgqp
Low Complexity Region (SEG)
MLGLRVVRRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDSDSDGIKQHHNRRGQP
Disordered region (IsUnstruct)
***************************************WVVR***************PCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFV********************
Disordered Region (DISOPRED)
********************************LSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLP*GEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFH**********************
Disordered Region (DISEMBL)
MLGLRVVRRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKK******************
Disordered Region (DISPRO)
*LGLRVVRRATPSTVVRNRIED*********SLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKS*****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGLRVVRRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDSDSDGIKQHHNRRGQP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
255571133	151	conserved hypothetical protein [Ricinus	0.678	0.655	0.747	1e-38
449454556	156	PREDICTED: uncharacterized protein LOC10	0.952	0.891	0.533	6e-38
224132086	96	predicted protein [Populus trichocarpa]	0.657	1.0	0.770	3e-37
225453224	156	PREDICTED: uncharacterized protein LOC10	0.794	0.743	0.632	8e-36
449522853	152	PREDICTED: uncharacterized protein LOC10	0.924	0.888	0.520	2e-34
242076966	130	hypothetical protein SORBIDRAFT_06g02684	0.684	0.769	0.64	9e-34
226495159	133	uncharacterized protein LOC100276310 [Ze	0.684	0.751	0.63	1e-32
297830390	136	hypothetical protein ARALYDRAFT_479249 [	0.835	0.897	0.539	8e-32
218195452	132	hypothetical protein OsI_17168 [Oryza sa	0.671	0.742	0.591	1e-31
115460194	132	Os04g0589200 [Oryza sativa Japonica Grou	0.671	0.742	0.591	2e-31

>gi|255571133|ref|XP_002526517.1| conserved hypothetical protein [Ricinus communis] gi|223534192|gb|EEF35908.1| conserved hypothetical protein [Ricinus communis]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 83/99 (83%)

Query: 33  LSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGE 92
           LS  KPSW+VRTESNVRK  RKKP P C+VCHGTGRVDC+ CSG GRTN  HL MLP+GE
Sbjct: 45  LSLSKPSWIVRTESNVRKEIRKKPHPQCVVCHGTGRVDCHLCSGLGRTNFIHLAMLPKGE 104

Query: 93  WPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDS 131
           WPKWC+TC G GL YCSRCLGTGEYRY MGFHF+++ D+
Sbjct: 105 WPKWCRTCGGSGLSYCSRCLGTGEYRYIMGFHFMEQRDN 143

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454556|ref|XP_004145020.1| PREDICTED: uncharacterized protein LOC101211268 [Cucumis sativus] gi|449472794|ref|XP_004153696.1| PREDICTED: uncharacterized protein LOC101214526 [Cucumis sativus]

 Score =  161 bits (408), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 79/148 (53%), Positives = 104/148 (70%), Gaps = 9/148 (6%)

Query: 6   VVRRATPSTVVRNRIEDESKSNGVPLS--------LSFKKPSWVVRTESNVRKLARKKPE 57
           +  RATP  +   +++  + SNGV  S        LS  KPSW+VRTESNVR+   KKP+
Sbjct: 1   MAARATPIILPALQLK-ATDSNGVTPSGNSIFLPRLSISKPSWIVRTESNVRREKIKKPD 59

Query: 58  PPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEY 117
           PPC++C+G+GRVDC++C G+GRTN   L MLP+GEWPKWC+TC G GL YCSRCLGTGEY
Sbjct: 60  PPCVICNGSGRVDCHHCCGRGRTNFVDLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEY 119

Query: 118 RYPMGFHFVKKSDSDSDGIKQHHNRRGQ 145
           RY MGF F+K  + +S   K++ ++  Q
Sbjct: 120 RYIMGFQFMKMENDESKDPKKYEDQTKQ 147

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132086|ref|XP_002321252.1| predicted protein [Populus trichocarpa] gi|222862025|gb|EEE99567.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 80/96 (83%)

Query: 30  PLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLP 89
           P  LS  KPSW+VRTESNVRK  RK+P+PPC VCHGTGRVDC +CSG+GRTN  HL MLP
Sbjct: 1   PRHLSLTKPSWIVRTESNVRKEIRKRPDPPCEVCHGTGRVDCPHCSGQGRTNCVHLAMLP 60

Query: 90  RGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHF 125
            GEWPKWC+TC G GL YCSRCLGTGEYRY MGFHF
Sbjct: 61  EGEWPKWCRTCGGSGLSYCSRCLGTGEYRYIMGFHF 96

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453224|ref|XP_002263419.1| PREDICTED: uncharacterized protein LOC100259890 [Vitis vinifera] gi|297734695|emb|CBI16746.3| unnamed protein product [Vitis vinifera]

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 85/117 (72%), Gaps = 1/117 (0%)

Query: 26  SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHL 85
           SN +P  LS  KPSWVVRTESNVRK  R+ P+ PC VC G+GRVDC++C G+GRTN   L
Sbjct: 22  SNSLP-HLSISKPSWVVRTESNVRKTQRRMPDSPCEVCKGSGRVDCHHCQGRGRTNCVQL 80

Query: 86  TMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDSDSDGIKQHHNR 142
            MLP+GEWPKWC+TC G GL YCSRCLGTGEYR  MGFHF+K+    S   K    R
Sbjct: 81  IMLPKGEWPKWCRTCGGSGLSYCSRCLGTGEYRDIMGFHFMKRGTDQSQDHKNSQVR 137

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522853|ref|XP_004168440.1| PREDICTED: uncharacterized protein LOC101225031 [Cucumis sativus]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/148 (52%), Positives = 102/148 (68%), Gaps = 13/148 (8%)

Query: 6   VVRRATPSTVVRNRIEDESKSNGVPLS--------LSFKKPSWVVRTESNVRKLARKKPE 57
           +  RATP  +   +++  + SNGV  S        LS  KPSW+VRTE   RK+  KKP+
Sbjct: 1   MAARATPIILPALQLK-ATDSNGVTPSGNSIFLPRLSISKPSWIVRTEK--RKI--KKPD 55

Query: 58  PPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEY 117
           PPC++C+G+GRVDC++C G+GRTN   L MLP+GEWPKWC+TC G GL YCSRCLGTGEY
Sbjct: 56  PPCVICNGSGRVDCHHCCGRGRTNFVDLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEY 115

Query: 118 RYPMGFHFVKKSDSDSDGIKQHHNRRGQ 145
           RY MGF F+K  + +S   K++ ++  Q
Sbjct: 116 RYIMGFQFMKMENDESKDPKKYEDQTKQ 143

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242076966|ref|XP_002448419.1| hypothetical protein SORBIDRAFT_06g026840 [Sorghum bicolor] gi|241939602|gb|EES12747.1| hypothetical protein SORBIDRAFT_06g026840 [Sorghum bicolor]

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 75/100 (75%)

Query: 27  NGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLT 86
            G P  L   KPSW+VRTESNVR+   K+P+PPC +C GTGR+DC NC G+GRTN+  L 
Sbjct: 27  EGAPRQLGVSKPSWIVRTESNVRRERPKRPDPPCTICRGTGRIDCRNCFGRGRTNRADLV 86

Query: 87  MLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFV 126
           MLP+GEWP+WC+ C G GL YC RC GTGEYR PMGFHF 
Sbjct: 87  MLPKGEWPQWCRICGGSGLDYCLRCHGTGEYREPMGFHFT 126

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495159|ref|NP_001143602.1| uncharacterized protein LOC100276310 [Zea mays] gi|195623124|gb|ACG33392.1| hypothetical protein [Zea mays] gi|414585696|tpg|DAA36267.1| TPA: hypothetical protein ZEAMMB73_842195 [Zea mays]

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 73/100 (73%)

Query: 27  NGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLT 86
            G P  L   KPSW+VRTESNVR+   K+P+PPC +C GTGR+DC NC G+GRTN   + 
Sbjct: 30  QGAPKRLGASKPSWIVRTESNVRRERAKRPDPPCTICKGTGRIDCRNCFGRGRTNHADVA 89

Query: 87  MLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFV 126
           MLP GEWP+WC+ C G GL YC RC GTGEYR PMGFHF 
Sbjct: 90  MLPNGEWPQWCRICGGSGLDYCLRCHGTGEYREPMGFHFT 129

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830390|ref|XP_002883077.1| hypothetical protein ARALYDRAFT_479249 [Arabidopsis lyrata subsp. lyrata] gi|297328917|gb|EFH59336.1| hypothetical protein ARALYDRAFT_479249 [Arabidopsis lyrata subsp. lyrata]

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 4/126 (3%)

Query: 12  PSTVVRNRIED---ESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR 68
           P  ++  R E+    SKS      L   KPSW+VRT+S  +   ++K +  C++CHGTGR
Sbjct: 9   PPALMAVRAEEGVPNSKSTQGKTRLYLTKPSWIVRTQSGAKTCMKRKAKGRCVICHGTGR 68

Query: 69  VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKK 128
           VDC+NC GKGRTN   + MLP+GEWPKWCK+C G GL  CSRCLGTGEYRY MGF F+ +
Sbjct: 69  VDCFNCCGKGRTNCVDVEMLPKGEWPKWCKSCGGSGLSDCSRCLGTGEYRYIMGFRFLNQ 128

Query: 129 SDSDSD 134
           +D D D
Sbjct: 129 ND-DGD 133

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218195452|gb|EEC77879.1| hypothetical protein OsI_17168 [Oryza sativa Indica Group]

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 74/98 (75%)

Query: 29  VPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTML 88
            P S+   +PSW+VR+ESN+R+   K+P+PPC +C GTG++DC NC G+GRTN   L ML
Sbjct: 30  APPSVLISRPSWIVRSESNIRRERPKRPDPPCTICRGTGKIDCRNCFGRGRTNHADLVML 89

Query: 89  PRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFV 126
           P+GEWP+WC+ C G GL YC RC GTGE+R PMGFHF 
Sbjct: 90  PKGEWPQWCRICGGSGLDYCHRCHGTGEFREPMGFHFA 127

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115460194|ref|NP_001053697.1| Os04g0589200 [Oryza sativa Japonica Group] gi|38346709|emb|CAE04859.2| OSJNBa0086O06.7 [Oryza sativa Japonica Group] gi|113565268|dbj|BAF15611.1| Os04g0589200 [Oryza sativa Japonica Group] gi|215696977|dbj|BAG90971.1| unnamed protein product [Oryza sativa Japonica Group] gi|222629446|gb|EEE61578.1| hypothetical protein OsJ_15954 [Oryza sativa Japonica Group]

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 74/98 (75%)

Query: 29  VPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTML 88
            P S+   +PSW+VR+ESN+R+   K+P+PPC +C GTG++DC NC G+GRTN   L ML
Sbjct: 30  APPSVLISRPSWIVRSESNIRRERPKRPDPPCTICRGTGKIDCRNCFGRGRTNHADLVML 89

Query: 89  PRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFV 126
           P+GEWP+WC+ C G GL YC RC GTGE+R PMGFHF 
Sbjct: 90  PKGEWPQWCRICGGSGLDYCHRCHGTGEFREPMGFHFA 127

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:4010713752	135	ENA "ENHANCER OF ATNSI ACTIVIT	0.753	0.814	0.585	5.1e-35
TAIR|locus:2005585	154	LQY1 "LOW QUANTUM YIELD OF PHO	0.698	0.662	0.290	3.4e-06
MGI|MGI:2443733	340	Ssu2 "ssu-2 homolog (C. elegan	0.383	0.164	0.385	1.5e-05
UNIPROTKB|F1PZB5	380	C3orf32 "Uncharacterized prote	0.369	0.142	0.381	6.1e-05
TAIR|locus:2097164	159	AT3G44020 "AT3G44020" [Arabido	0.376	0.345	0.369	0.00024
UNIPROTKB|I3LP29	375	C3orf32 "Uncharacterized prote	0.383	0.149	0.385	0.00038
UNIPROTKB|Q9Y2M2	353	SSUH2 "Protein SSUH2 homolog"	0.369	0.152	0.381	0.00051
TAIR|locus:2009482	110	AT1G22630 [Arabidopsis thalian	0.342	0.454	0.357	0.00057
UNIPROTKB|F1N504	340	Bt.74373 "Uncharacterized prot	0.383	0.164	0.368	0.0008
TAIR|locus:2169243	97	AT5G43260 [Arabidopsis thalian	0.321	0.484	0.393	0.00093

TAIR|locus:4010713752 ENA "ENHANCER OF ATNSI ACTIVITY" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 65/111 (58%), Positives = 80/111 (72%)

Query:    24 SKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKT 83
             SKS      L   KPSW+VRT+S  +   + K +  C++CHG+GRVDC+NC GKGRTN  
Sbjct:    24 SKSTQGKTRLYLTKPSWIVRTQSGAKTCMKSKAKGRCVICHGSGRVDCFNCCGKGRTNCV 83

Query:    84 HLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRYPMGFHFVKKSDSDSD 134
              + MLPRGEWPKWCK+C G GL  CSRCLGTGEYRY MGF F+ ++D D+D
Sbjct:    84 DVEMLPRGEWPKWCKSCGGSGLSDCSRCLGTGEYRYIMGFRFLNQND-DAD 133

GO:0005634 "nucleus" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2005585 LQY1 "LOW QUANTUM YIELD OF PHOTOSYSTEM II 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 34/117 (29%), Positives = 52/117 (44%)

Query:     5 RVVRRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCH 64
             R+     P+TVV   +   S + G+ + + +         E+ +   A+++   PC  C+
Sbjct:    41 RIKAELDPNTVVAISVGVASVALGIGIPVFY---------ETQIDNAAKRENTQPCFPCN 91

Query:    65 GTGRVDCYNCSGKGRTNKTHLTMLPRGEWP-KWCKTCSGGGLIYCSRCLGTG-EYRY 119
             GTG   C  C G G  N T    L  GE     C  C G G + C+ C G+G + RY
Sbjct:    92 GTGAQKCRLCVGSG--NVT--VELGGGEKEVSNCINCDGAGSLTCTTCQGSGVQPRY 144

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0003756 "protein disulfide isomerase activity" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010206 "photosystem II repair" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

MGI|MGI:2443733 Ssu2 "ssu-2 homolog (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 108 (43.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 22/57 (38%), Positives = 26/57 (45%)

Query:    60 CIVCHGTGRVDCYNCSGKGRTNKTHLTMLPR-GEWPKWCKTCSGGGLIYCSRCLGTG 115
             C  CHG GR  C  C G G    +  +   R  + P+ C  CSG G   CS C G G
Sbjct:   178 CHKCHGRGRYKCSGCHGAGMVRCSSCSGTKRKAKQPRRCHLCSGSGRRRCSTCSGRG 234

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1PZB5 C3orf32 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 106 (42.4 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 21/55 (38%), Positives = 28/55 (50%)

Query:    60 CIVCHGTGRVDCYNCSG-KGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLG 113
             C  CHG G V C +CSG K +  ++    +  G   + C TCSG G   C+ C G
Sbjct:   193 CSGCHGAGMVRCSSCSGAKRKAKQSRRCQMCSGSGRRRCSTCSGRGNKTCATCKG 247

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2097164 AT3G44020 "AT3G44020" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
 Identities = 24/65 (36%), Positives = 31/65 (47%)

Query:    55 KPEP-PCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLG 113
             K +P PC  C G G   C  C  +G+  K    M+        CK C G GLI+C +C G
Sbjct:   102 KGDPVPCERCGGNGGTKCVFCL-EGKM-KVESGMVD-------CKVCKGSGLIFCKKCGG 152

Query:   114 TGEYR 118
             +G  R
Sbjct:   153 SGYSR 157

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

UNIPROTKB|I3LP29 C3orf32 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 103 (41.3 bits), Expect = 0.00038, P = 0.00038
 Identities = 22/57 (38%), Positives = 25/57 (43%)

