Citrus Sinensis ID: 032160

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGKDENPLSF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MALIFLFWFLMSAINIALIASTFYQLLCLldlesddinpfeassrinfwvepEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEalagkdenplsf
Flexible Loop (DISEMBL)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEAlagkdenplsf
Low Complexity Region (SEG)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFllqglfcilllVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGKDENPLSF
Disordered region (IsUnstruct)
**LIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEAL**********
Disordered Region (DISOPRED)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAG********
Disordered Region (DISEMBL)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGKDENPLSF
Disordered Region (DISPRO)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEAL**********
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGKDENPLSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q9C7D7	146	Protein cornichon homolog	yes	no	0.965	0.965	0.489	7e-36
Q84W04	137	Protein cornichon homolog	no	no	0.712	0.759	0.538	2e-25
Q9SZ74	135	Protein cornichon homolog	no	no	0.678	0.733	0.535	5e-24
Q3EDD7	129	Probable protein cornicho	no	no	0.732	0.829	0.504	1e-23
Q8GWT5	137	Protein cornichon homolog	no	no	0.698	0.744	0.539	1e-23
P53173	138	ER-derived vesicles prote	yes	no	0.746	0.789	0.381	7e-16
P38312	142	ER-derived vesicles prote	no	no	0.582	0.598	0.411	2e-11
O14038	134	Uncharacterized protein C	yes	no	0.582	0.634	0.364	3e-10
Q9CX13	139	Protein cornichon homolog	yes	no	0.869	0.913	0.323	1e-09
Q3T126	139	Protein cornichon homolog	yes	no	0.869	0.913	0.316	2e-09

>sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1

 Score =  149 bits (375), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 69/141 (48%), Positives = 96/141 (68%)

Query: 1   MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLF 60
           MA     W +   +++AL+AS FYQ++CL DLE+D +NPFE S+RIN  V PEF+LQG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIF 120
           C+L L+T HW+ FL+ VP+  YH  LY +R++LIDVTEVFR +  EKK R  KLGFYV  
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FALVIAKLAMAGFEALAGKDE 141
           F +V+ +L ++   +    D+
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDD 141

Arabidopsis thaliana (taxid: 3702)

>sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query: 16  IALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLL 75
           IAL+    YQL+CL DLE D INP++++SRIN  V PEF++QG+ C+  L+TGHW M LL
Sbjct: 15  IALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLL 74

Query: 76  GVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            +P + Y+ +LY KR+HL+DVTE+F  L  EKK RL KL + V+
Sbjct: 75  CLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 118

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ74|CNIH5_ARATH Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2

 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 69/99 (69%)

Query: 17  ALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLG 76
            LI    YQL CL DLE D INP++ SSRIN  V PEF LQGL C+  ++TGHW M +L 
Sbjct: 16  TLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLS 75

Query: 77  VPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLG 115
           +P + Y++ LYMKR+HL DVTE++   K E+K R+ K+G
Sbjct: 76  LPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIG 114

Arabidopsis thaliana (taxid: 3702)

>sp|Q3EDD7|CNIH2_ARATH Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 76/107 (71%)

Query: 19  IASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVP 78
           +A+  + L+CL DLE D INP++++SRIN  V PEF++QG+ C+  L+TGHW M LL +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  LVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
            + Y+ +LY KR+HL+DVTE+F  L  EKK RL KL + V+   L I
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTI 116

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GWT5|CNIH3_ARATH Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 72/102 (70%)

Query: 24  YQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYH 83
           YQL+ L DLE D INP++++SRINF V PE +LQG  C+  LVTGHW M LL VP + Y+
Sbjct: 23  YQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYN 82

Query: 84  VNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
            +LY +++HLIDVTE+F  L  EKK RL KL + ++   L I
Sbjct: 83  FHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTI 124

Arabidopsis thaliana (taxid: 3702)

>sp|P53173|ERV14_YEAST ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV14 PE=1 SV=3

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 31  DLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKR 90
           DLE+D INP E  S++N  + PE  L G   +L L+ G+W +FLL +P++ Y++N    +
Sbjct: 29  DLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLNKIYNK 88

Query: 91  KHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGKD 140
             L+D TE+FR L   K+    KLGF+++ F   + ++ MA   A +G D
Sbjct: 89  VQLLDATEIFRTLGKHKRESFLKLGFHLLMFFFYLYRMIMA-LIAESGDD 137

Could regulate export of the bud site and axial growth sites selection protein AXL2 and possibly other secretory proteins from the endoplasmic reticulum in COPII-coated vesicles. Seems to be required for axial budding pattern in haploid cells.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P38312|ERV15_YEAST ER-derived vesicles protein ERV15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV15 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%)

