Citrus Sinensis ID: 032426

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
Protein Sequence
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccEEEcccccHHHHHHHcccccccccccccccccEEEEEEcccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccEEEcccccEEcc
Secondary Structure Prediction (SSPRO)
cccHHHccccccccccccccccccccccEccccHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccHHHHcccccccEEEEEEEccccEEEcccEEEEEEcEEEEEEEEEEEEEEEEEEcccccccHccccccEEEcc
Coil and Loop (DISEMBL)
masirsfgkwtvdhqicpqhtTIQAKQAVVSIPISRRAAAILISslpfsvislpkcseARERRnkkaipledyhttsdglkyydivegkgpvaqkgstvqvgLNFKVEFQRYIIIVFTFSvvlprtnvtrhlncgvetqil
Flexible Loop (DISEMBL)
masirsfgkwtvdhqiCPQHTTIQAKQAVVSIPISRRAAAILisslpfsvislpkcsearerrnkkaipledyhttsdGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFsvvlprtnvtrhlncgvetqil
Low Complexity Region (SEG)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Disordered region (IsUnstruct)
*****SFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKC***********IPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGV*****
Disordered Region (DISOPRED)
***************************************AILISSLPFSVI**********************HTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Disordered Region (DISEMBL)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Disordered Region (DISPRO)
*****************PQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQIL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	141	2.2.26 [Sep-21-2011]
Q9LM71	232	Peptidyl-prolyl cis-trans	yes	no	0.737	0.448	0.491	2e-20

>sp|Q9LM71|FKB18_ARATH Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 12/116 (10%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLN 104
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QV  +
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFD 116

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
297745584	222	unnamed protein product [Vitis vinifera]	0.709	0.450	0.619	4e-26
224083348	209	predicted protein [Populus trichocarpa]	0.709	0.478	0.570	7e-25
147815138	682	hypothetical protein VITISV_024651 [Viti	0.730	0.151	0.574	8e-25
449455631	227	PREDICTED: peptidyl-prolyl cis-trans iso	0.609	0.378	0.610	2e-21
359491859	187	PREDICTED: probable FKBP-type peptidyl-p	0.489	0.368	0.742	1e-20
357467145	228	hypothetical protein MTR_3g115970 [Medic	0.517	0.320	0.653	3e-19
255539292	219	FK506 binding protein, putative [Ricinus	0.709	0.456	0.578	8e-19
15218039	232	peptidylprolyl isomerase [Arabidopsis th	0.737	0.448	0.491	1e-18
8886936	233	F2D10.32 [Arabidopsis thaliana]	0.737	0.446	0.491	1e-18
297845056	229	F2D10.32 [Arabidopsis lyrata subsp. lyra	0.723	0.445	0.508	5e-17

>gi|297745584|emb|CBI40749.3| unnamed protein product [Vitis vinifera]

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 78/105 (74%), Gaps = 5/105 (4%)

Query: 1   MASIRSFGKWTVDHQI-CPQHTTIQA---KQAVVSIPISRRAAAILISSLPFSVISLPKC 56
           MASIRS  +W VD+ +  P  + IQ    K  ++ +PISRR A ILIS LPFSVIS P  
Sbjct: 1   MASIRSIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPISRRCA-ILISVLPFSVISQPHS 59

Query: 57  SEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
           S+ARERR KK IPLEDY T+ DGLKYYD+V+G GPVA+KGS+VQV
Sbjct: 60  SDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAEKGSSVQV 104

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083348|ref|XP_002306991.1| predicted protein [Populus trichocarpa] gi|222856440|gb|EEE93987.1| predicted protein [Populus trichocarpa]

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 74/107 (69%), Gaps = 7/107 (6%)

Query: 1   MASIRSFGKWTVDHQI------CPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLP 54
           MAS RS  KW+    +       P+ T  Q+    +S P SRR A ILIS+LPF++ SLP
Sbjct: 1   MASTRSLDKWSGHRHLQNLAESTPKKTQEQSNHVFLSNPTSRRCA-ILISTLPFTLTSLP 59

Query: 55  KCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
           + SEARERRNKK IPLEDY T+ DGLKYYD++EGKG  A+KG TVQV
Sbjct: 60  QLSEARERRNKKTIPLEDYLTSPDGLKYYDVLEGKGAAAEKGMTVQV 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815138|emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/108 (57%), Positives = 77/108 (71%), Gaps = 5/108 (4%)

Query: 1   MASIRSFGKWTVDHQIC-PQHTTIQA---KQAVVSIPISRRAAAILISSLPFSVISLPKC 56
           MASIR   +W VD+ +  P  + IQ    K  ++ +PI RR A ILIS LPFS+IS P  
Sbjct: 1   MASIRXIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPIXRRCA-ILISVLPFSLISQPHS 59

Query: 57  SEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLN 104
           S+ARERR KK IPLEDY T+ DGLKYYD+V+G GPVA+KGS+VQV  +
Sbjct: 60  SDARERRTKKNIPLEDYLTSPDGLKYYDVVBGNGPVAEKGSSVQVHFD 107

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455631|ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic-like [Cucumis sativus] gi|449530267|ref|XP_004172117.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic-like [Cucumis sativus]

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 73/95 (76%), Gaps = 9/95 (9%)

Query: 14  HQICPQ---HTTIQ----AKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKK 66
           H++ PQ   H++      A Q   S+PISRR+A ILISSLPF+++S+   S+ARERRNKK
Sbjct: 15  HRLLPQIRSHSSSNQRENASQQEFSLPISRRSA-ILISSLPFTLVSV-SPSKARERRNKK 72

Query: 67  AIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
            IPLEDY T+ +GLKYYD+ EGKGPVA+KGSTVQV
Sbjct: 73  TIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQV 107

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491859|ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic [Vitis vinifera]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/70 (74%), Positives = 59/70 (84%), Gaps = 1/70 (1%)

Query: 32  IPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGP 91
           +PISRR A ILIS LPFSVIS P  S+ARERR KK IPLEDY T+ DGLKYYD+V+G GP
Sbjct: 1   MPISRRCA-ILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGP 59

Query: 92  VAQKGSTVQV 101
           VA+KGS+VQV
Sbjct: 60  VAEKGSSVQV 69

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467145|ref|XP_003603857.1| hypothetical protein MTR_3g115970 [Medicago truncatula] gi|355492905|gb|AES74108.1| hypothetical protein MTR_3g115970 [Medicago truncatula]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 61/75 (81%), Gaps = 2/75 (2%)

Query: 29  VVSIPISRRAAAILISSLPFSVISL--PKCSEARERRNKKAIPLEDYHTTSDGLKYYDIV 86
           VV++  SRR+ AILISSLPF+ + L  P  +EARERR KK IP++DY T+ DGLKYYD +
Sbjct: 39  VVALSQSRRSTAILISSLPFTFVFLSPPPPAEARERRKKKNIPIDDYITSPDGLKYYDFL 98

Query: 87  EGKGPVAQKGSTVQV 101
           EGKGP+A+KGSTVQV
Sbjct: 99  EGKGPIAEKGSTVQV 113

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539292|ref|XP_002510711.1| FK506 binding protein, putative [Ricinus communis] gi|223551412|gb|EEF52898.1| FK506 binding protein, putative [Ricinus communis]

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 2/102 (1%)

Query: 1   MASIRSFGKWTVDH-QICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEA 59
           MA   S  +  ++H +I  + +    KQ VVS P SRR A +L SSL  S+IS P+ +E 
Sbjct: 1   MALASSLERGAINHLRIISKQSQEPPKQVVVSTPTSRRCA-VLTSSLSLSLISFPQLAEG 59

Query: 60  RERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
           RERRNKK IPLEDY T+ DGLKYYD+VEGKGP+A+KGSTVQV
Sbjct: 60  RERRNKKNIPLEDYLTSPDGLKYYDVVEGKGPIAEKGSTVQV 101

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218039|ref|NP_173504.1| peptidylprolyl isomerase [Arabidopsis thaliana] gi|18203241|sp|Q9LM71.2|FKB18_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic; Short=PPIase FKBP18; AltName: Full=FK506-binding protein 18; Short=AtFKBP18; AltName: Full=Immunophilin FKBP18; AltName: Full=Rotamase; Flags: Precursor gi|26449905|dbj|BAC42074.1| unknown protein [Arabidopsis thaliana] gi|28827556|gb|AAO50622.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|332191905|gb|AEE30026.1| peptidylprolyl isomerase [Arabidopsis thaliana]

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 12/116 (10%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLN 104
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QV  +
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFD 116

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8886936|gb|AAF80622.1|AC069251_15 F2D10.32 [Arabidopsis thaliana]

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 12/116 (10%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLN 104
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QV  +
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFD 116

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845056|ref|XP_002890409.1| F2D10.32 [Arabidopsis lyrata subsp. lyrata] gi|297336251|gb|EFH66668.1| F2D10.32 [Arabidopsis lyrata subsp. lyrata]

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 14/116 (12%)

Query: 1   MASIRSFGKW-TVDHQICPQHTTIQAKQA-------VVSIPISRRAAAI-LISSLP---F 48
           MASI S   W +  H   P+  + +A Q        V  +PISRR A+I L+ SLP   F
Sbjct: 1   MASISSLHSWASTQHSRLPRIIS-EADQPRPIKQFVVFPVPISRRDASIILLGSLPLTSF 59

Query: 49  SVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLN 104
            VI  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA KGST QV  +
Sbjct: 60  FVIP-PSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATKGSTAQVHFD 114

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
TAIR|locus:2030502	232	AT1G20810 "AT1G20810" [Arabido	0.716	0.435	0.522	4.4e-20
UNIPROTKB|Q0E4I6	234	Os02g0117600 "Peptidyl-prolyl	0.453	0.273	0.575	1.6e-13

TAIR|locus:2030502 AT1G20810 "AT1G20810" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 59/113 (52%), Positives = 77/113 (68%)

Query:     1 MASIRSFGKWTVD-HQICPQHTTI-QAKQA-----VV--SIPISRR-AAAILISSLPFS- 49
             MASI S  +W  + H   P+ T+I +A Q+     VV  S+PISRR A+ IL+SS+P + 
Sbjct:     1 MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query:    50 -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
               +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QV
Sbjct:    61 FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQV 113

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0031977 "thylakoid lumen" evidence=IDA

UNIPROTKB|Q0E4I6 Os02g0117600 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 38/66 (57%), Positives = 46/66 (69%)

