Citrus Sinensis ID: 032161

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSSS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLsfflnrknrppltFALLCKVFILSLIGITLMQICVYtgvsfssptlvsatnnlIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSSS
Flexible Loop (DISEMBL)
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSSS
Low Complexity Region (SEG)
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAftfllavifrfffffifvvfyfliillSSS
Disordered region (IsUnstruct)
****VKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL***
Disordered Region (DISOPRED)
*************PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSS*
Disordered Region (DISEMBL)
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSSS
Disordered Region (DISPRO)
****VKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q945L4	339	WAT1-related protein At5g	yes	no	0.746	0.321	0.513	4e-22
Q8GXB4	374	WAT1-related protein At1g	no	no	0.787	0.307	0.443	1e-19
Q9FL08	368	WAT1-related protein At5g	no	no	0.821	0.326	0.459	5e-19
Q9FL41	402	WAT1-related protein At5g	no	no	0.773	0.281	0.389	6e-19
F4KHA8	370	WAT1-related protein At5g	no	no	0.773	0.305	0.470	3e-18
F4HZQ7	389	WAT1-related protein At1g	no	no	0.842	0.316	0.380	3e-17
O80638	374	WAT1-related protein At2g	no	no	0.773	0.302	0.362	4e-17
Q94JU2	367	WAT1-related protein At3g	no	no	0.835	0.332	0.444	2e-16
F4I5D5	375	WAT1-related protein At1g	no	no	0.835	0.325	0.368	3e-16
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.767	0.287	0.401	6e-16

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 2/111 (1%)

Query: 17  AMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNR-KNRPPLTFA 75
           AMV  +   VG+ TL KAA S+G +P ++ VY+    SL+LLPL+FF  R ++ PPLTF+
Sbjct: 16  AMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPLTFS 75

Query: 76  LLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           +LC + IL LI  +  QI  Y G+ +SSPTL SA +N+ PAFTF+LAV+FR
Sbjct: 76  ILCNMGILGLIA-SAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFR 125

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 69/115 (60%)

Query: 12  LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPP 71
           ++P+ AMV VQ    G+   SK A+  G  PLIL  Y    A++   P++FFL RK RP 
Sbjct: 6   MLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPK 65

Query: 72  LTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           +T  +L +VF  S+ G T  Q+  + G+  SSPT+  A  NL+PA TFLLA IFR
Sbjct: 66  ITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFR 120

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 2/122 (1%)

Query: 6   KQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLN 65
           K     +VP+AAM AV+C  VG  TL KAA  +G +  +   Y+  +++L+LLPLS    
Sbjct: 12  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 71

Query: 66  RKNR-PPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVI 124
           R  R P     L  K+F+L L+G  + QI    G+++SSPTL SA +NL PAFTF LAVI
Sbjct: 72  RSRRLPAAKSPLFFKIFLLGLVGF-MSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 130

Query: 125 FR 126
           FR
Sbjct: 131 FR 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 75/113 (66%)

Query: 14  PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT 73
           PY AM+++Q    G+  ++K +++ G +  +L VY  AIA+ ++ P +FF  RK +P +T
Sbjct: 18  PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query: 74  FALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           F++  ++FIL L+G  + Q   Y G+ ++SPT   A +N++PA TF+LAV+FR
Sbjct: 78  FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFR 130

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 4/117 (3%)

Query: 12  LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNR-P 70
           +VP+ AMVAV+CV VG  TL KAA  +G +  +   Y   +A+L+LLPLS    R  R P
Sbjct: 19  VVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLP 78

Query: 71  PLTFALLCKVFILSLIG-ITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
                +   +F+L+L+G ++L+  C   G+ +SSPTL SA +NL PAFTF LAVIFR
Sbjct: 79  SAKTPVFFNIFLLALVGFMSLIVGC--KGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)

Query: 1   MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPL 60
           MG G   L+  L PY AM+++Q    G+  ++  ++  G    +LAVY  AIA+ ++ P 
Sbjct: 1   MGRG---LMNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPF 57

Query: 61  SFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFL 120
           + F  RK RP +TF +  ++ +L  I   L Q   Y G++++S T  SAT N++PA TF+
Sbjct: 58  ALFHERKIRPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFV 117

Query: 121 LAVIFR 126
           LA+IFR
Sbjct: 118 LAIIFR 123

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 75/113 (66%)

Query: 14  PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT 73
           P+  +V++Q    G++ ++K A++QG +P +LA Y   +A++ + P ++FL+RK RP +T
Sbjct: 8   PFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMT 67

Query: 74  FALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
            ++  K+ +L L+  T+ Q   YTG+ ++S T  +A  N++PAF F++A IFR
Sbjct: 68  LSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 83/126 (65%), Gaps = 4/126 (3%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           M  K     ++P  A+V ++C  VG+ TL KAA  +G +  +  VY+  +A+L+LLP S 
Sbjct: 1   MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLP-SL 59

Query: 63  FLNRKNR--PPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFL 120
           F + ++R  PP+ F++L K+ +L +IG     I  YTG+++SSPTL SA +NL PAFTFL
Sbjct: 60  FCSFRSRTLPPMNFSILYKIVLLGIIGC-CSNIMGYTGINYSSPTLASAISNLTPAFTFL 118

Query: 121 LAVIFR 126
           LAV+FR
Sbjct: 119 LAVVFR 124

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           M VK     LVP+ AM  ++   + +T ++K A++ G +P +  VY +A  S++LLP SF
Sbjct: 1   MEVKVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSF 60

Query: 63  FLNRKNRPP---LTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTF 119
             +R  R      ++ LL +VF L   GI + Q   + G+ FSSP +V A    IP+F+F
Sbjct: 61  LFHRNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSF 120

Query: 120 LLAVI 124
           LL++I
Sbjct: 121 LLSII 125

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 68/112 (60%)

Query: 15  YAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTF 74
           + AM+ +Q    G   +S+AA++ G + L+  VY + IA L+LLP ++FL +K RP +T 
Sbjct: 21  HIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITL 80

Query: 75  ALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
             L + F L+LIGIT  Q     G+  +SPT  S+  N +PA TFL+A + R
Sbjct: 81  NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLR 132

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
224135771	355	predicted protein [Populus trichocarpa]	0.842	0.346	0.637	1e-36
225457103	362	PREDICTED: auxin-induced protein 5NG4-li	0.849	0.342	0.637	3e-36
357477327	353	Auxin-induced protein 5NG4 [Medicago tru	0.849	0.351	0.568	8e-32
297733820	338	unnamed protein product [Vitis vinifera]	0.849	0.366	0.580	2e-31
359491260	359	PREDICTED: LOW QUALITY PROTEIN: auxin-in	0.746	0.303	0.587	1e-26
356565026	565	PREDICTED: auxin-induced protein 5NG4-li	0.732	0.189	0.522	8e-25
255581160	356	Auxin-induced protein 5NG4, putative [Ri	0.780	0.320	0.495	2e-23
224099697	355	predicted protein [Populus trichocarpa]	0.821	0.338	0.5	3e-23
449449196	377	PREDICTED: auxin-induced protein 5NG4-li	0.856	0.331	0.456	2e-22
357463769	345	Auxin-induced protein 5NG4 [Medicago tru	0.773	0.327	0.491	2e-22

>gi|224135771|ref|XP_002322156.1| predicted protein [Populus trichocarpa] gi|222869152|gb|EEF06283.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 102/124 (82%), Gaps = 1/124 (0%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           MGVK +++ L+P+AAMV V+C+ VG+TTLSKAA+S+G +  +  VY++A+A+LILLP S 
Sbjct: 1   MGVKSVLLNLLPFAAMVMVECLDVGLTTLSKAAMSKGMSQFVFVVYSNALATLILLP-SL 59

Query: 63  FLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLA 122
              R  RPP+T++LLCK F+LSL+GITLMQ CV+TGVS+SSPTL SA   LIPAFTFLLA
Sbjct: 60  IFYRTKRPPVTYSLLCKFFLLSLVGITLMQNCVFTGVSYSSPTLASAMGQLIPAFTFLLA 119

Query: 123 VIFR 126
           VIFR
Sbjct: 120 VIFR 123

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457103|ref|XP_002283377.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           MGVK  + G+VP AAMV V+C+ VG+TTLSKAA+S+G    +  VY++A ASLIL  +SF
Sbjct: 1   MGVKAWLSGMVPIAAMVTVECLDVGLTTLSKAAMSRGMDRFVFVVYSNAFASLILFSISF 60

Query: 63  FLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLA 122
              R  RPPL+F+LLCK F+LSL GIT+MQ CV+TGVS+ SPTL SA +NLIPAFTFLLA
Sbjct: 61  IFLRTKRPPLSFSLLCKFFLLSLAGITVMQNCVFTGVSYGSPTLGSAMSNLIPAFTFLLA 120

Query: 123 VIFR 126
           V FR
Sbjct: 121 VAFR 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477327|ref|XP_003608949.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355510004|gb|AES91146.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 96/125 (76%), Gaps = 1/125 (0%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAIS-QGATPLILAVYADAIASLILLPLS 61
           M VK+ ++  +P+AAMV V+C+ VG+TTLSK A+S +G    I  +Y++A+A+ ILLP  
Sbjct: 1   MEVKRYLLECIPFAAMVIVECLDVGLTTLSKEAMSTKGMNHFIFVLYSNALATFILLPSY 60

Query: 62  FFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLL 121
           F +NR  RPPL+F+LL K F L L+GIT+MQ CV+TG+S+SSPTL SA +NL PA TF+L
Sbjct: 61  FLINRTTRPPLSFSLLAKFFFLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVL 120

Query: 122 AVIFR 126
           AVIFR
Sbjct: 121 AVIFR 125

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297733820|emb|CBI15067.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 91/124 (73%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           MG+K  + G+VP AAMV ++C+ VG+ TLSKAA+S+G    +  VY +A+ASLI   LSF
Sbjct: 1   MGMKAWLSGIVPIAAMVMMECLDVGLVTLSKAAMSRGMNHFVFVVYYNALASLIFFLLSF 60

Query: 63  FLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLA 122
             +R  RPPLTF+  CK F+L L GIT+MQ  V+TGVS+SSPTL  A +NLIPAFTFLLA
Sbjct: 61  IFHRTKRPPLTFSHFCKFFLLGLPGITVMQNWVFTGVSYSSPTLCYAMSNLIPAFTFLLA 120

Query: 123 VIFR 126
           V  R
Sbjct: 121 VAIR 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491260|ref|XP_003634251.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 80/109 (73%)