Query: 31  DLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKR 90
           DLE+D IN  E   R+N    PE +LQ     L L  G+W +FLL VP++ Y+ +   K+
Sbjct: 32  DLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNASKVYKK 91

Query: 91  KHLIDVTEVFRNLKVEKKFRLAKLG 115
            HL+D T++FR L   K     KLG
Sbjct: 92  THLLDATDIFRKLGRCKIECFLKLG 116

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O14038|YEY5_SCHPO Uncharacterized protein C2C4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.05 PE=3 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 51/85 (60%)

Query: 31  DLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKR 90
           DL+ D INP + S ++N++V PE   Q    +LLL++G WI FLL VP++ ++  + M  
Sbjct: 30  DLKDDFINPIDLSRKLNWYVLPEMGFQAFSALLLLLSGAWITFLLNVPMLAWNAKMIMSN 89

Query: 91  KHLIDVTEVFRNLKVEKKFRLAKLG 115
            H+ D T +F+++   +K    KL 
Sbjct: 90  THMHDSTTIFKDVSSRQKRSFFKLA 114

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9CX13|CNIH4_MOUSE Protein cornichon homolog 4 OS=Mus musculus GN=Cnih4 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 2   ALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFC 61
           A++FLF  L      ALI  + Y ++ L DLE D IN     S++N WV PE +   +  
Sbjct: 3   AVVFLFSLLDCC---ALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTIVT 59

Query: 62  ILLLVTGHWIMFLLGVPLVCYHVNLYM----KRKHLIDVTEVFR--NLKVEKKFRLAKLG 115
           +L+LV+ HW +FLL +P+  +++  ++        + D TE+     LK   K  + KLG
Sbjct: 60  VLMLVSLHWFIFLLNLPVATWNIYRFIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLG 119

Query: 116 FYVIFFALVIAKLAMA 131
           FY++ F + +  + +A
Sbjct: 120 FYLLCFFMYLYSMILA 135

Mus musculus (taxid: 10090)

>sp|Q3T126|CNIH4_BOVIN Protein cornichon homolog 4 OS=Bos taurus GN=CNIH4 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 2   ALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFC 61
           A++F+F  L      ALI  + Y ++ L DLE D IN     S++N WV PE +   L  
Sbjct: 3   AVVFVFSLLDCC---ALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTLVT 59

Query: 62  ILLLVTGHWIMFLLGVPLVCYHVNLYM----KRKHLIDVTEVFR--NLKVEKKFRLAKLG 115
           +L+L++ HW +FLL +P+  +++  Y+        + D TE+     LK   K  + KLG
Sbjct: 60  VLMLISLHWFIFLLNLPVAAWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLG 119

Query: 116 FYVIFFALVIAKLAMA 131
           F+++ F + +  + +A
Sbjct: 120 FHLLCFFMYLYSMILA 135

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
449453826	146	PREDICTED: protein cornichon homolog 1-l	0.965	0.965	0.574	1e-39
297739714	152	unnamed protein product [Vitis vinifera]	0.972	0.934	0.542	4e-38
225441700	146	PREDICTED: protein cornichon homolog 1-l	0.931	0.931	0.544	7e-38
147841607	160	hypothetical protein VITISV_035789 [Viti	0.897	0.818	0.568	4e-37
351721034	139	uncharacterized protein LOC100527262 [Gl	0.890	0.935	0.580	1e-36
388522853	149	unknown [Lotus japonicus]	0.952	0.932	0.557	2e-36
449453824	154	PREDICTED: protein cornichon homolog 1-l	0.931	0.883	0.576	3e-36
356500457	149	PREDICTED: protein cornichon homolog 1-l	0.993	0.973	0.534	4e-36
351725425	149	uncharacterized protein LOC100500341 pre	0.993	0.973	0.541	5e-36
357509819	142	ER-derived vesicles protein ERV14 [Medic	0.890	0.915	0.572	9e-35

>gi|449453826|ref|XP_004144657.1| PREDICTED: protein cornichon homolog 1-like isoform 2 [Cucumis sativus] gi|449499429|ref|XP_004160814.1| PREDICTED: protein cornichon homolog 1-like isoform 2 [Cucumis sativus]

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/141 (57%), Positives = 107/141 (75%)

Query: 1   MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLF 60
           MA   +FWF+    NIAL+   FYQLL L DLE+D +N +++SSRIN  V PEFL+QG+F
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIF 120
           C L L TGHW MFL+ VP+ CYH+NL++KR+HLIDVTEVFR LK EK FRLAKL FY++ 
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FALVIAKLAMAGFEALAGKDE 141
           F +VI +L ++ F +L+ +D+
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDD 141