Query:    36 RRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQK 95
             RRAAA L+S+  F +   P    AR  R +  + LEDY T+ DGLKYYD+VEGKGP A+K
Sbjct:    53 RRAAAQLLSAAGFLIAVSPPSLAAR--RGRMVVSLEDYVTSPDGLKYYDLVEGKGPTAEK 110

Query:    96 GSTVQV 101
             GSTVQV
Sbjct:   111 GSTVQV 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 22  0.40    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  132 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.14u 0.13s 13.27t   Elapsed:  00:00:01
  Total cpu time:  13.14u 0.13s 13.27t   Elapsed:  00:00:01
  Start:  Sat May 11 05:00:55 2013   End:  Sat May 11 05:00:56 2013

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	141
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	6e-04

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
           N K   ++   T   GL+Y  +  G G   +KG TV V
Sbjct: 90  NAKEKGVK---TLPSGLQYKVLKAGDGAAPKKGDTVTV 124

Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	141
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.79
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.76
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.7
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.54
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.49
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.46
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.45
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	98.9
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	98.89
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	98.69
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.99
COG1047	174	SlpA FKBP-type peptidyl-prolyl cis-trans isomerase	97.84
PRK10737	196	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	97.65
COG0544	441	Tig FKBP-type peptidyl-prolyl cis-trans isomerase	97.44
PRK01490	435	tig trigger factor; Provisional	97.42
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	97.35

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=1.8e-19  Score=144.86  Aligned_cols=70  Identities=24%  Similarity=0.250  Sum_probs=63.4

Q ss_pred             ccCCCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHh
Q 032426           65 KKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGV  136 (141)
Q Consensus        65 ~~~~~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv  136 (141)
                      .++....++.+++|||+|.++++|+|+.|++|++|+|||+|+|.|    |++||        |.|+++  +||+|||||+
T Consensus        88 ~~~~k~~~v~~~~sgl~y~~~~~G~G~~~~~~~~V~vhY~G~l~~----G~vFDsS~~rg~p~~f~l~--~vI~Gw~egl  161 (205)
T COG0545          88 EKNAKEKGVKTLPSGLQYKVLKAGDGAAPKKGDTVTVHYTGTLID----GTVFDSSYDRGQPAEFPLG--GVIPGWDEGL  161 (205)
T ss_pred             hhhcccCCceECCCCcEEEEEeccCCCCCCCCCEEEEEEEEecCC----CCccccccccCCCceeecC--CeeehHHHHH
Confidence            345566778999999999999999999999999999999999997    99999        888875  9999999999


Q ss_pred             cccc
Q 032426          137 ETQI  140 (141)
Q Consensus       137 ~gm~  140 (141)
                      ++|=
T Consensus       162 ~~M~  165 (205)
T COG0545         162 QGMK  165 (205)
T ss_pred             hhCC
Confidence            9993

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=1e-18  Score=126.75  Aligned_cols=58  Identities=24%  Similarity=0.289  Sum_probs=54.8

Q ss_pred             CcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           79 GLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        79 GL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      |+....|..|+|. .|++||+|+|||+|.|.|    |++||        |.|++|.|+||||||||+.+|-
T Consensus         2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~d----G~kfDSs~dr~kPfkf~IGkgeVIkGwdegv~qms   68 (108)
T KOG0544|consen    2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQD----GKKFDSSRDRGKPFKFKIGKGEVIKGWDEGVAQMS   68 (108)
T ss_pred             CceeEEeeCCCCcccCCCCCEEEEEEEeEecC----CcEeecccccCCCeeEEecCcceeechhhcchhcc
Confidence            7889999999995 699999999999999996    99999        9999999999999999999994

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=2e-17  Score=134.94  Aligned_cols=64  Identities=34%  Similarity=0.418  Sum_probs=60.1

Q ss_pred             eeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE-------EE-EecCCCceecChHHHhcccc
Q 032426           74 HTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT-------FS-VVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        74 ~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~-f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++++||+|+|++.|+|+.|++|++|.|||.|++..   .|++||       |. |++|.|+||+|||.||.||=
T Consensus       116 ~tl~~Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~---~GkvFd~~~~~kp~~~f~lg~g~VIkG~d~gv~GMk  187 (226)
T KOG0552|consen  116 RTLPGGLRYEDLRVGSGPSAKKGKRVSVRYIGKLKG---NGKVFDSNFGGKPFKLFRLGSGEVIKGWDVGVEGMK  187 (226)
T ss_pred             eecCCCcEEEEEEecCCCCCCCCCEEEEEEEEEecC---CCeEeecccCCCCccccccCCCCCCchHHHhhhhhc
Confidence            578999999999999999999999999999999983   389998       77 99999999999999999993

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.54  E-value=1.3e-14  Score=116.34  Aligned_cols=67  Identities=18%  Similarity=0.199  Sum_probs=60.1

Q ss_pred             CCCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcc
Q 032426           67 AIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVET  138 (141)
Q Consensus        67 ~~~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~g  138 (141)
                      +...++++++||||+|+++++|+|+.|+.||+|.|||+|++.|    |++||        +.|.+  ++||+||++++.+
T Consensus        91 ~~k~~gv~~t~sGl~y~vi~~G~G~~p~~~d~V~v~Y~g~l~d----G~vfdss~~~g~P~~f~l--~~vipG~~eaL~~  164 (206)
T PRK11570         91 NAKKEGVNSTESGLQFRVLTQGEGAIPARTDRVRVHYTGKLID----GTVFDSSVARGEPAEFPV--NGVIPGWIEALTL  164 (206)
T ss_pred             hhhcCCcEECCCCcEEEEEeCCCCCCCCCCCEEEEEEEEEECC----CCEEEeccCCCCCeEEEe--echhhHHHHHHcC
Confidence            4456789999999999999999999999999999999999986    88887        56666  5799999999999


Q ss_pred             c
Q 032426          139 Q  139 (141)
Q Consensus       139 m  139 (141)
                      |
T Consensus       165 M  165 (206)
T PRK11570        165 M  165 (206)
T ss_pred             C
Confidence            8

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.49  E-value=8.5e-14  Score=109.40  Aligned_cols=68  Identities=18%  Similarity=0.243  Sum_probs=61.3

Q ss_pred             CCCCCceeCCCCcEEEEeec--CCCCCCCCCCEEEEEEEEEEeeccccceEEE-------EEEecCCCceecChHHHhcc
Q 032426           68 IPLEDYHTTSDGLKYYDIVE--GKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT-------FSVVLPRTNVTRHLNCGVET  138 (141)
Q Consensus        68 ~~~~~~~t~psGL~y~dl~~--G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~g  138 (141)
                      .+...+.++++|++|+++++  |+|..|+.||.|++||+|++.|    |++||       +.|.+|.+++|+||++|+.+
T Consensus        59 ~~~~~~~~t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~d----G~v~~ss~~~~P~~f~vg~~~vi~Gl~e~L~~  134 (177)
T TIGR03516        59 DSIVKYETSQNGFWYYYNQKDTGEGTTPEFGDLVTFEYDIRALD----GDVIYSEEELGPQTYKVDQQDLFSGLRDGLKL  134 (177)
T ss_pred             CCCCCceECCCccEEEEEEecCCCCCcCCCCCEEEEEEEEEeCC----CCEEEeCCCCCCEEEEeCCcchhHHHHHHHcC
Confidence            46677899999999999976  7778999999999999999996    88887       78888999999999999999


Q ss_pred             c
Q 032426          139 Q  139 (141)
Q Consensus       139 m  139 (141)
                      |
T Consensus       135 M  135 (177)
T TIGR03516       135 M  135 (177)
T ss_pred             C
Confidence            8

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.46  E-value=1.3e-13  Score=114.72  Aligned_cols=67  Identities=24%  Similarity=0.157  Sum_probs=59.0

Q ss_pred             CCCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcc
Q 032426           67 AIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVET  138 (141)
Q Consensus        67 ~~~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~g  138 (141)
                      +....++++++|||+|+++++|+|+.|+.||.|.|||+|++.|    |++||        +.|.  .+++|+||++++.+
T Consensus       135 ~~k~~gv~~t~sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~d----G~vfdss~~~g~p~~f~--l~~vipG~~EaL~~  208 (269)
T PRK10902        135 FAKEKGVKTTSTGLLYKVEKEGTGEAPKDSDTVVVNYKGTLID----GKEFDNSYTRGEPLSFR--LDGVIPGWTEGLKN  208 (269)
T ss_pred             hccCCCcEECCCccEEEEEeCCCCCCCCCCCEEEEEEEEEeCC----CCEeeccccCCCceEEe--cCCcchHHHHHHhc
Confidence            3456789999999999999999999999999999999999985    88887        3444  46899999999999


Q ss_pred             c
Q 032426          139 Q  139 (141)
Q Consensus       139 m  139 (141)
                      |
T Consensus       209 M  209 (269)
T PRK10902        209 I  209 (269)
T ss_pred             C
Confidence            8

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.45  E-value=9.5e-14  Score=110.42  Aligned_cols=60  Identities=20%  Similarity=0.165  Sum_probs=50.7

Q ss_pred             CCCcEEEEeec--CCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           77 SDGLKYYDIVE--GKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        77 psGL~y~dl~~--G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++|++.+++.  .-..++++||++.+||+|.+.|    |++||        |.|++|.||||||||+|+.||.
T Consensus        67 ~~~l~I~v~~~p~~C~~kak~GD~l~~HY~g~leD----Gt~fdSS~~rg~P~~f~LG~gqVIkG~Dqgl~gMC  136 (188)
T KOG0549|consen   67 DEELQIGVLKKPEECPEKAKKGDTLHVHYTGSLED----GTKFDSSYSRGAPFTFTLGTGQVIKGWDQGLLGMC  136 (188)
T ss_pred             CCceeEEEEECCccccccccCCCEEEEEEEEEecC----CCEEeeeccCCCCEEEEeCCCceeccHhHHhhhhC
Confidence            34556655554  2456789999999999999996    99998        9999999999999999999995

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=98.90  E-value=1.3e-09  Score=95.25  Aligned_cols=50  Identities=26%  Similarity=0.294  Sum_probs=46.7

