Citrus Sinensis ID: 032270

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccEEEEccHHHHHHHHHHHHHccccccccccccEEEEEEEcccEEEEEEEccEEEEEEccccEEEEEcEEEEEEEEcccEEcccEEEEEEEEEEEEEEEEEEccccccEEEEEccccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccEEEEcHHHHHHHHHHHHHHccccccccccccHHEEcccccccEEEEEEcccEEEEEEEccEEEEEcEEEEEEEEcccEEEEcEEEEEEEEEEEEEEEEEEccccccEEEEEEcccccccccHHHcccccc
Coil and Loop (DISEMBL)
MAQQQLIANNqegaeiyhgesicKQKSHELLAEinlpkgllplndlvevgynratgfvwlkqkkrtehkfrsigrnvsydtevtgfvedrrmrrltgvkskeLLIWVSISdiytdapdskkitfanstglarsfpisafelden
Flexible Loop (DISEMBL)
maqqqliannqegaeiyHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRAtgfvwlkqkkrtehkfrsigrnvsydtevtgfvedrrmrrltgvkskelliWVSISdiytdapdsKKITFanstglarsfpisafelden
Low Complexity Region (SEG)
MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN
Disordered region (IsUnstruct)
**************EIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLA*************
Disordered Region (DISOPRED)
**************EIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFE****
Disordered Region (DISEMBL)
MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN
Disordered Region (DISPRO)
**********QEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAF*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
225444549	149	PREDICTED: uncharacterized protein LOC10	0.972	0.939	0.730	2e-55
255557315	145	conserved hypothetical protein [Ricinus	0.986	0.979	0.727	3e-55
224078982	145	predicted protein [Populus trichocarpa]	0.965	0.958	0.733	6e-55
356557815	162	PREDICTED: uncharacterized protein LOC10	0.937	0.833	0.674	4e-49
326489267	159	predicted protein [Hordeum vulgare subsp	0.944	0.855	0.639	9e-49
326487844	162	predicted protein [Hordeum vulgare subsp	0.937	0.833	0.651	1e-48
449434262	147	PREDICTED: uncharacterized protein LOC10	0.951	0.931	0.598	6e-48
297791063	143	hypothetical protein ARALYDRAFT_494351 [	0.993	1.0	0.580	9e-48
18422648	143	uncharacterized protein [Arabidopsis tha	0.993	1.0	0.573	2e-47
242051621	171	hypothetical protein SORBIDRAFT_03g00208	0.937	0.789	0.637	3e-47

>gi|225444549|ref|XP_002275796.1| PREDICTED: uncharacterized protein LOC100265752 [Vitis vinifera] gi|297740690|emb|CBI30872.3| unnamed protein product [Vitis vinifera]

 Score =  219 bits (559), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/141 (73%), Positives = 122/141 (86%), Gaps = 1/141 (0%)

Query: 5   QLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKK 64
           Q++A ++E AE+Y GE++CKQKS ELL EI LPKGLLPL DL EVGYNR+TGFVWLKQKK
Sbjct: 4   QVVAGHRENAEVYTGEALCKQKSRELLEEICLPKGLLPLEDLEEVGYNRSTGFVWLKQKK 63

Query: 65  RTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITF 124
           R +HKF+ IGRNVSYDTEVT FVE +RM++LTGVKSKELLIWV+ISDIY D P S KI F
Sbjct: 64  RKQHKFQRIGRNVSYDTEVTAFVEKQRMKKLTGVKSKELLIWVTISDIYIDDPSSGKIAF 123

Query: 125 ANS-TGLARSFPISAFELDEN 144
            NS TG++RSFP+SAF+LDE+
Sbjct: 124 GNSTTGISRSFPVSAFDLDES 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557315|ref|XP_002519688.1| conserved hypothetical protein [Ricinus communis] gi|223541105|gb|EEF42661.1| conserved hypothetical protein [Ricinus communis]

 Score =  219 bits (558), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/143 (72%), Positives = 122/143 (85%), Gaps = 1/143 (0%)