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739714|emb|CBI29896.3| unnamed protein product [Vitis vinifera]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 104/142 (73%)

Query: 1   MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLF 60
           M+   + W +   INIAL+ STFYQ+LCL DLE+D +NP+E+SSRIN  V P+F+LQG+ 
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 61  CILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIF 120
           CIL L+T HW +FL+ VP+ CY+  L+MKR+HLIDVTEVFR L  EKK+R+AKL FY+  
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 121 FALVIAKLAMAGFEALAGKDEN 142
           F +VI ++  AG  +L   +E 
Sbjct: 121 FIIVIIRILAAGSLSLYQSEEE 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441700|ref|XP_002282874.1| PREDICTED: protein cornichon homolog 1-like [Vitis vinifera]

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 103/136 (75%)

Query: 6   LFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLL 65
           + W +   INIAL+ STFYQ+LCL DLE+D +NP+E+SSRIN  V P+F+LQG+ CIL L
Sbjct: 6   ILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFL 65

Query: 66  VTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
           +T HW +FL+ VP+ CY+  L+MKR+HLIDVTEVFR L  EKK+R+AKL FY+  F +VI
Sbjct: 66  LTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVI 125

Query: 126 AKLAMAGFEALAGKDE 141
            +L +  F ++  +++
Sbjct: 126 IRLVICIFNSVIDEED 141

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841607|emb|CAN64231.1| hypothetical protein VITISV_035789 [Vitis vinifera]

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 100/132 (75%), Gaps = 1/132 (0%)

Query: 8   WFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVT 67
           W +   INIAL+ STFYQ+LCL DLE+D +NP+E+SSRIN  V P+F+LQG+ CIL L+T
Sbjct: 8   WIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLT 67

Query: 68  GHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAK 127
            HW +FL+ VP+ CY+  L+MKR+HLIDVTEVFR L  EKK+R+AKL FY+  F +VI +
Sbjct: 68  WHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIR 127

Query: 128 LAMA-GFEALAG 138
            ++  G+  LA 
Sbjct: 128 FSLLFGYRILAA 139

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721034|ref|NP_001237196.1| uncharacterized protein LOC100527262 [Glycine max] gi|255631904|gb|ACU16319.1| unknown [Glycine max]

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/131 (58%), Positives = 99/131 (75%), Gaps = 1/131 (0%)

Query: 1   MALIFLFWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGL 59
           M L   FWF++   +N A +ASTFYQ+L L DLE+D INP++A+SRIN+++ PEF+ QGL
Sbjct: 1   MGLDLFFWFVLCLPLNFAFLASTFYQVLMLSDLEADFINPYDAASRINYFIVPEFIGQGL 60

Query: 60  FCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            C   L+TGHWIMFL+ VP+ CYHV LYMKRKHLIDVTEVFR L  EKKFR+AK+ +Y+ 
Sbjct: 61  LCAFCLLTGHWIMFLITVPVTCYHVMLYMKRKHLIDVTEVFRLLNAEKKFRIAKIAYYLT 120

Query: 120 FFALVIAKLAM 130
              + I +L +
Sbjct: 121 IIFISIFRLVL 131

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522853|gb|AFK49488.1| unknown [Lotus japonicus]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/140 (55%), Positives = 102/140 (72%), Gaps = 1/140 (0%)

Query: 7   FWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLL 65
           FW ++    NIAL+ASTFYQ+L L DLE+D +NPF+ASSRIN++V PEF+ QG+ C L L
Sbjct: 7   FWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGVLCALCL 66

Query: 66  VTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
            TGHW+MFLL VP+ CYHV LY+KR+HLIDVTEVFR L  EK+FR+AKL  Y+    + I
Sbjct: 67  FTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAKLVLYLTVLIVTI 126

Query: 126 AKLAMAGFEALAGKDENPLS 145
            +L +     L  +D++ L 
Sbjct: 127 FRLTLIAVFYLGIEDDDDLG 146

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453824|ref|XP_004144656.1| PREDICTED: protein cornichon homolog 1-like isoform 1 [Cucumis sativus] gi|449499426|ref|XP_004160813.1| PREDICTED: protein cornichon homolog 1-like isoform 1 [Cucumis sativus]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 104/137 (75%), Gaps = 1/137 (0%)

Query: 1   MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLF 60
           MA   +FWF+    NIAL+   FYQLL L DLE+D +N +++SSRIN  V PEFL+QG+F
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIF 120
           C L L TGHW MFL+ VP+ CYH+NL++KR+HLIDVTEVFR LK EK FRLAKL FY++ 
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FALVIAK-LAMAGFEAL 136
           F +VI + + +AG +++
Sbjct: 121 FLVVIFRIIVVAGMKSV 137

