Citrus Sinensis ID: 032621

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADHRSDL
Secondary Structure (PSIPRED)
cccccccccccccEEcHHHHHHHHHcccEEEEcccHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHccccccEEcHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHcccccccHHHHHHHHHcccEEEEcccHHHHHHccccccEEEEEcEEccccccccccHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHcccccEEccHHHHHHHHHcccccccccccHHHHccc
Coil and Loop (DISEMBL)
mdstgkssgaevITVDVRAAKNLLEsgygyldvrtaeefKEGHVDAakifnipymfntpegrvknpdFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGfkhvsnfgggHMAWVQNGlkvkarekpadhrsdl
Flexible Loop (DISEMBL)
mdstgkssgaeviTVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMfntpegrvknPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGlkvkarekpadhrsdl
Low Complexity Region (SEG)
MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADHRSDL
Disordered region (IsUnstruct)
***********VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH*******************************
Disordered Region (DISOPRED)
**************VDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK*****KKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG****************
Disordered Region (DISEMBL)
*********AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK************
Disordered Region (DISPRO)
***********VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADHRSDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	137	2.2.26 [Sep-21-2011]
Q9FKW8	136	Thiosulfate sulfurtransfe	yes	no	0.919	0.926	0.547	7e-38
F4IPI4	156	Rhodanese-like domain-con	no	no	0.927	0.814	0.535	9e-37
Q8RUD6	169	Rhodanese-like domain-con	no	no	0.927	0.751	0.5	2e-30
Q39129	120	Thiosulfate sulfurtransfe	no	no	0.810	0.925	0.513	8e-26
Q38853	182	Rhodanese-like domain-con	no	no	0.802	0.604	0.446	2e-25
P27626	183	Senescence-associated pro	N/A	no	0.802	0.601	0.446	5e-25
O48529	234	Rhodanese-like domain-con	no	no	0.744	0.435	0.284	2e-06
Q94A65	224	Rhodanese-like domain-con	no	no	0.854	0.522	0.278	3e-06
Q10215	142	Putative thiosulfate sulf	yes	no	0.576	0.556	0.297	7e-06
Q7D5X9	392	Probable adenylyltransfer	yes	no	0.678	0.237	0.315	9e-05

>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1

 Score =  155 bits (392), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 69/126 (54%), Positives = 92/126 (73%)

Query: 4   TGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
           +  +   EV++VDV  AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRV
Sbjct: 6   SSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV 65

Query: 64  KNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK 123
           KN +FL++V SL    D ++VGCQSGARSL AT +L+ AG+K V N GGG++AWV +   
Sbjct: 66  KNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFP 125

Query: 124 VKAREK 129
           +   E+
Sbjct: 126 INTEEE 131

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is thiosulfate > 3-mercaptopyruvate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 1

>sp|F4IPI4|STR17_ARATH Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana GN=STR17 PE=2 SV=1

 Score =  151 bits (382), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 89/127 (70%)

Query: 3   STGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR 62
           +T   S  +VIT+DV  A+ LL+SGY +LDVRT EEFK+GHVD+  +FN+PY   TP+G+
Sbjct: 23  TTTSMSEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQ 82

Query: 63  VKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
             NP+FLK V SLC + D L++GC+SG RSLHAT  L+ +GFK V N  GG++AWV    
Sbjct: 83  EINPNFLKHVSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRF 142

Query: 123 KVKAREK 129
            VK   K
Sbjct: 143 PVKVEHK 149

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 85/132 (64%), Gaps = 5/132 (3%)

Query: 1   MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE 60
           M+ T   +  +V TVDV  AK  L +G+ YLDVRT EEF + HV+ A   NIPYMF T E
Sbjct: 30  MEETKPKTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEA--LNIPYMFKTDE 87

Query: 61  GRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
           GRV NPDFL +V S+CK+++ L+V C +G R   A  DLL  G+ HV+N GGG+ AWV  
Sbjct: 88  GRVINPDFLSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDA 147

Query: 121 GLKVKAREKPAD 132
           G    A +KP +
Sbjct: 148 GF---AGDKPPE 156

Arabidopsis thaliana (taxid: 3702)

>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2

 Score =  115 bits (288), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 73/113 (64%), Gaps = 2/113 (1%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V V  A +LL +G+ YLDVRT EEF +GH  A    N+PYM     G  KNPDFL++V 
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGH--ACGAINVPYMNRGASGMSKNPDFLEQVS 67

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
           S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct: 68  SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 120

Thought to act during the early stages of leaf senescence. Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is thiosulfate > 3-mercaptopyruvate.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|Q38853|STR15_ARATH Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 2/112 (1%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V VR A+ L ++GY YLDVRT +EF  GH    +  N+PYM+    G VKNP FL++V 
Sbjct: 72  SVPVRVARELAQAGYRYLDVRTPDEFSIGH--PTRAINVPYMYRVGSGMVKNPSFLRQVS 129

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125
           S  ++ D +++GC+SG  S  A+ DLL AGF  +++  GG++AW +N L V+
Sbjct: 130 SHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPVE 181

Arabidopsis thaliana (taxid: 3702)

>sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 2/112 (1%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V VR A+ L ++GY +LDVRT +EF  GH   ++  N+PYM+    G VKNP FL++V 
Sbjct: 73  SVPVRVARELAQAGYKHLDVRTPDEFSIGH--PSRAINVPYMYRVGSGMVKNPSFLRQVS 130

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125
           S  ++ D +++GC+SG RSL A+ +LL AGF  V++  GG++ W +N L V+
Sbjct: 131 SHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVE 182

Is thought to act during the early stages of leaf senescence.

Raphanus sativus (taxid: 3726)

>sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 9   GAEVITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHVDAAKIFNIPYM------------ 55
            AE+  V+   AK L+ E GY  +DVR   +F+  H+ +    +IP              
Sbjct: 46  AAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCS--HIPLFIYNEDNDIGTII 103

Query: 56  ------------FNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAG 103
                       F  P  +V NP+FLK VR+   ++ +L++ CQ G RS  A + L  AG
Sbjct: 104 KRTVHNNFSGLFFGLPFTKV-NPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRLEEAG 162

Query: 104 FKHVSNFGGG 113
           +++++    G
Sbjct: 163 YENIACVTSG 172

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 34/151 (22%)

Query: 12  VITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGH------------------VDAAKIFNI 52
           V +VDV+ A+ L  E+ +  LDVR   E+K GH                   D A+    
Sbjct: 74  VRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTAWDIARRLGF 133

Query: 53  PYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG--------------ARSLHATAD 98
            + F    G  +NP+F++ V +   +E +++V C S               +RSL A   
Sbjct: 134 AF-FGIFSGTEENPEFIQSVEAKLDKEAKIIVACSSAGTMKPTQNLPEGQQSRSLIAAYL 192

Query: 99  LLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129
           L+  G+K+V +  GG   W + GL V+  E+
Sbjct: 193 LVLNGYKNVFHLEGGIYTWGKEGLPVETIEE 223

Arabidopsis thaliana (taxid: 3702)

>sp|Q10215|RDL_SCHPO Putative thiosulfate sulfurtransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.07c PE=3 SV=2

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 15/94 (15%)

Query: 31  LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-----NPDFLKKVRSLCKE--EDRLV 83
           +DVR  +EFK+G ++ +        +N P G+++     + +   K     K   ED +V
Sbjct: 50  IDVREPDEFKQGAIETS--------YNLPVGKIEEAMKLSDEEFSKTYGFSKPVFEDNVV 101

Query: 84  VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
           V C+SG RS  A+  L   G+K++ N+ G  + W
Sbjct: 102 VYCRSGRRSTTASDILTKLGYKNIGNYTGSWLEW 135

Thiosulfate sulfurtransferase which catalyzes the transfer of sulfane sulfur from thiosulfate to cyanide.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|Q7D5X9|MOEZ_MYCTU Probable adenylyltransferase/sulfurtransferase MoeZ OS=Mycobacterium tuberculosis GN=moeZ PE=1 SV=1

 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 18/111 (16%)

Query: 14  TVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIP-YMFNTPEGRVKNPDFLK 70
           T+  R  ++ L+SG     +DVR   E+   H+D A++  IP  + N+ EG  K P    
Sbjct: 288 TITPRELRDWLDSGRKLALIDVRDPVEWDIVHIDGAQL--IPKSLINSGEGLAKLP---- 341

Query: 71  KVRSLCKEEDRL-VVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
                   +DR  V+ C++G RS  A A +  AGF    +  GG +AW + 
Sbjct: 342 --------QDRTAVLYCKTGVRSAEALAAVKKAGFSDAVHLQGGIVAWAKQ 384

Catalyzes the conversion of the sulfur carrier protein CysO to CysO-thiocarboxylate. The reaction is thought to proceed in two steps: first, ATP-dependent activation of CysO as acyl-adenylate (CysO-COOAMP), followed by sulfur transfer to give CysO-thiocarboxylate (CysO-COSH) (Probable). The sulfur source is unknown.

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
224133664	134	predicted protein [Populus trichocarpa]	0.970	0.992	0.684	1e-48
356559276	157	PREDICTED: senescence-associated protein	0.919	0.802	0.677	3e-44
351722436	158	uncharacterized protein LOC100305809 [Gl	0.919	0.797	0.653	5e-42
225431104	129	PREDICTED: thiosulfate sulfurtransferase	0.875	0.930	0.647	3e-41
357518001	131	Thiosulfate sulfurtransferase [Medicago	0.912	0.954	0.634	2e-40
388515829	152	unknown [Lotus japonicus]	0.919	0.828	0.637	3e-40
356496631	149	PREDICTED: thiosulfate sulfurtransferase	0.861	0.791	0.635	7e-40
255577542	577	zinc finger protein, putative [Ricinus c	0.824	0.195	0.707	3e-39
357483815	145	Thiosulfate sulfurtransferase [Medicago	0.861	0.813	0.644	6e-39
358248854	149	uncharacterized protein LOC100803436 pre	0.883	0.812	0.628	2e-38

>gi|224133664|ref|XP_002327650.1| predicted protein [Populus trichocarpa] gi|222836735|gb|EEE75128.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 108/133 (81%)

Query: 1   MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE 60
           M S  KS+GAEV+TVDV+A K LLESGY YLDVRT EE+ +GHVD  KIFNIPY+FNTPE
Sbjct: 1   MGSLDKSTGAEVVTVDVKATKGLLESGYTYLDVRTVEEYNKGHVDGEKIFNIPYLFNTPE 60

Query: 61  GRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
           GRVKNP+FLK+V  +CKEED+L+VGCQSG RSL+ATADLL AGFK VSN GGG++AW +N
Sbjct: 61  GRVKNPNFLKEVSGVCKEEDKLLVGCQSGVRSLYATADLLSAGFKDVSNVGGGYLAWTEN 120

Query: 121 GLKVKAREKPADH 133
              VK  ++  D 
Sbjct: 121 VFPVKIEKRERDE 133

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559276|ref|XP_003547926.1| PREDICTED: senescence-associated protein DIN1-like [Glycine max]

 Score =  182 bits (463), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 103/127 (81%), Gaps = 1/127 (0%)

Query: 1   MDSTG-KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP 59
           M S G +SSG EV+TVDV A K+L+++ + YLDVRT EEF++GHVDA KI NIPYMFNTP
Sbjct: 1   MGSIGIESSGPEVVTVDVHATKDLIQTSHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTP 60

Query: 60  EGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           EGRVKNP+FLK+V S CK+ED ++VGCQSG RSL+ATADLL  GFK VSN GGG+M WV+
Sbjct: 61  EGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYMDWVK 120

Query: 120 NGLKVKA 126
               VKA
Sbjct: 121 KEFPVKA 127

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722436|ref|NP_001236988.1| uncharacterized protein LOC100305809 [Glycine max] gi|255626667|gb|ACU13678.1| unknown [Glycine max]

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 102/127 (80%), Gaps = 1/127 (0%)

Query: 1   MDSTG-KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP 59
           M S G +SSG EV+TVDV A K+L+++ + YLDVRT EEF++GHVDA KI N+ YMFNTP
Sbjct: 1   MGSIGIESSGPEVVTVDVHATKDLIQTSHVYLDVRTVEEFQKGHVDAEKIINVAYMFNTP 60

Query: 60  EGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           EGRVKNP+FLK+V   CK+ D ++VGCQSG RSL+ATADLL  GFK VSN GGG++ WV+
Sbjct: 61  EGRVKNPEFLKEVSYACKKGDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYLDWVK 120

Query: 120 NGLKVKA 126
           N L VKA
Sbjct: 121 NELPVKA 127

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431104|ref|XP_002265009.1| PREDICTED: thiosulfate sulfurtransferase, chloroplastic [Vitis vinifera] gi|297734996|emb|CBI17358.3| unnamed protein product [Vitis vinifera]

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 97/122 (79%), Gaps = 2/122 (1%)

Query: 1   MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE 60
           MDS  +SS  EV+T+DV AAK+L+ SGY YLDVRT EEFK+GH D   I NIPY+F TPE
Sbjct: 1   MDS--QSSATEVVTIDVHAAKDLINSGYRYLDVRTVEEFKKGHADVENILNIPYLFTTPE 58

Query: 61  GRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
           GRVKNP+FL++V+  C +ED L+VGCQSG RSL AT+ L+ AGFK V + GGG++AWVQN
Sbjct: 59  GRVKNPEFLEQVQFACSKEDHLIVGCQSGVRSLAATSVLVSAGFKDVKDIGGGYLAWVQN 118

Query: 121 GL 122
           GL
Sbjct: 119 GL 120

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518001|ref|XP_003629289.1| Thiosulfate sulfurtransferase [Medicago truncatula] gi|355523311|gb|AET03765.1| Thiosulfate sulfurtransferase [Medicago truncatula]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 1   MDSTG-KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP 59
           M S G +SS  EV+TVDV A K+L+++ + YLDVRT EEF++GHVD+ KI NI YMFNTP
Sbjct: 1   MGSIGIESSKTEVVTVDVLATKSLIKTTHVYLDVRTVEEFQKGHVDSEKIINIAYMFNTP 60

Query: 60  EGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           EGRVKNP+FLK+V SLC +ED L+VGCQSG RS++ATADLL  GFK V N GGG++ WV+
Sbjct: 61  EGRVKNPEFLKEVSSLCNKEDHLIVGCQSGVRSVYATADLLAEGFKDVYNMGGGYLEWVK 120

Query: 120 NGLKVK 125
               VK
Sbjct: 121 KEFPVK 126

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515829|gb|AFK45976.1| unknown [Lotus japonicus]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 1/127 (0%)

Query: 1   MDSTG-KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP 59
           M S G +SS  EV+TVDV AAK L+++ + YLDVRT EEF++GHVD  KI NIPYMFNTP
Sbjct: 1   MGSLGIESSKPEVVTVDVVAAKGLIQTTHVYLDVRTVEEFEKGHVDTVKIINIPYMFNTP 60

Query: 60  EGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           EGRVKN +F K++ S CK+ED ++VGCQSG RSL+ATADLL  GFK VSN GGG++ W++
Sbjct: 61  EGRVKNQEFRKELLSACKKEDHVIVGCQSGVRSLYATADLLAEGFKDVSNMGGGYVDWLK 120

Query: 120 NGLKVKA 126
           N   VKA
Sbjct: 121 NEFPVKA 127

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496631|ref|XP_003517169.1| PREDICTED: thiosulfate sulfurtransferase, chloroplastic-like [Glycine max]

 Score =  168 bits (425), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 95/118 (80%)

Query: 7   SSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP 66
           SSGA+V+ +DV AAK L+++G  YLDVRT EEFK+GHVDA  + NIPYM NTP+G+VKNP
Sbjct: 23  SSGAKVVAIDVHAAKRLIQTGSIYLDVRTVEEFKKGHVDAVNVLNIPYMLNTPKGKVKNP 82

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124
           DFLK+V S C +ED L++GCQSG RSL+ATADLL  GFK+V + GGG++ WV+N   V
Sbjct: 83  DFLKEVSSACNKEDHLILGCQSGVRSLYATADLLSEGFKNVKDMGGGYVDWVKNKFPV 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577542|ref|XP_002529649.1| zinc finger protein, putative [Ricinus communis] gi|223530875|gb|EEF32736.1| zinc finger protein, putative [Ricinus communis]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/113 (70%), Positives = 92/113 (81%)

Query: 4   TGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
           TG  SGAEV+TVDV+AAK LLES Y YLDVRT EEFK+GHV A KI NIPYMFNTPEGRV
Sbjct: 462 TGPRSGAEVVTVDVKAAKGLLESDYVYLDVRTVEEFKKGHVHAEKILNIPYMFNTPEGRV 521

Query: 64  KNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 116
           KNP FL++V ++CKEED LVVGCQSG RSL+ATAD+LGA    ++ FG   +A
Sbjct: 522 KNPKFLQEVSAVCKEEDHLVVGCQSGVRSLYATADMLGASTVVLNTFGKNQLA 574

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483815|ref|XP_003612194.1| Thiosulfate sulfurtransferase [Medicago truncatula] gi|355513529|gb|AES95152.1| Thiosulfate sulfurtransferase [Medicago truncatula] gi|388513883|gb|AFK45003.1| unknown [Medicago truncatula]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 76/118 (64%), Positives = 96/118 (81%)

Query: 7   SSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP 66
           SSGA+V+T+DV AAKNL+++G+ YLDVRT EEF++GHVDA KI NIPY+ +TP+GRVKN 
Sbjct: 25  SSGAKVVTIDVHAAKNLIQTGHIYLDVRTVEEFEKGHVDATKIINIPYLLDTPKGRVKNL 84

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124
           +F+K+V S C +ED LVVGCQSG RS  AT++LL  GFK+V N GGG+M WV N L V
Sbjct: 85  NFVKQVSSSCDKEDCLVVGCQSGKRSFSATSELLADGFKNVHNMGGGYMEWVSNKLPV 142

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248854|ref|NP_001240207.1| uncharacterized protein LOC100803436 precursor [Glycine max] gi|255638114|gb|ACU19371.1| unknown [Glycine max]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/121 (62%), Positives = 95/121 (78%)

Query: 8   SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD 67
           SGA+V+T+DVRAAK+L+++G  YLDVRT EEFK+GHV A  + NIPYM NTP+G+VKN D
Sbjct: 24  SGAKVVTIDVRAAKSLIQTGSIYLDVRTVEEFKKGHVYADNVLNIPYMLNTPKGKVKNGD 83

Query: 68  FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 127
           FLK+V S C +ED LVVGCQSG RSL+ATADLL  GFK+  + GGG++ WV+N   V   
Sbjct: 84  FLKEVSSACNKEDHLVVGCQSGVRSLYATADLLSDGFKNAKDMGGGYVDWVKNKFPVNIP 143

Query: 128 E 128
           E
Sbjct: 144 E 144

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
TAIR|locus:2827795	156	AT2G17850 "AT2G17850" [Arabido	0.927	0.814	0.535	9.5e-34
TAIR|locus:2156882	138	STR18 "AT5G66170" [Arabidopsis	0.919	0.913	0.539	2e-33
TAIR|locus:505006261	169	AT2G21045 [Arabidopsis thalian	0.927	0.751	0.5	1e-29
UNIPROTKB|B2C7Y6	185	NRIP1 "Chloroplast N receptor-	0.781	0.578	0.504	5.9e-25
TAIR|locus:2156937	120	STR16 "AT5G66040" [Arabidopsis	0.810	0.925	0.513	7.6e-25
TAIR|locus:2128038	182	SEN1 "AT4G35770" [Arabidopsis	0.802	0.604	0.455	8.7e-24
TAIR|locus:2059999	234	AT2G42220 "AT2G42220" [Arabido	0.379	0.222	0.377	4.3e-08
UNIPROTKB|F1S179	131	TSTD1 "Uncharacterized protein	0.751	0.786	0.345	8.7e-08
UNIPROTKB|Q607E4	120	MCA1816 "Sulfurtransferase" [M	0.627	0.716	0.371	1.4e-07
POMBASE|SPAC4H3.07c	142	SPAC4H3.07c "protein phosphata	0.664	0.640	0.303	2.9e-07

TAIR|locus:2827795 AT2G17850 "AT2G17850" [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 68/127 (53%), Positives = 89/127 (70%)

Query:     3 STGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR 62
             +T   S  +VIT+DV  A+ LL+SGY +LDVRT EEFK+GHVD+  +FN+PY   TP+G+
Sbjct:    23 TTTSMSEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQ 82

Query:    63 VKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
               NP+FLK V SLC + D L++GC+SG RSLHAT  L+ +GFK V N  GG++AWV    
Sbjct:    83 EINPNFLKHVSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRF 142

Query:   123 KVKAREK 129
              VK   K
Sbjct:   143 PVKVEHK 149

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0001666 "response to hypoxia" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2156882 STR18 "AT5G66170" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 69/128 (53%), Positives = 92/128 (71%)

Query:     4 TGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
             +  +   EV++VDV  AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRV
Sbjct:     6 SSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV 65

Query:    64 KNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA--GFKHVSNFGGGHMAWVQNG 121
             KN +FL++V SL    D ++VGCQSGARSL AT +L+ A  G+K V N GGG++AWV + 
Sbjct:    66 KNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHS 125

Query:   122 LKVKAREK 129
               +   E+
Sbjct:   126 FPINTEEE 133

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:505006261 AT2G21045 [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 66/132 (50%), Positives = 85/132 (64%)

Query:     1 MDSTGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE 60
             M+ T   +  +V TVDV  AK  L +G+ YLDVRT EEF + HV+ A   NIPYMF T E
Sbjct:    30 MEETKPKTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEA--LNIPYMFKTDE 87

Query:    61 GRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
             GRV NPDFL +V S+CK+++ L+V C +G R   A  DLL  G+ HV+N GGG+ AWV  
Sbjct:    88 GRVINPDFLSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDA 147

Query:   121 GLKVKAREKPAD 132
             G    A +KP +
Sbjct:   148 GF---AGDKPPE 156

GO:0005737 "cytoplasm" evidence=ISM

GO:0007568 "aging" evidence=ISS;TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

UNIPROTKB|B2C7Y6 NRIP1 "Chloroplast N receptor-interacting protein 1" [Nicotiana benthamiana (taxid:4100)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 55/109 (50%), Positives = 72/109 (66%)

Query:    14 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
             +V VR A  LL++G+ YLDVRTAEEF +GH   A   NIPYMF    G +KNP+F ++V 
Sbjct:    75 SVPVRVALELLQAGHRYLDVRTAEEFSDGHAPGA--INIPYMFRIGSGMIKNPNFAEQVL 132

Query:    74 SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
                 ++D ++VGCQ G RS  A  DLL AGF  V++  GG+ AW +NGL
Sbjct:   133 EHFGKDDEIIVGCQLGKRSFMAATDLLAAGFSGVTDIAGGYAAWTENGL 181

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2156937 STR16 "AT5G66040" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 58/113 (51%), Positives = 73/113 (64%)

Query:    14 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
             +V V  A +LL +G+ YLDVRT EEF +GH   A   N+PYM     G  KNPDFL++V 
Sbjct:    10 SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNPDFLEQVS 67

Query:    74 SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
             S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct:    68 SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 120

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

TAIR|locus:2128038 SEN1 "AT4G35770" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 51/112 (45%), Positives = 74/112 (66%)

Query:    14 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
             +V VR A+ L ++GY YLDVRT +EF  GH   A   N+PYM+    G VKNP FL++V 
Sbjct:    72 SVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRA--INVPYMYRVGSGMVKNPSFLRQVS 129

Query:    74 SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125
             S  ++ D +++GC+SG  S  A+ DLL AGF  +++  GG++AW +N L V+
Sbjct:   130 SHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPVE 181

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=IEP;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2059999 AT2G42220 "AT2G42220" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query:    56 FNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVS 108
             F  P  +V NP+FLK VR+   ++ +L++ CQ G RS  A + L  AG+++++
Sbjct:   116 FGLPFTKV-NPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRLEEAGYENIA 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

UNIPROTKB|F1S179 TSTD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 38/110 (34%), Positives = 50/110 (45%)

Query:    14 TVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV 72
             TV +   ++LL SG   L DVR+ EE   G +  A   NIP +          P   K +
Sbjct:    22 TVSLSELRSLLASGRARLIDVRSREEAAAGTIPGA--LNIP-VSELESALQMEPAAFKAL 78

Query:    73 RSLCK---EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
              S  K   EE+ L+  CQ G R L AT    G G+K   N+ G +  W Q
Sbjct:    79 YSAEKPKLEEENLIFFCQMGKRGLQATQLAQGLGYKGARNYEGAYREWFQ 128

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q607E4 MCA1816 "Sulfurtransferase" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 36/97 (37%), Positives = 50/97 (51%)

Query:    31 LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQSG 89
             LDVR  EE+  GH+  A   NIP      E R++ +P F  K      ++  +VV CQSG
Sbjct:    34 LDVREPEEYAAGHLPGA--INIPR--GVVEFRIETHPVFQGK------KDAAIVVYCQSG 83

Query:    90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
              RS  AT  L   G++   +  GG  AW++ GL V +
Sbjct:    84 LRSTLATDILQQLGWRGTVSMAGGFKAWIEGGLPVSS 120

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPAC4H3.07c SPAC4H3.07c "protein phosphatase Fmp31 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query:    31 LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE--EDRLVVGCQS 88
             +DVR  +EFK+G ++ +  +N+P        ++ + +F  K     K   ED +VV C+S
Sbjct:    50 IDVREPDEFKQGAIETS--YNLPVGKIEEAMKLSDEEF-SKTYGFSKPVFEDNVVVYCRS 106

Query:    89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 127
             G RS  A+  L   G+K++ N+ G  + W     K+K++
Sbjct:   107 GRRSTTASDILTKLGYKNIGNYTGSWLEWSD---KIKSK 142

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FKW8	STR18_ARATH	2, ., 8, ., 1, ., 1	0.5476	0.9197	0.9264	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.8.1.1	0.914
3rd Layer	2.8.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_570170 hypothetical protein (134 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	137
PLN02160	136	PLN02160, PLN02160, thiosulfate sulfurtransferase	4e-46
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	2e-15
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	1e-14
PRK08762	376	PRK08762, PRK08762, molybdopterin biosynthesis pro	9e-12
COG0607	110	COG0607, PspE, Rhodanese-related sulfurtransferase	2e-11
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	2e-11
cd01522	117	cd01522, RHOD_1, Member of the Rhodanese Homology	1e-09
cd01519	106	cd01519, RHOD_HSP67B2, Member of the Rhodanese Hom	1e-09
PRK07878	392	PRK07878, PRK07878, molybdopterin biosynthesis-lik	9e-08
PRK07411	390	PRK07411, PRK07411, hypothetical protein; Validate	1e-06
cd01528	101	cd01528, RHOD_2, Member of the Rhodanese Homology	1e-06
cd01447	103	cd01447, Polysulfide_ST, Polysulfide-sulfurtransfe	3e-06
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	7e-06
PRK05597	355	PRK05597, PRK05597, molybdopterin biosynthesis pro	8e-06
cd01529	96	cd01529, 4RHOD_Repeats, Member of the Rhodanese Ho	4e-05
cd01524	90	cd01524, RHOD_Pyr_redox, Member of the Rhodanese H	7e-05
PRK10287	104	PRK10287, PRK10287, thiosulfate:cyanide sulfurtran	2e-04
TIGR02981	101	TIGR02981, phageshock_pspE, phage shock operon rho	4e-04
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	6e-04
cd01523	100	cd01523, RHOD_Lact_B, Member of the Rhodanese Homo	0.004

>gnl|CDD|177819 PLN02160, PLN02160, thiosulfate sulfurtransferase

 Score =  145 bits (368), Expect = 4e-46
 Identities = 68/115 (59%), Positives = 88/115 (76%)

Query: 4   TGKSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
           +  +   EV++VDV  AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRV
Sbjct: 6   SSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV 65

Query: 64  KNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 118
           KN +FL++V SL    D ++VGCQSGARSL AT +L+ AG+K V N GGG++AWV
Sbjct: 66  KNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNKGGGYLAWV 120

Length = 136

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 66.3 bits (162), Expect = 2e-15
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 31  LDVRTAEEFKEGHVDAAKIFNIPYM-FNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQS 88
           LDVR+ EE++ GH+  A   NIP        G +   +F + ++ L   ++  +VV C+S
Sbjct: 8   LDVRSPEEYEGGHIPGAV--NIPLSELLDRRGELDILEFEELLKRLGLDKDKPVVVYCRS 65

Query: 89  GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
           G RS  A   L   GFK+V    GG+  W   G 
Sbjct: 66  GNRSAKAAWLLRELGFKNVYLLDGGYKEWSAAGP 99

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 64.2 bits (157), Expect = 1e-14
 Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 12/100 (12%)

Query: 19  AAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE 78
             + L +     LDVR  EE+  GH+  A   NIP             +    +  L K+
Sbjct: 2   LKELLDDEDAVLLDVREPEEYAAGHIPGAI--NIPLS---------ELEERAALLELDKD 50

Query: 79  EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 118
              +VV C+SG RS  A   L  AG  +V N  GG +AW 
Sbjct: 51  -KPIVVYCRSGNRSARAAKLLRKAGGTNVYNLEGGMLAWK 89

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|236337 PRK08762, PRK08762, molybdopterin biosynthesis protein MoeB; Validated

 Score = 60.4 bits (147), Expect = 9e-12
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)

Query: 15  VDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS 74
           +    A+     G   +DVR A E   G  + A      ++    E  + + D       
Sbjct: 5   ISPAEARARAAQGAVLIDVREAHERASGQAEGALRIPRGFLELRIETHLPDRD------- 57

Query: 75  LCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP 130
                  +V+ C SG RS HA A L   G+  V++  GG  AW   GL +   E+P
Sbjct: 58  -----REIVLICASGTRSAHAAATLRELGYTRVASVAGGFSAWKDAGLPL---ERP 105

Length = 376

>gnl|CDD|223680 COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 56.9 bits (137), Expect = 2e-11
 Identities = 40/114 (35%), Positives = 50/114 (43%), Gaps = 12/114 (10%)

Query: 12  VITVDVRAAKNLLESGYG-YLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 70
           + T+    A  LL       LDVR  EE++ GH+  A   NIP          +N   L 
Sbjct: 4   LETISEDEAALLLAGEDAVLLDVREPEEYERGHIPGA-AINIPLSELKAA---ENLLELP 59

Query: 71  KVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124
                   +D +VV C SG RS  A A L  AGF +V N  GG  AW   GL +
Sbjct: 60  D-------DDPIVVYCASGVRSAAAAAALKLAGFTNVYNLDGGIDAWKGAGLPL 106

Length = 110

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 56.0 bits (135), Expect = 2e-11
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 19  AAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE 78
               L       +DVR+ EE+ +GH+  A   NIP    + +   K    L+++     +
Sbjct: 5   LKALLEADDVVLIDVRSPEEYAKGHIPGA--VNIPLSLPSLD---KLESELEELGKKLDK 59

Query: 79  EDRLVVGCQSGARSLHATADLLG-----AGFKHVSNFGGGHMAWVQ 119
           +  +VV C SG RS  A A LL       G+K+V    GG  AW  
Sbjct: 60  DKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGGFEAWKA 105

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|238780 cd01522, RHOD_1, Member of the Rhodanese Homology Domain superfamily, subgroup 1

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 31  LDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89
           +DVRT  E+K  G V      ++ +          NP+FL ++     ++  +++ C+SG
Sbjct: 19  VDVRTEAEWKFVGGV--PDAVHVAW--QVYPDMEINPNFLAELEEKVGKDRPVLLLCRSG 74

Query: 90  ARSLHATADLLGAGFKHVSN 109
            RS+ A      AGF +V N
Sbjct: 75  NRSIAAAEAAAQAGFTNVYN 94

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins. Length = 117

>gnl|CDD|238777 cd01519, RHOD_HSP67B2, Member of the Rhodanese Homology Domain superfamily

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 13/94 (13%)

Query: 32  DVRTAEEFKEGHVDAAKIFNIPY-----MFNTPEGRVKNPDFLKKV-RSLCKEEDRLVVG 85
           DVR  EE K G +  A   NIP           E      +F KK       ++  L+  
Sbjct: 20  DVREPEELKTGKIPGA--INIPLSSLPDALALSEE-----EFEKKYGFPKPSKDKELIFY 72

Query: 86  CQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           C++G RS  A       G+++V N+ G  + W  
Sbjct: 73  CKAGVRSKAAAELARSLGYENVGNYPGSWLDWAA 106

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized. Length = 106

>gnl|CDD|181156 PRK07878, PRK07878, molybdopterin biosynthesis-like protein MoeZ; Validated

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 14  TVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 71
           T+  R  K  L+SG     +DVR   E+   H+  A++         P+  + + + L K
Sbjct: 288 TITPRELKEWLDSGKKIALIDVREPVEWDIVHIPGAQLI--------PKSEILSGEALAK 339

Query: 72  VRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           +     ++  +V+ C++G RS  A A L  AGF    +  GG +AW +
Sbjct: 340 L----PQDRTIVLYCKTGVRSAEALAALKKAGFSDAVHLQGGVVAWAK 383

Length = 392

>gnl|CDD|180967 PRK07411, PRK07411, hypothetical protein; Validated

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)

Query: 10  AEVITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP 66
           AE+  + V   K LL+SG   +  +DVR   E++        I  IP     P   ++N 
Sbjct: 279 AEIPEMTVTELKALLDSGADDFVLIDVRNPNEYE--------IARIPGSVLVPLPDIENG 330

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
             ++KV+ L     RL+  C+ G RS  A   L  AG +   N  GG  AW +
Sbjct: 331 PGVEKVKELLNGH-RLIAHCKMGGRSAKALGILKEAGIEGT-NVKGGITAWSR 381

Length = 390

>gnl|CDD|238786 cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 31  LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90
           +DVR  EE         +I  +P   + P   +  P+  K++ S   ++D +VV C  G 
Sbjct: 21  IDVREPEE--------LEIAFLPGFLHLPMSEI--PERSKELDSDNPDKD-IVVLCHHGG 69

Query: 91  RSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
           RS+     LL  GF++V N  GG  AW  
Sbjct: 70  RSMQVAQWLLRQGFENVYNLQGGIDAWSL 98

Subgroup 2 includes uncharacterized putative rhodanese-related domains. Length = 101

>gnl|CDD|238724 cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 18  RAAKNLLESGYGYLDVRTAEEFK-EGHVDAAKIFNIPY-MFN---TPEGRVKNPDFLKKV 72
            A   L   G   +DVR   E +  G +  A  F+ P  M      P+     P F    
Sbjct: 5   DARALLGSPGVLLVDVRDPRELERTGMIPGA--FHAPRGMLEFWADPDSPYHKPAF---- 58

Query: 73  RSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
                E+   V  C SG RS  A   L   G K V N  GG   W + G
Sbjct: 59  ----AEDKPFVFYCASGWRSALAGKTLQDMGLKPVYNIEGGFKDWKEAG 103

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins. Length = 103

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 16/103 (15%)

Query: 31  LDVRTAEEF-----------KEGHVDAAKIFNIPYM-FNTPEGRVKNPDFLKKV--RSLC 76
           +D R+ E F           + GH+  A   NIP+      +G  K+P+ L+ +      
Sbjct: 18  VDARSPERFRGEVPEPRPGLRSGHIPGAV--NIPWTSLLDEDGTFKSPEELRALFAALGI 75

Query: 77  KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
             +  ++V C SG  +      L   G+K+V  + G    W  
Sbjct: 76  TPDKPVIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS 118

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|235526 PRK05597, PRK05597, molybdopterin biosynthesis protein MoeB; Validated

 Score = 43.3 bits (102), Expect = 8e-06
 Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 22/113 (19%)

Query: 8   SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--- 64
            G  +    V A    L  G   +DVR   EF            IP   N P   ++   
Sbjct: 259 FGEVLDVPRVSA----LPDGVTLIDVREPSEFAAYS--------IPGAHNVPLSAIREGA 306

Query: 65  NPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
           NP  +          D +VV C +G RS  A A L  AG+  +S+  GG   W
Sbjct: 307 NPPSVSA-------GDEVVVYCAAGVRSAQAVAILERAGYTGMSSLDGGIEGW 352

Length = 355

>gnl|CDD|238787 cd01529, 4RHOD_Repeats, Member of the Rhodanese Homology Domain superfamily

 Score = 39.6 bits (92), Expect = 4e-05
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 25  ESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR-VKNPDFLKKVRSLCKEEDRLV 83
           E G   LDVR  +E+  GH        +P   + P    V     L+ + +  +   R V
Sbjct: 10  EPGTALLDVRAEDEYAAGH--------LPGKRSIPGAALVLRSQELQALEAPGRAT-RYV 60

Query: 84  VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 118
           + C     +  A  +LL  G K V+   GG  AWV
Sbjct: 61  LTCDGSLLARFAAQELLALGGKPVALLDGGTSAWV 95

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats. Length = 96

>gnl|CDD|238782 cd01524, RHOD_Pyr_redox, Member of the Rhodanese Homology Domain superfamily

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 21/95 (22%)

Query: 22  NLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDR 81
           N    G   +DVRT +EF++GH+  A   NIP               L ++R    E  +
Sbjct: 8   NYRADGVTLIDVRTPQEFEKGHIKGA--INIP---------------LDELRDRLNELPK 50

Query: 82  ---LVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113
              ++V C  G R   A   L   GFK V N  GG
Sbjct: 51  DKEIIVYCAVGLRGYIAARILTQNGFK-VKNLDGG 84

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain. Length = 90

>gnl|CDD|182356 PRK10287, PRK10287, thiosulfate:cyanide sulfurtransferase; Provisional

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 22/88 (25%)

Query: 30  YLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE-----EDRLVV 84
           ++DVR  E++++ HV  A   NIP               LK+V+           D + +
Sbjct: 23  WIDVRVPEQYQQEHVQGA--INIP---------------LKEVKERIATAVPDKNDTVKL 65

Query: 85  GCQSGARSLHATADLLGAGFKHVSNFGG 112
            C +G +S  A   L   G+ H  N GG
Sbjct: 66  YCNAGRQSGQAKEILSEMGYTHAENAGG 93

Length = 104

>gnl|CDD|132026 TIGR02981, phageshock_pspE, phage shock operon rhodanese PspE

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 22/88 (25%)

Query: 30  YLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS-----LCKEEDRLVV 84
           ++DVR  E++++ H+  A   NIP               LK+++      +  + D + +
Sbjct: 21  WIDVRIPEQYQQEHIQGA--INIP---------------LKEIKEHIATAVPDKNDTVKL 63

Query: 85  GCQSGARSLHATADLLGAGFKHVSNFGG 112
            C +G +S  A   LL  G+ H  N GG
Sbjct: 64  YCNAGRQSGMAKDILLDMGYTHAENAGG 91

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely. Length = 101

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 19/104 (18%)

Query: 31  LDVRTAEEF----------KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE-- 78
           +D R+ E F          K GH+  A   NIP+     +G +           L  +  
Sbjct: 175 IDARSPERFRGKEPEPRDGKAGHIPGAI--NIPWTDLVDDGGLFKSPEEIAR--LYADAG 230

Query: 79  ---EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
              +  ++V C SG R+      L   G  +   + G    W  
Sbjct: 231 IDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGS 274

Length = 285

>gnl|CDD|238781 cd01523, RHOD_Lact_B, Member of the Rhodanese Homology Domain superfamily

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 31  LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90
           LDVR   +++   +D     N PY F+     ++  + +  +  L  +++  V+ C    
Sbjct: 19  LDVRNESDYERWKIDGE--NNTPY-FDPYFDFLEIEEDI--LDQLPDDQEVTVI-CAKEG 72

Query: 91  RSLHATADLLGAGFKHVSNFGGGHMAW 117
            S    A+LL      V    GG  AW
Sbjct: 73  SSQF-VAELLAERGYDVDYLAGGMKAW 98