Query:    60 CIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWP-KWCKTCSGGGLIYCSRCLGTG 115
             C  CHG GR  C  C G G       +   R   P + C+ CSG G   CS C G G
Sbjct:   177 CHKCHGRGRYKCSGCHGAGTVRCPSCSGAKRKAKPARRCQMCSGSGRRRCSTCSGRG 233

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

UNIPROTKB|Q9Y2M2 SSUH2 "Protein SSUH2 homolog" [Homo sapiens (taxid:9606)]

 Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query:    60 CIVCHGTGRVDCYNCSG-KGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLG 113
             C  CHG G V C +C G K +  ++    L  G   + C TCSG G   C+ C G
Sbjct:   166 CSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCATCKG 220

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2009482 AT1G22630 [Arabidopsis thaliana (taxid:3702)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 20/56 (35%), Positives = 26/56 (46%)

Query:    60 CIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTG 115
             C  C   G ++C  C G G+ NK +  M  R  W   C  C G G+  C +C G G
Sbjct:    51 CETCGAKGAIECPGCKGTGK-NKKNGNMFER--WK--CFDCQGFGMKSCPKC-GKG 100

GO:0009507 "chloroplast" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

UNIPROTKB|F1N504 Bt.74373 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 101 (40.6 bits), Expect = 0.00080, P = 0.00080
 Identities = 21/57 (36%), Positives = 26/57 (45%)

Query:    60 CIVCHGTGRVDCYNCSGKGRTNKTHLTMLPR-GEWPKWCKTCSGGGLIYCSRCLGTG 115
             C  CHG GR  C  C G G    +  +   R  +  + C+ CSG G   CS C G G
Sbjct:   178 CHKCHGRGRYKCSGCHGAGTARCSSCSGAKRKAKSARRCQMCSGSGRRRCSTCSGRG 234

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2169243 AT5G43260 [Arabidopsis thaliana (taxid:3702)]

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 24/61 (39%), Positives = 30/61 (49%)

Query:    58 PPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEY 117
             P C  C+GTGRV C+ CS   R +   +     G     C+ CSG G   CS C G+G  
Sbjct:    36 PRCPTCNGTGRVTCF-CS---RWSDGDV-----G-----CRRCSGSGRAACSNCGGSGTG 81

Query:   118 R 118
             R
Sbjct:    82 R 82

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XIV.4165.1 hypothetical protein (96 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
PLN03165	111	PLN03165, PLN03165, chaperone protein dnaJ-related	5e-05
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	6e-05
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	6e-05
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-04
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	2e-04
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	0.001
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	0.003

>gnl|CDD|178709 PLN03165, PLN03165, chaperone protein dnaJ-related; Provisional

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 45  ESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKW-CKTCSGG 103
           E+ +   A+++   PC  C GTG   C  C G G         L  GE     C  C G 
Sbjct: 29  ETQIDNAAKRENTQPCFPCSGTGAQVCRFCVGSGNVT----VELGGGEKEVSKCINCDGA 84

Query: 104 GLIYCSRCLGTG 115
           G + C+ C G+G
Sbjct: 85  GSLTCTTCQGSG 96

Length = 111

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 21/120 (17%)

Query: 8   RRATPSTVVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTG 67
            R   S   R   ED        L L+F++  + V  E  + +         C  CHGTG
Sbjct: 106 GRRRRSGPRRG--EDLR----YDLELTFEEAVFGVEKEIEIPRKE------SCETCHGTG 153

Query: 68  RVD------CYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIY---CSRCLGTGEYR 118
                    C  C G G+  +   T     +  + C TC G G I    CS C G G  +
Sbjct: 154 AKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVK 213

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 29  VPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNK 82
             L L+F++ ++    E  V +  +      C VC G+G       V C  C G G+   
Sbjct: 133 YDLELTFEEAAFGTEKEIEVERFEK------CDVCKGSGAKPGSKPVTCPVCHGTGQVRT 186

Query: 83  THLTMLPRGEWPKWCKTCSGGGLIY---CSRCLGTGEYR 118
              T   R    + C  C G G I    C++C GTG  R
Sbjct: 187 RQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIR 225

Length = 386

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 15/94 (15%)

Query: 31  LSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTG------RVDCYNCSGKGRTNKTH 84
           ++L+F++  +    E  + K      E  C  CHG+G      +  C +C G G+ +   
Sbjct: 123 MTLTFEEAVFGKEKEIEIPK------EETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQ 176

Query: 85  LTMLPRGEWPKWCKTCSGGGLIY---CSRCLGTG 115
            T   R    + C  C+G G      C  C G G
Sbjct: 177 NTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKG 210

Length = 376

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 53  RKKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI----YC 108
               E  C VCHGTG  D ++  G    ++  + +    E P  C  C G G +     C
Sbjct: 14  IVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIP--CPKCRGKGTVTVYDTC 71

Query: 109 SRCLGTGE 116
             C GTG+
Sbjct: 72  PECGGTGK 79

Length = 715

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 48  VRKLARKKPEPPCIVCHGTG------RVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCS 101
           V K  + K   PC  CHGTG         C  C G G   +   T+L   +    C TC+
Sbjct: 145 VEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCN 204

Query: 102 GGGLIY---CSRCLGTG 115
           G G I    C +C G G
Sbjct: 205 GEGKIIKKKCKKCGGEG 221

Length = 386

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 11/66 (16%)

Query: 59  PCIVCHGTG------RVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI---YCS 109
            C  CHG+G         C  C+G G+      T      + + C TC+G G I    C 
Sbjct: 144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTG--FFSFQQTCPTCNGTGKIIKDPCG 201

Query: 110 RCLGTG 115
           +C G G
Sbjct: 202 KCKGKG 207

Length = 371

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.83
PRK14282	369	chaperone protein DnaJ; Provisional	99.78
PRK14278	378	chaperone protein DnaJ; Provisional	99.76
PRK14276	380	chaperone protein DnaJ; Provisional	99.76
PRK14280	376	chaperone protein DnaJ; Provisional	99.76
PRK14298	377	chaperone protein DnaJ; Provisional	99.75
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.75
PRK14296	372	chaperone protein DnaJ; Provisional	99.74
PRK14277	386	chaperone protein DnaJ; Provisional	99.74
PRK14297	380	chaperone protein DnaJ; Provisional	99.74
PRK14281	397	chaperone protein DnaJ; Provisional	99.74
PRK14287	371	chaperone protein DnaJ; Provisional	99.74
PRK14289	386	chaperone protein DnaJ; Provisional	99.73
PRK14279	392	chaperone protein DnaJ; Provisional	99.72
PRK14286	372	chaperone protein DnaJ; Provisional	99.72
PRK14284	391	chaperone protein DnaJ; Provisional	99.71
PRK14285	365	chaperone protein DnaJ; Provisional	99.71
PRK14295	389	chaperone protein DnaJ; Provisional	99.7
PRK14293	374	chaperone protein DnaJ; Provisional	99.7
PRK14300	372	chaperone protein DnaJ; Provisional	99.7
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.7
PRK10767	371	chaperone protein DnaJ; Provisional	99.7
PRK14283	378	chaperone protein DnaJ; Provisional	99.7
PRK14301	373	chaperone protein DnaJ; Provisional	99.7
PRK14288	369	chaperone protein DnaJ; Provisional	99.69
PRK14294	366	chaperone protein DnaJ; Provisional	99.69
PRK14290	365	chaperone protein DnaJ; Provisional	99.68
PRK14291	382	chaperone protein DnaJ; Provisional	99.68
PRK14292	371	chaperone protein DnaJ; Provisional	99.66
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.53
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.51
PLN03165	111	chaperone protein dnaJ-related; Provisional	99.38
KOG2813	406	consensus Predicted molecular chaperone, contains	98.61
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.58
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	98.35
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	98.29
PRK14278	378	chaperone protein DnaJ; Provisional	98.13
PRK14279	392	chaperone protein DnaJ; Provisional	98.13
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	98.12
PRK14288	369	chaperone protein DnaJ; Provisional	98.1
PRK14280	376	chaperone protein DnaJ; Provisional	98.08
PRK14282	369	chaperone protein DnaJ; Provisional	98.08
PRK14296	372	chaperone protein DnaJ; Provisional	98.08
PRK14298	377	chaperone protein DnaJ; Provisional	98.07
PRK14301	373	chaperone protein DnaJ; Provisional	98.07
PRK14300	372	chaperone protein DnaJ; Provisional	98.06
PRK14286	372	chaperone protein DnaJ; Provisional	98.06
PRK14295	389	chaperone protein DnaJ; Provisional	98.05
PRK14284	391	chaperone protein DnaJ; Provisional	98.04
PRK14281	397	chaperone protein DnaJ; Provisional	98.04
PRK14285	365	chaperone protein DnaJ; Provisional	98.03
PRK14290	365	chaperone protein DnaJ; Provisional	98.03
PRK14294	366	chaperone protein DnaJ; Provisional	98.02
PRK14289	386	chaperone protein DnaJ; Provisional	98.01
PRK14277	386	chaperone protein DnaJ; Provisional	97.96
PRK14276	380	chaperone protein DnaJ; Provisional	97.96
PRK10767	371	chaperone protein DnaJ; Provisional	97.94
PRK14297	380	chaperone protein DnaJ; Provisional	97.94
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	97.93
PTZ00037	421	DnaJ_C chaperone protein; Provisional	97.93
PRK14287	371	chaperone protein DnaJ; Provisional	97.92
PRK14292	371	chaperone protein DnaJ; Provisional	97.89
PRK14293	374	chaperone protein DnaJ; Provisional	97.81
PRK14283	378	chaperone protein DnaJ; Provisional	97.77
PRK14291	382	chaperone protein DnaJ; Provisional	97.75
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	97.62
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.42
PLN03165	111	chaperone protein dnaJ-related; Provisional	97.01
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.72
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	96.59
KOG2813	406	consensus Predicted molecular chaperone, contains	96.36
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	96.11
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	94.17
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	91.14
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	90.35
TIGR00630	924	uvra excinuclease ABC, A subunit. This family is b	90.17
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	89.24
TIGR00630	924	uvra excinuclease ABC, A subunit. This family is b	89.13
COG0178	935	UvrA Excinuclease ATPase subunit [DNA replication,	88.15
PRK00349	943	uvrA excinuclease ABC subunit A; Reviewed	87.6
PRK00349	943	uvrA excinuclease ABC subunit A; Reviewed	84.05
PRK00635	1809	excinuclease ABC subunit A; Provisional	82.97
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	81.21
PRK00635	1809	excinuclease ABC subunit A; Provisional	81.12

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=1.4e-20  Score=158.11  Aligned_cols=96  Identities=25%  Similarity=0.512  Sum_probs=90.0

Q ss_pred             ccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCC
Q 032147           25 KSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCK   98 (146)
Q Consensus        25 ~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~   98 (146)
                      .|+.+.|+|+|+|      +|.|.+++|.+++...|+.|+|+|+      .+|+.|+|+|++...+++  |+|+++++|+
T Consensus       116 ~Dl~~~l~isleE------a~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~  187 (371)
T COG0484         116 ADLRYNLEITLEE------AVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCP  187 (371)
T ss_pred             CceEEEEEeEhhh------hccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECC
Confidence            4568999999999      9999999999999999999999987      799999999999988877  8889999999


Q ss_pred             CCCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147           99 TCSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus        99 ~C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      +|+|+|++   +|++|+|.|++++.+.++|+..
T Consensus       188 ~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IP  220 (371)
T COG0484         188 TCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIP  220 (371)
T ss_pred             CCccceeECCCCCCCCCCCCeEeeeeEEEEECC
Confidence            99999999   9999999999999999999954

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=7.8e-19  Score=148.08  Aligned_cols=98  Identities=22%  Similarity=0.444  Sum_probs=91.8

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+++.+.+.|+.|+|+|+      .+|+.|+|+|.+...+++++|+++++++|+.
T Consensus       127 di~~~l~~slee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  200 (369)
T PRK14282        127 DIRYEIEVTLSD------LINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCER  200 (369)
T ss_pred             CeEEEEEEEHHH------hcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCC
Confidence            567899999999      9999999999999999999999996      6899999999999999999999998999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.++++|.+..
T Consensus       201 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~  233 (369)
T PRK14282        201 CGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA  233 (369)
T ss_pred             CCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence            9999998   99999999999999999998553

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=2.2e-18  Score=145.90  Aligned_cols=98  Identities=24%  Similarity=0.499  Sum_probs=91.1

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|+++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+...+++++|+++++++|+.
T Consensus       114 d~~~~l~vtLee------~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  187 (378)
T PRK14278        114 DSLLRMRLDLEE------CATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPT  187 (378)
T ss_pred             CeEEEEEEEHHH------hcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCC
Confidence            467889999999      9999999999999999999999996      7899999999999888888899988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       188 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  220 (378)
T PRK14278        188 CRGVGEVIPDPCHECAGDGRVRARREITVKIPA  220 (378)
T ss_pred             CCccceeeCCCCCCCCCceeEecceEEEEEECC
Confidence            9999998   99999999999999999998544

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=2.4e-18  Score=145.63  Aligned_cols=97  Identities=25%  Similarity=0.418  Sum_probs=90.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+...+++++|+++.+++|+.
T Consensus       121 di~~~l~vtLee------~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  194 (380)
T PRK14276        121 DLQYRVNLDFEE------AIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDV  194 (380)
T ss_pred             CEEEEEEEEHHH------hcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCC
Confidence            467889999999      9999999999999999999999996      6899999999999998999999988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|...
T Consensus       195 C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip  226 (380)
T PRK14276        195 CHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIP  226 (380)
T ss_pred             CCCCCccccCCCCCCCCceEEEEEEEEEEEeC
Confidence            9999998   9999999999999999988854

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=2.5e-18  Score=145.39  Aligned_cols=97  Identities=25%  Similarity=0.468  Sum_probs=90.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|+++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+...+++++|+++++++|+.
T Consensus       118 di~~~l~vtLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  191 (376)
T PRK14280        118 DLQYTMTLTFEE------AVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPH  191 (376)
T ss_pred             CEEEEEEEEHHH------HhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCC
Confidence            567899999999      9999999999999999999999995      6899999999999888889999988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|...
T Consensus       192 C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip  223 (376)
T PRK14280        192 CNGTGQEIKEKCPTCHGKGKVRKRKKINVKIP  223 (376)
T ss_pred             CCCCCceecCCCCCCCCceEEEEEEEEEEEeC
Confidence            9999998   9999999999999999998844

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=2e-18  Score=146.07  Aligned_cols=98  Identities=28%  Similarity=0.460  Sum_probs=90.4

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      .+|+.|+|+|.+...++.++|+++++++|+.
T Consensus       116 di~~~l~vslee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  189 (377)
T PRK14298        116 DLRYDLYITLEE------AAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCST  189 (377)
T ss_pred             CEEEEEEEEHHH------hhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCC
Confidence            567899999999      9999999999999999999999996      7899999999999888877777889999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.++++|....
T Consensus       190 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ipp  222 (377)
T PRK14298        190 CHGRGQVIESPCPVCSGTGKVRKTRKITVNVPA  222 (377)
T ss_pred             CCCCCcccCCCCCCCCCccEEEEEEEEEecCCC
Confidence            9999998   99999999999999999998443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.75  E-value=2.7e-18  Score=143.84  Aligned_cols=98  Identities=28%  Similarity=0.482  Sum_probs=91.8