Query: 1   MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWL 60
           MA Q+ IAN+++ AEIY GES+CKQKS ELL EI LPKGLLPL+D+VEVGYNR TGFVWL
Sbjct: 1   MASQR-IANHRDEAEIYLGESLCKQKSIELLEEIRLPKGLLPLDDIVEVGYNRTTGFVWL 59

Query: 61  KQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSK 120
           KQK    H+FR IGRNV+YDTEVT FVEDRRM+RLTGVKSKELLIWV+ISDIY D  D+ 
Sbjct: 60  KQKNSKNHRFREIGRNVNYDTEVTAFVEDRRMKRLTGVKSKELLIWVTISDIYVDHNDNS 119

Query: 121 KITFANSTGLARSFPISAFELDE 143
           KITF N +G++R+FP+SAF+L E
Sbjct: 120 KITFGNPSGISRTFPVSAFQLQE 142

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078982|ref|XP_002305706.1| predicted protein [Populus trichocarpa] gi|222848670|gb|EEE86217.1| predicted protein [Populus trichocarpa]

 Score =  218 bits (555), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 119/139 (85%)

Query: 5   QLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKK 64
           Q IA ++E AEI+ GES+CKQKS ELL EI+LP GLLPL+D+VEVGYNR TGFVWLKQKK
Sbjct: 4   QHIATHREKAEIHTGESLCKQKSLELLEEIHLPMGLLPLDDIVEVGYNRTTGFVWLKQKK 63

Query: 65  RTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITF 124
           R +H+F  IGR VSYDTEVT FVE+RRMRRLTGVK+KELL WVSISDIY D  D +KITF
Sbjct: 64  RKDHRFLKIGRQVSYDTEVTAFVENRRMRRLTGVKTKELLFWVSISDIYVDEKDLEKITF 123

Query: 125 ANSTGLARSFPISAFELDE 143
            N TG++R+FP+SAFEL+E
Sbjct: 124 GNPTGISRTFPVSAFELEE 142

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557815|ref|XP_003547206.1| PREDICTED: uncharacterized protein LOC100810285 [Glycine max]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 112/135 (82%)

Query: 7   IANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRT 66
           I +++E AEIY GE++C QKS  LL EI LP+GLLPL ++VE+GYNR TGFVWLKQ+ + 
Sbjct: 6   IEHHREEAEIYEGEAVCTQKSRLLLDEILLPRGLLPLENIVEMGYNRTTGFVWLKQRHKK 65

Query: 67  EHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFAN 126
           EH+F +IGR VSY TEVT FVE+ RMRR+TGVK+KEL IWVSIS+I+ D P S KITFAN
Sbjct: 66  EHRFATIGRTVSYATEVTAFVEEHRMRRVTGVKTKELFIWVSISEIFVDDPASGKITFAN 125

Query: 127 STGLARSFPISAFEL 141
           S+G+ARSFP+SAF L
Sbjct: 126 SSGIARSFPLSAFSL 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326489267|dbj|BAK01617.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510001|dbj|BAJ87217.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326515178|dbj|BAK03502.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 5   QLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKK 64
           Q I   +EGAE+YHG ++C +K+ ELLAE N+P GLLPL D+ EVGYNRATGFVWL+QKK
Sbjct: 3   QAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQKK 62

Query: 65  RTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITF 124
              H F+ IGR VSY TEVT FVEDR+M+R+TGVKSKELLIW+++ D++ D  D  KITF
Sbjct: 63  ALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSKITF 122

Query: 125 ANSTGLARSFPISAFE 140
              TGL R+FP+SAFE
Sbjct: 123 KTPTGLGRTFPVSAFE 138

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326487844|dbj|BAJ89761.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/135 (65%), Positives = 106/135 (78%)