Q ss_pred             ecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE-------EEEecCCCceecChHHHhccc
Q 032426           86 VEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT-------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        86 ~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ++|+|. .|..|++|.|||+|+|.|    |++||       |.|.+|.|+||+|||+|+..|
T Consensus         1 ~eg~g~~~p~~g~~v~~hytg~l~d----gt~fdss~d~~~~~~~lg~g~vi~~~~~gv~tm   58 (397)
T KOG0543|consen    1 KEGTGTETPMTGDKVEVHYTGTLLD----GTKFDSSRDGDPFKFDLGKGSVIKGWDLGVATM   58 (397)
T ss_pred             CCCCCccCCCCCceeEEEEeEEecC----CeecccccCCCceeeecCCCccccccccccccc
Confidence            478896 699999999999999996    99998       999999999999999999998

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=98.89  E-value=3.3e-09  Score=73.27  Aligned_cols=45  Identities=22%  Similarity=0.189  Sum_probs=41.2

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +|+.||+|++||++++.+    |+.|+        |.|.+|.+++|+||++++.+|-
T Consensus         4 ~~~~gd~V~i~y~~~~~~----g~~~~~~~~~~~~~~~~~g~~~~i~g~e~al~~m~   56 (94)
T PF00254_consen    4 TPKEGDTVTIHYTGRLED----GKVFDSSYQEGEPFEFRLGSGQVIPGLEEALIGMK   56 (94)
T ss_dssp             SBSTTSEEEEEEEEEETT----SEEEEETTTTTSEEEEETTSSSSSHHHHHHHTTSB
T ss_pred             cCCCCCEEEEEEEEEECC----CcEEEEeeecCcceeeeeccCccccchhhhccccc
Confidence            499999999999999974    78887        8899999999999999999994

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=98.69  E-value=2.9e-08  Score=76.56  Aligned_cols=44  Identities=16%  Similarity=0.030  Sum_probs=40.5

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ++++|+.|++||++++.|    |++||        +.|.+|.|++|+||++++.||
T Consensus         4 ~i~~~~~V~v~Y~~~~~d----G~v~dst~~~~~P~~f~~G~g~vi~gle~aL~gm   55 (156)
T PRK15095          4 SVQSNSAVLVHFTLKLDD----GSTAESTRNNGKPALFRLGDGSLSEGLEQQLLGL   55 (156)
T ss_pred             ccCCCCEEEEEEEEEeCC----CCEEEECCCCCCCEEEEeCCCCccHHHHHHHcCC
Confidence            578999999999999985    88887        788999999999999999998

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.99  E-value=1.4e-05  Score=70.30  Aligned_cols=58  Identities=28%  Similarity=0.308  Sum_probs=52.0

Q ss_pred             CCCcEEEEeecCCC--CCCCCCCEEEEEEEEEEeeccccceEEE-----EEEecCC-CceecChHHHhccc
Q 032426           77 SDGLKYYDIVEGKG--PVAQKGSTVQVGLNFKVEFQRYIIIVFT-----FSVVLPR-TNVTRHLNCGVETQ  139 (141)
Q Consensus        77 psGL~y~dl~~G~G--~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd-----f~f~~g~-G~VIkGwDeGv~gm  139 (141)
                      ..+|..+++++|.|  ..|..|..|.|||.|++.|     .+|+     |.|..|. ..||.|||.+|..|
T Consensus        83 Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~-----~~f~~~~~~fe~~~Ge~~~vi~Gle~al~~M  148 (397)
T KOG0543|consen   83 DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELED-----GVFDQRELRFEFGEGEDIDVIEGLEIALRMM  148 (397)
T ss_pred             CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEECC-----cceeccccceEEecCCccchhHHHHHHHHhc
Confidence            78999999999999  5799999999999999995     3777     8888887 57999999999988

>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

Probab=97.84  E-value=3.3e-05  Score=61.29  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=39.8

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      +..+|+.|++||++++.|    |.+||        +.|.+|.|++|+|+|+++.||
T Consensus         2 ~i~k~~~V~i~Y~~~~~d----g~v~Dtt~e~~~P~~~i~G~g~li~glE~al~g~   53 (174)
T COG1047           2 KIEKGDVVSLHYTLKVED----GEVVDTTDENYGPLTFIVGAGQLIPGLEEALLGK   53 (174)
T ss_pred             cccCCCEEEEEEEEEecC----CcEEEcccccCCCeEEEecCCCcchhHHHHHhCC
Confidence            357899999999999996    88888        678899999999999999998

>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=97.65  E-value=7.8e-05  Score=59.99  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=39.7

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEEE-------EEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVFT-------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++++.|++||+.++.+    |.+||       +.|.+|.+++|+|++++|.||-
T Consensus         3 I~~~~vV~l~Y~l~~~d----G~v~dst~~~~Pl~~~~G~g~lipglE~aL~G~~   53 (196)
T PRK10737          3 VAKDLVVSLAYQVRTED----GVLVDESPVSAPLDYLHGHGSLISGLETALEGHE   53 (196)
T ss_pred             cCCCCEEEEEEEEEeCC----CCEEEecCCCCCeEEEeCCCcchHHHHHHHcCCC
Confidence            57899999999999985    78887       7889999999999999999983

>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]

Probab=97.44  E-value=0.00016  Score=64.30  Aligned_cols=42  Identities=19%  Similarity=0.195  Sum_probs=38.1

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ++.||.|+++|.|+..     |..|.      |.+.+|.|++|+||+.++.||
T Consensus       158 a~~gD~v~IDf~g~iD-----g~~fegg~ae~~~l~lGs~~fipgFe~~LvG~  205 (441)
T COG0544         158 AENGDRVTIDFEGSVD-----GEEFEGGKAENFSLELGSGRFIPGFEDQLVGM  205 (441)
T ss_pred             cccCCEEEEEEEEEEc-----CeeccCccccCeEEEEcCCCchhhHHhhhccC
Confidence            8899999999999654     66665      999999999999999999998

>PRK01490 tig trigger factor; Provisional

Probab=97.42  E-value=0.00021  Score=62.17  Aligned_cols=44  Identities=16%  Similarity=0.132  Sum_probs=38.9

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++.||.|.+||+|+..     |..|+      |.|.+|.+++|+||++++.||-
T Consensus       157 ~~~~gD~V~vd~~~~~~-----g~~~~~~~~~~~~~~lg~~~~~~~fee~L~G~k  206 (435)
T PRK01490        157 PAENGDRVTIDFVGSID-----GEEFEGGKAEDFSLELGSGRFIPGFEEQLVGMK  206 (435)
T ss_pred             cCCCCCEEEEEEEEEEC-----CEECcCCCCCceEEEEcCCCcchhHHHHhCCCC
Confidence            47899999999999984     66665      8899999999999999999983

>TIGR00115 tig trigger factor

Probab=97.35  E-value=0.00024  Score=61.20  Aligned_cols=45  Identities=18%  Similarity=0.170  Sum_probs=38.5

Q ss_pred             CCCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           91 PVAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        91 ~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..++.||.|.|||+|+..     |..|+      +.|.+|.+++|+||++++.||-
T Consensus       145 ~~~~~gD~V~v~~~~~~d-----g~~~~~~~~~~~~~~lg~~~~~~~~ee~L~G~k  195 (408)
T TIGR00115       145 RAAEKGDRVTIDFEGFID-----GEAFEGGKAENFSLELGSGQFIPGFEEQLVGMK  195 (408)
T ss_pred             cccCCCCEEEEEEEEEEC-----CEECcCCCCCCeEEEECCCCcchhHHHHhCCCC
Confidence            357889999999999763     66665      8889999999999999999983

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	141
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	1e-05
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	1e-05
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	4e-05
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	6e-05
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	8e-05
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	1e-04
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	3e-04
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	5e-04

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 58  EARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
                 +++ I      TT  GLKY D+ EG G  A+ G TV V
Sbjct: 84  NDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSV 127

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 71  EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
            ++  +  GL + D V G GP A KG  ++ 
Sbjct: 5   CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKA 35

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
                      TT  GLKY D+ EG G  A+ G TV V
Sbjct: 17  RGSH---MTVVTTESGLKYEDLTEGSGAEARAGQTVSV 51

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 54  PKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
                  ER +++ + +    +   G+    I EG G +    ++V V
Sbjct: 6   APGQSLYERLSQRMLDI----SGDRGVLKDVIREGAGDLVAPDASVLV 49

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 39.4 bits (92), Expect = 8e-05
 Identities = 7/31 (22%), Positives = 11/31 (35%)

Query: 71  EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
            +     + +    I EG G    K ST  +
Sbjct: 42  SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFL 72

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 3/38 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
            K           +DG+   ++  G GP       V+V
Sbjct: 106 EKAK---PGVKELADGILMTELTPGTGPKPDANGRVEV 140

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 3/38 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
           NK             GL+Y  I  G G    K  TV V
Sbjct: 95  NKNK---PGVVVLPSGLQYKVINSGNGVKPGKSDTVTV 129

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 37.8 bits (88), Expect = 5e-04
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
             K    +   T+S GL Y  +  GKG   +   TV V
Sbjct: 110 FAKE---KGVKTSSTGLVYQVVEAGKGEAPKDSDTVVV 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	141
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.73
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.64
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.63
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.62
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.62
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.6
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.6
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.59
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.59
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.59
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.58
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.58
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.57
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.57
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.56
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.56
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.55
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.55
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.54
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.54
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.53
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.52
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	99.48
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.41
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.38
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.35
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.27
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.15
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	99.13
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	99.1
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	99.06
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	98.83
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	98.81
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	98.67
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	98.64
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	98.52
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	98.47
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	98.4
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	98.34
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	98.29
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	98.28
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	98.21
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	93.72

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.73  E-value=1.2e-18  Score=134.60  Aligned_cols=64  Identities=17%  Similarity=0.137  Sum_probs=57.6

Q ss_pred             eCCCCcEEEEeecCCCCCC--CCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           75 TTSDGLKYYDIVEGKGPVA--QKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        75 t~psGL~y~dl~~G~G~~p--~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++.+||+|+++++|+|+.|  ++|++|+|||+|+|.|.  +|++||        |.|.+|.|+||+|||+||.+|-
T Consensus         7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~--~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~   80 (165)
T 2lkn_A            7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDD--EGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMR   80 (165)
T ss_dssp             HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSS--SCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCC
T ss_pred             ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCC--CccEEEecccCCCCEEEEecCCCccHHHHHHHhcCc
Confidence            5789999999999999765  68999999999999642  389999        9999999999999999999994

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.64  E-value=3.5e-16  Score=114.26  Aligned_cols=65  Identities=25%  Similarity=0.335  Sum_probs=60.1