Query: 18  MVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALL 77
           MV ++C+ VG+ TLSKAA+S+G    +  VY +A+ASLI   LSF  +R  RPPLTF+  
Sbjct: 1   MVMMECLDVGLVTLSKAAMSRGMNHFVFVVYYNALASLIFFLLSFIFHRTKRPPLTFSHF 60

Query: 78  CKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           CK F+L L GIT+MQ  V+TGVS+SSPTL  A +NLIPAFTFLLAV  R
Sbjct: 61  CKFFLLGLPGITVMQNWVFTGVSYSSPTLCYAMSNLIPAFTFLLAVAIR 109

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565026|ref|XP_003550746.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/113 (52%), Positives = 84/113 (74%), Gaps = 6/113 (5%)

Query: 14  PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT 73
           P+ AMV V+C+ VG++TLSKAA+S+G    +L VY++ +A+L+LLP S       RP L+
Sbjct: 230 PFIAMVTVECLNVGLSTLSKAAMSRGVNHFVLVVYSNVLATLLLLPSS------TRPSLS 283

Query: 74  FALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           F+LLCK F+L ++GIT+MQ CV+ G+++SSPTL S  +NL PA TF+LAV  R
Sbjct: 284 FSLLCKFFLLGILGITVMQNCVFIGINYSSPTLGSTMSNLSPAITFVLAVTLR 336

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581160|ref|XP_002531393.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528986|gb|EEF30977.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 12  LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPP 71
           L+P+  MV     Q     ++K A+SQG    ++ VY+DA+++L+LLP SF ++R +R P
Sbjct: 11  LLPFVGMVVAMLAQASNMEVTKLALSQGINKYVIIVYSDALSTLVLLPCSFIIHRSDRTP 70

Query: 72  LTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           L F+LLCK F+LS+ G    QIC Y G+ +SSPTL +A  NLIPAFTF+LA+IFR
Sbjct: 71  LDFSLLCKFFLLSVFGWC-AQICGYVGLQYSSPTLGTAMLNLIPAFTFILAIIFR 124

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099697|ref|XP_002311582.1| predicted protein [Populus trichocarpa] gi|222851402|gb|EEE88949.1| predicted protein [Populus trichocarpa]

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 8/128 (6%)

Query: 3   MGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF 62
           MG+K       P+  MV  +C QVG+  LSKAA+S G T  I  +Y++A+ASLILLP SF
Sbjct: 1   MGLK----AAAPFVGMVMAECAQVGLMILSKAAMSDGMTNFIFVLYSNALASLILLPSSF 56

Query: 63  FLNRKNRPPLTFALLCKVFILSLIGITLMQ----ICVYTGVSFSSPTLVSATNNLIPAFT 118
           FL+R  RPPLTF +LC  F+L L G  ++     I  Y G++ SS TL +A  NLIP  T
Sbjct: 57  FLHRSERPPLTFPILCGFFLLGLFGYAILIYFDFIFGYAGINLSSATLGTAMLNLIPGLT 116

Query: 119 FLLAVIFR 126
           F+LAV FR
Sbjct: 117 FILAVAFR 124

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449196|ref|XP_004142351.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 88/127 (69%), Gaps = 2/127 (1%)

Query: 1   MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPL 60
           M +  + L+ G++P+ AM+A++C+ VG+ TL KAA + G +  +  VY+ + A+L+LLP 
Sbjct: 1   MALTGRSLMEGVLPFPAMMAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPS 60

Query: 61  SFFLNRKNR-PPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTF 119
            F      R PPL F++  K+ +L LIG +  QI  YTG+++SSPTL SA +NL+PAFTF
Sbjct: 61  PFISRTSTRLPPLNFSITSKIALLGLIG-SCSQIMGYTGINYSSPTLASAISNLVPAFTF 119

Query: 120 LLAVIFR 126
           +LA+IFR
Sbjct: 120 ILAIIFR 126

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463769|ref|XP_003602166.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355491214|gb|AES72417.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 79/114 (69%), Gaps = 1/114 (0%)

Query: 13  VPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPL 72
           VP+  M+  +C+QV +  LSK  +SQG T  I   Y++ IA+L+LLP SFF++R  RPP+
Sbjct: 6   VPFVGMIIAECIQVALIILSKQVMSQGMTSFIFIFYSNTIAALVLLPSSFFIHRFQRPPI 65

Query: 73  TFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           TF+ L   FIL L+G  L Q+  Y G+++SS TL +A  NL+P FTF+LAV+FR
Sbjct: 66  TFSTLSGFFILGLLGY-LAQVFGYAGINYSSSTLATAMLNLVPGFTFILAVLFR 118

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.678	0.292	0.485	8.3e-19
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.719	0.280	0.409	3.9e-17
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.684	0.291	0.44	9.3e-17
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.705	0.280	0.420	1.3e-16
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.705	0.278	0.429	5e-16
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.705	0.256	0.359	6.7e-16
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.705	0.275	0.339	3.1e-15
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.780	0.297	0.370	4.4e-15
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.698	0.262	0.392	1.7e-14
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.678	0.275	0.435	2.1e-14

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 49/101 (48%), Positives = 68/101 (67%)

Query:    17 AMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNR-KNRPPLTFA 75
             AMV  +   VG+ TL KAA S+G +P ++ VY+    SL+LLPL+FF  R ++ PPLTF+
Sbjct:    16 AMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPLTFS 75

Query:    76 LLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             +LC + IL LI  +  QI  Y G+ +SSPTL SA +N+ PA
Sbjct:    76 ILCNMGILGLIA-SAFQILGYNGIKYSSPTLSSAMSNVNPA 115

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 43/105 (40%), Positives = 61/105 (58%)

Query:    12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPP 71
             ++P+ AMV VQ    G+   SK A+  G  PLIL  Y    A++   P++FFL RK RP 
Sbjct:     6 MLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPK 65

Query:    72 LTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             +T  +L +VF  S+ G T  Q+  + G+  SSPT+  A  NL+PA
Sbjct:    66 ITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPA 110

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 9.3e-17, P = 9.3e-17
 Identities = 44/100 (44%), Positives = 57/100 (57%)

Query:    17 AMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFAL 76
             AMV VQ V  G+  LSK AISQG  P +   Y  A A+L L P +FFL      PL+F L
Sbjct:    10 AMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFIL 69

Query:    77 LCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             L K+F +SL G+TL     Y  +  ++ T  +AT N IP+
Sbjct:    70 LLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPS 109

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 45/107 (42%), Positives = 71/107 (66%)

Query:    12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNR-- 69
             ++P  A+V ++C  VG+ TL KAA  +G +  +  VY+  +A+L+LLP S F + ++R  
Sbjct:    10 VLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLP-SLFCSFRSRTL 68

Query:    70 PPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             PP+ F++L K+ +L +IG     I  YTG+++SSPTL SA +NL PA
Sbjct:    69 PPMNFSILYKIVLLGIIGCC-SNIMGYTGINYSSPTLASAISNLTPA 114

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 5.0e-16, P = 5.0e-16
 Identities = 46/107 (42%), Positives = 66/107 (61%)

Query:    12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNR-P 70
             +VP+ AMVAV+CV VG  TL KAA  +G +  +   Y   +A+L+LLPLS    R  R P
Sbjct:    19 VVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLP 78

Query:    71 PLTFALLCKVFILSLIG-ITLMQICVYTGVSFSSPTLVSATNNLIPA 116
                  +   +F+L+L+G ++L+  C   G+ +SSPTL SA +NL PA
Sbjct:    79 SAKTPVFFNIFLLALVGFMSLIVGC--KGIEYSSPTLASAISNLTPA 123

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 37/103 (35%), Positives = 66/103 (64%)

Query:    14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT 73
             PY AM+++Q    G+  ++K +++ G +  +L VY  AIA+ ++ P +FF  RK +P +T
Sbjct:    18 PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKIT 77

Query:    74 FALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             F++  ++FIL L+G  + Q   Y G+ ++SPT   A +N++PA
Sbjct:    78 FSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPA 120

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 35/103 (33%), Positives = 67/103 (65%)

Query:    14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT 73
             P+  +V++Q    G++ ++K A++QG +P +LA Y   +A++ + P ++FL+RK RP +T
Sbjct:     8 PFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMT 67

Query:    74 FALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
              ++  K+ +L L+  T+ Q   YTG+ ++S T  +A  N++PA
Sbjct:    68 LSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPA 110

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 43/116 (37%), Positives = 68/116 (58%)

Query:     1 MGMGVKQLVVGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPL 60
             MG GV    V LV   A++ +Q    G   +S+ A++ G + ++  VY + +A L++ P 
Sbjct:    24 MGKGVVSEKVKLV--VALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPF 81

Query:    61 SFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             ++F  +K RPPLT +LL + F L+LIGIT  Q     G+ +++PT  SA  N +PA
Sbjct:    82 AYFFEKKERPPLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPA 137

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 40/102 (39%), Positives = 61/102 (59%)

Query:    15 YAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTF 74
             + AM+ +Q    G   +S+AA++ G + L+  VY + IA L+LLP ++FL +K RP +T 
Sbjct:    21 HIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITL 80

Query:    75 ALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
               L + F L+LIGIT  Q     G+  +SPT  S+  N +PA
Sbjct:    81 NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPA 122

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 2.1e-14, P = 2.1e-14
 Identities = 44/101 (43%), Positives = 63/101 (62%)

Query:    17 AMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNR-PPLTFA 75
             AM+ V+   VGI+TL K A S+G        Y+  +ASL+LLP  FF NR +  PPL+ +
Sbjct:    20 AMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSSLPPLSVS 79

Query:    76 LLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPA 116
             +L K+ +L  +G ++  I  Y G+ +SSPTL SA NN+ PA
Sbjct:    80 ILSKIGLLGFLG-SMYVITGYIGIEYSSPTLASAINNITPA 119

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XV.1426.1 SubName- Full=Putative uncharacterized protein; (331 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	4e-19

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score = 81.2 bits (200), Expect = 4e-19
 Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 2/111 (1%)

Query: 17  AMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNR-KNRPPLTFA 75
           AM+A +   VGI+TL K A S+G        Y+  +ASL+LLP  FF NR ++ PPL+ +
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 76  LLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFR 126
           +L K+ +L  +G ++  I  Y G+ +S+PTL SA +N+ PA TF+LA+IFR
Sbjct: 77  ILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFR 126