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain. Length = 100

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
PLN02160	136	thiosulfate sulfurtransferase	99.96
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.95
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.93
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.93
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.92
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.92
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.92
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.91
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.91
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.9
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.9
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.9
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.9
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.9
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.89
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.89
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.89
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.89
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.89
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.88
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.88
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.88
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.88
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.88
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.87
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.87
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.86
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.86
PRK01415	247	hypothetical protein; Validated	99.86
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.85
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.85
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.85
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.85
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.85
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.84
PRK05320	257	rhodanese superfamily protein; Provisional	99.84
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.84
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.84
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.83
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.83
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.83
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.83
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.83
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.83
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.82
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.81
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.78
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.78
PRK07411	390	hypothetical protein; Validated	99.77
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.77
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.76
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.73
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.68
COG1054	308	Predicted sulfurtransferase [General function pred	99.6
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	99.56
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.44
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	99.38
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	99.31
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.16
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	98.9
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	98.18
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	98.11
COG2603	334	Predicted ATPase [General function prediction only	98.0
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.42
PF13350	164	Y_phosphatase3: Tyrosine phosphatase family; PDB:	97.27
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	96.68
cd00127	139	DSPc Dual specificity phosphatases (DSP); Ser/Thr	96.48
PLN02727	986	NAD kinase	96.05
COG3453	130	Uncharacterized protein conserved in bacteria [Fun	95.86
KOG3636	669	consensus Uncharacterized conserved protein, conta	95.5
smart00195	138	DSPc Dual specificity phosphatase, catalytic domai	94.83
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	94.35
KOG1717	343	consensus Dual specificity phosphatase [Defense me	93.73
PTZ00242	166	protein tyrosine phosphatase; Provisional	92.36
PRK12361	547	hypothetical protein; Provisional	92.27
PF05706	168	CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3)	91.69
PF00782	133	DSPc: Dual specificity phosphatase, catalytic doma	91.21
PTZ00393	241	protein tyrosine phosphatase; Provisional	91.14
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	90.99
PF01451	138	LMWPc: Low molecular weight phosphotyrosine protei	89.97
smart00226	140	LMWPc Low molecular weight phosphatase family.	89.4
COG2453	180	CDC14 Predicted protein-tyrosine phosphatase [Sign	89.39
PF09992	170	DUF2233: Predicted periplasmic protein (DUF2233);	88.49
PF03853	169	YjeF_N: YjeF-related protein N-terminus; InterPro:	88.32
TIGR02689	126	ars_reduc_gluta arsenate reductase, glutathione/gl	86.2
PRK10126	147	tyrosine phosphatase; Provisional	85.6
PRK11391	144	etp phosphotyrosine-protein phosphatase; Provision	83.2
COG0062	203	Uncharacterized conserved protein [Function unknow	82.82
PRK13530	133	arsenate reductase; Provisional	82.67
cd00115	141	LMWPc Substituted updates: Aug 22, 2001	81.84
PF03162	164	Y_phosphatase2: Tyrosine phosphatase family; Inter	81.46
TIGR00197	205	yjeF_nterm yjeF N-terminal region. This model is b	81.25

>PLN02160 thiosulfate sulfurtransferase

Probab=99.96  E-value=1.3e-27  Score=159.02  Aligned_cols=121  Identities=57%  Similarity=0.966  Sum_probs=103.7

Q ss_pred             ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      .++.++++++.+.++.+..|||||++.||..||||||..+|+|+..+.+...+...++...+...++++++||+||++|.
T Consensus        13 ~~~~i~~~e~~~~~~~~~~lIDVR~~~E~~~ghIpgA~~iniP~~~~~~~~~l~~~~~~~~~~~~~~~~~~IivyC~sG~   92 (136)
T PLN02160         13 EVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVSSLLNPADDILVGCQSGA   92 (136)
T ss_pred             eeeEeCHHHHHHHHhCCCEEEECCCHHHHhcCCCCCcceecccchhcCcccccCCHHHHHHHHhccCCCCcEEEECCCcH
Confidence            57899999999999887889999999999999999997778888655444555555666656554578899999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA  131 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~~  131 (137)
                      ||..++..|...||++|+.|.||+.+|.+.|+|+.+....+
T Consensus        93 RS~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~  133 (136)
T PLN02160         93 RSLKATTELVAAGYKKVRNKGGGYLAWVDHSFPINQEEEEP  133 (136)
T ss_pred             HHHHHHHHHHHcCCCCeeecCCcHHHHhhCCCCccccccCC
Confidence            99999999999999999999999999999999999865443

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.95  E-value=4.4e-27  Score=151.41  Aligned_cols=113  Identities=45%  Similarity=0.739  Sum_probs=104.8

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQ   87 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~   87 (137)
                      ..+..++++++.++++.+ .++||||+++||..||+|.+  ||||+....+...+.+++|..+++.. ...+++|||+|.
T Consensus        20 ~~~~sv~~~qvk~L~~~~~~~llDVRepeEfk~gh~~~s--iNiPy~~~~~~~~l~~~eF~kqvg~~kp~~d~eiIf~C~   97 (136)
T KOG1530|consen   20 SNPQSVSVEQVKNLLQHPDVVLLDVREPEEFKQGHIPAS--INIPYMSRPGAGALKNPEFLKQVGSSKPPHDKEIIFGCA   97 (136)
T ss_pred             CCcEEEEHHHHHHHhcCCCEEEEeecCHHHhhccCCcce--EeccccccccccccCCHHHHHHhcccCCCCCCcEEEEec
Confidence            556899999999999998 99999999999999999998  99999888888889999999999988 555669999999


Q ss_pred             CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           88 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      +|.||..|...|...||+||.++.|||.+|.+.++|.
T Consensus        98 SG~Rs~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~~~~  134 (136)
T KOG1530|consen   98 SGVRSLKATKILVSAGYKNVGNYPGSYLAWVDKGGPK  134 (136)
T ss_pred             cCcchhHHHHHHHHcCcccccccCccHHHHHHccCCC
Confidence            9999999999999999999999999999999998875

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.93  E-value=1.7e-25  Score=143.54  Aligned_cols=100  Identities=22%  Similarity=0.391  Sum_probs=86.8

Q ss_pred             CCceeeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEE
Q 032621            9 GAEVITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVG   85 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~   85 (137)
                      ....+.++++++.+.++++  .+|||||++.||..||||||  +|+|+.           ++...+..+ .+++++||+|
T Consensus         6 ~~~~~~i~~~~l~~~~~~~~~~~liDvR~~~e~~~ghIpga--inip~~-----------~l~~~~~~l~~~~~~~ivv~   72 (109)
T cd01533           6 VRHTPSVSADELAALQARGAPLVVLDGRRFDEYRKMTIPGS--VSCPGA-----------ELVLRVGELAPDPRTPIVVN   72 (109)
T ss_pred             cccCCcCCHHHHHHHHhcCCCcEEEeCCCHHHHhcCcCCCc--eeCCHH-----------HHHHHHHhcCCCCCCeEEEE
Confidence            3456789999999998764  58999999999999999999  999995           555566555 3567899999


Q ss_pred             eCCCchHHHHHHHHHHCCccc-eeeccccHHHHHhCC
Q 032621           86 CQSGARSLHATADLLGAGFKH-VSNFGGGHMAWVQNG  121 (137)
Q Consensus        86 c~~g~ra~~~~~~l~~~G~~~-v~~l~GG~~~w~~~~  121 (137)
                      |++|.||..+++.|+..||++ ++.|+||+.+|...|
T Consensus        73 C~~G~rs~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          73 CAGRTRSIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCCCchHHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            999999999999999999988 899999999998764

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.93  E-value=9e-25  Score=139.94  Aligned_cols=104  Identities=26%  Similarity=0.377  Sum_probs=91.9

Q ss_pred             CceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ...+.++++++.+.++. +.++||+|++.+|..||||||  +|+|+.           .+...+.. ++++++|++||.+
T Consensus         2 ~~~~~is~~el~~~l~~~~~~ivDvR~~~e~~~ghi~gA--~~ip~~-----------~l~~~~~~-~~~~~~ivv~c~~   67 (108)
T PRK00162          2 DQFECINVEQAHQKLQEGGAVLVDIRDPQSFAMGHAPGA--FHLTND-----------SLGAFMRQ-ADFDTPVMVMCYH   67 (108)
T ss_pred             CCccccCHHHHHHHHHcCCCEEEEcCCHHHHhcCCCCCC--eECCHH-----------HHHHHHHh-cCCCCCEEEEeCC
Confidence            35678999999999865 478999999999999999999  999984           55555555 4788999999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR  127 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~  127 (137)
                      |.+|..++..|+..||++|++|+||+.+|...++|++..
T Consensus        68 g~~s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~~~~~~~  106 (108)
T PRK00162         68 GNSSQGAAQYLLQQGFDVVYSIDGGFEAWRRTFPAEVAS  106 (108)
T ss_pred             CCCHHHHHHHHHHCCchheEEecCCHHHHHhcCCCccCC
Confidence            999999999999999999999999999999999998763

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.92  E-value=7.2e-25  Score=138.20  Aligned_cols=98  Identities=22%  Similarity=0.328  Sum_probs=85.3

Q ss_pred             eeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchH
Q 032621           13 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS   92 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra   92 (137)
                      +.|+++++.+.++.+.+|||+|++.+|..||||||  +|+|+..+           ...... ++++++||+||++|.+|
T Consensus         2 ~~i~~~el~~~~~~~~~liDvR~~~e~~~~hi~ga--~~ip~~~~-----------~~~~~~-~~~~~~iv~~c~~g~~s   67 (99)
T cd01527           2 TTISPNDACELLAQGAVLVDIREPDEYLRERIPGA--RLVPLSQL-----------ESEGLP-LVGANAIIFHCRSGMRT   67 (99)
T ss_pred             CccCHHHHHHHHHCCCEEEECCCHHHHHhCcCCCC--EECChhHh-----------cccccC-CCCCCcEEEEeCCCchH
Confidence            57899999999988889999999999999999999  99998532           221111 47889999999999999


Q ss_pred             HHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           93 LHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      ..++..|.+.||+++++|+||+.+|...++|+
T Consensus        68 ~~~~~~L~~~g~~~v~~l~gG~~~W~~~~~~~   99 (99)
T cd01527          68 QQNAERLAAISAGEAYVLEGGLDAWKAAGLPV   99 (99)
T ss_pred             HHHHHHHHHcCCccEEEeeCCHHHHHHCcCCC
Confidence            99999999999999999999999999988774

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.92  E-value=7.2e-25  Score=138.79  Aligned_cols=95  Identities=26%  Similarity=0.336  Sum_probs=79.5

Q ss_pred             eeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEeCCCc
Q 032621           14 TVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGA   90 (137)
Q Consensus        14 ~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~   90 (137)
                      .|+++++.++++.+ .+|||||++.||..||||||  +|+|+..+.        .+...+...  .+++++||+||++|.
T Consensus         3 ~is~~~l~~~~~~~~~~iiDvR~~~e~~~ghi~gA--~~ip~~~~~--------~~~~~~~~~~~~~~~~~ivvyC~~G~   72 (101)
T cd01518           3 YLSPAEWNELLEDPEVVLLDVRNDYEYDIGHFKGA--VNPDVDTFR--------EFPFWLDENLDLLKGKKVLMYCTGGI   72 (101)
T ss_pred             cCCHHHHHHHHcCCCEEEEEcCChhhhhcCEeccc--cCCCcccHh--------HhHHHHHhhhhhcCCCEEEEECCCch
Confidence            58899999988764 78999999999999999999  999985321        112222221  368899999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      ||..++.+|..+||++|++|+||+.+|.
T Consensus        73 rs~~a~~~L~~~G~~~v~~l~GG~~~W~  100 (101)
T cd01518          73 RCEKASAYLKERGFKNVYQLKGGILKYL  100 (101)
T ss_pred             hHHHHHHHHHHhCCcceeeechhHHHHh
Confidence            9999999999999999999999999995

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.92  E-value=1.1e-24  Score=138.68  Aligned_cols=102  Identities=27%  Similarity=0.428  Sum_probs=85.2

Q ss_pred             CHHHHHHHhh-C-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchH
Q 032621           16 DVRAAKNLLE-S-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARS   92 (137)
Q Consensus        16 s~~~~~~~~~-~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra   92 (137)
                      |++++.+.++ . +.+|||+|++.+|..||||||  +|+|+..+.....+...+|.+.+... ++++++||+||++|.+|
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s   79 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVREPEELKTGKIPGA--INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRS   79 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECCCHHHHhcCcCCCc--EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHH
Confidence            6788888887 4 488999999999999999999  99998765332233344676666655 56789999999999999


Q ss_pred             HHHHHHHHHCCccceeeccccHHHHHh
Q 032621           93 LHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      ..+++.|..+||++|+.|+||+.+|.+
T Consensus        80 ~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          80 KAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             HHHHHHHHHcCCccceecCCcHHHHcC
Confidence            999999999999999999999999953

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.91  E-value=9.9e-24  Score=144.13  Aligned_cols=117  Identities=21%  Similarity=0.301  Sum_probs=90.3

Q ss_pred             CCCCCceeeeCHHHHHHHhhCC-CEEEecCChH----HHhcc---------CCCCceeeCccccccCCCCCCCChHHHHH
Q 032621            6 KSSGAEVITVDVRAAKNLLESG-YGYLDVRTAE----EFKEG---------HVDAAKIFNIPYMFNTPEGRVKNPDFLKK   71 (137)
Q Consensus         6 ~~~~~~~~~is~~~~~~~~~~~-~~viDvR~~~----e~~~g---------~ipga~~inip~~~~~~~~~~~~~~~~~~   71 (137)
                      +.+......|+++++.++++++ .+|||||+..    +|..|         |||||  +|+|+...........+.|...
T Consensus        29 ~~~~~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~~~e~~~G~~~~~~~~~HIPGA--v~ip~~~~~~l~~~~~~~~~~~  106 (162)
T TIGR03865        29 PATLKGARVLDTEAAQALLARGPVALIDVYPRPPKPKNLLEGTVWRDEPRLNIPGS--LWLPNTGYGNLAPAWQAYFRRG  106 (162)
T ss_pred             CcccCCccccCHHHHHHHHhCCCcEEEECCCCccccccccccceeccccCCCCCCc--EEecccCCCCCCCchhHHHHHH
Confidence            3455667899999999999875 8899999865    45544         99999  8888632111111111235556


Q ss_pred             HHhh--ccCCCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           72 VRSL--CKEEDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        72 ~~~~--~~~~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      +...  .+++++||+||++|. +|..+++.|+.+||++|++|+||+.+|...|+|+
T Consensus       107 l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG~Pv  162 (162)
T TIGR03865       107 LERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAGLPL  162 (162)
T ss_pred             HHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcCCCC
Confidence            6544  368899999999986 8999999999999999999999999999999985

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.91  E-value=5.8e-24  Score=133.26  Aligned_cols=90  Identities=22%  Similarity=0.310  Sum_probs=76.8

Q ss_pred             eCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCc
Q 032621           15 VDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGA   90 (137)
Q Consensus        15 is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~   90 (137)
                      ||++++.++++++   ++|||||++.||..||||||  +|+|+.           ++....... ..++++||+||.+|.
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR~~~e~~~ghipga--~~ip~~-----------~l~~~~~~~~~~~~~~iv~~c~~G~   67 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVRTPEEYEAGHLPGF--RHTPGG-----------QLVQETDHFAPVRGARIVLADDDGV   67 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECCCHHHHHhCCCCCc--EeCCHH-----------HHHHHHHHhcccCCCeEEEECCCCC
Confidence            5789999998764   67999999999999999999  999984           444443333 235778999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      ||..++.+|+..||+ |+.|+||+.+|.
T Consensus        68 rs~~aa~~L~~~G~~-v~~l~GG~~~W~   94 (95)
T cd01534          68 RADMTASWLAQMGWE-VYVLEGGLAAAL   94 (95)
T ss_pred             hHHHHHHHHHHcCCE-EEEecCcHHHhc
Confidence            999999999999999 999999999995

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.90  E-value=1.5e-23  Score=138.14  Aligned_cols=102  Identities=25%  Similarity=0.371  Sum_probs=79.8

Q ss_pred             eCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCC-------------------C---CChHHHHHH
Q 032621           15 VDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR-------------------V---KNPDFLKKV   72 (137)
Q Consensus        15 is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~-------------------~---~~~~~~~~~   72 (137)
                      ||++++.+.++.+.+|||||++.||..||||||  +|||+........                   +   ..+++...+
T Consensus         1 ~s~~el~~~l~~~~~iiDvR~~~e~~~ghIpgA--inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (128)
T cd01520           1 ITAEDLLALRKADGPLIDVRSPKEFFEGHLPGA--INLPLLDDEERALVGTLYKQQGREAAIELGLELVSGKLKRILNEA   78 (128)
T ss_pred             CCHHHHHHHHhcCCEEEECCCHHHhccCcCCCc--EEccCCChhHHHHhhhheeccCHHHHHHHHHHHHhhhHHHHHHHH
Confidence            688999999987789999999999999999999  9999853211000                   0   001233333


Q ss_pred             Hh-hccCCCcEEEEeC-CCchHHHHHHHHHHCCccceeeccccHHHHHh
Q 032621           73 RS-LCKEEDRLVVGCQ-SGARSLHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        73 ~~-~~~~~~~iv~~c~-~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      .. .++++++||+||+ +|.||..+++.|+.+|| +|++|+||+.+|..
T Consensus        79 ~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          79 WEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             HHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            21 2688999999997 68999999999999999 59999999999964

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.90  E-value=3.7e-23  Score=130.93  Aligned_cols=93  Identities=27%  Similarity=0.473  Sum_probs=79.4

Q ss_pred             eCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEeCCC
Q 032621           15 VDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSG   89 (137)
Q Consensus        15 is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g   89 (137)
                      |+++++.+.++.+   .+|||+|+..||..+|||||  +|+|+.           ++...+...  .++++++|+||++|
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR~~~e~~~~hI~ga--~~ip~~-----------~~~~~~~~~~~~~~~~~vv~~c~~g   68 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVREPEELEIAFLPGF--LHLPMS-----------EIPERSKELDSDNPDKDIVVLCHHG   68 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECCCHHHHhcCcCCCC--EecCHH-----------HHHHHHHHhcccCCCCeEEEEeCCC
Confidence            6889999998864   78999999999999999999  999985           333333333  14588999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      .||..++.+|.+.||++|++|+||+.+|.+.
T Consensus        69 ~rs~~~~~~l~~~G~~~v~~l~GG~~~w~~~   99 (101)
T cd01528          69 GRSMQVAQWLLRQGFENVYNLQGGIDAWSLE   99 (101)
T ss_pred             chHHHHHHHHHHcCCccEEEecCCHHHHhhh
Confidence            9999999999999999999999999999653

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.90  E-value=2.1e-23  Score=131.81  Aligned_cols=94  Identities=24%  Similarity=0.385  Sum_probs=78.0

Q ss_pred             eCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHH---HHHHHhhccCCCcEEEEeCCC
Q 032621           15 VDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDF---LKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        15 is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      |+++++.+.++++  .+|||||++.||..||||||  +|+|+..+..       .+   .......++++++||+||.+|
T Consensus         1 is~~el~~~l~~~~~~~liDvR~~~e~~~ghi~ga--~~ip~~~~~~-------~~~~~~~~~~~~~~~~~~ivv~C~~G   71 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVRNESDYERWKIDGE--NNTPYFDPYF-------DFLEIEEDILDQLPDDQEVTVICAKE   71 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeCCHHHHhhcccCCC--cccccccchH-------HHHHhhHHHHhhCCCCCeEEEEcCCC
Confidence            5789999998774  68999999999999999999  9999852211       11   112223357889999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      .||..++..|++.||+ ++.|.||+.+|.
T Consensus        72 ~rs~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          72 GSSQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             CcHHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            9999999999999998 999999999995

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.90  E-value=5.5e-23  Score=132.10  Aligned_cols=99  Identities=27%  Similarity=0.456  Sum_probs=83.9

Q ss_pred             eeeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           12 VITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ...++++++.+.+..+   .+|||+|++.+|..||||||  +|+|..           .+.......++++++||+||++
T Consensus         7 ~~~~s~~el~~~l~~~~~~~~iiDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~~i~~~~~vvvyc~~   73 (110)
T cd01521           7 AFETDCWDVAIALKNGKPDFVLVDVRSAEAYARGHVPGA--INLPHR-----------EICENATAKLDKEKLFVVYCDG   73 (110)
T ss_pred             eeecCHHHHHHHHHcCCCCEEEEECCCHHHHhcCCCCCC--EeCCHH-----------HhhhHhhhcCCCCCeEEEEECC
Confidence            3689999999999753   78999999999999999999  999985           3332222335789999999998


Q ss_pred             Cc--hHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           89 GA--RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        89 g~--ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      |.  +|..+++.|+.+||+ +++|+||+.+|...|+|+
T Consensus        74 g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g~~~  110 (110)
T cd01521          74 PGCNGATKAALKLAELGFP-VKEMIGGLDWWKREGYAT  110 (110)
T ss_pred             CCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCCCCC
Confidence            74  899999999999996 999999999999998874

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.90  E-value=4.5e-23  Score=128.00  Aligned_cols=89  Identities=30%  Similarity=0.545  Sum_probs=78.9

Q ss_pred             eCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHH
Q 032621           15 VDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLH   94 (137)
Q Consensus        15 is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~   94 (137)
                      ++++++.++++.+.++||+|+.++|..||||||  +|+|+.           ++...+.. ++++++||+||++|.++..
T Consensus         1 ~~~~e~~~~~~~~~~iiD~R~~~~~~~~hipgA--~~ip~~-----------~~~~~~~~-~~~~~~vvl~c~~g~~a~~   66 (90)
T cd01524           1 VQWHELDNYRADGVTLIDVRTPQEFEKGHIKGA--INIPLD-----------ELRDRLNE-LPKDKEIIVYCAVGLRGYI   66 (90)
T ss_pred             CCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCC--EeCCHH-----------HHHHHHHh-cCCCCcEEEEcCCChhHHH
Confidence            468899999877789999999999999999999  999985           55555544 4788999999999999999


Q ss_pred             HHHHHHHCCccceeeccccHHHHH
Q 032621           95 ATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        95 ~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      ++..|+..|+ ++++|+||+.+|.
T Consensus        67 ~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          67 AARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             HHHHHHHCCC-CEEEecCCHHHhc
Confidence            9999999999 8999999999995

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.89  E-value=5.2e-23  Score=134.52  Aligned_cols=108  Identities=24%  Similarity=0.315  Sum_probs=85.6

Q ss_pred             CceeeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHH--HHHhhccCCCcEEEE
Q 032621           10 AEVITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK--KVRSLCKEEDRLVVG   85 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~--~~~~~~~~~~~iv~~   85 (137)
                      +....|+++++.+.+++  +.+|||+|++.||..||||||  +|+|+..+.....    .+..  .....++++++||+|
T Consensus         5 ~~~~~is~~el~~~~~~~~~~~ivDvR~~~e~~~~hIpga--i~ip~~~~~~~~~----~~~~~~~~~~~~~~~~~ivv~   78 (122)
T cd01526           5 SPEERVSVKDYKNILQAGKKHVLLDVRPKVHFEICRLPEA--INIPLSELLSKAA----ELKSLQELPLDNDKDSPIYVV   78 (122)
T ss_pred             CcccccCHHHHHHHHhCCCCeEEEEcCCHHHhhcccCCCC--eEccHHHHhhhhh----hhhhhhhcccccCCCCcEEEE
Confidence            44678999999999876  378999999999999999999  9999864321100    0000  001125788999999


Q ss_pred             eCCCchHHHHHHHHHHCCc-cceeeccccHHHHHhCCCc
Q 032621           86 CQSGARSLHATADLLGAGF-KHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus        86 c~~g~ra~~~~~~l~~~G~-~~v~~l~GG~~~w~~~~~p  123 (137)
                      |++|.||..++..|.+.|| ++++.|+||+.+|.....+
T Consensus        79 C~~G~rs~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~~~  117 (122)
T cd01526          79 CRRGNDSQTAVRKLKELGLERFVRDIIGGLKAWADKVDP  117 (122)
T ss_pred             CCCCCcHHHHHHHHHHcCCccceeeecchHHHHHHHhCc
Confidence            9999999999999999999 7899999999999877554

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.89  E-value=1.3e-22  Score=127.00  Aligned_cols=91  Identities=25%  Similarity=0.404  Sum_probs=80.4

Q ss_pred             eeCHHHHHHHhhC--CCEEEecCChHHHhc--cCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           14 TVDVRAAKNLLES--GYGYLDVRTAEEFKE--GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        14 ~is~~~~~~~~~~--~~~viDvR~~~e~~~--g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      .|+++++.+.++.  +.+|||+|++.+|..  ||||||  +|+|+.           ++...+.. ++++++||+||.+|
T Consensus         1 ~i~~~~~~~~~~~~~~~~ivDvR~~~e~~~~~~hi~ga--~~ip~~-----------~~~~~~~~-~~~~~~ivv~c~~g   66 (96)
T cd01444           1 RISVDELAELLAAGEAPVLLDVRDPASYAALPDHIPGA--IHLDED-----------SLDDWLGD-LDRDRPVVVYCYHG   66 (96)
T ss_pred             CcCHHHHHHHHhcCCCcEEEECCCHHHHhcccCCCCCC--eeCCHH-----------HHHHHHhh-cCCCCCEEEEeCCC
Confidence            3688999998876  389999999999999  999999  999985           45555544 47899999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      .+|..+++.|+..||++|++|+||+.+|.
T Consensus        67 ~~s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          67 NSSAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             ChHHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            99999999999999999999999999995

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.89  E-value=1.3e-22  Score=132.40  Aligned_cols=105  Identities=25%  Similarity=0.272  Sum_probs=86.8

Q ss_pred             eCHHHHHHHhhC-CCEEEecCCh-------HHHhccCCCCceeeCccccccCC-----CCCCC-ChHHHHHHHhh-ccCC
Q 032621           15 VDVRAAKNLLES-GYGYLDVRTA-------EEFKEGHVDAAKIFNIPYMFNTP-----EGRVK-NPDFLKKVRSL-CKEE   79 (137)
Q Consensus        15 is~~~~~~~~~~-~~~viDvR~~-------~e~~~g~ipga~~inip~~~~~~-----~~~~~-~~~~~~~~~~~-~~~~   79 (137)
                      ++++++.+++++ +.+|||+|++       .+|..||||||  +|+|+..+..     .+.+. ..++.+.+... ++++
T Consensus         2 i~~~~l~~~l~~~~~~ivDvR~~~~~~~~~~~~~~ghI~ga--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
T cd01448           2 VSPDWLAEHLDDPDVRILDARWYLPDRDGRKEYLEGHIPGA--VFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISND   79 (122)
T ss_pred             cCHHHHHHHhCCCCeEEEEeecCCCCCchhhHHhhCCCCCC--EEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCCC
Confidence            688999999887 4789999999       99999999999  9999865422     22232 34566666554 6789


Q ss_pred             CcEEEEeCC-CchHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           80 DRLVVGCQS-GARSLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        80 ~~iv~~c~~-g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      ++||+||++ |.+|..+++.|+..||++|++|+||+.+|.+.|
T Consensus        80 ~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  122 (122)
T cd01448          80 DTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG  122 (122)
T ss_pred             CEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhCc
Confidence            999999999 589999999999999999999999999998754

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.89  E-value=9.4e-23  Score=132.46  Aligned_cols=103  Identities=27%  Similarity=0.377  Sum_probs=86.1

Q ss_pred             eCHHHHHHHhhC--CCEEEecCChHHHh-ccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCch
Q 032621           15 VDVRAAKNLLES--GYGYLDVRTAEEFK-EGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGAR   91 (137)
Q Consensus        15 is~~~~~~~~~~--~~~viDvR~~~e~~-~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~r   91 (137)
                      ||++++.+++++  +.+|||||++.||. .||||||  +|+|+..+...  .....+...+....+++++||+||++|.+
T Consensus         1 is~~el~~~l~~~~~~~vIDvR~~~e~~~~ghIpgA--~~ip~~~~~~~--~~~~~~~~~l~~~~~~~~~ivv~C~~G~r   76 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVRTEAEWKFVGGVPDA--VHVAWQVYPDM--EINPNFLAELEEKVGKDRPVLLLCRSGNR   76 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECCCHHHHhcccCCCCc--eecchhhcccc--ccCHHHHHHHHhhCCCCCeEEEEcCCCcc
Confidence            578999999977  48899999999999 9999999  99998654221  11235666666555788999999999999


Q ss_pred             HHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           92 SLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      |..++..|...||++++.+.||+.+|....
T Consensus        77 s~~aa~~L~~~G~~~v~~l~gG~~~~~~~~  106 (117)
T cd01522          77 SIAAAEAAAQAGFTNVYNVLEGFEGDLDAA  106 (117)
T ss_pred             HHHHHHHHHHCCCCeEEECcCceecCCCCC
Confidence            999999999999999999999999997653

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.89  E-value=1.7e-22  Score=131.05  Aligned_cols=103  Identities=26%  Similarity=0.439  Sum_probs=83.3

Q ss_pred             eCHHHHHHHhhCC-CEEEecCChHHHhc-----------cCCCCceeeCccccccCC-CCCCCC-hHHHHHHHhh-ccCC
Q 032621           15 VDVRAAKNLLESG-YGYLDVRTAEEFKE-----------GHVDAAKIFNIPYMFNTP-EGRVKN-PDFLKKVRSL-CKEE   79 (137)
Q Consensus        15 is~~~~~~~~~~~-~~viDvR~~~e~~~-----------g~ipga~~inip~~~~~~-~~~~~~-~~~~~~~~~~-~~~~   79 (137)
                      ++++++.++++.+ .+|||+|+..||..           ||||||  +|+|+..+.. ...+.. .++.+.+... ++++
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGA--VNIPWTSLLDEDGTFKSPEELRALFAALGITPD   78 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCC--cccChHHhcCCCCCcCCHHHHHHHHHHcCCCCC
Confidence            4788898888654 89999999999987           999999  9999865422 122222 3444555554 6789


Q ss_pred             CcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh
Q 032621           80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      ++||+||++|.+|..+++.|+.+||+++++|+||+.+|.+
T Consensus        79 ~~iv~yc~~g~~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          79 KPVIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             CCEEEECCcHHHHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            9999999999999999999999999999999999999963

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.88  E-value=1.7e-22  Score=127.88  Aligned_cols=101  Identities=30%  Similarity=0.433  Sum_probs=78.3

Q ss_pred             eCHHHHHHHhhC-CCEEEecCChHHH-hccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchH
Q 032621           15 VDVRAAKNLLES-GYGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS   92 (137)
Q Consensus        15 is~~~~~~~~~~-~~~viDvR~~~e~-~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra   92 (137)
                      |+++++.+.+++ +.+|||+|++.+| ..||||||  +|+|+..+....... ..+   ....++++++||+||++|.+|
T Consensus         1 is~~el~~~~~~~~~~iiDvR~~~~~~~~ghIpga--~~ip~~~~~~~~~~~-~~~---~~~~~~~~~~ivv~c~~g~~s   74 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVRDPRELERTGMIPGA--FHAPRGMLEFWADPD-SPY---HKPAFAEDKPFVFYCASGWRS   74 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECCCHHHHHhcCCCCCc--EEcccchhhhhcCcc-ccc---cccCCCCCCeEEEEcCCCCcH
Confidence            578899998875 4889999999998 57999999  999975332110000 000   011257889999999999999


Q ss_pred             HHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           93 LHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      ..+++.|...||++|+.|+||+.+|...|
T Consensus        75 ~~~~~~l~~~G~~~v~~l~Gg~~~w~~~g  103 (103)
T cd01447          75 ALAGKTLQDMGLKPVYNIEGGFKDWKEAG  103 (103)
T ss_pred             HHHHHHHHHcChHHhEeecCcHHHHhhcC
Confidence            99999999999999999999999997653

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.88  E-value=2.4e-22  Score=131.32  Aligned_cols=94  Identities=19%  Similarity=0.302  Sum_probs=78.6

Q ss_pred             eeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh----h-ccCCC
Q 032621           13 ITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS----L-CKEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~----~-~~~~~   80 (137)
                      ..|+++++.+++.+       +.+|||||++.||..||||||  +|+|..          ..+...+..    . +++++
T Consensus         2 ~~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghI~gA--~~ip~~----------~~l~~~~~~~~~~~~~~~~~   69 (121)
T cd01530           2 KRISPETLARLLQGKYDNFFDKYIIIDCRFPYEYNGGHIKGA--VNLSTK----------DELEEFFLDKPGVASKKKRR   69 (121)
T ss_pred             CccCHHHHHHHHhcccccCCCCEEEEECCCHHHHhCCcCCCC--EeCCcH----------HHHHHHHHHhhcccccCCCC
Confidence            46899999999875       368999999999999999999  999984          123333322    1 57889


Q ss_pred             cEEEEeC-CCchHHHHHHHHHHC------------CccceeeccccHHHHH
Q 032621           81 RLVVGCQ-SGARSLHATADLLGA------------GFKHVSNFGGGHMAWV  118 (137)
Q Consensus        81 ~iv~~c~-~g~ra~~~~~~l~~~------------G~~~v~~l~GG~~~w~  118 (137)
                      +||+||. +|.||..+++.|+..            ||.+|++|+||+.+|.
T Consensus        70 ~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          70 VLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             EEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            9999997 999999999999985            9999999999999983

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.88  E-value=2.7e-22  Score=127.58  Aligned_cols=100  Identities=21%  Similarity=0.361  Sum_probs=77.6

Q ss_pred             eCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCC-CCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           15 VDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-GRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        15 is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      ||++++.+++++   +.+|||||++.||..||||||  +|+|+..+... ..+..-....++..  ..+++||+||.+|.
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~vv~~c~~g~   76 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIRSSPDFRRGHIEGS--INIPFSSVFLKEGELEQLPTVPRLEN--YKGKIIVIVSHSHK   76 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECCCHHHHhCCccCCC--EeCCHHHhcccccccccccchHHHHh--hcCCeEEEEeCCCc
Confidence            688999999976   368999999999999999999  99998643211 11100001122222  24788999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                      +|..+++.|...||++|++|+||+.+|+
T Consensus        77 ~s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          77 HAALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             cHHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            9999999999999999999999999994

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.88  E-value=4.3e-22  Score=152.15  Aligned_cols=104  Identities=28%  Similarity=0.458  Sum_probs=92.7

Q ss_pred             eeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCc
Q 032621           12 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGA   90 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~   90 (137)
                      ++.|+++++.+.++++.+|||||++.||..||||||  +|+|+.           .+...+... ++++++||+||++|.
T Consensus         2 v~~is~~el~~~l~~~~~ivDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~~~~~~~~IvvyC~~G~   68 (376)
T PRK08762          2 IREISPAEARARAAQGAVLIDVREAHERASGQAEGA--LRIPRG-----------FLELRIETHLPDRDREIVLICASGT   68 (376)
T ss_pred             CceeCHHHHHHHHhCCCEEEECCCHHHHhCCcCCCC--EECCHH-----------HHHHHHhhhcCCCCCeEEEEcCCCc
Confidence            568999999999988899999999999999999999  999984           445555544 478899999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ||..+++.|+..||++|++|+||+.+|.+.++|+++..
T Consensus        69 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  106 (376)
T PRK08762         69 RSAHAAATLRELGYTRVASVAGGFSAWKDAGLPLERPR  106 (376)
T ss_pred             HHHHHHHHHHHcCCCceEeecCcHHHHHhcCCcccccc
Confidence            99999999999999999999999999999999988654

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.88  E-value=6.2e-22  Score=133.04  Aligned_cols=97  Identities=26%  Similarity=0.416  Sum_probs=82.8

Q ss_pred             HHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHH
Q 032621           20 AKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATA   97 (137)
Q Consensus        20 ~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~   97 (137)
                      +.+++..+  .+|||||+..+|..||||||  +|+|..           .+...+..+ +++.+||+||.+|.+|..+++
T Consensus         2 l~~~l~~~~~~~ivDvR~~~e~~~gHIpgA--i~~~~~-----------~l~~~l~~l-~~~~~vVv~c~~g~~a~~aa~   67 (145)
T cd01535           2 LAAWLGEGGQTAVVDVTASANYVKRHIPGA--WWVLRA-----------QLAQALEKL-PAAERYVLTCGSSLLARFAAA   67 (145)
T ss_pred             hHHHHhCCCCeEEEECCCHHHHHcCCCCCc--eeCCHH-----------HHHHHHHhc-CCCCCEEEEeCCChHHHHHHH
Confidence            34555544  69999999999999999999  888773           566666654 678899999999999999999


Q ss_pred             HHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621           98 DLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        98 ~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                      .|+..|+.+|++|+||+.+|...|+|++++..+
T Consensus        68 ~L~~~G~~~v~~L~GG~~aW~~~g~pl~~~~~~  100 (145)
T cd01535          68 DLAALTVKPVFVLEGGTAAWIAAGLPVESGETR  100 (145)
T ss_pred             HHHHcCCcCeEEecCcHHHHHHCCCCcccCCCC
Confidence            999999999999999999999999999876443

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.87  E-value=8.8e-22  Score=122.87  Aligned_cols=95  Identities=33%  Similarity=0.469  Sum_probs=75.9

Q ss_pred             CCEEEecCChHHHhccCCCCceeeCccccccCCCCC-CCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCc
Q 032621           27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR-VKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGF  104 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~  104 (137)
                      +.+|||+|+..+|..+|||||  +|+|+..+..... .....+....... +.++++||+||.+|.++..+++.|++.|+
T Consensus         4 ~~~ivDvR~~~e~~~~hi~ga--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~   81 (100)
T smart00450        4 KVVLLDVRSPEEYEGGHIPGA--VNIPLSELLDRRGELDILEFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGF   81 (100)
T ss_pred             CEEEEECCCHHHhccCCCCCc--eeCCHHHhccCCCCcCHHHHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCC
Confidence            478999999999999999999  9999865432221 1111233333333 67889999999999999999999999999


Q ss_pred             cceeeccccHHHHHhCCCc
Q 032621          105 KHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus       105 ~~v~~l~GG~~~w~~~~~p  123 (137)
                      ++|++|+||+.+|.+.+.|
T Consensus        82 ~~v~~l~GG~~~w~~~~~~  100 (100)
T smart00450       82 KNVYLLDGGYKEWSAAGPP  100 (100)
T ss_pred             CceEEecCCHHHHHhcCCC
Confidence            9999999999999887754

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.87  E-value=7.7e-22  Score=126.25  Aligned_cols=102  Identities=32%  Similarity=0.507  Sum_probs=78.0

Q ss_pred             CHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCC-ChHHHHHHHhh---ccCCCcEEEEeCCCc
Q 032621           16 DVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSL---CKEEDRLVVGCQSGA   90 (137)
Q Consensus        16 s~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~iv~~c~~g~   90 (137)
                      |++++.+.+++ +.+|||+|+..+|..||||||  +|+|+..+....... ...+...+...   +++++.||+||.+|.
T Consensus         1 s~~el~~~l~~~~~~liD~R~~~~~~~~hI~ga--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~yc~~~~   78 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVRSPEEYERGHIPGA--VNIPFPSLDPDEPSLSEDKLDEFLKELGKKIDKDKDIVFYCSSGW   78 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEESSHHHHHHSBETTE--EEEEGGGGSSSSSBCHHHHHHHHHHHHTHGSTTTSEEEEEESSSC
T ss_pred             CHHHHHhhhhCCCeEEEEeCCHHHHHcCCCCCC--ccccccccccccccccccccccccccccccccccccceeeeeccc
Confidence            68999999943 489999999999999999999  999986552222211 11222222222   678889999999999


Q ss_pred             hHHHHHHH-----HHHCCccceeeccccHHHHHh
Q 032621           91 RSLHATAD-----LLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        91 ra~~~~~~-----l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      ++..++..     |..+|+++|++|+||+.+|.+
T Consensus        79 ~~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~  112 (113)
T PF00581_consen   79 RSGSAAAARVAWILKKLGFKNVYILDGGFEAWKA  112 (113)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHcCCCCEEEecChHHHHhc
Confidence            88777776     888999999999999999975

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.86  E-value=4.3e-21  Score=141.58  Aligned_cols=114  Identities=20%  Similarity=0.260  Sum_probs=93.4

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCC----------hHHHhccCCCCceeeCccccccCC-C----CCC-CChHHHHHHHhh
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRT----------AEEFKEGHVDAAKIFNIPYMFNTP-E----GRV-KNPDFLKKVRSL   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~----------~~e~~~g~ipga~~inip~~~~~~-~----~~~-~~~~~~~~~~~~   75 (137)
                      ..++++++.+.++++ .+|||+|+          +.+|..||||||  +|+|+..+.. .    ..+ ...+|.+.+.++
T Consensus         5 ~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T PRK11493          5 WFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGA--VFFDIEALSDHTSPLPHMMPRPETFAVAMREL   82 (281)
T ss_pred             cccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCC--EEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence            569999999999764 88999996          688999999999  8888754321 1    122 234666677766


Q ss_pred             -ccCCCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           76 -CKEEDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        76 -~~~~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                       ++++++||+||.++. .+.++++.|..+||++|++|+||+.+|.+.++|+++..
T Consensus        83 Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  137 (281)
T PRK11493         83 GVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGA  137 (281)
T ss_pred             CCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcCCCccCCC
Confidence             889999999999877 47788899999999999999999999999999988764

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.86  E-value=3.9e-21  Score=128.17  Aligned_cols=102  Identities=21%  Similarity=0.324  Sum_probs=83.4