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500457|ref|XP_003519048.1| PREDICTED: protein cornichon homolog 1-like [Glycine max]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/146 (53%), Positives = 101/146 (69%), Gaps = 1/146 (0%)

Query: 1   MALIFLFWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGL 59
           M    LFW ++    NIAL+ASTFYQ+L L DLESD INPF+A+SRIN++V PE++ QG 
Sbjct: 1   MGWNLLFWLVICFPANIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEYVGQGA 60

Query: 60  FCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            C L L TGHW MFLL VP+ CYH+ LY+KR+HLIDVTEVFR L  EKK+R+AKL  Y+ 
Sbjct: 61  LCALCLFTGHWFMFLLTVPVTCYHLRLYVKREHLIDVTEVFRVLNAEKKYRIAKLALYLT 120

Query: 120 FFALVIAKLAMAGFEALAGKDENPLS 145
              + I +L +     L  +D+  + 
Sbjct: 121 VLIVTIFRLTLTAVYYLGIEDDEDIG 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725425|ref|NP_001236580.1| uncharacterized protein LOC100500341 precursor [Glycine max] gi|255630079|gb|ACU15393.1| unknown [Glycine max]

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 1/146 (0%)

Query: 1   MALIFLFWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGL 59
           M    LFW  +    NIAL+ASTFYQ+L L DLESD INPF+A+SRIN++V PEF+ QG 
Sbjct: 1   MGWNLLFWLAICFPSNIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEFVGQGA 60

Query: 60  FCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            C L L TGHW MFLL VP+ CYH+ LY+KR+HLIDVTEVFR L  EKK+R+AKL  Y+ 
Sbjct: 61  LCALCLFTGHWFMFLLTVPVTCYHLRLYVKREHLIDVTEVFRVLNAEKKYRIAKLALYLT 120

Query: 120 FFALVIAKLAMAGFEALAGKDENPLS 145
              + I +L +     L  +D+  + 
Sbjct: 121 VLIVTIFRLTLTAVYYLGIEDDEDIG 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509819|ref|XP_003625198.1| ER-derived vesicles protein ERV14 [Medicago truncatula] gi|124360135|gb|ABN08151.1| Cornichon [Medicago truncatula] gi|355500213|gb|AES81416.1| ER-derived vesicles protein ERV14 [Medicago truncatula] gi|388494654|gb|AFK35393.1| unknown [Medicago truncatula]

 Score =  151 bits (381), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 1/131 (0%)

Query: 1   MALIFLFWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGL 59
           MA   +FW L+   +NIA +AS FYQ+L L DLE+D INP++ASS+IN++V PEF+ QGL
Sbjct: 1   MAFDLIFWLLICFPLNIAFLASAFYQVLMLSDLEADYINPYDASSKINYFVVPEFIGQGL 60

Query: 60  FCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            C L L TGHW+MFLL +PL  YHV LY+KR+HL+DVTEVFR L  EKKFR+ KL FY+ 
Sbjct: 61  LCALFLFTGHWVMFLLMLPLASYHVMLYVKRQHLLDVTEVFRVLNAEKKFRIVKLTFYLT 120

Query: 120 FFALVIAKLAM 130
              + I +L +
Sbjct: 121 LVMITIFRLVL 131

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2082199	146	AT3G12180 "AT3G12180" [Arabido	0.965	0.965	0.446	1.4e-30
TAIR|locus:2034660	137	AT1G12390 [Arabidopsis thalian	0.808	0.861	0.466	1.6e-22
TAIR|locus:2015514	137	AT1G62880 "AT1G62880" [Arabido	0.808	0.861	0.457	1.5e-21
TAIR|locus:2118101	135	AT4G12090 "AT4G12090" [Arabido	0.753	0.814	0.454	1.3e-20
TAIR|locus:2034655	129	AT1G12340 "AT1G12340" [Arabido	0.732	0.829	0.467	2.1e-20
UNIPROTKB|G4MYQ8	138	MGG_08132 "Uncharacterized pro	0.869	0.920	0.323	6.7e-17
ASPGD|ASPL0000028082	138	AN5195 [Emericella nidulans (t	0.869	0.920	0.307	6e-16
SGD|S000003022	138	ERV14 "COPII-coated vesicle pr	0.924	0.978	0.316	6e-16
POMBASE|SPAC30C2.05	137	erv14 "cornichon family protei	0.767	0.817	0.304	1.3e-13
SGD|S000000414	142	ERV15 "Protein involved in exp	0.876	0.901	0.305	5.6e-13