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
PLN00411	358	nodulin MtN21 family protein; Provisional	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.73
PRK11272	292	putative DMT superfamily transporter inner membran	99.71
PRK15430	296	putative chloramphenical resistance permease RarD;	99.71
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.69
PRK11689	295	aromatic amino acid exporter; Provisional	99.66
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.6
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.59
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.57
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.46
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.43
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.4
PRK11272	292	putative DMT superfamily transporter inner membran	99.4
COG2510	140	Predicted membrane protein [Function unknown]	99.37
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.34
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.32
PRK11689	295	aromatic amino acid exporter; Provisional	99.31
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.26
PLN00411	358	nodulin MtN21 family protein; Provisional	99.26
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.18
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.16
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.08
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.98
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.89
PRK15430	296	putative chloramphenical resistance permease RarD;	98.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.87
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.72
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.69
COG2962	293	RarD Predicted permeases [General function predict	98.65
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.62
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.58
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.4
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.34
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.98
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.98
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.98
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.92
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.73
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.52
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.51
COG2962	293	RarD Predicted permeases [General function predict	97.26
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.04
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.54
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.51
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.25
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.98
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.96
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.66
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.31
KOG1443	349	consensus Predicted integral membrane protein [Fun	95.07
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.04
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.01
KOG2765	416	consensus Predicted membrane protein [Function unk	94.84
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	94.69
KOG3912	372	consensus Predicted integral membrane protein [Gen	94.67
COG2076	106	EmrE Membrane transporters of cations and cationic	94.59
PRK13499	345	rhamnose-proton symporter; Provisional	94.46
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.31
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.16
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.71
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.66
KOG2765	416	consensus Predicted membrane protein [Function unk	93.09
PRK11431	105	multidrug efflux system protein; Provisional	92.91
PRK13499	345	rhamnose-proton symporter; Provisional	92.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.72
PRK10650	109	multidrug efflux system protein MdtI; Provisional	90.92
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	87.81
KOG1581	327	consensus UDP-galactose transporter related protei	81.26

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.85  E-value=2.9e-20  Score=153.03  Aligned_cols=130  Identities=38%  Similarity=0.548  Sum_probs=117.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCCCCHHHHHHHHHHHHHHHH
Q 032161           11 GLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRK-NRPPLTFALLCKVFILSLIGIT   89 (146)
Q Consensus        11 ~~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~-~~~~~~~~~~~~l~~lgl~g~~   89 (146)
                      +.++|+.|+..++++++..++.|.+++.|++|..+.++|+.+|++++.|+.+.++|+ +.++.+++++..+.++|++| .
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence            357999999999999999999999999999999999999999999999998765543 23455688999999999999 6


Q ss_pred             HHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHH------hhHHHHHHHHHHHHHH
Q 032161           90 LMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIF------RFFFFFIFVVFYFLII  141 (146)
Q Consensus        90 ~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~------l~E~~~~~~~~~~~~~  141 (146)
                      .++.+++.|++||+|++++++.+++|++++++++++      ++|+.+...+.+.++-
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~  147 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILS  147 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHH
Confidence            888899999999999999999999999999999999      5999999999887764

>TIGR00688 rarD rarD protein

Probab=99.73  E-value=1e-16  Score=125.32  Aligned_cols=127  Identities=11%  Similarity=-0.044  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCC-----CCCCCHHH-HHHHHHHHHH
Q 032161           13 VPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKN-----RPPLTFAL-LCKVFILSLI   86 (146)
Q Consensus        13 ~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~-----~~~~~~~~-~~~l~~lgl~   86 (146)
                      |++..++++.++||.++++.|. .++ +||.++.++|+++|++++.++...+++++     .++.++++ +......|.+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999998 454 99999999999999988877654333211     11122333 3344555555


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           87 GITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        87 g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                       ...++.++++|++++++++++++.++.|+++.+++++++|||++...|++.++.+
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~  134 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIAT  134 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence             5589999999999999999999999999999999999999999999999877654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.71  E-value=6.7e-16  Score=123.26  Aligned_cols=124  Identities=14%  Similarity=0.104  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQI   93 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~   93 (146)
                      -...++...++||.+++.+|...++ +||.+++++|+.+|+++++++... +|+ + +.+++|+......|.++...++.
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~-~~~-~-~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLL-RGH-P-LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHH-hCC-C-CCcHHHHHHHHHHHHHHHHHHHH
Confidence            3456777899999999999998874 999999999999999999887644 222 2 23567888888999998778889


Q ss_pred             HHHHHh-hhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           94 CVYTGV-SFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        94 l~~~gl-~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      +++.+. +++++++++++.++.|+++.+++++ +||+++...+.+.++..
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~  133 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGL  133 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHH
Confidence            999999 9999999999999999999999986 69999999998877654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.71  E-value=2e-16  Score=126.61  Aligned_cols=129  Identities=10%  Similarity=-0.100  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC---CCCHHHHHHHHHHHHHH
Q 032161           11 GLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRP---PLTFALLCKVFILSLIG   87 (146)
Q Consensus        11 ~~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~---~~~~~~~~~l~~lgl~g   87 (146)
                      +.++++.++++.++||.+++..|.. + ++||.++.++|..+|.+++.++...+++++..   ..+++++. ....+.++
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   82 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAVL   82 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHHH
Confidence            3589999999999999999999975 5 49999999999999998888776443221110   11344443 34477788


Q ss_pred             HHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           88 ITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        88 ~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      ...++.++++|++++++++++++.++.|+++.+++++++||+++...|.+.++.+
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~  137 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAI  137 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999887654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.69  E-value=1.6e-16  Score=109.81  Aligned_cols=119  Identities=22%  Similarity=0.269  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 032161           23 CVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFS  102 (146)
Q Consensus        23 ~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~t  102 (146)
                      ++||.+.+..|...++ +||....++|+..+++ +.+.....++++.++.+++++......|.++....+.++++|++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999887 9999999999999997 6666555555433456778899999999998889999999999999


Q ss_pred             cHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161          103 SPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       103 sas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ++++++.+.++.|+++.++++++++|+++...+.+..+++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~  119 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIII  119 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999988764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.66  E-value=2.6e-15  Score=120.12  Aligned_cols=123  Identities=15%  Similarity=0.121  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      .++++.++.+.++||++++..|..+++ +||..++++|+.+|++++.++.   ++++.++   + ..+....+.++...+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---~-~~~~~~~~~l~~~~~   74 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---F-PKRYLLAGGLLFVSY   74 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc---ccccccc---c-cHHHHHHHhHHHHHH
Confidence            467889999999999999999999886 9999999999999999988752   1211111   1 222345566677788


Q ss_pred             HHHHHHHhhh----ccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           92 QICVYTGVSF----SSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        92 ~~l~~~gl~~----tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      +.+++.|+++    +++++++++.++.|+++.+++++++||+++...+.+.++.+
T Consensus        75 ~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~  129 (295)
T PRK11689         75 EICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLAL  129 (295)
T ss_pred             HHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence            8888888865    57889999999999999999999999999999999876643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.60  E-value=3.6e-14  Score=113.62  Aligned_cols=119  Identities=13%  Similarity=0.001  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQI   93 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~   93 (146)
                      ..+..+++.++||.+++.+|...++ +||..+.++|+.++++.+.++.   .+++   .+++   .....|+.+...++.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~---~~~~---~~~~---~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV---ARPK---VPLN---LLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh---cCCC---CchH---HHHHHHHHHHHHHHH
Confidence            3467889999999999999999876 9999999999999887766643   1211   2222   345556666667777


Q ss_pred             HHHHHhhh-ccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           94 CVYTGVSF-SSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        94 l~~~gl~~-tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      +++.++++ .++++++++.++.|+++.+++++++||+++...+++.++.+
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~  124 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAI  124 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHH
Confidence            88899998 48899999999999999999999999999999998877654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.59  E-value=2.2e-14  Score=111.61  Aligned_cols=111  Identities=15%  Similarity=0.082  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccH
Q 032161           25 QVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSP  104 (146)
Q Consensus        25 wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsa  104 (146)
                      ||.+++..|..+++..||.+..+.|+..+.+.+.++...  +     .+++++......|.++..+++.+++.|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            899999999998877999999999999998888776432  2     235677788999999999999999999999999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161          105 TLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus       105 s~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      ++++++.++.|+++.+++.+++||+++...+.+.++..
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~  111 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGL  111 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999998887754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.57  E-value=1.8e-13  Score=106.47  Aligned_cols=131  Identities=18%  Similarity=0.195  Sum_probs=113.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 032161           11 GLVPYAAMVAVQCVQVGITTLSKAAISQGATP--LILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGI   88 (146)
Q Consensus        11 ~~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P--~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~   88 (146)
                      +.++....++++++|+.+.+..|+..++ .||  .....+|+.++.+++.|..+..+++  +..+.+++..++.+|.++.
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence            4578899999999999999999998764 664  4555578999999999887653332  2346788888999999999


Q ss_pred             HHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           89 TLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        89 ~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      .+.+.++++++++.++++++.+.++.|+++.++++++++|++....+.+..++...
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g  258 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAA  258 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999998764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.46  E-value=3.1e-12  Score=102.27  Aligned_cols=108  Identities=11%  Similarity=0.034  Sum_probs=91.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 032161           10 VGLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGIT   89 (146)
Q Consensus        10 ~~~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~   89 (146)
                      ++.++...+++++++|+.+.+.+|.+.++ +||..+.++|+.+|++++.++..  +++  ++.++|++......|.+. .
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~--~~~--~~~~~~~~~~~~~~g~~~-~   82 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFK--PWR--LRFAKEQRLPLLFYGVSL-G   82 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHh--HHh--ccCCHHHHHHHHHHHHHH-H
Confidence            45688999999999999999999999987 99999999999999998887642  222  134568888888888775 4


Q ss_pred             HHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHH
Q 032161           90 LMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAV  123 (146)
Q Consensus        90 ~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~  123 (146)
                      ..+.++++++++++++.++++..+.|+++.+++.
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~  116 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS  116 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence            6678899999999999999999999999998873

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.43  E-value=3.9e-12  Score=101.79  Aligned_cols=112  Identities=17%  Similarity=0.155  Sum_probs=94.0

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHH
Q 032161           30 TLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSA  109 (146)
Q Consensus        30 v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsas~asi  109 (146)
                      +.-|+++++--+|..+++.|+.++.+.+.+. +..+.+++++.+++|+..++..|+++ +.++.+.+.|++|++++++++
T Consensus        19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~l   96 (302)
T TIGR00817        19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHT   96 (302)
T ss_pred             HHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHH
Confidence            4679998764679999999999998776554 21122233456789999999999997 688899999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161          110 TNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       110 i~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +.++.|+++.+++++++||+++...+.+.++...
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~  130 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVG  130 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            9999999999999999999999999998887653