Query: 5   QLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKK 64
           Q I   +EGAE+YHG ++C +K+ ELLAE NLP GLLPL D+ EVGYNRATGFVWL+QKK
Sbjct: 3   QAIEAQREGAEVYHGAALCAEKAVELLAETNLPLGLLPLADIEEVGYNRATGFVWLRQKK 62

Query: 65  RTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITF 124
              H F+ IGR VSY TEVT FVEDR+M+R+TGVKSKELLIW+++ D+Y D  D  KITF
Sbjct: 63  ALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMYIDKDDPSKITF 122

Query: 125 ANSTGLARSFPISAF 139
              TGL R+FP+SAF
Sbjct: 123 KTPTGLRRTFPVSAF 137

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434262|ref|XP_004134915.1| PREDICTED: uncharacterized protein LOC101215500 [Cucumis sativus] gi|449518595|ref|XP_004166322.1| PREDICTED: uncharacterized protein LOC101232298 [Cucumis sativus]

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 114/137 (83%)

Query: 7   IANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRT 66
           +A ++  AEIY+G++ICKQKS +LL +  LP+GLLPLND++EVGYNR +GF+WLKQ+K+ 
Sbjct: 5   LATHRADAEIYYGDAICKQKSQDLLDQFFLPRGLLPLNDILEVGYNRTSGFIWLKQQKKK 64

Query: 67  EHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFAN 126
           EH+F +IGR V YDTEV+ F+E+RR RRLTGVKSKE  +W+++S+IY D  ++ KITF  
Sbjct: 65  EHRFPAIGRTVLYDTEVSAFIEERRFRRLTGVKSKEFFLWITVSEIYVDQQNTSKITFGT 124

Query: 127 STGLARSFPISAFELDE 143
           STG+A+SFP+SAF ++E
Sbjct: 125 STGIAKSFPVSAFLIEE 141

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791063|ref|XP_002863416.1| hypothetical protein ARALYDRAFT_494351 [Arabidopsis lyrata subsp. lyrata] gi|297309251|gb|EFH39675.1| hypothetical protein ARALYDRAFT_494351 [Arabidopsis lyrata subsp. lyrata]

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 121/143 (84%)

Query: 1   MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWL 60
           M+ Q+  ++ +EGAEI +GES CKQK+ E+L+ +NLPKGLLPL+++ E+G+N++TG+VW+
Sbjct: 1   MSSQETKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWI 60

Query: 61  KQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSK 120
           K K + +H+F++IG+NVSYD+EVT  VE+RRMR+LTG+KSKE+LIWV+IS+I+ +  D  
Sbjct: 61  KIKNKVQHRFKAIGKNVSYDSEVTAIVENRRMRQLTGIKSKEILIWVTISEIFVNDQDPT 120

Query: 121 KITFANSTGLARSFPISAFELDE 143
            ITFAN TGL+R+FP++AFE DE
Sbjct: 121 IITFANPTGLSRTFPVTAFEEDE 143

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422648|ref|NP_568659.1| uncharacterized protein [Arabidopsis thaliana] gi|10177704|dbj|BAB11078.1| unnamed protein product [Arabidopsis thaliana] gi|21553638|gb|AAM62731.1| unknown [Arabidopsis thaliana] gi|111074150|gb|ABH04448.1| At5g46230 [Arabidopsis thaliana] gi|332007972|gb|AED95355.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 121/143 (84%)

Query: 1   MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWL 60
           M+ Q+  ++ +EGAEI +GES CKQK+ E+L+ +NLPKGLLPL+++ E+G+N++TG+VW+
Sbjct: 1   MSSQETKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWI 60

Query: 61  KQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSK 120
           K K + +H+F++IGRNVSYD+EVT  +E+RRM +LTG+KSKE+LIWV+IS+I+ +  D  
Sbjct: 61  KIKNKVQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPT 120