Q ss_pred             eCHHHHHHHhh-----CCCEEEecCCh--------HHHhc------------cCCCCceeeCcccccc-CCCC----CCC
Q 032621           15 VDVRAAKNLLE-----SGYGYLDVRTA--------EEFKE------------GHVDAAKIFNIPYMFN-TPEG----RVK   64 (137)
Q Consensus        15 is~~~~~~~~~-----~~~~viDvR~~--------~e~~~------------g~ipga~~inip~~~~-~~~~----~~~   64 (137)
                      +|++++.+.++     .+++|||+|..        .+|..            ||||||  +|+|+..+ ....    .+.
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgA--v~~~~~~~~~~~~~~~~~~p   78 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGA--SFFDFEECLDEAGFEESMEP   78 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCC--EeeCHHHhhCcCCCCCCCCC
Confidence            57899999987     24899999987        88988            999999  88887543 2222    122


Q ss_pred             -ChHHHHHHHhh-ccCCCcEEEEeCC---CchHHHHHHHHHHCCccceeeccccHHHHH
Q 032621           65 -NPDFLKKVRSL-CKEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        65 -~~~~~~~~~~~-~~~~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~  118 (137)
                       ..+|.+.+... ++++++||+||++   |.+|.++++.|+.+|+++|++|+||+.+|.
T Consensus        79 ~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          79 SEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             CHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence             23677777777 8899999999986   789999999999999999999999999995

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>PRK01415 hypothetical protein; Validated

Probab=99.86  E-value=3.4e-21  Score=138.82  Aligned_cols=101  Identities=17%  Similarity=0.255  Sum_probs=84.3

Q ss_pred             ceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh--hccCCCcEEEEeC
Q 032621           11 EVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS--LCKEEDRLVVGCQ   87 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~~c~   87 (137)
                      .-..|+++++.++++++ .+|||||++.||..||||||  +|+|...+.        ++..++..  .++++++|++||.
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVRn~~E~~~Ghi~gA--inip~~~f~--------e~~~~~~~~~~~~k~k~Iv~yCt  179 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTRNDYEVEVGTFKSA--INPNTKTFK--------QFPAWVQQNQELLKGKKIAMVCT  179 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECCCHHHHhcCCcCCC--CCCChHHHh--------hhHHHHhhhhhhcCCCeEEEECC
Confidence            34789999999999864 89999999999999999999  999985321        22222211  1478899999999


Q ss_pred             CCchHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           88 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      +|.||..++..|++.||++|+.|.||+.+|.+..
T Consensus       180 gGiRs~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~~  213 (247)
T PRK01415        180 GGIRCEKSTSLLKSIGYDEVYHLKGGILQYLEDT  213 (247)
T ss_pred             CChHHHHHHHHHHHcCCCcEEEechHHHHHHHhc
Confidence            9999999999999999999999999999998753

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.85  E-value=7.8e-21  Score=142.46  Aligned_cols=114  Identities=19%  Similarity=0.199  Sum_probs=92.8

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecC--------C-hHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHHHHhh-
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVR--------T-AEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKKVRSL-   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR--------~-~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~~~~~-   75 (137)
                      ..|+++++.+.+++. .+|||+|        + ..+|..||||||  +|+++..+...     ..+ ....|.+.+.++ 
T Consensus        22 ~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgA--i~i~~~~~~~~~~~~~~~lp~~~~~~~~l~~~G   99 (320)
T PLN02723         22 PVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGA--LFFDLDGISDRTTDLPHMLPSEEAFAAAVSALG   99 (320)
T ss_pred             ceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCC--eecCHHHhcCCCCCcCCCCCCHHHHHHHHHHcC
Confidence            589999999999764 8899996        3 378999999999  88876544221     112 235677777777 


Q ss_pred             ccCCCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           76 CKEEDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        76 ~~~~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      +.++++||+||..|. .+.++++.|+.+||++|++|+||+.+|..+|+|+++..
T Consensus       100 i~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G~pv~~~~  153 (320)
T PLN02723        100 IENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSA  153 (320)
T ss_pred             CCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcCCCcccCC
Confidence            889999999999876 56788899999999999999999999999999998753

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.85  E-value=8.3e-21  Score=142.31  Aligned_cols=113  Identities=17%  Similarity=0.317  Sum_probs=92.3

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHH-----------hccCCCCceeeCcccccc-CCCCCCC-ChHHHHHHHhh-cc
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFN-TPEGRVK-NPDFLKKVRSL-CK   77 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~-----------~~g~ipga~~inip~~~~-~~~~~~~-~~~~~~~~~~~-~~   77 (137)
                      ..++.+++.+.++.+ .+|||+|++.+|           ..||||||  +|+|+..+ +..+.+. ..++.+.+.+. ++
T Consensus       190 ~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgA--vnip~~~~~~~~~~~~~~~el~~~~~~~gi~  267 (320)
T PLN02723        190 LVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGS--KCVPFPQMLDSSQTLLPAEELKKRFEQEGIS  267 (320)
T ss_pred             ceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCC--cccCHHHhcCCCCCCCCHHHHHHHHHhcCCC
Confidence            347889999888754 789999999888           46999999  99998654 3334443 34555556555 78


Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceecC
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKAR  127 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~~  127 (137)
                      ++++||+||++|.||..+++.|+.+||++|++|+||+.+|.+. .+|++++
T Consensus       268 ~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v~~YdGs~~eW~~~~~~Pv~~~  318 (320)
T PLN02723        268 LDSPIVASCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGALPDTPVATS  318 (320)
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHHcCCCCeeEeCCCHHHHhcCCCCCccCC
Confidence            8999999999999999999999999999999999999999876 6787764

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.85  E-value=8.6e-21  Score=152.06  Aligned_cols=114  Identities=16%  Similarity=0.200  Sum_probs=96.1

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccC-----CCCCCC-ChHHHHHHHhh-ccCCCcEEE
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-----PEGRVK-NPDFLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~-----~~~~~~-~~~~~~~~~~~-~~~~~~iv~   84 (137)
                      ..|+++++.++++++ .+|||+|+..+|..||||||  +|+++....     ..+.+. ..+|.+.+.++ ++++++||+
T Consensus         9 ~lIs~~eL~~~l~~~~vvIIDvR~~~eY~~GHIPGA--v~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lGI~~d~~VVv   86 (610)
T PRK09629          9 LVIEPNDLLERLDAPELILVDLTSSARYEAGHIRGA--RFVDPKRTQLGKPPAPGLLPDTADLEQLFGELGHNPDAVYVV   86 (610)
T ss_pred             ceecHHHHHHHhcCCCEEEEECCChHHHHhCCCCCc--EEcChhHhhccCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEE
Confidence            579999999999874 88999999999999999999  888864321     112333 24677777777 889999999


Q ss_pred             EeCCC-chHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           85 GCQSG-ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        85 ~c~~g-~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ||++| .+|.+++|.|+.+|+++|++|+||+.+|..+|+|+++..
T Consensus        87 Yd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag~p~~~~~  131 (610)
T PRK09629         87 YDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDV  131 (610)
T ss_pred             ECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcCCccccCC
Confidence            99977 589999999999999999999999999999999988764

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.85  E-value=2.8e-21  Score=121.19  Aligned_cols=84  Identities=30%  Similarity=0.459  Sum_probs=68.9

Q ss_pred             CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccc
Q 032621           27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH  106 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~  106 (137)
                      +.+|||||++.+|..||||||  +|+|+..+..     .....+.+.. ++++++||+||++|.+|..++++|+..||++
T Consensus        12 ~~~iiDvR~~~~~~~~hIpgA--~~ip~~~~~~-----~~~~~~~~~~-~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~~   83 (96)
T cd01529          12 GTALLDVRAEDEYAAGHLPGK--RSIPGAALVL-----RSQELQALEA-PGRATRYVLTCDGSLLARFAAQELLALGGKP   83 (96)
T ss_pred             CeEEEeCCCHHHHcCCCCCCc--EeCCHHHhcC-----CHHHHHHhhc-CCCCCCEEEEeCChHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999  9999853321     1122222222 4778899999999999999999999999999


Q ss_pred             eeeccccHHHHH
Q 032621          107 VSNFGGGHMAWV  118 (137)
Q Consensus       107 v~~l~GG~~~w~  118 (137)
                      |++|+||+.+|.
T Consensus        84 v~~l~GG~~~W~   95 (96)
T cd01529          84 VALLDGGTSAWV   95 (96)
T ss_pred             EEEeCCCHHHhc
Confidence            999999999995

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.85  E-value=1e-20  Score=139.61  Aligned_cols=113  Identities=19%  Similarity=0.302  Sum_probs=90.5

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHh-----------ccCCCCceeeCccccccCCCCCCCC-hHHHHHHHhh-ccC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNTPEGRVKN-PDFLKKVRSL-CKE   78 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~-----------~g~ipga~~inip~~~~~~~~~~~~-~~~~~~~~~~-~~~   78 (137)
                      ...+.+++...++.+ .+|||+|+..||.           .||||||  +|+|+..+...+.+.. .++...+... +++
T Consensus       153 ~~~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA--~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~  230 (281)
T PRK11493        153 AVVRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGVSF  230 (281)
T ss_pred             ceecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCc--CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCC
Confidence            345667777666553 7899999999984           6999999  9999876644334433 3444455444 788


Q ss_pred             CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 032621           79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR  127 (137)
Q Consensus        79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~  127 (137)
                      +++||+||++|.||..++..|+.+||++|++|+||+.+|.. .++|++++
T Consensus       231 ~~~ii~yC~~G~~A~~~~~~l~~~G~~~v~~y~Gs~~eW~~~~~~P~~~~  280 (281)
T PRK11493        231 DRPIIASCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEPA  280 (281)
T ss_pred             CCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCCHHHHccCCCCCcCCC
Confidence            99999999999999999999999999999999999999988 58998754

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.84  E-value=9.3e-21  Score=118.09  Aligned_cols=80  Identities=23%  Similarity=0.349  Sum_probs=66.5

Q ss_pred             CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHH-HHHhhccCCCcEEEEeCCCch--HHHHHHHHHHCC
Q 032621           27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK-KVRSLCKEEDRLVVGCQSGAR--SLHATADLLGAG  103 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iv~~c~~g~r--a~~~~~~l~~~G  103 (137)
                      +.+|||+|++.||..+|||||  +|+|..           .+.. ......+++++||+||.+|.+  |..+++.|...|
T Consensus        10 ~~~liDvR~~~e~~~~hi~ga--~~ip~~-----------~~~~~~~~~~~~~~~~ivl~c~~G~~~~s~~aa~~L~~~G   76 (92)
T cd01532          10 EIALIDVREEDPFAQSHPLWA--ANLPLS-----------RLELDAWVRIPRRDTPIVVYGEGGGEDLAPRAARRLSELG   76 (92)
T ss_pred             CeEEEECCCHHHHhhCCcccC--eeCCHH-----------HHHhhhHhhCCCCCCeEEEEeCCCCchHHHHHHHHHHHcC
Confidence            488999999999999999999  999985           3322 222223458899999999986  689999999999


Q ss_pred             ccceeeccccHHHHHh
Q 032621          104 FKHVSNFGGGHMAWVQ  119 (137)
Q Consensus       104 ~~~v~~l~GG~~~w~~  119 (137)
                      |++|++|+||+.+|.+
T Consensus        77 ~~~v~~l~GG~~~W~~   92 (92)
T cd01532          77 YTDVALLEGGLQGWRA   92 (92)
T ss_pred             ccCEEEccCCHHHHcC
Confidence            9999999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.84  E-value=1.2e-20  Score=137.32  Aligned_cols=100  Identities=24%  Similarity=0.334  Sum_probs=82.4

Q ss_pred             ceeeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCc
Q 032621           11 EVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDR   81 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   81 (137)
                      ....++++++.++++++       .+|||||++.||+.||||||  +|+|+..+.        ++..++...  ..++++
T Consensus       108 ~~~~is~~el~~~l~~~~~~~~~~~vlIDVR~~~E~~~Ghi~GA--iniPl~~f~--------~~~~~l~~~~~~~kdk~  177 (257)
T PRK05320        108 RAPSVDAATLKRWLDQGHDDAGRPVVMLDTRNAFEVDVGTFDGA--LDYRIDKFT--------EFPEALAAHRADLAGKT  177 (257)
T ss_pred             cCceeCHHHHHHHHhccccccCCCeEEEECCCHHHHccCccCCC--EeCChhHhh--------hhHHHHHhhhhhcCCCe
Confidence            35789999999988652       68999999999999999999  999995321        222223222  127889


Q ss_pred             EEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           82 LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      |++||.+|.||..++.+|++.||++|+.|.||+.+|.+.
T Consensus       178 IvvyC~~G~Rs~~Aa~~L~~~Gf~~V~~L~GGi~~w~~~  216 (257)
T PRK05320        178 VVSFCTGGIRCEKAAIHMQEVGIDNVYQLEGGILKYFEE  216 (257)
T ss_pred             EEEECCCCHHHHHHHHHHHHcCCcceEEeccCHHHHHHh
Confidence            999999999999999999999999999999999999864

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.84  E-value=1.6e-20  Score=118.95  Aligned_cols=79  Identities=27%  Similarity=0.481  Sum_probs=69.1

Q ss_pred             CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621           27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFK  105 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~  105 (137)
                      ...+||+|+++||..||||||  +|+|+.           ++...+.+. .+++++||+||.+|.||..++..|.++||+
T Consensus        18 ~~~lIDvR~~~ef~~ghIpgA--inip~~-----------~l~~~l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~   84 (101)
T TIGR02981        18 AEHWIDVRIPEQYQQEHIQGA--INIPLK-----------EIKEHIATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYT   84 (101)
T ss_pred             CCEEEECCCHHHHhcCCCCCC--EECCHH-----------HHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCC
Confidence            368999999999999999999  999995           566666555 456778999999999999999999999999


Q ss_pred             ceeeccccHHHHHh
Q 032621          106 HVSNFGGGHMAWVQ  119 (137)
Q Consensus       106 ~v~~l~GG~~~w~~  119 (137)
                      +++.+ ||+.+|..
T Consensus        85 ~v~~~-GG~~~~~~   97 (101)
T TIGR02981        85 HAENA-GGIKDIAM   97 (101)
T ss_pred             eEEec-CCHHHhhh
Confidence            99885 99999964

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=1.1e-20  Score=121.82  Aligned_cols=97  Identities=23%  Similarity=0.400  Sum_probs=75.4

Q ss_pred             eeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEeC
Q 032621           13 ITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQ   87 (137)
Q Consensus        13 ~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~   87 (137)
                      +.|+++++.+++..+   .+|||||+. ||..||||||  +|+|+..+..        ....+...  .+++++||+||.
T Consensus         2 ~~is~~~l~~~~~~~~~~~~iiDvR~~-e~~~~hi~gA--~~ip~~~l~~--------~~~~~~~~~~~~~~~~iv~yC~   70 (113)
T cd01531           2 SYISPAQLKGWIRNGRPPFQVVDVRDE-DYAGGHIKGS--WHYPSTRFKA--------QLNQLVQLLSGSKKDTVVFHCA   70 (113)
T ss_pred             CcCCHHHHHHHHHcCCCCEEEEEcCCc-ccCCCcCCCC--EecCHHHHhh--------CHHHHHHHHhcCCCCeEEEEee
Confidence            578999999998763   679999999 9999999999  9999853211        11222221  256789999998


Q ss_pred             -CCchHHHHHHHHHH--------CCccceeeccccHHHHHhC
Q 032621           88 -SGARSLHATADLLG--------AGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        88 -~g~ra~~~~~~l~~--------~G~~~v~~l~GG~~~w~~~  120 (137)
                       +|.|+..++..|.+        .|+.+|++|+||+.+|.+.
T Consensus        71 ~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~  112 (113)
T cd01531          71 LSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS  112 (113)
T ss_pred             cCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence             67888888877654        4999999999999999753

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.83  E-value=2.2e-20  Score=118.76  Aligned_cols=78  Identities=27%  Similarity=0.490  Sum_probs=68.6

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccc
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKH  106 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~  106 (137)
                      -.|||+|++.||..+|||||  +|+|+.           ++...+... .+++++||+||++|.||..++..|.+.||++
T Consensus        21 ~~lIDvR~~~ef~~ghIpGA--iniP~~-----------~l~~~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~   87 (104)
T PRK10287         21 EHWIDVRVPEQYQQEHVQGA--INIPLK-----------EVKERIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTH   87 (104)
T ss_pred             CEEEECCCHHHHhcCCCCcc--EECCHH-----------HHHHHHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCe
Confidence            57999999999999999999  999985           566666665 4567789999999999999999999999999


Q ss_pred             eeeccccHHHHHh
Q 032621          107 VSNFGGGHMAWVQ  119 (137)
Q Consensus       107 v~~l~GG~~~w~~  119 (137)
                      ++. .||+.+|..
T Consensus        88 v~~-~GG~~~~~~   99 (104)
T PRK10287         88 AEN-AGGLKDIAM   99 (104)
T ss_pred             EEe-cCCHHHHhh
Confidence            977 699999964

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.83  E-value=2.8e-20  Score=138.90  Aligned_cols=101  Identities=23%  Similarity=0.364  Sum_probs=84.1

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh-h-ccCCCcEEEEe
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS-L-CKEEDRLVVGC   86 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~iv~~c   86 (137)
                      .....++++++.++++++ .+|||||++.||..||||||  +|+|+..+.        ++..++.+ . ..++++||+||
T Consensus       109 ~~~~~is~~el~~~l~~~~~vlIDVR~~~E~~~GhI~GA--i~ip~~~~~--------~~~~~l~~~~~~~kdk~IvvyC  178 (314)
T PRK00142        109 NVGTYLKPKEVNELLDDPDVVFIDMRNDYEYEIGHFENA--IEPDIETFR--------EFPPWVEENLDPLKDKKVVMYC  178 (314)
T ss_pred             cCCcccCHHHHHHHhcCCCeEEEECCCHHHHhcCcCCCC--EeCCHHHhh--------hhHHHHHHhcCCCCcCeEEEEC
Confidence            345689999999988764 89999999999999999999  999986331        22223322 1 35889999999


Q ss_pred             CCCchHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           87 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        87 ~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      .+|.||..++.+|+..||++|+.|+||+.+|...
T Consensus       179 ~~G~Rs~~aa~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        179 TGGIRCEKASAWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             CCCcHHHHHHHHHHHcCCCcEEEecchHHHHHHh
Confidence            9999999999999999999999999999999764

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.83  E-value=5.5e-20  Score=117.43  Aligned_cols=87  Identities=40%  Similarity=0.565  Sum_probs=75.1

Q ss_pred             CCEEEecCChHHHhccCCCC-ceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCc
Q 032621           27 GYGYLDVRTAEEFKEGHVDA-AKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGF  104 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipg-a~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~  104 (137)
                      +.+|||||++.||..+|||+ +  +|+|...+.           ...... .+++++|++||.+|.||..++..|++.||
T Consensus        20 ~~~liDvR~~~e~~~~~i~~~~--~~ip~~~~~-----------~~~~~~~~~~~~~ivv~C~~G~rS~~aa~~L~~~G~   86 (110)
T COG0607          20 DAVLLDVREPEEYERGHIPGAA--INIPLSELK-----------AAENLLELPDDDPIVVYCASGVRSAAAAAALKLAGF   86 (110)
T ss_pred             CCEEEeccChhHhhhcCCCcce--eeeecccch-----------hhhcccccCCCCeEEEEeCCCCChHHHHHHHHHcCC
Confidence            58999999999999999999 8  999996332           211111 47899999999999999999999999999


Q ss_pred             cceeeccccHHHHHhCCCceec
Q 032621          105 KHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus       105 ~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      ++++.+.||+.+|...++|+..
T Consensus        87 ~~~~~l~gG~~~w~~~~~~~~~  108 (110)
T COG0607          87 TNVYNLDGGIDAWKGAGLPLVR  108 (110)
T ss_pred             ccccccCCcHHHHHhcCCCccc
Confidence            9888999999999999998765

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.83  E-value=8.5e-20  Score=133.84  Aligned_cols=117  Identities=24%  Similarity=0.356  Sum_probs=97.6

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhc----------cCCCCceeeCcccccc-CCCCCCCChHHHHHHHhh--
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVRSL--   75 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~----------g~ipga~~inip~~~~-~~~~~~~~~~~~~~~~~~--   75 (137)
                      .....++..+++..++.. .+|||+|++.+|..          ||||||  +|+|+..+ ++...+..++..+.+.+.  
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~liDaR~~~rf~G~~~ep~~~~~GHIPGA--iNipw~~~~~~~~~~~~~~~~~~l~~~~g  230 (285)
T COG2897         153 NVKAVVDATLVADALEVPAVLLIDARSPERFRGKEPEPRDGKAGHIPGA--INIPWTDLVDDGGLFKSPEEIARLYADAG  230 (285)
T ss_pred             CccccCCHHHHHHHhcCCCeEEEecCCHHHhCCCCCCCCCCCCCCCCCC--cCcCHHHHhcCCCccCcHHHHHHHHHhcC
Confidence            334567778888888775 77999999999988          999999  99999776 444556666677766633  


Q ss_pred             ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceecCC
Q 032621           76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKARE  128 (137)
Q Consensus        76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~~~  128 (137)
                      +++++++|+||++|.+|+..+..|+.+|+.++.+++|++..|.+. +.|++++.
T Consensus       231 i~~~~~vI~yCgsG~~As~~~~al~~lg~~~~~lYdGSWsEWg~~~~~PV~~g~  284 (285)
T COG2897         231 IDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVETGE  284 (285)
T ss_pred             CCCCCCEEEEcCCchHHHHHHHHHHHhCCCCcccccChHHHhhcCCCCccccCC
Confidence            899999999999999999999999999998889999999999887 56877653

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.83  E-value=2.6e-20  Score=120.17  Aligned_cols=92  Identities=20%  Similarity=0.322  Sum_probs=71.4

Q ss_pred             eeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-----ccCCC
Q 032621           13 ITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-----CKEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~   80 (137)
                      +.|+++++.++++++       .+|||||++ ||..||||||  +|+|+..           +...+.+.     ..+.+
T Consensus         2 ~~is~~el~~~l~~~~~~~~~~~~iiDvR~~-ef~~ghipgA--i~ip~~~-----------~~~~~~~~~~~~~~~~~~   67 (113)
T cd01443           2 KYISPEELVALLENSDSNAGKDFVVVDLRRD-DYEGGHIKGS--INLPAQS-----------CYQTLPQVYALFSLAGVK   67 (113)
T ss_pred             cccCHHHHHHHHhCCccccCCcEEEEECCch-hcCCCcccCc--eecchhH-----------HHHHHHHHHHHhhhcCCC
Confidence            478999999999874       689999999 9999999999  9999852           22222222     13567


Q ss_pred             cEEEEeCC-CchHHHHHHHHHH----CCc--cceeeccccHHHHH
Q 032621           81 RLVVGCQS-GARSLHATADLLG----AGF--KHVSNFGGGHMAWV  118 (137)
Q Consensus        81 ~iv~~c~~-g~ra~~~~~~l~~----~G~--~~v~~l~GG~~~w~  118 (137)
                      +||+||.+ |.||..++.+|..    .|+  .++++|+||+.+|.
T Consensus        68 ~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~  112 (113)
T cd01443          68 LAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY  112 (113)
T ss_pred             EEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence            89999997 6788887766543    465  68999999999995

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.83  E-value=3e-20  Score=114.07  Aligned_cols=80  Identities=36%  Similarity=0.550  Sum_probs=68.7

Q ss_pred             CCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHH-HhhccCCCcEEEEeCCCchHHHHHHHHHHCCc
Q 032621           26 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV-RSLCKEEDRLVVGCQSGARSLHATADLLGAGF  104 (137)
Q Consensus        26 ~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~  104 (137)
                      .+..|||+|+..+|..+|||||  +|+|+.           .+.... ...++++++||+||+.|.+|..+++.|++.|+
T Consensus         9 ~~~~iiD~R~~~~~~~~~i~ga--~~~~~~-----------~~~~~~~~~~~~~~~~vv~~c~~~~~a~~~~~~l~~~G~   75 (89)
T cd00158           9 EDAVLLDVREPEEYAAGHIPGA--INIPLS-----------ELEERAALLELDKDKPIVVYCRSGNRSARAAKLLRKAGG   75 (89)
T ss_pred             CCeEEEECCCHHHHhccccCCC--EecchH-----------HHhhHHHhhccCCCCeEEEEeCCCchHHHHHHHHHHhCc
Confidence            3589999999999999999999  999985           222221 22257889999999999999999999999999


Q ss_pred             cceeeccccHHHHH
Q 032621          105 KHVSNFGGGHMAWV  118 (137)
Q Consensus       105 ~~v~~l~GG~~~w~  118 (137)
                      +++++|.||+.+|.
T Consensus        76 ~~v~~l~gG~~~w~   89 (89)
T cd00158          76 TNVYNLEGGMLAWK   89 (89)
T ss_pred             ccEEEecCChhhcC
Confidence            99999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.82  E-value=1.2e-19  Score=145.49  Aligned_cols=114  Identities=18%  Similarity=0.308  Sum_probs=92.8

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHh--------ccCCCCceeeCcccccc-CCCCCCCCh-HHHHHHHhh-ccCCC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFN-TPEGRVKNP-DFLKKVRSL-CKEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~--------~g~ipga~~inip~~~~-~~~~~~~~~-~~~~~~~~~-~~~~~   80 (137)
                      ..++.+++.+.++++ .+|||+|+++||.        .||||||  +|+|+..+ +..+.+..+ ++.+.+... +++++
T Consensus       147 ~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~~~~~r~GHIPGA--vnip~~~~~~~~~~lk~~~el~~~~~~~Gi~~~~  224 (610)
T PRK09629        147 PTATREYLQSRLGAADLAIWDARAPTEYSGEKVVAAKGGHIPGA--VNFEWTAGMDKARNLRIRQDMPEILRDLGITPDK  224 (610)
T ss_pred             ccccHHHHHHhhCCCCcEEEECCCccccCCcccccccCCCCCCC--eecCHHHhcCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence            467889999988764 7899999999994        6999999  99998643 333444433 444455444 78999


Q ss_pred             cEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceecCC
Q 032621           81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKARE  128 (137)
Q Consensus        81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~~~  128 (137)
                      +||+||++|.+|..+++.|+.+||++|++|+|||.+|.+. .+|+++..
T Consensus       225 ~VVvYC~sG~rAa~~~~~L~~lG~~~V~~YdGsw~eW~~~~~lPv~~~~  273 (610)
T PRK09629        225 EVITHCQTHHRSGFTYLVAKALGYPRVKAYAGSWGEWGNHPDTPVEVPT  273 (610)
T ss_pred             CEEEECCCChHHHHHHHHHHHcCCCCcEEeCCCHHHHhCCCCCccccCC
Confidence            9999999999999999999999999999999999999876 68887653

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.81  E-value=1.5e-19  Score=138.77  Aligned_cols=102  Identities=29%  Similarity=0.398  Sum_probs=85.3

Q ss_pred             CceeeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC
Q 032621           10 AEVITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ   87 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~   87 (137)
                      .....|+++++.+.++++  .+|||||++.||..+|||||  +|+|+..+..         ...+.. ++++++||+||+
T Consensus       284 ~~~~~Is~~el~~~l~~~~~~~lIDvR~~~ef~~ghIpGA--inip~~~l~~---------~~~~~~-l~~d~~iVvyC~  351 (392)
T PRK07878        284 AAGSTITPRELKEWLDSGKKIALIDVREPVEWDIVHIPGA--QLIPKSEILS---------GEALAK-LPQDRTIVLYCK  351 (392)
T ss_pred             CCCCccCHHHHHHHHhCCCCeEEEECCCHHHHhcCCCCCC--EEcChHHhcc---------hhHHhh-CCCCCcEEEEcC
Confidence            345789999999999764  68999999999999999999  9999853210         112323 478999999999


Q ss_pred             CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCc
Q 032621           88 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus        88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p  123 (137)
                      +|.||..+++.|++.||++|++|+||+.+|.+...+
T Consensus       352 ~G~rS~~aa~~L~~~G~~~V~~L~GG~~~W~~~~~~  387 (392)
T PRK07878        352 TGVRSAEALAALKKAGFSDAVHLQGGVVAWAKQVDP  387 (392)
T ss_pred             CChHHHHHHHHHHHcCCCcEEEecCcHHHHHHhcCC
Confidence            999999999999999999999999999999876543

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.78  E-value=4.5e-18  Score=124.77  Aligned_cols=118  Identities=23%  Similarity=0.260  Sum_probs=93.8

Q ss_pred             CceeeeCHHHHHHHhhCC------CEEEecCC--hHHHhccCCCCceeeCcccccc--CC---CCCCC-ChHHHHHHHhh
Q 032621           10 AEVITVDVRAAKNLLESG------YGYLDVRT--AEEFKEGHVDAAKIFNIPYMFN--TP---EGRVK-NPDFLKKVRSL   75 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~------~~viDvR~--~~e~~~g~ipga~~inip~~~~--~~---~~~~~-~~~~~~~~~~~   75 (137)
                      .....|+++.+.+.++..      ..+++++.  ..+|..+|||||  +++++...  .+   ...+. ..+|.+.+.++
T Consensus         8 ~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~~~~Y~~~HIPGA--v~~d~~~~~~~~~~~~~~lp~~e~fa~~~~~~   85 (285)
T COG2897           8 SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDAEEYLEGHIPGA--VFFDWEADLSDPVPLPHMLPSPEQFAKLLGEL   85 (285)
T ss_pred             CcceEEcHHHHHhhccccccccCceEEEeCCcchHHHHHhccCCCC--EecCHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            456789999999998752      44555554  489999999999  66665432  22   23443 35788888888


Q ss_pred             -ccCCCcEEEEeCCC-chHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           76 -CKEEDRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        76 -~~~~~~iv~~c~~g-~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                       +..+++||+|++.+ ..|++++|.|+-+|+++|++|+||+.+|.++|+|+++...
T Consensus        86 GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g~p~~~~~~  141 (285)
T COG2897          86 GIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAGLPLETEPP  141 (285)
T ss_pred             CCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcCCCccCCCC
Confidence             99999999999764 5899999999999999999999999999999999997543

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.78  E-value=9.4e-19  Score=132.02  Aligned_cols=108  Identities=24%  Similarity=0.356  Sum_probs=81.7

Q ss_pred             CHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCC----------C---------CCCChHHHHHHHhh-
Q 032621           16 DVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE----------G---------RVKNPDFLKKVRSL-   75 (137)
Q Consensus        16 s~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~----------~---------~~~~~~~~~~~~~~-   75 (137)
                      ...++.+.+.++.+|||||++.||..||||||  +|+|+......          +         .+..+++...+.+. 
T Consensus         4 ~~~~~~~~~~~~~~lIDVRsp~Ef~~ghIpgA--iniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l~~~~~~~~   81 (345)
T PRK11784          4 DAQDFRALFLNDTPLIDVRSPIEFAEGHIPGA--INLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNIAAHREEAW   81 (345)
T ss_pred             cHHHHHHHHhCCCEEEECCCHHHHhcCCCCCe--eeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhHHHHHHHHH
Confidence            46777777777899999999999999999999  99999543210          0         11122333332221 


Q ss_pred             --c-cCCCcEEEEeC-CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           76 --C-KEEDRLVVGCQ-SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        76 --~-~~~~~iv~~c~-~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                        . .++++||+||. +|.||..++++|...||+ ++.|+||+.+|...+.+...
T Consensus        82 ~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~~-v~~L~GG~~awr~~~~~~~~  135 (345)
T PRK11784         82 ADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGID-VPRLEGGYKAYRRFVIDTLE  135 (345)
T ss_pred             HhcccCCCeEEEEECCCChHHHHHHHHHHHcCCC-cEEEcCCHHHHHHhhHHHHh
Confidence              2 37889999995 789999999999999994 99999999999987765544

>PRK07411 hypothetical protein; Validated

Probab=99.77  E-value=1.4e-18  Score=133.28  Aligned_cols=104  Identities=29%  Similarity=0.426  Sum_probs=84.1

Q ss_pred             CceeeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEe
Q 032621           10 AEVITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGC   86 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c   86 (137)
                      .....|+++++.+.++++   .+|||||++.||..||||||  +|+|+..+...      .....+.. +.++++||+||
T Consensus       279 ~~~~~Is~~el~~~l~~~~~~~vlIDVR~~~E~~~ghIpGA--iniP~~~l~~~------~~~~~l~~-l~~d~~IVvyC  349 (390)
T PRK07411        279 AEIPEMTVTELKALLDSGADDFVLIDVRNPNEYEIARIPGS--VLVPLPDIENG------PGVEKVKE-LLNGHRLIAHC  349 (390)
T ss_pred             cccCccCHHHHHHHHhCCCCCeEEEECCCHHHhccCcCCCC--EEccHHHhhcc------cchHHHhh-cCCCCeEEEEC
Confidence            345789999999998753   58999999999999999999  99998643211      01123333 36789999999


Q ss_pred             CCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCc
Q 032621           87 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus        87 ~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p  123 (137)
                      .+|.||..+++.|++.||++ +.|.||+.+|.+...|
T Consensus       350 ~~G~RS~~aa~~L~~~G~~~-~~l~GG~~~W~~~~~p  385 (390)
T PRK07411        350 KMGGRSAKALGILKEAGIEG-TNVKGGITAWSREVDP  385 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCe-EEecchHHHHHHhcCC
Confidence            99999999999999999984 5899999999887654

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.77  E-value=1.2e-18  Score=132.23  Aligned_cols=95  Identities=29%  Similarity=0.432  Sum_probs=78.6

Q ss_pred             ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh-hccCCCcEEEEeCCC
Q 032621           11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS-LCKEEDRLVVGCQSG   89 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~~c~~g   89 (137)
                      ....++++++.+.. .+.+|||||+++||..+|||||  +|+|+..           +...+.. .++++++||+||++|
T Consensus       259 ~~~~i~~~~~~~~~-~~~~IIDVR~~~ef~~ghIpgA--inip~~~-----------l~~~~~~~~~~~~~~IvvyC~~G  324 (355)
T PRK05597        259 FGEVLDVPRVSALP-DGVTLIDVREPSEFAAYSIPGA--HNVPLSA-----------IREGANPPSVSAGDEVVVYCAAG  324 (355)
T ss_pred             cccccCHHHHHhcc-CCCEEEECCCHHHHccCcCCCC--EEeCHHH-----------hhhccccccCCCCCeEEEEcCCC
Confidence            34578888888543 4589999999999999999999  9999952           2222211 246888999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHHh
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      .||..+++.|+..||++|++|+||+.+|..
T Consensus       325 ~rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~  354 (355)
T PRK05597        325 VRSAQAVAILERAGYTGMSSLDGGIEGWLD  354 (355)
T ss_pred             HHHHHHHHHHHHcCCCCEEEecCcHHHHhh
Confidence            999999999999999999999999999964

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.76  E-value=2.3e-18  Score=128.28  Aligned_cols=97  Identities=24%  Similarity=0.372  Sum_probs=72.3

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccccCCCC---CC----------------CC---hHHHHHHHhhccCCCcEEEE
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG---RV----------------KN---PDFLKKVRSLCKEEDRLVVG   85 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~---~~----------------~~---~~~~~~~~~~~~~~~~iv~~   85 (137)
                      ..|||||++.||..||||||  +|+|+.......   .+                ..   +++...+....++.+.||+|
T Consensus         3 ~~liDVRsp~Ef~~ghipgA--iniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~~~~~~vvvy   80 (311)
T TIGR03167         3 DPLIDVRSPAEFAEGHLPGA--INLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFADGPPQPLLY   80 (311)
T ss_pred             CEEEECCCHHHHhcCCCcCC--EecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhcCCCCcEEEE
Confidence            58999999999999999999  999995332110   00                01   11222332224555569999


Q ss_pred             eC-CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 032621           86 CQ-SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR  127 (137)
Q Consensus        86 c~-~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~  127 (137)
                      |. +|.||..++++|..+|| ++++|+||+.+|...+.+....
T Consensus        81 C~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~~~~~~~  122 (311)
T TIGR03167        81 CWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFVIDQLEE  122 (311)
T ss_pred             ECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhhhhhhhc
Confidence            95 78999999999999999 5999999999999888765543

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.73  E-value=2.6e-17  Score=108.80  Aligned_cols=103  Identities=22%  Similarity=0.187  Sum_probs=74.9

Q ss_pred             eeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccC---C-CC------CCCChHHHHHHHhhccCCC
Q 032621           14 TVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT---P-EG------RVKNPDFLKKVRSLCKEED   80 (137)
Q Consensus        14 ~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~---~-~~------~~~~~~~~~~~~~~~~~~~   80 (137)
                      .|+++++.+.++.   +.+|||+|+..+|..||||||  +|+|+..+.   . ..      .+..++....+...  +++
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR~~~~~~~~hI~~a--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~   76 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCRPFLEYSSSHIRGA--VNVCCPTILRRRLQGGKILLQQLLSCPEDRDRLRRG--ESL   76 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECCCHHHHhhCcccCc--EecChHHHHHHhhcccchhhhhhcCCHHHHHHHhcC--CCC
Confidence            3789999999974   479999999999999999999  888876321   0 00      12222333333332  678


Q ss_pred             cEEEEeCCCch---------HHHHHHHHHH--CCccceeeccccHHHHHhC
Q 032621           81 RLVVGCQSGAR---------SLHATADLLG--AGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        81 ~iv~~c~~g~r---------a~~~~~~l~~--~G~~~v~~l~GG~~~w~~~  120 (137)
                      +||+||.++.+         +..++..|..  .++.+|++|+||+.+|.+.
T Consensus        77 ~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~~  127 (132)
T cd01446          77 AVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSSE  127 (132)
T ss_pred             eEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHhh
Confidence            89999998765         5666666666  3667899999999999653

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.68  E-value=9.7e-17  Score=122.33  Aligned_cols=94  Identities=26%  Similarity=0.331  Sum_probs=74.3

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHhccCCC---CceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVD---AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ip---ga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      .+++++++.++++++ .+|||||++.||..||||   ||  +|||+..+...     .++...+.. +++ ++||+||.+
T Consensus       271 ~~~~~~el~~~l~~~~~~lIDVR~~~E~~~ghI~~~~gA--inIPl~~l~~~-----~~~~~~l~~-~~~-~~Ivv~C~s  341 (370)
T PRK05600        271 ARTDTTSLIDATLNGSATLLDVREPHEVLLKDLPEGGAS--LKLPLSAITDD-----ADILHALSP-IDG-DNVVVYCAS  341 (370)
T ss_pred             cccCHHHHHHHHhcCCeEEEECCCHHHhhhccCCCCCcc--EeCcHHHhhcc-----hhhhhhccc-cCC-CcEEEECCC
Confidence            478999999998875 689999999999999998   47  99998633110     011222322 233 489999999


Q ss_pred             CchHHHHHHHHHHCCccc-eeeccccHH
Q 032621           89 GARSLHATADLLGAGFKH-VSNFGGGHM  115 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~-v~~l~GG~~  115 (137)
                      |.||..++..|++.||++ |+.|.||+.
T Consensus       342 G~RS~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        342 GIRSADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             ChhHHHHHHHHHHcCCCCceEEeccccC
Confidence            999999999999999986 999999974

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=99.60  E-value=1.5e-15  Score=110.68  Aligned_cols=99  Identities=22%  Similarity=0.306  Sum_probs=83.2

Q ss_pred             eeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEeCC
Q 032621           12 VITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQS   88 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~   88 (137)
                      -..|+|+++.+++..+ .+|||.|...||+.||+.||  ++.+..++        .+|..++.+.  .-++++|+.||.+
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtRN~YE~~iG~F~gA--v~p~~~tF--------refP~~v~~~~~~~~~KkVvmyCTG  181 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTRNDYEVAIGHFEGA--VEPDIETF--------REFPAWVEENLDLLKDKKVVMYCTG  181 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcCcceeEeeeeecCc--cCCChhhh--------hhhHHHHHHHHHhccCCcEEEEcCC
Confidence            3578999999999875 99999999999999999999  88887543        2344444332  3567899999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      |.|+..+..+|...||++|+-|+||+-.|...
T Consensus       182 GIRCEKas~~m~~~GF~eVyhL~GGIl~Y~e~  213 (308)
T COG1054         182 GIRCEKASAWMKENGFKEVYHLEGGILKYLED  213 (308)
T ss_pred             ceeehhhHHHHHHhcchhhhcccchHHHHhhh
Confidence            99999999999999999999999999988654

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=99.56  E-value=1.4e-14  Score=114.07  Aligned_cols=81  Identities=15%  Similarity=0.257  Sum_probs=68.3