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcc
Q 032426           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVET  138 (141)
Q Consensus        70 ~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~g  138 (141)
                      ..++.++++||+|+++++|+|..|+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||++++.|
T Consensus         4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G   76 (129)
T 1u79_A            4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN----GKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILG   76 (129)
T ss_dssp             -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT----SCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHC
T ss_pred             CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECC----CCEEEecCCCCCCEEEEeCCCCccHHHHHHhcc
Confidence            4568899999999999999999999999999999999975    88888        88999999999999999988

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.63  E-value=7.6e-16  Score=113.77  Aligned_cols=66  Identities=33%  Similarity=0.347  Sum_probs=60.9

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        71 ~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++.++++||+|+++++|+|..|+.||.|.|||+|++.|    |++||        |.|.+|.|++|+||+++|.||=
T Consensus        21 ~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk   94 (133)
T 2y78_A           21 MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD----GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMK   94 (133)
T ss_dssp             TCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETT----SCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCB
T ss_pred             CCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC----CCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCC
Confidence            457789999999999999999999999999999999964    88887        8899999999999999999993

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.62  E-value=7.6e-16  Score=117.48  Aligned_cols=64  Identities=22%  Similarity=0.205  Sum_probs=59.0

Q ss_pred             ceeCCCCc-EEEEeecCCCC--CCCCCCEEEEEEEEEEeeccccceEEE----EEEecCCCceecChHHHhcccc
Q 032426           73 YHTTSDGL-KYYDIVEGKGP--VAQKGSTVQVGLNFKVEFQRYIIIVFT----FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        73 ~~t~psGL-~y~dl~~G~G~--~p~~Gd~V~VhY~G~l~~~~~~G~~Fd----f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..+++||+ +|+++++|+|+  .|+.||.|+|||+|++.|    |++||    |.|.+|.|+||+||+++|.||=
T Consensus        37 ~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~d----G~~fds~~p~~f~lG~g~vi~G~eeaL~gMk  107 (157)
T 2jwx_A           37 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN----GTRVQEEPELVFTLGDCDVIQALDLSVPLMD  107 (157)
T ss_dssp             EESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTT----SCEEEEEEEEEEETTTTSSCHHHHHHTTTSC
T ss_pred             ceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECC----CCEeecCCCEEEEeCCCChhHHHHHHHcCCC
Confidence            44889998 89999999998  899999999999999975    89998    8999999999999999999993

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.62  E-value=8.1e-16  Score=109.34  Aligned_cols=63  Identities=17%  Similarity=0.229  Sum_probs=58.1

Q ss_pred             eeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           74 HTTSDGLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        74 ~t~psGL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++++||+|+++++|+|+. |+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||++++.||=
T Consensus         2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d----G~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~   73 (113)
T 1yat_A            2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN----GQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLS   73 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT----SCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCC
T ss_pred             CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECC----CCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCC
Confidence            3689999999999999998 99999999999999974    78887        8899999999999999999993

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.60  E-value=9e-16  Score=117.99  Aligned_cols=65  Identities=15%  Similarity=0.132  Sum_probs=59.3

Q ss_pred             CCCceeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           70 LEDYHTTSDGLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        70 ~~~~~t~psGL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..++.++++||+|+++++|+|+. |+.||.|.|||+|++.|    |++||        |.|.+  |+||+||++||.||=
T Consensus        29 ~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~d----G~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk  102 (167)
T 1jvw_A           29 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD----GTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMR  102 (167)
T ss_dssp             STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT----SCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCC
T ss_pred             CCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECC----CCEEeeccccCCCEEEEe--CchhHHHHHHHcCCC
Confidence            46789999999999999999998 99999999999999975    88998        67776  799999999999993

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.3e-15  Score=110.12  Aligned_cols=67  Identities=22%  Similarity=0.175  Sum_probs=60.4

Q ss_pred             CCCceeCCCC-cEEEEeecCCCC--CCCCCCEEEEEEEEEEeeccccceEEE----EEEecCCCceecChHHHhcccc
Q 032426           70 LEDYHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVGLNFKVEFQRYIIIVFT----FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        70 ~~~~~t~psG-L~y~dl~~G~G~--~p~~Gd~V~VhY~G~l~~~~~~G~~Fd----f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+....++|| |+|+++++|+|+  .|+.||.|.|||+|++.|    |++||    |.|.+|.+++|+||+++|.||=
T Consensus         8 ~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~d----G~~fds~~p~~f~lG~g~~i~G~e~~L~gm~   81 (135)
T 2d9f_A            8 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN----GTRVQEEPELVFTLGDCDVIQALDLSVPLMD   81 (135)
T ss_dssp             SSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESS----SCEEEEEEEEEEETTSCCSCTTTTTTGGGSC
T ss_pred             ccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC----CCEEecCCCEEEEeCCCChhHHHHHHHhCCC
Confidence            3445678888 999999999998  899999999999999975    88897    8999999999999999999993

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.59  E-value=1.1e-15  Score=112.33  Aligned_cols=70  Identities=20%  Similarity=0.189  Sum_probs=62.8

Q ss_pred             CCCCCCceeCCCCcEEE--EeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHH
Q 032426           67 AIPLEDYHTTSDGLKYY--DIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCG  135 (141)
Q Consensus        67 ~~~~~~~~t~psGL~y~--dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeG  135 (141)
                      +.....+.++++||+|+  ++++|+|+. |+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||+++
T Consensus        11 ~~~~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~g~vi~G~e~a   86 (130)
T 2lgo_A           11 TLEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPD----GKQFDSSRSRGKPFQFTLGAGEVIKGWDQG   86 (130)
T ss_dssp             CSCCSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTT----SCEEECTTTTTCCEEEETTSTTSCHHHHHH
T ss_pred             ccccccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECC----CCEEEccCcCCCCEEEEeCCCCccHHHHHH
Confidence            34556678899999999  999999998 99999999999999864    78887        88999999999999999


Q ss_pred             hcccc
Q 032426          136 VETQI  140 (141)
Q Consensus       136 v~gm~  140 (141)
                      |.||=
T Consensus        87 L~gm~   91 (130)
T 2lgo_A           87 VATMT   91 (130)
T ss_dssp             HHHSC
T ss_pred             HhCCC
Confidence            99983

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.59  E-value=2.6e-15  Score=107.82  Aligned_cols=65  Identities=22%  Similarity=0.176  Sum_probs=58.9

Q ss_pred             CceeCCCC-cEEEEeecCCCC--CCCCCCEEEEEEEEEEeeccccceEEE----EEEecCCCceecChHHHhcccc
Q 032426           72 DYHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVGLNFKVEFQRYIIIVFT----FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        72 ~~~t~psG-L~y~dl~~G~G~--~p~~Gd~V~VhY~G~l~~~~~~G~~Fd----f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ...+++|| |+|+++++|+|+  .|+.||.|.|||+|++.|    |++||    |.|.+|.+++|+||++++.||=
T Consensus         6 ~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~d----G~~~ds~~p~~f~lG~~~~i~g~e~~l~gm~   77 (118)
T 2awg_A            6 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN----GTRVQEEPELVFTLGDCDVIQALDLSVPLMD   77 (118)
T ss_dssp             EEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTT----SCEEEEEEEEEEETTSSCSCHHHHHHGGGSC
T ss_pred             ceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC----CCEEECCCCEEEEECCCChhHHHHHHHhCCC
Confidence            34567888 999999999998  799999999999999875    88887    8999999999999999999993

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.59  E-value=2.6e-15  Score=107.42  Aligned_cols=61  Identities=16%  Similarity=0.072  Sum_probs=55.1

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---------------EEEecCCCceecChHHHhccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---------------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---------------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      +|+||+|+++++|+|. .|+.||.|.|||+|++.|    |++||               |.|.+|.+++|+||+++|.||
T Consensus         2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~d----G~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm   77 (119)
T 3kz7_A            2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPD----GTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTM   77 (119)
T ss_dssp             CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTT----SCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTC
T ss_pred             CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECC----CCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCC
Confidence            6999999999999996 599999999999999975    66665               568899999999999999999


Q ss_pred             c
Q 032426          140 I  140 (141)
Q Consensus       140 ~  140 (141)
                      -
T Consensus        78 ~   78 (119)
T 3kz7_A           78 S   78 (119)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.58  E-value=2.9e-15  Score=119.29  Aligned_cols=66  Identities=20%  Similarity=0.146  Sum_probs=60.0

Q ss_pred             CCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           69 PLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        69 ~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ...++.++++||+|+++++|+|+.|+.||.|.|||+|++.|    |++||        |.|.+  |+||+||+++|.||=
T Consensus        97 ~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d----G~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk  170 (213)
T 1fd9_A           97 NKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID----GTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMP  170 (213)
T ss_dssp             HSTTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCC
T ss_pred             ccCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECC----CCEEeeccccCCCEEEEc--CchhhHHHHHHcCCC
Confidence            34678999999999999999999999999999999999985    88998        77777  799999999999993

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.58  E-value=2.2e-15  Score=120.86  Aligned_cols=67  Identities=15%  Similarity=0.161  Sum_probs=60.7

Q ss_pred             CCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE-----EEEecCCCceecChHHHhcccc
Q 032426           68 IPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT-----FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        68 ~~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd-----f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ...+++.++||||+|+++++|+|+.|+.||.|.|||+|++.|    |++||     |.|.+|  +||+||++|+.+|=
T Consensus       107 ~~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~d----G~vfDss~~P~~f~lG--~vI~G~eeaL~gMk  178 (219)
T 3oe2_A          107 KAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD----GKIFDQSTQPQWFRLD--SVISGWTSALQNMP  178 (219)
T ss_dssp             HTSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTT----SCEEEECSSCEEEEGG--GSCHHHHHHHTTCC
T ss_pred             ccCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECC----CCEeeccCCcEEEEec--chhHHHHHHHhCCC
Confidence            345678999999999999999999999999999999999985    89998     778774  99999999999993

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.57  E-value=3.4e-15  Score=115.52  Aligned_cols=67  Identities=19%  Similarity=0.135  Sum_probs=61.0