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+....++++|+++++++|+.
T Consensus       118 d~~~~l~vsLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  191 (354)
T TIGR02349       118 DLRYDLELTFEE------AVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPT  191 (354)
T ss_pred             CeEEEEEEEHHH------HhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCC
Confidence            567999999999      9999999999999999999999995      6899999999999999999999988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|++..
T Consensus       192 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~  224 (354)
T TIGR02349       192 CGGEGKIIKEPCSTCKGKGRVKERKTITVKIPA  224 (354)
T ss_pred             CCCcceecCCCCCCCCCCcEecccceEEEEECC
Confidence            9999998   99999999999999999998543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=4.7e-18  Score=143.59  Aligned_cols=98  Identities=26%  Similarity=0.442  Sum_probs=88.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      .+|+.|+|+|.+...++.++.+++++++|+.
T Consensus       124 di~~~l~ltlee------~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~  197 (372)
T PRK14296        124 SVSLDIYLTFKE------LLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNV  197 (372)
T ss_pred             CeEEEeeccHHH------hhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCC
Confidence            567899999999      9999999999999999999999996      6899999999999888776644577899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.++++|.+..
T Consensus       198 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  230 (372)
T PRK14296        198 CNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPK  230 (372)
T ss_pred             cCCcceeecccccCCCCceEEEEEEEEEEEECC
Confidence            9999998   99999999999999999998543

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=4.7e-18  Score=144.13  Aligned_cols=97  Identities=28%  Similarity=0.473  Sum_probs=90.5

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++++.+.+.+.|+.|+|+|.      .+|+.|+|+|.+...+++++|+++..++|+.
T Consensus       130 di~~~l~vtLee------~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  203 (386)
T PRK14277        130 DIRYDLELTFEE------AAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDR  203 (386)
T ss_pred             CEEEEEEEEHHH------HhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCC
Confidence            467899999999      9999999999999999999999996      7899999999999999999999988899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|...
T Consensus       204 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip  235 (386)
T PRK14277        204 CHGEGKIITDPCNKCGGTGRIRRRRKIKVNIP  235 (386)
T ss_pred             CCcceeeccCCCCCCCCCcEEeeeeEEEEecC
Confidence            9999998   9999999999999999998854

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=6.9e-18  Score=142.84  Aligned_cols=97  Identities=25%  Similarity=0.468  Sum_probs=91.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++++.+.+.+.|+.|+|+|.      .+|+.|+|+|++...++.++|+++++.+|+.
T Consensus       123 di~~~l~vsLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  196 (380)
T PRK14297        123 DIEYTINLTFEE------AVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDK  196 (380)
T ss_pred             CEEEEEEEEHHH------hcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCC
Confidence            577899999999      9999999999999999999999996      6899999999999888888999999999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |+|+|.+   +|..|+|.|++++.+.++|.+.
T Consensus       197 C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip  228 (380)
T PRK14297        197 CGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVP  228 (380)
T ss_pred             CCCCceEcCCCCCCCCCCeEEEeEeEEEEEeC
Confidence            9999998   9999999999999999999965

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=5.6e-18  Score=144.17  Aligned_cols=98  Identities=27%  Similarity=0.519  Sum_probs=91.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCcccceeCCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTC  100 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  100 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.     .+|+.|+|+|.+....++++|+++++++|+.|
T Consensus       138 di~~~l~vtLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  211 (397)
T PRK14281        138 DLKIRLKLTLEE------IAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTC  211 (397)
T ss_pred             CEEEEEEeEHHH------HhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCC
Confidence            567899999999      9999999999999999999999996     68999999999998888999999889999999


Q ss_pred             CCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          101 SGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       101 ~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      .|+|++   +|+.|+|.|++.+.++++|++..
T Consensus       212 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  243 (397)
T PRK14281        212 GGEGRVVKDRCPACYGEGIKQGEVTVKVTVPA  243 (397)
T ss_pred             cceeeeeCCCCCCCCCCccEecceEEEEecCC
Confidence            999998   99999999999999999988543

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=8.1e-18  Score=142.11  Aligned_cols=97  Identities=27%  Similarity=0.487  Sum_probs=90.7

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|++...+++++|+++.+++|+.
T Consensus       113 d~~~~l~vslee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  186 (371)
T PRK14287        113 DLQYTMTLEFKE------AVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHH  186 (371)
T ss_pred             CEEEEEEEEHHH------hcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCC
Confidence            567899999999      9999999999999999999999995      6899999999999999999999988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |.|+|++   +|..|+|.|++.+.+.++|.+.
T Consensus       187 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip  218 (371)
T PRK14287        187 CEGTGKIIKQKCATCGGKGKVRKRKKINVKVP  218 (371)
T ss_pred             CCCCCccccccCCCCCCeeEEeeeEEEEEEEC
Confidence            9999998   9999999999999888988854

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.73  E-value=1.2e-17  Score=141.67  Aligned_cols=98  Identities=30%  Similarity=0.510  Sum_probs=91.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++++.|.|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      ..|+.|+|+|.+....++++|+++.+.+|+.
T Consensus       129 di~~~l~vsLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~  202 (386)
T PRK14289        129 DLRVKVKLNLKE------ISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPT  202 (386)
T ss_pred             CeEEEEEEEHHH------hhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCC
Confidence            567899999999      9999999999999999999999996      7899999999999999999999988999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|++..
T Consensus       203 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  235 (386)
T PRK14289        203 CNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPA  235 (386)
T ss_pred             CCccccccCcCCCCCCCCcEEeeeEEEEEEeCC
Confidence            9999998   99999999999999999998544

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=1.5e-17  Score=141.36  Aligned_cols=94  Identities=26%  Similarity=0.515  Sum_probs=85.9

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|+      .+|+.|+|+|++....    |+++++++|+.
T Consensus       148 di~~~l~ltLee------~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~  217 (392)
T PRK14279        148 DLETETTLDFVE------AAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTD  217 (392)
T ss_pred             CeEEEEEEEHHH------HhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCC
Confidence            577899999999      9999999999999999999999996      7899999999987664    66788899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       218 C~G~G~~i~~~C~~C~G~g~v~~~~~~~V~Ip~  250 (392)
T PRK14279        218 CRGTGSIIEDPCEECKGTGVTTRTRTINVRIPP  250 (392)
T ss_pred             CCceeEEeCCcCCCCCCCeEEEEeeeeEEEeCC
Confidence            9999998   99999999999999999988543

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=1.7e-17  Score=140.23  Aligned_cols=94  Identities=21%  Similarity=0.411  Sum_probs=85.9

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|+|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      .+|+.|+|+|.+....    |+++++++|+.
T Consensus       125 di~~~l~vtLee------~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~  194 (372)
T PRK14286        125 DLRYNLEVSLED------AALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPT  194 (372)
T ss_pred             CeeEEEEEEHHH------HhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCC
Confidence            567889999999      9999999999999999999999996      7899999999987654    77888999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|....
T Consensus       195 C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~  227 (372)
T PRK14286        195 CRGKGTVISNPCKTCGGQGLQEKRRTINIKIPP  227 (372)
T ss_pred             CCceeeEecccCCCCCCCcEEecceEEEEEECC
Confidence            9999998   99999999999999999988544

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.71  E-value=2.4e-17  Score=139.99  Aligned_cols=93  Identities=27%  Similarity=0.494  Sum_probs=85.3

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+...|+.|+|+|+      .+|+.|+|+|.+....    |+++++++|+.
T Consensus       133 d~~~~l~vslee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~  202 (391)
T PRK14284        133 SKKVHITLSFEE------AAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPE  202 (391)
T ss_pred             CeEEEEEEEHHH------HhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCC
Confidence            467899999999      9999999999999999999999996      7899999999988654    77888999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |+|+|++   +|+.|+|.|++++.++++|++.
T Consensus       203 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip  234 (391)
T PRK14284        203 CGGEGRVITDPCSVCRGQGRIKDKRSVHVHIP  234 (391)
T ss_pred             CCCCCcccCCcCCCCCCcceecceEEEEEEEC
Confidence            9999998   9999999999999999999843

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.71  E-value=2.4e-17  Score=139.02  Aligned_cols=94  Identities=19%  Similarity=0.327  Sum_probs=85.5

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      .+|+.|+|+|++..    .+|+++++++|+.
T Consensus       121 di~~~l~vtlee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~  190 (365)
T PRK14285        121 DLTYQIEISLED------AYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQ----GGGFFRVTTTCPK  190 (365)
T ss_pred             CEEEEEEEEHHH------hhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEe----cCceeEEeeecCC
Confidence            467889999999      9999999999999999999999996      68999999999875    3478888999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|++..
T Consensus       191 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  223 (365)
T PRK14285        191 CYGNGKIISNPCKSCKGKGSLKKKETIELKIPA  223 (365)
T ss_pred             CCCcccccCCCCCCCCCCCEEeccEEEEEEECC
Confidence            9999998   99999999999999999998544

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=3.3e-17  Score=139.21  Aligned_cols=94  Identities=27%  Similarity=0.522  Sum_probs=85.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.+++|++.+.+.|..|+|+|.      .+|+.|+|+|.+....    |+|+++++|+.
T Consensus       141 di~~~l~lsLee------~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~  210 (389)
T PRK14295        141 DVESEVTLSFTE------AIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPD  210 (389)
T ss_pred             CEEEEEEEEHHH------HhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCC
Confidence            567899999999      9999999999999999999999996      7899999999988664    66788899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       211 C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~  243 (389)
T PRK14295        211 CKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA  243 (389)
T ss_pred             CcceeEEeccCCCCCCCCceEeeeeEEEEEeCC
Confidence            9999998   99999999999999999998543

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=3.3e-17  Score=138.40  Aligned_cols=98  Identities=23%  Similarity=0.425  Sum_probs=90.7

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|..|+|+|.      .+|+.|+|+|.+....++++|+++++.+|+.
T Consensus       118 di~~~l~vsLee------~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  191 (374)
T PRK14293        118 DLRYDLKLDFRE------AIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPT  191 (374)
T ss_pred             CeEEEEEeeHHH------HhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCC
Confidence            467889999999      9999999999999999999999996      6899999999999988899999988899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|.|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       192 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ipp  224 (374)
T PRK14293        192 CNGTGQVIEDPCDACGGQGVKQVTKKLKINIPA  224 (374)
T ss_pred             CCcceeEeccCCCCCCCCcccccceEEEEEeCC
Confidence            9999998   99999999999999888888554

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=4.2e-17  Score=137.79  Aligned_cols=94  Identities=26%  Similarity=0.509  Sum_probs=86.0

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+....    |+++++.+|+.
T Consensus       120 di~~~l~~sLee------~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~  189 (372)
T PRK14300        120 DLKYNLTINLEE------AFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQ----GFFTIEQACHK  189 (372)
T ss_pred             CeeEEEEEEHHH------HhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEee----ceEEEEEeCCC
Confidence            577899999999      9999999999999999999999995      7899999999987543    78888899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |.|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       190 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~  222 (372)
T PRK14300        190 CQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPA  222 (372)
T ss_pred             CCccceEeCCCCCCCCCceEEEeeEEEEEEECC
Confidence            9999998   99999999999999999998553

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.70  E-value=4e-17  Score=139.98  Aligned_cols=96  Identities=21%  Similarity=0.377  Sum_probs=86.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCcccceeCCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTC  100 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  100 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.     .+|+.|+|+|.++...++++..++++++|+.|
T Consensus       125 di~~~l~vtLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C  198 (421)
T PTZ00037        125 DIVSHLKVTLEQ------IYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSC  198 (421)
T ss_pred             CEEEEeeeeHHH------HhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCC
Confidence            467889999999      9999999999999999999999996     78999999999887776665233678999999


Q ss_pred             CCccEE-----eCCCCCCeeEEEeeEEEEEEe
Q 032147          101 SGGGLI-----YCSRCLGTGEYRYPMGFHFVK  127 (146)
Q Consensus       101 ~G~G~~-----~C~~C~G~G~~~~~~~~~v~~  127 (146)
                      +|+|++     +|+.|+|.|++.+.+.++|++
T Consensus       199 ~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~I  230 (421)
T PTZ00037        199 NGQGKIIPESKKCKNCSGKGVKKTRKILEVNI  230 (421)
T ss_pred             CCcceeccccccCCcCCCcceeeeeeEEEEee
Confidence            999997     799999999999999999985

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=4.4e-17  Score=137.46  Aligned_cols=93  Identities=24%  Similarity=0.459  Sum_probs=85.4

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      ..|+.|+|+|.+...+    |+++++++|+.
T Consensus       117 di~~~l~vsLee------~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~  186 (371)
T PRK10767        117 DLRYNMEITLEE------AVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQTCPT  186 (371)
T ss_pred             CeEEEEEeehHH------hhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEee----ceEEEEEeCCC
Confidence            567889999999      9999999999999999999999996      5899999999987654    77788899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      |+|+|+.   +|+.|+|.|++.+.+.++|.+.
T Consensus       187 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip  218 (371)
T PRK10767        187 CHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIP  218 (371)
T ss_pred             CCCceeECCCCCCCCCCCceEeeeeeEEEecC
Confidence            9999998   9999999999999999999864

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=3.4e-17  Score=138.56  Aligned_cols=99  Identities=24%  Similarity=0.457  Sum_probs=92.0

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+...+++++|+++++.+|+.
T Consensus       121 di~~~l~vsLed------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~  194 (378)
T PRK14283        121 DIYTEVEITLEE------AASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPD  194 (378)
T ss_pred             CeEEEeeeeHHH------HhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCC
Confidence            567899999999      9999999999999999999999996      6899999999999999999999988899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKSD  130 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~~  130 (146)
                      |.|+|+.   +|..|+|.|++.+.+.++|.+...
T Consensus       195 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG  228 (378)
T PRK14283        195 CQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAG  228 (378)
T ss_pred             CCccceecCCCCCCCCCceeeccceeEEEEECCC
Confidence            9999998   999999999999999999997543

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=3.2e-17  Score=138.58  Aligned_cols=94  Identities=21%  Similarity=0.450  Sum_probs=85.6

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++++.+.+.+.|+.|+|+|.      .+|+.|+|+|.+....    |+++++++|+.
T Consensus       119 di~~~l~vtLee------~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~  188 (373)
T PRK14301        119 DLRYNLTVSFRQ------AAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQ----GFFQIAVPCPV  188 (373)
T ss_pred             CEEEEEeccHHH------HhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEe----eeEEEEEeCCC
Confidence            567889999999      9999999999999999999999996      6899999999987543    77888999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       189 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~  221 (373)
T PRK14301        189 CRGEGRVITHPCPKCKGSGIVQQTRELKVRIPA  221 (373)
T ss_pred             CCceeeecCCCCCCCCCCceeccceEEEEEeCC
Confidence            9999998   99999999999999999988543

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.69  E-value=5.3e-17  Score=137.09  Aligned_cols=94  Identities=23%  Similarity=0.440  Sum_probs=85.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCcccceeCCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTC  100 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  100 (146)
                      ++.+.|.|+|+|      +|+|.++.+++.+.+.|..|+|+|.     .+|+.|+|+|.+...+    |+++++++|+.|
T Consensus       115 di~~~l~vslee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C  184 (369)
T PRK14288        115 DYLQTIELSFKE------AVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQ----GFMSFAQTCGAC  184 (369)
T ss_pred             CeeEeccccHHH------HhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEe----ceEEEEEecCCC
Confidence            567889999999      9999999999999999999999996     7899999999987654    677888899999


Q ss_pred             CCccEE---eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          101 SGGGLI---YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       101 ~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      .|+|++   +|+.|+|.|++.+.+.++|.+..
T Consensus       185 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~  216 (369)
T PRK14288        185 QGKGKIIKTPCQACKGKTYILKDEEIDAIIPE  216 (369)
T ss_pred             CCCceEccccCccCCCcceEEEEEEEEEecCC
Confidence            999998   99999999999999999988543

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.69  E-value=7.2e-17  Score=136.05  Aligned_cols=92  Identities=25%  Similarity=0.482  Sum_probs=84.4