Q ss_pred             HHHHHHHhhCCCEEEecCChHHHhccCCCC----ceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchH
Q 032621           17 VRAAKNLLESGYGYLDVRTAEEFKEGHVDA----AKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS   92 (137)
Q Consensus        17 ~~~~~~~~~~~~~viDvR~~~e~~~g~ipg----a~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra   92 (137)
                      +.+..+.+..+.++||||+++||..+||||    |  +|+|+.           ++...+.. ++++++|++||.+|.||
T Consensus       397 ~~~~~~~~~~~~~lIDVR~~~E~~~~hI~g~~~~a--~niP~~-----------~l~~~~~~-l~~~~~iivyC~~G~rS  462 (482)
T PRK01269        397 EVETVSELPPDDVIIDIRSPDEQEDKPLKLEGVEV--KSLPFY-----------KLSTQFGD-LDQSKTYLLYCDRGVMS  462 (482)
T ss_pred             hhHHHHhcCCCCEEEECCCHHHHhcCCCCCCCceE--EECCHH-----------HHHHHHhh-cCCCCeEEEECCCCHHH
Confidence            344555556678999999999999999999    8  999995           45555544 47888999999999999


Q ss_pred             HHHHHHHHHCCccceeecc
Q 032621           93 LHATADLLGAGFKHVSNFG  111 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~  111 (137)
                      ..++..|++.||++|+++.
T Consensus       463 ~~aa~~L~~~G~~nv~~y~  481 (482)
T PRK01269        463 RLQALYLREQGFSNVKVYR  481 (482)
T ss_pred             HHHHHHHHHcCCccEEecC
Confidence            9999999999999998775

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.44  E-value=1.6e-12  Score=94.49  Aligned_cols=117  Identities=21%  Similarity=0.244  Sum_probs=92.1

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecC---------ChHHHhccCCCCceeeCcccccc---CCCCCCC-ChHHHHHHHhh-cc
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVR---------TAEEFKEGHVDAAKIFNIPYMFN---TPEGRVK-NPDFLKKVRSL-CK   77 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR---------~~~e~~~g~ipga~~inip~~~~---~~~~~~~-~~~~~~~~~~~-~~   77 (137)
                      ..+++..+.+.+.+. +.|||..         ...||..-|||||.++++..-..   ....++. ...|.+.+..+ ++
T Consensus         5 ~iv~~~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lGi~   84 (286)
T KOG1529|consen    5 SIVSVKWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLGVD   84 (286)
T ss_pred             cccChHHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcCCC
Confidence            467889999988874 8899985         44678889999995554443211   1112333 35677888777 88


Q ss_pred             CCCcEEEEeC--CCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           78 EEDRLVVGCQ--SGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        78 ~~~~iv~~c~--~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      .++.+|||++  .|. .|++++|.++.+|+++|..|+||+.+|+..++|+.....
T Consensus        85 n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g~~~~s~~~  139 (286)
T KOG1529|consen   85 NGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAGGPVDSSKV  139 (286)
T ss_pred             CCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcCCccccccc
Confidence            9999999999  676 799999999999999999999999999999999988764

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.38  E-value=1.3e-12  Score=96.60  Aligned_cols=101  Identities=19%  Similarity=0.310  Sum_probs=77.0

Q ss_pred             CCCceeeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh---cc
Q 032621            8 SGAEVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL---CK   77 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~---~~   77 (137)
                      +...++.||++.++.++...       +.|||+|-+.||..|||+||  +||...           +..+.+.-.   ..
T Consensus       151 k~~~~k~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY~GGHIkga--vnl~~~-----------~~~~~~f~~~~~~~  217 (325)
T KOG3772|consen  151 KSQDLKYISPETLKGLLQGKFSDFFDKFIIIDCRYPYEYEGGHIKGA--VNLYSK-----------ELLQDFFLLKDGVP  217 (325)
T ss_pred             ccccccccCHHHHHHHHHhccccceeeEEEEEeCCcccccCcccccc--eecccH-----------hhhhhhhccccccc
Confidence            45668899999999999762       46999999999999999999  999875           222222211   11


Q ss_pred             ---CCCcEEEEeCC-CchHHHHHHHHHH------------CCccceeeccccHHHHHhCC
Q 032621           78 ---EEDRLVVGCQS-GARSLHATADLLG------------AGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        78 ---~~~~iv~~c~~-g~ra~~~~~~l~~------------~G~~~v~~l~GG~~~w~~~~  121 (137)
                         ....+||+|-- ..|+..+|..|+.            +-|..+|+|+|||.+|...-
T Consensus       218 ~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~~  277 (325)
T KOG3772|consen  218 SGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSNY  277 (325)
T ss_pred             cccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHhc
Confidence               22457999995 5599999999983            34567999999999997654

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=99.31  E-value=3.9e-12  Score=94.67  Aligned_cols=104  Identities=28%  Similarity=0.277  Sum_probs=81.3

Q ss_pred             CceeeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEe
Q 032621           10 AEVITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGC   86 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c   86 (137)
                      ....+||+.++++.++++  .++||||++.||+..|+|.|  +|||+..+....       .++.... -..+++|+++|
T Consensus       314 ~~~~Rvsv~d~k~il~~~~~h~llDvRp~~~~eI~~lP~a--vNIPL~~l~~~~-------~~~~~~~~~~~~~~I~ViC  384 (427)
T KOG2017|consen  314 EPDERVSVTDYKRILDSGAKHLLLDVRPSHEYEICRLPEA--VNIPLKELRSRS-------GKKLQGDLNTESKDIFVIC  384 (427)
T ss_pred             ChhhcccHHHHHHHHhcCCCeEEEeccCcceEEEEecccc--cccchhhhhhhh-------hhhhcccccccCCCEEEEe
Confidence            335789999999999884  89999999999999999999  999996432111       1222222 34567899999


Q ss_pred             CCCchHHHHHHHHHHCCcc-ceeeccccHHHHHhCCC
Q 032621           87 QSGARSLHATADLLGAGFK-HVSNFGGGHMAWVQNGL  122 (137)
Q Consensus        87 ~~g~ra~~~~~~l~~~G~~-~v~~l~GG~~~w~~~~~  122 (137)
                      ..|..|.++.+.|++...+ +|..+.||+.+|...-.
T Consensus       385 rrGNdSQ~Av~~Lre~~~~~~vrDvigGl~~w~~~vd  421 (427)
T KOG2017|consen  385 RRGNDSQRAVRILREKFPDSSVRDVIGGLKAWAAKVD  421 (427)
T ss_pred             CCCCchHHHHHHHHhhCCchhhhhhhhHHHHHHHhcC
Confidence            9999999999999986543 46678999999977643

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.16  E-value=1.6e-10  Score=84.05  Aligned_cols=90  Identities=24%  Similarity=0.478  Sum_probs=74.2

Q ss_pred             CCEEEecCChHHHh-----------ccCCCCceeeCcccccc-CCCCCCC-ChHHHHHHHhh-ccCCCcEEEEeCCCchH
Q 032621           27 GYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPEGRVK-NPDFLKKVRSL-CKEEDRLVVGCQSGARS   92 (137)
Q Consensus        27 ~~~viDvR~~~e~~-----------~g~ipga~~inip~~~~-~~~~~~~-~~~~~~~~~~~-~~~~~~iv~~c~~g~ra   92 (137)
                      ++.+||.|+..+|.           .||||||  +|+|+..+ .+.+.+. ..++...+.+. +..++++++.|+.|..+
T Consensus       172 ~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa--~n~P~~~~~~~~g~~k~~edl~~~f~~~~l~~~~p~~~sC~~Gisa  249 (286)
T KOG1529|consen  172 NFQYLDARSKGRFDGTEPEPRSGATGGHIPGA--INFPFDEVLDPDGFIKPAEDLKHLFAQKGLKLSKPVIVSCGTGISA  249 (286)
T ss_pred             cceeeeccccccccccCCCCcccCcCccCCCc--ccCChHHhcccccccCCHHHHHHHHHhcCcccCCCEEEeeccchhH
Confidence            48899999988884           4999999  99999765 5555554 33444444444 77789999999999999


Q ss_pred             HHHHHHHHHCCccceeeccccHHHHHh
Q 032621           93 LHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      ...+-.|...| .++.+++|++..|.-
T Consensus       250 ~~i~~al~r~g-~~~~lYdGS~~Ew~~  275 (286)
T KOG1529|consen  250 SIIALALERSG-PDAKLYDGSWTEWAL  275 (286)
T ss_pred             HHHHHHHHhcC-CCcceecccHHHHhh
Confidence            99999999999 779999999999975

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=98.90  E-value=5.4e-09  Score=77.29  Aligned_cols=103  Identities=22%  Similarity=0.306  Sum_probs=77.7

Q ss_pred             CCCCCCceeeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh-h-
Q 032621            5 GKSSGAEVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS-L-   75 (137)
Q Consensus         5 ~~~~~~~~~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~-~-   75 (137)
                      ++.+...+++|+++.++..++..       -.|||+|-+.||..|||-+|  +||-..           +.+..+.. . 
T Consensus       234 ~~~k~Ds~~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY~GGHIina--VNi~s~-----------~~l~~~F~hkp  300 (427)
T COG5105         234 GPGKSDSIQRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEYRGGHIINA--VNISST-----------KKLGLLFRHKP  300 (427)
T ss_pred             CCCcccchhhcCHHHHHHHHhchhhhhhhceeEEeecceeeecCceeeee--eecchH-----------HHHHHHHHhcc
Confidence            45566778999999999999863       35999999999999999999  888653           22222221 1 


Q ss_pred             ccCCCcEEEEeC-CCchHHHHHHHHHHC------------CccceeeccccHHHHHhC
Q 032621           76 CKEEDRLVVGCQ-SGARSLHATADLLGA------------GFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        76 ~~~~~~iv~~c~-~g~ra~~~~~~l~~~------------G~~~v~~l~GG~~~w~~~  120 (137)
                      +.--..+|+.|. +..|+...|.+|+..            =|+.|++|+|||.++-..
T Consensus       301 lThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~n  358 (427)
T COG5105         301 LTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYSN  358 (427)
T ss_pred             ccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhhc
Confidence            222455899998 577999999999753            246799999999987654

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=98.18  E-value=1.8e-05  Score=52.48  Aligned_cols=88  Identities=17%  Similarity=0.178  Sum_probs=57.0

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHhcc----------CCCCceeeCccccccCCCCCCCChHHHHHHHhhc-cCCC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKEG----------HVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC-KEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~g----------~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (137)
                      ..++.+++..+.+.+ ..|||.|+..|....          .-+|..++++|+..    ..++. .-...+...+ ..++
T Consensus        13 ~qlt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~~~~~a~~~gl~y~~iPv~~----~~~~~-~~v~~f~~~~~~~~~   87 (135)
T TIGR01244        13 PQLTKADAAQAAQLGFKTVINNRPDREEESQPDFAQIKAAAEAAGVTYHHQPVTA----GDITP-DDVETFRAAIGAAEG   87 (135)
T ss_pred             CCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHCCCeEEEeecCC----CCCCH-HHHHHHHHHHHhCCC
Confidence            678889998877777 679999987664321          12577778888752    12222 2222222221 2458


Q ss_pred             cEEEEeCCCchHHHHHHHHH-HCCcc
Q 032621           81 RLVVGCQSGARSLHATADLL-GAGFK  105 (137)
Q Consensus        81 ~iv~~c~~g~ra~~~~~~l~-~~G~~  105 (137)
                      +|+++|.+|.|+..++..+. ..|.+
T Consensus        88 pvL~HC~sG~Rt~~l~al~~~~~g~~  113 (135)
T TIGR01244        88 PVLAYCRSGTRSSLLWGFRQAAEGVP  113 (135)
T ss_pred             CEEEEcCCChHHHHHHHHHHHHcCCC
Confidence            89999999999888876543 35665

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=98.11  E-value=1.6e-05  Score=50.90  Aligned_cols=83  Identities=14%  Similarity=0.112  Sum_probs=44.9

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHh----------ccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFK----------EGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~----------~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (137)
                      ..++++++.++.+.| ..||+.|+..|-.          ...--|-.++++|...    ..++ .+-...+... -...+
T Consensus        13 ~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~----~~~~-~~~v~~f~~~l~~~~~   87 (110)
T PF04273_consen   13 GQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG----GAIT-EEDVEAFADALESLPK   87 (110)
T ss_dssp             CS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----T----TT---HHHHHHHHHHHHTTTT
T ss_pred             CCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC----CCCC-HHHHHHHHHHHHhCCC
Confidence            578999999999988 6799999875421          1222355678888752    1222 2222222222 12357


Q ss_pred             cEEEEeCCCchHHHHHHHHH
Q 032621           81 RLVVGCQSGARSLHATADLL  100 (137)
Q Consensus        81 ~iv~~c~~g~ra~~~~~~l~  100 (137)
                      ||++||.+|.||...|..-+
T Consensus        88 Pvl~hC~sG~Ra~~l~~l~~  107 (110)
T PF04273_consen   88 PVLAHCRSGTRASALWALAQ  107 (110)
T ss_dssp             SEEEE-SCSHHHHHHHHHHH
T ss_pred             CEEEECCCChhHHHHHHHHh
Confidence            99999999999988776544

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>COG2603 Predicted ATPase [General function prediction only]

Probab=98.00  E-value=5.5e-06  Score=60.95  Aligned_cols=100  Identities=24%  Similarity=0.297  Sum_probs=65.8

Q ss_pred             CHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCC-------CC--CC-------------ChHHHHHHH
Q 032621           16 DVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-------GR--VK-------------NPDFLKKVR   73 (137)
Q Consensus        16 s~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-------~~--~~-------------~~~~~~~~~   73 (137)
                      +.+++..++.+...+||||++-||..|+.|++  +|+|....+..       ..  .+             ...+.-.++
T Consensus         4 ~~q~~~~~~~~~~~lid~rap~ef~~g~~~ia--~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~as   81 (334)
T COG2603           4 TEQDYRALLLADTPLIDVRAPIEFENGAMPIA--INLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEAS   81 (334)
T ss_pred             hHHHHHHHHhcCCceeeccchHHHhcccchhh--hccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHH
Confidence            34566667777799999999999999999999  99998532110       00  00             000111111


Q ss_pred             hhccCCCcEEEEeCC-CchHHHHHHHH-HHCCccceeeccccHHHHH
Q 032621           74 SLCKEEDRLVVGCQS-GARSLHATADL-LGAGFKHVSNFGGGHMAWV  118 (137)
Q Consensus        74 ~~~~~~~~iv~~c~~-g~ra~~~~~~l-~~~G~~~v~~l~GG~~~w~  118 (137)
                      ...-.+.++-++|.. |.|+...+.+| ...|.+ +.-+.||+.+..
T Consensus        82 k~f~e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKalr  127 (334)
T COG2603          82 KAFQEENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKALR  127 (334)
T ss_pred             HHHHHhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHHH
Confidence            112234555556885 56999999999 667875 777889988764

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.42  E-value=2.8e-05  Score=61.96  Aligned_cols=102  Identities=20%  Similarity=0.247  Sum_probs=71.7

Q ss_pred             CCCceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC
Q 032621            8 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ   87 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~   87 (137)
                      +....++|+.+++..+  ....|+|.|...||..+|++++  +|+|+..  .+..++.-.+.+...  -..++.++++..
T Consensus       617 ~se~~prmsAedl~~~--~~l~v~d~r~~~ef~r~~~s~s--~nip~~~--~ea~l~~~~~l~~~~--~~~~~~~v~~~~  688 (725)
T KOG1093|consen  617 SSEHCPRISAEDLIWL--KMLYVLDTRQESEFQREHFSDS--INIPFNN--HEADLDWLRFLPGIV--CSEGKKCVVVGK  688 (725)
T ss_pred             hhhcCccccHHHHHHH--HHHHHHhHHHHHHHHHhhcccc--ccCCccc--hHHHHHHhhcchHhH--HhhCCeEEEecc
Confidence            3455688999888777  3378999999999999999999  9999961  111111111112222  235666777766


Q ss_pred             CCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621           88 SGARSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      ...-+.+....+..+-+.++.++++|+.++
T Consensus       689 ~~K~~~e~~~~~~~mk~p~~cil~~~~~~~  718 (725)
T KOG1093|consen  689 NDKHAAERLTELYVMKVPRICILHDGFNNI  718 (725)
T ss_pred             chHHHHHHhhHHHHhcccHHHHHHHHHhhc
Confidence            666777777778877798999999998854

>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B

Probab=97.27  E-value=0.0019  Score=44.04  Aligned_cols=95  Identities=17%  Similarity=0.230  Sum_probs=46.9

Q ss_pred             eeeeCHHHHHHHhhCC-CEEEecCChHHHhc---cCCCCceeeCccccccCCCC------C------------------C
Q 032621           12 VITVDVRAAKNLLESG-YGYLDVRTAEEFKE---GHVDAAKIFNIPYMFNTPEG------R------------------V   63 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~-~~viDvR~~~e~~~---g~ipga~~inip~~~~~~~~------~------------------~   63 (137)
                      +..+|.++...+.+-+ ..|||.|++.|...   -.++|..++++|+.......      .                  +
T Consensus        27 l~~lt~~d~~~L~~lgI~tIiDLRs~~E~~~~p~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~  106 (164)
T PF13350_consen   27 LSNLTEADLERLRELGIRTIIDLRSPTERERAPDPLIDGVQYVHIPIFGDDASSPDKLAELLQSSADAPRGMLEFYREML  106 (164)
T ss_dssp             -TT--HHHHHHHHHTT--EEEE-S-HHHHHHHS----TT-EEEE--SS-S-TTH----------HHHHHHHHHHHHHHGG
T ss_pred             cCcCCHHHHHHHHhCCCCEEEECCCccccccCCCCCcCCceeeeecccccccccccccccccccccchhhHHHHHHHHHH
Confidence            3567888888777666 67999999999876   45668888888875332110      0                  0


Q ss_pred             -C-ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHHHHCCccc
Q 032621           64 -K-NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADLLGAGFKH  106 (137)
Q Consensus        64 -~-~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l~~~G~~~  106 (137)
                       . .+.+.+-+..+.+...+++++|..|+ |.-.+ +-.|..+|++.
T Consensus       107 ~~~~~~~~~~~~~l~~~~~p~l~HC~aGKDRTG~~~alll~~lGV~~  153 (164)
T PF13350_consen  107 ESYAEAYRKIFELLADAPGPVLFHCTAGKDRTGVVAALLLSLLGVPD  153 (164)
T ss_dssp             GSTHHHHHHHHHHHH-TT--EEEE-SSSSSHHHHHHHHHHHHTT--H
T ss_pred             HhhhHHHHHHHHHhccCCCcEEEECCCCCccHHHHHHHHHHHcCCCH
Confidence             1 12233333223334479999999998 65555 44566688864

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=96.68  E-value=0.00019  Score=54.10  Aligned_cols=81  Identities=9%  Similarity=0.036  Sum_probs=55.7

Q ss_pred             eCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccC--CCcEEEEeCC--Cc
Q 032621           15 VDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE--EDRLVVGCQS--GA   90 (137)
Q Consensus        15 is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iv~~c~~--g~   90 (137)
                      -+++++.+.+.....++|+|....|..+||||+  +++|..           .+..++.++.+.  .+++++.-..  ..
T Consensus        16 ~~~~~~~~~l~~~~~~~d~rg~i~~a~egIngt--is~~~~-----------~~~~~~~~l~~~~~~~~i~l~~~~~~~~   82 (314)
T PRK00142         16 EDPEAFRDEHLALCKSLGLKGRILVAEEGINGT--VSGTIE-----------QTEAYMAWLKADPRFADIRFKISEDDGH   82 (314)
T ss_pred             CCHHHHHHHHHHHHHHcCCeeEEEEcCCCceEE--EEecHH-----------HHHHHHHHHhhCcCCCCceEEeccccCC
Confidence            357888888887778999999999999999999  999984           566666666332  5666555433  12


Q ss_pred             hH----HHHHHHHHHCCcc-cee
Q 032621           91 RS----LHATADLLGAGFK-HVS  108 (137)
Q Consensus        91 ra----~~~~~~l~~~G~~-~v~  108 (137)
                      ..    ..+...|..+|++ ++.
T Consensus        83 ~f~~l~~~~~~eLv~~G~d~~v~  105 (314)
T PRK00142         83 AFPRLSVKVRKEIVALGLDDDID  105 (314)
T ss_pred             CcccceeeeeeeeeecCCCCCCC
Confidence            22    4455556667774 443

>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases

Probab=96.48  E-value=0.0087  Score=39.10  Aligned_cols=79  Identities=13%  Similarity=0.163  Sum_probs=45.3

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-H-HH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-T-AD   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~-~~   98 (137)
                      ..+ ..|||+++..+...-..+|-.+.++|+..... ..+.  .+.+.+.+......+++|+++|..|. ||..+ + ..
T Consensus        25 ~~gi~~VI~l~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rs~~~~~~~l  103 (139)
T cd00127          25 KLGITHVLNVAKEVPNENLFLSDFNYLYVPILDLPS-QDISKYFDEAVDFIDDAREKGGKVLVHCLAGVSRSATLVIAYL  103 (139)
T ss_pred             HcCCCEEEEcccCCCCcccCCCCceEEEEEceeCCC-CChHHHHHHHHHHHHHHHhcCCcEEEECCCCCchhHHHHHHHH
Confidence            345 68999999877533344555667788753321 1110  01223334333445789999999987 77655 3 33


Q ss_pred             HHHCCc
Q 032621           99 LLGAGF  104 (137)
Q Consensus        99 l~~~G~  104 (137)
                      +...|+
T Consensus       104 ~~~~~~  109 (139)
T cd00127         104 MKTLGL  109 (139)
T ss_pred             HHHcCC
Confidence            344454

Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.

>PLN02727 NAD kinase

Probab=96.05  E-value=0.019  Score=48.75  Aligned_cols=85  Identities=18%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             ceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCC----------CCceeeCccccccCCCCCCCChHHHHHHHhhc--c
Q 032621           11 EVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHV----------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--K   77 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~i----------pga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~   77 (137)
                      ....++++++..+.+.| ..||+.|+..|- .+..          .|-.++++|+.....   + ..+-...+.+.+  .
T Consensus       265 rsgQpspe~la~LA~~GfKTIINLRpd~E~-~q~~~~ee~eAae~~GL~yVhIPVs~~~a---p-t~EqVe~fa~~l~~s  339 (986)
T PLN02727        265 RGGQVTEEGLKWLLEKGFKTIVDLRAEIVK-DNFYQAAVDDAISSGKIEVVKIPVEVRTA---P-SAEQVEKFASLVSDS  339 (986)
T ss_pred             EeCCCCHHHHHHHHHCCCeEEEECCCCCcC-CCchhHHHHHHHHHcCCeEEEeecCCCCC---C-CHHHHHHHHHHHHhh
Confidence            34688999999988888 579999987662 2221          245667888742111   1 123333333333  2


Q ss_pred             CCCcEEEEeCCCch-H-HHHHHHHH
Q 032621           78 EEDRLVVGCQSGAR-S-LHATADLL  100 (137)
Q Consensus        78 ~~~~iv~~c~~g~r-a-~~~~~~l~  100 (137)
                      ..+||+++|.+|.+ + ..++.++.
T Consensus       340 lpkPVLvHCKSGarRAGamvA~yl~  364 (986)
T PLN02727        340 SKKPIYLHSKEGVWRTSAMVSRWKQ  364 (986)
T ss_pred             cCCCEEEECCCCCchHHHHHHHHHH
Confidence            47899999999984 3 44455555

>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.86  E-value=0.039  Score=35.80  Aligned_cols=82  Identities=17%  Similarity=0.183  Sum_probs=51.4

Q ss_pred             eeeeCHHHHHHHhhCC-CEEEecCChHHHhc----------cCCCCceeeCccccccCCCCCCCCh---HHHHHHHhhcc
Q 032621           12 VITVDVRAAKNLLESG-YGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFNTPEGRVKNP---DFLKKVRSLCK   77 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~-~~viDvR~~~e~~~----------g~ipga~~inip~~~~~~~~~~~~~---~~~~~~~~~~~   77 (137)
                      .+.++++++.+.-..+ ..||..|+..|-..          ..-.|-.+.+||...    ..++..   .|.+.+.   .
T Consensus        13 sgQi~~~D~~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~aGl~y~~iPV~~----~~iT~~dV~~f~~Al~---e   85 (130)
T COG3453          13 SGQISPADIASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAAGLTYTHIPVTG----GGITEADVEAFQRALD---E   85 (130)
T ss_pred             cCCCCHHHHHHHHHhccceecccCCCCCCCCCCChHHHHHHHHhcCCceEEeecCC----CCCCHHHHHHHHHHHH---H
Confidence            3578899999998888 56999997544310          001122234555531    123222   3444444   3


Q ss_pred             CCCcEEEEeCCCchHHHHHHHHH
Q 032621           78 EEDRLVVGCQSGARSLHATADLL  100 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~  100 (137)
                      .+.|++-||.+|.||...+..-.
T Consensus        86 aegPVlayCrsGtRs~~ly~~~~  108 (130)
T COG3453          86 AEGPVLAYCRSGTRSLNLYGLGE  108 (130)
T ss_pred             hCCCEEeeecCCchHHHHHHHHH
Confidence            57899999999999988876543

>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]

Probab=95.50  E-value=0.041  Score=43.37  Aligned_cols=101  Identities=24%  Similarity=0.275  Sum_probs=61.1

Q ss_pred             eeeCHHHHHHHhh--CC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-------ccCC-
Q 032621           13 ITVDVRAAKNLLE--SG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-------CKEE-   79 (137)
Q Consensus        13 ~~is~~~~~~~~~--~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-------~~~~-   79 (137)
                      --|++-|+.+.-+  .+   ..|||.|+.++|..||+-.|  +|+.-.-+..    .+..|...+..+       +..+ 
T Consensus       307 Lpisv~el~~~~~~~~~~VrFFiVDcRpaeqynaGHlsta--FhlDc~lmlq----eP~~Fa~av~sLl~aqrqtie~~s  380 (669)
T KOG3636|consen  307 LPISVIELTSHDEISSGSVRFFIVDCRPAEQYNAGHLSTA--FHLDCVLMLQ----EPEKFAIAVNSLLCAQRQTIERDS  380 (669)
T ss_pred             cchhHHHhhcccccccCceEEEEEeccchhhcccccchhh--hcccHHHHhc----CHHHHHHHHHHHHHHHHHhhhccc
Confidence            4455555554432  22   57999999999999999988  8765432111    112454444433       2232 


Q ss_pred             ---CcEEEEeCCCch-----HHHHHHHHHHCCccceeeccccHHHHHh
Q 032621           80 ---DRLVVGCQSGAR-----SLHATADLLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        80 ---~~iv~~c~~g~r-----a~~~~~~l~~~G~~~v~~l~GG~~~w~~  119 (137)
                         .+-+++-.+|..     -..+...+.+.+-..|.++.|||.+..+
T Consensus       381 ~aggeHlcfmGsGr~EED~YmnMviA~FlQKnk~yVS~~~GGy~~lh~  428 (669)
T KOG3636|consen  381 NAGGEHLCFMGSGRDEEDNYMNMVIAMFLQKNKLYVSFVQGGYKKLHD  428 (669)
T ss_pred             cCCcceEEEeccCcchHHHHHHHHHHHHHhcCceEEEEecchHHHHHH
Confidence               355555555542     3444555556666668999999998764

>smart00195 DSPc Dual specificity phosphatase, catalytic domain

Probab=94.83  E-value=0.09  Score=34.37  Aligned_cols=79  Identities=19%  Similarity=0.274  Sum_probs=43.9

Q ss_pred             hhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HH-
Q 032621           24 LESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TA-   97 (137)
Q Consensus        24 ~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~-   97 (137)
                      .+.+ ..||+++...+..  .-++-.++++|..... ...+..  ....+.+......+.+|+++|..|. ||..+ +. 
T Consensus        23 ~~~gi~~Vi~l~~~~~~~--~~~~~~~~~ipi~D~~-~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~~y   99 (138)
T smart00195       23 KKLGITHVINVTNEVPNL--NKKGFTYLGVPILDNT-ETKISPYFPEAVEFIEDAEKKGGKVLVHCQAGVSRSATLIIAY   99 (138)
T ss_pred             HHcCCCEEEEccCCCCCC--CCCCCEEEEEECCCCC-CCChHHHHHHHHHHHHHHhcCCCeEEEECCCCCchHHHHHHHH
Confidence            3445 6799998764421  2345567788875311 111110  1222233333567789999999996 76653 33 


Q ss_pred             HHHHCCcc
Q 032621           98 DLLGAGFK  105 (137)
Q Consensus        98 ~l~~~G~~  105 (137)
                      .+...|++
T Consensus       100 l~~~~~~~  107 (138)
T smart00195      100 LMKYRNLS  107 (138)
T ss_pred             HHHHhCCC
Confidence            34456764

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=94.35  E-value=0.26  Score=37.27  Aligned_cols=65  Identities=12%  Similarity=0.126  Sum_probs=44.5

Q ss_pred             eeeeCHHHHHHHhhCC-CEEEecCChHHHhc---cCCC-CceeeCccccccCCCCCCCChHHHHHHHhh---ccCCCcEE
Q 032621           12 VITVDVRAAKNLLESG-YGYLDVRTAEEFKE---GHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSL---CKEEDRLV   83 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~-~~viDvR~~~e~~~---g~ip-ga~~inip~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv   83 (137)
                      ...+...++++.+... ..|||+|+..+|..   |||| +.    -|.          ...|...+...   +++..+|+
T Consensus       135 ~tg~gKt~Ll~~L~~~~~~VvDlr~~a~hrGs~fG~~~~~~----qps----------q~~fe~~L~~~l~~~~~~~~i~  200 (311)
T TIGR03167       135 MTGSGKTELLHALANAGAQVLDLEGLANHRGSSFGALGLGP----QPS----------QKRFENALAEALRRLDPGRPIF  200 (311)
T ss_pred             CCCcCHHHHHHHHhcCCCeEEECCchHHhcCcccCCCCCCC----CCc----------hHHHHHHHHHHHHhCCCCceEE
Confidence            3567788888888764 78999999999998   8888 42    111          13444444333   46667788


Q ss_pred             EEeCCCc
Q 032621           84 VGCQSGA   90 (137)
Q Consensus        84 ~~c~~g~   90 (137)
                      +-|.+..
T Consensus       201 ~e~es~~  207 (311)
T TIGR03167       201 VEDESRR  207 (311)
T ss_pred             EEeCchh
Confidence            8887643

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=93.73  E-value=0.039  Score=40.66  Aligned_cols=95  Identities=19%  Similarity=0.233  Sum_probs=55.3

Q ss_pred             eeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCcccccc-----C----CC-CCCCC----hHHHHHHHhhccC
Q 032621           14 TVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFN-----T----PE-GRVKN----PDFLKKVRSLCKE   78 (137)
Q Consensus        14 ~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~-----~----~~-~~~~~----~~~~~~~~~~~~~   78 (137)
                      .++++++.+.+..+ .+|+|.|+    ...||.+|  +++-+..+     .    +. ..++.    +.+..+.     +
T Consensus         5 ~~s~~wlnr~l~~~nllllDCRs----es~~i~~A--~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~~c-----~   73 (343)
T KOG1717|consen    5 SKSVAWLNRQLELGNLLLLDCRS----ESSHIESA--INVALPALMLRRLTGGNLPVRALFPRSCDDKRFPARC-----G   73 (343)
T ss_pred             HHHHHHHHhhcccCceEEEecCC----ccchhhhh--hhhcchHHHHHHHhCCCCcceeccCCccccccccccC-----C
Confidence            46788888888764 89999999    46789888  55443221     0    00 00100    1111111     2


Q ss_pred             CCcEEEEeCCC--chH----HHH----HHHHHHCCccceeeccccHHHHHhC
Q 032621           79 EDRLVVGCQSG--ARS----LHA----TADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        79 ~~~iv~~c~~g--~ra----~~~----~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      ...+|+|+.+.  +..    +..    -..++..|.. ++.|.||+..+..+
T Consensus        74 ~v~vilyD~~~~e~e~~~~~~s~Lg~ll~kl~~~g~~-a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   74 TVTVILYDESSAEWEEETGAESVLGLLLKKLKDEGCS-ARYLSGGFSKFQAE  124 (343)
T ss_pred             cceeeecccccccccccchhhhHHHHHHHHHHhcCcc-hhhhhcccchhhhh
Confidence            35688888762  111    111    1345567876 99999999887654

>PTZ00242 protein tyrosine phosphatase; Provisional

Probab=92.36  E-value=1  Score=30.84  Aligned_cols=82  Identities=16%  Similarity=0.244  Sum_probs=41.8

Q ss_pred             HHHHHhh-CC-CEEEecCC----hHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh----ccCCCcEEEEeCC
Q 032621           19 AAKNLLE-SG-YGYLDVRT----AEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL----CKEEDRLVVGCQS   88 (137)
Q Consensus        19 ~~~~~~~-~~-~~viDvR~----~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iv~~c~~   88 (137)
                      +..+.++ .+ ..||.+..    .+.+...+|   .+.++|+....+...-.-.+|.+.+...    ...+.+|+++|..
T Consensus        31 ~~l~~L~~~gI~~Iv~l~~~~~~~~~~~~~gi---~~~~~p~~D~~~P~~~~i~~~~~~i~~~~~~~~~~g~~V~VHC~a  107 (166)
T PTZ00242         31 LYIKELQRYNVTHLVRVCGPTYDAELLEKNGI---EVHDWPFDDGAPPPKAVIDNWLRLLDQEFAKQSTPPETIAVHCVA  107 (166)
T ss_pred             HHHHHHHhCCCeEEEecCCCCCCHHHHHHCCC---EEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCeEEEECCC
Confidence            3334444 45 45777743    234444455   3466776422111110002344433332    2458899999998


Q ss_pred             Cc-hHHHH-HHHHHHCC
Q 032621           89 GA-RSLHA-TADLLGAG  103 (137)
Q Consensus        89 g~-ra~~~-~~~l~~~G  103 (137)
                      |. ||..+ +.+|.+.|
T Consensus       108 GigRSgt~~a~yL~~~~  124 (166)
T PTZ00242        108 GLGRAPILVALALVEYG  124 (166)
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            87 76654 55555544

>PRK12361 hypothetical protein; Provisional

Probab=92.27  E-value=0.33  Score=39.33  Aligned_cols=82  Identities=20%  Similarity=0.211  Sum_probs=43.4

Q ss_pred             HHHHHHHhhCC-CEEEecCChHHHhc--cCCCCceeeCccccccCCCCCCCChHHHH---HHHhhccCCCcEEEEeCCCc
Q 032621           17 VRAAKNLLESG-YGYLDVRTAEEFKE--GHVDAAKIFNIPYMFNTPEGRVKNPDFLK---KVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        17 ~~~~~~~~~~~-~~viDvR~~~e~~~--g~ipga~~inip~~~~~~~~~~~~~~~~~---~~~~~~~~~~~iv~~c~~g~   90 (137)
                      +.++..+.+.+ ..|||+|...+...  ....+-.+.++|.......   ...++.+   .+.+....+.+|+++|..|.
T Consensus       110 a~d~~~L~~~gI~~Vldlt~E~~~~~~~~~~~~i~yl~iPi~D~~~p---~~~~l~~a~~~i~~~~~~~~~VlVHC~~G~  186 (547)
T PRK12361        110 PADLEKLKSNKITAILDVTAEFDGLDWSLTEEDIDYLNIPILDHSVP---TLAQLNQAINWIHRQVRANKSVVVHCALGR  186 (547)
T ss_pred             cccHHHHHHcCCCEEEEcccccccccccccccCceEEEeecCCCCCC---cHHHHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence            44444444455 67999995322111  1122345678887533211   1123333   33323456788999999887


Q ss_pred             -hHHHH-HHHHHH
Q 032621           91 -RSLHA-TADLLG  101 (137)
Q Consensus        91 -ra~~~-~~~l~~  101 (137)
                       ||..+ +.+|..
T Consensus       187 sRSa~vv~ayLm~  199 (547)
T PRK12361        187 GRSVLVLAAYLLC  199 (547)
T ss_pred             CcHHHHHHHHHHH
Confidence             65544 455543

>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species

Probab=91.69  E-value=0.66  Score=31.92  Aligned_cols=84  Identities=18%  Similarity=0.214  Sum_probs=35.5

Q ss_pred             HHHHhhCC-CEEEecCChHHHhccCCC---------CceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           20 AKNLLESG-YGYLDVRTAEEFKEGHVD---------AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        20 ~~~~~~~~-~~viDvR~~~e~~~g~ip---------ga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      +.++...+ ..||=.-+..|...-.+|         |-.|+++|+........-..-++...+...+..+++|+++|.+|
T Consensus        64 L~~Lk~~G~~~Vvtl~~~~EL~~l~Vp~L~~~~~~~Gi~~~h~PI~D~~aPd~~~~~~i~~eL~~~L~~g~~V~vHC~GG  143 (168)
T PF05706_consen   64 LERLKDWGAQDVVTLLTDHELARLGVPDLGEAAQARGIAWHHLPIPDGSAPDFAAAWQILEELAARLENGRKVLVHCRGG  143 (168)
T ss_dssp             HHHHHHTT--EEEE-S-HHHHHHTT-TTHHHHHHHTT-EEEE----TTS---HHHHHHHHHHHHHHHHTT--EEEE-SSS
T ss_pred             HHHHHHCCCCEEEEeCcHHHHHHcCCccHHHHHHHcCCEEEecCccCCCCCCHHHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            33333334 345556666666543343         44667777743211100000123333433378899999999998


Q ss_pred             c-hHHH-HHHHHHHCC
Q 032621           90 A-RSLH-ATADLLGAG  103 (137)
Q Consensus        90 ~-ra~~-~~~~l~~~G  103 (137)
                      . |+.. +|..|.++|
T Consensus       144 lGRtGlvAAcLLl~L~  159 (168)
T PF05706_consen  144 LGRTGLVAACLLLELG  159 (168)
T ss_dssp             SSHHHHHHHHHHHHH-
T ss_pred             CCHHHHHHHHHHHHHc
Confidence            6 7655 455566555

The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.

>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=91.21  E-value=0.28  Score=31.73  Aligned_cols=78  Identities=15%  Similarity=0.180  Sum_probs=40.9

Q ss_pred             CEEEecCChHHH-hccCCCCceeeCccccccCCCCCC-CChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHHH-HC
Q 032621           28 YGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRV-KNPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADLL-GA  102 (137)
Q Consensus        28 ~~viDvR~~~e~-~~g~ipga~~inip~~~~~~~~~~-~~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l~-~~  102 (137)
                      ..||+++...+. ....-++-...++|.......... .-..+...+......+.+|+++|..|. ||..+ +.+|. ..
T Consensus        20 ~~Vin~~~~~~~~~~~~~~~~~~~~i~~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~~~   99 (133)
T PF00782_consen   20 THVINLQEECPNPYFYKPEGIEYLRIPIDDDPEEPILEHLDQAVEFIENAISEGGKVLVHCKAGLSRSGAVAAAYLMKKN   99 (133)
T ss_dssp             EEEEECSSSSSTSHHHTTTTSEEEEEEEESSTTSHGGGGHHHHHHHHHHHHHTTSEEEEEESSSSSHHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCcCchhcccCCCEEEEEEecCCCCcchHHHHHHHHHhhhhhhcccceeEEEeCCCcccchHHHHHHHHHHc
Confidence            469999975443 112233335577776431111000 011233333333567889999999987 66554 33343 35


Q ss_pred             Ccc
Q 032621          103 GFK  105 (137)
Q Consensus       103 G~~  105 (137)
                      |++
T Consensus       100 ~~~  102 (133)
T PF00782_consen  100 GMS  102 (133)
T ss_dssp             TSS
T ss_pred             CCC
Confidence            653

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....