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCC-ceecChHHHhcccc
Q 032426           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRT-NVTRHLNCGVETQI  140 (141)
Q Consensus        71 ~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G-~VIkGwDeGv~gm~  140 (141)
                      .++.++++||+|+++++|+|..|+.||.|.|||+|++.+   +|++||        |.|.+|.| +||+||++||.||=
T Consensus        42 ~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~---dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk  117 (180)
T 2f4e_A           42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN---SQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMK  117 (180)
T ss_dssp             SCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETT---TCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCC
T ss_pred             CCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECC---CCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCC
Confidence            457889999999999999999999999999999999973   278887        88999999 99999999999993

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.57  E-value=5e-15  Score=107.05  Aligned_cols=66  Identities=11%  Similarity=-0.033  Sum_probs=59.5

Q ss_pred             CCceeCCCCcEEEEeecCC--CCCCCCCCEEEEEEEEEEe-eccccceEEE----------EEEecCCCceecChHHHhc
Q 032426           71 EDYHTTSDGLKYYDIVEGK--GPVAQKGSTVQVGLNFKVE-FQRYIIIVFT----------FSVVLPRTNVTRHLNCGVE  137 (141)
Q Consensus        71 ~~~~t~psGL~y~dl~~G~--G~~p~~Gd~V~VhY~G~l~-~~~~~G~~Fd----------f~f~~g~G~VIkGwDeGv~  137 (141)
                      .+..++++||+|+++++|+  |..|+.||.|.|||+|++. |    |++||          |.|.+|.+++|+||+++|.
T Consensus         5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~d----G~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~   80 (125)
T 4dip_A            5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKD----GSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLK   80 (125)
T ss_dssp             CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTT----CCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHST
T ss_pred             CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCC----CcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHh
Confidence            3456789999999999998  8899999999999999997 5    78887          7889999999999999999


Q ss_pred             ccc
Q 032426          138 TQI  140 (141)
Q Consensus       138 gm~  140 (141)
                      ||=
T Consensus        81 gm~   83 (125)
T 4dip_A           81 GMC   83 (125)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            993

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.56  E-value=5.6e-15  Score=116.77  Aligned_cols=65  Identities=34%  Similarity=0.362  Sum_probs=60.7

Q ss_pred             CceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           72 DYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        72 ~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+.++++||+|+++++|+|..|+.||.|.|||+|++.|    |++||        |.|.+|.|++|+||++|+.||=
T Consensus        98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~d----G~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~  170 (209)
T 3uf8_A           98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD----GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMK  170 (209)
T ss_dssp             CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETT----SCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCB
T ss_pred             cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECC----CCEEEEccccCCCEEEEeCCCccchhHHHHHhCCC
Confidence            37789999999999999999999999999999999975    88998        8899999999999999999993

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.56  E-value=6.5e-15  Score=108.55  Aligned_cols=61  Identities=31%  Similarity=0.313  Sum_probs=56.7

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||+|+++++|+|. .|+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||++++.||=
T Consensus        12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~   81 (135)
T 1r9h_A           12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN----GTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMT   81 (135)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCC
T ss_pred             CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECC----CCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCC
Confidence            6899999999999997 699999999999999965    88888        8899999999999999999993

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.55  E-value=9e-15  Score=106.61  Aligned_cols=62  Identities=23%  Similarity=0.202  Sum_probs=57.3

Q ss_pred             eCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           75 TTSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        75 t~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..++||+|+++++|+|. .|+.||.|.|||+|++.|    |++||        |.|.+|.|++|+||+++|.||=
T Consensus        16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~   86 (128)
T 3o5q_A           16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN----GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK   86 (128)
T ss_dssp             SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred             cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECC----CCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCC
Confidence            36789999999999997 699999999999999975    88998        8899999999999999999993

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.55  E-value=9.6e-15  Score=102.49  Aligned_cols=58  Identities=26%  Similarity=0.315  Sum_probs=54.1

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           79 GLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        79 GL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ||+|+++++|+|+. |+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||++++.||=
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d----G~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~   67 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED----GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMS   67 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCC
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEECC----CCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCC
Confidence            79999999999987 99999999999999975    88887        8899999999999999999993

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.54  E-value=1e-14  Score=116.92  Aligned_cols=65  Identities=25%  Similarity=0.226  Sum_probs=59.0

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        70 ~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+++.+++|||+|+++++|+|..|+.||.|.|||+|++.|    |++||        |.|.+  |+||+||+++|.||=
T Consensus       113 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d----G~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk  185 (224)
T 1q6h_A          113 EKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID----GKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIK  185 (224)
T ss_dssp             STTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT----SCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSC
T ss_pred             CCCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCC----CCEEeeccccCCCEEEEc--CCcchhHHHHHcCCC
Confidence            4678889999999999999999999999999999999985    88888        67776  799999999999993

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.54  E-value=1.1e-14  Score=108.47  Aligned_cols=61  Identities=23%  Similarity=0.205  Sum_probs=56.9

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++||+|+++++|+|. .|+.||.|.|||+|++.|    |++||        |.|.+|.|+||+||+++|.||=
T Consensus        33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~  102 (144)
T 3o5e_A           33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN----GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK  102 (144)
T ss_dssp             CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTT----SCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred             CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECC----CCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCC
Confidence            5789999999999998 699999999999999975    88998        8999999999999999999993

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.53  E-value=1.3e-14  Score=105.60  Aligned_cols=68  Identities=24%  Similarity=0.240  Sum_probs=57.9

Q ss_pred             CCCCceeCCCCcEEE-EeecC---CCCCCCCCCEEEEEEEEEE-eeccccceEEE--------EEEecCCCceecChHHH
Q 032426           69 PLEDYHTTSDGLKYY-DIVEG---KGPVAQKGSTVQVGLNFKV-EFQRYIIIVFT--------FSVVLPRTNVTRHLNCG  135 (141)
Q Consensus        69 ~~~~~~t~psGL~y~-dl~~G---~G~~p~~Gd~V~VhY~G~l-~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeG  135 (141)
                      ...++.+++||+.|+ ++++|   +|..|+.||.|.|||+|++ .|    |++||        |.|.+|.|++|+||+++
T Consensus         6 ~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~d----G~~fd~s~~~~~p~~f~lG~g~~i~g~e~~   81 (129)
T 2vn1_A            6 EFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLEST----GKVFDSSFDRNVPFKFHLEQGEVIKGWDIC   81 (129)
T ss_dssp             -CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTT----CCEEEEGGGTTCCEEEETTSSSSCHHHHHH
T ss_pred             ccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCC----CeEEEecCCCCccEEEEeCCCCcCHHHHHH
Confidence            345677889998885 77855   6789999999999999999 54    88887        88999999999999999


Q ss_pred             hcccc
Q 032426          136 VETQI  140 (141)
Q Consensus       136 v~gm~  140 (141)
                      |.||=
T Consensus        82 l~gm~   86 (129)
T 2vn1_A           82 VSSMR   86 (129)
T ss_dssp             HTTCC
T ss_pred             HhCCC
Confidence            99993

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.52  E-value=3.9e-15  Score=109.62  Aligned_cols=63  Identities=17%  Similarity=0.116  Sum_probs=54.6

Q ss_pred             eeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           74 HTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        74 ~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      .++++||+|+++++|+|..++.||.|.|||+|++.+   +|++||        |.|.+|.|++|+||+++|.||
T Consensus        22 v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~---~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm   92 (134)
T 3b7x_A           22 ISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEH---MDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSM   92 (134)
T ss_dssp             SSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTT---CSSCSEEC-------CEEC-CCCCCHHHHHHHHTC
T ss_pred             eeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC---CCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCC
Confidence            457899999999999999999999999999999973   166665        778999999999999999999

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=99.48  E-value=3.3e-14  Score=115.50  Aligned_cols=67  Identities=19%  Similarity=0.135  Sum_probs=60.2

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCC-ceecChHHHhcccc
Q 032426           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRT-NVTRHLNCGVETQI  140 (141)
Q Consensus        71 ~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G-~VIkGwDeGv~gm~  140 (141)
                      .++.++++||+|+++++|+|..|+.||.|+|||+|++.+   +|++||        |.|.+|.| +||+||++||.||-
T Consensus        42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~---~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~  117 (338)
T 2if4_A           42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKN---SQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMK  117 (338)
T ss_dssp             SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETT---TCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCC
T ss_pred             cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcC---CCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCC
Confidence            346778999999999999999999999999999999974   267777        88999999 99999999999993

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.41  E-value=3.4e-13  Score=110.45  Aligned_cols=61  Identities=21%  Similarity=0.146  Sum_probs=56.8

Q ss_pred             CCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           76 TSDGLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||+|+++++|+|.. |+.||.|+|||+|++.|    |++||        |.|.+|.++||+||+++|.||=
T Consensus        49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~  118 (280)
T 1q1c_A           49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD----GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMK  118 (280)
T ss_dssp             CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT----SCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCC
T ss_pred             CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECC----CCEEEecccCCCCEEEEECCcChhHHHHHHHhcCC
Confidence            58999999999999997 99999999999999975    88887        8899999999999999999993

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.38  E-value=1.6e-13  Score=115.86  Aligned_cols=62  Identities=23%  Similarity=0.192  Sum_probs=41.8

Q ss_pred             eCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           75 TTSDGLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        75 t~psGL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++++||+|+++++|+|.. |+.||.|.|||+|++.|    |++||        |.|.+|.|+||+||++||.||=
T Consensus        28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~----g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~   98 (457)
T 1kt0_A           28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN----GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK   98 (457)
T ss_dssp             -----CEEEC--------CCCBTCEEEEEEEEEC---------CBC------CEEEETTSTTSCHHHHHHHTTCC
T ss_pred             CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECC----CCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCC
Confidence            468999999999999997 99999999999999965    77776        7899999999999999999993

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.35  E-value=7.8e-14  Score=116.67  Aligned_cols=64  Identities=23%  Similarity=0.251  Sum_probs=0.0

Q ss_pred             ceeCCCCcEEEEeecCCC-CCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           73 YHTTSDGLKYYDIVEGKG-PVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        73 ~~t~psGL~y~dl~~G~G-~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..++++||+|+++++|+| +.|+.||.|.|||+|++.|    |++||        |.|.+|.|++|+||++|+.||-
T Consensus         6 ~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~d----G~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~   78 (356)
T 3jxv_A            6 NEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLD----GKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMK   78 (356)
T ss_dssp             -----------------------------------------------------------------------------
T ss_pred             ceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECC----CCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCC
Confidence            456899999999999999 6799999999999999986    77777        7788999999999999999993