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.++|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.      .+|+.|+|+|.+....    |+++++++|+.
T Consensus       119 d~~~~l~lslee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~  188 (366)
T PRK14294        119 DLRYDLTLPFLE------AAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQ----GFFSIRTTCPR  188 (366)
T ss_pred             CceEEEEeeHHH------hcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEe----eeEEEEeeCCC
Confidence            567889999999      9999999999999999999999996      6899999999987543    77888999999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEe
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVK  127 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~  127 (146)
                      |+|+|++   +|+.|+|.|++.+.+.++|..
T Consensus       189 C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~I  219 (366)
T PRK14294        189 CRGMGKVIVSPCKTCHGQGRVRVSKTVQVKI  219 (366)
T ss_pred             CCCcCeecCcCCCCCCCceEeecceeEEEec
Confidence            9999998   999999999999999999884

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.68  E-value=1.2e-16  Score=134.60  Aligned_cols=95  Identities=25%  Similarity=0.414  Sum_probs=85.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCc--ccceeCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRG--EWPKWCK   98 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~--~~~~~C~   98 (146)
                      ++.+.|.|+|+|      +|+|.++.+.+.+.+.|+.|+|+|.     .+|+.|+|+|++...+.  +|++  +.+++|+
T Consensus       124 di~~~l~lsLee------~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~  195 (365)
T PRK14290        124 DIYTNLDISLED------AYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCR  195 (365)
T ss_pred             CEEEEEEecHHH------hcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEec--cCeEEEEEEEeCC
Confidence            577889999999      9999999999999999999999996     78999999999877653  4665  4578999


Q ss_pred             CCCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147           99 TCSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus        99 ~C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      .|.|+|++   +|+.|+|.|++.+.+.++|.+.
T Consensus       196 ~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip  228 (365)
T PRK14290        196 TCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIP  228 (365)
T ss_pred             CCCCceeEccCCCCCCCCceeEEEeeEEEEEEC
Confidence            99999998   9999999999999999999954

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.68  E-value=9.7e-17  Score=135.97  Aligned_cols=94  Identities=22%  Similarity=0.387  Sum_probs=85.3

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      ++.+.|.|+|+|      +|+|.++++.+.+.+.|..|+|+|.      .+|+.|+|+|.+....    ++++++++|+.
T Consensus       131 di~~~l~vsLee------~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~  200 (382)
T PRK14291        131 DIYQTVEISLEE------AYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRG----GFFRISQTCPT  200 (382)
T ss_pred             CEEEEEEEEHHH------hhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEec----ceEEEEecCCC
Confidence            567899999999      9999999999999999999999995      7899999999987653    66788999999


Q ss_pred             CCCccEE--eCCCCCCeeEEEeeEEEEEEeCC
Q 032147          100 CSGGGLI--YCSRCLGTGEYRYPMGFHFVKKS  129 (146)
Q Consensus       100 C~G~G~~--~C~~C~G~G~~~~~~~~~v~~~~  129 (146)
                      |+|+|.+  +|+.|+|.|++.+.+.++|.+..
T Consensus       201 C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~  232 (382)
T PRK14291        201 CGGEGVLREPCSKCNGRGLVIKKETIKVRIPP  232 (382)
T ss_pred             CCCceEEccCCCCCCCCceEEeeeEEEEEeCC
Confidence            9999987  99999999999999999999543

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.66  E-value=2e-16  Score=133.51  Aligned_cols=97  Identities=21%  Similarity=0.373  Sum_probs=90.0

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-------eEcCCCCCccEEEEEeeeCCCCcccceeCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCK   98 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~   98 (146)
                      ++.+.+.|+|+|      +|+|.++.+.+.+...|+.|+|+|.       .+|+.|+|+|.+....++++|+++++++|+
T Consensus       114 d~~~~l~~sLee------~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~  187 (371)
T PRK14292        114 DLETEARITLEQ------ARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCP  187 (371)
T ss_pred             CeEEEEeccHHH------HcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecC
Confidence            567889999999      9999999999999999999999995       679999999999988888889988899999


Q ss_pred             CCCCccEE---eCCCCCCeeEEEeeEEEEEEeC
Q 032147           99 TCSGGGLI---YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus        99 ~C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      .|+|.|+.   +|+.|+|.|++...+.++|.+.
T Consensus       188 ~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip  220 (371)
T PRK14292        188 TCRGEGQIITDPCTVCRGRGRTLKAETVKVKLP  220 (371)
T ss_pred             CCcccceecCCCCCCCCCceEEeecceEEEEEC
Confidence            99999998   9999999999999998998864

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=8.7e-15  Score=121.91  Aligned_cols=102  Identities=20%  Similarity=0.292  Sum_probs=94.4

Q ss_pred             cccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCc-ccceeC
Q 032147           24 SKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRG-EWPKWC   97 (146)
Q Consensus        24 ~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~-~~~~~C   97 (146)
                      ..++.++++++|+|      +|.|.++++.+++..+|+.|+|+|.     ..|+.|.|+|......++++|+. +++..|
T Consensus       100 g~~~~~~~~~~Le~------~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C  173 (337)
T KOG0712|consen  100 GKDVVHQLKVTLEE------LYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVC  173 (337)
T ss_pred             CCCceEEEEEEHHH------hhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEe
Confidence            45678999999999      9999999999999999999999996     67999999999999999999998 578999


Q ss_pred             CCCCCccEE-----eCCCCCCeeEEEeeEEEEEEeCCCC
Q 032147           98 KTCSGGGLI-----YCSRCLGTGEYRYPMGFHFVKKSDS  131 (146)
Q Consensus        98 ~~C~G~G~~-----~C~~C~G~G~~~~~~~~~v~~~~~~  131 (146)
                      ..|+|+|..     .|+.|.|++++.+.+.++|++...+
T Consensus       174 ~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~  212 (337)
T KOG0712|consen  174 DSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGM  212 (337)
T ss_pred             ccCCCccccccccccCcccccchhhhhhheeeccccCCC
Confidence            999999997     9999999999999999999976654

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.51  E-value=3.4e-14  Score=92.86  Aligned_cols=56  Identities=34%  Similarity=0.755  Sum_probs=48.1

Q ss_pred             CccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE----eCCCCCCee
Q 032147           60 CIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI----YCSRCLGTG  115 (146)
Q Consensus        60 C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~C~~C~G~G  115 (146)
                      |+.|+|+|+      .+|+.|+|+|++...++.++++++++++|+.|+|+|++    +|+.|+|.|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            889999997      89999999999999988777777999999999999999    799999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=99.38  E-value=1.4e-12  Score=93.48  Aligned_cols=63  Identities=29%  Similarity=0.631  Sum_probs=54.6

Q ss_pred             eCCcccCccCcCceeeEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEEeCCCCCCeeEEEe
Q 032147           54 KKPEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCLGTGEYRY  119 (146)
Q Consensus        54 ~~~~~~C~~C~GsG~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~C~~C~G~G~~~~  119 (146)
                      ....+.|..|+|+|..+|+.|+|+|++....   .++++.+++|+.|+|+|+.+|+.|+|.|++..
T Consensus        38 ~~~~v~C~~C~GsG~~~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~Gk~~C~~C~G~G~~~~  100 (111)
T PLN03165         38 RENTQPCFPCSGTGAQVCRFCVGSGNVTVEL---GGGEKEVSKCINCDGAGSLTCTTCQGSGIQPR  100 (111)
T ss_pred             hccCCCCCCCCCCCCcCCCCCcCcCeEEEEe---CCcEEEEEECCCCCCcceeeCCCCCCCEEEee
Confidence            3468999999999999999999999987543   23467789999999999999999999999764

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.61  E-value=3e-08  Score=82.30  Aligned_cols=87  Identities=30%  Similarity=0.461  Sum_probs=63.3

Q ss_pred             EeCeEEEEEeC---CcccCccCcCceeeEcCCCCCccEEEE--------Ee-------------eeCCCCcccceeCCCC
Q 032147           45 ESNVRKLARKK---PEPPCIVCHGTGRVDCYNCSGKGRTNK--------TH-------------LTMLPRGEWPKWCKTC  100 (146)
Q Consensus        45 ~~G~~~~i~~~---~~~~C~~C~GsG~~~C~~C~G~G~~~~--------~~-------------~~~~g~~~~~~~C~~C  100 (146)
                      +.|....+.++   -...|..|.|.|...|+.|+|.|.-..        ..             .+..+......+|++|
T Consensus       172 f~~~~~~~~vphs~~v~~ch~c~gRG~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~~~C~tC  251 (406)
T KOG2813|consen  172 FSGVAHPAVVPHSMIVTFCHACLGRGAMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGIKECHTC  251 (406)
T ss_pred             ccccccceeccchHhhhhhhcccCCCceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCcccCCcc
Confidence            44444444444   357799999999999999999994211        11             1112223456778888


Q ss_pred             CCccEEeCCCCCCeeEEEeeEEEEEEeCCCC
Q 032147          101 SGGGLIYCSRCLGTGEYRYPMGFHFVKKSDS  131 (146)
Q Consensus       101 ~G~G~~~C~~C~G~G~~~~~~~~~v~~~~~~  131 (146)
                      .|+|.++|.+|.|+|.+.....+-|+|++..
T Consensus       252 ~grG~k~C~TC~gtgsll~~t~~vV~wKn~~  282 (406)
T KOG2813|consen  252 KGRGKKPCTTCSGTGSLLNYTRIVVYWKNEK  282 (406)
T ss_pred             cCCCCcccccccCccceeeeEEEEEEeechh
Confidence            8888889999999999999999999999865

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.58  E-value=5.8e-08  Score=82.26  Aligned_cols=76  Identities=18%  Similarity=0.407  Sum_probs=61.2

Q ss_pred             eeecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-------------eEcCCCCCccEEE
Q 032147           15 VVRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-------------VDCYNCSGKGRTN   81 (146)
Q Consensus        15 ~~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-------------~~C~~C~G~G~~~   81 (146)
                      ....+|||++.....++.++-...+..| .-+|.+..   .....|+.|+|+|.             .+|+.|+|+|.++
T Consensus       121 ~l~isleEa~~G~~~~i~~~~~~~C~~C-~GsGak~g---t~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i  196 (371)
T COG0484         121 NLEITLEEAVFGVKKEIRVTRSVTCSTC-HGSGAKPG---TDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKII  196 (371)
T ss_pred             EEEeEhhhhccCceeeEecceeeECCcC-CCCCCCCC---CCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeEC
Confidence            4556899999999999999988855544 22333321   36889999999994             7899999999997


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|++|+|+|++
T Consensus       197 ------------~~pC~~C~G~G~v  209 (371)
T COG0484         197 ------------KDPCGKCKGKGRV  209 (371)
T ss_pred             ------------CCCCCCCCCCCeE
Confidence                        6799999999996

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.35  E-value=1.2e-07  Score=78.06  Aligned_cols=98  Identities=28%  Similarity=0.480  Sum_probs=80.7

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      +..+.+.++|++      +..|.++.+.+.....|..|.|.|.      ..|..|+|.|.......   ..+... +|..
T Consensus       139 ~~~~d~~~~f~~------A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~f~~~-~~~~  208 (288)
T KOG0715|consen  139 DQYYDLSLDFKE------AVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKE---DPFILY-TCSY  208 (288)
T ss_pred             ccccccccCHHH------HhhccccceEEEeecccccccCcCcccccccccchhhhCccccccccc---CCccee-eccc
Confidence            445778899999      9999999999999999999999996      78999999996654332   223233 9999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEEeCCCCCC
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFVKKSDSDS  133 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~~~~~~~~  133 (146)
                      |.|.|.+   .|..|.|.|.+...+.+.|.+....++
T Consensus       209 c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~  245 (288)
T KOG0715|consen  209 CLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRS  245 (288)
T ss_pred             ccccceeccchHHHhhcchhhhhheeEEeecCccccc
Confidence            9999999   699999999999888888886665544

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=98.29  E-value=6.7e-07  Score=79.31  Aligned_cols=64  Identities=28%  Similarity=0.579  Sum_probs=48.7

Q ss_pred             ccCccCcCcee-----eEcCCCCCccEEEEEee---------eCCCCcccceeCCCCCCccEE----eCCCCCCeeEEEe
Q 032147           58 PPCIVCHGTGR-----VDCYNCSGKGRTNKTHL---------TMLPRGEWPKWCKTCSGGGLI----YCSRCLGTGEYRY  119 (146)
Q Consensus        58 ~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~---------~~~g~~~~~~~C~~C~G~G~~----~C~~C~G~G~~~~  119 (146)
                      ..|+.|+|+|+     ..|+.|+|+|++.....         ..-+++....+|+.|.|+|++    .|+.|.|+|.+..
T Consensus         3 ~~C~~C~g~G~i~v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~~   82 (715)
T COG1107           3 KKCPECGGKGKIVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVLT   82 (715)
T ss_pred             ccccccCCCceEeeeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEEe
Confidence            57999999997     67999999999843321         001122346799999999998    9999999998765


Q ss_pred             eE
Q 032147          120 PM  121 (146)
Q Consensus       120 ~~  121 (146)
                      -.
T Consensus        83 c~   84 (715)
T COG1107          83 CD   84 (715)
T ss_pred             ec
Confidence            33

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.13  E-value=4.3e-06  Score=71.11  Aligned_cols=75  Identities=20%  Similarity=0.404  Sum_probs=56.2

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.++....+.   ...|.-..- -.....|+.|+|+|.               .+|+.|+|+|.+
T Consensus       119 l~vtLee~~~G~~~~i~~~~~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  194 (378)
T PRK14278        119 MRLDLEECATGVTKQVTVDTAVLCD---RCHGKGTAG-DSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEV  194 (378)
T ss_pred             EEEEHHHhcCCeEEEEEEEeeccCC---CCcCccCCC-CCCceecCCccCceEEEEEEeccceeEEEEEECCCCCcccee
Confidence            4458999999998888888777433   334432221 123568999999984               579999999998


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      +            ..+|+.|.|+|.+
T Consensus       195 ~------------~~~C~~C~G~g~v  208 (378)
T PRK14278        195 I------------PDPCHECAGDGRV  208 (378)
T ss_pred             e------------CCCCCCCCCceeE
Confidence            6            4679999999986

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.13  E-value=4.1e-06  Score=71.59  Aligned_cols=74  Identities=24%  Similarity=0.499  Sum_probs=56.6

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++......+.+.....   |....|.-... -.....|+.|+|+|.           .+|+.|+|+|.++    
T Consensus       154 ~ltLee~~~G~~~~v~~~~~~~---C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i----  225 (392)
T PRK14279        154 TLDFVEAAKGVTMPLRLTSPAP---CTTCHGSGARP-GTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSII----  225 (392)
T ss_pred             EEEHHHHhCCeEEEEeeecccc---CCCCccccccC-CCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEe----
Confidence            3589999999888888877773   33444443321 124678999999996           5899999999986    


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ..+|..|.|+|.+
T Consensus       226 --------~~~C~~C~G~g~v  238 (392)
T PRK14279        226 --------EDPCEECKGTGVT  238 (392)
T ss_pred             --------CCcCCCCCCCeEE
Confidence                    5679999999987

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=98.12  E-value=2.4e-06  Score=55.60  Aligned_cols=38  Identities=37%  Similarity=0.913  Sum_probs=29.2

Q ss_pred             CcccCccCcCcee---------------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCcc
Q 032147           56 PEPPCIVCHGTGR---------------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGG  104 (146)
Q Consensus        56 ~~~~C~~C~GsG~---------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  104 (146)
                      ....|+.|+|+|.               .+|+.|+|+|.++ .          ..+|+.|+|+|
T Consensus        14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~----------~~~C~~C~G~g   66 (66)
T PF00684_consen   14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E----------KDPCKTCKGSG   66 (66)
T ss_dssp             T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T----------SSB-SSSTTSS
T ss_pred             CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C----------CCCCCCCCCcC
Confidence            5678999999996               7899999999997 2          67899999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.10  E-value=4.5e-06  Score=70.75  Aligned_cols=73  Identities=19%  Similarity=0.441  Sum_probs=55.6