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.40  E-value=1.7e-11  Score=98.01  Aligned_cols=129  Identities=13%  Similarity=0.115  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      ..+.+..++++++|+.+.+..|+..++ .+|..... ...++++.+.|+......  ....++..+...+.+|++++.+.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            357889999999999999999998654 88888754 456667777777654322  12245556666789999999999


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      +.+|++++++.+|++++.+.++.|+++.++++++++|++....+.+..+++.+
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~  275 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAA  275 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988753

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.40  E-value=1.3e-11  Score=98.50  Aligned_cols=131  Identities=11%  Similarity=-0.003  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      ..+.+..++++++|+.+.+..|+..+  -++....+++..+++..+.++....+.......+.++|..+.++|++++.+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            45788899999999999999998643  3456677899999988888876543322111235678989999999999999


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      +.+|++++++.++++++.+.++.|++++++++++++|+++...+.+..+++.+
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~g  279 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFA  279 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888653

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.37  E-value=7.1e-12  Score=89.09  Aligned_cols=128  Identities=9%  Similarity=0.054  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRP-PLTFALLCKVFILSLIGITLMQ   92 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~-~~~~~~~~~l~~lgl~g~~~~~   92 (146)
                      ..+..++++++||...++.|+.+++ +||...++.|-.+...++..+.+..++.+.+ ..++|.|..+.+-|+-+. ..-
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~g-lsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGG-LSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHH-HHH
Confidence            4577889999999999999999975 9999999999999988888877664443332 357888988888887665 666


Q ss_pred             HHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           93 ICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        93 ~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+||.+++.-.++...-+..+.|+++.++++++++|+.+..-|.+.++|..
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~  132 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVI  132 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999999864

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.34  E-value=7.2e-11  Score=96.95  Aligned_cols=115  Identities=15%  Similarity=0.166  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 032161           26 VGITTLSKAAISQGAT-PLILAVYADAIASLILLPLSFFLNRKNRPPL--TFALLCKVFILSLIGITLMQICVYTGVSFS  102 (146)
Q Consensus        26 g~~~v~~K~~l~~g~~-P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~--~~~~~~~l~~lgl~g~~~~~~l~~~gl~~t  102 (146)
                      ..+....|.++++ +| |.+++.+|++++.++...+. ..+.++.|+.  .++++..++.+|+++...+ ...+.|++++
T Consensus        62 ~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~-~~~~~sl~~~  138 (350)
T PTZ00343         62 VLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLCHLFVH-FGAVISMGLG  138 (350)
T ss_pred             HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhc
Confidence            3445678999887 99 99999999999987655442 2222222333  2457889999999998765 4467999999


Q ss_pred             cHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161          103 SPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       103 sas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +++.++++.++.|++++++++++++|+.+...+.+.+++..
T Consensus       139 svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~  179 (350)
T PTZ00343        139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVG  179 (350)
T ss_pred             cHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999888754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.32  E-value=4.9e-11  Score=94.70  Aligned_cols=124  Identities=14%  Similarity=0.117  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 032161           15 YAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLN-RKNRPPLTFALLCKVFILSLIGITLMQI   93 (146)
Q Consensus        15 ~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~-~~~~~~~~~~~~~~l~~lgl~g~~~~~~   93 (146)
                      ....+.++++|+...+.+|...++ -++.  ..++...+++++.|+...+. ++++++.+ +++......+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence            456778999999999999976654 3443  57788888888888765432 22222233 4445566667777789999


Q ss_pred             HHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           94 CVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        94 l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      ++++|++++++++++.+.++.|+++.+++++++||+++...|.+..++.
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~  127 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIIT  127 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.31  E-value=1e-10  Score=93.64  Aligned_cols=126  Identities=10%  Similarity=0.113  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 032161           13 VPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQ   92 (146)
Q Consensus        13 ~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~   92 (146)
                      .+.+..++++++|+.+.+..|+..+ +.||....   +..+++.+.+.....+ ......+.+.|..+++.|+ ...+.+
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~---~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~~  229 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLF---FILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFGY  229 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHH---HHHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHHH
Confidence            4778999999999999999999765 48887653   2334444444333322 1112355677888887774 567889


Q ss_pred             HHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           93 ICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        93 ~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      .+|++++++.+|++++.+.++.|+++.++++++++|+++...+.+.++|+.+
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~g  281 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAG  281 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999998764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.26  E-value=5.5e-10  Score=89.47  Aligned_cols=133  Identities=11%  Similarity=0.083  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhcCC-----CCCCCHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQG--ATPLILAVYADAIASLILLPLSFFLNRKN-----RPPLTFALLCKVFILS   84 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g--~~P~~l~~~R~~iA~l~l~~~~~~~~~~~-----~~~~~~~~~~~l~~lg   84 (146)
                      ..+.+..+.++++|+.+.+..|...++.  .+......+....+.+.+....+..+...     ....+.++|..++++|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            3577889999999999999999875431  22234445555555444433333222211     1234678899999999


Q ss_pred             HHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           85 LIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        85 l~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      ++++.+.+.++++++++.+|++++.+.++.|++..++++++++|+++...+.+..+++.+
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~g  281 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAG  281 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999888753

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.26  E-value=3.5e-10  Score=93.37  Aligned_cols=127  Identities=11%  Similarity=0.115  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHhhhhcCCC----CCCCHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATP-LILAVYADAIASLILLPLSFFLNRKNR----PPLTFALLCKVFILSLIGI   88 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P-~~l~~~R~~iA~l~l~~~~~~~~~~~~----~~~~~~~~~~l~~lgl~g~   88 (146)
                      +...++.++++|+.+.+..|...++ .|| ...+++...++++.+.+.....++...    ...+.. ...+++.|+. .
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-t  266 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-T  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-H
Confidence            5577888999999999999998765 655 466778877777666655554333211    112222 3335566655 4


Q ss_pred             HHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           89 TLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        89 ~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+.+.++++++++.+|+.++.+.++.|++++++++++++|+++...+++.++|+.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~  321 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL  321 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            5788899999999999999999999999999999999999999999999998875

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.18  E-value=1.7e-09  Score=84.15  Aligned_cols=129  Identities=22%  Similarity=0.242  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      .......++..+.|+.+....|...++..++......|+..+.....+...  +++...+...+++....+.+.++...+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL--LEPRGLRPALRPWLLLLLLALLGLALP   83 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH--hhcccccccccchHHHHHHHHHHHHHH
Confidence            356778888889999999999998765366677777799999887444322  211111122233556778888888899


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHH-HHhhHHHHHHHHHHHHHHH
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAV-IFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~-l~l~E~~~~~~~~~~~~~~  142 (146)
                      +.+++.+++++++++++.+.++.|+++.+++. ++++|++....+.+.++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~  135 (292)
T COG0697          84 FLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLAL  135 (292)
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999997 7779999999999866543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.16  E-value=2.5e-10  Score=91.32  Aligned_cols=132  Identities=14%  Similarity=0.102  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCC---------CHHH-HHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQ-GATPLILAVYADAIASLILLPLSFFLNRKNRPPL---------TFAL-LCKV   80 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~-g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~---------~~~~-~~~l   80 (146)
                      ..+.+..++++++|+.+.+..|+..++ ++||.++..+....+++.+.|+.+..+.......         +... +...
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            457888999999999999999998751 4999999999999999999998765432111000         0001 1112


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           81 FILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        81 ~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +..+......++.+++.++++++|+++++..++.|++++++++++++|+++...+++..+++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~  286 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIA  286 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHH
Confidence            233332333455677789999999999999999999999999999999999999999999875

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.08  E-value=5.6e-10  Score=77.61  Aligned_cols=96  Identities=22%  Similarity=0.266  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHH
Q 032161           47 VYADAIASLILLPLSFFLNRKNR--PPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVI  124 (146)
Q Consensus        47 ~~R~~iA~l~l~~~~~~~~~~~~--~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l  124 (146)
                      .+|...+.+++..+....+|.+.  +..+++++.+....|.++...++.++++|+++++ +..+.+.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            68999999988887766333211  1223456677777888888889999999999999 58889999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHHh
Q 032161          125 FRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       125 ~l~E~~~~~~~~~~~~~~~  143 (146)
                      ++||++....+.+..++..
T Consensus        81 ~~~er~~~~~~~a~~l~~~   99 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILI   99 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHH
Confidence            9999999999999887753

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.98  E-value=2.2e-09  Score=85.25  Aligned_cols=131  Identities=15%  Similarity=-0.014  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH----HHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLI----LAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIG   87 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~----l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g   87 (146)
                      .++....++++++|+.+.+..|...+ +.+|..    ...+.....++.+.+.....++ +....+.+++......+.++
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  220 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAAL-GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG-RSMFPYARQILPSATLGGLM  220 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhcccccc-chhcccccHHHHHHHHHHHHHHHHHHHHHHhc-cchhhhHHHHHHHHHHHHHH
Confidence            34566788899999999999997643 255432    3333433332222222211121 11111223445567788888


Q ss_pred             HHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           88 ITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        88 ~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      ..+.+.++++++++.++++++...++.|+++.++++++++|+++...+.+..+++..
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~G  277 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAG  277 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999999999999999988753

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.89  E-value=1.2e-07  Score=77.91  Aligned_cols=134  Identities=14%  Similarity=0.104  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--------CCCHH
Q 032161           10 VGLVPYAAMVAVQCVQVGITTLSKAAISQ------GATPLILAVYADAIASLILLPLSFFLNRKNRP--------PLTFA   75 (146)
Q Consensus        10 ~~~~~~l~ll~~~~~wg~~~v~~K~~l~~------g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~--------~~~~~   75 (146)
                      .+..+.+..++++++|+...+..|..+++      .+++..+..+...+++++++|+....+..+..        ..+..
T Consensus       191 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~  270 (350)
T PTZ00343        191 FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNY  270 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhccccc
Confidence            34568889999999999999999998764      26687777777889999999987644321100        00011


Q ss_pred             HHHHHH---HHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           76 LLCKVF---ILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        76 ~~~~l~---~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+..+.   +.+.+...+++...+.++++++|.++++..++-|+++.++++++++|+++...+.|..+++.
T Consensus       271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~  341 (350)
T PTZ00343        271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAIL  341 (350)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHH
Confidence            111222   22222233333344469999999999999999999999999999999999999999988865

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.89  E-value=7.1e-08  Score=77.21  Aligned_cols=127  Identities=13%  Similarity=0.072  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 032161           16 AAMVAVQCVQVGITTLSKAAISQG-ATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQIC   94 (146)
Q Consensus        16 l~ll~~~~~wg~~~v~~K~~l~~g-~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l   94 (146)
                      ...++++++|+.+.+..|...++. .++.....+...++.....+.... ........+...+..+...|+ ...+.+.+
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~  229 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADS-STSHMGQNPMSLNLLLIAAGI-VTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccC-CcccccCCcHHHHHHHHHHHH-HHHHHHHH
Confidence            356778899999999999864321 233444455555554443332110 000011112233344444555 45588899