>PTZ00393 protein tyrosine phosphatase; Provisional

Probab=91.14  E-value=2.1  Score=31.18  Aligned_cols=71  Identities=18%  Similarity=0.306  Sum_probs=40.2

Q ss_pred             CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChH----HHHHHHhhccCCCcEEEEeCCCc-hHHH-HHH
Q 032621           28 YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD----FLKKVRSLCKEEDRLVVGCQSGA-RSLH-ATA   97 (137)
Q Consensus        28 ~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~----~~~~~~~~~~~~~~iv~~c~~g~-ra~~-~~~   97 (137)
                      ..||.+...    .++....|   .+.++|+..    ...+..+    |...+...+..+..|+++|..|. |+.. ++.
T Consensus       118 ~~lVrlcE~~Yd~~~~~~~GI---~~~~lpipD----g~aPs~~~i~~~l~~i~~~l~~g~~VaVHC~AGlGRTGtl~Aa  190 (241)
T PTZ00393        118 TDLVRTCERTYNDGEITSAGI---NVHELIFPD----GDAPTVDIVSNWLTIVNNVIKNNRAVAVHCVAGLGRAPVLASI  190 (241)
T ss_pred             CEEEECCCCCCCHHHHHHcCC---eEEEeecCC----CCCCCHHHHHHHHHHHHHHHhcCCeEEEECCCCCCHHHHHHHH
Confidence            467777532    34443333   446666642    2222223    34444333557888999999886 6544 455


Q ss_pred             HHHHCCcc
Q 032621           98 DLLGAGFK  105 (137)
Q Consensus        98 ~l~~~G~~  105 (137)
                      +|.+.|++
T Consensus       191 yLI~~Gms  198 (241)
T PTZ00393        191 VLIEFGMD  198 (241)
T ss_pred             HHHHcCCC
Confidence            66667764

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=90.99  E-value=0.79  Score=28.61  Aligned_cols=37  Identities=19%  Similarity=0.197  Sum_probs=27.9

Q ss_pred             hHHHHHHHhhccCCCcEEEEeCCCchH-HHHHHHHHHCCcc
Q 032621           66 PDFLKKVRSLCKEEDRLVVGCQSGARS-LHATADLLGAGFK  105 (137)
Q Consensus        66 ~~~~~~~~~~~~~~~~iv~~c~~g~ra-~~~~~~l~~~G~~  105 (137)
                      .++.+.+.+   .+++++++.+.+.++ ...+..|+.+|++
T Consensus        20 ~e~l~~L~~---~g~~~~~lTNns~~s~~~~~~~L~~~Gi~   57 (101)
T PF13344_consen   20 VEALDALRE---RGKPVVFLTNNSSRSREEYAKKLKKLGIP   57 (101)
T ss_dssp             HHHHHHHHH---TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred             HHHHHHHHH---cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence            367777764   578999999988766 7778889999986

...

>PF01451 LMWPc: Low molecular weight phosphotyrosine protein phosphatase; InterPro: IPR023485 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=89.97  E-value=0.21  Score=32.78  Aligned_cols=36  Identities=25%  Similarity=0.222  Sum_probs=28.5

Q ss_pred             EEEEeCCCc-hHHHHHHHHHHC----CccceeeccccHHHH
Q 032621           82 LVVGCQSGA-RSLHATADLLGA----GFKHVSNFGGGHMAW  117 (137)
Q Consensus        82 iv~~c~~g~-ra~~~~~~l~~~----G~~~v~~l~GG~~~w  117 (137)
                      |+|+|.++. ||..+...|+.+    +-.++.+...|+.+|
T Consensus         1 ILFvC~~N~cRS~mAEai~~~~~~~~~~~~~~v~SAG~~~~   41 (138)
T PF01451_consen    1 ILFVCTGNICRSPMAEAILRHLLKQRLGDRFEVESAGTEAW   41 (138)
T ss_dssp             EEEEESSSSSHHHHHHHHHHHHHHHTHTTTEEEEEEESSST
T ss_pred             CEEEeCCCcchHHHHHHHHHHhccccccCCcEEEEEeeccc
Confidence            789999876 999888888877    556688888887755

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents the low molecular weight (LMW) protein-tyrosine phosphatases (or acid phosphatase), which act on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates [, ]. The structure of a LMW PTPase has been solved by X-ray crystallography [] and is found to form a single structural domain. It belongs to the alpha/beta class, with 6 alpha-helices and 4 beta-strands forming a 3-layer alpha-beta-alpha sandwich architecture.; PDB: 3RH0_B 1JL3_B 2IPA_B 1Z2D_A 1Z2E_A 2CWD_D 2L18_A 2L17_A 2L19_A 1BVH_A ....

>smart00226 LMWPc Low molecular weight phosphatase family

Probab=89.40  E-value=0.45  Score=31.24  Aligned_cols=36  Identities=25%  Similarity=0.239  Sum_probs=26.9

Q ss_pred             EEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHH
Q 032621           82 LVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        82 iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      |+|+|.+.. ||..+..+|+.+.-.++.+...|+.+|
T Consensus         1 vLFVC~~N~cRSpmAEa~~~~~~~~~~~v~SAG~~~~   37 (140)
T smart00226        1 ILFVCTGNICRSPMAEALFKAIVGDRVKIDSAGTGAW   37 (140)
T ss_pred             CEEEeCChhhhHHHHHHHHHHhcCCCEEEEcCcccCC
Confidence            588998766 899999888876544577777777655

>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]

Probab=89.39  E-value=0.75  Score=31.82  Aligned_cols=29  Identities=24%  Similarity=0.405  Sum_probs=20.2

Q ss_pred             HHHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621           67 DFLKKVRSLCKEEDRLVVGCQSGA-RSLHA   95 (137)
Q Consensus        67 ~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~   95 (137)
                      ++...+......++.|++.|..|. ||..+
T Consensus        93 ~~v~~i~~~~~~g~kVvVHC~~GigRSgtv  122 (180)
T COG2453          93 KIVDFIEEALSKGKKVVVHCQGGIGRSGTV  122 (180)
T ss_pred             HHHHHHHHHHhcCCeEEEEcCCCCchHHHH
Confidence            344455544677789999999987 66554

>PF09992 DUF2233: Predicted periplasmic protein (DUF2233); InterPro: IPR018711 This entry contains proteins that catalyze the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides, this is achieved by removing GlcNAc residues from GlcNAc-alpha-P-mannose moieties, which are formed in the first step

Probab=88.49  E-value=0.64  Score=31.60  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=24.2

Q ss_pred             ccCCCcEEEEe-C----CCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621           76 CKEEDRLVVGC-Q----SGARSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        76 ~~~~~~iv~~c-~----~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      ++++..+++++ .    .|.....++..|+++|..+...||||-..-
T Consensus        97 ~~~~g~l~l~~vdg~~~~g~tl~ela~~l~~lG~~~AinLDGGgSs~  143 (170)
T PF09992_consen   97 VTADGKLLLIVVDGRQSAGMTLDELAQLLKSLGCVDAINLDGGGSST  143 (170)
T ss_dssp             E-TTSEEEEEEE----S--B-HHHHHHHHHHHT-SEEEE---GGG--
T ss_pred             EeCCCcEEEEEEcCCcCCCCCHHHHHHHHHHcCcCeEEEecCCcceE
Confidence            44555554444 4    367788999999999999999999997664

; PDB: 3OHG_A.

>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes

Probab=88.32  E-value=1.8  Score=29.58  Aligned_cols=32  Identities=25%  Similarity=0.480  Sum_probs=25.2

Q ss_pred             cCCCcEEEEeCCCc---hHHHHHHHHHHCCccceee
Q 032621           77 KEEDRLVVGCQSGA---RSLHATADLLGAGFKHVSN  109 (137)
Q Consensus        77 ~~~~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~  109 (137)
                      .+..+|+++|..|.   .+..++++|...|++ |.+
T Consensus        23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~-V~v   57 (169)
T PF03853_consen   23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYN-VTV   57 (169)
T ss_dssp             CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred             cCCCeEEEEECCCCChHHHHHHHHHHHHCCCe-EEE
Confidence            67888999999875   578889999999997 665

In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....

>TIGR02689 ars_reduc_gluta arsenate reductase, glutathione/glutaredoxin type

Probab=86.20  E-value=1.4  Score=28.58  Aligned_cols=34  Identities=18%  Similarity=0.234  Sum_probs=23.9

Q ss_pred             cEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621           81 RLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        81 ~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      .|+|+|.+.. ||..+..+|+.++-+++.+...|.
T Consensus         2 ~vlfvC~~N~cRS~mAEa~~~~~~~~~~~v~SAG~   36 (126)
T TIGR02689         2 KVMFVCKRNSCRSQMAEGFAKTLGAGNIAVTSAGL   36 (126)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEcCcC
Confidence            5888998765 888888888876544555555554

Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily.

>PRK10126 tyrosine phosphatase; Provisional

Probab=85.60  E-value=1.1  Score=29.97  Aligned_cols=37  Identities=22%  Similarity=0.121  Sum_probs=27.6

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      ..|+|+|.+.. ||..+...|+..+- .+.+...|..+|
T Consensus         3 ~~iLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAG~~~~   40 (147)
T PRK10126          3 NNILVVCVGNICRSPTAERLLQRYHP-ELKVESAGLGAL   40 (147)
T ss_pred             CeEEEEcCCcHhHHHHHHHHHHHhcC-CeEEEeeeccCC
Confidence            46999999876 99999999988763 355566666444

>PRK11391 etp phosphotyrosine-protein phosphatase; Provisional

Probab=83.20  E-value=1.6  Score=29.03  Aligned_cols=37  Identities=19%  Similarity=0.082  Sum_probs=27.1

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      +.|+|+|.+.. ||..+...|+...- ++.+...|..+|
T Consensus         3 ~~ILfVC~gN~cRSpmAEa~~~~~~~-~~~v~SaG~~~~   40 (144)
T PRK11391          3 NSILVVCTGNICRSPIGERLLRKRLP-GVKVKSAGVHGL   40 (144)
T ss_pred             CeEEEEcCCcHhHHHHHHHHHHHhcC-CeEEEcccccCC
Confidence            46999998766 99999999987653 355666666544

>COG0062 Uncharacterized conserved protein [Function unknown]

Probab=82.82  E-value=4.7  Score=28.66  Aligned_cols=31  Identities=32%  Similarity=0.537  Sum_probs=24.8

Q ss_pred             CCcEEEEeCCCc---hHHHHHHHHHHCCccceeec
Q 032621           79 EDRLVVGCQSGA---RSLHATADLLGAGFKHVSNF  110 (137)
Q Consensus        79 ~~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l  110 (137)
                      ...|+++|..|.   -...+|++|...|++ |.++
T Consensus        49 ~~~v~vlcG~GnNGGDG~VaAR~L~~~G~~-V~v~   82 (203)
T COG0062          49 ARRVLVLCGPGNNGGDGLVAARHLKAAGYA-VTVL   82 (203)
T ss_pred             CCEEEEEECCCCccHHHHHHHHHHHhCCCc-eEEE
Confidence            457999999765   588999999999986 6543

>PRK13530 arsenate reductase; Provisional

Probab=82.67  E-value=2.4  Score=27.83  Aligned_cols=35  Identities=14%  Similarity=0.012  Sum_probs=25.2

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      +.|+|+|.+.. ||..+..+++.+.-+++.+...|.
T Consensus         4 ~~vLFvC~~N~cRS~mAEal~~~~~~~~~~v~SAG~   39 (133)
T PRK13530          4 KTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGI   39 (133)
T ss_pred             CEEEEEcCCchhHHHHHHHHHHHhcCCCEEEECCCC
Confidence            56999998766 888888888775434566666665

>cd00115 LMWPc Substituted updates: Aug 22, 2001

Probab=81.84  E-value=2  Score=28.20  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=26.8

Q ss_pred             cEEEEeCCCc-hHHHHHHHHHHCCcc-ceeeccccHHHH
Q 032621           81 RLVVGCQSGA-RSLHATADLLGAGFK-HVSNFGGGHMAW  117 (137)
Q Consensus        81 ~iv~~c~~g~-ra~~~~~~l~~~G~~-~v~~l~GG~~~w  117 (137)
                      +|+|+|.+.. ||..+..+++...-+ ++.+...|...+
T Consensus         2 ~iLfvc~~N~~RS~mAEai~~~~~~~~~~~v~SaG~~~~   40 (141)
T cd00115           2 KVLFVCTGNICRSPMAEAIFRHLAPKLDIEVDSAGTSGW   40 (141)
T ss_pred             eEEEEecChhhhhHHHHHHHHHHhhhCCEEEECCCCCCc
Confidence            5899998766 888888888876433 566777776543

>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=81.46  E-value=5.9  Score=27.06  Aligned_cols=75  Identities=15%  Similarity=0.293  Sum_probs=32.7

Q ss_pred             CEEEecCCh---HHHh----ccCCCCceeeCccccccCC-CCCCCChHHHHHHHhhcc-CCCcEEEEeCCCc-hHHHHHH
Q 032621           28 YGYLDVRTA---EEFK----EGHVDAAKIFNIPYMFNTP-EGRVKNPDFLKKVRSLCK-EEDRLVVGCQSGA-RSLHATA   97 (137)
Q Consensus        28 ~~viDvR~~---~e~~----~g~ipga~~inip~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~iv~~c~~g~-ra~~~~~   97 (137)
                      ..||.+|+.   .++.    .-.|   ..++++...... ...+......+.+.-+++ ...||+++|..|. |...+..
T Consensus        34 KTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~vvg  110 (164)
T PF03162_consen   34 KTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLVVG  110 (164)
T ss_dssp             SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHHHH
T ss_pred             ceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhHHH
Confidence            579999865   2221    1222   345665542221 122233334444333333 4579999999887 7777776


Q ss_pred             HHHH-CCcc
Q 032621           98 DLLG-AGFK  105 (137)
Q Consensus        98 ~l~~-~G~~  105 (137)
                      .|+. .||.
T Consensus       111 ~lRk~Q~W~  119 (164)
T PF03162_consen  111 CLRKLQGWS  119 (164)
T ss_dssp             HHHHHTTB-
T ss_pred             HHHHHcCCC
Confidence            6665 6876

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.

>TIGR00197 yjeF_nterm yjeF N-terminal region

Probab=81.25  E-value=6  Score=27.96  Aligned_cols=34  Identities=18%  Similarity=0.303  Sum_probs=25.8

Q ss_pred             ccCCCcEEEEeCCCc---hHHHHHHHHHHCCccceeec
Q 032621           76 CKEEDRLVVGCQSGA---RSLHATADLLGAGFKHVSNF  110 (137)
Q Consensus        76 ~~~~~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l  110 (137)
                      .+..++|+++|..|.   .+..+|++|...|++ |+.+
T Consensus        42 ~~~~~~v~vl~G~GNNGGDGlv~AR~L~~~~v~-V~~~   78 (205)
T TIGR00197        42 FPLAGHVIIFCGPGNNGGDGFVVARHLKGFGVE-VFLL   78 (205)
T ss_pred             cCCCCeEEEEECCCCCccHHHHHHHHHHhCCCE-EEEE
Confidence            345678999999654   688889999888875 7655

This model is built on yeast protein YNL200C and the N-terminal regions of E. coli yjeF and its orthologs in various species. The C-terminal region of yjeF and its orthologs shows similarity to hydroxyethylthiazole kinase (thiM) and other enzymes involved in thiamine biosynthesis. Yeast YKL151C and B. subtilis yxkO match the yjeF C-terminal domain but lack this region.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	137
1tq1_A	129	Solution Structure Of At5g66040, A Putative Protein		8e-26

>pdb|1TQ1|A Chain A, Solution Structure Of At5g66040, A Putative Protein From Arabidosis Thaliana Length = 129

Iteration: 1
 Score =  112 bits (279), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V V  A +LL +G+ YLDVRT EEF +GH  A    N+PYM     G  KN DFL++V 
Sbjct: 19  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGH--ACGAINVPYMNRGASGMSKNTDFLEQVS 76
Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
           S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct: 77  SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	137
1tq1_A	129	AT5G66040, senescence-associated family protein; C	1e-38
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	3e-22
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	1e-20
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	2e-20
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	6e-20
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	6e-19
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	1e-18
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	1e-18
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	1e-18
1vee_A	134	Proline-rich protein family; hypothetical protein,	3e-18
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	6e-18
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	8e-18
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	6e-17
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	2e-16
2jtq_A	85	Phage shock protein E; solution structure rhodanes	1e-15
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	5e-14
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	4e-12
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	1e-07
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	4e-05
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	6e-14
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	5e-04
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	7e-14
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	5e-13
3r2u_A	466	Metallo-beta-lactamase family protein; structural	3e-12
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	4e-12
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	9e-12
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	1e-10
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	3e-10
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	3e-08
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	3e-07
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	1e-06
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	6e-05
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	2e-04
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	3e-04

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score =  125 bits (317), Expect = 1e-38
 Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 2/113 (1%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V V  A +LL +G+ YLDVRT EEF +GH   A   N+PYM     G  KN DFL++V 
Sbjct: 19  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAI--NVPYMNRGASGMSKNTDFLEQVS 76

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
           S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct: 77  SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 84.4 bits (209), Expect = 3e-22
 Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 7   SSGAEVITVDVRAAKNLLESGYGY---LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
            + + + +      K ++         +DVR   E+   H+ A+   N+PY  +     +
Sbjct: 17  KNVSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--NVPYRSHPDAFAL 74

Query: 64  KNPDFLKKVRSLCKEEDR-LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
              +F K++     +  + L+  C SG R   A       G+ + S + G    WV +G 
Sbjct: 75  DPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGG 134

Query: 123 KV 124
             
Sbjct: 135 DK 136

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 80.5 bits (199), Expect = 1e-20
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 16/115 (13%)

Query: 15  VDVRAAKNLLESGYGY---LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 71
            D    K+ LE G      LDVR    + +GH+  A    +P             D + +
Sbjct: 2   SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--AMPI-----------EDLVDR 48

Query: 72  VRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
             S  ++   + V      ++  A   L  AGF+HVS   GG  AW   G   + 
Sbjct: 49  ASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEG 103

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 78.8 bits (195), Expect = 2e-20
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 19/117 (16%)

Query: 21  KNLLESGYGY---LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCK 77
           K+ LE G      LDVR    + +GH+  A    +P             D + +  S  +
Sbjct: 4   KSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--AMPI-----------EDLVDRASSSLE 50

Query: 78  EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADHR 134
           +   + V      ++  A   L  AGF+HVS   GG  AW   G      E    H 
Sbjct: 51  KSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPT---ELEHHHH 104

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3 Length = 137

 Score = 78.5 bits (194), Expect = 6e-20
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 13/127 (10%)

Query: 10  AEVITVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAK-IFNIPYMFNTPEGRVKNP 66
           A+++ +  + A  LL+       +DVR  +E K       K   ++       E  +   
Sbjct: 20  ADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSR--GKLEPLLAKS 77

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
                       E  +VV C++ AR+  A   L   GFK + N  GG   W++ GL    
Sbjct: 78  GLDP--------EKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLD 129

Query: 127 REKPADH 133
           R     H
Sbjct: 130 RSHHHHH 136

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris} Length = 139

 Score = 76.2 bits (188), Expect = 6e-19
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 18/129 (13%)

Query: 10  AEVITVDVRAAKNLLESGYGY---LDVRTAEEF-KEGHVDAAKIFNIPY----MFNTPEG 61
           + + T+    A  L +SG      +D+R   E  ++G +  +  F+        +  P+ 
Sbjct: 19  SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGS--FSCTRGMLEFWIDPQS 76

Query: 62  RVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
               P F        +E+ + V  C  G RS  A       G K V++  GG  AW   G
Sbjct: 77  PYAKPIF--------QEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAG 128

Query: 122 LKVKAREKP 130
             ++A    
Sbjct: 129 GPIEAWAPK 137

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 74.7 bits (184), Expect = 1e-18
 Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 13/106 (12%)

Query: 19  AAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE 78
           + + +  + +  +DVR  +E++E H+  A    I    N  E         K        
Sbjct: 8   SLEEVNFNDFIVVDVRELDEYEELHLPNAT--LIS--VNDQEKLADFLSQHK-------- 55

Query: 79  EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124
           + ++++ C++G R+L A   +   G+       G    + + G ++
Sbjct: 56  DKKVLLHCRAGRRALDAAKSMHELGYTPYYL-EGNVYDFEKYGFRM 100

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} Length = 94

 Score = 73.8 bits (182), Expect = 1e-18
 Identities = 23/106 (21%), Positives = 34/106 (32%), Gaps = 16/106 (15%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
            V       LLE G   +DVR A+        AA+   +P      +             
Sbjct: 3   KVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAE--WVP--LEKIQKGEHGLP------ 52

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ 119
                   L++ C+ G  S  A   L   G++   +  GG  A  Q
Sbjct: 53  -----RRPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQ 92

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A Length = 134

 Score = 74.3 bits (182), Expect = 3e-18
 Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 9   GAEVITVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP 66
           G+   +   + A   L +      LD+R   +F++      K      +     G    P
Sbjct: 1   GSSGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE-DKP 59

Query: 67  DFLKKVRSLCKE--EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG---HMAWVQNG 121
            FLKK+    K+     L +  +    S      +   GFK       G      W+ + 
Sbjct: 60  GFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSS 119

Query: 122 LKVKAREKPAD 132
           L     +K + 
Sbjct: 120 LPWIEPKKTSG 130

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 72.7 bits (179), Expect = 6e-18
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 15/105 (14%)

Query: 14  TVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV 72
            ++V  A   L+     L D+R  + F  GH   A   ++    +T    +++ DF   V
Sbjct: 6   CINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAF--HLT--NDTLGAFMRDNDFDTPV 61

Query: 73  RSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
                     +V C  G  S  A   LL  G+  V +  GG  AW
Sbjct: 62  ----------MVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAW 96

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp} Length = 100

 Score = 72.2 bits (178), Expect = 8e-18
 Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 14  TVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 71
           ++ V   K  +        +DVRT +E   G +  A+   IP M                
Sbjct: 3   SITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--TIP-M----------NSIPDN 49

Query: 72  VRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
           +      E    + C++G RS      L   G     N  GG   +   GL
Sbjct: 50  LNYFNDNET-YYIICKAGGRSAQVVQYLEQNGVN-AVNVEGGMDEFGDEGL 98

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1} Length = 108

 Score = 70.3 bits (173), Expect = 6e-17
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 16/120 (13%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +++       +++    LDVR   E   G +  +   NIP             +  +K +
Sbjct: 5   SINAADLYENIKAYT-VLDVREPFELIFGSIANSI--NIPI-----------SELREKWK 50

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADH 133
            L +++    V C  G RS  A   L   G   + +  GG  +W++ G  V        H
Sbjct: 51  ILERDKK-YAVICAHGNRSAAAVEFLSQLGLN-IVDVEGGIQSWIEEGYPVVLEHHHHHH 108

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis} Length = 148

 Score = 69.7 bits (170), Expect = 2e-16
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 9/111 (8%)

Query: 20  AKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNT--PEGRVKNPDFLKKVRSL 75
           A  +L        +DVR   E++   V          ++          N +FL ++R  
Sbjct: 12  AWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDR 71

Query: 76  CKE-----EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
                   E  ++  C+SG RS+ A      AG     N   G    +   
Sbjct: 72  IPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAE 122

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Length = 85

 Score = 66.1 bits (162), Expect = 1e-15
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 31  LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90
           +DVR  E++++ HV  A   NIP      + R+      K         D + V C +G 
Sbjct: 5   IDVRVPEQYQQEHVQGAI--NIP--LKEVKERIATAVPDK--------NDTVKVYCNAGR 52

Query: 91  RSLHATADLLGAGFKHVSNFGG 112
           +S  A   L   G+ HV N GG
Sbjct: 53  QSGQAKEILSEMGYTHVENAGG 74

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 66.3 bits (161), Expect = 5e-14
 Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 15/119 (12%)

Query: 19  AAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKE 78
            A  L E G   LD   +  + + H+  A    +                 + +  L   
Sbjct: 384 LADWLGEPGTRVLDFTASANYAKRHIPGAA--WVLR-----------SQLKQALERLGTA 430

Query: 79  EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA-REKPADHRSD 136
           E R V+ C S   +  A A++     K V    GG  AWV  GL  +      A  R D
Sbjct: 431 E-RYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESLLASPRID 488

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 61.3 bits (148), Expect = 4e-12
 Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 16/118 (13%)

Query: 8   SGAEVITVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN 65
           S +++        +  L +      LDVR  + F + H   A   N+P            
Sbjct: 2   SLSQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--NLPL----------- 48

Query: 66  PDFLKKVRSLCKEED-RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
                ++ +     D  + V       +  A   L   G+  V+   GG   W   G 
Sbjct: 49  SRLELEIHARVPRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGG 106

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 48.6 bits (115), Expect = 1e-07
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 13  ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV 72
           +  +   A     +    LD R  +E++   +      ++P             + + +V
Sbjct: 132 LAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGI--SVPG-----------AELVLRV 178

Query: 73  RSLCKEEDR-LVVGCQSGARSLHATADLLGAGFKHV-SNFGGGHMAWVQNGLKVKAREKP 130
             L  +    ++V C    RS+  T  LL AG  +  +    G + W   G +++  +  
Sbjct: 179 AELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQTR 238

Query: 131 AD 132
             
Sbjct: 239 RF 240

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 16/104 (15%)

Query: 16  DVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPY--MFNTPEGRVKNPDFLKKVR 73
            +   ++  +     LDVRT EE++ GH+  ++  + P   +    +             
Sbjct: 271 GLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSR--STPGGQLVQETDHVASVRG------ 322

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
                  RLV+    G R+  + + L   G++     G     +
Sbjct: 323 ------ARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEADF 360

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 66.2 bits (161), Expect = 6e-14
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 20  AKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEE 79
              L + G   LDVR  +E+  GH+  A   +IP                  +  + ++ 
Sbjct: 382 RGALAQQGLWLLDVRNVDEWAGGHLPQAH--HIPL-----------SKLAAHIHDVPRDG 428

Query: 80  DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
             + V C++G RS  A + L   G   V N  GG+ AW   G  V+A
Sbjct: 429 S-VCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 13/98 (13%)

Query: 24  LESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLV 83
              G   LDVR A+ F + H+  +        F T  G +   D              + 
Sbjct: 283 WREGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPAD------------RPIH 330

Query: 84  VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
           +       +      L   G   V ++           
Sbjct: 331 LLAADA-IAPDVIRALRSIGIDDVVDWTDPAAVDRAAP 367

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} Length = 127

 Score = 62.8 bits (153), Expect = 7e-14
 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 15/119 (12%)

Query: 14  TVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPY-----MFNTPEGRVKNP 66
            V V   K LL+SG  +  LDVR   E     +  A   +IP              +K  
Sbjct: 2   RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--HIPLKHLERRDAESLKLLKEA 59

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH------VSNFGGGHMAWVQ 119
            + +K  +       + V C+ G  S  A   L             V +  GG MAW  
Sbjct: 60  IWEEKQGTQEGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAA 118

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 60.5 bits (147), Expect = 5e-13
 Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 21/126 (16%)

Query: 11  EVITVDVRAAKNLLESGYGYLDVRTAE-EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFL 69
            +    V A        Y  LDVR A  + K+  +  A    +P             D  
Sbjct: 16  YIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--AMPA-----------KDLA 62

Query: 70  KKVRSLCKEEDRLVVGCQSGARSLHATA--DLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 127
            ++  L   +   VV   +G  +L  TA   LL AGF+      G    W    L +   
Sbjct: 63  TRIGELDPAKT-YVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPL--- 117

Query: 128 EKPADH 133
           E    H
Sbjct: 118 EHHHHH 123

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466

 Score = 61.6 bits (149), Expect = 3e-12
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 9   GAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDF 68
               I      ++++  +    LDVR   E+  GH+  A   ++P+              
Sbjct: 369 PQSKIQTRSIHSEDITGNESHILDVRNDNEWNNGHLSQAV--HVPH-----------GKL 415

Query: 69  LKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
           L+      K +  + V CQSG RS  A   L   G+ ++ N   G+   
Sbjct: 416 LETDLPFNKNDV-IYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDI 463

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 58.6 bits (142), Expect = 4e-12
 Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 18/122 (14%)

Query: 6   KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN 65
           K    E    D+         G   +DVR AE +KE H+  A   +IP            
Sbjct: 12  KKLSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--SIPG----------- 58

Query: 66  PDFLKKVRSLCKEEDRLVV---GCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
            + + +  +    ++++++      +   +  A A     GF+ V    GG   W +   
Sbjct: 59  -NKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENG 116

Query: 123 KV 124
           +V
Sbjct: 117 EV 118

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Length = 588

 Score = 59.9 bits (146), Expect = 9e-12
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 11  EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 70
            V TV       ++E+G   +DVR   E K+G +  +   NIP               L 
Sbjct: 487 FVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSI--NIP---------------LD 529

Query: 71  KVRSLCKEEDR---LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
           ++R   +E      + + CQ G R   A   L+  G+K V N  GG   +
Sbjct: 530 ELRDRLEEVPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLY 578

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 55.0 bits (132), Expect = 1e-10
 Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 23/138 (16%)

Query: 6   KSSGAEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPY-MFNTPEGRV 63
            +    +  +       L        +DVR  E   +GH+  +   +     F       
Sbjct: 21  MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSL--HYASGSF------- 71

Query: 64  KNPDFLKKVRSLCKEEDRLVVGC-QSGARSLHATADLL--------GAGFKHVSNFGGGH 114
              D +  +    K++D LV     S  R       L+          G K++     G 
Sbjct: 72  --DDKISHLVQNVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGF 129

Query: 115 MAWVQNGLKV-KAREKPA 131
             W  +G  V +  E P 
Sbjct: 130 NGWEASGKPVCRCAEVPC 147

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Length = 565

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 21/97 (21%)

Query: 24  LESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDR-- 81
           L      LDVR   E + G ++ A   NIP               + ++R    E  +  
Sbjct: 483 LSEDQLLLDVRNPGELQNGGLEGAV--NIP---------------VDELRDRMHELPKDK 525

Query: 82  -LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
            +++  Q G R   A   L+  G++   N  GG+  +
Sbjct: 526 EIIIFSQVGLRGNVAYRQLVNNGYR-ARNLIGGYRTY 561

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile} Length = 134

 Score = 48.5 bits (115), Expect = 3e-08
 Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 26/125 (20%)

Query: 16  DVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV------------ 63
            ++  K L      ++DVRT  E++E H+  A   N+P   N     V            
Sbjct: 6   VIKIEKALKLDKVIFVDVRTEGEYEEDHILNA--INMPLFKNNEHNEVGTIYKMQGKHEA 63

Query: 64  ----------KNPDFLKKVRSLCKEEDRLVVGC-QSGARSLHATADLLGAGFKHVSNFGG 112
                     K  D   +   L    D +V+ C + G RS      L   G   V    G
Sbjct: 64  IQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGVN-VYQLEG 122

Query: 113 GHMAW 117
           G+ A+
Sbjct: 123 GYKAY 127

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 13  ITVDVRAAKNLLESGYGYL-DVRTAEEF-----------KEGHVDAAKI-----FNIPYM 55
           + +D+  A+ LL      L  +R+  EF            +G +  A+       +    
Sbjct: 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHME 331

Query: 56  FN-TPEGRVKNPDFLKKV--RSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112
               P+G +++ D +  +      K E ++   C +G R+          G+K+VS + G
Sbjct: 332 DFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDG 391

Query: 113 G 113
           G
Sbjct: 392 G 392

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 14/112 (12%)

Query: 13  ITVDVRAAKNLLESGYGYL-DVRTAEEF--------KEGHVDAAKIFNIPYMFN-TPEGR 62
            T         L +    + D R+ +E+        K GH+  A   N  +     P   
Sbjct: 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--NFEWTAAMDPSRA 204

Query: 63  VKNPDFLKKV--RSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112
           ++    +           +  +V  CQ+  RS          G+  V  + G
Sbjct: 205 LRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAG 256

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Length = 161

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 25/134 (18%)

Query: 4   TGKSSGAEVITVDVRAAKNLLESGYGY-------LDVRTAEEFKEGHVDAAKIFNIPYMF 56
            GK    + I+ ++    ++L   +         +D R   E++ GH+  A   N+    
Sbjct: 16  AGKHQDLKYISPEI--MASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--NLHMEE 71

Query: 57  NTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADL----------LGAGFKH 106
              +  +K P     V +  K    +     S  R       +              +  
Sbjct: 72  EVEDFLLKKP----IVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPE 127

Query: 107 VSNFGGGHMAWVQN 120
           +    GG+  +   
Sbjct: 128 LYVLKGGYKEFFMK 141

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 29/141 (20%)

Query: 6   KSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAA-------KIFNIPYMFNT 58
            S   E++    +  + +L   Y +L      E ++  +          +++N   +F  
Sbjct: 72  LSKQEEMVQ---KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF-- 126

Query: 59  PEGRVKNPDFLKKVRS-LC--KEEDRLVV----GCQSGARSLHATADLLGAGFKHVSNFG 111
            +  V       K+R  L   +    +++    G   G   +    D+    +K      
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS--GKTWV--ALDVC-LSYKVQCKMD 181

Query: 112 GGHMAWVQNGLKVKAREKPAD 132
              + W    L +K    P  
Sbjct: 182 FK-IFW----LNLKNCNSPET 197

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Length = 285

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 23/118 (19%)

Query: 16  DVRAAKNLLESGYGYL-DVRTAEEF----------------KEGHVDAAKIFNIPYMFN- 57
           DV      ++ G G L DVR+ +E+                + GH+  AK  NIP+    
Sbjct: 152 DVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--NIPWAKAV 209

Query: 58  TPEGRVKNPDFLKKV--RSLCKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGG 112
            P+G  K+ + L+ +       ++  +VV C+   RS H+   L    G+ HV N+ G
Sbjct: 210 NPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDG 267

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Length = 169

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 12/123 (9%)

Query: 8   SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPY--MFNTPEGRVKN 65
              E+           L   +  +DVR   ++  GH+      +  Y  +   PE   + 
Sbjct: 34  DPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--HYAYSRLKQDPEYLREL 90

Query: 66  PDFLKKVRSLCKEEDRLVVGCQSG-------ARSLHATADLLGAGFKHVSNFGGGHMAWV 118
              L + ++  +    ++  C          A  L  + D        +    GG   W 
Sbjct: 91  KHRLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQ 150

Query: 119 QNG 121
              
Sbjct: 151 SVY 153

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Length = 318

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 20/100 (20%)

Query: 31  LDVRTAEEF----------------KEGHVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVR 73
           +DVR+ EE+                + GH+  A   +IP+       GR ++ + L+++ 
Sbjct: 196 IDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--HIPWGKAADESGRFRSREELERLY 253

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGG 112
                +D+ VV C+ G RS H    L    G   V N+ G
Sbjct: 254 DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDG 293

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.96
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.96
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.96
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.95
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.95
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.95
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.95
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.95
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.95
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.95
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.94
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.93
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.93
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.93
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.93
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.92
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.91
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.91
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.91
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.9
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.9
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.9
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.9
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.9
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.9
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.89
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.89
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.89
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.89
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	99.89
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.89
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.89
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.89
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.88
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.88
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.88
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.88
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.88
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.88
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.88
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.88
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.87
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.87
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.87
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.87
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.86
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.86
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	99.86
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	99.86
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	99.85
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.85
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.84
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.82
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.82
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.81
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.81
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.8
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.8
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.78
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.78
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.76
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.76
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.74
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.5
2f46_A	156	Hypothetical protein; structural genomics, joint c	98.25
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	97.29
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	96.83
1ywf_A	296	Phosphotyrosine protein phosphatase PTPB; four str	96.39
1xri_A	151	AT1G05000; structural genomics, protein structure	96.32
2r0b_A	154	Serine/threonine/tyrosine-interacting protein; str	95.93
3rgo_A	157	Protein-tyrosine phosphatase mitochondrial 1; phos	95.8
1yz4_A	160	DUSP15, dual specificity phosphatase-like 15 isofo	95.6
1zzw_A	149	Dual specificity protein phosphatase 10; MKP, PTP,	95.45
2wgp_A	190	Dual specificity protein phosphatase 14; MKP6, DUS	95.45
1wrm_A	165	Dual specificity phosphatase 22; DSP, JNK, hydrola	95.34
2hcm_A	164	Dual specificity protein phosphatase; structural g	95.32
1fpz_A	212	Cyclin-dependent kinase inhibitor 3; alpha-beta sa	95.29
3ezz_A	144	Dual specificity protein phosphatase 4; alpha/beta	95.17
2nt2_A	145	Protein phosphatase slingshot homolog 2; alpha/bet	94.83
2esb_A	188	Dual specificity protein phosphatase 18; alpha/bet	94.61
2e0t_A	151	Dual specificity phosphatase 26; conserved hypothe	94.41
3s4e_A	144	Dual specificity protein phosphatase 19; PTP, prot	94.22
3f81_A	183	Dual specificity protein phosphatase 3; hydrolase,	94.11
2oud_A	177	Dual specificity protein phosphatase 10; A central	94.11
3s4o_A	167	Protein tyrosine phosphatase-like protein; structu	93.81
3rz2_A	189	Protein tyrosine phosphatase type IVA 1; tyrosine	93.76
2g6z_A	211	Dual specificity protein phosphatase 5; alpha/beta	93.72
2i6j_A	161	Ssoptp, sulfolobus solfataricus protein tyrosine p	93.67
2j16_A	182	SDP-1, tyrosine-protein phosphatase YIL113W; hydro	92.76
2hxp_A	155	Dual specificity protein phosphatase 9; human phos	92.57
3emu_A	161	Leucine rich repeat and phosphatase domain contain	92.56
1yn9_A	169	BVP, polynucleotide 5'-phosphatase; RNA triphospha	92.3
2pq5_A	205	Dual specificity protein phosphatase 13; hydrolase	91.7
1rxd_A	159	Protein tyrosine phosphatase type IVA, member 1; p	91.4
2y96_A	219	Dual specificity phosphatase DUPD1; hydrolase; 2.3	91.1
2q05_A	195	Late protein H1, dual specificity protein phosphat	89.88
1v8c_A	168	MOAD related protein; riken structural genomics/pr	89.83
1ohe_A	348	CDC14B, CDC14B2 phosphatase; protein phosphatase,	87.91
3nme_A	294	Ptpkis1 protein, SEX4 glucan phosphatase; dual spe	87.84
3cm3_A	176	Late protein H1, dual specificity protein phosphat	87.62
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	87.49
2c46_A	241	MRNA capping enzyme; phosphatase, transferase, hyd	87.42
2jgn_A	185	DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosp	85.06
2hjv_A	163	ATP-dependent RNA helicase DBPA; parallel alpha-be	81.74
1jzt_A	246	Hypothetical 27.5 kDa protein in SPX19-GCR2 inter	81.16
3rh0_A	148	Arsenate reductase; oxidoreductase; 1.72A {Coryneb	80.76
1jl3_A	139	Arsenate reductase; alpha-beta fold, PTP-loop, oxi	80.56

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.96  E-value=2.6e-29  Score=164.80  Aligned_cols=116  Identities=48%  Similarity=0.763  Sum_probs=101.5

Q ss_pred             CCCceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC
Q 032621            8 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ   87 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~   87 (137)
                      .......|+++++.++++.+.+|||||++.||..||||||  +|||+..+...+.+...++...+...++++++||+||.
T Consensus        13 ~~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgA--inip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~   90 (129)
T 1tq1_A           13 ESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQ   90 (129)
T ss_dssp             CSCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEES
T ss_pred             hcCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCc--EECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECC
Confidence            4456789999999999987789999999999999999999  99999665544555555777766655788999999999


Q ss_pred             CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 032621           88 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK  125 (137)
Q Consensus        88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~  125 (137)
                      +|.||..+++.|.+.||++|++|+||+.+|...++|++
T Consensus        91 ~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~  128 (129)
T 1tq1_A           91 SGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  128 (129)
T ss_dssp             SCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             CCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999875

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.96  E-value=1.3e-29  Score=160.47  Aligned_cols=99  Identities=28%  Similarity=0.400  Sum_probs=87.2

Q ss_pred             eeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           13 ITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        13 ~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      +.||++|+.+.+.++  ++|||||++.||..||||||  +|||+.           ++...+.+ ++++++||+||.+|.
T Consensus         2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivv~C~~G~   67 (103)
T 3iwh_A            2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNA--KLIPMD-----------TIPDNLNS-FNKNEIYYIVCAGGV   67 (103)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-CCTTSEEEEECSSSS
T ss_pred             CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCc--ccCccc-----------chhhhhhh-hcCCCeEEEECCCCH
Confidence            589999999988664  89999999999999999999  999996           44444444 488999999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      ||..++..|.+.||++ +.|.||+.+|.++|+|+++
T Consensus        68 rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pves  102 (103)
T 3iwh_A           68 RSAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIKS  102 (103)
T ss_dssp             HHHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred             HHHHHHHHHHHcCCCE-EEecChHHHHHHCCCccee
Confidence            9999999999999975 4799999999999999875

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.96  E-value=1.4e-28  Score=156.75  Aligned_cols=102  Identities=25%  Similarity=0.435  Sum_probs=92.2

Q ss_pred             eeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCch
Q 032621           12 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGAR   91 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~r   91 (137)
                      ++.|+++++.+++++ .+|||||++.||..||||||  +|+|+.           ++...+..+ +++++||+||.+|.|
T Consensus         3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l-~~~~~ivvyC~~G~r   67 (108)
T 3gk5_A            3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIANS--INIPIS-----------ELREKWKIL-ERDKKYAVICAHGNR   67 (108)
T ss_dssp             CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTC--EECCHH-----------HHHHHGGGS-CTTSCEEEECSSSHH
T ss_pred             ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhC-CCCCeEEEEcCCCcH
Confidence            568999999999988 99999999999999999999  999995           666666554 889999999999999