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.27  E-value=6.1e-12  Score=105.15  Aligned_cols=60  Identities=20%  Similarity=0.171  Sum_probs=55.7

Q ss_pred             CCCcEEEEeecCCC-CCCCCCCEEEEEEEEEEeeccccceEEE---------EEEecCCCceecChHHHhcccc
Q 032426           77 SDGLKYYDIVEGKG-PVAQKGSTVQVGLNFKVEFQRYIIIVFT---------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        77 psGL~y~dl~~G~G-~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+|++|+++++|+| ..|+.||.|+|||+|++.|    |++||         |.|.+|.|+||+|||++|.||-
T Consensus       243 d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~d----G~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~  312 (356)
T 3jxv_A          243 DKKILKKVLKEXEGYERPNEGAVVTVKITGKLQD----GTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMK  312 (356)
T ss_dssp             TCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESS----SCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCC
T ss_pred             ccceeEEeeecccccCCCCCCCEEEEEEEEEECC----CCEEeeccccCCcCEEEEECCCccchHHHHHHhCCC
Confidence            57999999999999 6899999999999999985    88887         8899999999999999999993

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.15  E-value=7.3e-11  Score=96.55  Aligned_cols=60  Identities=15%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---EEEecCCCc---eecChHHHhcccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---FSVVLPRTN---VTRHLNCGVETQI  140 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---f~f~~g~G~---VIkGwDeGv~gm~  140 (141)
                      .++||+|+++++|+|. .|+.||.|.|||+|++ +    |++||   |.|.+|.|+   +|+|||++|.||-
T Consensus       166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-d----G~~fd~~~~~f~lG~g~~~~~i~G~e~~l~gmk  232 (280)
T 1q1c_A          166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K----DKLFDQRELRFEIGEGENLDLPYGLERAIQRME  232 (280)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-T----TEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred             cccceeEEeeecccccccccCCceEEEEEEEEe-C----CEEEecCCeEEEecCCcccccchhHHHHHhCCC
Confidence            4579999999999998 5999999999999998 4    88998   999999998   5999999999994

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=99.13  E-value=1e-10  Score=94.63  Aligned_cols=61  Identities=15%  Similarity=0.157  Sum_probs=55.3

Q ss_pred             eeCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---EEEecCCCc---eecChHHHhccc
Q 032426           74 HTTSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---FSVVLPRTN---VTRHLNCGVETQ  139 (141)
Q Consensus        74 ~t~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---f~f~~g~G~---VIkGwDeGv~gm  139 (141)
                      .+.++||+|+++++|+|. .|+.|++|+|||+|++ +    |.+||   +.|.+|.|+   +|+||++++.+|
T Consensus        21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~----g~~fd~~~~~f~lG~g~~~~~~~~~e~al~~~   88 (336)
T 1p5q_A           21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K----DKLFDQRELRFEIGEGENLDLPYGLERAIQRM   88 (336)
T ss_dssp             -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T----TEEEEEEEEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred             ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C----CEEEecCCeEEEeCCCCccccchHHHHHHhcC
Confidence            456899999999999998 6999999999999998 4    89999   889999987   599999999998

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=99.10  E-value=6.6e-11  Score=82.23  Aligned_cols=47  Identities=19%  Similarity=0.159  Sum_probs=42.4

Q ss_pred             CCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           90 GPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        90 G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      |.+|+.||.|.|||+|++.|    |++||        |.|.+|.+++|+||++++.||=
T Consensus         3 g~~~~~gd~V~v~y~~~~~d----G~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~   57 (102)
T 2pbc_A            3 PIKSRKGDVLHMHYTGKLED----GTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMC   57 (102)
T ss_dssp             CCCCCTTCEEEEEEEEECTT----SCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCC
T ss_pred             CCcCCCCCEEEEEEEEEECC----CCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCC
Confidence            56799999999999999864    78887        8899999999999999999993

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=99.06  E-value=9.6e-11  Score=84.41  Aligned_cols=46  Identities=7%  Similarity=0.083  Sum_probs=40.5

Q ss_pred             CCCCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           90 GPVAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        90 G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +.++++||.|+|||+|++ |    |++||      |.|.+|.|++|+||++++.||-
T Consensus        27 ~~~~~~gD~V~v~Y~g~~-d----G~~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk   78 (113)
T 1hxv_A           27 DKKLANGDIAIIDFTGIV-D----NKKLASASAQNYELTIGSNSFIKGFETGLIAMK   78 (113)
T ss_dssp             --CCCSSEEEEEEEEEEE-T----TEECSTTCCSEEEEEETSSCSCTTHHHHHHTSC
T ss_pred             CCCCCCCCEEEEEEEEEE-C----CEEcccCCccCEEEEECCCChhHHHHHHHCCCC
Confidence            457899999999999998 5    78886      8899999999999999999993

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=98.83  E-value=3.2e-09  Score=81.93  Aligned_cols=45  Identities=16%  Similarity=0.032  Sum_probs=41.6

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++++||.|+|||+|++.|    |++||        |.|.+|.|++|+|||++|.||-
T Consensus        24 ~i~~gd~V~v~Y~g~l~d----G~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~   76 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLDD----GTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLK   76 (169)
T ss_dssp             SCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred             cCCCCCEEEEEEEEEECC----CCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCC
Confidence            588999999999999975    88998        8899999999999999999993

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=98.81  E-value=5.4e-09  Score=78.63  Aligned_cols=46  Identities=9%  Similarity=0.127  Sum_probs=41.5

Q ss_pred             CCCCCCCEEEEEEEEEEe-eccccceEEE-------EEEecCCCceecChHHHhcccc
Q 032426           91 PVAQKGSTVQVGLNFKVE-FQRYIIIVFT-------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        91 ~~p~~Gd~V~VhY~G~l~-~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+++.||.|++||+|++. +    |++||       |.|.+|.|++|+||++++.||-
T Consensus         5 ~~i~~gd~V~v~Y~g~~~~d----G~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~   58 (151)
T 2kr7_A            5 DLESIKQAALIEYEVREQGS----SIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQ   58 (151)
T ss_dssp             CCTTSCCEEEEEEEEEESSC----SCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCC
T ss_pred             cCCCCCCEEEEEEEEEECCC----CCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCC
Confidence            457899999999999986 5    88888       8899999999999999999983

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=98.67  E-value=1.8e-08  Score=77.61  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=40.2

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEEE-------EEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVFT-------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||.|+|||+|++.+    |++||       |.|.+|.|++|+||+++|.||-
T Consensus         3 i~~gd~V~v~Y~g~~~d----G~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~   53 (171)
T 2k8i_A            3 VAKDLVVSLAYQVRTED----GVLVDESPVSAPLDYLHGHGSLISGLETALEGHE   53 (171)
T ss_dssp             CCTTEEEEEEEEEEETT----SCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCC
T ss_pred             CCCCCEEEEEEEEEECC----CCEEeeccCCcCEEEEECCCCcchHHHHHHcCCC
Confidence            67999999999999864    88888       8899999999999999999993

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}

Probab=98.64  E-value=2.4e-08  Score=78.60  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=40.2

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEEE-------EEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVFT-------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~Fd-------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||.|+|||++++.+    |++||       |.|.+|.+++|+||+++|.||-
T Consensus         3 i~~gd~V~v~Y~g~~~d----G~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~   53 (196)
T 2kfw_A            3 VAKDLVVSLAYQVRTED----GVLVDESPVSAPLDYLHGHGSLISGLETALEGHE   53 (196)
T ss_dssp             CCSSCEEEEEEEEEETT----TEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSC
T ss_pred             CCCCCEEEEEEEEEECC----CCEEEecCCCCCEEEEECCCCcchHHHHHHcCCC
Confidence            68999999999999864    88998       7899999999999999999993

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=98.52  E-value=2e-07  Score=78.50  Aligned_cols=58  Identities=16%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             CCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---EEEecCCC---ceecChHHHhccc
Q 032426           77 SDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---FSVVLPRT---NVTRHLNCGVETQ  139 (141)
Q Consensus        77 psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---f~f~~g~G---~VIkGwDeGv~gm  139 (141)
                      ..++.+.++++|+|. .|+.|++|.|||+|++ +    |++||   |.|.+|.|   +||+|||+++..|
T Consensus       145 dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~----g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~  209 (457)
T 1kt0_A          145 DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-G----GRMFDCRDVAFTVGEGEDHDIPIGIDKALEKM  209 (457)
T ss_dssp             SSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-T----TEEEEEEEEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred             CcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-C----CeEEecCceEEEeCCCccccCChHHHHHHHhC
Confidence            458889999999985 6999999999999999 5    88998   88999977   4999999999987

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=98.47  E-value=5.4e-08  Score=74.04  Aligned_cols=45  Identities=13%  Similarity=0.089  Sum_probs=35.3

Q ss_pred             CCCCCEEEEEEEEEEeecc-cc------------------ceEEEEEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQR-YI------------------IIVFTFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~-~~------------------G~~Fdf~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||.|+|||+|++ |+. ++                  +.  .|.|.+|.|++|+|||+++.||-
T Consensus         2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~--P~~f~vG~g~vi~G~eeaL~gm~   65 (157)
T 3pr9_A            2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYG--PVAIFAGEGQVLPGLDEAILEMD   65 (157)
T ss_dssp             CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCS--CEEEETTSSSSCHHHHHHHHHCC
T ss_pred             CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCC--CEEEEECCCcHHHHHHHHHcCCC
Confidence            578999999999999 610 00                  00  06689999999999999999993

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=98.40  E-value=6.7e-08  Score=72.61  Aligned_cols=49  Identities=14%  Similarity=0.157  Sum_probs=36.9

Q ss_pred             CCCCCCEEEEEEEEEEeecc-ccce---------------EE-EEEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQR-YIII---------------VF-TFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~-~~G~---------------~F-df~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++++||.|++||+|++.++. ++.+               .. .|.|.+|.|++|+||++++.||-
T Consensus         1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~   66 (151)
T 1ix5_A            1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDME   66 (151)
T ss_dssp             CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCC
T ss_pred             CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCC
Confidence            36899999999999986421 0000               00 16788999999999999999993

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=98.34  E-value=1.8e-07  Score=75.37  Aligned_cols=45  Identities=13%  Similarity=0.089  Sum_probs=35.3