Q ss_pred             HHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           95 VYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        95 ~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      +++++++.+|+.++.+.++.|++..++++++++|+++...+.+..+|+.+
T Consensus       230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~  279 (296)
T PRK15430        230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVA  279 (296)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999988888543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.87  E-value=2.1e-07  Score=72.36  Aligned_cols=127  Identities=20%  Similarity=0.187  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAV-YADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITL   90 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~-~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~   90 (146)
                      ..+....+.+.++|+.+.+..|... + .++..... +....+.....+..  ..... ...+.+++......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            3678889999999999999999876 4 77877777 55553333333332  12111 235668899999999999888


Q ss_pred             HHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           91 MQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        91 ~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+.++++++++.+++..+.+..+.|++..++++++++|+++..-+.+..++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~  280 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL  280 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999877654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.72  E-value=1.1e-06  Score=63.11  Aligned_cols=128  Identities=21%  Similarity=0.305  Sum_probs=105.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC----CC-------CHHHH
Q 032161           15 YAAMVAVQCVQVGITTLSKAAISQ------GATPLILAVYADAIASLILLPLSFFLNRKNRP----PL-------TFALL   77 (146)
Q Consensus        15 ~l~ll~~~~~wg~~~v~~K~~l~~------g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~----~~-------~~~~~   77 (146)
                      .+..+.+.++-+...+..|..+++      +.||.++..+-...+++++.|..+..++.+..    ..       +.+.+
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            466788999999999999998866      79999999999999999999988776654310    00       22334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           78 CKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        78 ~~l~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ..++..|+++. .++...+.-++++||...++..+.-.+.+.++++++.+|+++...+.++++.+.
T Consensus        82 ~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~  146 (153)
T PF03151_consen   82 FLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALV  146 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHH
Confidence            44555566654 888899999999999999999999999999999999999999999999998765

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.69  E-value=8.5e-07  Score=71.12  Aligned_cols=119  Identities=12%  Similarity=0.084  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHH---HHHH
Q 032161           15 YAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIG---ITLM   91 (146)
Q Consensus        15 ~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g---~~~~   91 (146)
                      .+..++++++||.+.+..|..-  |.+|.+..  |..++.+++..+....++   ++.+   .......|+++   -...
T Consensus         3 ~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~---~~~~---~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         3 ILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL---PEFW---ALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             hHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC---Cccc---ccHHHHHHHHHHHHHHhh
Confidence            5778889999999999999864  68888776  888888776665444222   1122   12334444444   4566


Q ss_pred             HHHHHHHhhhccHHHHHHHHh-hHHHHHHHHHHHHhhHHHHHHH----HHHHHHHHh
Q 032161           92 QICVYTGVSFSSPTLVSATNN-LIPAFTFLLAVIFRFFFFFIFV----VFYFLIILL  143 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~-l~Pv~t~lla~l~l~E~~~~~~----~~~~~~~~~  143 (146)
                      |.+++.+.++++.+.+-.+.+ +.|++..+.+.+++||+.....    ..+.++++.
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~  129 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIII  129 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence            799999999999999998887 8999999999999999988777    666666654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.65  E-value=9e-07  Score=70.83  Aligned_cols=127  Identities=12%  Similarity=-0.072  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CCCCHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNR---PPLTFALLCKVFILSLIGI   88 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~---~~~~~~~~~~l~~lgl~g~   88 (146)
                      .++.+..+.+-++||..+...|.. ++ .|+.++.+.|.+-+...+.......++.+.   ...++|.+....+.+.. .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            478999999999999999999975 55 999999999999998777766554333221   12344556655555555 4


Q ss_pred             HHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 032161           89 TLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLII  141 (146)
Q Consensus        89 ~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~  141 (146)
                      +++-..|.++.+.-..-++|+=...+|++.++++.+++||+++..-|....+-
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA  135 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLA  135 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence            47888999999999999999999999999999999999999999888776553

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.62  E-value=5e-07  Score=72.43  Aligned_cols=123  Identities=9%  Similarity=-0.045  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADA----IASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIG   87 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~----iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g   87 (146)
                      .++....+++.+.|+.+.+..|..  + .||.+.++.+..    .+.++..+.    + +.+|..+...+ ..+..|++ 
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~----~-~~~~~~~~~~~-~~~~~Gi~-  220 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH----I-LAKPLKKYAIL-LNILPGLM-  220 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH----h-cccchHHHHHH-HHHHHHHH-
Confidence            578899999999999999999975  3 899998666554    444443332    1 11222223333 34448888 


Q ss_pred             HHHHHHHHHHHhh-hccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH----HHHHHHHhc
Q 032161           88 ITLMQICVYTGVS-FSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVV----FYFLIILLS  144 (146)
Q Consensus        88 ~~~~~~l~~~gl~-~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~----~~~~~~~~~  144 (146)
                      ....+.+|+.|.+ +.+++.++.+.+..|+...+.+++++||+....-+    .+.++|+.+
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~  282 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIA  282 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHH
Confidence            5788899999999 99999999999999999999999999999988777    888777653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.58  E-value=1.1e-06  Score=69.30  Aligned_cols=130  Identities=14%  Similarity=0.043  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      ..+....+.+..||+.|-+.+|.+-+. -|--+-+..-+.+|+++.+|+..-+....  -.+++-...-+..|++.+.+.
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhcccc
Confidence            356778889999999999999998644 56667778889999999999976432221  245555666678999999999


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      +.+...++++.++..-+++.++-|.+.++.++++++|..+.--|..+..+...
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaA  276 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAA  276 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999887643

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.40  E-value=3.6e-05  Score=63.27  Aligned_cols=130  Identities=18%  Similarity=0.224  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHhhhhcC-CCCCCCHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQ---CVQVGITTLSKAAISQGAT-PLILAVYADAIASLILLPLSFFLNRK-NRPPLTFALLCKVFILSLI   86 (146)
Q Consensus        12 ~~~~l~ll~~~---~~wg~~~v~~K~~l~~g~~-P~~l~~~R~~iA~l~l~~~~~~~~~~-~~~~~~~~~~~~l~~lgl~   86 (146)
                      ++-...+++.+   ++-.++.+......++|.+ |..-.++-...=.++..+...+++++ +..+..+++|.+.+++|++
T Consensus         9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~   88 (334)
T PF06027_consen    9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH
Confidence            33444444433   4556666666666555655 44444444433333444443333322 2223335677788889998


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           87 GITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        87 g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      -+ ..+.+.+.|.+||+.+.+.++..+.-.++++++++++|||.+...+.+.++.+
T Consensus        89 Dv-~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i  143 (334)
T PF06027_consen   89 DV-EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICI  143 (334)
T ss_pred             HH-HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            77 66688899999999999999999999999999999999999999999887764

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=98.34  E-value=2.3e-05  Score=61.19  Aligned_cols=102  Identities=11%  Similarity=0.087  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh----hhhcCCCCC-CCHHHHHHHHHHHHHHHHH
Q 032161           16 AAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF----FLNRKNRPP-LTFALLCKVFILSLIGITL   90 (146)
Q Consensus        16 l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~----~~~~~~~~~-~~~~~~~~l~~lgl~g~~~   90 (146)
                      ...+.++++|+.+.+..|...++  |+.......     ....|...    .......+. ...++|..++.+|++ +..
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i  220 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-----LSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGT  220 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-----HHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH-HHH
Confidence            34677899999999999986432  333222222     22222221    111110111 123588888999987 568


Q ss_pred             HHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHH
Q 032161           91 MQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIF  125 (146)
Q Consensus        91 ~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~  125 (146)
                      .+.++++|+++.+|+.++.+.++.|+++.+++.+.
T Consensus       221 ~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       221 PLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.98  E-value=6.5e-05  Score=52.32  Aligned_cols=63  Identities=13%  Similarity=-0.110  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           81 FILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        81 ~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ...++.+....+.++..++++.+.+.+..+.++.|+.+.+.++++++|+++...+.+..+|..
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~  102 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG  102 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            344557777899999999999999999999999999999999999999999999999988763

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.98  E-value=0.0002  Score=58.95  Aligned_cols=131  Identities=11%  Similarity=0.077  Sum_probs=98.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC--HHHHHHHHHHHHHHH
Q 032161           11 GLVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLT--FALLCKVFILSLIGI   88 (146)
Q Consensus        11 ~~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~--~~~~~~l~~lgl~g~   88 (146)
                      ..++.+.++.++++||.+.+..++..++ .|+.+....=-+.+.++..+.....++++..+.+  .+....+ ....++.
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~-v~~~~~l  243 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLL-VGYALCL  243 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHH-HHHHHHH
Confidence            3578899999999999999999999886 7888877666667777777666555665543333  3333222 2222344


Q ss_pred             HHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           89 TLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        89 ~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ...+.+....+++++|+...+=.-+....+.++++++.+|+++..-..+|.+|..
T Consensus       244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIii  298 (334)
T PF06027_consen  244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIII  298 (334)
T ss_pred             HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence            5566677888999999877776678899999999999999999988888888764

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.98  E-value=1.1e-06  Score=69.93  Aligned_cols=116  Identities=20%  Similarity=0.207  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 032161           23 CVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFS  102 (146)
Q Consensus        23 ~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~t  102 (146)
                      ..+..+.+..+..++  .||.+....|++.--++-.|-....+..-.-+...|.|  +++=|+.|.++. ...|++++|.
T Consensus        47 ~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~--LiLRg~mG~tgv-mlmyya~~~m  121 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKW--LILRGFMGFTGV-MLMYYALMYM  121 (346)
T ss_pred             HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEE--EEeehhhhhhHH-HHHHHHHhhc
Confidence            555555565555554  69999999997666555555443322211111122323  333344444333 4456999999


Q ss_pred             cHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161          103 SPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       103 sas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +-++|++|+...|++|.++|++++||+.+.+-.++.++-++
T Consensus       122 slaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~  162 (346)
T KOG4510|consen  122 SLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLL  162 (346)
T ss_pred             chhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhh
Confidence            99999999999999999999999999999999998877654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.92  E-value=0.00034  Score=50.05  Aligned_cols=111  Identities=17%  Similarity=0.071  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQI   93 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~   93 (146)
                      +++.++...++=+..-+.-|+..++ .++.+.... . .      ..... .      .+   -...+++|+.+..+.+.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~------~~~~~-~------~~---p~~~i~lgl~~~~la~~   63 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I------AALLA-F------GL---ALRAVLLGLAGYALSML   63 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H------HHHHH-H------hc---cHHHHHHHHHHHHHHHH
Confidence            5777888888888888899998865 443332221 1 0      10000 0      01   11257888899999999