Query: 121 KITFANSTGLARSFPISAFELDE 143
           +ITFAN TGL+R+FP++AFE DE
Sbjct: 121 QITFANPTGLSRTFPVTAFEEDE 143

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242051621|ref|XP_002454956.1| hypothetical protein SORBIDRAFT_03g002080 [Sorghum bicolor] gi|241926931|gb|EES00076.1| hypothetical protein SORBIDRAFT_03g002080 [Sorghum bicolor]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 5   QLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKK 64
           Q I  ++ GAE+Y G ++C +KS ELL+E++LP GLLPL D+ EVGYNRATGFVWL+QKK
Sbjct: 4   QAIEAHRAGAEVYTGAALCAEKSTELLSEVHLPLGLLPLADMEEVGYNRATGFVWLRQKK 63

Query: 65  RTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITF 124
              H FR IGR VSY  EVT FVEDRRM+R+TGVK+KELLIWV++SD++ D  D  KITF
Sbjct: 64  ALTHTFRQIGRQVSYAAEVTAFVEDRRMKRMTGVKTKELLIWVTLSDMFLDKDDQSKITF 123

Query: 125 ANSTGLARSFPISAF 139
              TGL R+FP+SAF
Sbjct: 124 KTPTGLGRTFPVSAF 138

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2170463	143	AT5G46230 [Arabidopsis thalian	0.993	1.0	0.573	1.9e-44
TAIR|locus:2203043	179	AT1G09310 [Arabidopsis thalian	0.895	0.720	0.553	1.3e-34
TAIR|locus:2027579	166	SVB "SMALLER WITH VARIABLE BRA	0.902	0.783	0.541	2.2e-34
TAIR|locus:2198247	157	AT1G30020 [Arabidopsis thalian	0.784	0.719	0.584	2e-33
TAIR|locus:2134966	157	AT4G24130 [Arabidopsis thalian	0.951	0.872	0.456	1.6e-29
TAIR|locus:2157824	171	AT5G49600 "AT5G49600" [Arabido	0.875	0.736	0.419	7.8e-23
TAIR|locus:2166178	170	AT5G37070 "AT5G37070" [Arabido	0.729	0.617	0.300	8.7e-08
TAIR|locus:2079601	169	AT3G07470 [Arabidopsis thalian	0.729	0.621	0.301	1.1e-07
TAIR|locus:505006095	149	AT1G02813 [Arabidopsis thalian	0.638	0.617	0.305	2.3e-07
TAIR|locus:2097668	170	AT3G08890 "AT3G08890" [Arabido	0.715	0.605	0.313	3.8e-07

TAIR|locus:2170463 AT5G46230 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 82/143 (57%), Positives = 121/143 (84%)

Query:     1 MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWL 60
             M+ Q+  ++ +EGAEI +GES CKQK+ E+L+ +NLPKGLLPL+++ E+G+N++TG+VW+
Sbjct:     1 MSSQETKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWI 60

Query:    61 KQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSK 120
             K K + +H+F++IGRNVSYD+EVT  +E+RRM +LTG+KSKE+LIWV+IS+I+ +  D  
Sbjct:    61 KIKNKVQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPT 120

Query:   121 KITFANSTGLARSFPISAFELDE 143
             +ITFAN TGL+R+FP++AFE DE
Sbjct:   121 QITFANPTGLSRTFPVTAFEEDE 143

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2203043 AT1G09310 [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 72/130 (55%), Positives = 98/130 (75%)

Query:    14 AEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSI 73
             AE+Y G+ IC++K+   L EI++P GLLPL D+ EVGY+R +G VWLKQKK   HKF  I
Sbjct:    12 AEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLKQKKSITHKFTEI 71

Query:    74 GRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARS 133
              + VSY TEVT  VE  ++++LTGVK+KELLIWV+I++IYT+ P +K ITF   T L+R+
Sbjct:    72 DKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPTK-ITFKTPTTLSRT 130

Query:   134 FPISAFELDE 143
             FP++AF + E
Sbjct:   131 FPVTAFIVPE 140

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048046 "apoplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2027579 SVB "SMALLER WITH VARIABLE BRANCHES" [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 71/131 (54%), Positives = 97/131 (74%)