Q ss_pred             HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           92 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      |..+++.|++.|| +|++|+||+.+|.+.+.|+++...
T Consensus        68 s~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~  104 (108)
T 3gk5_A           68 SAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH  104 (108)
T ss_dssp             HHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred             HHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence            9999999999999 899999999999999999987654

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.95  E-value=2.6e-28  Score=155.38  Aligned_cols=104  Identities=23%  Similarity=0.355  Sum_probs=93.3

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ..++.|+++++.++++++ .+|||||++.||..||||||  +|||+.           ++...+.+ ++++++||+||.+
T Consensus         2 ~~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyc~~   67 (108)
T 1gmx_A            2 DQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQA--FHLTND-----------TLGAFMRD-NDFDTPVMVMCYH   67 (108)
T ss_dssp             CSCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTC--EECCHH-----------HHHHHHHH-SCTTSCEEEECSS
T ss_pred             CcccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccC--EeCCHH-----------HHHHHHHh-cCCCCCEEEEcCC
Confidence            356799999999998764 89999999999999999999  999995           66666665 4889999999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      |.||..+++.|++.||++|++|+||+.+|.+. +|++++.
T Consensus        68 g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~  106 (108)
T 1gmx_A           68 GNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY  106 (108)
T ss_dssp             SSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred             CchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence            99999999999999999999999999999998 9987643

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.95  E-value=1.3e-28  Score=154.83  Aligned_cols=97  Identities=23%  Similarity=0.334  Sum_probs=85.8

Q ss_pred             eeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           13 ITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        13 ~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      +.|+++++.+++++  +.+|||||++.||..||||||  +|+|+.           ++.+.+.. ++++++||+||.+|.
T Consensus         2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyC~~g~   67 (100)
T 3foj_A            2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGA--ETIPMN-----------SIPDNLNY-FNDNETYYIICKAGG   67 (100)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-SCTTSEEEEECSSSH
T ss_pred             CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHh-CCCCCcEEEEcCCCc
Confidence            57999999999853  489999999999999999999  999996           33333433 478899999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      ||..+++.|++.|| +|++|+||+.+|.+.|+|+
T Consensus        68 rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv  100 (100)
T 3foj_A           68 RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH  100 (100)
T ss_dssp             HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred             hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence            99999999999999 8999999999999999885

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.8e-28  Score=160.43  Aligned_cols=116  Identities=21%  Similarity=0.318  Sum_probs=96.4

Q ss_pred             CCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEE
Q 032621            9 GAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~   84 (137)
                      ......|+++++.+++++   +.+|||||++.||..||||||  +|+|+..+.........+|.+.+... ++++++||+
T Consensus        19 ~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivv   96 (139)
T 3d1p_A           19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPAS--INVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIF   96 (139)
T ss_dssp             -CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTC--EECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEE
T ss_pred             CCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCc--EEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEE
Confidence            456789999999999963   489999999999999999999  99999765322222233455555433 578899999


Q ss_pred             EeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           85 GCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        85 ~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      ||.+|.||..+++.|.+.||++|++|+||+.+|.+.|+|+.+
T Consensus        97 yC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  138 (139)
T 3d1p_A           97 YCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD  138 (139)
T ss_dssp             ECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred             ECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence            999999999999999999999999999999999999999764

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.95  E-value=8.6e-28  Score=152.63  Aligned_cols=98  Identities=28%  Similarity=0.437  Sum_probs=81.7

Q ss_pred             HHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHH
Q 032621           19 AAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHA   95 (137)
Q Consensus        19 ~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~   95 (137)
                      ++.++++.   +++|||||++.||..||||||  +|||+.           ++...+...++++++||+||.+|.||..+
T Consensus         2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a   68 (106)
T 3hix_A            2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQA   68 (106)
T ss_dssp             -----------CCEEEECSCHHHHHTCEETTC--EECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHH
T ss_pred             hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCC--EeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHH
Confidence            45666653   489999999999999999999  999995           56666655568899999999999999999


Q ss_pred             HHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           96 TADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        96 ~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      ++.|...||++|++|+||+.+|.++++|+.+...
T Consensus        69 ~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~  102 (106)
T 3hix_A           69 VNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH  102 (106)
T ss_dssp             HHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred             HHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence            9999999999999999999999999999987654

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.95  E-value=1.6e-27  Score=158.66  Aligned_cols=102  Identities=27%  Similarity=0.417  Sum_probs=92.0

Q ss_pred             eeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           14 TVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        14 ~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      .||++++.++++.   +++|||||++.||..||||||  +|||+.           ++...+...++++++||+||.+|.
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~   67 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDE   67 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTC--EECCGG-----------GHHHHHHTTSCTTSEEEEECSSHH
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCC--EEcCHH-----------HHHHHHHhcCCCCCeEEEEECCCh
Confidence            4789999999974   378999999999999999999  999995           666666555788999999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ||..+++.|...||++|++|+||+.+|.+.|+|+++..
T Consensus        68 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  105 (141)
T 3ilm_A           68 QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII  105 (141)
T ss_dssp             HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCC
Confidence            99999999999999999999999999999999998865

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.95  E-value=3.6e-27  Score=156.15  Aligned_cols=109  Identities=27%  Similarity=0.380  Sum_probs=93.5

Q ss_pred             ceeeeCHHHHHHHhh-C-CCEEEecCChHHHhc-cC--CCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEE
Q 032621           11 EVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GH--VDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVG   85 (137)
Q Consensus        11 ~~~~is~~~~~~~~~-~-~~~viDvR~~~e~~~-g~--ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~   85 (137)
                      .+..|+++++.++++ . +.+|||||++.||.. ||  ||||  +|||+..+         .....+.. ++++++||+|
T Consensus        21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgA--inip~~~l---------~~~~~~~~-l~~~~~ivvy   88 (137)
T 1qxn_A           21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNY--KHMSRGKL---------EPLLAKSG-LDPEKPVVVF   88 (137)
T ss_dssp             SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSE--EECCTTTS---------HHHHHHHC-CCTTSCEEEE
T ss_pred             cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCC--EEcchHHh---------hhHHhhcc-CCCCCeEEEE
Confidence            467899999999997 4 489999999999999 99  9999  99998522         11113333 5889999999


Q ss_pred             eCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 032621           86 CQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA  131 (137)
Q Consensus        86 c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~~  131 (137)
                      |.+|.||..+++.|++.||++|++|+||+.+|.+.++|++++..+.
T Consensus        89 C~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~  134 (137)
T 1qxn_A           89 CKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHHH  134 (137)
T ss_dssp             CCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCCCC
T ss_pred             cCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccccc
Confidence            9999999999999999999999999999999999999999866543

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.94  E-value=6.5e-27  Score=154.86  Aligned_cols=107  Identities=22%  Similarity=0.368  Sum_probs=89.7

Q ss_pred             CceeeeCHHHHHHHhh--C-CCEEEecCChHHHhc-cCCCCceeeCccccccCCCCCCCChHHHHHHH-------hhccC
Q 032621           10 AEVITVDVRAAKNLLE--S-GYGYLDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR-------SLCKE   78 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~--~-~~~viDvR~~~e~~~-g~ipga~~inip~~~~~~~~~~~~~~~~~~~~-------~~~~~   78 (137)
                      ..+..|+++++.++++  . +.+|||||++.||.. ||||||  +|||+..           +...+.       ..+++
T Consensus        19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~~ip~~~-----------l~~~~~~~~~~~~~~~~~   85 (139)
T 2hhg_A           19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGS--FSCTRGM-----------LEFWIDPQSPYAKPIFQE   85 (139)
T ss_dssp             TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTC--EECCGGG-----------HHHHHCTTSTTCCGGGGS
T ss_pred             HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCe--EECChHH-----------HHHhcCccchhhhccCCC
Confidence            4468999999999998  3 488999999999999 999999  9999863           222221       12478


Q ss_pred             CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      +++||+||.+|.||..+++.|+..||++|++|+||+.+|.+.++|++++.+
T Consensus        86 ~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  136 (139)
T 2hhg_A           86 DKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP  136 (139)
T ss_dssp             SSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred             CCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence            899999999999999999999999999999999999999999999987644

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.93  E-value=5.2e-27  Score=149.94  Aligned_cols=99  Identities=19%  Similarity=0.347  Sum_probs=85.6

Q ss_pred             eeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCch
Q 032621           13 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGAR   91 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~r   91 (137)
                      ..|+++++.   ..+.+|||||++.||..||||||  +|+|+.           ++...+... ++++++||+||++|.|
T Consensus         5 ~~is~~el~---~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~~~~~~~~ivvyC~~G~r   68 (110)
T 2k0z_A            5 YAISLEEVN---FNDFIVVDVRELDEYEELHLPNA--TLISVN-----------DQEKLADFLSQHKDKKVLLHCRAGRR   68 (110)
T ss_dssp             TEEETTTCC---GGGSEEEEEECHHHHHHSBCTTE--EEEETT-----------CHHHHHHHHHSCSSSCEEEECSSSHH
T ss_pred             eeeCHHHhc---cCCeEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhcccCCCCEEEEEeCCCch
Confidence            467777762   34589999999999999999999  999995           455555543 6889999999999999


Q ss_pred             HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           92 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      |..+++.|...||++ ++|+||+.+|.+.++|++++.
T Consensus        69 s~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~  104 (110)
T 2k0z_A           69 ALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD  104 (110)
T ss_dssp             HHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred             HHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence            999999999999999 999999999999999998754

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.93  E-value=5.5e-26  Score=148.00  Aligned_cols=100  Identities=23%  Similarity=0.341  Sum_probs=89.3

Q ss_pred             eeeCHHHHHHHhhCC---CEEEecCChHHH-hccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           13 ITVDVRAAKNLLESG---YGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        13 ~~is~~~~~~~~~~~---~~viDvR~~~e~-~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ..|+++++.++++++   .+|||||++.|| ..||||||  +|||+.           ++...+.. ++++++||+||.+
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~nip~~-----------~l~~~~~~-l~~~~~ivvyC~~   80 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGA--IAMPAK-----------DLATRIGE-LDPAKTYVVYDWT   80 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTC--EECCHH-----------HHHHHGGG-SCTTSEEEEECSS
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCeEEEEeCC
Confidence            579999999998763   799999999998 99999999  999995           66666655 4889999999999


Q ss_pred             Cch--HHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 032621           89 GAR--SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR  127 (137)
Q Consensus        89 g~r--a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~  127 (137)
                      |.|  |..+++.|++.||+ |++|+||+.+|...++|+.+.
T Consensus        81 g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~  120 (124)
T 3flh_A           81 GGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH  120 (124)
T ss_dssp             SSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred             CCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence            998  89999999999997 999999999999999998764

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.93  E-value=4.2e-26  Score=152.20  Aligned_cols=103  Identities=23%  Similarity=0.324  Sum_probs=88.5

Q ss_pred             eeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           13 ITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        13 ~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      ..|+++++.+.++++   .+|||||++.||..||||||  +|||+..+...          .+. .++++++||+||.+|
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~~l~~~----------~~~-~l~~~~~ivvyC~~g   82 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTA--ISIPGNKINED----------TTK-RLSKEKVIITYCWGP   82 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTC--EECCGGGCSTT----------TTT-TCCTTSEEEEECSCT
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCC--EECCHHHHhHH----------HHh-hCCCCCeEEEEECCC
Confidence            478999999999764   78999999999999999999  99999643211          122 257889999999998


Q ss_pred             --chHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           90 --ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        90 --~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                        .||..+++.|+..|| +|++|+||+.+|.+.|+|+++...
T Consensus        83 ~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~  123 (144)
T 3nhv_A           83 ACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG  123 (144)
T ss_dssp             TCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred             CccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence              799999999999999 599999999999999999988653

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.93  E-value=5.3e-27  Score=145.88  Aligned_cols=93  Identities=26%  Similarity=0.233  Sum_probs=76.8

Q ss_pred             eeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchH
Q 032621           13 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS   92 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra   92 (137)
                      +.|+++++.++++++.+|||||++.||..||||||  +|+|+..           +...+.. +++ ++||+||++|.||
T Consensus         2 ~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gA--i~ip~~~-----------l~~~~~~-l~~-~~ivvyC~~g~rs   66 (94)
T 1wv9_A            2 RKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAA--EWVPLEK-----------IQKGEHG-LPR-RPLLLVCEKGLLS   66 (94)
T ss_dssp             CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCC--EECCHHH-----------HTTTCCC-CCS-SCEEEECSSSHHH
T ss_pred             CcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCC--EECCHHH-----------HHHHHHh-CCC-CCEEEEcCCCChH
Confidence            57899999999887899999999999999999999  9999963           3322323 467 9999999999999


Q ss_pred             HHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           93 LHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      ..+++.|++.||+ |++|+||+.+|.+.|
T Consensus        67 ~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           67 QVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             HHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             HHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence            9999999999999 999999999997654

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=2.7e-25  Score=148.76  Aligned_cols=113  Identities=23%  Similarity=0.319  Sum_probs=90.5

Q ss_pred             ceeeeCHHHHHHHhhC--CCEEEecCChHHHhc-cCC------CCceeeCccccccCCCCCCCChHHHHHHHhh-----c
Q 032621           11 EVITVDVRAAKNLLES--GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-----C   76 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~--~~~viDvR~~~e~~~-g~i------pga~~inip~~~~~~~~~~~~~~~~~~~~~~-----~   76 (137)
                      -...|+++++.+++++  +.+|||||++.||.. |||      |||  +|||+..  ..... .+.|...+...     +
T Consensus         3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgA--v~ip~~~--~~~~~-~~~~~~~l~~~l~~~~~   77 (148)
T 2fsx_A            3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREV--VYVEWAT--SDGTH-NDNFLAELRDRIPADAD   77 (148)
T ss_dssp             CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCC--EECCSBC--TTSCB-CTTHHHHHHHHCC----
T ss_pred             ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCc--EEeeeec--ccccc-CHHHHHHHHHHHhhccC
Confidence            3468999999999874  589999999999997 999      999  9999975  11111 23455555543     3


Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH------------HHHHhCCCceecCC
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH------------MAWVQNGLKVKARE  128 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~------------~~w~~~~~p~~~~~  128 (137)
                      +++++||+||++|.||..+++.|...||++|++|+||+            .+|.+.|+|++...
T Consensus        78 ~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~  141 (148)
T 2fsx_A           78 QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR  141 (148)
T ss_dssp             ---CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred             CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence            78899999999999999999999999999999999999            68999999988754

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.91  E-value=2e-24  Score=141.50  Aligned_cols=104  Identities=26%  Similarity=0.368  Sum_probs=80.2

Q ss_pred             ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCC----------------------CCCChHH
Q 032621           11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG----------------------RVKNPDF   68 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~----------------------~~~~~~~   68 (137)
                      .+..|+++++.+  ..+.+|||||++.||..||||||  +|||+..+....                      ....+++
T Consensus         3 ~~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (134)
T 3g5j_A            3 AMSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNA--INMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDI   78 (134)
T ss_dssp             --CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTC--EECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHH
T ss_pred             CccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCC--EEcCccchhhhhcccceeeecChhHHHhcccccccccHHHH
Confidence            357899999977  45689999999999999999999  999995211000                      0000134


Q ss_pred             HHHHHhhccCC-CcEEEEe-CCCchHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           69 LKKVRSLCKEE-DRLVVGC-QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        69 ~~~~~~~~~~~-~~iv~~c-~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      ...+..+ +++ ++||+|| .+|.||..+++.|+.+|| +|++|+||+.+|.+.
T Consensus        79 ~~~~~~~-~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           79 YLQAAEL-ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             HHHHHHH-HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             HHHHHHh-ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            4444443 677 8999999 589999999999999999 899999999999764

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.91  E-value=6.5e-25  Score=147.63  Aligned_cols=109  Identities=19%  Similarity=0.261  Sum_probs=89.7

Q ss_pred             CceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC-
Q 032621           10 AEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ-   87 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~-   87 (137)
                      ..+..|+++++.+++++ +.+|||||++.||..||||||  +|||+..+.        +....+...++++++||+||+ 
T Consensus        25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgA--inip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~   94 (152)
T 1t3k_A           25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGS--LHYASGSFD--------DKISHLVQNVKDKDTLVFHSAL   94 (152)
T ss_dssp             SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSS--EEECCSSSS--------TTHHHHHHTCCSCCEEEESSSC
T ss_pred             CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCC--EECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCC
Confidence            45689999999988864 488999999999999999999  999996432        112333222478899999999 


Q ss_pred             CCchHHHHHHHHHH--------CCccceeeccccHHHHHhCCCceecCC
Q 032621           88 SGARSLHATADLLG--------AGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        88 ~g~ra~~~~~~l~~--------~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      +|.|+..++..|.+        .||++|++|+||+.+|.+.++|+++..
T Consensus        95 ~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  143 (152)
T 1t3k_A           95 SQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA  143 (152)
T ss_dssp             CSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred             CCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence            99999888887743        899999999999999999999998754

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.91  E-value=8.4e-24  Score=153.66  Aligned_cols=115  Identities=17%  Similarity=0.158  Sum_probs=98.3

Q ss_pred             eeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHHHHhh-ccCCCcEEE
Q 032621           13 ITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus        13 ~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~~~~~-~~~~~~iv~   84 (137)
                      +.|+++++.+++++ +.+|||||++.||..||||||  +|+|+..+...     ..+ +...|.+.+.++ ++++++||+
T Consensus         9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA--~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv   86 (271)
T 1e0c_A            9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGA--RFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVV   86 (271)
T ss_dssp             SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTC--EECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEE
T ss_pred             ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCC--EECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence            48999999999865 589999999999999999999  99998765322     122 234677777776 789999999


Q ss_pred             EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      ||.+|. +|..+++.|+.+||++|++|+||+.+|...++|+++...
T Consensus        87 yc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~  132 (271)
T 1e0c_A           87 YDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (271)
T ss_dssp             ECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             EcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence            999988 999999999999999999999999999999999987654

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.90  E-value=2.3e-24  Score=142.04  Aligned_cols=110  Identities=22%  Similarity=0.273  Sum_probs=91.2

Q ss_pred             eeeeCHHHHHHHhhC--CCEEEecCChHHHhc-cCC------CCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCC
Q 032621           12 VITVDVRAAKNLLES--GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEED   80 (137)
Q Consensus        12 ~~~is~~~~~~~~~~--~~~viDvR~~~e~~~-g~i------pga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~   80 (137)
                      ...|+++++.+++++  +.+|||||++.||.. +|+      |||  +|||+..+      ....|...+....  ++++
T Consensus         4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga--~~ip~~~~------~~~~~~~~l~~~~~~~~~~   75 (134)
T 1vee_A            4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKA--VSTVYNGE------DKPGFLKKLSLKFKDPENT   75 (134)
T ss_dssp             SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCC--EECCCCGG------GHHHHHHHHHTTCSCGGGC
T ss_pred             CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCce--EEeecccc------cChhHHHHHHHHhCCCCCC
Confidence            457999999999873  489999999999986 444      799  99998532      1234666665543  6889


Q ss_pred             cEEEEeCCCchHHHHHHHHHHCCccceeeccccH---HHHHhCCCceecCCC
Q 032621           81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH---MAWVQNGLKVKAREK  129 (137)
Q Consensus        81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~---~~w~~~~~p~~~~~~  129 (137)
                      +||+||++|.||..++..|.++||++|+.|.||+   .+|.+.++|++++..
T Consensus        76 ~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~  127 (134)
T 1vee_A           76 TLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK  127 (134)
T ss_dssp             EEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred             EEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence            9999999999999999999999999999999999   789999999987654

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.90  E-value=1.4e-24  Score=141.22  Aligned_cols=105  Identities=28%  Similarity=0.258  Sum_probs=82.1

Q ss_pred             eeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH----HHhh-----ccCCCc
Q 032621           13 ITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK----VRSL-----CKEEDR   81 (137)
Q Consensus        13 ~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~   81 (137)
                      .+|+++++.++++++  .+|||||++.||..||||||  +|||+..+....    ..+...    +...     ++++++
T Consensus         1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~   74 (127)
T 3i2v_A            1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHA--LHIPLKHLERRD----AESLKLLKEAIWEEKQGTQEGAAVP   74 (127)
T ss_dssp             CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTS--EECCHHHHHTTC----HHHHHHHHHHHHHHHTTC---CCEE
T ss_pred             CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCc--eeCChHHHhhhh----hhhHHHHHHHHhhhcccccCCCCCe
Confidence            368999999999764  89999999999999999999  999996542211    122222    2111     233459


Q ss_pred             EEEEeCCCchHHHHHHHHHHC------CccceeeccccHHHHHhCCCc
Q 032621           82 LVVGCQSGARSLHATADLLGA------GFKHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus        82 iv~~c~~g~ra~~~~~~l~~~------G~~~v~~l~GG~~~w~~~~~p  123 (137)
                      ||+||.+|.||..++++|.+.      |+.+|++|+||+.+|.+...|
T Consensus        75 ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~  122 (127)
T 3i2v_A           75 IYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG  122 (127)
T ss_dssp             EEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred             EEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence            999999999999999999998      688999999999999886554

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.90  E-value=1.3e-23  Score=153.36  Aligned_cols=115  Identities=20%  Similarity=0.262  Sum_probs=98.1

Q ss_pred             eeeCHHHHHHHhhC-CCEEEecC----------ChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHHHHhh
Q 032621           13 ITVDVRAAKNLLES-GYGYLDVR----------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKKVRSL   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~-~~~viDvR----------~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~~~~~   75 (137)
                      ..|+++++.+++++ +.+|||||          ++.||..||||||  +|+|+..+...     ..+ +...|.+.+..+
T Consensus         4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgA--i~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   81 (280)
T 1urh_A            4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGA--VFFDIEALSDHTSPLPHMLPRPETFAVAMREL   81 (280)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC--EECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred             ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCC--EECCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence            58999999999875 58999999          7899999999999  99998755321     122 235677778776


Q ss_pred             -ccCCCcEEEEeCCCch-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           76 -CKEEDRLVVGCQSGAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        76 -~~~~~~iv~~c~~g~r-a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                       ++++++||+||++|.+ |..+++.|+.+||++|++|+||+.+|.+.++|+++...
T Consensus        82 gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  137 (280)
T 1urh_A           82 GVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV  137 (280)
T ss_dssp             TCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred             CCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence             7899999999999998 99999999999999999999999999999999987654

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.90  E-value=9.6e-24  Score=153.33  Aligned_cols=112  Identities=19%  Similarity=0.287  Sum_probs=94.5

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHh--------ccCCCCceeeCccccccCCC--CCCCChHHHHHHHhh-ccCCC
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFNTPE--GRVKNPDFLKKVRSL-CKEED   80 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~--------~g~ipga~~inip~~~~~~~--~~~~~~~~~~~~~~~-~~~~~   80 (137)
                      ..|+++++.+.++++ .+|||||++.||.        .||||||  +|+|+..+...  ......++.+.+... +++++
T Consensus       147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  224 (271)
T 1e0c_A          147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGITPDK  224 (271)
T ss_dssp             TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTS
T ss_pred             ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCc--eeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence            468999999998764 8899999999999        8999999  99999765211  122224666667654 78999


Q ss_pred             cEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceec
Q 032621           81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKA  126 (137)
Q Consensus        81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~  126 (137)
                      +||+||++|.||..+++.|..+||++|++|+||+.+|.+. ++|+++
T Consensus       225 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~  271 (271)
T 1e0c_A          225 EIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL  271 (271)
T ss_dssp             EEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred             CEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence            9999999999999999999999999999999999999988 898763

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.90  E-value=4.1e-24  Score=130.42  Aligned_cols=76  Identities=30%  Similarity=0.516  Sum_probs=69.1

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccc
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKH  106 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~  106 (137)
                      .+|||||++.||..||||||  +|+|+.           ++.+.+.++ ++++++||+||++|.||..+++.|.+.||++
T Consensus         2 ~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~   68 (85)
T 2jtq_A            2 EHWIDVRVPEQYQQEHVQGA--INIPLK-----------EVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTH   68 (85)
T ss_dssp             EEEEECSCHHHHTTEEETTC--EECCHH-----------HHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSS
T ss_pred             CEEEECCCHHHHHhCCCCCC--EEcCHH-----------HHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCC
Confidence            57999999999999999999  999995           666666665 5788999999999999999999999999999


Q ss_pred             eeeccccHHHH
Q 032621          107 VSNFGGGHMAW  117 (137)
Q Consensus       107 v~~l~GG~~~w  117 (137)
                      |+++ ||+.+|
T Consensus        69 v~~l-GG~~~w   78 (85)
T 2jtq_A           69 VENA-GGLKDI   78 (85)
T ss_dssp             EEEE-EETTTC
T ss_pred             EEec-cCHHHH
Confidence            9999 998888

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.90  E-value=3.2e-23  Score=154.15  Aligned_cols=115  Identities=13%  Similarity=0.152  Sum_probs=96.4

Q ss_pred             eeeeCHHHHHHHhhC-CCEEEecCChHH-HhccCCCCceeeCcccccc---CCCCCC-CChHHHHHHHhh-ccCCCcEEE
Q 032621           12 VITVDVRAAKNLLES-GYGYLDVRTAEE-FKEGHVDAAKIFNIPYMFN---TPEGRV-KNPDFLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-~~~viDvR~~~e-~~~g~ipga~~inip~~~~---~~~~~~-~~~~~~~~~~~~-~~~~~~iv~   84 (137)
                      ...|+++++.+++++ +.+|||||+..| |..||||||  +|+|+...   .....+ +..+|...+.++ ++++++||+
T Consensus        39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGA--i~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVv  116 (318)
T 3hzu_A           39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGA--VKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVI  116 (318)
T ss_dssp             GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTE--EECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred             CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCC--eEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence            457999999999965 489999999876 999999999  99997421   111222 224677788776 889999999


Q ss_pred             EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ||++|. +|.++++.|+.+||++|++|+||+.+|.+.|+|+++..
T Consensus       117 yc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  161 (318)
T 3hzu_A          117 YGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDV  161 (318)
T ss_dssp             ECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCC
T ss_pred             ECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCC
Confidence            999887 99999999999999999999999999999999998754

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.89  E-value=2.5e-23  Score=151.89  Aligned_cols=114  Identities=21%  Similarity=0.326  Sum_probs=86.5

Q ss_pred             ceeeeCHHHHHHHhhC-CCEEEecCChHHH-----------hccCCCCceeeCccccccCCCCCCCCh-HHHHHHHhh-c
Q 032621           11 EVITVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNTPEGRVKNP-DFLKKVRSL-C   76 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~-~~~viDvR~~~e~-----------~~g~ipga~~inip~~~~~~~~~~~~~-~~~~~~~~~-~   76 (137)
                      ....|+++++.+++++ +.+|||||++.||           ..||||||  +|||+..+...+.+... ++.+.+... +
T Consensus       150 ~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA--~nip~~~~~~~~~~~~~~~l~~~~~~~~~  227 (280)
T 1urh_A          150 PEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGV  227 (280)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTC--EECCGGGGBSSSSBCCHHHHHHHHHTTTC
T ss_pred             cccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCc--eEeeHHHhhcCCccCCHHHHHHHHHHcCC
Confidence            3456999999999875 4899999999999           68999999  99999876544333333 344444433 6


Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceec
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKA  126 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~  126 (137)
                      +++++||+||.+|.||..++..|..+||++|++|+||+.+|.+. ++|+++
T Consensus       228 ~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~  278 (280)
T 1urh_A          228 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP  278 (280)
T ss_dssp             CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred             CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence            88999999999999999999999999999999999999999874 899875

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.89  E-value=1e-22  Score=149.90  Aligned_cols=116  Identities=17%  Similarity=0.325  Sum_probs=96.5

Q ss_pred             eeeeCHHHHHHHhhC-CCEEEecCChHHH------------hccCCCCceeeCccccccCC-CCCCCC-hHHHHHHHhh-
Q 032621           12 VITVDVRAAKNLLES-GYGYLDVRTAEEF------------KEGHVDAAKIFNIPYMFNTP-EGRVKN-PDFLKKVRSL-   75 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-~~~viDvR~~~e~------------~~g~ipga~~inip~~~~~~-~~~~~~-~~~~~~~~~~-   75 (137)
                      ...|+++++.+.+++ +.+|||||++.||            ..||||||  +|||+..+.. .+.+.. .++.+.+... 
T Consensus       159 ~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA--~nip~~~l~~~~~~~~~~~~l~~~~~~~~  236 (296)
T 1rhs_A          159 SLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGS--VNMPFMNFLTEDGFEKSPEELRAMFEAKK  236 (296)
T ss_dssp             GGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTC--EECCGGGGBCTTSCBCCHHHHHHHHHHTT
T ss_pred             ceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCC--EeecHHHhcCCCCcCCCHHHHHHHHHHcC
Confidence            468999999998875 4899999999999            78999999  9999976632 333333 3444445443 


Q ss_pred             ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCC
Q 032621           76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREK  129 (137)
Q Consensus        76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~~~  129 (137)
                      ++++++||+||++|.||..++..|..+||++|++|+||+.+|.+ .++|+++...
T Consensus       237 ~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~~  291 (296)
T 1rhs_A          237 VDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQG  291 (296)
T ss_dssp             CCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred             CCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCCC
Confidence            68899999999999999999999999999999999999999988 7999987653

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.89  E-value=5.6e-23  Score=152.82  Aligned_cols=116  Identities=28%  Similarity=0.448  Sum_probs=96.0

Q ss_pred             eeeCHHHHHHHhhCCCEEEecCChHHHhc----------------cCCCCceeeCcccccc-CCCCCCCChHHHHHHHhh
Q 032621           13 ITVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVRSL   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~----------------g~ipga~~inip~~~~-~~~~~~~~~~~~~~~~~~   75 (137)
                      ..++++++.+.++++ +|||||++.||..                ||||||  +|||+..+ ++.+.+...+........
T Consensus       179 ~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA--~niP~~~~~~~~g~~~~~~~l~~~~~~  255 (318)
T 3hzu_A          179 IRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTA--VHIPWGKAADESGRFRSREELERLYDF  255 (318)
T ss_dssp             TBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHTTT
T ss_pred             ccccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCCCe--eecCHHHhcCCCCcCCCHHHHHHHhcC
Confidence            468899999999886 9999999999998                999999  99999754 444555443333333233


Q ss_pred             ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecCCCCC
Q 032621           76 CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAREKPA  131 (137)
Q Consensus        76 ~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~~~w~~-~~~p~~~~~~~~  131 (137)
                      ++++++||+||++|.||..++..|.+ +||++|++|+||+.+|.+ .++|++++..+.
T Consensus       256 l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~~~  313 (318)
T 3hzu_A          256 INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPG  313 (318)
T ss_dssp             CCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSSCC
T ss_pred             CCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCCCC
Confidence            68899999999999999999999997 999999999999999995 699999876443

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.89  E-value=5.3e-23  Score=139.17  Aligned_cols=107  Identities=14%  Similarity=0.238  Sum_probs=89.0

Q ss_pred             CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHH-Hh---hcc
Q 032621            9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV-RS---LCK   77 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~-~~---~~~   77 (137)
                      ...++.|+++++.+++++       +.+|||||++.||..||||||  +|||+.           ++.... ..   +++
T Consensus        19 ~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~-----------~~~~~~~~~~~~~~~   85 (161)
T 1c25_A           19 HQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGA--VNLHME-----------EEVEDFLLKKPIVPT   85 (161)
T ss_dssp             CTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHTTTSCCCCC
T ss_pred             CCCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCc--EeCChh-----------HHHHHHHhhhhhccC
Confidence            345789999999999975       478999999999999999999  999995           444333 21   135


Q ss_pred             CCCcE--EEEeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621           78 EEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        78 ~~~~i--v~~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ++++|  |+||. +|.||..++..|++          +||++|++|+||+.+|.+.+.|+..+.
T Consensus        86 ~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~  149 (161)
T 1c25_A           86 DGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP  149 (161)
T ss_dssp             TTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred             CCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence            67776  67899 99999999999986          499999999999999999999888764

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=99.89  E-value=8.5e-23  Score=161.07  Aligned_cols=107  Identities=18%  Similarity=0.246  Sum_probs=94.5

Q ss_pred             CCceeeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEE
Q 032621            9 GAEVITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVG   85 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~   85 (137)
                      +..++.|+++++.+++++  +.+|||||++.||..||||||  +|||+.           +|...+..+ ++++++||+|
T Consensus         3 ~~~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgA--v~ip~~-----------~~~~~~~~l~~~~~~~iVvy   69 (539)
T 1yt8_A            3 LSQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFA--ANLPLS-----------RLELEIHARVPRRDTPITVY   69 (539)
T ss_dssp             ---CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTC--EECCGG-----------GHHHHHHHHSCCTTSCEEEE
T ss_pred             CCcCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHhhCCCCCCeEEEE
Confidence            345789999999999975  489999999999999999999  999995           677777766 4578999999


Q ss_pred             eCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           86 CQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        86 c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      |++|.+|..+++.|+.+||++|++|+||+.+|.+.|+|++++.
T Consensus        70 c~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  112 (539)
T 1yt8_A           70 DDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDV  112 (539)
T ss_dssp             CSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSS
T ss_pred             ECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCC
Confidence            9999999999999999999999999999999999999997653

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.89  E-value=1.1e-22  Score=148.65  Aligned_cols=113  Identities=26%  Similarity=0.432  Sum_probs=94.3

Q ss_pred             eeeCHHHHHHHhh----CCCEEEecCChHHHh----------------ccCCCCceeeCccccccC-CCCCCCC-hHHHH
Q 032621           13 ITVDVRAAKNLLE----SGYGYLDVRTAEEFK----------------EGHVDAAKIFNIPYMFNT-PEGRVKN-PDFLK   70 (137)
Q Consensus        13 ~~is~~~~~~~~~----~~~~viDvR~~~e~~----------------~g~ipga~~inip~~~~~-~~~~~~~-~~~~~   70 (137)
                      ..|+++++.+.++    .+..|||||++.||.                .||||||  +|+|+..+. ..+.+.+ .++.+
T Consensus       146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~  223 (285)
T 1uar_A          146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGA--KNIPWAKAVNPDGTFKSAEELRA  223 (285)
T ss_dssp             GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHH
T ss_pred             eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCc--cccCHHHhcCCCCcCCCHHHHHH
Confidence            5699999999984    446799999999997                7999999  999987653 2333333 34555


Q ss_pred             HHHhh-ccCCCcEEEEeCCCchHHHHHHHHH-HCCccceeeccccHHHHH-hCCCceecC
Q 032621           71 KVRSL-CKEEDRLVVGCQSGARSLHATADLL-GAGFKHVSNFGGGHMAWV-QNGLKVKAR  127 (137)
Q Consensus        71 ~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~-~~G~~~v~~l~GG~~~w~-~~~~p~~~~  127 (137)
                      .+... ++++++||+||++|.||..+++.|. .+||++|++|+||+.+|. ..++|++++
T Consensus       224 ~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  283 (285)
T 1uar_A          224 LYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG  283 (285)
T ss_dssp             HHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred             HHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence            66554 6889999999999999999999999 999999999999999998 689999874

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.89  E-value=1.8e-22  Score=148.59  Aligned_cols=115  Identities=21%  Similarity=0.222  Sum_probs=96.2

Q ss_pred             eeeeCHHHHHHHhhC-----CCEEEecC--------ChHHHhccCCCCceeeCccccccCCC-----CCCC-ChHHHHHH
Q 032621           12 VITVDVRAAKNLLES-----GYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVK-NPDFLKKV   72 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-----~~~viDvR--------~~~e~~~g~ipga~~inip~~~~~~~-----~~~~-~~~~~~~~   72 (137)
                      -+.|+++++.+++++     +.+|||||        ++.||..||||||  +|+|+..+...     ..+. ...|.+.+
T Consensus         7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~l~~~~~~~~~~lp~~~~~~~~l   84 (296)
T 1rhs_A            7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGA--SFFDIEECRDKASPYEVMLPSEAGFADYV   84 (296)
T ss_dssp             CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTC--EECCTTTSSCTTSSSSSCCCCHHHHHHHH
T ss_pred             CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCC--EEeCHHHhcCCCCCCCCCCCCHHHHHHHH
Confidence            358999999999975     58899999        6899999999999  99998754321     1222 24677777


Q ss_pred             Hhh-ccCCCcEEEEeCC--Cch-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           73 RSL-CKEEDRLVVGCQS--GAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        73 ~~~-~~~~~~iv~~c~~--g~r-a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ..+ ++++++||+||.+  |.+ |.++++.|+.+||++|++|+||+.+|.+.++|+++..
T Consensus        85 ~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  144 (296)
T 1rhs_A           85 GSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP  144 (296)
T ss_dssp             HHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred             HHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence            766 7889999999998  876 8899999999999999999999999999999998764

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.89  E-value=9.3e-23  Score=150.65  Aligned_cols=111  Identities=23%  Similarity=0.337  Sum_probs=93.2

Q ss_pred             eeeeCHHHHHHHhhC-CCEEEecCChHHH-----------hccCCCCceeeCccccccC-CCCCCC-ChHHHHHHHhh-c
Q 032621           12 VITVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNT-PEGRVK-NPDFLKKVRSL-C   76 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-~~~viDvR~~~e~-----------~~g~ipga~~inip~~~~~-~~~~~~-~~~~~~~~~~~-~   76 (137)
                      ...++++++.+.+++ +.+|||||++.||           ..||||||  +|||+..+. ..+.+. ..++.+.+... +
T Consensus       174 ~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~l~~~~~~~~~  251 (302)
T 3olh_A          174 AFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGT--VNIPFTDFLSQEGLEKSPEEIRHLFQEKKV  251 (302)
T ss_dssp             GGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTC--EECCGGGGBCSSSCBCCHHHHHHHHHHTTC
T ss_pred             cceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCc--eecCHHHhcCCCCccCCHHHHHHHHHhcCC
Confidence            357899999998875 4899999999999           78999999  999998763 333333 34555555554 7


Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      +++++||+||++|.||..++..|..+||++|++|+||+.+|.+.++|.
T Consensus       252 ~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~  299 (302)
T 3olh_A          252 DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE  299 (302)
T ss_dssp             CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred             CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence            889999999999999999999999999999999999999999888764

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.88  E-value=1.9e-22  Score=142.14  Aligned_cols=107  Identities=15%  Similarity=0.254  Sum_probs=89.0

Q ss_pred             CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH-HHh--hc--
Q 032621            9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC--   76 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~-~~~--~~--   76 (137)
                      ...+..|+++++.+++++       +.+|||||++.||..||||||  +|||+.           ++... +..  .+  
T Consensus        40 ~~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGA--inip~~-----------~l~~~~~~~~~~l~~  106 (211)
T 1qb0_A           40 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPC  106 (211)
T ss_dssp             STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHTTTCCCS
T ss_pred             cCCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCC--EECCch-----------HHHHHhhhhhhhccc
Confidence            356789999999999975       478999999999999999999  999995           33332 321  22  


Q ss_pred             cCCCcE--EEEeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621           77 KEEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        77 ~~~~~i--v~~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      +++++|  |+||. +|.||..+++.|.+          +||++|++|+||+.+|.+.+.|+..+.
T Consensus       107 ~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~~  171 (211)
T 1qb0_A          107 SLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ  171 (211)
T ss_dssp             STTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred             cCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCCC
Confidence            367887  78899 99999999999986          699999999999999999999886643

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.88  E-value=2.6e-22  Score=148.21  Aligned_cols=115  Identities=17%  Similarity=0.165  Sum_probs=94.9

Q ss_pred             eeeeCHHHHHHHhhC-----CCEEEecC---------ChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHH
Q 032621           12 VITVDVRAAKNLLES-----GYGYLDVR---------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKK   71 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-----~~~viDvR---------~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~   71 (137)
                      .+.|+++++.+++++     +.+|||||         +..||..||||||  +|||+..+...     ..+ ....|.+.
T Consensus        21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGA--i~i~~~~~~~~~~~~~~~lp~~~~~~~~   98 (302)
T 3olh_A           21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGA--AFFDIDQCSDRTSPYDHMLPGAEHFAEY   98 (302)
T ss_dssp             CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTC--EECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred             CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCC--eEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence            368999999999975     58999999         7899999999999  99988654211     112 23467788


Q ss_pred             HHhh-ccCCCcEEEEeCC---CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           72 VRSL-CKEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        72 ~~~~-~~~~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      +.++ ++++++||+||.+   +.+|.++++.|+.+||++|++|+||+.+|...|+|+++..
T Consensus        99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  159 (302)
T 3olh_A           99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK  159 (302)
T ss_dssp             HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred             HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence            8777 7899999999963   4579999999999999999999999999999999998764