Q ss_pred             HHHHHhhhccHHHHHHHHhhHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHh
Q 032161           94 CVYTGVSFSSPTLVSATNNLIPAFTFLLAVI--FRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        94 l~~~gl~~tsas~asii~~l~Pv~t~lla~l--~l~E~~~~~~~~~~~~~~~  143 (146)
                      +++.++++.+++.+.-+.+..|+.+.+.++.  +++|+++...+++..+|..
T Consensus        64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~  115 (129)
T PRK02971         64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIML  115 (129)
T ss_pred             HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999888885  8999999999999998864

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.73  E-value=0.0012  Score=52.49  Aligned_cols=113  Identities=18%  Similarity=0.085  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQI   93 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~   93 (146)
                      +++.+..+++.-=...-+.|..... +.|...+++|..++++++.++.  +.+  +.|.+++|+..+...|..-. ..|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~--RPw--r~r~~~~~~~~~~~yGvsLg-~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF--RPW--RRRLSKPQRLALLAYGVSLG-GMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh--hHH--HhccChhhhHHHHHHHHHHH-HHHH
Confidence            5777777666555556677888887 9999999999999999998863  222  34577889999999888755 4567


Q ss_pred             HHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHH
Q 032161           94 CVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFI  132 (146)
Q Consensus        94 l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~  132 (146)
                      +||.++++.+=+.+..+-.+-|+.+..++.==.++.+-+
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr~~d~vwv  125 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRRLRDFVWV  125 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhccchhhHHHH
Confidence            888999999999999999999999988876555554333

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.52  E-value=0.0042  Score=49.89  Aligned_cols=129  Identities=16%  Similarity=0.161  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhh--hhc-CCC---CCCCHHHHHHHHHHHHH
Q 032161           14 PYAAMVAVQCVQVGITTLSKAAIS-QGATPLILAVYADAIASLILLPLSFF--LNR-KNR---PPLTFALLCKVFILSLI   86 (146)
Q Consensus        14 ~~l~ll~~~~~wg~~~v~~K~~l~-~g~~P~~l~~~R~~iA~l~l~~~~~~--~~~-~~~---~~~~~~~~~~l~~lgl~   86 (146)
                      +.+.++++.++-|...+..++..+ ++.+|.+..++-.+.+.+...+....  .+. ++.   ...+++.+..++..++.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            788999999999999999999884 46999999999999998877776654  111 111   01123345555666666


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           87 GITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        87 g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +. ..+.+.+.-.+..+|...+++.++--.++.++++++.+++++..-|.++++...
T Consensus       235 ~~-~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~  290 (303)
T PF08449_consen  235 GA-LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFA  290 (303)
T ss_pred             HH-HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHH
Confidence            65 555566678999999999999999999999999999999999999999998764

; GO: 0055085 transmembrane transport

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.51  E-value=0.0074  Score=48.44  Aligned_cols=112  Identities=17%  Similarity=0.106  Sum_probs=83.0

Q ss_pred             HHHHHHHHHh-CCCC--HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccH
Q 032161           28 ITTLSKAAIS-QGAT--PLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSP  104 (146)
Q Consensus        28 ~~v~~K~~l~-~g~~--P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsa  104 (146)
                      +.+....... ++-+  |..+++.++....+.-.+.....++++.   +++.+......+++- .+...+-+.+++|.+.
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCCh
Confidence            3344444443 3345  8999999999988776665433221222   223344556666554 3677888999999999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161          105 TLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus       105 s~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ..-.++-+..|+.+++++.+++|++.....+++.+++..
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~  129 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITI  129 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHh
Confidence            999999999999999999999999999999999988764

; GO: 0055085 transmembrane transport

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.26  E-value=0.016  Score=46.77  Aligned_cols=120  Identities=16%  Similarity=0.058  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 032161           20 AVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKN--RPPLTFALLCKVFILSLIGITLMQICVYT   97 (146)
Q Consensus        20 ~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~--~~~~~~~~~~~l~~lgl~g~~~~~~l~~~   97 (146)
                      ..++-||.++..=|..   ++|+.+=...-.+.-...-+.+.++.+...  ...-+.+++..+...|... ++.-.+|..
T Consensus       155 ~la~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT-avpL~lf~~  230 (293)
T COG2962         155 ALALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT-AVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH-HHHHHHHHH
Confidence            3455677777777763   367766555444443332222222222211  1112456777777788775 589999999


Q ss_pred             HhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           98 GVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        98 gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      |-++.+=+.-+++++..|.+..++++++++|++..-..++|..|-+
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~  276 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWL  276 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998887743

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.04  E-value=0.00018  Score=57.62  Aligned_cols=127  Identities=13%  Similarity=0.089  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 032161           13 VPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQ   92 (146)
Q Consensus        13 ~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~   92 (146)
                      ++..+.+..++.-+..++..|+.-++ .|......+=-.++.+.-....-....-+.| -.+|||..+..+|++|. +.|
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~-~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lGvfgf-igQ  267 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKN-AHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLGVFGF-IGQ  267 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhcc-ccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEehhhhh-HHH
Confidence            34556666666667777888876333 5554444444444433222221111222333 46788888889999986 899


Q ss_pred             HHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           93 ICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        93 ~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      ++...|+|.--|+..+++.++.-++..++-+++.+|..+++.|-+-+.+.
T Consensus       268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vv  317 (346)
T KOG4510|consen  268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVV  317 (346)
T ss_pred             HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeee
Confidence            99999999999999999999999999999999999999999998766543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.74  E-value=0.01  Score=39.81  Aligned_cols=57  Identities=14%  Similarity=-0.046  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHHhhhccHHHHHH-HHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 032161           85 LIGITLMQICVYTGVSFSSPTLVSA-TNNLIPAFTFLLAVIFRFFFFFIFVVFYFLII  141 (146)
Q Consensus        85 l~g~~~~~~l~~~gl~~tsas~asi-i~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~  141 (146)
                      +.+....+.++..++++.+.+.+-- ...+..+.+.+.++.+.+|+++...++++.+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3455567788999999999999954 56799999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.54  E-value=0.018  Score=45.27  Aligned_cols=70  Identities=11%  Similarity=0.092  Sum_probs=63.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           73 TFALLCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        73 ~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ++||...+.+-+++- ...+.+.+.++++.+|+.-.++.++-.++|++++++++|++++..-|.+.++...
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~   82 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVA   82 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence            467788888888874 5888899999999999999999999999999999999999999999999988764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.51  E-value=0.33  Score=40.20  Aligned_cols=129  Identities=16%  Similarity=0.158  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhcC--CC--CC------CCHHHHHH
Q 032161           13 VPYAAMVAVQCVQVGITTLSKAAISQG---ATPLILAVYADAIASLILLPLSFFLNRK--NR--PP------LTFALLCK   79 (146)
Q Consensus        13 ~~~l~ll~~~~~wg~~~v~~K~~l~~g---~~P~~l~~~R~~iA~l~l~~~~~~~~~~--~~--~~------~~~~~~~~   79 (146)
                      ..++.++...+-+++.....|+.-...   +.|.+..+.--.+-.++.....+..+|+  +.  ..      .+++|...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            457888888999999999999986554   7788888888777776666665554322  11  11      13456666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           80 VFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        80 l~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      +.+=+++- ++.+-+++.++.+.+|+.-.+..++=-+.|++++.++++++.+.+-|...++..
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~  156 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLF  156 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            66666664 466679999999999999999999999999999999999999999988766543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.25  E-value=0.028  Score=45.98  Aligned_cols=103  Identities=18%  Similarity=0.178  Sum_probs=77.4

Q ss_pred             HHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHH
Q 032161           30 TLSKAAIS--QGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTGVSFSSPTLV  107 (146)
Q Consensus        30 v~~K~~l~--~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~~tsas~a  107 (146)
                      +..|+.++  +.--|.+++..+...+.+.+...-.+...+..+..++..+..++-+|++-. +...+-+.++++.+.+..
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~-~~~v~~n~Sl~~v~VsF~  112 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC-ISHVLGNVSLSYVPVSFY  112 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH-HHHHhcchhhhccchhHH
Confidence            46788887  556789999998888877766654332222222223455677777887754 566788899999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhhHHHHHH
Q 032161          108 SATNNLIPAFTFLLAVIFRFFFFFIF  133 (146)
Q Consensus       108 sii~~l~Pv~t~lla~l~l~E~~~~~  133 (146)
                      -.+=++.|.++.++++++.+|+...-
T Consensus       113 q~iKa~~P~~tvl~~~~~~~~~~s~~  138 (316)
T KOG1441|consen  113 QTIKALMPPFTVLLSVLLLGKTYSSM  138 (316)
T ss_pred             HHHHhhcchhHHHHHHHHhCCCCcce
Confidence            99999999999999999999987643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.98  E-value=0.21  Score=40.05  Aligned_cols=114  Identities=8%  Similarity=-0.113  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      .|+.+.++++.+.|..+....|..   ++||.+...=+...-.+.-..+.... +  .+..+++.|.. ++-|++-. ..
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~--~~~~~k~~~~n-il~G~~w~-ig  208 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-K--KPFFEKKSWKN-ILTGLIWG-IG  208 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-c--ccccccchHHh-hHHHHHHH-HH
Confidence            568889999999999999999873   38888877755332222212222221 1  11233344444 45555544 56


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHH
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIF  133 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~  133 (146)
                      +.+++.+.+..+.+.+-.+..+.++...+.+.+++||+=...
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            678899999999999999999999999999999999985544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.96  E-value=0.015  Score=47.51  Aligned_cols=135  Identities=13%  Similarity=0.185  Sum_probs=102.5