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++.+....+++.....   |....|.-..-  .....|+.|+|+|.           .+|+.|+|+|.++    
T Consensus       121 ~vslee~~~G~~~~i~~~r~~~---C~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----  191 (369)
T PRK14288        121 ELSFKEAVFGCKKTIKVQYQSV---CESCDGTGAKD--KALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKII----  191 (369)
T ss_pred             cccHHHHhCCeEEEEEEEeecc---CCCCCCcccCC--CCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEc----
Confidence            3589999999888888887763   33334433221  24578999999995           5799999999986    


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ..+|+.|.|.|.+
T Consensus       192 --------~~~C~~C~G~g~v  204 (369)
T PRK14288        192 --------KTPCQACKGKTYI  204 (369)
T ss_pred             --------cccCccCCCcceE
Confidence                    4679999999986

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=6.8e-06  Score=69.81  Aligned_cols=74  Identities=20%  Similarity=0.451  Sum_probs=55.7

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.++....+   ....|.-... -.....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       124 ~vtLee~~~G~~~~i~~~r~~~C---~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  199 (376)
T PRK14280        124 TLTFEEAVFGKEKEIEIPKEETC---DTCHGSGAKP-GTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEI  199 (376)
T ss_pred             EEEHHHHhCCceeEEEEeeeccC---CCCCCcccCC-CCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCcee
Confidence            35899999999888888877743   3344433221 124678999999985               4799999999986


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|+.|.|+|.+
T Consensus       200 ------------~~~C~~C~G~g~v  212 (376)
T PRK14280        200 ------------KEKCPTCHGKGKV  212 (376)
T ss_pred             ------------cCCCCCCCCceEE
Confidence                        4679999999986

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=5.6e-06  Score=70.14  Aligned_cols=74  Identities=24%  Similarity=0.525  Sum_probs=55.7

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....++++....   |....|.-..- -.....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       133 ~~slee~~~G~~~~i~~~r~~~---C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~  208 (369)
T PRK14282        133 EVTLSDLINGAEIPVEYDRYET---CPHCGGTGVEP-GSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIP  208 (369)
T ss_pred             EEEHHHhcCCeEEEEEeeeccc---CCCCCccCCCC-CCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeC
Confidence            3589999999888888877763   33444433221 124578999999995               4799999999985


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ...|+.|+|+|.+
T Consensus       209 ------------~~~C~~C~G~g~v  221 (369)
T PRK14282        209 ------------GEYCHECGGSGRI  221 (369)
T ss_pred             ------------CCCCCCCCCceeE
Confidence                        5679999999975

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.08  E-value=6e-06  Score=70.12  Aligned_cols=75  Identities=21%  Similarity=0.368  Sum_probs=56.1

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.+.....+.   ...|.-... -.....|+.|+|+|.               .+|+.|+|+|.+
T Consensus       129 l~ltlee~~~G~~~~i~~~~~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~  204 (372)
T PRK14296        129 IYLTFKELLFGVDKIIELDLLTNCS---KCFGSGAES-NSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI  204 (372)
T ss_pred             eeccHHHhhCCeeEEEEEeeeeccC---CCCCCccCC-CCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee
Confidence            3358999999988888888777433   444433221 123577999999995               379999999998


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      +            ...|+.|+|+|.+
T Consensus       205 ~------------~~~C~~C~G~g~v  218 (372)
T PRK14296        205 I------------KNKCKNCKGKGKY  218 (372)
T ss_pred             e------------cccccCCCCceEE
Confidence            6            5679999999976

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.07  E-value=5.3e-06  Score=70.55  Aligned_cols=75  Identities=23%  Similarity=0.439  Sum_probs=55.9

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.+.....+.   ...|.-... -.....|+.|+|+|.               .+|+.|+|+|.+
T Consensus       121 l~vslee~~~G~~~~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  196 (377)
T PRK14298        121 LYITLEEAAFGVRKDIDVPRAERCS---TCSGTGAKP-GTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV  196 (377)
T ss_pred             EEEEHHHhhCCeEEEEEEEeeccCC---CCCCCcccC-CCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc
Confidence            3358999999988888888777433   334433221 123578999999994               579999999997


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      +            ..+|+.|.|+|.+
T Consensus       197 ~------------~~~C~~C~G~g~v  210 (377)
T PRK14298        197 I------------ESPCPVCSGTGKV  210 (377)
T ss_pred             c------------CCCCCCCCCccEE
Confidence            5            4679999999986

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.07  E-value=6.1e-06  Score=70.07  Aligned_cols=74  Identities=23%  Similarity=0.486  Sum_probs=55.8

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++.+....+.+.....+.   ...|.-... -.....|+.|+|+|.           .+|+.|+|+|.++    
T Consensus       125 ~vtLee~~~G~~k~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----  196 (373)
T PRK14301        125 TVSFRQAAKGDEVTLRIPKNVTCD---DCGGSGAAP-GTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI----  196 (373)
T ss_pred             eccHHHHhCCceEEEEeeecccCC---CCCCcccCC-CCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec----
Confidence            358999999988888887776433   334432221 124578999999995           6899999999986    


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ...|+.|.|+|.+
T Consensus       197 --------~~~C~~C~G~g~v  209 (373)
T PRK14301        197 --------THPCPKCKGSGIV  209 (373)
T ss_pred             --------CCCCCCCCCCcee
Confidence                    4679999999986

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=6.3e-06  Score=69.92  Aligned_cols=74  Identities=23%  Similarity=0.378  Sum_probs=55.6

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++.+....+.+.....+.   ...|.-... -.....|+.|+|+|.           .+|+.|+|+|+++    
T Consensus       126 ~~sLee~~~G~~k~i~~~r~~~C~---~C~G~g~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----  197 (372)
T PRK14300        126 TINLEEAFHGIEKNISFSSEVKCD---TCHGSGSEK-GETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII----  197 (372)
T ss_pred             EEEHHHHhCCceEEEEeeeccccC---CCCCcccCC-CCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe----
Confidence            348999999988888887776433   333432211 124578999999995           5799999999986    


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ..+|+.|.|+|.+
T Consensus       198 --------~~~C~~C~G~g~v  210 (372)
T PRK14300        198 --------KNPCKKCHGMGRY  210 (372)
T ss_pred             --------CCCCCCCCCceEE
Confidence                    4679999999997

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=6.6e-06  Score=69.85  Aligned_cols=75  Identities=24%  Similarity=0.472  Sum_probs=56.5

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...++||++......+.++....+.   ...|.-..- -.....|+.|+|+|.           .+|+.|+|+|.++   
T Consensus       130 l~vtLee~~~G~~k~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~---  202 (372)
T PRK14286        130 LEVSLEDAALGREYKIEIPRLESCV---DCNGSGASK-GSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI---  202 (372)
T ss_pred             EEEEHHHHhCCeeEEEEeeccccCC---CCcCCCcCC-CCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe---
Confidence            4458999999998888888777433   344433221 123578999999995           5799999999986   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ..+|+.|+|+|.+
T Consensus       203 ---------~~~C~~C~G~g~~  215 (372)
T PRK14286        203 ---------SNPCKTCGGQGLQ  215 (372)
T ss_pred             ---------cccCCCCCCCcEE
Confidence                     4679999999997

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=7.9e-06  Score=69.78  Aligned_cols=75  Identities=27%  Similarity=0.495  Sum_probs=56.6

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...++||++......++++....+.   ...|.-..- -.....|+.|+|+|.           .+|+.|+|+|.++   
T Consensus       146 l~lsLee~~~G~~k~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~---  218 (389)
T PRK14295        146 VTLSFTEAIDGATVPLRLTSQAPCP---ACSGTGAKN-GTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIA---  218 (389)
T ss_pred             EEEEHHHHhCCceEEEEeeccccCC---CCcccccCC-CCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEe---
Confidence            3358999999988888888777433   444433221 123578999999995           6899999999986   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ..+|..|.|+|.+
T Consensus       219 ---------~~~C~~C~G~g~~  231 (389)
T PRK14295        219 ---------DDPCLVCKGSGRA  231 (389)
T ss_pred             ---------ccCCCCCCCCceE
Confidence                     4679999999986

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.04  E-value=7e-06  Score=70.08  Aligned_cols=75  Identities=27%  Similarity=0.454  Sum_probs=56.4

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...++||++......++++....   |....|.-.... .....|+.|+|+|.           .+|+.|+|+|.++   
T Consensus       138 l~vslee~~~G~~~~i~~~r~~~---C~~C~G~G~~~~-~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~---  210 (391)
T PRK14284        138 ITLSFEEAAKGVEKELLVSGYKS---CDACSGSGANSS-QGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVI---  210 (391)
T ss_pred             EEEEHHHHhCCeeEEEEEeeecc---CCCCcccccCCC-CCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCccc---
Confidence            34589999999988888887763   334444333211 23578999999996           5899999999975   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ..+|+.|.|+|.+
T Consensus       211 ---------~~~C~~C~G~g~v  223 (391)
T PRK14284        211 ---------TDPCSVCRGQGRI  223 (391)
T ss_pred             ---------CCcCCCCCCccee
Confidence                     4679999999986

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.04  E-value=6.4e-06  Score=70.47  Aligned_cols=73  Identities=25%  Similarity=0.547  Sum_probs=56.3

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.++....|.   ...|.-..-  .....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       144 ~vtLee~~~G~~~~i~~~r~~~C~---~C~G~G~~~--~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  218 (397)
T PRK14281        144 KLTLEEIAKGVEKTLKIKKQVPCK---ECNGTGSKT--GATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV  218 (397)
T ss_pred             EeEHHHHhCCeEEEEEEEeeecCC---CCCCcccCC--CCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee
Confidence            458999999998888888777433   344433221  24678999999994               4799999999986


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|+.|.|.|.+
T Consensus       219 ------------~~~C~~C~G~g~v  231 (397)
T PRK14281        219 ------------KDRCPACYGEGIK  231 (397)
T ss_pred             ------------CCCCCCCCCCccE
Confidence                        4679999999987

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.03  E-value=7.2e-06  Score=69.47  Aligned_cols=75  Identities=21%  Similarity=0.492  Sum_probs=56.2

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...++||++......+.++....   |....|.-.. .-.....|+.|+|+|.           .+|+.|+|+|.++   
T Consensus       126 l~vtlee~~~G~~~~i~~~r~~~---C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~---  198 (365)
T PRK14285        126 IEISLEDAYLGYKNNINITRNML---CESCLGKKSE-KGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII---  198 (365)
T ss_pred             EEEEHHHhhCCeEEEEEeeeccc---CCCCCCcccC-CCCCCccCCCccCceeEEecCceeEEeeecCCCCCccccc---
Confidence            34589999999888888887763   3334444322 1123578999999995           5899999999986   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ..+|..|+|+|.+
T Consensus       199 ---------~~~C~~C~G~g~v  211 (365)
T PRK14285        199 ---------SNPCKSCKGKGSL  211 (365)
T ss_pred             ---------CCCCCCCCCCCEE
Confidence                     5679999999976

>PRK14290 chaperone protein DnaJ; Provisional

Probab=98.03  E-value=7.9e-06  Score=69.15  Aligned_cols=74  Identities=24%  Similarity=0.485  Sum_probs=55.8

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.+.....   |....|.-...  .....|+.|+|+|.               .+|+.|+|+|++
T Consensus       129 l~lsLee~~~G~~~~i~~~r~~~---C~~C~G~g~~~--~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~  203 (365)
T PRK14290        129 LDISLEDAYYGTEKRIKYRRNAM---CPDCSGTGAKN--GKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI  203 (365)
T ss_pred             EEecHHHhcCCEEEEEEeeeccc---CCCCccccCCC--CCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE
Confidence            33589999999888888877763   33344433221  24678999999994               489999999998


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      .            ..+|+.|+|+|.+
T Consensus       204 ~------------~~~C~~C~G~g~v  217 (365)
T PRK14290        204 P------------EEKCPRCNGTGTV  217 (365)
T ss_pred             c------------cCCCCCCCCceeE
Confidence            5            5789999999996

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.02  E-value=9.7e-06  Score=68.62  Aligned_cols=75  Identities=19%  Similarity=0.360  Sum_probs=55.7

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...++||++.+....+.++....+.   ...|.-... -.....|+.|+|+|.           .+|+.|+|+|..+   
T Consensus       124 l~lslee~~~G~~~~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~---  196 (366)
T PRK14294        124 LTLPFLEAAFGTEKEIRIQKLETCE---ECHGSGCEP-GTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVI---  196 (366)
T ss_pred             EEeeHHHhcCCeEEEEEeeecccCC---CCCCccccC-CCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeec---
Confidence            3458999999988888887776333   333432221 123578999999995           5899999999985   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ...|+.|.|+|.+
T Consensus       197 ---------~~~C~~C~G~g~v  209 (366)
T PRK14294        197 ---------VSPCKTCHGQGRV  209 (366)
T ss_pred             ---------CcCCCCCCCceEe
Confidence                     5679999999986

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.01  E-value=8e-06  Score=69.54  Aligned_cols=73  Identities=22%  Similarity=0.510  Sum_probs=55.4

Q ss_pred             cchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEEE
Q 032147           18 NRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTNK   82 (146)
Q Consensus        18 ~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~~   82 (146)
                      .++||++.+....+++.....|..| ..+|...   -.....|+.|+|+|.               .+|+.|+|+|+++ 
T Consensus       136 vsLee~~~G~~~~i~~~r~~~C~~C-~G~G~~~---~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-  210 (386)
T PRK14289        136 LNLKEISTGVEKKFKVKKYVPCSHC-HGTGAEG---NNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKII-  210 (386)
T ss_pred             EEHHHhhCCeEEEEEEEeecccCCC-CCCCCCC---CCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCcccccc-
Confidence            4899999998888888877744433 2233222   134678999999986               3799999999886 


Q ss_pred             EeeeCCCCcccceeCCCCCCccEE
Q 032147           83 THLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        83 ~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                 ...|+.|.|+|.+
T Consensus       211 -----------~~~C~~C~G~g~v  223 (386)
T PRK14289        211 -----------KKKCKKCGGEGIV  223 (386)
T ss_pred             -----------CcCCCCCCCCcEE
Confidence                       4679999999986

>PRK14277 chaperone protein DnaJ; Provisional

Probab=97.96  E-value=1.3e-05  Score=68.29  Aligned_cols=74  Identities=23%  Similarity=0.436  Sum_probs=55.7

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.++....+.   ...|.-... -.....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       136 ~vtLee~~~G~~~~v~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~  211 (386)
T PRK14277        136 ELTFEEAAFGTEKEIEVERFEKCD---VCKGSGAKP-GSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKII  211 (386)
T ss_pred             EEEHHHHhCCeEEEEEEEeeccCC---CCCCCCcCC-CCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeec
Confidence            358999999988888888777433   334433221 123578999999985               4799999999986


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|..|+|+|.+
T Consensus       212 ------------~~~C~~C~G~g~v  224 (386)
T PRK14277        212 ------------TDPCNKCGGTGRI  224 (386)
T ss_pred             ------------cCCCCCCCCCcEE
Confidence                        4679999999987

>PRK14276 chaperone protein DnaJ; Provisional

Probab=97.96  E-value=1.1e-05  Score=68.61  Aligned_cols=75  Identities=25%  Similarity=0.429  Sum_probs=55.1

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.+.....+.   ...|.-..- -.....|+.|+|+|.               .+|+.|+|+|.+
T Consensus       126 l~vtLee~~~G~~~~i~~~~~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~  201 (380)
T PRK14276        126 VNLDFEEAIFGKEKEVSYNREATCH---TCNGSGAKP-GTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE  201 (380)
T ss_pred             EEEEHHHhcCCeEEEEEeeccccCC---CCcCcccCC-CCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc
Confidence            3458999999988888887766433   333432211 123578999999985               479999999998


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      +            ..+|+.|.|+|.+
T Consensus       202 ~------------~~~C~~C~G~g~~  215 (380)
T PRK14276        202 I------------KEPCQTCHGTGHE  215 (380)
T ss_pred             c------------cCCCCCCCCceEE
Confidence            6            4679999999986