Q ss_pred             CCCCCEEEEEEEEEEeecc-cc------------------ceEEEEEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQR-YI------------------IIVFTFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~-~~------------------G~~Fdf~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||.|+|||+|++ |+. ++                  +.  .|.|.+|.|++|+|||+++.||-
T Consensus         2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~--P~~f~lG~g~vIpG~eeaL~Gm~   65 (231)
T 3prb_A            2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYG--PVAIFAGEGQVLPGLDEAILEMD   65 (231)
T ss_dssp             CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCS--CEEEETTSSSSCHHHHHHHHTCC
T ss_pred             CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCC--CEEEEeCCCcHHHHHHHHHcCCC
Confidence            578999999999999 610 00                  00  06789999999999999999993

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=98.29  E-value=5.3e-07  Score=68.42  Aligned_cols=46  Identities=11%  Similarity=0.049  Sum_probs=35.1

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEEEEEEecCCCceecChHHHhcccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVFTFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~Fdf~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||.|++||+|+ .|+...... .+.|.+|.|++|+||++++.||-
T Consensus         3 i~~gd~V~v~Y~g~-~dG~~fdss-~~~f~~G~g~vipG~e~aL~Gm~   48 (158)
T 3cgm_A            3 VGQDKVVTIRYTLQ-VEGEVLDQG-ELSYLHGHRNLIPGLEEALEGRE   48 (158)
T ss_dssp             CCTTEEEEEEEEEE-ETTEEEEEE-EEEEETTSSSSCHHHHHHHTTCB
T ss_pred             CCCCCEEEEEEEEE-ECCEEEEee-EEEEEECCCCcChHHHHHHcCCC
Confidence            67899999999999 640000000 07899999999999999999983

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=98.28  E-value=3.4e-07  Score=78.00  Aligned_cols=44  Identities=14%  Similarity=0.217  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhccc
Q 032426           91 PVAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        91 ~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ..++.||.|++||+|+. |    |..||      |.|.+|.|++|+||++++.||
T Consensus       159 ~~~~~gD~V~i~y~g~~-d----G~~fd~~~~~~~~~~lG~g~~ipgfee~L~Gm  208 (392)
T 1t11_A          159 EAAENGKRVSIDFVGSI-D----GVEFEGGKAENFPLEMGAGRMIPGFEDGIVGK  208 (392)
T ss_dssp             CCCCTTCEEEEEEEEES-S----SSCCTTCEEEEEEEETTSCCBSTTSGGGTTTC
T ss_pred             CCCCCCCEEEEEEEEEE-C----CEEccCCCccceEEEecCCCcchhHHHHhCCC
Confidence            35899999999999995 4    55554      999999999999999999998

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=98.21  E-value=6.5e-07  Score=77.07  Aligned_cols=45  Identities=11%  Similarity=0.146  Sum_probs=40.3

Q ss_pred             CCCCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhccc
Q 032426           90 GPVAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        90 G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      +..++.||.|.+||+|+. |    |..||      |.|.+|.|++|+||++++.||
T Consensus       155 ~~~~~~gD~V~i~y~g~~-d----G~~fd~~~~~~~~~~lG~g~~ipgfee~L~G~  205 (432)
T 1w26_A          155 DGAVEAEDRVTIDFTGSV-D----GEEFEGGKASDFVLAMGQGRMIPGFEDGIKGH  205 (432)
T ss_dssp             SSCCCTTCEEEECEEEES-S----SCBCSSCCCSSEEEETTSCCSCTTHHHHSSSC
T ss_pred             CCCCCCCCEEEEEEEEee-C----CeEccCCCccceEEEeCCCCcchHHHHHhCCC
Confidence            456899999999999995 4    77776      999999999999999999998

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=93.72  E-value=0.057  Score=46.26  Aligned_cols=41  Identities=10%  Similarity=-0.027  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++.||.|++||+|+. |    |..|+      |.+.+|.|+  + |++++.||=
T Consensus       154 ~a~~gD~V~id~~~~~-d----G~~~~~~~~~~~~l~~g~~~--~-fe~~liG~k  200 (433)
T 3gty_X          154 PAEAGDLVRVNMEVYN-E----EGKKLTSREYEYVISEDEDR--P-FVKDLVGKK  200 (433)
T ss_dssp             CCCTTSEEEEEEEEEC-T----TSCEEEEEEEEEECCSSCCC--T-THHHHTTCC
T ss_pred             ccCCCCEEEEEEEEEE-C----CEECcCCCCCCeEEEecCCc--h-HHHHhCCCC
Confidence            4789999999999984 3    66665      777888887  4 999999983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	141
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	4e-05

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.7 bits (89), Expect = 4e-05
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 72  DYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEF 109
           ++  +  GL + D V G GP A KG  ++     K+E 
Sbjct: 2   EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	141
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.71
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.68
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.66
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.6
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.57
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.57
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.57
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.56
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.52
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.4
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.28
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	98.64
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	98.28
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	97.77
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	97.71

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=7.9e-18  Score=120.72  Aligned_cols=64  Identities=25%  Similarity=0.351  Sum_probs=60.0

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcc
Q 032426           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVET  138 (141)
Q Consensus        71 ~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~g  138 (141)
                      .|+.++||||+|+++++|+|++|+.||+|.|||+|++.|    |++||        +.|.+|.+++|+|||+++.|
T Consensus         1 ~~~~~~psGl~y~~~~~G~G~~p~~gd~V~v~y~g~l~~----G~~fdss~~~~~p~~~~~g~~~~i~g~~~~i~g   72 (125)
T d1u79a_           1 CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN----GKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILG   72 (125)
T ss_dssp             CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT----SCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHC
T ss_pred             CCcEECCCCCEEEEEEeccCCCCCCCCEEEEEEEeeecC----CcEEecccccCcceeEecCccccccchhhhccc
Confidence            378999999999999999999999999999999999985    89998        89999999999999999865

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.8e-17  Score=127.79  Aligned_cols=65  Identities=25%  Similarity=0.234  Sum_probs=59.9

Q ss_pred             CCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           69 PLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        69 ~~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ...++.++||||+|+++++|+|+.|+.||+|.|||+|+|.|    |++||        |.|.+  |+||+||++||.+|
T Consensus        98 ~~~~v~~~~sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~d----G~~fd~s~~~~~p~~~~~--~~vi~g~~e~l~~m  170 (210)
T d1q6ha_          98 KEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID----GKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNI  170 (210)
T ss_dssp             HSTTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT----SCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGS
T ss_pred             ccCceEEccCceEEEEeeCCCCCCCCCCceEEEEEEEEEcC----CCEEeecccCCCcceecc--CccchhHHHHHhhc
Confidence            34678999999999999999999999999999999999996    89998        77776  68999999999999

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.66  E-value=5.9e-17  Score=125.29  Aligned_cols=64  Identities=20%  Similarity=0.149  Sum_probs=58.7

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        70 ~~~~~t~psGL~y~dl~~G~G~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      ..+++++||||+|.++++|+|+.|+.||+|.|||+|+|.|    |++||        |.|.  .|+||+||++||.+|
T Consensus        90 ~~~v~~~~sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~d----g~~f~~s~~~~~p~~~~--~~~~i~G~~e~l~~m  161 (204)
T d1fd9a_          90 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID----GTVFDSTEKTGKPATFQ--VSQVIPGWTEALQLM  161 (204)
T ss_dssp             STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHCSCEEEE--GGGSCHHHHHHHTTC
T ss_pred             CCceEEecCccEEEEeecCCCcccCCCCEEEEEEEEEECC----CCEecccccCCCCceec--CCccchhHHHHhcCC
Confidence            4578899999999999999999999999999999999996    89998        6665  478999999999999

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=7e-16  Score=108.95  Aligned_cols=63  Identities=17%  Similarity=0.229  Sum_probs=57.9

Q ss_pred             eeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           74 HTTSDGLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        74 ~t~psGL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++++||+|+++++|+|.+ |+.||+|+|||+|++.|    |++||        |.|.++.+++|+||++||.+|=
T Consensus         2 ~~~d~gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~d----G~~~ds~~~~~~~~~~~~~~~~~i~G~~~~l~~M~   73 (113)
T d1yata_           2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN----GQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLS   73 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT----SCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCC
T ss_pred             cCccCCcEEEEEECccCCcCCCCCCEEEEEEEEEEec----CcEEeccccCCceEeeeeccCceeeehhhhccccc
Confidence            3578999999999999986 99999999999999986    88887        8899999999999999999993

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.8e-15  Score=106.00  Aligned_cols=58  Identities=26%  Similarity=0.315  Sum_probs=54.4

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           79 GLKYYDIVEGKGPV-AQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        79 GL~y~dl~~G~G~~-p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ||+|+++++|+|++ |+.||+|.+||+|++.|    |++||        +.|.+|.+++|+||++|+.+|=
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~d----G~~~d~s~~~~~p~~~~~g~~~~i~G~~~~l~~M~   67 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED----GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMS   67 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCC
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEecC----CeEEEeeeccceeeeEeeCcchhheeehhhhcCcc
Confidence            89999999999985 89999999999999986    88998        8899999999999999999993

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.57  E-value=9.6e-16  Score=114.94  Aligned_cols=69  Identities=14%  Similarity=0.143  Sum_probs=60.3

Q ss_pred             CCCCCceeCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           68 IPLEDYHTTSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        68 ~~~~~~~t~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ....++.++||||+|+++++|+|. .|+.||+|.|||+|++.|    |++||      +.|.++.+++|+||+++|.+|=
T Consensus        24 ~~~~~~~~~~sGl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~d----G~~fds~~~~~~p~~~~~~~~i~G~~e~l~~M~   99 (160)
T d1jvwa_          24 AAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD----GTVFDSSRERGKPTTFRPNEVIKGWTEALQLMR   99 (160)
T ss_dssp             HHSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT----SCEEEEHHHHTSCEEECGGGSCHHHHHHHTTCC
T ss_pred             ccCCCCEECCCCCEEEEEECcccccCCCCCcceEEEEEEEEcc----CCeeeeeccccCccccCccccchhHHHHhcCcc
Confidence            345678899999999999999997 489999999999999986    89998      3355677999999999999993

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.57  E-value=2.5e-15  Score=107.37  Aligned_cols=60  Identities=32%  Similarity=0.322  Sum_probs=55.8