TAIR|locus:2082199 AT3G12180 "AT3G12180" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 63/141 (44%), Positives = 88/141 (62%)

Query:     1 MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXX 60
             MA     W +   +++AL+AS FYQ++CL DLE+D +NPFE S+RIN  V PEF      
Sbjct:     1 MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query:    61 XXXXXVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIF 120
                  +T HW+ FL+ VP+  YH  LY +R++LIDVTEVFR +  EKK R  KLGFYV  
Sbjct:    61 CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query:   121 FALVIAKLAMAGFEALAGKDE 141
             F +V+ +L ++   +    D+
Sbjct:   121 FIMVVFRLTLSAVYSFTEDDD 141

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

TAIR|locus:2034660 AT1G12390 [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 55/118 (46%), Positives = 72/118 (61%)

Query:     8 WFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXXXXXXVT 67
             W +     IAL+    YQL+CL DLE D INP++++SRIN  V PEF           +T
Sbjct:     7 WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query:    68 GHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
             GHW M LL +P + Y+ +LY KR+HL+DVTE+F  L  EKK RL KL + V+   L I
Sbjct:    67 GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTI 124

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2015514 AT1G62880 "AT1G62880" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 54/118 (45%), Positives = 71/118 (60%)

Query:     8 WFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXXXXXXVT 67
             W +   I I L+    YQL+ L DLE D INP++++SRINF V PE            VT
Sbjct:     7 WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query:    68 GHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
             GHW M LL VP + Y+ +LY +++HLIDVTE+F  L  EKK RL KL + ++   L I
Sbjct:    67 GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTI 124

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

TAIR|locus:2118101 AT4G12090 "AT4G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 50/110 (45%), Positives = 65/110 (59%)

Query:     6 LFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXXXXXX 65
             L W +       LI    YQL CL DLE D INP++ SSRIN  V PEF           
Sbjct:     5 LDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYI 64

Query:    66 VTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLG 115
             +TGHW M +L +P + Y++ LYMKR+HL DVTE++   K E+K R+ K+G
Sbjct:    65 LTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIG 114

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

TAIR|locus:2034655 AT1G12340 "AT1G12340" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 50/107 (46%), Positives = 68/107 (63%)

Query:    19 IASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXXXXXXVTGHWIMFLLGVP 78
             +A+  + L+CL DLE D INP++++SRIN  V PEF           +TGHW M LL +P
Sbjct:    10 LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query:    79 LVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVI 125
              + Y+ +LY KR+HL+DVTE+F  L  EKK RL KL + V+   L I
Sbjct:    70 YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTI 116

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|G4MYQ8 MGG_08132 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 42/130 (32%), Positives = 73/130 (56%)

Query:     2 ALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXX 61
             A ++LF  L++A+N+ L    F+ ++   DLE D INP +  +R+N ++ PE        
Sbjct:     5 AWLYLFAVLVNAVNLFL--QVFFTIM-YSDLECDYINPIDLCNRLNTYIIPEAAVHGFLT 61

Query:    62 XXXXVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFF 121
                 + G+W+  +L +PL+ +++   +   HL+D TE+FR L V KK    KLGF++I F
Sbjct:    62 FIFLINGYWLPLILNLPLLGWNIKKIVDNAHLLDATEIFRKLNVHKKESFIKLGFHLIMF 121

Query:   122 ALVIAKLAMA 131
                +  + +A
Sbjct:   122 FFYLYSMIVA 131

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000028082 AN5195 [Emericella nidulans (taxid:162425)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/130 (30%), Positives = 70/130 (53%)

Query:     2 ALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXX 61
             A ++L   L++A+N+ L    F+ ++   DLE D INP +  +R+N ++ PE        
Sbjct:     5 AWLYLLAVLINAVNLFL--QVFFTIM-YSDLECDYINPIDLCNRLNAYIIPEAGVHAFLT 61

Query:    62 XXXXVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFF 121
                 + G+W+   L +PL+ ++       +HL+D TE+FR L V KK    KLGF+++ F
Sbjct:    62 FLFVINGYWLAIALNLPLLAFNAKKIYDNQHLLDATEIFRKLNVHKKESFIKLGFHLLMF 121

Query:   122 ALVIAKLAMA 131
                +  + +A
Sbjct:   122 FFYLYSMIVA 131

GO:0030437 "ascospore formation" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0007120 "axial cellular bud site selection" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0035556 "intracellular signal transduction" evidence=IEA

SGD|S000003022 ERV14 "COPII-coated vesicle protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/139 (31%), Positives = 74/139 (53%)