Query:    14 AEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSI 73
             AE Y G+ IC++K+ E L E+++P GLLPL D+ EVGY+R TG VWLKQKK   HKF +I
Sbjct:    12 AEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQKKSITHKFEAI 71

Query:    74 GRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSK-KITFANSTGLAR 132
             G+ VSY TEV   VE  ++++LTGVK+KELLIWV+++++  + P S  KI F   TGL+R
Sbjct:    72 GKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGKINFRTPTGLSR 131

Query:   133 SFPISAFELDE 143
             +FP+SAF + E
Sbjct:   132 TFPVSAFVVPE 142

GO:0005737 "cytoplasm" evidence=ISM

GO:0010090 "trichome morphogenesis" evidence=IMP

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2198247 AT1G30020 [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 66/113 (58%), Positives = 85/113 (75%)

Query:     1 MAQQQLIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWL 60
             MA +++I +  +  E Y  +S+C  K+ ELLA I LP GLLPL D+ EVGYN+  GFVW+
Sbjct:     1 MALREMIIDESDDIESYSDQSLCLDKAKELLALIKLPTGLLPLKDMTEVGYNKTKGFVWM 60

Query:    61 KQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIY 113
             + + + EH FR IGR V YDTE+T FVEDRRMRRLTGVKSKEL+IWV ++DI+
Sbjct:    61 RMRSKIEHTFREIGRRVLYDTEITAFVEDRRMRRLTGVKSKELMIWVPVNDIF 113

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134966 AT4G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 63/138 (45%), Positives = 91/138 (65%)

Query:     6 LIANNQEGAEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKR 65
             ++   +EGAEI +G   C ++S ELL E+  PKG++PL +LVE G  RATG+VW+KQ   
Sbjct:     8 VVGGEREGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTP 67

Query:    66 TEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFA 125
              EH F +    VSY  EVT +V+   M+++TGVKSK++ +WV I ++  + P SKKI F 
Sbjct:    68 YEHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFK 127

Query:   126 NSTGLARSFPISAFELDE 143
                G+ RSFP++ F +DE
Sbjct:   128 TPMGIGRSFPVTGF-MDE 144

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2157824 AT5G49600 "AT5G49600" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 57/136 (41%), Positives = 87/136 (63%)

Query:    14 AEIYHGESICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLK--QKKRTEHK-- 69
             AE+YHG+  C++K   LL+EI LP  LL   ++ E GY + TGFVWLK  +KK+ + K  
Sbjct:    10 AEVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHKEKKKEDQKRR 69

Query:    70 FRSIGR--NV--SYDTEVTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFA 125
             ++ + R  NV   ++ EVT + E  R+++LTGVK+KE ++W+S+ +I  +   S  ITF 
Sbjct:    70 YQDLLRFDNVVVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQVNR-SSGLITFK 128

Query:   126 NSTGL-ARSFPISAFE 140
                GL ++S P+S FE
Sbjct:   129 TEVGLLSKSLPLSVFE 144

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2166178 AT5G37070 "AT5G37070" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 34/113 (30%), Positives = 60/113 (53%)

Query:    29 ELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVE 88
             ELL E  LP G+ P  D     +N  TG + +   +  E  +R     + + T VTG++E
Sbjct:    56 ELLKEFGLPVGIFP-QDATNYEFNEETGKLTVFIPETCEVGYRD-SSVLRFSTTVTGYLE 113

Query:    89 DRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFEL 141
               ++  + G+K+K ++IWV ++ I   + DS K+ F  + G+ +S    A+E+
Sbjct:   114 KGKLAEVEGMKTK-VMIWVKVTCI---SADSSKVYF--TAGIKKSRSRDAYEV 160

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2079601 AT3G07470 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 35/116 (30%), Positives = 58/116 (50%)

Query:    28 HELLAEINLPKGLLPLNDLVEVGYNRATG-F-VWLKQKKRTEHKFRSIGRNVSYDTEVTG 85
             +E+L    LP G+ P   + E  ++  TG F V+L Q    E K+ +    + YD  +TG
Sbjct:    32 YEILLANGLPSGIFP-KGVREFTFDVETGRFSVYLNQA--CEAKYET---EIHYDANITG 85