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHH-HHHhhhhcCCC----C-CCCHHH
Q 032161            6 KQLVVGLVPYAAMVAVQCVQVGITTLSKAAIS---QGATPLILAVYADAIASLILL-PLSFFLNRKNR----P-PLTFAL   76 (146)
Q Consensus         6 ~~~~~~~~~~l~ll~~~~~wg~~~v~~K~~l~---~g~~P~~l~~~R~~iA~l~l~-~~~~~~~~~~~----~-~~~~~~   76 (146)
                      .|...++.+.+....+.+..+...+..|..+.   +.+|++.+..+.--++...++ |+....+....    . ..+.. 
T Consensus       156 ~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-  234 (316)
T KOG1441|consen  156 TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-  234 (316)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-
Confidence            45557788999999999999999999999983   359999999999999999998 87665443221    1 12222 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           77 LCKVFILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        77 ~~~l~~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      .....+.+.+ ...+|...|..+.+|||.+-++....==.++...++++++|++++--++|..+-+
T Consensus       235 ~~~~~~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai  299 (316)
T KOG1441|consen  235 FLILLLNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAI  299 (316)
T ss_pred             hHHHHHHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHH
Confidence            3344555544 4567788889999999999888887767777788888888888888888877654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.66  E-value=0.27  Score=39.99  Aligned_cols=114  Identities=19%  Similarity=0.159  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHh---CCC----CHHHHHHHHHHHHHHHHHHHHhhhhcCCCC---------------CCCHHHHHHHHHH
Q 032161           26 VGITTLSKAAIS---QGA----TPLILAVYADAIASLILLPLSFFLNRKNRP---------------PLTFALLCKVFIL   83 (146)
Q Consensus        26 g~~~v~~K~~l~---~g~----~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~---------------~~~~~~~~~l~~l   83 (146)
                      ..|.+..|++-+   +|-    +|..-+..-|+.-++|+..+...+.|.+.+               +.+++....=.++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~   95 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC   95 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence            467788888732   233    367667777777788888877665443211               2222222222334


Q ss_pred             HHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           84 SLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        84 gl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      -+.|+    .+.|.|+.+|+|+.--.+-...-+||.+++.-+++.++.-..|++++-+.+
T Consensus        96 Di~gs----slm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~l  151 (372)
T KOG3912|consen   96 DIAGS----SLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSL  151 (372)
T ss_pred             HHhhh----HHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHh
Confidence            44454    667799999999999999999999999999999999999999999876543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.31  E-value=0.072  Score=37.31  Aligned_cols=105  Identities=10%  Similarity=-0.022  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 032161           19 VAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVYTG   98 (146)
Q Consensus        19 l~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~~g   98 (146)
                      +++.++||.+.++.|...+. .++..-.. |..-....     .+        .+++.+.     .+.-.-...+.|+..
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll--------~n~~y~i-----pf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LL--------LNPKYII-----PFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HH--------HhHHHHH-----HHHHHHHHHHHHHHH
Confidence            45789999999999999764 55554432 32211111     00        1222221     222233344778899


Q ss_pred             hhhccHHHHHHHH-hhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           99 VSFSSPTLVSATN-NLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        99 l~~tsas~asii~-~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +..++-+.+.-+. ++.=++|++.++++.+|......+.+..+++.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~  107 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILA  107 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHc
Confidence            9999999999885 78899999999999999999889999988864

Many members are annotated as potential transmembrane proteins.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=95.07  E-value=0.08  Score=43.30  Aligned_cols=71  Identities=18%  Similarity=0.192  Sum_probs=57.8

Q ss_pred             CCCHHHHHHHH-HHHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           71 PLTFALLCKVF-ILSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        71 ~~~~~~~~~l~-~lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      +.+|+|..+-+ -.|+. +++.-.+-+++++|++-+--+..=+..|+|+.+++.+|.-|++..++++-.++|-
T Consensus        77 ~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~  148 (349)
T KOG1443|consen   77 VLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIA  148 (349)
T ss_pred             CCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            45677765433 44444 4577888899999999998888889999999999999999999999988777663

>TIGR00803 nst UDP-galactose transporter

Probab=95.04  E-value=0.52  Score=35.87  Aligned_cols=56  Identities=14%  Similarity=0.044  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           89 TLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        89 ~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      ...+.+..+-+++.++..-+...++.++++.+++.++.+|+++...|++..+.+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~  218 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLA  218 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHee
Confidence            34556778999999999999999999999999999999999999999999887754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.01  E-value=0.89  Score=32.66  Aligned_cols=122  Identities=10%  Similarity=0.084  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 032161           18 MVAVQCVQVGITTLSKAAISQGA-TPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQICVY   96 (146)
Q Consensus        18 ll~~~~~wg~~~v~~K~~l~~g~-~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~~l~~   96 (146)
                      .+.+..+-+.....--..-++ . ||..-++.-+..+++.+..+....++++.++.+..+|. ...-|++|. .+-.+..
T Consensus         6 a~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~-~~V~~~~   82 (138)
T PF04657_consen    6 ALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGV-FFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHH-HHHHHHH
Confidence            334444444433333332222 4 59999999999999888877666554322222222232 333666665 7777888


Q ss_pred             HHhhhccHHHHHHHHh-hHHHHHHHHHHH----HhhHHHHHHHHHHHHHHH
Q 032161           97 TGVSFSSPTLVSATNN-LIPAFTFLLAVI----FRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        97 ~gl~~tsas~asii~~-l~Pv~t~lla~l----~l~E~~~~~~~~~~~~~~  142 (146)
                      ...+..+++++....- -+=+...++.++    ..+++++.....+..+++
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i  133 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMI  133 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHH
Confidence            9999999999887754 445555666664    456777777777776654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.84  E-value=0.096  Score=43.87  Aligned_cols=51  Identities=20%  Similarity=0.292  Sum_probs=47.3

Q ss_pred             HHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 032161           90 LMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLI  140 (146)
Q Consensus        90 ~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~  140 (146)
                      ..++.++.++++|+++..+++.++.-+||..+|.++..|+++..+++.-.+
T Consensus       171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~  221 (416)
T KOG2765|consen  171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFV  221 (416)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHH
Confidence            667889999999999999999999999999999999999999999987554

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=94.69  E-value=0.19  Score=35.49  Aligned_cols=61  Identities=16%  Similarity=0.080  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           83 LSLIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        83 lgl~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +.+.+....+.++..++++.+.+.|-.+ ..+.-+.+.+.++++++|+++...++++.+|..
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~   96 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVA   96 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            3455556777888999999999998877 468899999999999999999999999998874

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=94.67  E-value=1.5  Score=35.74  Aligned_cols=132  Identities=14%  Similarity=0.213  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHH----HHHHhhhhc-C--CCCCCCHHHHHHH--
Q 032161           11 GLVPYAAMVAVQCVQVGITTLSKAAI-SQGATPLILAVYADAIASLIL----LPLSFFLNR-K--NRPPLTFALLCKV--   80 (146)
Q Consensus        11 ~~~~~l~ll~~~~~wg~~~v~~K~~l-~~g~~P~~l~~~R~~iA~l~l----~~~~~~~~~-~--~~~~~~~~~~~~l--   80 (146)
                      -..+.++.+.++++-|.-++.-.+-+ ..+++|...+.+.-..+..++    .|+.+.... .  ..++-.+.||...  
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA  253 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence            34678899999999999998765444 456999999999988885443    344333221 1  1244446676653  


Q ss_pred             -------HHHHHHHHHHHHHHHHHH----hhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           81 -------FILSLIGITLMQICVYTG----VSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        81 -------~~lgl~g~~~~~~l~~~g----l~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                             +.+++.|......+||.+    -++.||++=.+.-.+=-.+.-+++.....|.++-.-..+|++..
T Consensus       254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi  326 (372)
T KOG3912|consen  254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILI  326 (372)
T ss_pred             HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence                   234444444443344333    56778888889999999999999999999999999999998765

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.59  E-value=0.24  Score=34.30  Aligned_cols=59  Identities=14%  Similarity=0.041  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           85 LIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        85 l~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +.+....+.+.-.++|+.+.+.|-.+ ...--+.+.+.++++++|+++...+++..+|+.
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~Liia   96 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILA   96 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence            44555677888899999999888755 678899999999999999999999999998864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=94.46  E-value=2.4  Score=35.26  Aligned_cols=132  Identities=15%  Similarity=0.050  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHHHHHH-HHhhhh-c-CCC-----CCCC
Q 032161           12 LVPYAAMVAVQCVQVGIT-------TLSKAAISQGATPLILAVYADA---IASLILLP-LSFFLN-R-KNR-----PPLT   73 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~-------v~~K~~l~~g~~P~~l~~~R~~---iA~l~l~~-~~~~~~-~-~~~-----~~~~   73 (146)
                      .|+.+.++++.+..+.+.       +.-+.+...|.||.....-++.   ++..+.-+ +..+.. | ++.     .+.+
T Consensus       173 ~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~  252 (345)
T PRK13499        173 KKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLA  252 (345)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcccc
Confidence            568888888999998888       6666655567888887777776   55444332 222221 2 111     1112


Q ss_pred             HHHHHHHHHHHHHHHHH---HHHHHHHHhhhccHHHHHH---HH-hhHHHHHHHHHHHHhhHHHH------HHHHHHHHH
Q 032161           74 FALLCKVFILSLIGITL---MQICVYTGVSFSSPTLVSA---TN-NLIPAFTFLLAVIFRFFFFF------IFVVFYFLI  140 (146)
Q Consensus        74 ~~~~~~l~~lgl~g~~~---~~~l~~~gl~~tsas~asi---i~-~l~Pv~t~lla~l~l~E~~~------~~~~~~~~~  140 (146)
                      ++.+.+-.+.+.+++..   .+.++..|-+..+.+.+..   +. .+.-++..+.+. ++||.=.      .+.+.++++
T Consensus       253 ~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vl  331 (345)
T PRK13499        253 KPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVV  331 (345)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHH
Confidence            22333333333333333   3456666666664444433   44 555566666666 6999865      677777777


Q ss_pred             HHhc
Q 032161          141 ILLS  144 (146)
Q Consensus       141 ~~~~  144 (146)
                      +..+
T Consensus       332 iI~g  335 (345)
T PRK13499        332 IILA  335 (345)
T ss_pred             HHHH
Confidence            6543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.31  E-value=0.25  Score=34.34  Aligned_cols=60  Identities=10%  Similarity=-0.008  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           84 SLIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        84 gl~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+.+..+.+.++..++++.+.+.|-.+ ..+.-+.+.+.++++++|+++...++|+.+|..
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~   96 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICA   96 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            345555677777889999998888766 567888899999999999999999999998864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.16  E-value=1.6  Score=35.34  Aligned_cols=111  Identities=14%  Similarity=0.081  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLM   91 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~   91 (146)
                      .-+....+.+.++-|......|+...+ .+.   ...|               ++ +.++.-.++.  ....|+.-....
T Consensus         6 ~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~---------------~~-~~~~~~l~~~--~W~~G~~~~~~g   63 (300)
T PF05653_consen    6 YIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLR---------------AG-SGGRSYLRRP--LWWIGLLLMVLG   63 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cccc---------------cc-chhhHHHhhH--HHHHHHHHHhcc
Confidence            346677778888889999888887543 111   0000               00 0011111222  222333333445