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm  139 (141)
                      .++||+|+++++|+|. .|+.||+|+|||+|++.|    |++||        +.|.+|.++||+||++|+.+|
T Consensus         8 ~d~Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~d----G~v~dss~~~~~p~~f~~g~~~vi~G~~~~l~~M   76 (118)
T d1r9ha_           8 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN----GTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATM   76 (118)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT----SCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTC
T ss_pred             CCCCEEEEEEECcCCCCCCCCCCEEEEEEEEEEcC----CCEEEEccccceeeeeeccCcceeeeeeeeeeee
Confidence            4589999999999996 599999999999999986    88997        889999999999999999999

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.5e-15  Score=107.00  Aligned_cols=60  Identities=22%  Similarity=0.168  Sum_probs=55.7

Q ss_pred             CCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           77 SDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        77 psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++||+|+++++|+|. .|..||+|+|||+|++.|    |++||        |.|.+|.+++|+||++|+.+|=
T Consensus        10 d~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~d----G~~fdss~~~~~p~~f~~g~~~~i~G~~~~l~~M~   78 (120)
T d1q1ca1          10 DEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD----GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMK   78 (120)
T ss_dssp             SSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT----SCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCC
T ss_pred             CCCEEEEEEEcccCCcCCCCCCEEEEEEEEEEcC----CCEEEeccccccceeeecCCCceeeeeeeeecccc
Confidence            489999999999996 499999999999999986    88998        8899999999999999999993

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.52  E-value=1.6e-15  Score=107.10  Aligned_cols=61  Identities=23%  Similarity=0.211  Sum_probs=48.0

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE--------EEEecCCCceecChHHHhcccc
Q 032426           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT--------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        76 ~psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd--------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      +++||+|+++++|+|. .|+.||+|.|||+|++.|    |++||        |.|.+|.|++|+||+++|.+|=
T Consensus         2 ~d~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~d----G~~~dss~~~~~p~~f~lg~~~~i~G~~~~l~~M~   71 (111)
T d1kt1a2           2 KDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLAN----GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMK   71 (111)
T ss_dssp             CSCSCEEEC----CCSCCCCTTCEEEEECCCCSCC----------------CEEEETTSSSSCHHHHHSTTTCC
T ss_pred             CCCCeEEEEEEcccCCcCCCCCCEEEEEEEEEECC----CCEEEEEEecceeeeeecCCCcEEeeeeeeehhcc
Confidence            5689999999999996 599999999999999986    78886        8899999999999999999993

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.2e-14  Score=101.47  Aligned_cols=58  Identities=17%  Similarity=0.102  Sum_probs=52.6

Q ss_pred             CcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---------------EEEecCCCceecChHHHhcccc
Q 032426           79 GLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---------------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        79 GL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---------------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .+.+.++++|+|. .|+.||+|+|||+|++.|    |++||               |.|.+|.+++|+||++||.+|-
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~d----G~~fdss~~~~~~~~~~~~p~~f~lg~~~~i~Gl~~~v~~M~   75 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQD----GTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMS   75 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECTT----SCEEEECCCSSCCTTTSSCCEEEETTTTSSCHHHHHHHTTCC
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEECC----CCEeecccccccccccCCCceeeeecccccccchheechhhc
Confidence            4678999999996 599999999999999986    88887               7889999999999999999994

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.40  E-value=3e-13  Score=94.66  Aligned_cols=61  Identities=16%  Similarity=0.232  Sum_probs=52.4

Q ss_pred             eCCCCcEEEEeecCCC-CCCCCCCEEEEEEEEEEeeccccceEEE---EEEecCCC---ceecChHHHhcccc
Q 032426           75 TTSDGLKYYDIVEGKG-PVAQKGSTVQVGLNFKVEFQRYIIIVFT---FSVVLPRT---NVTRHLNCGVETQI  140 (141)
Q Consensus        75 t~psGL~y~dl~~G~G-~~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---f~f~~g~G---~VIkGwDeGv~gm~  140 (141)
                      +.++||.|+++++|+| +.|+.||+|+|||+|++.     |++|+   +.|.++.+   +||+||+++|.+|=
T Consensus         5 ~~D~gi~k~il~~G~G~~~p~~gd~V~v~y~g~~~-----g~~~~~~~~~~~~~~~~~~~vi~G~~~~l~~M~   72 (115)
T d1kt1a3           5 LEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRCG-----GRVFDCRDVAFTVGEGEDHDIPIGIDKALEKMQ   72 (115)
T ss_dssp             TSSSSEEEEEEECCCCSSCCCTTCEEEEEEEEEET-----TEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred             ccCCCEEEEEEEeecCCCCCCCCCEEEEEEEEEeC-----CccccccccCceeeeccccccCchhHhhhccch
Confidence            4578999999999999 579999999999999975     67776   66766654   69999999999993

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=4.4e-12  Score=89.00  Aligned_cols=58  Identities=16%  Similarity=0.203  Sum_probs=48.9

Q ss_pred             CCCcEEEEeecCCCC-CCCCCCEEEEEEEEEEeeccccceEEE---EEEecCCC---ceecChHHHhccc
Q 032426           77 SDGLKYYDIVEGKGP-VAQKGSTVQVGLNFKVEFQRYIIIVFT---FSVVLPRT---NVTRHLNCGVETQ  139 (141)
Q Consensus        77 psGL~y~dl~~G~G~-~p~~Gd~V~VhY~G~l~~~~~~G~~Fd---f~f~~g~G---~VIkGwDeGv~gm  139 (141)
                      .+||.|+++++|+|. .|+.||.|.|||+|++.+     .+|+   +.+..+.+   ++|+||+++|.+|
T Consensus         7 D~gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~~-----~~~~~~~~~~~~~~~~~~~~i~Gl~~~l~~M   71 (117)
T d1q1ca2           7 DGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD-----KLFDQRELRFEIGEGENLDLPYGLERAIQRM   71 (117)
T ss_dssp             SSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETT-----EEEEEEEEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred             CCCEEEEEEeeecCCCCCCCCCEEEEEEEEEeCC-----CcEeeccccceeeecceeeeCcHHHHhhhcc
Confidence            489999999999995 799999999999999984     3455   55555543   6999999999999

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=98.64  E-value=9.6e-09  Score=68.61  Aligned_cols=44  Identities=7%  Similarity=0.144  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEEEEEEEeeccccceEEE------EEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYIIIVFT------FSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~G~~Fd------f~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ++..||.|+|+|+|++.     |+.|+      |.+.+|.+++|+||++++.||-
T Consensus         1 k~a~GD~V~idy~g~~d-----G~~~~~~~~~~~~~~lg~~~~ipgf~~~l~g~~   50 (85)
T d1hxva_           1 KLANGDIAIIDFTGIVD-----NKKLASASAQNYELTIGSNSFIKGFETGLIAMK   50 (85)
T ss_dssp             CCCSSEEEEEEEEEEET-----TEECSTTCCSEEEEEETSSCSCTTHHHHHHTSC
T ss_pred             CCCCCCEEEEEEEEEEC-----CEEcccccccCCCEEECCcccCchHHHHhccCc
Confidence            36689999999999974     66665      8889999999999999999993

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=98.28  E-value=6.9e-08  Score=70.82  Aligned_cols=47  Identities=15%  Similarity=0.125  Sum_probs=36.2

Q ss_pred             CCCCCEEEEEEEEEEeeccccceEE-----------------EEEEecCCCceecChHHHhccc
Q 032426           93 AQKGSTVQVGLNFKVEFQRYIIIVF-----------------TFSVVLPRTNVTRHLNCGVETQ  139 (141)
Q Consensus        93 p~~Gd~V~VhY~G~l~~~~~~G~~F-----------------df~f~~g~G~VIkGwDeGv~gm  139 (141)
                      +++|+.|.+||+|++.|+....+++                 .|.|.+|.|++|+||++++.||
T Consensus         2 v~~G~~V~v~Y~~~~~~G~~fdsT~e~~~~~~~~~~~~~~~~P~~f~~G~g~~ipglE~al~gm   65 (151)
T d1ix5a_           2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDM   65 (151)
T ss_dssp             CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTC
T ss_pred             ccCCCEEEEEEEEEECCCCEEEeCchHhcccccccccccCCCCEEEEecCCCccHHHHHHHHhh
Confidence            5789999999999998510000000                 0789999999999999999999

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=97.77  E-value=6.9e-06  Score=56.97  Aligned_cols=49  Identities=10%  Similarity=0.125  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEEEEEEEeecccc-ceEEEEEEecCCCceecChHHHhcccc
Q 032426           92 VAQKGSTVQVGLNFKVEFQRYI-IIVFTFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        92 ~p~~Gd~V~VhY~G~l~~~~~~-G~~Fdf~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      .++.||.|+|+|+|++.+.... +..-+|.+.+|.++.|+|+++++.||-
T Consensus        23 ~a~~gD~v~id~~~~~dG~~~~~~~~~~~~~~lg~~~~~~~f~~~L~G~k   72 (113)
T d1t11a3          23 AAENGKRVSIDFVGSIDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKT   72 (113)
T ss_dssp             CCCTTCEEEEEEEEESSSSCCTTCEEEEEEEETTSCCBSTTSGGGTTTCC
T ss_pred             cccCCCEEEEEEEEEECCEEccCCccceEEEEeccccccccHHHhhcCCc
Confidence            3789999999999997521111 222248899999999999999999984

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=5.9e-06  Score=56.97  Aligned_cols=50  Identities=8%  Similarity=0.113  Sum_probs=37.9

Q ss_pred             CCCCCCCEEEEEEEEEEeecccc-ceEEEEEEecCCCceecChHHHhcccc
Q 032426           91 PVAQKGSTVQVGLNFKVEFQRYI-IIVFTFSVVLPRTNVTRHLNCGVETQI  140 (141)
Q Consensus        91 ~~p~~Gd~V~VhY~G~l~~~~~~-G~~Fdf~f~~g~G~VIkGwDeGv~gm~  140 (141)
                      ..++.||.|.|+|+|+....... +..-+|.+.+|.+.+|+||++++.||-
T Consensus        13 r~a~~GD~v~id~~~~~dG~~~~~~~~~~~~~~lg~~~~~~gf~~~L~G~k   63 (106)
T d1l1pa_          13 GAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHK   63 (106)
T ss_dssp             SSCCTTEEEEEEEECCSSSSCCSTTEEEEEEEEETTSCCCTTHHHHTTSCC
T ss_pred             ccccCCCEEEEEEEEEECCEECCCCcccceEEEecCCCccchHHHHhcCCC
Confidence            34678999999999986311111 122248899999999999999999984