Query:    86 FVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARS-FPISAFE 140
              +   ++  L+G+ ++EL +W  +  I  D P S  I F    G+ R  + +S FE
Sbjct:    86 TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYF--DVGVVRKQYSLSLFE 139

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:505006095 AT1G02813 [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 29/95 (30%), Positives = 47/95 (49%)

Query:    24 KQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEV 83
             K+  +++L    LP+G+LP   + +   NR TG    K +  T  +F      V Y   +
Sbjct:    22 KRSVYQVLENYTLPRGILP-EGVHDYDLNRRTGV--FKVRFNTTCQFSIDSYKVKYKPVI 78

Query:    84 TGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPD 118
             +G +   R+ RL GV  K L  W++IS++  D  D
Sbjct:    79 SGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDD 113

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2097668 AT3G08890 "AT3G08890" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 36/115 (31%), Positives = 60/115 (52%)

Query:    29 ELLAEINLPKGLLPLNDLVEVGYNRATG--FVWLKQKKRTEHKFRSIGRNVSYDTEVTGF 86
             ELL E  LP G+ P  D     +N  T    V++       +K  S+ R   + T VTGF
Sbjct:    56 ELLKEFGLPVGIFP-RDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLR---FTTTVTGF 111

Query:    87 VEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFEL 141
             +E  ++  + G+K+K ++IWV ++ I   + DS K+ F  + G+ +S    A+E+
Sbjct:   112 LEKGKLADVEGMKTK-VMIWVKVTSI---SADSSKVHF--TAGMKKSRSRDAYEV 160

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	9e-42

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score =  134 bits (339), Expect = 9e-42
 Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 26  KSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTG 85
            ++ELL E  LP GLLP     E   +  TG  W+      E  F      V YD  VTG
Sbjct: 1   TAYELLEEYGLPVGLLPKGV-TEYTLDETTGKFWVYLNGTCEFTFEGYS--VRYDPTVTG 57

Query: 86  FVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAF 139
           ++   R+  L GVK K L +WV I +I  D  D  K+TF+    L++SFP  AF
Sbjct: 58  YISKGRLSGLEGVKVKVLFLWVPIVEISVD--DGDKLTFS-VGVLSKSFPADAF 108

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=1.7e-47  Score=281.92  Aligned_cols=110  Identities=47%  Similarity=0.854  Sum_probs=83.1

Q ss_pred             hHHHHHHhCCCCCCCcCCCCceEEEEEccCcEEEEEeCCeEEEEEcccceEEEEceEEEEEEccCceeeccceeEEEEEe
Q 032270           26 KSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKELLI  105 (144)
Q Consensus        26 ta~elL~~~glP~GLLPl~~V~~y~l~~~tG~~~v~l~~~c~~~F~~~~~~v~Y~~~ItG~i~~g~i~~L~GVkvK~lf~  105 (144)
                      ||||||++||||+|||| .+|++|+||++||+|||+|+++|+|+|+.  |+|+|+++|||+|++|+|++|+|||+|+||+
T Consensus         1 tayelL~~~glP~GLLP-~~v~~y~l~~~tG~f~v~l~~~C~~~~~~--~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~   77 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLP-LGVTEYGLNRDTGFFWVKLKSPCEFRFEG--YLVSYDSEITGYIEKGKIKNLTGVKVKELFL   77 (110)
T ss_dssp             --HHHHHHHS-TT-TTT-SSS-EEEE-TTT-SEEEE-SS-EEEESTT--SEEEE-SEEEEEE-SS-EEEEES-EEE-SSS
T ss_pred             CHHHhHHHcCCCCCcCC-CCceEEEEecCCcEEEEEecCCEEEEEEE--EEEEEcCeEEEEECCCcCccccCEEEEEEEE
Confidence            79999999999999999 57899999999999999999999999986  8999999999999999999999999999999