Q ss_pred             HHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           92 QICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        92 ~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      +.+.+.++.+.+++..+-+.++.=++..+++..+++|++....+.+..++.+.
T Consensus        64 ~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G  116 (300)
T PF05653_consen   64 EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILG  116 (300)
T ss_pred             hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhh
Confidence            56778999999999999999999999999999999999999999988877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.71  E-value=0.1  Score=40.50  Aligned_cols=51  Identities=22%  Similarity=0.122  Sum_probs=46.1

Q ss_pred             HHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 032161           90 LMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLI  140 (146)
Q Consensus        90 ~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~  140 (146)
                      +.++.|..+++..+|+.++.+...+..|+.+++++.++++++.+....-++
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaail  115 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAIL  115 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHH
Confidence            567889999999999999999999999999999999999999988765443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.66  E-value=3.4  Score=33.90  Aligned_cols=122  Identities=18%  Similarity=0.072  Sum_probs=82.4

Q ss_pred             HHHHHHHHHH----HHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 032161           19 VAVQCVQVGI----TTLSKAAISQGATPLILAV--YADAIASLILLPLSFFLNRKNRPPLTFALLCKVFILSLIGITLMQ   92 (146)
Q Consensus        19 l~~~~~wg~~----~v~~K~~l~~g~~P~~l~~--~R~~iA~l~l~~~~~~~~~~~~~~~~~~~~~~l~~lgl~g~~~~~   92 (146)
                      +.+++.|+.+    .+.-|.++.+.=-|..+..  +|.+...+.+...-..+.- +-++.+++.....+-+.++-. +..
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~lf~-~~i   91 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLLFV-GML   91 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHHHH-HHH
Confidence            3445555544    4456777765334555555  8888877766554222111 124566776666666666643 444


Q ss_pred             HHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           93 ICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        93 ~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      ..-..+++|.+...-.++=+.+|+++++....+++.+..-..|.-.....
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~  141 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMI  141 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHH
Confidence            55567899999999999999999999999999999888887777665543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.09  E-value=0.73  Score=38.73  Aligned_cols=120  Identities=17%  Similarity=0.125  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CCCCHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQ---GATPLILAVYADAIASLILLPLSFFLNRKNR---PPLTFALLCKVFILSL   85 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~---g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~---~~~~~~~~~~l~~lgl   85 (146)
                      ..+.+..+.+++.||.+.++.|+-.++   ++|--.+..+=-++..++++|..+..++-..   +-++..+...++..++
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~l  325 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNL  325 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhH
Confidence            467889999999999999999987643   3666666666666677788876654332111   2233455667788999


Q ss_pred             HHHHHHHHHHHHHhhhccHHHHHHHHh-hHHHHHHHHHHHHhhHHHHH
Q 032161           86 IGITLMQICVYTGVSFSSPTLVSATNN-LIPAFTFLLAVIFRFFFFFI  132 (146)
Q Consensus        86 ~g~~~~~~l~~~gl~~tsas~asii~~-l~Pv~t~lla~l~l~E~~~~  132 (146)
                      +|..+.-++|-+|.-.|+|-.+++=++ ++|+ .++.-.++-+.+.+.
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPL-A~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPL-AMFADVLIKGKHPSA  372 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeH-HHHHHHHHcCCCCCH
Confidence            999999999999999999999987666 4454 444555554444433

>PRK11431 multidrug efflux system protein; Provisional

Probab=92.91  E-value=0.6  Score=32.18  Aligned_cols=59  Identities=3%  Similarity=-0.123  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           85 LIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        85 l~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +.+....+.+...++|+.+.+.+-.+ ...--+.+.+.++++.+|+++...++++.+|..
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~   95 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVA   95 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            44555677788899999998888766 558889999999999999999999999998864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.89  E-value=1.5  Score=36.40  Aligned_cols=114  Identities=12%  Similarity=0.026  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh--hhhcC---CCCCCCHHHHHHHHHHHHH
Q 032161           12 LVPYAAMVAVQCVQVGITTLSKAAISQGATPLILAVYADAIASLILLPLSF--FLNRK---NRPPLTFALLCKVFILSLI   86 (146)
Q Consensus        12 ~~~~l~ll~~~~~wg~~~v~~K~~l~~g~~P~~l~~~R~~iA~l~l~~~~~--~~~~~---~~~~~~~~~~~~l~~lgl~   86 (146)
                      ..+++..+++.+|||++++..|. .++ .| .+....-..+=.-++.|+..  ...+.   .....+.+.+..-++-|.+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~   82 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL   82 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence            35889999999999999999998 333 33 22221111111112222111  11110   0112345556655566665


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHH
Q 032161           87 GITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFF  129 (146)
Q Consensus        87 g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~  129 (146)
                      -. ..|..++.++++.+.+.+--+ +.++=+...++..++.+|-
T Consensus        83 W~-iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew  125 (345)
T PRK13499         83 WG-IGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNF  125 (345)
T ss_pred             HH-hhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccc
Confidence            44 667899999999999988766 5688888899988888864

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.72  E-value=1.6  Score=34.61  Aligned_cols=118  Identities=20%  Similarity=0.219  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 032161           26 VGITTLSKAAIS-QGATPLILAVYADAIASLILLPLSFFLNRKNRP----PLTFALLCKVFILSLIGITLMQICVYTGVS  100 (146)
Q Consensus        26 g~~~v~~K~~l~-~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~----~~~~~~~~~l~~lgl~g~~~~~~l~~~gl~  100 (146)
                      +......|...+ .+..-.+-.++.-+++..+++.+.+..+.+...    ..+.....++++-|+..+ +-.++--|.++
T Consensus       168 aafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv-giSy~saWcvr  246 (309)
T COG5070         168 AAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV-GISYCSAWCVR  246 (309)
T ss_pred             HHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh-hhhhccceeEe
Confidence            334445555543 236778889999999999998888776643221    122223345555555543 44456667899


Q ss_pred             hccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161          101 FSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus       101 ~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      -|+.+.-+..-+++-.-..+-+.++++|+.++.++|.+++-.+|
T Consensus       247 VtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls  290 (309)
T COG5070         247 VTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS  290 (309)
T ss_pred             ehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999887665

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=90.92  E-value=3.9  Score=28.31  Aligned_cols=59  Identities=12%  Similarity=-0.102  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           85 LIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        85 l~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      +.+....+.+...++|+.+.+.+-.+ ...--+.+.+.++++.+|+++...++++.+|..
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~  101 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLA  101 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            34445667788899999999888766 568889999999999999999999999998864

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.81  E-value=5  Score=32.93  Aligned_cols=134  Identities=16%  Similarity=0.173  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhcCC-----CC-CCCHHHHHHHHH
Q 032161           10 VGLVPYAAMVAVQCVQVGITTLSKAAISQ-GATPLILAVYADAIASLILLPLSFFLNRKN-----RP-PLTFALLCKVFI   82 (146)
Q Consensus        10 ~~~~~~l~ll~~~~~wg~~~v~~K~~l~~-g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~-----~~-~~~~~~~~~l~~   82 (146)
                      .+.++|..+....+.-+...+..|+..+. +.+-..+..+--+.+.+.+....+..+..+     .+ ..+...+..+.+
T Consensus       154 f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~l  233 (314)
T KOG1444|consen  154 FNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLL  233 (314)
T ss_pred             ecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHH
Confidence            34567888888888889999999998764 477778888888888777666554332211     00 112234555666


Q ss_pred             HHHHHHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 032161           83 LSLIGITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILLS  144 (146)
Q Consensus        83 lgl~g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~~  144 (146)
                      -+++|..+ .++-++..+.+||+.-++.-...-..+.+...++.+++++...++|.++-.++
T Consensus       234 Scv~gf~i-sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g  294 (314)
T KOG1444|consen  234 SCVMGFGI-SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG  294 (314)
T ss_pred             HHHHHHHH-HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence            66666644 45667889999999888888788888999999999999999999999876554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=81.26  E-value=23  Score=29.16  Aligned_cols=128  Identities=7%  Similarity=0.010  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-----CCCHHHHHHHHHHHHH
Q 032161           13 VPYAAMVAVQCVQVGITTLSKAAIS-QGATPLILAVYADAIASLILLPLSFFLNRKNRP-----PLTFALLCKVFILSLI   86 (146)
Q Consensus        13 ~~~l~ll~~~~~wg~~~v~~K~~l~-~g~~P~~l~~~R~~iA~l~l~~~~~~~~~~~~~-----~~~~~~~~~l~~lgl~   86 (146)
                      .++.++..--.+=|......+...+ .++++..+...-.+..++.-........ ..++     +.+++-+..+++.+.+
T Consensus       172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~s~~  250 (327)
T KOG1581|consen  172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLYSTC  250 (327)
T ss_pred             HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHHHHh
Confidence            3455555555555666666665554 3588888887776666554333322111 1111     2355667778888888


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 032161           87 GITLMQICVYTGVSFSSPTLVSATNNLIPAFTFLLAVIFRFFFFFIFVVFYFLIIL  142 (146)
Q Consensus        87 g~~~~~~l~~~gl~~tsas~asii~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~  142 (146)
                      |. ..|.+.++-++.=++-.-+.|+.+=-.+.++++.+..+.+++..-|+|.++..
T Consensus       251 ga-vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVF  305 (327)
T KOG1581|consen  251 GA-VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVF  305 (327)
T ss_pred             hh-hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeeh
Confidence            86 77788889999999999999999999999999999999999998888876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.21
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.05

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.21  E-value=2.2e-06  Score=60.91  Aligned_cols=62  Identities=10%  Similarity=-0.014  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           82 ILSLIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        82 ~lgl~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      .+|+++..+++.+++.++++.+++.+..+ .++.|+++.++++++++|+++...+.+..+|+.
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~   96 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICA   96 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            57778888999999999999999999988 899999999999999999999999999998874

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.05  E-value=1.2e-05  Score=54.81  Aligned_cols=62  Identities=10%  Similarity=-0.014  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccHHHHHHH-HhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 032161           82 ILSLIGITLMQICVYTGVSFSSPTLVSAT-NNLIPAFTFLLAVIFRFFFFFIFVVFYFLIILL  143 (146)
Q Consensus        82 ~lgl~g~~~~~~l~~~gl~~tsas~asii-~~l~Pv~t~lla~l~l~E~~~~~~~~~~~~~~~  143 (146)
                      ..++.+...++.++..++++.+.+.+..+ .++.|+++.+.++++++|+++...+.+..+|..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~   96 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICA   96 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            56677777888999999999999999888 799999999999999999999999999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00