>PRK10767 chaperone protein DnaJ; Provisional

Probab=97.94  E-value=1.4e-05  Score=67.60  Aligned_cols=74  Identities=22%  Similarity=0.480  Sum_probs=55.5

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++.+....+.+.....+   ....|.-... -.....|+.|+|+|.           .+|+.|+|+|..+    
T Consensus       123 ~vsLee~~~G~~~~v~~~r~~~C---~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----  194 (371)
T PRK10767        123 EITLEEAVRGVTKEIRIPTLVTC---DTCHGSGAKP-GTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKII----  194 (371)
T ss_pred             EeehHHhhCCeeEEEeeeecccC---CCCCCcccCC-CCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeEC----
Confidence            35899999998888888877633   3344433221 123568999999996           4699999999985    


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ...|+.|.|+|.+
T Consensus       195 --------~~~C~~C~G~g~v  207 (371)
T PRK10767        195 --------KDPCKKCHGQGRV  207 (371)
T ss_pred             --------CCCCCCCCCCceE
Confidence                    4679999999987

>PRK14297 chaperone protein DnaJ; Provisional

Probab=97.94  E-value=1.7e-05  Score=67.46  Aligned_cols=75  Identities=21%  Similarity=0.428  Sum_probs=55.7

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEE
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRT   80 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~   80 (146)
                      ...++||++.+....+.+.....+.   ...|.-... -.....|+.|+|+|.               .+|+.|+|+|.+
T Consensus       128 l~vsLee~~~G~~~~i~~~r~~~C~---~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~  203 (380)
T PRK14297        128 INLTFEEAVFGVEKEISVTRNENCE---TCNGTGAKP-GTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV  203 (380)
T ss_pred             EEEEHHHhcCCeEEEEEeeeeccCC---CcccccccC-CCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE
Confidence            3458999999988888888777433   344433221 123578999999984               479999999998


Q ss_pred             EEEeeeCCCCcccceeCCCCCCccEE
Q 032147           81 NKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        81 ~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      +            ...|..|.|.|.+
T Consensus       204 ~------------~~~C~~C~G~g~v  217 (380)
T PRK14297        204 I------------EDPCNKCHGKGKV  217 (380)
T ss_pred             c------------CCCCCCCCCCeEE
Confidence            6            4679999999965

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=97.93  E-value=1.6e-05  Score=66.85  Aligned_cols=74  Identities=23%  Similarity=0.456  Sum_probs=54.8

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.+.....   |....|.-... -.....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       124 ~vsLee~~~G~~~~i~~~r~~~---C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  199 (354)
T TIGR02349       124 ELTFEEAVFGVEKEIEIPRKES---CETCHGTGAKP-GTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKII  199 (354)
T ss_pred             EEEHHHHhCCeeEEEEeecCCc---CCCCCCCCCCC-CCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceec
Confidence            3589999999888888876663   33333432211 123678999999984               5799999999986


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ...|+.|.|+|.+
T Consensus       200 ------------~~~C~~C~G~g~v  212 (354)
T TIGR02349       200 ------------KEPCSTCKGKGRV  212 (354)
T ss_pred             ------------CCCCCCCCCCcEe
Confidence                        4579999999986

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=97.93  E-value=1.4e-05  Score=69.11  Aligned_cols=81  Identities=23%  Similarity=0.425  Sum_probs=59.4

Q ss_pred             CCcee--eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCC
Q 032147           11 TPSTV--VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYN   73 (146)
Q Consensus        11 ~ps~~--~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~   73 (146)
                      ++...  ...++||++.+....+.+.....   |....|.-..  -.....|+.|+|+|.               .+|+.
T Consensus       123 g~di~~~l~vtLee~~~G~~~~i~~~r~~~---C~~C~G~G~~--~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~  197 (421)
T PTZ00037        123 GEDIVSHLKVTLEQIYNGAMRKLAINKDVI---CANCEGHGGP--KDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNS  197 (421)
T ss_pred             CCCEEEEeeeeHHHHhCCCceEEEeecccc---ccccCCCCCC--CCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCC
Confidence            44443  34589999999888888877663   3344444322  124678999999994               48999


Q ss_pred             CCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           74 CSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        74 C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      |+|+|.++..          ..+|+.|+|+|.+
T Consensus       198 C~G~G~~i~~----------~~~C~~C~G~g~v  220 (421)
T PTZ00037        198 CNGQGKIIPE----------SKKCKNCSGKGVK  220 (421)
T ss_pred             CCCcceeccc----------cccCCcCCCccee
Confidence            9999998742          4789999999987

>PRK14287 chaperone protein DnaJ; Provisional

Probab=97.92  E-value=1.5e-05  Score=67.67  Aligned_cols=74  Identities=19%  Similarity=0.424  Sum_probs=56.1

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.+.....   |....|.-.. .-.....|+.|+|+|.               .+|+.|+|+|.++
T Consensus       119 ~vslee~~~G~~~~i~~~r~~~---C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~  194 (371)
T PRK14287        119 TLEFKEAVFGKETEIEIPREET---CGTCHGSGAK-PGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKII  194 (371)
T ss_pred             EEEHHHhcCCeEEEEEEeeecc---CCCCCCcccC-CCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccc
Confidence            3589999999888888887773   3344444322 1234678999999995               5799999999985


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ...|+.|.|.|.+
T Consensus       195 ------------~~~C~~C~G~g~v  207 (371)
T PRK14287        195 ------------KQKCATCGGKGKV  207 (371)
T ss_pred             ------------cccCCCCCCeeEE
Confidence                        4679999999976

>PRK14292 chaperone protein DnaJ; Provisional

Probab=97.89  E-value=1.8e-05  Score=66.99  Aligned_cols=75  Identities=24%  Similarity=0.487  Sum_probs=56.1

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.+.....   |....|.-..........|..|+|+|.               .+|+.|+|+|...
T Consensus       120 ~~sLee~~~G~~~~v~~~r~~~---C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  196 (371)
T PRK14292        120 RITLEQARAGEEVEVEVDRLTE---CEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQII  196 (371)
T ss_pred             eccHHHHcCCeEEEEEEEeeec---CCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceec
Confidence            3589999998888888876663   334445443322223678999999995               3699999999975


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ...|+.|.|+|.+
T Consensus       197 ------------~~~C~~C~G~g~v  209 (371)
T PRK14292        197 ------------TDPCTVCRGRGRT  209 (371)
T ss_pred             ------------CCCCCCCCCceEE
Confidence                        5789999999976

>PRK14293 chaperone protein DnaJ; Provisional

Probab=97.81  E-value=2.9e-05  Score=65.87  Aligned_cols=74  Identities=18%  Similarity=0.434  Sum_probs=55.3

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.+....++..| ...|....   .....|+.|+|+|.               .+|+.|+|+|+++
T Consensus       124 ~vsLee~~~G~~k~i~~~r~~~C~~C-~G~G~~~~---~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  199 (374)
T PRK14293        124 KLDFREAIFGGEKEIRIPHLETCETC-RGSGAKPG---TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVI  199 (374)
T ss_pred             EeeHHHHhCCceEEEEeeccccCCCC-CCcCCCCC---CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEe
Confidence            35899999998888888777644433 23333221   23568999999995               4799999999985


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|..|.|+|.+
T Consensus       200 ------------~~~C~~C~G~g~v  212 (374)
T PRK14293        200 ------------EDPCDACGGQGVK  212 (374)
T ss_pred             ------------ccCCCCCCCCccc
Confidence                        4679999999986

>PRK14283 chaperone protein DnaJ; Provisional

Probab=97.77  E-value=3.5e-05  Score=65.49  Aligned_cols=74  Identities=23%  Similarity=0.519  Sum_probs=55.3

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcCCCCCccEEE
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCYNCSGKGRTN   81 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~~C~G~G~~~   81 (146)
                      ..++||++.+....+.+.....   |....|.-..- -.....|+.|+|+|.               .+|+.|+|+|..+
T Consensus       127 ~vsLed~~~G~~~~i~~~r~~~---C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  202 (378)
T PRK14283        127 EITLEEAASGVEKDIKVRHTKK---CPVCNGSRAEP-GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIV  202 (378)
T ss_pred             eeeHHHHhCCcceEEEeeeecc---CCCCCccccCC-CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceec
Confidence            3489999999888888887763   33344433221 124678999999985               4799999999985


Q ss_pred             EEeeeCCCCcccceeCCCCCCccEE
Q 032147           82 KTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        82 ~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                                  ..+|..|.|+|.+
T Consensus       203 ------------~~~C~~C~G~g~v  215 (378)
T PRK14283        203 ------------EKPCSNCHGKGVV  215 (378)
T ss_pred             ------------CCCCCCCCCceee
Confidence                        4679999999986

>PRK14291 chaperone protein DnaJ; Provisional

Probab=97.75  E-value=5.2e-05  Score=64.55  Aligned_cols=73  Identities=25%  Similarity=0.499  Sum_probs=53.4

Q ss_pred             ecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEee
Q 032147           17 RNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHL   85 (146)
Q Consensus        17 ~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~   85 (146)
                      ..++||++.+....+.+.....   |....|.-... -.....|+.|+|+|.           .+|+.|+|+|.+     
T Consensus       137 ~vsLee~~~G~~~~i~~~r~~~---C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----  207 (382)
T PRK14291        137 EISLEEAYTGTTVSLEVPRYVP---CEACGGTGYDP-GSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----  207 (382)
T ss_pred             EEEHHHhhCCEEEEEEEeeecc---CCCCccccCCC-CCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----
Confidence            3489999999888888876663   33334432221 124678999999995           589999999952     


Q ss_pred             eCCCCcccceeCCCCCCccEE
Q 032147           86 TMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        86 ~~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ...|..|+|.|.+
T Consensus       208 --------~~~C~~C~G~g~v  220 (382)
T PRK14291        208 --------REPCSKCNGRGLV  220 (382)
T ss_pred             --------ccCCCCCCCCceE
Confidence                    3579999999986

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=97.62  E-value=8.2e-05  Score=57.85  Aligned_cols=38  Identities=32%  Similarity=0.597  Sum_probs=30.6

Q ss_pred             ceeCCCCCCccEE-----eCCCCCCeeEEEeeEEEEEEeCCCC
Q 032147           94 PKWCKTCSGGGLI-----YCSRCLGTGEYRYPMGFHFVKKSDS  131 (146)
Q Consensus        94 ~~~C~~C~G~G~~-----~C~~C~G~G~~~~~~~~~v~~~~~~  131 (146)
                      +.+|+.|+|+|++     +|+.|+|+|+++.+++..++..+.|
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~~g~~  141 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKSFGVD  141 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEeeecc
Confidence            5677777777776     5999999999999999998875543

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.42  E-value=0.00012  Score=65.34  Aligned_cols=45  Identities=42%  Similarity=0.963  Sum_probs=36.7

Q ss_pred             CcccCccCcCcee------------------------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE-eCCC
Q 032147           56 PEPPCIVCHGTGR------------------------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI-YCSR  110 (146)
Q Consensus        56 ~~~~C~~C~GsG~------------------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~-~C~~  110 (146)
                      ....|+.|+|+|.                        .+|+.|.|+|.+..           ..+|+.|.|+|++ .|..
T Consensus        17 ~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v-----------~~~c~~c~G~gkv~~c~~   85 (715)
T COG1107          17 GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV-----------YDTCPECGGTGKVLTCDI   85 (715)
T ss_pred             eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE-----------EeecccCCCceeEEeecc
Confidence            4677999999884                        58999999999875           4679999999998 7777


Q ss_pred             C
Q 032147          111 C  111 (146)
Q Consensus       111 C  111 (146)
                      |
T Consensus        86 c   86 (715)
T COG1107          86 C   86 (715)
T ss_pred             c
Confidence            7

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=97.01  E-value=0.0008  Score=48.31  Aligned_cols=33  Identities=42%  Similarity=1.071  Sum_probs=23.6

Q ss_pred             cCccCcCcee------------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           59 PCIVCHGTGR------------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        59 ~C~~C~GsG~------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      .|+.|+|+|.            .+|+.|+|+|..               .|+.|.|+|.+
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---------------~C~~C~G~G~~   98 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---------------TCTTCQGSGIQ   98 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---------------eCCCCCCCEEE
Confidence            6888888774            467777777752               28888888776

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.72  E-value=0.00099  Score=51.86  Aligned_cols=25  Identities=40%  Similarity=0.901  Sum_probs=11.6

Q ss_pred             cccCccCcCcee-----eEcCCCCCccEEE
Q 032147           57 EPPCIVCHGTGR-----VDCYNCSGKGRTN   81 (146)
Q Consensus        57 ~~~C~~C~GsG~-----~~C~~C~G~G~~~   81 (146)
                      ...|+.|+|+|.     .+|+.|+|+|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~  128 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFR  128 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEe
Confidence            344555555553     1255555554443

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=96.59  E-value=0.0013  Score=55.37  Aligned_cols=81  Identities=26%  Similarity=0.445  Sum_probs=58.9

Q ss_pred             CCceeeec--chhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee----------------eEcC
Q 032147           11 TPSTVVRN--RIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR----------------VDCY   72 (146)
Q Consensus        11 ~ps~~~~~--~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~----------------~~C~   72 (146)
                      +++++...  ++||++.+...++.++..--+..+...-|.+.     ....|..|.|+|.                ..|.
T Consensus       100 g~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg-----~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~  174 (337)
T KOG0712|consen  100 GKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSG-----SAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCD  174 (337)
T ss_pred             CCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCC-----CCCCCCCCCCCCceeEEEeccccccccceeEec
Confidence            77776554  79999999888888886662222222222221     2447999999994                7899


Q ss_pred             CCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           73 NCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        73 ~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      .|+|+|..+..          ...|+.|.|++++
T Consensus       175 ~C~G~G~~~~~----------kd~C~~C~G~~~v  198 (337)
T KOG0712|consen  175 SCNGSGETISL----------KDRCKTCSGAKVV  198 (337)
T ss_pred             cCCCccccccc----------cccCcccccchhh
Confidence            99999997432          6889999999997

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.36  E-value=0.0015  Score=54.86  Aligned_cols=34  Identities=38%  Similarity=0.720  Sum_probs=22.0

Q ss_pred             eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           69 VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        69 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      ..|..|+|+|......    +......+|.+|.|+|.+
T Consensus       235 ~~C~~C~G~G~~~C~t----C~grG~k~C~TC~gtgsl  268 (406)
T KOG2813|consen  235 DLCYMCHGRGIKECHT----CKGRGKKPCTTCSGTGSL  268 (406)
T ss_pred             chhhhccCCCcccCCc----ccCCCCcccccccCccce
Confidence            4466666666654322    333346789999999997

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=96.11  E-value=0.011  Score=48.64  Aligned_cols=53  Identities=25%  Similarity=0.582  Sum_probs=43.5

Q ss_pred             CcccCccCcCceeeEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEEeCCCCC
Q 032147           56 PEPPCIVCHGTGRVDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLIYCSRCL  112 (146)
Q Consensus        56 ~~~~C~~C~GsG~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~C~~C~  112 (146)
                      ....|..|.|.+..+|..|+|+=.+....    .......+|+.|+=-|-+.|+.|.
T Consensus       228 ~~~~C~~CGg~rFlpC~~C~GS~kv~~~~----~~~~~~~rC~~CNENGLvrCp~Cs  280 (281)
T KOG2824|consen  228 GGGVCESCGGARFLPCSNCHGSCKVHEEE----EDDGGVLRCLECNENGLVRCPVCS  280 (281)
T ss_pred             CCCcCCCcCCcceEecCCCCCceeeeeec----cCCCcEEECcccCCCCceeCCccC
Confidence            34789999999999999999999987631    122346899999999999999995