Q ss_pred             eeeeeEEEEcCCCCCeEEEEeCCceeeeecccccccC
Q 032270          106 WVSISDIYTDAPDSKKITFANSTGLARSFPISAFELD  142 (144)
Q Consensus       106 Wv~I~eI~vd~~~~~~i~F~~g~gisksfP~~~F~~~  142 (144)
                      |++|++|.++   +++|+|++|. ++++||+++|++|
T Consensus        78 W~~v~~i~~~---~~~i~F~~g~-~s~sfp~~~F~~s  110 (110)
T PF04398_consen   78 WVPVTEISVD---GDKIYFKVGG-ISKSFPVSAFEES  110 (110)
T ss_dssp             EES---BEE----SSSEE-TTSS-SS----TTTTSS-
T ss_pred             EeeEEEEEEc---CCEEEEEEee-EeccCCHHHhccC
Confidence            9999999995   8999999976 9999999999986

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	144
1ydu_A	170	Solution Nmr Structure Of At5g01610, An Arabidopsis		8e-04

>pdb|1YDU|A Chain A, Solution Nmr Structure Of At5g01610, An Arabidopsis Thaliana Protein Containing Duf538 Domain Length = 170

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 29  ELLAEINLPKGLLPLNDLVEVGYNRATG--FVWLKQKKRTEHKFRSIGRNVSYDTEVTGF 86
           ELL E +LP G+ P  D     ++  T    V +       +K  S+   + + T VTG 
Sbjct: 56  ELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKDSSV---LKFTTTVTGH 111
Query: 87  VEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN 144
           +E  ++  + G+K+K ++IWV ++ I TDA    K+ F  + G+ +S    A+ +  N
Sbjct: 112 LEKGKLTDVEGIKTK-VMIWVKVTSISTDAS---KVYF--TAGMKKSRSRDAYGVQRN 163

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	1e-36

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score =  122 bits (308), Expect = 1e-36
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 25  QKS-HELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEV 83
           QK   ELL E +LP G+ P  D     ++  T  + +      E  ++     + + T V
Sbjct: 51  QKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTV 108

Query: 84  TGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFEL 141
           TG +E  ++  + G+K+K ++IWV ++ I T   D+ K+ F  + G+ +S    A+ +
Sbjct: 109 TGHLEKGKLTDVEGIKTK-VMIWVKVTSIST---DASKVYF--TAGMKKSRSRDAYGV 160

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=9.8e-45  Score=283.47  Aligned_cols=115  Identities=27%  Similarity=0.502  Sum_probs=109.9

Q ss_pred             cchhhHHHHHHhCCCCCCCcCCCCceEEEEEccCcEEEEEeCCeEEEEEcccceEEEEceEEEEEEccCceeeccceeEE
Q 032270           22 ICKQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSK  101 (144)
Q Consensus        22 ~~~~ta~elL~~~glP~GLLPl~~V~~y~l~~~tG~~~v~l~~~c~~~F~~~~~~v~Y~~~ItG~i~~g~i~~L~GVkvK  101 (144)
                      .+.+++||||++||||+|||| ++|++|+||++||+|||+|+++|+|+|+. +|+|+|+++|||+|++|+|++|+||++|
T Consensus        49 ~~~~ta~elL~e~gLP~GLLP-~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~-~~~v~Y~~~VtG~l~~GkI~~L~GVk~K  126 (170)
T 1ydu_A           49 KMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK  126 (170)
T ss_dssp             TTTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE
T ss_pred             cccccHHHHHHHcCCCCCcCC-CCCeEEEEECCCcEEEEEeCCCEEEEecC-ccEEEEcCEEEEEEcCCcCccccCEEEE
Confidence            578899999999999999999 99999999999999999999999999985 9999999999999999999999999999