Query:     2 ALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXX 61
             A +F+   +++ IN  L     + +L   DLE+D INP E  S++N  + PE        
Sbjct:     3 AWLFILAVVVNCIN--LFGQVHFTIL-YADLEADYINPIELCSKVNKLITPEAALHGALS 59

Query:    62 XXXXVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFF 121
                 + G+W +FLL +P++ Y++N    +  L+D TE+FR L   K+    KLGF+++ F
Sbjct:    60 LLFLLNGYWFVFLLNLPVLAYNLNKIYNKVQLLDATEIFRTLGKHKRESFLKLGFHLLMF 119

Query:   122 ALVIAKLAMAGFEALAGKD 140
                + ++ MA   A +G D
Sbjct:   120 FFYLYRMIMA-LIAESGDD 137

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0030437 "ascospore formation" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0030134 "ER to Golgi transport vesicle" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP;IPI

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0007120 "axial cellular bud site selection" evidence=IMP

POMBASE|SPAC30C2.05 erv14 "cornichon family protein Erv14 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 35/115 (30%), Positives = 61/115 (53%)

Query:    20 ASTFYQLLCLL---DLESDDINPFEASSRINFWVEPEFXXXXXXXXXXXVTGHWIMFLLG 76
             A+   Q+ C++   DLE D INP +  +++N  V PE            +   W++FL  
Sbjct:    18 ANMLLQIFCVIMFSDLEMDYINPIDLCNKLNDLVMPEIISHTLVTLLLLLGKKWLLFLAN 77

Query:    77 VPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMA 131
             +PL+ +H N  + + H++D TE+FR L   K+    K+ FY+I F  ++  + M+
Sbjct:    78 LPLLVFHANQVIHKTHILDATEIFRQLGRHKRDNFIKVTFYLIMFFTLLYCMVMS 132

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006886 "intracellular protein transport" evidence=IC

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016971 "flavin-linked sulfhydryl oxidase activity" evidence=ISS

GO:0030134 "ER to Golgi transport vesicle" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

SGD|S000000414 ERV15 "Protein involved in export of proteins from the endoplasmic reticulum" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 40/131 (30%), Positives = 65/131 (49%)

Query:     4 IFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFXXXXXXXXX 63
             +F+   +++ +N   I   ++ +L   DLE+D IN  E   R+N    PE          
Sbjct:     8 LFVTGLILNCLNS--ICQIYFTIL-YGDLEADYINSIELCKRVNRLSVPEAILQAFISAL 64

Query:    64 XXVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFAL 123
                 G+W +FLL VP++ Y+ +   K+ HL+D T++FR L   K     KLGFY++ F  
Sbjct:    65 FLFNGYWFVFLLNVPVLAYNASKVYKKTHLLDATDIFRKLGRCKIECFLKLGFYLLIFFF 124

Query:   124 VIAKLAMAGFE 134
                ++  A  E
Sbjct:   125 YFYRMVTALLE 135

GO:0003674 "molecular_function" evidence=ND

GO:0007120 "axial cellular bud site selection" evidence=ISS

GO:0030134 "ER to Golgi transport vesicle" evidence=IGI

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IGI

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0016020 "membrane" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R9M4	CNIH4_PONAB	No assigned EC number	0.3161	0.8698	0.9136	yes	no
Q9P003	CNIH4_HUMAN	No assigned EC number	0.3161	0.8698	0.9136	yes	no
Q9C7D7	CNIH1_ARATH	No assigned EC number	0.4893	0.9657	0.9657	yes	no
Q9CX13	CNIH4_MOUSE	No assigned EC number	0.3235	0.8698	0.9136	yes	no
Q3T126	CNIH4_BOVIN	No assigned EC number	0.3161	0.8698	0.9136	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT3G12180	cornichon family protein; cornichon family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- intracellular signaling cascade; LOCATED IN- endomembrane system, membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Cornichon (InterPro-IPR003377); BEST Arabidopsis thaliana protein match is- cornichon family protein (TAIR-AT1G12390.1); Has 450 Blast hits to 450 proteins in 121 species- Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 110; Plants - 41; Viruses - 0; Other Eukaryotes - 30 (source- NCBI BLink). (146 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT1G66070	translation initiation factor-related; translation initiation factor-related; FUNCTIONS IN- mol [...] (226 aa)				•					0.462
	AT4G26410	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (263 aa)				•					0.462
	AT3G55960	NLI interacting factor (NIF) family protein; NLI interacting factor (NIF) family protein; FUNCT [...] (305 aa)				•					0.460
	AT5G12010	unknown protein; unknown protein; INVOLVED IN- response to salt stress; LOCATED IN- chloroplast [...] (502 aa)				•					0.456
	MAPKKK7	MAPKKK7; ATP binding / binding / kinase/ protein kinase/ protein serine/threonine kinase/ prote [...] (1368 aa)				•					0.456
	AT2G20930	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport, ER to Golgi [...] (140 aa)				•					0.435
	AT1G68730	zinc finger (DNL type) family protein; zinc finger (DNL type) family protein; LOCATED IN- chlor [...] (170 aa)				•					0.430
	MIS12	MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE); encodes a homologue of the yeast (S. pombe) [...] (285 aa)				•					0.424
	AT3G59000	F-box family protein; F-box family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED [...] (491 aa)				•					0.417
	YAB5	YAB5 (YABBY5); transcription factor; YABBY5 (YAB5); FUNCTIONS IN- transcription factor activity [...] (164 aa)				•					0.417