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.88  E-value=1.3e-22  Score=147.11  Aligned_cols=102  Identities=20%  Similarity=0.267  Sum_probs=87.3

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEe
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC   86 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c   86 (137)
                      .....|+++++.++++++ .+|||||++.||..||||||  +|+|+..+        .++..++...  .+++++||+||
T Consensus       119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGA--iniP~~~~--------~~~~~~l~~~l~~~kdk~IVvyC  188 (265)
T 4f67_A          119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNA--INPDIENF--------REFPDYVQRNLIDKKDKKIAMFC  188 (265)
T ss_dssp             CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTC--BCCCCSSG--------GGHHHHHHHHTGGGTTSCEEEEC
T ss_pred             CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCC--EeCCHHHH--------HhhHHHHHHhhhhCCCCeEEEEe
Confidence            346799999999999864 89999999999999999999  99998633        2344444322  37889999999


Q ss_pred             CCCchHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           87 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        87 ~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      .+|.||..+++.|.+.||++|+.|+||+.+|.+..
T Consensus       189 ~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          189 TGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             SSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             CCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            99999999999999999999999999999998764

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.88  E-value=1.6e-22  Score=147.32  Aligned_cols=115  Identities=15%  Similarity=0.222  Sum_probs=95.1

Q ss_pred             eeeCHHHHHHHhhC-CCEEEecCC-hHHHhccCCCCceeeCccccccCC---CCCC-CChHHHHHHHhh-ccCCCcEEEE
Q 032621           13 ITVDVRAAKNLLES-GYGYLDVRT-AEEFKEGHVDAAKIFNIPYMFNTP---EGRV-KNPDFLKKVRSL-CKEEDRLVVG   85 (137)
Q Consensus        13 ~~is~~~~~~~~~~-~~~viDvR~-~~e~~~g~ipga~~inip~~~~~~---~~~~-~~~~~~~~~~~~-~~~~~~iv~~   85 (137)
                      ..|+++++.+++++ +.+|||||+ +.||..||||||  +|+|+..+..   ...+ ....|.+.+.++ ++++++||+|
T Consensus         6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy   83 (277)
T 3aay_A            6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGA--IKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILY   83 (277)
T ss_dssp             HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTC--EEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEE
T ss_pred             ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCc--EEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence            57999999998876 478999998 899999999999  9999864211   1112 223577777766 7889999999


Q ss_pred             eCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           86 CQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        86 c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      |.+|. +|.++++.|+.+||++|++|+||+.+|.+.++|+++...
T Consensus        84 c~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  128 (277)
T 3aay_A           84 GGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV  128 (277)
T ss_dssp             CSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             CCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence            99875 799999999999999999999999999999999987643

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.88  E-value=2.5e-22  Score=146.26  Aligned_cols=111  Identities=22%  Similarity=0.361  Sum_probs=92.3

Q ss_pred             eeCHHHHHHHhhCCCEEEecCChHHHhc----------------cCCCCceeeCcccccc-CCCCCCCC-hHHHHHHHhh
Q 032621           14 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKN-PDFLKKVRSL   75 (137)
Q Consensus        14 ~is~~~~~~~~~~~~~viDvR~~~e~~~----------------g~ipga~~inip~~~~-~~~~~~~~-~~~~~~~~~~   75 (137)
                      .++++++.+.++++. |||||++.||..                ||||||  +|+|+..+ ...+.+.. .++.+.+...
T Consensus       145 ~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~  221 (277)
T 3aay_A          145 RAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGA--INVPWSRAANEDGTFKSDEELAKLYADA  221 (277)
T ss_dssp             EECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHHHHH
T ss_pred             hcCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCCCc--eecCHHHhcCCCCcCCCHHHHHHHHHHc
Confidence            488999999887655 999999999985                999999  99998754 22333333 3455566554


Q ss_pred             -ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecC
Q 032621           76 -CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAR  127 (137)
Q Consensus        76 -~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~~~w~~-~~~p~~~~  127 (137)
                       ++++++||+||++|.||..+++.|.+ +||++|++|+||+.+|.+ .++|++++
T Consensus       222 ~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  276 (277)
T 3aay_A          222 GLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG  276 (277)
T ss_dssp             TCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred             CCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence             68899999999999999999999996 999999999999999998 89998763

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.88  E-value=2.9e-22  Score=137.29  Aligned_cols=107  Identities=14%  Similarity=0.224  Sum_probs=85.7

Q ss_pred             CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH-HHh--hc--
Q 032621            9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC--   76 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~-~~~--~~--   76 (137)
                      ...++.|+++++.+++++       +.+|||||++.||..||||||  +|||+.           ++... +..  ++  
T Consensus        20 ~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~-----------~l~~~~~~~~~~~~~   86 (175)
T 2a2k_A           20 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPC   86 (175)
T ss_dssp             STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHSSCCCC-
T ss_pred             CCCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCc--EECChh-----------HHHHHhhhhhhhccc
Confidence            345789999999999975       478999999999999999999  999995           33332 222  12  


Q ss_pred             cCCCcEEE--EeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621           77 KEEDRLVV--GCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        77 ~~~~~iv~--~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      +++++||+  ||+ +|.||..++..|++          +||++|++|+||+.+|.+.+.|+..+.
T Consensus        87 ~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~  151 (175)
T 2a2k_A           87 SLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ  151 (175)
T ss_dssp             ---CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred             cCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence            36788754  699 89999999999985          599999999999999999999886643

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.88  E-value=7e-23  Score=149.74  Aligned_cols=115  Identities=20%  Similarity=0.255  Sum_probs=95.5

Q ss_pred             eeeeCHHHHHHHhhC-CCEEEecC-ChHHHhccCCCCceeeCcccccc-C-C-CCCCC-ChHHHHHHHhh-ccCCCcEEE
Q 032621           12 VITVDVRAAKNLLES-GYGYLDVR-TAEEFKEGHVDAAKIFNIPYMFN-T-P-EGRVK-NPDFLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus        12 ~~~is~~~~~~~~~~-~~~viDvR-~~~e~~~g~ipga~~inip~~~~-~-~-~~~~~-~~~~~~~~~~~-~~~~~~iv~   84 (137)
                      ...|+++++.+++++ +.+||||| ++.+|..||||||  +|+|+... . + ...+. ...|.+.+..+ ++++++||+
T Consensus         7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv   84 (285)
T 1uar_A            7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGA--QKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL   84 (285)
T ss_dssp             GGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTC--EEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred             CceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCC--EECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence            358999999999876 48899999 7899999999999  99998631 1 1 11222 23577777776 789999999


Q ss_pred             EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ||++|. +|..+++.|+.+||++|++|+||+.+|...++|+.+..
T Consensus        85 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  129 (285)
T 1uar_A           85 YGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEV  129 (285)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCC
T ss_pred             ECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCC
Confidence            999988 79999999999999999999999999999999998754

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.88  E-value=5.5e-22  Score=140.17  Aligned_cols=105  Identities=17%  Similarity=0.270  Sum_probs=83.2

Q ss_pred             CceeeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh----ccC
Q 032621           10 AEVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL----CKE   78 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~----~~~   78 (137)
                      ..++.|+++++.++++.+       ++|||||++.||..||||||  +|||+.          ..+.+.+...    .++
T Consensus        54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGA--inIP~~----------~~l~~~l~~~~~~~~~~  121 (216)
T 3op3_A           54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGA--LNLYSQ----------EELFNFFLKKPIVPLDT  121 (216)
T ss_dssp             SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTC--EECCSH----------HHHHHHHTSSCCCCSST
T ss_pred             CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCC--EECChH----------HHHHHHHhhcccccccc
Confidence            457899999999999763       68999999999999999999  999995          1233444221    123


Q ss_pred             CCc--EEEEeC-CCchHHHHHHHHHHC----------CccceeeccccHHHHHhCCCceec
Q 032621           79 EDR--LVVGCQ-SGARSLHATADLLGA----------GFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        79 ~~~--iv~~c~-~g~ra~~~~~~l~~~----------G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      +++  ||+||. +|.||..++..|+..          ||++|++|+||+.+|.+....+-.
T Consensus       122 ~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce  182 (216)
T 3op3_A          122 QKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE  182 (216)
T ss_dssp             TSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             CCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence            444  999999 999999999999876          899999999999999887654444

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.87  E-value=2.9e-22  Score=151.82  Aligned_cols=113  Identities=18%  Similarity=0.163  Sum_probs=95.1

Q ss_pred             eeeeCHHHHHHHhhCCCEEEecCC--------hHHHhccCCCCceeeCccccc-cCCC-------CCCC-ChHHHHHHHh
Q 032621           12 VITVDVRAAKNLLESGYGYLDVRT--------AEEFKEGHVDAAKIFNIPYMF-NTPE-------GRVK-NPDFLKKVRS   74 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~~~viDvR~--------~~e~~~g~ipga~~inip~~~-~~~~-------~~~~-~~~~~~~~~~   74 (137)
                      ...|+++++.+++++ .+|||||+        +.||..||||||  +|+|+.. +...       ..+. ..+|.+.+..
T Consensus        13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~   89 (373)
T 1okg_A           13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSA--IRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA   89 (373)
T ss_dssp             CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTC--EECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCC--EEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence            579999999999887 89999998        699999999999  9999874 4221       2222 2467777766


Q ss_pred             h-ccCCCcEEEEe-CCCchHH-HHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           75 L-CKEEDRLVVGC-QSGARSL-HATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        75 ~-~~~~~~iv~~c-~~g~ra~-~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      . ++++++||+|| .+|.++. ++++.|+.+|| +|++|+||+.+|.+.++|+++..
T Consensus        90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~  145 (373)
T 1okg_A           90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE  145 (373)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred             cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence            6 78999999999 6788876 99999999999 99999999999999999998763

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.87  E-value=1.2e-22  Score=136.32  Aligned_cols=113  Identities=19%  Similarity=0.162  Sum_probs=82.0

Q ss_pred             eeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccC-C---CCCCCChHHH-HHH-Hhh-ccCCCcE
Q 032621           13 ITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-P---EGRVKNPDFL-KKV-RSL-CKEEDRL   82 (137)
Q Consensus        13 ~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~-~---~~~~~~~~~~-~~~-~~~-~~~~~~i   82 (137)
                      +.|+++++.+++++   +.+|||||++.||..||||||  +|||+..+. .   .+.+....+. ... ... ++++++|
T Consensus         4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgA--inip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~i   81 (153)
T 2vsw_A            4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEA--ININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKV   81 (153)
T ss_dssp             EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTC--EECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEE
T ss_pred             ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCC--eeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeE
Confidence            68999999999973   488999999999999999999  999986320 0   0000000110 000 011 3678899


Q ss_pred             EEEeCCCchHHHH------HHHHHH--CCccceeeccccHHHHHhCCCceecC
Q 032621           83 VVGCQSGARSLHA------TADLLG--AGFKHVSNFGGGHMAWVQNGLKVKAR  127 (137)
Q Consensus        83 v~~c~~g~ra~~~------~~~l~~--~G~~~v~~l~GG~~~w~~~~~p~~~~  127 (137)
                      |+||++|.++..+      ++.|..  .||++|++|+||+.+|.+.+.++.+.
T Consensus        82 Vvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~  134 (153)
T 2vsw_A           82 VVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG  134 (153)
T ss_dssp             EEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC
T ss_pred             EEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcC
Confidence            9999999887665      566763  49999999999999999887666554

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.87  E-value=3.3e-22  Score=134.32  Aligned_cols=107  Identities=20%  Similarity=0.260  Sum_probs=81.6

Q ss_pred             CceeeeCHHHHHHHhhC-----CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCC-cE
Q 032621           10 AEVITVDVRAAKNLLES-----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEED-RL   82 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~-----~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~i   82 (137)
                      ..+..|+++++.+++++     +.+|||||++ ||..||||||  +|||+..+.       ......+... ..+++ .|
T Consensus         2 ~~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGA--inip~~~l~-------~~~~~~l~~~l~~~~~~~v   71 (152)
T 2j6p_A            2 TNYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNS--INMPTISCT-------EEMYEKLAKTLFEEKKELA   71 (152)
T ss_dssp             -CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTC--EECCTTTCC-------HHHHHHHHHHHHHTTCCEE
T ss_pred             CCcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCc--EECChhHhh-------HHHHHHHHHHhcccCCCEE
Confidence            35689999999999976     5899999999 9999999999  999986321       1112223222 12444 47


Q ss_pred             EEEe-CCCchHHHHH----HHHHHCCc--cceeeccccHHHHHhCCCceec
Q 032621           83 VVGC-QSGARSLHAT----ADLLGAGF--KHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        83 v~~c-~~g~ra~~~~----~~l~~~G~--~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      |+|| .+|.|+..++    +.|.+.||  .+|++|+||+.+|.+.+.++..
T Consensus        72 V~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~  122 (152)
T 2j6p_A           72 VFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP  122 (152)
T ss_dssp             EEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred             EEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence            7779 7899998888    67788997  5899999999999988877654

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.87  E-value=5.1e-22  Score=141.34  Aligned_cols=99  Identities=28%  Similarity=0.370  Sum_probs=83.7

Q ss_pred             eeeCHHHHHHHhhCCCEEEecCChHHHhc----------cCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCc
Q 032621           13 ITVDVRAAKNLLESGYGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDR   81 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~----------g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   81 (137)
                      ..++++++.+    +.+|||||++.||..          ||||||  +|+|+..+....     +   .+... ++++++
T Consensus       121 ~~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~-----e---~~~~~~~~~~~~  186 (230)
T 2eg4_A          121 WLLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGS--KNAPLELFLSPE-----G---LLERLGLQPGQE  186 (230)
T ss_dssp             GBCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTC--EECCGGGGGCCT-----T---HHHHHTCCTTCE
T ss_pred             ceeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCc--EEcCHHHhCChH-----H---HHHhcCCCCCCC
Confidence            4688888876    688999999999999          999999  999997553211     1   12222 578999


Q ss_pred             EEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           82 LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      ||+||++|.||..++..|+.+| .+|++|+||+.+|.+.++|+++
T Consensus       187 iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~  230 (230)
T 2eg4_A          187 VGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP  230 (230)
T ss_dssp             EEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred             EEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence            9999999999999999999999 8999999999999999999863

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.86  E-value=4.4e-22  Score=154.65  Aligned_cols=102  Identities=29%  Similarity=0.486  Sum_probs=90.3

Q ss_pred             ceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           11 EVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      ..+.++++++.+.+++ +.+|||+|++.||..||||||  +|+|+.           ++...+.. ++++++||+||++|
T Consensus       372 ~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~vvv~C~~G  437 (474)
T 3tp9_A          372 SYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQA--HHIPLS-----------KLAAHIHD-VPRDGSVCVYCRTG  437 (474)
T ss_dssp             CCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTC--EECCHH-----------HHTTTGGG-SCSSSCEEEECSSS
T ss_pred             cccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCEEEEECCCC
Confidence            3578999999999875 489999999999999999999  999995           44444443 48899999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      .||..++..|+..||++|++|+||+.+|.+.++|+++
T Consensus       438 ~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~  474 (474)
T 3tp9_A          438 GRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA  474 (474)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred             HHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence            9999999999999999999999999999999999864

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.86  E-value=9.9e-22  Score=129.67  Aligned_cols=109  Identities=17%  Similarity=0.167  Sum_probs=77.9

Q ss_pred             eeCHHHHHH--------HhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCC-----CCCCChHHHHHHHhh--c-
Q 032621           14 TVDVRAAKN--------LLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVKNPDFLKKVRSL--C-   76 (137)
Q Consensus        14 ~is~~~~~~--------~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-----~~~~~~~~~~~~~~~--~-   76 (137)
                      .|+++++.+        .+++ +.+|||||++.||..||||||  +|+|+..+...     ...   .+...+...  . 
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   76 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKI---TVLDLISCREGKD   76 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTC--EECCCSSHHHHHHHHTTSS---CHHHHHHTTSCTT
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCc--cccCccHHHHHHHhhcCCc---chhhhCCChhhhH
Confidence            689999998        5444 489999999999999999999  99998632100     111   001111000  0 


Q ss_pred             ----cCCCcEEEEeCCCchH---------HHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           77 ----KEEDRLVVGCQSGARS---------LHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        77 ----~~~~~iv~~c~~g~ra---------~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                          .++++||+||++|.++         ..++..|...|| +|++|+||+.+|.+.+.++.++.
T Consensus        77 ~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~  140 (142)
T 2ouc_A           77 SFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS  140 (142)
T ss_dssp             HHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred             HHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence                0268899999999875         457778899999 89999999999999999887654

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=99.86  E-value=1.8e-21  Score=149.46  Aligned_cols=115  Identities=23%  Similarity=0.361  Sum_probs=94.4

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHH-----------hccCCCCceeeCcccc-------c-cCCCCCCCCh-HHHHH
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEF-----------KEGHVDAAKIFNIPYM-------F-NTPEGRVKNP-DFLKK   71 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~-----------~~g~ipga~~inip~~-------~-~~~~~~~~~~-~~~~~   71 (137)
                      ..|+++++.+.++.+ .+|||||++.||           ..||||||  +|+|+.       . +++.+.+... ++.+.
T Consensus       272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~  349 (423)
T 2wlr_A          272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGA--RWGHAGSDSTHMEDFHNPDGTMRSADDITAM  349 (423)
T ss_dssp             GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTC--EECCCCSSTTCCGGGBCTTSSBCCHHHHHHH
T ss_pred             heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCc--cccccccccccHHHHcCCCCcCCCHHHHHHH
Confidence            469999999988754 789999999999           78999999  888874       1 2333333333 45555


Q ss_pred             HHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCC
Q 032621           72 VRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREK  129 (137)
Q Consensus        72 ~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~~~  129 (137)
                      +... ++++++||+||++|.||..++..|..+||++|++|+||+.+|.+ .++|++++..
T Consensus       350 ~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~  409 (423)
T 2wlr_A          350 WKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGER  409 (423)
T ss_dssp             HHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSC
T ss_pred             HHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCC
Confidence            5433 68899999999999999999999999999999999999999998 7999998654

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=99.86  E-value=1.8e-21  Score=153.51  Aligned_cols=107  Identities=22%  Similarity=0.300  Sum_probs=95.8

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      .....|+++++.+.++.+ .+|||||++.||..||||||  +|+|..           ++...+..+ +++++||+||.+
T Consensus       374 ~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~l~~l-~~~~~ivv~C~s  439 (539)
T 1yt8_A          374 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGA--AWVLRS-----------QLKQALERL-GTAERYVLTCGS  439 (539)
T ss_dssp             CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTC--EECCGG-----------GHHHHHHHH-CCCSEEEEECSS
T ss_pred             CcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCc--hhCCHH-----------HHHHHHHhC-CCCCeEEEEeCC
Confidence            456799999999999764 88999999999999999999  999885           666666654 889999999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                      |.||..++..|+..||++|++|+||+.+|.+.|+|++++..+
T Consensus       440 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~~  481 (539)
T 1yt8_A          440 SLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESL  481 (539)
T ss_dssp             SHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred             ChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccCCCC
Confidence            999999999999999999999999999999999999986543

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=99.85  E-value=1.8e-21  Score=149.54  Aligned_cols=114  Identities=15%  Similarity=0.176  Sum_probs=96.1

Q ss_pred             eeeCHHHHHHHhhC---------CCEEEecC--ChHHHhccCCCCceeeCccccccC--CCCCC-CChHHHHHHHhh-cc
Q 032621           13 ITVDVRAAKNLLES---------GYGYLDVR--TAEEFKEGHVDAAKIFNIPYMFNT--PEGRV-KNPDFLKKVRSL-CK   77 (137)
Q Consensus        13 ~~is~~~~~~~~~~---------~~~viDvR--~~~e~~~g~ipga~~inip~~~~~--~~~~~-~~~~~~~~~~~~-~~   77 (137)
                      ..++++++.++++.         +.+|||+|  ++.+|..||||||  +|+|+..+.  +.+.+ +..++.+.+... ++
T Consensus       124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~  201 (423)
T 2wlr_A          124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGA--DYIDTNEVESEPLWNKVSDEQLKAMLAKHGIR  201 (423)
T ss_dssp             GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTC--EEEEGGGTEETTTTEECCHHHHHHHHHHTTCC
T ss_pred             cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCc--EEcCHHHhccCCCCCCCCHHHHHHHHHHcCCC
Confidence            57899999988862         47899999  9999999999999  999997652  22333 334556666555 68


Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      ++++||+||++|.||..+++.|+.+||++|++|+||+.+|...++|++++.
T Consensus       202 ~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~  252 (423)
T 2wlr_A          202 HDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGT  252 (423)
T ss_dssp             TTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCC
Confidence            899999999999999999999999999999999999999999999998754

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.85  E-value=3.2e-22  Score=136.62  Aligned_cols=115  Identities=17%  Similarity=0.237  Sum_probs=82.4

Q ss_pred             CCCceeeeCHHHHHHHhhCC--------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-c--
Q 032621            8 SGAEVITVDVRAAKNLLESG--------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-C--   76 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~~--------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~--   76 (137)
                      ....++.|+++++.++++.+        ++|||||+ .||..||||||  +|||+..+..... ..+++...+... +  
T Consensus        26 ~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGA--iniP~~~l~~~~~-~l~~l~~~~~~~~~~~  101 (169)
T 3f4a_A           26 SITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDG--WHYAYSRLKQDPE-YLRELKHRLLEKQADG  101 (169)
T ss_dssp             CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTC--EECCHHHHHHCHH-HHHHHHHHHHHHHHTS
T ss_pred             ccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCC--EECCHHHhhcccc-cHHHHHHHHHhhcccc
Confidence            34568899999999999753        78999999 89999999999  9999964311000 001111111111 1  


Q ss_pred             cCCCcEEEEeCCC-chHHHHHHHHHH----CC--ccceeeccccHHHHHhCCCceec
Q 032621           77 KEEDRLVVGCQSG-ARSLHATADLLG----AG--FKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        77 ~~~~~iv~~c~~g-~ra~~~~~~l~~----~G--~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      ..+++||+||.+| .|+..++.+|.+    .|  +.+|++|+||+.+|.+.+.|.+.
T Consensus       102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~  158 (169)
T 3f4a_A          102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES  158 (169)
T ss_dssp             SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred             cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence            1136899999987 799888877754    25  57899999999999998776544

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.84  E-value=2.5e-21  Score=129.87  Aligned_cols=110  Identities=15%  Similarity=0.103  Sum_probs=81.6

Q ss_pred             CCCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccC------C----CCCCCChHHHHHHH
Q 032621            7 SSGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT------P----EGRVKNPDFLKKVR   73 (137)
Q Consensus         7 ~~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~------~----~~~~~~~~~~~~~~   73 (137)
                      +.......|+++++.+++++   +.+|||||++.||..||||||  +|||+..+.      .    ...+......+.+.
T Consensus        10 ~~~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgA--inip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   87 (154)
T 1hzm_A           10 FASEMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESA--INVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFT   87 (154)
T ss_dssp             SSSCCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSC--CCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHH
T ss_pred             cccccccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCc--eEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHh
Confidence            33445678999999998875   589999999999999999999  999986421      0    01222222334443


Q ss_pred             hhccCCCcEEEEeCCCchH-------HHHHHHHHHC---CccceeeccccHHHHHhC
Q 032621           74 SLCKEEDRLVVGCQSGARS-------LHATADLLGA---GFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        74 ~~~~~~~~iv~~c~~g~ra-------~~~~~~l~~~---G~~~v~~l~GG~~~w~~~  120 (137)
                      . ++++++||+||.+|.++       ..+++.|+.+   ||+ |++|+||+.+|.+.
T Consensus        88 ~-~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~  142 (154)
T 1hzm_A           88 R-RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE  142 (154)
T ss_dssp             H-STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred             c-cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence            3 46788999999998765       4446666654   998 99999999999875

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.82  E-value=5.7e-20  Score=124.02  Aligned_cols=113  Identities=15%  Similarity=0.142  Sum_probs=80.1

Q ss_pred             CCCceeeeCHHHHHHHhhC---------CCEEEecCChHHHhccCCCCceeeCccccccC-----CCCCCCChHHHHHHH
Q 032621            8 SGAEVITVDVRAAKNLLES---------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-----PEGRVKNPDFLKKVR   73 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~---------~~~viDvR~~~e~~~g~ipga~~inip~~~~~-----~~~~~~~~~~~~~~~   73 (137)
                      ....+..|+++++.++++.         +.+|||||++.||..||||||  +|+|+..+.     ....+.   ....+.
T Consensus         6 ~~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga--~~i~~~~l~~~~~~~~~~~~---~~~~~~   80 (158)
T 3tg1_B            6 QLASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKIT---VLDLIS   80 (158)
T ss_dssp             -----CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTC--EECCCSSHHHHHHHTTSSCC---HHHHTC
T ss_pred             CCCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCc--eeechhHHHHHhhhhcCccc---HHhhcC
Confidence            3456789999999999973         489999999999999999999  999986421     000110   000000


Q ss_pred             h-----h--ccCCCcEEEEeCCC---------chHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           74 S-----L--CKEEDRLVVGCQSG---------ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        74 ~-----~--~~~~~~iv~~c~~g---------~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      .     .  ..++++||+||.+|         .+|..++..|...|| +|++|+||+.+|.+..-.+..
T Consensus        81 ~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~p~~~~  148 (158)
T 3tg1_B           81 CREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCD  148 (158)
T ss_dssp             CCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSCGGGBC
T ss_pred             CHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHhhhhcc
Confidence            0     0  12478999999999         459999999999999 599999999999766544333

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.82  E-value=1.1e-20  Score=149.87  Aligned_cols=97  Identities=27%  Similarity=0.431  Sum_probs=85.8

Q ss_pred             CceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           10 AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      ..++.|+++++.++++++.+|||||++.||..||||||  +|+|+.           ++.+.+.. ++++++||+||++|
T Consensus       486 ~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C~~g  551 (588)
T 3ics_A          486 GFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGS--INIPLD-----------ELRDRLEE-VPVDKDIYITCQLG  551 (588)
T ss_dssp             TSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTE--EECCHH-----------HHTTCGGG-SCSSSCEEEECSSS
T ss_pred             cccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEECCCC
Confidence            44678999999999988899999999999999999999  999995           44444444 47899999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      .||..+++.|++.||+ |++|+||+.+|.+..
T Consensus       552 ~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~  582 (588)
T 3ics_A          552 MRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL  582 (588)
T ss_dssp             HHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred             cHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence            9999999999999999 999999999998753

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.81  E-value=3.5e-19  Score=120.04  Aligned_cols=121  Identities=11%  Similarity=0.117  Sum_probs=82.0

Q ss_pred             CCCCCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCC-------CCCChHHHHHHHh
Q 032621            5 GKSSGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG-------RVKNPDFLKKVRS   74 (137)
Q Consensus         5 ~~~~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~-------~~~~~~~~~~~~~   74 (137)
                      .....+....|+++++.++++.   +.+|||||++.||..||||||  +|||+..+....       .+. ......+..
T Consensus         7 ~~~~~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~ga--inip~~~~~~~~~~~~l~~~lp-~~~~~~~~~   83 (157)
T 1whb_A            7 GKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLP-DDSKDTWKK   83 (157)
T ss_dssp             CCCCCCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTC--EEECSSSCCTTCCHHHHHHSCC-TTHHHHHHG
T ss_pred             CCcccccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCC--cccCHHHccCCCcHHHHHHHCC-hHHHHHHHh
Confidence            3445677889999999999874   478999999999999999999  999986542211       111 111111111


Q ss_pred             hccCCCcEEEEeCCCch----HHHHHHHHHH----C----Ccc-ceeeccccHHHHHhCCCceecCCCC
Q 032621           75 LCKEEDRLVVGCQSGAR----SLHATADLLG----A----GFK-HVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        75 ~~~~~~~iv~~c~~g~r----a~~~~~~l~~----~----G~~-~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                       ....+.||+||.+|.+    +..+++.|.+    .    |+. +|++|+||+.+|.+. +|.......
T Consensus        84 -~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~~  150 (157)
T 1whb_A           84 -RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNAK  150 (157)
T ss_dssp             -GGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCCC
T ss_pred             -cCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCCC
Confidence             1233458999987753    3455666652    2    444 399999999999885 777665443

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.81  E-value=1.2e-20  Score=148.78  Aligned_cols=95  Identities=22%  Similarity=0.380  Sum_probs=81.1

Q ss_pred             ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621           11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA   90 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~   90 (137)
                      .++.|+++++.++ ..+.+|||||++.||..+|||||  +|+|+.           ++.+.+.. ++++++||+||++|.
T Consensus       471 ~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga--~~ip~~-----------~l~~~~~~-~~~~~~iv~~c~~g~  535 (565)
T 3ntd_A          471 DATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGA--VNIPVD-----------ELRDRMHE-LPKDKEIIIFSQVGL  535 (565)
T ss_dssp             SCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTC--EECCGG-----------GTTTSGGG-SCTTSEEEEECSSSH
T ss_pred             ccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCc--EECCHH-----------HHHHHHhh-cCCcCeEEEEeCCch
Confidence            3467888888777 55689999999999999999999  999996           33333333 478999999999999


Q ss_pred             hHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621           91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNG  121 (137)
Q Consensus        91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~  121 (137)
                      ||..+++.|++.|| +|++|+||+.+|.+.|
T Consensus       536 rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          536 RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            99999999999999 8999999999998764

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.80  E-value=4.6e-19  Score=132.07  Aligned_cols=118  Identities=15%  Similarity=0.091  Sum_probs=92.8

Q ss_pred             CCCceeeeCHHHHHHHhhCC----CEEEecC---------ChHHH-hccCCCCceeeCcccccc-CCC----CCC-CChH
Q 032621            8 SGAEVITVDVRAAKNLLESG----YGYLDVR---------TAEEF-KEGHVDAAKIFNIPYMFN-TPE----GRV-KNPD   67 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~~----~~viDvR---------~~~e~-~~g~ipga~~inip~~~~-~~~----~~~-~~~~   67 (137)
                      +++.++.||++++.++++++    +++||++         ...|| ++||||||.+++  ++.+ ++.    ..+ +...
T Consensus        23 sm~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~D--ld~~~d~~~~~ph~LP~~~~  100 (327)
T 3utn_X           23 SMPLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFD--IDAISDKKSPYPHMFPTKKV  100 (327)
T ss_dssp             -CCSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECC--TTTSSCTTSSSTTCCCCHHH
T ss_pred             cCccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeC--hHHhcCCCCCCCCCCcCHHH
Confidence            45666799999999999753    6789986         24566 679999995444  4433 111    223 3457


Q ss_pred             HHHHHHhh-ccCCCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621           68 FLKKVRSL-CKEEDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        68 ~~~~~~~~-~~~~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      |.+.+.++ +.+++.||+|++.|. .|+++||.|+.+|+++|++|+|| .+|.++|+|++++.
T Consensus       101 f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~  162 (327)
T 3utn_X          101 FDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSK  162 (327)
T ss_dssp             HHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred             HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCC
Confidence            88888888 999999999998765 79999999999999999999977 89999999998754

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.80  E-value=6.2e-20  Score=139.05  Aligned_cols=101  Identities=19%  Similarity=0.331  Sum_probs=79.0

Q ss_pred             hCCCEEEecCChHHHh-----------ccCCCCceeeCccccccC---CCCC-CCC-hHHHHHHHhh---ccC---CCcE
Q 032621           25 ESGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNT---PEGR-VKN-PDFLKKVRSL---CKE---EDRL   82 (137)
Q Consensus        25 ~~~~~viDvR~~~e~~-----------~g~ipga~~inip~~~~~---~~~~-~~~-~~~~~~~~~~---~~~---~~~i   82 (137)
                      ..+.+|||||++.||.           .||||||  +|||+..+.   ..+. +.. .++.+.+...   +++   +++|
T Consensus       172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~i  249 (373)
T 1okg_A          172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGA--RNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSF  249 (373)
T ss_dssp             CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTC--EECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTS
T ss_pred             ccCceEEeCCCHHHccccccccccCCcCccCCCc--EEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCE
Confidence            3458899999999999           9999999  999997653   2222 222 3344444432   367   8999


Q ss_pred             EEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 032621           83 VVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR  127 (137)
Q Consensus        83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~  127 (137)
                      |+||++|.||..++..|..+||++|++|+||+.+|.+ .++|++++
T Consensus       250 vvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~  295 (373)
T 1okg_A          250 VFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  295 (373)
T ss_dssp             EEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             EEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence            9999999999999999999999999999999999987 57886543

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.78  E-value=1.9e-18  Score=128.70  Aligned_cols=109  Identities=21%  Similarity=0.383  Sum_probs=85.5

Q ss_pred             eeeCHHHHHHHhhCC-----CEEEecCChHHHh-----------ccCCCCceeeCcccccc-CCCCCCC--C-hHHHHHH
Q 032621           13 ITVDVRAAKNLLESG-----YGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPEGRVK--N-PDFLKKV   72 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-----~~viDvR~~~e~~-----------~g~ipga~~inip~~~~-~~~~~~~--~-~~~~~~~   72 (137)
                      ..++.+++++.++++     .+|||+|++.+|.           .||||||  +|+|+..+ ++.+...  . ..+...+
T Consensus       184 ~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA--~nlP~~~~ld~~~~~~~~~~e~l~~~l  261 (327)
T 3utn_X          184 EIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGT--QPLPYGSLLDPETKTYPEAGEAIHATL  261 (327)
T ss_dssp             HEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTE--EECCGGGGSCTTTCCCCCTTHHHHHHH
T ss_pred             heecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCC--cccChhhccCCCCCCCCCcHHHHHHHH
Confidence            368899999988763     6899999999995           4999999  99999776 3333322  1 1122222


Q ss_pred             ----Hhh---ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCc
Q 032621           73 ----RSL---CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK  123 (137)
Q Consensus        73 ----~~~---~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p  123 (137)
                          ...   ++++++||+||++|.+|+..+..|..+||++|.+++|+|..|.+...|
T Consensus       262 ~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p  319 (327)
T 3utn_X          262 EKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP  319 (327)
T ss_dssp             HHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred             HHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence                221   678899999999999999999999999999999999999999876444

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.78  E-value=3.7e-19  Score=138.24  Aligned_cols=104  Identities=18%  Similarity=0.239  Sum_probs=90.8

Q ss_pred             CCceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621            9 GAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      .+.++.|+++++.+.++++ +|||+|++.+|..||||||  +|+|+.          ..|.+++.++.+++++||+||..
T Consensus       269 ~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA--~~i~~~----------~~~~~~~~~l~~~~~~vvvy~~~  335 (474)
T 3tp9_A          269 APERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGS--LNIPWN----------KSFVTWAGWLLPADRPIHLLAAD  335 (474)
T ss_dssp             CCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTC--EECCSS----------TTHHHHHHHHCCSSSCEEEECCT
T ss_pred             cCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCe--EEECcc----------hHHHHHHHhcCCCCCeEEEEECC
Confidence            3457789999999999887 9999999999999999999  999985          35777777777788999999998


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      |. +.++++.|+.+||++|+.+.+|+.+|...+.++..
T Consensus       336 ~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~  372 (474)
T 3tp9_A          336 AI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVAS  372 (474)
T ss_dssp             TT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEEC
T ss_pred             Cc-HHHHHHHHHHcCCcceEEecCcHHHHHhccccccc
Confidence            76 66699999999999999866699999988887765

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.76  E-value=1.7e-18  Score=123.09  Aligned_cols=93  Identities=15%  Similarity=0.114  Sum_probs=72.4

Q ss_pred             CCEEEecCChHHHhccCCCCceeeCcccc--ccCCCC---CC-CChHHHHHHHhhccCCCcEEEEeCCCc-hHHHHHHHH
Q 032621           27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYM--FNTPEG---RV-KNPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHATADL   99 (137)
Q Consensus        27 ~~~viDvR~~~e~~~g~ipga~~inip~~--~~~~~~---~~-~~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~~~l   99 (137)
                      +.+|||+|++.||..||||||  +|+|+.  .+....   .+ ....|.+.+..+ ..+++||+||.+|. +|..+++.|
T Consensus         6 ~~~iiDvR~~~ey~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivvyc~~g~~~s~~a~~~L   82 (230)
T 2eg4_A            6 DAVLVDTRPRPAYEAGHLPGA--RHLDLSAPKLRLREEAELKALEGGLTELFQTL-GLRSPVVLYDEGLTSRLCRTAFFL   82 (230)
T ss_dssp             TCEEEECSCHHHHHHCBCTTC--EECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT-TCCSSEEEECSSSCHHHHHHHHHH
T ss_pred             CEEEEECCChhhHhhCcCCCC--EECCccchhcccCCCCCcCCCHHHHHHHHHhc-CCCCEEEEEcCCCCccHHHHHHHH
Confidence            489999999999999999999  999986  322100   00 012455555554 45889999999998 999999999


Q ss_pred             HHCCccceeeccccHHHHHhCCCceecCC
Q 032621          100 LGAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus       100 ~~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      . +||++|++|+||   |.+  +|+++..
T Consensus        83 ~-~G~~~v~~l~GG---W~~--~p~~~~~  105 (230)
T 2eg4_A           83 G-LGGLEVQLWTEG---WEP--YATEKEE  105 (230)
T ss_dssp             H-HTTCCEEEECSS---CGG--GCCBCSC
T ss_pred             H-cCCceEEEeCCC---Ccc--CcccCCC
Confidence            9 999999999999   977  7876543

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.76  E-value=3.8e-18  Score=115.02  Aligned_cols=115  Identities=10%  Similarity=0.051  Sum_probs=75.1

Q ss_pred             CCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCC------CCChHHHHHHHhhccC
Q 032621            8 SGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR------VKNPDFLKKVRSLCKE   78 (137)
Q Consensus         8 ~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~------~~~~~~~~~~~~~~~~   78 (137)
                      .......|+++++.+++++   +.+|||||++.||..||||||  +|||+..+.....      ..+ +....+.....+
T Consensus        15 ~~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gA--inip~~~l~~~~~~~~l~~~lp-~~~~~l~~~~~~   91 (157)
T 2gwf_A           15 VPRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLP-DDSKDTWKKRGN   91 (157)
T ss_dssp             ----CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTC--EECCGGGCCTTCCHHHHHHTSC-HHHHHHHHTTTT
T ss_pred             ccCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCC--cccCHHHcCCCCcHHHHHHHcC-HHHHHHHHhcCC
Confidence            3455678999999999874   479999999999999999999  9999875532210      001 111122111123


Q ss_pred             CCcEEEEeCCCch----HHHHHHHHH----HC----Ccc-ceeeccccHHHHHhCCCceec
Q 032621           79 EDRLVVGCQSGAR----SLHATADLL----GA----GFK-HVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        79 ~~~iv~~c~~g~r----a~~~~~~l~----~~----G~~-~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      .+.||+||.+|.+    +..+++.|.    +.    |+. +|++|+||+.+|.+. +|...
T Consensus        92 ~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~  151 (157)
T 2gwf_A           92 VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYT  151 (157)
T ss_dssp             SSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGB
T ss_pred             CCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhhc
Confidence            3458999987753    344455544    32    344 399999999999874 66554

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.74  E-value=1.2e-19  Score=140.83  Aligned_cols=86  Identities=27%  Similarity=0.370  Sum_probs=0.0

Q ss_pred             HHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHH
Q 032621           20 AKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATAD   98 (137)
Q Consensus        20 ~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~   98 (137)
                      +.+.+++ +.+|||||++.||..||||||  +|+|+.           ++.+.+.. ++++++||+||++|.||..++..
T Consensus       379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C~~G~rs~~a~~~  444 (466)
T 3r2u_A          379 HSEDITGNESHILDVRNDNEWNNGHLSQA--VHVPHG-----------KLLETDLP-FNKNDVIYVHCQSGIRSSIAIGI  444 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEEeCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEECCCChHHHHHHHH
Confidence            3344443 378999999999999999999  999995           34444444 47889999999999999999999


Q ss_pred             HHHCCccceeeccccHHHHHh
Q 032621           99 LLGAGFKHVSNFGGGHMAWVQ  119 (137)
Q Consensus        99 l~~~G~~~v~~l~GG~~~w~~  119 (137)
                      |+..||++|++|+||+.+|.+
T Consensus       445 L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          445 LEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ---------------------
T ss_pred             HHHcCCCCEEEecChHHHHhh
Confidence            999999999999999999965

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.50  E-value=3.1e-14  Score=110.51  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=66.0