Q ss_pred             EEEeeeeeeEEEEcCCCCCeEEEEeCCceeeeecccccccCCC
Q 032270          102 ELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDEN  144 (144)
Q Consensus       102 ~lf~Wv~I~eI~vd~~~~~~i~F~~g~gisksfP~~~F~~~~~  144 (144)
                      +| +|++|++|.|+   +++|+|++  |++++||+++|+.+|+
T Consensus       127 ~L-lWv~V~eI~v~---~~kI~F~v--Gi~ksfp~saFe~~~~  163 (170)
T 1ydu_A          127 VM-IWVKVTSISTD---ASKVYFTA--GMKKSRSRDAYGVQRN  163 (170)
T ss_dssp             SS-SEESCCCBEEC---SSSEECTT--SSSSCCCHHHHSSCCC
T ss_pred             EE-EEeeEEEEEEe---CCEEEEEE--cCcccccHHHhcCCcC
Confidence            99 99999999995   89999998  5799999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	144
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	3e-37

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  123 bits (310), Expect = 3e-37
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 24  KQKS-HELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTE 82
            QK   ELL E +LP G+ P  D     ++  T  + +      E  ++     + + T 
Sbjct: 49  MQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTT 106

Query: 83  VTGFVEDRRMRRLTGVKSKELLIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFEL 141
           VTG +E  ++  + G+K+K ++IWV ++ I     D+ K+ F  + G+ +S    A+ +
Sbjct: 107 VTGHLEKGKLTDVEGIKTK-VMIWVKVTSIS---TDASKVYF--TAGMKKSRSRDAYGV 159

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-43  Score=273.46  Aligned_cols=112  Identities=27%  Similarity=0.524  Sum_probs=106.0

Q ss_pred             hhhHHHHHHhCCCCCCCcCCCCceEEEEEccCcEEEEEeCCeEEEEEcccceEEEEceEEEEEEccCceeeccceeEEEE
Q 032270           24 KQKSHELLAEINLPKGLLPLNDLVEVGYNRATGFVWLKQKKRTEHKFRSIGRNVSYDTEVTGFVEDRRMRRLTGVKSKEL  103 (144)
Q Consensus        24 ~~ta~elL~~~glP~GLLPl~~V~~y~l~~~tG~~~v~l~~~c~~~F~~~~~~v~Y~~~ItG~i~~g~i~~L~GVkvK~l  103 (144)
                      +...+|||++||||+|||| ++|++|+||++||+|||+|+++|+|.|+. +|+|+|+++|||+|++|+|++|+|||+| +
T Consensus        50 ~k~l~ELL~eygLP~GLLP-~~V~~Y~l~~~TG~f~V~l~~~C~~~f~~-sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-l  126 (169)
T d1ydua1          50 QKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK-V  126 (169)
T ss_dssp             TSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE-S
T ss_pred             CCCHHHHHHhcCCCCccCC-CCceEEEEECCCcEEEEEeCCCEEEEecC-ceEEEEcCEEEEEEcCCcCccccceEEE-E
Confidence            4579999999999999999 99999999999999999999999999975 8999999999999999999999999999 7


Q ss_pred             EeeeeeeEEEEcCCCCCeEEEEeCCceeeeecccccccCC
Q 032270          104 LIWVSISDIYTDAPDSKKITFANSTGLARSFPISAFELDE  143 (144)
Q Consensus       104 f~Wv~I~eI~vd~~~~~~i~F~~g~gisksfP~~~F~~~~  143 (144)
                      |+|++|++|.+|   +++|+|++  |++|+||+++|+.++
T Consensus       127 flWv~V~eI~vd---~~kI~F~v--GI~KsfP~daFE~pr  161 (169)
T d1ydua1         127 MIWVKVTSISTD---ASKVYFTA--GMKKSRSRDAYGVQR  161 (169)
T ss_dssp             SSEESCCCBEEC---SSSEECTT--SSSSCCCHHHHSSCC
T ss_pred             EEEEEEEEEEEc---CCeEEEEe--cccccCCHHHccCCc
Confidence            899999999998   78999987  589999999998876