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
pfam03311	128	pfam03311, Cornichon, Cornichon protein	2e-42
PLN00174	160	PLN00174, PLN00174, predicted protein; Provisional	6e-09

>gnl|CDD|217486 pfam03311, Cornichon, Cornichon protein

 Score =  136 bits (344), Expect = 2e-42
 Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 1/126 (0%)

Query: 1   MALIFLFWFLMS-AINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGL 59
           MA  F   ++++  IN AL+    Y ++ L DLE+D INP +  SR+N  V PE++L G 
Sbjct: 1   MAFEFWLLYILALLINAALLFLQVYFVIMLSDLEADYINPIDLCSRLNPLVLPEYILHGF 60

Query: 60  FCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVI 119
            C+L L+TGHW +FLL +PL+ Y+V LY KR HL+D TE+FR L   K+    KL FY++
Sbjct: 61  LCLLFLLTGHWFVFLLNLPLLAYNVYLYYKRTHLLDATEIFRTLSKHKRESFIKLAFYLL 120

Query: 120 FFALVI 125
            F   +
Sbjct: 121 LFFYYL 126

Length = 128

>gnl|CDD|177769 PLN00174, PLN00174, predicted protein; Provisional

 Score = 51.2 bits (122), Expect = 6e-09
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 3   LIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCI 62
           L+ +       + I L  +  Y+LL   DL +D +NP E   ++N    PE+L      I
Sbjct: 14  LVSMGLVSTFMVIICLGYT--YKLL--QDLSTDTVNPVEVCDKVNQLKVPEYLAHLFLSI 69

Query: 63  LLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFY--VIF 120
             ++ G WI+  L  P + Y+   + + KH +D  ++F  L  E +   AK  F+  ++ 
Sbjct: 70  AFVIRGWWIVGFLNFPFIFYNFAQWYEGKHQLDSAQIFNVLSRELRVIKAKSAFFIIIVI 129

Query: 121 FAL 123
           + +
Sbjct: 130 YTI 132

Length = 160

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
KOG2729	137	consensus ER vesicle integral membrane protein inv	100.0
PF03311	128	Cornichon: Cornichon protein; InterPro: IPR003377	100.0
PLN00174	160	predicted protein; Provisional	100.0

>KOG2729 consensus ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-59  Score=354.63  Aligned_cols=135  Identities=44%  Similarity=0.760  Sum_probs=131.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCChHHhhhhcCcchhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 032160            1 MALIFLFWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLV   80 (146)
Q Consensus         1 m~~~~~~~i~a~ll~~~ll~~~vy~li~l~DLe~D~iNP~d~c~~lN~lv~pE~~~h~~l~~l~ll~g~W~~~llnlPll   80 (146)
                      |.+++++|..+++.+++++++++||+||++|||+||+||+|+|||+|++|+||++.||++|++++++|||+++++|+|++
T Consensus         3 ~~~~~~~~~~~~l~~~~li~~~iy~vI~~~DLe~DyiNPid~c~rlN~lVlPE~ilh~~KOGlfLl~g~W~~fllnlP~l   82 (137)
T KOG2729|consen    3 FTFAAFLYTLSLLVCAALIFLQIYFVICLADLETDYINPIDLCSRLNRLVLPEFILHGLLCLLFLLTGHWFMFLLNLPLL   82 (137)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHccHHH
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 032160           81 CYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEA  135 (146)
Q Consensus        81 ~y~~~~y~~r~~l~D~TeIf~~L~~~kk~~~iKl~fyll~Ff~~ly~mi~~lv~~  135 (146)
                      +||+++|.+|+|++|||||||+|++|||||++|+|||+++||+|+||||+|++++
T Consensus        83 ~y~~~~y~~r~~l~D~TeI~n~L~~~~k~~~~KL~fyll~FF~yly~mI~slv~~  137 (137)
T KOG2729|consen   83 AYNAWLYMKRPHLYDPTEIFNTLSSEKKERWIKLAFYLLSFFYYLYWMIYSLVSS  137 (137)
T ss_pred             HHHHHHHHcCCcccCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999875