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=94.17  E-value=0.07  Score=39.96  Aligned_cols=27  Identities=26%  Similarity=0.541  Sum_probs=23.8

Q ss_pred             cccCccCcCceeeEcCCCCCccEEEEE
Q 032147           57 EPPCIVCHGTGRVDCYNCSGKGRTNKT   83 (146)
Q Consensus        57 ~~~C~~C~GsG~~~C~~C~G~G~~~~~   83 (146)
                      ...|..|.|.+..+|..|+|+=.+...
T Consensus        99 ~~~C~~Cgg~rfv~C~~C~Gs~k~~~~  125 (147)
T cd03031          99 GGVCEGCGGARFVPCSECNGSCKVFAE  125 (147)
T ss_pred             CCCCCCCCCcCeEECCCCCCcceEEec
Confidence            457999999999999999999998754

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=91.14  E-value=0.23  Score=37.15  Aligned_cols=24  Identities=29%  Similarity=0.743  Sum_probs=14.4

Q ss_pred             eeCCCCCCccEEeCCCCCCeeEEE
Q 032147           95 KWCKTCSGGGLIYCSRCLGTGEYR  118 (146)
Q Consensus        95 ~~C~~C~G~G~~~C~~C~G~G~~~  118 (146)
                      ..|..|.|.+.++|..|+|+-.+.
T Consensus       100 ~~C~~Cgg~rfv~C~~C~Gs~k~~  123 (147)
T cd03031         100 GVCEGCGGARFVPCSECNGSCKVF  123 (147)
T ss_pred             CCCCCCCCcCeEECCCCCCcceEE
Confidence            346666666666666666665553

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=90.35  E-value=0.16  Score=41.93  Aligned_cols=73  Identities=21%  Similarity=0.436  Sum_probs=51.7

Q ss_pred             cchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEeee
Q 032147           18 NRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHLT   86 (146)
Q Consensus        18 ~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~~   86 (146)
                      ..|++.+......+.+.+.+.+.   ...|.. .........|..|.|+|.           .+|..|+|.|.+..    
T Consensus       146 ~~f~~A~~g~~~~~~~~~~~~~~---t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~----  217 (288)
T KOG0715|consen  146 LDFKEAVRGSKKRISFNVLSDCE---TCFGSG-AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR----  217 (288)
T ss_pred             cCHHHHhhccccceEEEeecccc---cccCcC-cccccccccchhhhCcccccccccCCcceeecccccccceecc----
Confidence            35667776666677777777332   333333 233456889999999992           45999999999873    


Q ss_pred             CCCCcccceeCCCCCCccEE
Q 032147           87 MLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        87 ~~g~~~~~~~C~~C~G~G~~  106 (146)
                              ..|..|.|.|.+
T Consensus       218 --------~~c~~~~g~~~v  229 (288)
T KOG0715|consen  218 --------DNCQACSGAGQV  229 (288)
T ss_pred             --------chHHHhhcchhh
Confidence                    339999999976

>TIGR00630 uvra excinuclease ABC, A subunit

Probab=90.17  E-value=0.079  Score=50.20  Aligned_cols=32  Identities=28%  Similarity=0.700  Sum_probs=24.2

Q ss_pred             eeCCCCCCccEE------------eCCCCCCeeEEEeeEEEEEE
Q 032147           95 KWCKTCSGGGLI------------YCSRCLGTGEYRYPMGFHFV  126 (146)
Q Consensus        95 ~~C~~C~G~G~~------------~C~~C~G~G~~~~~~~~~v~  126 (146)
                      -.|+.|.|.|.+            +|+.|+|+.+..+...++++
T Consensus       737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~  780 (924)
T TIGR00630       737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYK  780 (924)
T ss_pred             CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeC
Confidence            447777777776            89999999988876555554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=89.24  E-value=0.43  Score=39.31  Aligned_cols=23  Identities=30%  Similarity=0.761  Sum_probs=13.2

Q ss_pred             CCCCCCccEE-----------eCCCCCCeeEEEe
Q 032147           97 CKTCSGGGLI-----------YCSRCLGTGEYRY  119 (146)
Q Consensus        97 C~~C~G~G~~-----------~C~~C~G~G~~~~  119 (146)
                      |..|+|+-++           .|..|+-.|.++.
T Consensus       243 C~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvrC  276 (281)
T KOG2824|consen  243 CSNCHGSCKVHEEEEDDGGVLRCLECNENGLVRC  276 (281)
T ss_pred             cCCCCCceeeeeeccCCCcEEECcccCCCCceeC
Confidence            5666665443           5666666666553

>TIGR00630 uvra excinuclease ABC, A subunit

Probab=89.13  E-value=0.33  Score=46.11  Aligned_cols=33  Identities=21%  Similarity=0.364  Sum_probs=25.1

Q ss_pred             EcCCCCCccEEEEEeeeCCCCc-ccceeCCCCCCccEE
Q 032147           70 DCYNCSGKGRTNKTHLTMLPRG-EWPKWCKTCSGGGLI  106 (146)
Q Consensus        70 ~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~C~G~G~~  106 (146)
                      .|+.|.|.|++....    .++ ....+|+.|+|+...
T Consensus       738 ~C~~C~G~G~~~~~~----~f~~~~~~~C~~C~G~R~~  771 (924)
T TIGR00630       738 RCEACQGDGVIKIEM----HFLPDVYVPCEVCKGKRYN  771 (924)
T ss_pred             CCCCCccceEEEEEc----cCCCCcccCCCCcCCceeC
Confidence            489999999988654    333 357899999999765

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]

Probab=88.15  E-value=0.32  Score=45.71  Aligned_cols=36  Identities=28%  Similarity=0.617  Sum_probs=25.4

Q ss_pred             eeCCCCCCccEE------------eCCCCCCeeEEEeeEEEEEEeCCC
Q 032147           95 KWCKTCSGGGLI------------YCSRCLGTGEYRYPMGFHFVKKSD  130 (146)
Q Consensus        95 ~~C~~C~G~G~~------------~C~~C~G~G~~~~~~~~~v~~~~~  130 (146)
                      -+|..|.|.|.+            +|+.|+|+-+-+++-++..+=+++
T Consensus       731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~EtLev~ykGK~I  778 (935)
T COG0178         731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKGKNI  778 (935)
T ss_pred             cCCccccCCceEEEEeccCCCceeeCCCcCCcccccceEEEEECCccH
Confidence            467888887776            899999988877665555554333

>PRK00349 uvrA excinuclease ABC subunit A; Reviewed

Probab=87.60  E-value=0.37  Score=45.86  Aligned_cols=37  Identities=27%  Similarity=0.611  Sum_probs=26.7

Q ss_pred             eeCCCCCCccEE------------eCCCCCCeeEEEeeEEEEEEeCCCC
Q 032147           95 KWCKTCSGGGLI------------YCSRCLGTGEYRYPMGFHFVKKSDS  131 (146)
Q Consensus        95 ~~C~~C~G~G~~------------~C~~C~G~G~~~~~~~~~v~~~~~~  131 (146)
                      -.|+.|.|.|.+            +|+.|+|+.+..+...+++.=.+..
T Consensus       739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~  787 (943)
T PRK00349        739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIA  787 (943)
T ss_pred             CCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHH
Confidence            357777777776            8999999999887766665533433

>PRK00349 uvrA excinuclease ABC subunit A; Reviewed

Probab=84.05  E-value=0.85  Score=43.49  Aligned_cols=33  Identities=21%  Similarity=0.357  Sum_probs=25.0

Q ss_pred             EcCCCCCccEEEEEeeeCCCCc-ccceeCCCCCCccEE
Q 032147           70 DCYNCSGKGRTNKTHLTMLPRG-EWPKWCKTCSGGGLI  106 (146)
Q Consensus        70 ~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~C~G~G~~  106 (146)
                      .|+.|.|.|.+....    .++ ....+|+.|+|+...
T Consensus       740 ~C~~C~G~G~~~~~~----~f~~~~~~~C~~C~G~R~~  773 (943)
T PRK00349        740 RCEACQGDGVIKIEM----HFLPDVYVPCDVCKGKRYN  773 (943)
T ss_pred             CCCcccccceEEEEe----ccCCCccccCccccCcccc
Confidence            499999999988654    233 346799999999775

>PRK00635 excinuclease ABC subunit A; Provisional

Probab=82.97  E-value=0.27  Score=49.58  Aligned_cols=33  Identities=21%  Similarity=0.391  Sum_probs=23.9

Q ss_pred             ceeCCCCCCccEE------------eCCCCCCeeEEEeeEEEEEE
Q 032147           94 PKWCKTCSGGGLI------------YCSRCLGTGEYRYPMGFHFV  126 (146)
Q Consensus        94 ~~~C~~C~G~G~~------------~C~~C~G~G~~~~~~~~~v~  126 (146)
                      .-.|+.|.|.|.+            +|+.|+|+.+..+..+++.+
T Consensus      1607 ~GrC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~L~v~~~ 1651 (1809)
T PRK00635       1607 QGQCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVVYE 1651 (1809)
T ss_pred             CCCCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHHHhheeC
Confidence            3458888888876            79999999887766444443

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=81.21  E-value=0.58  Score=37.83  Aligned_cols=23  Identities=26%  Similarity=0.498  Sum_probs=10.1

Q ss_pred             eCCCCCCccEEeCCCCCCeeEEE
Q 032147           96 WCKTCSGGGLIYCSRCLGTGEYR  118 (146)
Q Consensus        96 ~C~~C~G~G~~~C~~C~G~G~~~  118 (146)
                      ++-.-.|++.++|++|+|+|.+.
T Consensus        29 py~e~~g~~~vtCPTCqGtGrIP   51 (238)
T PF07092_consen   29 PYVEFTGRDSVTCPTCQGTGRIP   51 (238)
T ss_pred             ccccccCCCCCcCCCCcCCccCC
Confidence            34444444444444444444443

The function of this family is unknown.

>PRK00635 excinuclease ABC subunit A; Provisional

Probab=81.12  E-value=1.2  Score=45.29  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=23.9

Q ss_pred             EcCCCCCccEEEEEeeeCCCCc-ccceeCCCCCCccEE
Q 032147           70 DCYNCSGKGRTNKTHLTMLPRG-EWPKWCKTCSGGGLI  106 (146)
Q Consensus        70 ~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~C~G~G~~  106 (146)
                      .|+.|.|.|++....    .|+ -...+|+.|+|+.+.
T Consensus      1609 rC~~C~G~G~i~i~m----~fl~dv~~~C~~C~G~R~~ 1642 (1809)
T PRK00635       1609 QCSDCWGLGYQWIDR----AFYALEKRPCPTCSGFRIQ 1642 (1809)
T ss_pred             CCCCCccCceEEEec----ccCCCcccCCCCCCCcCCC
Confidence            388888888887654    233 357889999998653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.83
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.78
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.57
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	98.45
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	98.12
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	98.06
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	98.01
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.5
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.41
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.32
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.07
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	95.58
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	91.88

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4.4e-22  Score=139.51  Aligned_cols=91  Identities=24%  Similarity=0.436  Sum_probs=83.2

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKT   99 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~   99 (146)
                      +.+++|+|+|+|      +|+|.+++|.+.+.+.|+.|+|+|+      .+|+.|+|+|++...+    |+|+++++|+.
T Consensus         3 ~~~~~l~vslee------~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~   72 (104)
T 2ctt_A            3 SGSSGMELTFNQ------AAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRR   72 (104)
T ss_dssp             CCCCCCCCCCSS------CCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSS
T ss_pred             ceEEEEEEEHHH------HcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCc
Confidence            467889999999      9999999999999999999999995      7899999999987654    67888899999


Q ss_pred             CCCccEE---eCCCCCCeeEEEeeEEEEEE
Q 032147          100 CSGGGLI---YCSRCLGTGEYRYPMGFHFV  126 (146)
Q Consensus       100 C~G~G~~---~C~~C~G~G~~~~~~~~~v~  126 (146)
                      |+|+|++   +|+.|+|.|++++++.|+|+
T Consensus        73 C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~  102 (104)
T 2ctt_A           73 CGGRGSIIISPCVVCRGAGQAKQKKRSGPS  102 (104)
T ss_dssp             SSSSSEECSSCCSSSSSCSEECCCCSSCCS
T ss_pred             CCCcceECCCcCCCCCCeeEEEEEEEEEEE
Confidence            9999999   99999999999998888775

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.78  E-value=1.4e-19  Score=144.20  Aligned_cols=97  Identities=21%  Similarity=0.301  Sum_probs=88.0

Q ss_pred             ccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCc-ccceeCC
Q 032147           25 KSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRG-EWPKWCK   98 (146)
Q Consensus        25 ~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~   98 (146)
                      .|+.++|.|+|+|      +|+|.++++.+.+...|+.|+|+|+     .+|+.|+|+|++...+++++ |+ +++++|+
T Consensus        12 ~d~~~~l~vslee------~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~   84 (248)
T 1nlt_A           12 KDIKHEISASLEE------LYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECD   84 (248)
T ss_dssp             CCEEEEEEECTTH------HHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCT
T ss_pred             CCEEEEEEecHHH------hcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCC
Confidence            3567899999999      9999999999999999999999996     78999999999988887776 44 6789999


Q ss_pred             CCCCccEE-----eCCCCCCeeEEEeeEEEEEEeC
Q 032147           99 TCSGGGLI-----YCSRCLGTGEYRYPMGFHFVKK  128 (146)
Q Consensus        99 ~C~G~G~~-----~C~~C~G~G~~~~~~~~~v~~~  128 (146)
                      .|+|+|++     +|+.|+|.|++++.+.++|+..
T Consensus        85 ~C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip  119 (248)
T 1nlt_A           85 VCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVE  119 (248)
T ss_dssp             TCSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEEC
T ss_pred             CCCCcCEEeccCCCCcccCCCceEeeeEEEEEEEC
Confidence            99999976     8999999999999999999943

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.57  E-value=8.7e-16  Score=101.93  Aligned_cols=69  Identities=30%  Similarity=0.636  Sum_probs=60.6

Q ss_pred             CeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE---eCCCCCCeeEE
Q 032147           47 NVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI---YCSRCLGTGEY  117 (146)
Q Consensus        47 G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~---~C~~C~G~G~~  117 (146)
                      |.+++|.+.+...|+.|+|+|.      .+|+.|+|+|.++..+    |+|+++.+|+.|+|+|++   +|+.|+|.|++
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~   76 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence            4456677889999999999996      6899999999987644    778888999999999999   99999999998


Q ss_pred             Ee
Q 032147          118 RY  119 (146)
Q Consensus       118 ~~  119 (146)
                      ++
T Consensus        77 ~~   78 (79)
T 1exk_A           77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ee
Confidence            64

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=3.3e-08  Score=68.53  Aligned_cols=75  Identities=17%  Similarity=0.384  Sum_probs=55.6

Q ss_pred             eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee-----------eEcCCCCCccEEEEEe
Q 032147           16 VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        16 ~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~   84 (146)
                      ...+|||++......|.+.....   +....|.-.. .-.....|+.|+|+|.           .+|+.|+|+|.++   
T Consensus         8 l~vslee~~~G~~~~i~~~~~~~---C~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i---   80 (104)
T 2ctt_A            8 MELTFNQAAKGVNKEFTVNIMDT---CERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII---   80 (104)
T ss_dssp             CCCCCSSCCSSSCTTCCSSCCEE---CSSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC---
T ss_pred             EEEEHHHHcCCCEEEEEeeeeeE---CCCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC---
Confidence            34589999999888888877663   3333343211 0123578999999995           5899999999876   


Q ss_pred             eeCCCCcccceeCCCCCCccEE
Q 032147           85 LTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        85 ~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                               ..+|+.|+|.|++
T Consensus        81 ---------~~~C~~C~G~G~v   93 (104)
T 2ctt_A           81 ---------ISPCVVCRGAGQA   93 (104)
T ss_dssp             ---------SSCCSSSSSCSEE
T ss_pred             ---------CCcCCCCCCeeEE
Confidence                     5789999999987