>PF03311 Cornichon: Cornichon protein; InterPro: IPR003377 The drosophila cornichon protein (gene: cni) [] is required in the germline for dorsal-ventral signalling

Probab=100.00  E-value=4.5e-54  Score=324.04  Aligned_cols=127  Identities=45%  Similarity=0.905  Sum_probs=125.5

Q ss_pred             ChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhcccccCChHHhhhhcCcchhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 032160            1 MALIFL-FWFLMSAINIALIASTFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPL   79 (146)
Q Consensus         1 m~~~~~-~~i~a~ll~~~ll~~~vy~li~l~DLe~D~iNP~d~c~~lN~lv~pE~~~h~~l~~l~ll~g~W~~~llnlPl   79 (146)
                      |+++.+ .|++|++++++++++++||++++||||+||+||+|+|||+||+|+||+++|++++++++++|||+++++|+|+
T Consensus         1 m~~~~~~~~i~alll~~~ll~~~vy~ii~l~DLe~D~iNp~d~c~~lN~lv~pE~~~h~~l~~l~ll~g~w~~~llnlPl   80 (128)
T PF03311_consen    1 MAFDFIVLWILALLLTAALLFIVVYFIICLSDLECDYINPIDLCSRLNPLVLPEYIIHGFLCLLFLLTGHWFLFLLNLPL   80 (128)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888887 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 032160           80 VCYHVNLYMKRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAK  127 (146)
Q Consensus        80 l~y~~~~y~~r~~l~D~TeIf~~L~~~kk~~~iKl~fyll~Ff~~ly~  127 (146)
                      ++||+++|.+|+|++|||||||+|+++||+|++|+|||+++||+|+||
T Consensus        81 ~~y~~~~~~~~~~l~D~T~If~~L~~~kk~~~iKl~~yll~ff~yly~  128 (128)
T PF03311_consen   81 LAYHIYRYFRRQHLYDPTEIFNQLKREKKESFIKLGFYLLLFFYYLYR  128 (128)
T ss_pred             HHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999996

The dorsal-ventral pattern formation involves a reorganisation of the microtubule network correlated with the movement of the oocyte nucleus, and depending on the initial correct establishment of the anterior-posterior axis via a signal from the oocyte produced by cornichon and gurken and received by torpedo protein in the follicle cells. The biochemical function of the cornichon protein is currently not known. It is a protein of 144 residues that seems to contain three transmembrane regions. ; GO: 0035556 intracellular signal transduction, 0016020 membrane

>PLN00174 predicted protein; Provisional

Probab=100.00  E-value=2e-48  Score=301.24  Aligned_cols=110  Identities=27%  Similarity=0.499  Sum_probs=106.0

Q ss_pred             HHHHHHhhhhcccccCChHHhhhhcCcchhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhccCccchhhhhh
Q 032160           22 TFYQLLCLLDLESDDINPFEASSRINFWVEPEFLLQGLFCILLLVTGHWIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFR  101 (146)
Q Consensus        22 ~vy~li~l~DLe~D~iNP~d~c~~lN~lv~pE~~~h~~l~~l~ll~g~W~~~llnlPll~y~~~~y~~r~~l~D~TeIf~  101 (146)
                      ..|.-=.+||||+||+||+|+|+|+|++|+||+++|+++|++++++|+|+++++|+|+++||+++|.+|+|++|||||||
T Consensus        29 ~~~~~~~lsDLE~DYiNPiD~CnrLN~lVlPEyiiH~~l~lLfLltG~W~~fLLNlPll~Yhv~~y~~r~hL~D~TeIfn  108 (160)
T PLN00174         29 LGYTYKLLQDLSTDTVNPVEVCDKVNQLKVPEYLAHLFLSIAFVIRGWWIVGFLNFPFIFYNFAQWYEGKHQLDSAQIFN  108 (160)
T ss_pred             hcchHHHHHHhhhccCCHHHHHHHhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence            34555678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 032160          102 NLKVEKKFRLAKLGFYVIFFALVIA-KLAMA  131 (146)
Q Consensus       102 ~L~~~kk~~~iKl~fyll~Ff~~ly-~mi~~  131 (146)
                      +|++|||+|++|+|||+++||+|+| |||++
T Consensus       109 ~L~~~kKe~~iKLaFYLl~FF~~ly~~mI~~  139 (160)
T PLN00174        109 VLSRELRVIKAKSAFFIIIVIYTIWEWMIWV  139 (160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999 99986

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00