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=98.12  E-value=1.7e-06  Score=56.65  Aligned_cols=39  Identities=33%  Similarity=0.893  Sum_probs=29.9

Q ss_pred             CcccCccCcCcee-----------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           56 PEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        56 ~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      ....|+.|+|+|.           .+|+.|+|+|.++            ..+|+.|+|.|++
T Consensus        27 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~------------~~~C~~C~G~G~~   76 (79)
T 1exk_A           27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI------------KDPCNKCHGHGRV   76 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC------------SSBCGGGTTSSEE
T ss_pred             cCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC------------CCcCCCCCCeEEE
Confidence            3467888888885           2788888888764            4678888888875

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=98.06  E-value=1.2e-06  Score=69.31  Aligned_cols=82  Identities=21%  Similarity=0.371  Sum_probs=58.9

Q ss_pred             CCCcee--eecchhhhcccceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------------eEcC
Q 032147           10 ATPSTV--VRNRIEDESKSNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------------VDCY   72 (146)
Q Consensus        10 ~~ps~~--~~~~~ed~~~~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------------~~C~   72 (146)
                      .++...  ...+|||++......++++-...+..| .-+|.+.    .....|+.|+|+|.               .+|+
T Consensus        10 ~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C-~G~G~~~----g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~   84 (248)
T 1nlt_A           10 RGKDIKHEISASLEELYKGRTAKLALNKQILCKEC-EGRGGKK----GAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECD   84 (248)
T ss_dssp             BCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTT-TTCSBST----TTCCCCTTSSSSSCEEEEEESSSEEEEEECSCT
T ss_pred             CCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCC-cCccCCC----CCCccCCCCCCCcEEEEEEecCceEEEEEEcCC
Confidence            344443  445899999999999999877744333 1233322    12478999999984               4799


Q ss_pred             CCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           73 NCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        73 ~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      .|+|+|.++.          ...+|+.|+|+|.+
T Consensus        85 ~C~G~G~~i~----------~~~~C~~C~G~g~~  108 (248)
T 1nlt_A           85 VCHGTGDIID----------PKDRCKSCNGKKVE  108 (248)
T ss_dssp             TCSSSSSCCC----------TTSBCSSSTTSCEE
T ss_pred             CCCCcCEEec----------cCCCCcccCCCceE
Confidence            9999998752          26789999999986

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=98.01  E-value=2.6e-06  Score=52.60  Aligned_cols=30  Identities=30%  Similarity=0.706  Sum_probs=25.9

Q ss_pred             ccceeCCCCCCccEE---eCCCCCCeeEEEeeE
Q 032147           92 EWPKWCKTCSGGGLI---YCSRCLGTGEYRYPM  121 (146)
Q Consensus        92 ~~~~~C~~C~G~G~~---~C~~C~G~G~~~~~~  121 (146)
                      +++++|+.|+|+|.+   +|+.|+|.|++++.+
T Consensus         7 q~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~~   39 (53)
T 3lcz_A            7 DLETTCPNCNGSGREEPEPCPKCLGKGVILTAQ   39 (53)
T ss_dssp             HHEEECTTTTTSCEETTEECTTTTTSSEEECHH
T ss_pred             ceeccCcCCcccccCCCCcCCCCCCcEEEEEEe
Confidence            357899999999998   999999999987654

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.50  E-value=7.3e-05  Score=45.96  Aligned_cols=26  Identities=31%  Similarity=0.621  Sum_probs=17.8

Q ss_pred             ceeCCCCCCccEE---eCCCCCCeeEEEe
Q 032147           94 PKWCKTCSGGGLI---YCSRCLGTGEYRY  119 (146)
Q Consensus        94 ~~~C~~C~G~G~~---~C~~C~G~G~~~~  119 (146)
                      +.+|+.|+|+|.+   +|+.|+|.|.+..
T Consensus         9 ~~~C~~C~GsG~~~~~~C~~C~G~G~v~~   37 (53)
T 2bx9_A            9 EVACPKCERAGEIEGTPCPACSGKGVILT   37 (53)
T ss_dssp             EEECTTTTTSSEETTEECTTTTTSSEEEC
T ss_pred             cccCCCCcceeccCCCCCccCCCCccEEE
Confidence            4567777777766   7777777777654

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.41  E-value=8.1e-05  Score=45.76  Aligned_cols=26  Identities=42%  Similarity=0.890  Sum_probs=17.5

Q ss_pred             cccCccCcCcee---eEcCCCCCccEEEE
Q 032147           57 EPPCIVCHGTGR---VDCYNCSGKGRTNK   82 (146)
Q Consensus        57 ~~~C~~C~GsG~---~~C~~C~G~G~~~~   82 (146)
                      ...|+.|+|+|.   .+|+.|+|+|.+..
T Consensus         9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A            9 ETTCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             EEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             eccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            346777777776   66777777776653

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.32  E-value=0.00012  Score=44.98  Aligned_cols=28  Identities=36%  Similarity=0.733  Sum_probs=19.3

Q ss_pred             cccCccCcCcee---eEcCCCCCccEEEEEe
Q 032147           57 EPPCIVCHGTGR---VDCYNCSGKGRTNKTH   84 (146)
Q Consensus        57 ~~~C~~C~GsG~---~~C~~C~G~G~~~~~~   84 (146)
                      ...|+.|+|+|.   .+|+.|+|+|.+...+
T Consensus         9 ~~~C~~C~GsG~~~~~~C~~C~G~G~v~~~q   39 (53)
T 2bx9_A            9 EVACPKCERAGEIEGTPCPACSGKGVILTAQ   39 (53)
T ss_dssp             EEECTTTTTSSEETTEECTTTTTSSEEECHH
T ss_pred             cccCCCCcceeccCCCCCccCCCCccEEEEe
Confidence            346777777776   6777777777776543

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.07  E-value=1.7e-05  Score=70.73  Aligned_cols=81  Identities=15%  Similarity=0.304  Sum_probs=60.3

Q ss_pred             eeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCcee---------eEcCCCCCccEEEEE--------eeeCCCC
Q 032147           28 GVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGR---------VDCYNCSGKGRTNKT--------HLTMLPR   90 (146)
Q Consensus        28 ~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~---------~~C~~C~G~G~~~~~--------~~~~~g~   90 (146)
                      .+.+.|+|+|      ++.|.++++++.+...|..|+|+|+         .+|+.|+|+......        .....|.
T Consensus       168 ~~~l~i~fee------A~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~  241 (669)
T 3pmq_A          168 ITNQHYDWQS------SGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTG  241 (669)
T ss_dssp             SCCCEEEEEC------SSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSS
T ss_pred             eEEEEEEhHH------hhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccC
Confidence            4778999999      8999999999999999999999984         689999999421110        0111233


Q ss_pred             c-ccceeCCCCCCccE----------E----eCCCCCCe
Q 032147           91 G-EWPKWCKTCSGGGL----------I----YCSRCLGT  114 (146)
Q Consensus        91 ~-~~~~~C~~C~G~G~----------~----~C~~C~G~  114 (146)
                      | +....|..|+..+.          .    .|..|+..
T Consensus       242 fP~~~~~C~~CH~~~~~la~~~~w~~~ps~~aC~sCH~~  280 (669)
T 3pmq_A          242 FPQSISNCQTCHADNPDLADRQNWYRVPTMEACGACHTQ  280 (669)
T ss_dssp             CSSCTTCCTTTSCCCTTCCSCSCTTTCCCHHHHHHHCCS
T ss_pred             CCCccCcchhhcCCccccccccccccCCchhhhhhccCC
Confidence            3 45678999998875          1    68888753

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=95.58  E-value=0.0056  Score=45.90  Aligned_cols=36  Identities=19%  Similarity=0.112  Sum_probs=27.0

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCccCcCceeeEcCCCCCccEE
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCIVCHGTGRVDCYNCSGKGRT   80 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~~C~GsG~~~C~~C~G~G~~   80 (146)
                      ++.+.|.|||+|      +|+|+++.+.+.             ..|+.|+|+|.+
T Consensus         4 d~~~~l~islee------~~~G~~k~i~i~-------------~~c~~c~G~g~~   39 (181)
T 3agx_A            4 PVTHDLRVSLEE------IYSGCTKKMKIS-------------HKRLNPDGKSIR   39 (181)
T ss_dssp             --CEEEEECHHH------HHHCEEEEEEEE-------------EEEECTTSSCEE
T ss_pred             CEEEEEEEEHHH------hcCCcEEEEEEe-------------cccCCCCCceEE
Confidence            567899999999      999999999765             345666666653

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=91.88  E-value=0.12  Score=38.36  Aligned_cols=30  Identities=20%  Similarity=0.154  Sum_probs=27.1

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeCCcccCc
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKKPEPPCI   61 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~~~~~C~   61 (146)
                      ++.+.|.|||+|      +|+|+++.+++.+...|.
T Consensus         5 d~~~~l~islee------~~~G~~k~i~~~~~~~c~   34 (180)
T 2q2g_A            5 SHEVPLLVTLEE------LYLGKRKKIKVTRKRFIE   34 (180)
T ss_dssp             EEEEEEEECHHH------HHHCEEEEEEEEEEEEET
T ss_pred             CEEEEEEeeHHH------hcCCcEEEEEEeEEEecC
Confidence            567899999999      999999999999888885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.65
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.59
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	98.29
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.94
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	97.32
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	90.4
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	89.99
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	80.99

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.1e-17  Score=109.09  Aligned_cols=69  Identities=30%  Similarity=0.636  Sum_probs=61.0

Q ss_pred             CeEEEEEeCCcccCccCcCcee------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE---eCCCCCCeeEE
Q 032147           47 NVRKLARKKPEPPCIVCHGTGR------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI---YCSRCLGTGEY  117 (146)
Q Consensus        47 G~~~~i~~~~~~~C~~C~GsG~------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~---~C~~C~G~G~~  117 (146)
                      |++++|.+++.+.|+.|+|+|+      .+|+.|+|+|++....    ++++++++|+.|+|+|++   +|+.|+|+|++
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~----g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v   76 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEEec----ccceeeEECcccCcceeECCCCCCCCCCceEe
Confidence            5567788999999999999995      7899999999886543    778888999999999999   99999999998


Q ss_pred             Ee
Q 032147          118 RY  119 (146)
Q Consensus       118 ~~  119 (146)
                      ++
T Consensus        77 ~k   78 (79)
T d1exka_          77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ec
Confidence            75

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=1.9e-16  Score=103.22  Aligned_cols=63  Identities=27%  Similarity=0.522  Sum_probs=56.9

Q ss_pred             cccCccCcCcee-----eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE-----eCCCCCCeeEEEe
Q 032147           57 EPPCIVCHGTGR-----VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI-----YCSRCLGTGEYRY  119 (146)
Q Consensus        57 ~~~C~~C~GsG~-----~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~-----~C~~C~G~G~~~~  119 (146)
                      .++|+.|+|+|+     .+|+.|+|+|++....++++++++++.+|+.|+|+|++     +|+.|+|+|++++
T Consensus         2 ~v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           2 QILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             ccCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            578999999996     78999999999999888887666788999999999987     7999999999875

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=2e-07  Score=60.20  Aligned_cols=39  Identities=33%  Similarity=0.893  Sum_probs=33.6

Q ss_pred             CcccCccCcCcee-----------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           56 PEPPCIVCHGTGR-----------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        56 ~~~~C~~C~GsG~-----------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      ....|+.|+|+|.           .+|+.|+|+|+++            ..+|+.|+|+|++
T Consensus        27 ~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i------------~~~C~~C~G~G~v   76 (79)
T d1exka_          27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI------------KDPCNKCHGHGRV   76 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC------------SSBCGGGTTSSEE
T ss_pred             cceeCCCccceeEEEEecccceeeEECcccCcceeEC------------CCCCCCCCCceEe
Confidence            3567999999995           6899999999986            4689999999986

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.94  E-value=8.7e-07  Score=56.43  Aligned_cols=40  Identities=30%  Similarity=0.719  Sum_probs=33.2

Q ss_pred             cccCccCcCcee---------------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           57 EPPCIVCHGTGR---------------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        57 ~~~C~~C~GsG~---------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      ...|+.|+|+|.               .+|+.|+|+|.++.          ...+|+.|+|+|.+
T Consensus        18 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~----------~~~~C~~C~G~g~v   72 (74)
T d1nlta3          18 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID----------PKDRCKSCNGKKVE   72 (74)
T ss_dssp             CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC----------TTSBCSSSTTSCEE
T ss_pred             CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeC----------CCCCCCCCCCeeEe
Confidence            457999999994               56999999998753          25689999999975

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=97.32  E-value=1.5e-06  Score=56.59  Aligned_cols=61  Identities=20%  Similarity=0.340  Sum_probs=46.7

Q ss_pred             ccCccCcCcee---------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE---eCCCCCCeeEEE
Q 032147           58 PPCIVCHGTGR---------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI---YCSRCLGTGEYR  118 (146)
Q Consensus        58 ~~C~~C~GsG~---------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~---~C~~C~G~G~~~  118 (146)
                      ..|..|+|.|.         ..|..|+|+|.........++.++.-+.|..|+|.|+.   .|..|++.|.+.
T Consensus        12 ~~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          12 GGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             TCGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            36999999884         46999999997654443334444567889999998876   899999998643

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.40  E-value=0.025  Score=35.12  Aligned_cols=24  Identities=17%  Similarity=0.091  Sum_probs=21.1

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKK   55 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~   55 (146)
                      ++.+.|.+||+|      +|+|+++.+++.
T Consensus         2 ~v~~~l~vtLee------~~~G~~k~i~~~   25 (80)
T d1c3ga1           2 TVQVNLPVSLED------LFVGKKKSFKIG   25 (80)
T ss_dssp             EEEEEEEECHHH------HHHTCEEEEEEE
T ss_pred             CEEEEeEEEHHH------HhCCCceEeecc
Confidence            467899999999      999999998765

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=89.99  E-value=0.0092  Score=37.65  Aligned_cols=38  Identities=24%  Similarity=0.493  Sum_probs=27.4

Q ss_pred             cccCccCcCcee---------------eEcCCCCCccEEEEEeeeCCCCcccceeCCCCCCccEE
Q 032147           57 EPPCIVCHGTGR---------------VDCYNCSGKGRTNKTHLTMLPRGEWPKWCKTCSGGGLI  106 (146)
Q Consensus        57 ~~~C~~C~GsG~---------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  106 (146)
                      ...|..|+|++.               ..|..|+|.|..            ....|..|.+.|+.
T Consensus        31 ~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~------------~~~~C~~CH~~gr~   83 (90)
T d1m1qa_          31 FAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVG------------QKPTCESCHDDGRT   83 (90)
T ss_dssp             HHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTT------------CCCCSTTTCSSCCC
T ss_pred             CCcCcccCCCceeEeeccccccCccccccCccccCCCCc------------CCCccccccCCCcc
Confidence            356999998884               557777776543            25679999998864

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.99  E-value=0.17  Score=30.72  Aligned_cols=24  Identities=8%  Similarity=-0.092  Sum_probs=20.4

Q ss_pred             cceeeEEEeeecCcceeeeEeCeEEEEEeC
Q 032147           26 SNGVPLSLSFKKPSWVVRTESNVRKLARKK   55 (146)
Q Consensus        26 ~~~~~l~isl~ep~~~~~~~~G~~~~i~~~   55 (146)
                      |+++.|.|||+|      +|+|.++.+.+.
T Consensus         6 di~~~l~islee------a~~G~~~~~~~~   29 (74)
T d1nlta1           6 DIKHEISASLEE------LYKGRTAKLALN   29 (74)
T ss_dssp             CEEEEEEECTTH------HHHCEEEEEEEE
T ss_pred             CEEEEEEecHHH------HHhhcccceeec
Confidence            467889999999      999999988764