Q ss_pred             CCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621           26 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK  105 (137)
Q Consensus        26 ~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~  105 (137)
                      .+.+|||+|++.+|..||||||  +|+|+.          ..|..++.+.++++++||+||. +.++.++++.|+.+||+
T Consensus       295 ~~~~ilD~R~~~~y~~gHIpGA--v~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~  361 (466)
T 3r2u_A          295 TNRLTFDLRSKEAYHGGHIEGT--INIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYD  361 (466)
T ss_dssp             CCSEEEECSCHHHHHHSCCTTC--EECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCC
T ss_pred             CCeEEEECCCHHHHhhCCCCCc--EECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhcc
Confidence            3479999999999999999999  999985          3677788777788999999999 55899999999999999


Q ss_pred             ceee-ccccHHHHH
Q 032621          106 HVSN-FGGGHMAWV  118 (137)
Q Consensus       106 ~v~~-l~GG~~~w~  118 (137)
                      +|+. ++|+...|.
T Consensus       362 ~v~~~l~g~~~~~~  375 (466)
T 3r2u_A          362 DIAGYQLPQSKIQT  375 (466)
T ss_dssp             CEEEEECCC-----
T ss_pred             cccccccCcccccH
Confidence            9986 677655543

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=98.25  E-value=2.3e-06  Score=56.93  Aligned_cols=85  Identities=16%  Similarity=0.203  Sum_probs=52.8

Q ss_pred             eeCHHHHHHHhhCC-CEEEecCChHH------------Hhcc-CCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccC
Q 032621           14 TVDVRAAKNLLESG-YGYLDVRTAEE------------FKEG-HVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKE   78 (137)
Q Consensus        14 ~is~~~~~~~~~~~-~~viDvR~~~e------------~~~g-~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~   78 (137)
                      .++++++..+.+.+ ..|||+|+..|            +..+ +|.|.  +++|+...    .+.. +....+... -..
T Consensus        29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~--~~iPv~~~----~~~~-~~~~~~~~~l~~~  101 (156)
T 2f46_A           29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGF--HHQPVTAR----DIQK-HDVETFRQLIGQA  101 (156)
T ss_dssp             CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEE--EECCCCTT----TCCH-HHHHHHHHHHHTS
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhh--eECccCCC----CCCH-HHHHHHHHHHHhC
Confidence            45777877776666 68999997655            2233 47655  89998532    2222 222222222 235


Q ss_pred             CCcEEEEeCCCchHHHHHHH-HHHCCcc
Q 032621           79 EDRLVVGCQSGARSLHATAD-LLGAGFK  105 (137)
Q Consensus        79 ~~~iv~~c~~g~ra~~~~~~-l~~~G~~  105 (137)
                      +.+|+++|.+|.|+..++.. +...|++
T Consensus       102 ~~pVlvHC~sG~Rs~~l~al~l~~~g~~  129 (156)
T 2f46_A          102 EYPVLAYCRTGTRCSLLWGFRRAAEGMP  129 (156)
T ss_dssp             CSSEEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence            78999999999988755443 2445654

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=97.29  E-value=0.0005  Score=44.63  Aligned_cols=90  Identities=13%  Similarity=0.096  Sum_probs=52.1

Q ss_pred             CHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc-hHH
Q 032621           16 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA-RSL   93 (137)
Q Consensus        16 s~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~   93 (137)
                      +.+++..+.+.+ ..|||+|+..+......+|-.+.++|+........-.-..+.+.+......+.+|+++|..|. |+.
T Consensus        24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg  103 (150)
T 4erc_A           24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG  103 (150)
T ss_dssp             SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHH
T ss_pred             CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
Confidence            356665555556 679999987665545556667778887533111100001233333333456789999999997 776


Q ss_pred             HH-HHHH-HHCCcc
Q 032621           94 HA-TADL-LGAGFK  105 (137)
Q Consensus        94 ~~-~~~l-~~~G~~  105 (137)
                      .+ +.+| ...|++
T Consensus       104 ~~~a~~l~~~~~~~  117 (150)
T 4erc_A          104 TMLACYLVKERGLA  117 (150)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCC
Confidence            44 3333 336663

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}

Probab=96.83  E-value=0.0021  Score=41.56  Aligned_cols=87  Identities=14%  Similarity=0.120  Sum_probs=49.1

Q ss_pred             CHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChH---HHHHHHhhccCCCcEEEEeCCCc-
Q 032621           16 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD---FLKKVRSLCKEEDRLVVGCQSGA-   90 (137)
Q Consensus        16 s~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~---~~~~~~~~~~~~~~iv~~c~~g~-   90 (137)
                      +.+++..+.+.+ ..|||+|+..++....+++..+.++|+.....   .....   +.+.+......+.+|+++|..|. 
T Consensus        25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~---p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~  101 (151)
T 2img_A           25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCP---PAPDQIDRFVQIVDEANARGEAVGVHCALGFG  101 (151)
T ss_dssp             SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCC---CCHHHHHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCC---CCHHHHHHHHHHHHHHHhCCCcEEEECCCCCC
Confidence            344444444456 67999998766544445555567777643211   11122   33333332346789999999886 


Q ss_pred             hHHHHH-HHHHHC-Ccc
Q 032621           91 RSLHAT-ADLLGA-GFK  105 (137)
Q Consensus        91 ra~~~~-~~l~~~-G~~  105 (137)
                      |+..++ ..|... |++
T Consensus       102 Rsg~~~~~~l~~~~~~~  118 (151)
T 2img_A          102 RTGTMLACYLVKERGLA  118 (151)
T ss_dssp             HHHHHHHHHHHHHHCCC
T ss_pred             hHHHHHHHHHHHHhCcC
Confidence            765553 344433 653

>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*

Probab=96.39  E-value=0.032  Score=40.66  Aligned_cols=44  Identities=18%  Similarity=0.230  Sum_probs=31.6

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHhcc----CCCCceeeCccccc
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMF   56 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~g----~ipga~~inip~~~   56 (137)
                      ..++.+++..+.+-+ ..|||.|+..|....    ..+|..++++|+..
T Consensus        54 ~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~  102 (296)
T 1ywf_A           54 SRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPD  102 (296)
T ss_dssp             TTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCC
T ss_pred             ccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCcc
Confidence            346788877666556 679999998885432    45688888888753

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=96.32  E-value=0.0066  Score=39.41  Aligned_cols=90  Identities=11%  Similarity=0.107  Sum_probs=49.0

Q ss_pred             CHHHHHHHhhCC-CEEEecCChHHHhcc----CCCCceeeCccccccC-CCCCCCChHHHHHHHhhc-cCCCcEEEEeCC
Q 032621           16 DVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMFNT-PEGRVKNPDFLKKVRSLC-KEEDRLVVGCQS   88 (137)
Q Consensus        16 s~~~~~~~~~~~-~~viDvR~~~e~~~g----~ipga~~inip~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~iv~~c~~   88 (137)
                      +..++..+.+.+ ..|||+|+..+....    .-.|-.++++|..... +...+..+.+.+.+.... ..+.+|+++|..
T Consensus        22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a  101 (151)
T 1xri_A           22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR  101 (151)
T ss_dssp             CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred             CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence            455554444446 689999976543210    0124456777774321 111222233434343332 256789999999


Q ss_pred             Cc-hHHHHHH-HHHHCCcc
Q 032621           89 GA-RSLHATA-DLLGAGFK  105 (137)
Q Consensus        89 g~-ra~~~~~-~l~~~G~~  105 (137)
                      |. |+..++. .|...|++
T Consensus       102 G~~RTg~~~a~~l~~~g~~  120 (151)
T 1xri_A          102 GKHRTGCLVGCLRKLQKWC  120 (151)
T ss_dssp             SSSHHHHHHHHHHHHTTBC
T ss_pred             CCCHHHHHHHHHHHHhCCC
Confidence            97 7666654 44556764

>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}

Probab=95.93  E-value=0.04  Score=35.68  Aligned_cols=82  Identities=16%  Similarity=0.107  Sum_probs=44.2

Q ss_pred             HhhCC-CEEEecCChHHHhc---cCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621           23 LLESG-YGYLDVRTAEEFKE---GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA   95 (137)
Q Consensus        23 ~~~~~-~~viDvR~~~e~~~---g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~   95 (137)
                      +.+.+ ..|||+|+..|...   ....|-.++++|..... ...+..  .+..+.+......+.+|+++|..|. |+..+
T Consensus        29 L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~-~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~~  107 (154)
T 2r0b_A           29 LQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNP-VENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAF  107 (154)
T ss_dssp             HHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSST-TSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred             HHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCC-cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHHH
Confidence            33445 67999998765321   11234556677764321 111211  1122223222456789999999995 87753


Q ss_pred             -HHH-HHHCCcc
Q 032621           96 -TAD-LLGAGFK  105 (137)
Q Consensus        96 -~~~-l~~~G~~  105 (137)
                       +.+ +...|++
T Consensus       108 ~~ayl~~~~~~~  119 (154)
T 2r0b_A          108 VIAYIMETFGMK  119 (154)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHHcCCC
Confidence             333 3446653

>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*

Probab=95.80  E-value=0.011  Score=38.43  Aligned_cols=88  Identities=13%  Similarity=0.065  Sum_probs=46.4

Q ss_pred             HHHHHHhh-CC-CEEEecCChHHHhcc-------CCCCceeeCccccccCCCCCC-CChHHHHHHHhhccCCCcEEEEeC
Q 032621           18 RAAKNLLE-SG-YGYLDVRTAEEFKEG-------HVDAAKIFNIPYMFNTPEGRV-KNPDFLKKVRSLCKEEDRLVVGCQ   87 (137)
Q Consensus        18 ~~~~~~~~-~~-~~viDvR~~~e~~~g-------~ipga~~inip~~~~~~~~~~-~~~~~~~~~~~~~~~~~~iv~~c~   87 (137)
                      .+..++++ .+ ..|||+|+..|....       ...|-.++++|.......... .-.++.+.+......+.+|+++|.
T Consensus        18 ~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~   97 (157)
T 3rgo_A           18 NMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCK   97 (157)
T ss_dssp             GGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             cchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence            34445543 45 579999987554221       012445677777532111100 001222333333456789999999


Q ss_pred             CCc-hHHHH-HHHH-HHCCcc
Q 032621           88 SGA-RSLHA-TADL-LGAGFK  105 (137)
Q Consensus        88 ~g~-ra~~~-~~~l-~~~G~~  105 (137)
                      .|. |+..+ +.+| ...|++
T Consensus        98 ~G~~Rsg~~~~a~l~~~~~~~  118 (157)
T 3rgo_A           98 AGRSRSATMVAAYLIQVHNWS  118 (157)
T ss_dssp             SSSSHHHHHHHHHHHHHHTCC
T ss_pred             CCCChHHHHHHHHHHHHcCCC
Confidence            998 87765 3343 445653

>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}

Probab=95.60  E-value=0.029  Score=36.73  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=42.9

Q ss_pred             HhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HH
Q 032621           23 LLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TA   97 (137)
Q Consensus        23 ~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~   97 (137)
                      +.+.+ ..|||+|+..+.   ...|-.++++|+...... .+..  .+..+.+......+.+|+++|..|. |+..+ +.
T Consensus        29 L~~~gI~~Vi~l~~~~~~---~~~~i~~~~ipi~D~~~~-~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~a  104 (160)
T 1yz4_A           29 LGRNKITHIISIHESPQP---LLQDITYLRIPVADTPEV-PIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTA  104 (160)
T ss_dssp             HHHTTCCEEEEECSSCCC---CCTTCEEEEECCCSCTTS-CGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHH
T ss_pred             HHHCCCeEEEEccCCCCC---ccCCCeEEEEECCCCCCc-cHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHH
Confidence            33445 679999975432   234556677777432111 1110  1222333332446789999999995 87643 33


Q ss_pred             H-HHHCCcc
Q 032621           98 D-LLGAGFK  105 (137)
Q Consensus        98 ~-l~~~G~~  105 (137)
                      + +...|++
T Consensus       105 ylm~~~~~~  113 (160)
T 1yz4_A          105 YVMTVTGLG  113 (160)
T ss_dssp             HHHHHHCCC
T ss_pred             HHHHHcCCC
Confidence            3 3556653

>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}

Probab=95.45  E-value=0.022  Score=36.79  Aligned_cols=80  Identities=13%  Similarity=0.102  Sum_probs=40.6

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HH-H
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TA-D   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~-~   98 (137)
                      +.+ ..|||+|+..........|-.++++|+..... ..+..  .+..+.+......+.+|+++|..|. |+..+ +. .
T Consensus        27 ~~gi~~Vi~l~~e~p~~~~~~~~~~~~~ipi~D~~~-~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl  105 (149)
T 1zzw_A           27 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYL  105 (149)
T ss_dssp             HTTEEEEEECCSSSCCTTGGGTCSEEEECCCCCSSS-CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred             HCCCcEEEEecCCCCCcccCCCCeEEEEEECCCCCc-ccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHHHHHHH
Confidence            445 57999997311100012244566777643211 11100  1122223322346789999999995 87664 33 3


Q ss_pred             HHHCCcc
Q 032621           99 LLGAGFK  105 (137)
Q Consensus        99 l~~~G~~  105 (137)
                      +...|++
T Consensus       106 ~~~~~~~  112 (149)
T 1zzw_A          106 MKHTRMT  112 (149)
T ss_dssp             HHHSCCC
T ss_pred             HHHcCCC
Confidence            4456763

>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}

Probab=95.45  E-value=0.042  Score=37.24  Aligned_cols=77  Identities=12%  Similarity=0.105  Sum_probs=42.6

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~   98 (137)
                      +.+ ..|||+|...+  ....+|-.++++|+...... .+..  ....+.+......+.+|+++|..|. |+..+  ++.
T Consensus        49 ~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~-~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayL  125 (190)
T 2wgp_A           49 ARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHA-PIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYL  125 (190)
T ss_dssp             HTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTS-CGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred             HCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCC-CHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHH
Confidence            345 67999997432  22345666677777532111 1110  1222333333346788999999995 77643  344


Q ss_pred             HHHCCc
Q 032621           99 LLGAGF  104 (137)
Q Consensus        99 l~~~G~  104 (137)
                      +...|+
T Consensus       126 m~~~~~  131 (190)
T 2wgp_A          126 MKFHNV  131 (190)
T ss_dssp             HHHHCC
T ss_pred             HHHcCC
Confidence            555665

>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}

Probab=95.34  E-value=0.047  Score=35.96  Aligned_cols=76  Identities=18%  Similarity=0.258  Sum_probs=42.2

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADL   99 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l   99 (137)
                      +.+ ..|||+|+..+-   ...|-.++++|.... +...+..  .+..+.+......+.+|+++|..|. ||..+ +.+|
T Consensus        30 ~~gI~~Vi~l~~~~~~---~~~~i~~~~ip~~D~-~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayL  105 (165)
T 1wrm_A           30 KNKVTHILSVHDSARP---MLEGVKYLCIPAADS-PSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI  105 (165)
T ss_dssp             HTTEEEEEECSTTCCC---CSTTCEEEECCCCSS-TTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred             HCCCcEEEEecCCCCC---CCCCCeEEEEECCCC-CCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHH
Confidence            345 579999976432   234556677777432 1111211  1222233232356789999999995 87764 4444


Q ss_pred             -HHCCc
Q 032621          100 -LGAGF  104 (137)
Q Consensus       100 -~~~G~  104 (137)
                       ...|+
T Consensus       106 m~~~~~  111 (165)
T 1wrm_A          106 MTVTDF  111 (165)
T ss_dssp             HHTSSC
T ss_pred             HHHcCC
Confidence             44565

>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}

Probab=95.32  E-value=0.027  Score=37.05  Aligned_cols=78  Identities=12%  Similarity=0.153  Sum_probs=42.8

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~   98 (137)
                      +.+ ..|||+|+..+.  ....|-.++++|..... ...+..  .+..+.+......+.+|+++|..|. |+..+  +..
T Consensus        35 ~~gI~~Vi~l~~~~~~--~~~~~~~~~~ip~~D~~-~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayL  111 (164)
T 2hcm_A           35 RAGITLCVNVSRQQPG--PRAPGVAELRVPVFDDP-AEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYL  111 (164)
T ss_dssp             HTTEEEEEECSSSCCC--CCCTTCEEEECCCCSCT-TSCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHHHH
T ss_pred             HCCCeEEEEcCCCCCC--CCCCCCEEEEEeCcCCC-CchHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence            345 579999985432  12345566777764321 111110  1222223222456789999999995 77644  344


Q ss_pred             HHHCCcc
Q 032621           99 LLGAGFK  105 (137)
Q Consensus        99 l~~~G~~  105 (137)
                      +...|++
T Consensus       112 m~~~~~~  118 (164)
T 2hcm_A          112 MRHRGHS  118 (164)
T ss_dssp             HHHSCCC
T ss_pred             HHHhCCC
Confidence            5556763

>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*

Probab=95.29  E-value=0.055  Score=37.11  Aligned_cols=89  Identities=13%  Similarity=0.092  Sum_probs=46.3

Q ss_pred             HHHHHHHhhCC-CEEEecCChHHHhccCC---------CCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEe
Q 032621           17 VRAAKNLLESG-YGYLDVRTAEEFKEGHV---------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGC   86 (137)
Q Consensus        17 ~~~~~~~~~~~-~~viDvR~~~e~~~g~i---------pga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c   86 (137)
                      .+++..+.+.+ ..|||+|+..|...-.+         .|-.++++|+........-....+...+...+..+.+|+++|
T Consensus        61 ~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~~p~~~~~~~~~~~i~~~~~~~~~VlVHC  140 (212)
T 1fpz_A           61 QKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHS  140 (212)
T ss_dssp             HHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            34444444446 68999999866432111         234556677642211100000123333333344678999999


Q ss_pred             CCCc-hHHHH-HHHHHHC--Ccc
Q 032621           87 QSGA-RSLHA-TADLLGA--GFK  105 (137)
Q Consensus        87 ~~g~-ra~~~-~~~l~~~--G~~  105 (137)
                      ..|. |+..+ +.+|...  |++
T Consensus       141 ~aG~gRTg~~~a~~L~~~~~g~~  163 (212)
T 1fpz_A          141 YGGLGRSCLVAACLLLYLSDTIS  163 (212)
T ss_dssp             SSSSSHHHHHHHHHHHHHCSSCC
T ss_pred             CCCCCHHHHHHHHHHHHhccCCC
Confidence            9987 65554 4445443  653

>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A

Probab=95.17  E-value=0.09  Score=33.59  Aligned_cols=79  Identities=18%  Similarity=0.142  Sum_probs=41.9

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC-ChHHHHHHHhhccCCCcEEEEeCCCc-hHHH-HHHHH-
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLH-ATADL-   99 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~-~~~~l-   99 (137)
                      +.+ ..||+++....  .....+-.+.++|+.......... -.+..+.+......+.+|+++|..|. ||.. ++.+| 
T Consensus        27 ~~gI~~Vi~l~~~~~--~~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm  104 (144)
T 3ezz_A           27 ALGITALLNVSSDCP--NHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM  104 (144)
T ss_dssp             HTTCCEEEECSSSCC--CTTTTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHH
T ss_pred             HCCCeEEEEccCCCC--ccCCCCceEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHH
Confidence            345 67999997422  111123355677775432211111 12333334333456789999999987 7653 33444 


Q ss_pred             HHCCcc
Q 032621          100 LGAGFK  105 (137)
Q Consensus       100 ~~~G~~  105 (137)
                      ...|++
T Consensus       105 ~~~~~~  110 (144)
T 3ezz_A          105 MKKRVR  110 (144)
T ss_dssp             HHHTCC
T ss_pred             HHcCCC
Confidence            446653

>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}

Probab=94.83  E-value=0.08  Score=33.92  Aligned_cols=78  Identities=18%  Similarity=0.163  Sum_probs=41.5

Q ss_pred             HhhCC-CEEEecCChHHHhccCCC-CceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--
Q 032621           23 LLESG-YGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--   95 (137)
Q Consensus        23 ~~~~~-~~viDvR~~~e~~~g~ip-ga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--   95 (137)
                      +.+.+ ..|||+|+..+   ...| +-.+.++|.... +...+..  .+..+.+......+.+|+++|..|. ||..+  
T Consensus        25 L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~-~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v~  100 (145)
T 2nt2_A           25 LQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDE-EATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVI  100 (145)
T ss_dssp             HHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSS-TTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHH
T ss_pred             HHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCC-CCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHH
Confidence            33446 57999997532   1122 335567776432 1122211  1222233332446789999999994 87543  


Q ss_pred             HHHHHHCCc
Q 032621           96 TADLLGAGF  104 (137)
Q Consensus        96 ~~~l~~~G~  104 (137)
                      ++.+...|+
T Consensus       101 ayLm~~~~~  109 (145)
T 2nt2_A          101 AYAMKEYGW  109 (145)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            344455665

>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}

Probab=94.61  E-value=0.11  Score=35.12  Aligned_cols=78  Identities=12%  Similarity=0.160  Sum_probs=42.7

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~   98 (137)
                      +.+ ..||++|...+  ....+|-.++++|...... ..+..  .+..+.+......+.+|+++|..|. ||..+  +..
T Consensus        43 ~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~-~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayL  119 (188)
T 2esb_A           43 SNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPN-SRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYL  119 (188)
T ss_dssp             HTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTT-SCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred             HCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCC-ccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence            345 57999997432  2223455667777743211 11110  1222233332456789999999995 87643  344


Q ss_pred             HHHCCcc
Q 032621           99 LLGAGFK  105 (137)
Q Consensus        99 l~~~G~~  105 (137)
                      +...|++
T Consensus       120 m~~~~~s  126 (188)
T 2esb_A          120 MKYHAMS  126 (188)
T ss_dssp             HHHSCCC
T ss_pred             HHHcCCC
Confidence            4556763

>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}

Probab=94.41  E-value=0.059  Score=34.73  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=41.1

Q ss_pred             hCC-CEEEecCChHHHhccC---CCCceeeCccccccCCCCCCCC--hHHHHHHHhhcc-CCCcEEEEeCCCc-hHH-HH
Q 032621           25 ESG-YGYLDVRTAEEFKEGH---VDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCK-EEDRLVVGCQSGA-RSL-HA   95 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~---ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~iv~~c~~g~-ra~-~~   95 (137)
                      +.+ ..|||+|+..+.....   ..|-.++++|.... +...+..  .+..+.+...+. .+.+|+++|..|. |+. .+
T Consensus        25 ~~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~-~~~~l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~~~  103 (151)
T 2e0t_A           25 RLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS-PAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLV  103 (151)
T ss_dssp             HHTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS-TTSCTHHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHHHH
T ss_pred             HcCCCEEEEccCCcccCCccccCCCCeEEEEEecccC-CCccHHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHHHH
Confidence            335 5799999764310000   12345567776432 1111110  122223323233 6789999999995 776 33


Q ss_pred             HH-HHHHCCcc
Q 032621           96 TA-DLLGAGFK  105 (137)
Q Consensus        96 ~~-~l~~~G~~  105 (137)
                      +. .+...|++
T Consensus       104 ~ayl~~~~~~~  114 (151)
T 2e0t_A          104 LAYLMLYHHLT  114 (151)
T ss_dssp             HHHHHHHSCCC
T ss_pred             HHHHHHHcCCC
Confidence            33 44556764

>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}

Probab=94.22  E-value=0.11  Score=33.25  Aligned_cols=78  Identities=12%  Similarity=0.112  Sum_probs=41.1

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADL   99 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l   99 (137)
                      +.+ ..||+++...+  .....+-.+.++|+...... .+.  -.+..+.+......+.+|+++|..|. ||..+ +.+|
T Consensus        27 ~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~-~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayL  103 (144)
T 3s4e_A           27 KNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPET-NILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFL  103 (144)
T ss_dssp             HTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTS-CGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred             HcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCC-chHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence            345 67999987322  22223445567776533211 111  01222333333456788999999987 76443 3444


Q ss_pred             -HHCCcc
Q 032621          100 -LGAGFK  105 (137)
Q Consensus       100 -~~~G~~  105 (137)
                       ...|++
T Consensus       104 m~~~~~~  110 (144)
T 3s4e_A          104 MNSEQTS  110 (144)
T ss_dssp             HHHHCCC
T ss_pred             HHHcCCC
Confidence             446653

>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*

Probab=94.11  E-value=0.077  Score=35.35  Aligned_cols=80  Identities=15%  Similarity=0.111  Sum_probs=42.1

Q ss_pred             CC-CEEEecCChHHHhc-------cCCCCceeeCccccccCCCCCCC-ChHHHHHHHhhccC-CCcEEEEeCCCc-hHHH
Q 032621           26 SG-YGYLDVRTAEEFKE-------GHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKE-EDRLVVGCQSGA-RSLH   94 (137)
Q Consensus        26 ~~-~~viDvR~~~e~~~-------g~ipga~~inip~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~iv~~c~~g~-ra~~   94 (137)
                      .+ ..||++|...++..       -.-.|-.+.++|........... -.+..+.+...... +.+|+++|..|. |+..
T Consensus        52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg~  131 (183)
T 3f81_A           52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPT  131 (183)
T ss_dssp             HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTSCGGGGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHH
T ss_pred             CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCCeEEEECCCCcchHHH
Confidence            45 67999997655221       00123355667764332111100 01233333333334 789999999997 7766


Q ss_pred             -HHHHH-HHCCcc
Q 032621           95 -ATADL-LGAGFK  105 (137)
Q Consensus        95 -~~~~l-~~~G~~  105 (137)
                       ++.+| ...|++
T Consensus       132 ~v~ayLm~~~~~~  144 (183)
T 3f81_A          132 LVIAYLMMRQKMD  144 (183)
T ss_dssp             HHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhCCC
Confidence             44444 456763

>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}

Probab=94.11  E-value=0.07  Score=35.59  Aligned_cols=79  Identities=15%  Similarity=0.128  Sum_probs=40.6

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHH---HHHHHhhccCCCcEEEEeCCCc-hHHHH-HHH
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDF---LKKVRSLCKEEDRLVVGCQSGA-RSLHA-TAD   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~   98 (137)
                      +.+ ..|||+|+..........|-.++++|+..... ..+. ..|   .+.+......+.+|+++|..|. ||..+ +.+
T Consensus        31 ~~gI~~Vi~l~~e~p~~~~~~~~i~~~~ipi~D~~~-~~l~-~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~ay  108 (177)
T 2oud_A           31 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLR-QYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAY  108 (177)
T ss_dssp             HTTEEEEEECCSSSCCTTTTTTCSEEEECCCCCCSS-CCCH-HHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred             HCCCcEEEEecCCCCcccccCCCceEEEEECCCCCc-ccHH-HHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHHHHHH
Confidence            345 57999997321100112344566777643211 1111 122   2223322346789999999995 77664 334


Q ss_pred             H-HHCCcc
Q 032621           99 L-LGAGFK  105 (137)
Q Consensus        99 l-~~~G~~  105 (137)
                      | ...|++
T Consensus       109 Lm~~~~~~  116 (177)
T 2oud_A          109 LMKHTRMT  116 (177)
T ss_dssp             HHHTSCCC
T ss_pred             HHHHcCCC
Confidence            4 446763

>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}

Probab=93.81  E-value=0.19  Score=32.56  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=45.3

Q ss_pred             eCHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhc--------cCCC
Q 032621           15 VDVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--------KEED   80 (137)
Q Consensus        15 is~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~--------~~~~   80 (137)
                      -+.++..+.+.+ + ..|||++..    ..+...   |-.+.++|+........-....|...+....        .++.
T Consensus        34 ~t~~~~~~~l~~~gi~~Iv~l~~~~~~~~~~~~~---~i~~~~~p~~d~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~  110 (167)
T 3s4o_A           34 SNLPTYIKELQHRGVRHLVRVCGPTYDATLVKSR---GIDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPP  110 (167)
T ss_dssp             GGHHHHHHHHHTTTEEEEEECSCCCSCTHHHHTT---TCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHHHHHCTTCCCC
T ss_pred             hhHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHC---CCeEEEeccCCCCCCCHHHHHHHHHHHHHHHHHHhhccccCCC
Confidence            355666666655 4 579999975    122222   2345667764221111000012333333221        3378


Q ss_pred             cEEEEeCCCc-hHHHH-HHHHHHC-Ccc
Q 032621           81 RLVVGCQSGA-RSLHA-TADLLGA-GFK  105 (137)
Q Consensus        81 ~iv~~c~~g~-ra~~~-~~~l~~~-G~~  105 (137)
                      +|+++|..|. |+..+ +..|... |++
T Consensus       111 ~vlVHC~aG~~RTg~~~a~~L~~~~~~~  138 (167)
T 3s4o_A          111 TIGVHCVAGLGRAPILVALALVEYGNVS  138 (167)
T ss_dssp             EEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred             cEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999886 65444 4455554 653

>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A

Probab=93.76  E-value=0.23  Score=33.37  Aligned_cols=88  Identities=18%  Similarity=0.250  Sum_probs=47.0

Q ss_pred             eCHHHHHHHhhC-C-CEEEecCChHH----HhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEe
Q 032621           15 VDVRAAKNLLES-G-YGYLDVRTAEE----FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC   86 (137)
Q Consensus        15 is~~~~~~~~~~-~-~~viDvR~~~e----~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c   86 (137)
                      -+.++..+.+.+ + ..||+++...+    +..-+|   .++++|+....+...-...++...+...  ..++.+|++.|
T Consensus        48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i---~~~~~pi~d~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC  124 (189)
T 3rz2_A           48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI---HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHC  124 (189)
T ss_dssp             TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC---EEEECCCCSSSCCCSHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred             ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc---EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEEC
Confidence            356667677665 4 57999997532    222233   4566675322111110011333333322  25678999999


Q ss_pred             CCCc-hHHHH-HHHHHHCCcc
Q 032621           87 QSGA-RSLHA-TADLLGAGFK  105 (137)
Q Consensus        87 ~~g~-ra~~~-~~~l~~~G~~  105 (137)
                      ..|. |+..+ +..|...|++
T Consensus       125 ~aG~gRSg~~va~~L~~~g~~  145 (189)
T 3rz2_A          125 VAGLGRAPVLVALALIEGGMK  145 (189)
T ss_dssp             SSSSTTHHHHHHHHHHTTTCC
T ss_pred             CCCCCHHHHHHHHHHHHcCCC
Confidence            9886 65544 4455555653

>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}

Probab=93.72  E-value=0.19  Score=34.73  Aligned_cols=76  Identities=13%  Similarity=0.143  Sum_probs=40.6

Q ss_pred             CC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHHH
Q 032621           26 SG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TADL   99 (137)
Q Consensus        26 ~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~l   99 (137)
                      .+ ..||+++....  ...-.|-.+.++|+...... .+..  .+..+.+......+.+|+++|..|. |+..+  ++.+
T Consensus        30 ~GIt~VInl~~e~~--~~~~~gi~y~~ipi~D~~~~-~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm  106 (211)
T 2g6z_A           30 LHITALLNVSRRTS--EACMTHLHYKWIPVEDSHTA-DISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLM  106 (211)
T ss_dssp             HTCCEEEECSSCCC--CTTCTTSEEEECCCCSSTTS-CCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCCCc--cccccCCEEEEeeCCCCCCC-CHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHH
Confidence            35 57999997422  11113445677777532211 1111  1223333333456789999999995 77643  3444


Q ss_pred             HHCCc
Q 032621          100 LGAGF  104 (137)
Q Consensus       100 ~~~G~  104 (137)
                      +..|+
T Consensus       107 ~~~g~  111 (211)
T 2g6z_A          107 KTKQF  111 (211)
T ss_dssp             HHHCC
T ss_pred             HHcCC
Confidence            54565

>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*

Probab=93.67  E-value=0.13  Score=33.31  Aligned_cols=74  Identities=18%  Similarity=0.151  Sum_probs=38.6

Q ss_pred             HHHHHHHhhCC-CEEEecCChHHHhcc-----------CCCCceeeCccccccCCCCCCCChH---HHHHHHhhccCCCc
Q 032621           17 VRAAKNLLESG-YGYLDVRTAEEFKEG-----------HVDAAKIFNIPYMFNTPEGRVKNPD---FLKKVRSLCKEEDR   81 (137)
Q Consensus        17 ~~~~~~~~~~~-~~viDvR~~~e~~~g-----------~ipga~~inip~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (137)
                      .+++..+.+.+ ..|||+|+..|....           .-.|-.++++|+....   ......   +...+....  ...
T Consensus        18 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~~---~p~~~~~~~~~~~i~~~~--~~~   92 (161)
T 2i6j_A           18 ENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGG---VPSDSQFLTIMKWLLSEK--EGN   92 (161)
T ss_dssp             HHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTTC---CCCHHHHHHHHHHHHHCC--TTE
T ss_pred             HHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCCC---CCChHHHHHHHHHHHHhC--CCC
Confidence            34455444446 679999998664321           1234456677753221   111122   333333322  223


Q ss_pred             EEEEeCCCc-hHHHHH
Q 032621           82 LVVGCQSGA-RSLHAT   96 (137)
Q Consensus        82 iv~~c~~g~-ra~~~~   96 (137)
                       +++|..|. |+..++
T Consensus        93 -lVHC~aG~~Rtg~~~  107 (161)
T 2i6j_A           93 -LVHCVGGIGRTGTIL  107 (161)
T ss_dssp             -EEECSSSSHHHHHHH
T ss_pred             -EEECCCCCCHHHHHH
Confidence             99999985 765543

>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A

Probab=92.57  E-value=0.075  Score=34.60  Aligned_cols=78  Identities=19%  Similarity=0.236  Sum_probs=38.9

Q ss_pred             HhhCC-CEEEecCChHH--Hhc-cCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621           23 LLESG-YGYLDVRTAEE--FKE-GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA   95 (137)
Q Consensus        23 ~~~~~-~~viDvR~~~e--~~~-g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~   95 (137)
                      +.+.+ ..||++|+...  |.. |.   -.+.++|+...... .+..  .+..+.+......+.+|+++|..|. ||..+
T Consensus        27 L~~~gI~~Vi~l~~~~~~~~~~~~~---i~~~~ipi~D~~~~-~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~v  102 (155)
T 2hxp_A           27 LAKLGIRYILNVTPNLPNFFEKNGD---FHYKQIPISDHWSQ-NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTV  102 (155)
T ss_dssp             HHHTTEEEEEECSSSCCCTTTTCTT---CEEEECCCCGGGGG-GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred             HHHCCCCEEEEeCCCCcccccCCCC---eEEEEEECccCCCC-CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHHH
Confidence            33445 56999997421  111 11   34566776432110 0000  1112222222446789999999994 87644


Q ss_pred             -HHHH-HHCCc
Q 032621           96 -TADL-LGAGF  104 (137)
Q Consensus        96 -~~~l-~~~G~  104 (137)
                       +.+| ...|+
T Consensus       103 v~ayLm~~~~~  113 (155)
T 2hxp_A          103 TVAYLMQKLHL  113 (155)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHcCC
Confidence             3334 44565

>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}

Probab=92.56  E-value=0.15  Score=33.51  Aligned_cols=78  Identities=10%  Similarity=0.097  Sum_probs=37.0

Q ss_pred             hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHH-
Q 032621           25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TAD-   98 (137)
Q Consensus        25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~-   98 (137)
                      +.+ ..||+++....  .....+-.+.++|....... .+.  -.+..+.+.+.+..+.+|++.|..|. ||..+ +.+ 
T Consensus        33 ~~gIt~Vlnl~~~~~--~~~~~~~~~~~ipi~D~~~~-~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayL  109 (161)
T 3emu_A           33 NNNISSILLVGIEVP--SLFKDQCDILRLDIVSEEGH-QLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFL  109 (161)
T ss_dssp             HTTEEEEEEEC---------CTTSEEEEECCCCSSTT-HHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHH
T ss_pred             HCCCCEEEEeCCCCc--cccCCCCEEEEEeCcCCCCC-cHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHH
Confidence            345 56999996422  11122345567776422110 000  01111222222346788999999997 75443 344 


Q ss_pred             HHHCCcc
Q 032621           99 LLGAGFK  105 (137)
Q Consensus        99 l~~~G~~  105 (137)
                      +...|++
T Consensus       110 m~~~~~s  116 (161)
T 3emu_A          110 MYYQRLS  116 (161)
T ss_dssp             HHHTTCC
T ss_pred             HHHhCCC
Confidence            4556763

>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}

Probab=92.30  E-value=0.37  Score=31.56  Aligned_cols=91  Identities=13%  Similarity=0.109  Sum_probs=44.5

Q ss_pred             eeCHHHHHHHhhCC-CEEEecCChHH-HhccCC--CCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCCcEEEEeC
Q 032621           14 TVDVRAAKNLLESG-YGYLDVRTAEE-FKEGHV--DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEEDRLVVGCQ   87 (137)
Q Consensus        14 ~is~~~~~~~~~~~-~~viDvR~~~e-~~~g~i--pga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c~   87 (137)
                      .-+++++++. +.+ ..|||++.... |....+  .|-.+.++|+........-....|...+...+  ..+.+|+++|.
T Consensus        43 ~~~~~~ll~~-~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~vlVHC~  121 (169)
T 1yn9_A           43 VWTAEQIVKQ-NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCT  121 (169)
T ss_dssp             CCCHHHHHHH-CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECS
T ss_pred             CCCHHHHHhh-CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence            3456666664 345 67999986431 221111  13344566653221100000012333332221  36778999999


Q ss_pred             CCc-hHHHH-HHHHHH-CCcc
Q 032621           88 SGA-RSLHA-TADLLG-AGFK  105 (137)
Q Consensus        88 ~g~-ra~~~-~~~l~~-~G~~  105 (137)
                      .|. |+..+ +.+|.. .|++
T Consensus       122 aG~~RTg~~va~~L~~~~~~~  142 (169)
T 1yn9_A          122 HGINRTGYMVCRYLMHTLGIA  142 (169)
T ss_dssp             SSSHHHHHHHHHHHHHHHCCC
T ss_pred             CCCChHHHHHHHHHHHHhCCC
Confidence            886 65443 444544 6663

>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A

Probab=91.70  E-value=1  Score=30.62  Aligned_cols=76  Identities=21%  Similarity=0.262  Sum_probs=39.7

Q ss_pred             hCC-CEEEecCChHH-------HhccCCCCceeeCccccccCCCCCCCChHHHH---HHHhhcc-CCCcEEEEeCCCc-h
Q 032621           25 ESG-YGYLDVRTAEE-------FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK---KVRSLCK-EEDRLVVGCQSGA-R   91 (137)
Q Consensus        25 ~~~-~~viDvR~~~e-------~~~g~ipga~~inip~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~iv~~c~~g~-r   91 (137)
                      +.+ ..|||++...+       +..+  .+-.+.++|.... +..++. ..|..   .+...+. .+.+|+++|..|. |
T Consensus        69 ~~gIt~Vinl~~~~~~~~~~~~~~~~--~~i~y~~ipi~D~-p~~dl~-~~f~~~~~fI~~~l~~~~~~VLVHC~aG~sR  144 (205)
T 2pq5_A           69 QLGITHVVNAAAGKFQVDTGAKFYRG--MSLEYYGIEADDN-PFFDLS-VYFLPVARYIRAALSVPQGRVLVHCAMGVSR  144 (205)
T ss_dssp             HHTCCEEEETBCSTTSCCCHHHHTTT--SSCEEEECBCCCC-TTSCGG-GGHHHHHHHHHHHHTSTTCCEEEECSSSSSH
T ss_pred             HcCCeEEEEeCCCcccCCcchhhhcc--CCceEEeeecCCC-CcchHH-HHHHHHHHHHHHHHhcCCCeEEEECCCCCcH
Confidence            345 67999997431       1111  1235567776432 222221 12222   2322233 5778999999995 7


Q ss_pred             HHHH-HH-HHHHCCc
Q 032621           92 SLHA-TA-DLLGAGF  104 (137)
Q Consensus        92 a~~~-~~-~l~~~G~  104 (137)
                      |..+ +. .+...|+
T Consensus       145 S~tvv~aYLm~~~~~  159 (205)
T 2pq5_A          145 SATLVLAFLMIYENM  159 (205)
T ss_dssp             HHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHcCC
Confidence            7644 33 4455665

>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A

Probab=91.40  E-value=0.64  Score=29.69  Aligned_cols=89  Identities=18%  Similarity=0.263  Sum_probs=45.1

Q ss_pred             eeCHHHHHHHhhC-C-CEEEecCChH----HHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCCcEEEE
Q 032621           14 TVDVRAAKNLLES-G-YGYLDVRTAE----EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEEDRLVVG   85 (137)
Q Consensus        14 ~is~~~~~~~~~~-~-~~viDvR~~~----e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~   85 (137)
                      ..+.+++.+.+.+ + ..||+++...    .+..   .+-.+.++|.....+...-...++...+...+  .++.+|+++
T Consensus        26 ~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~---~~~~~~~~p~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVH  102 (159)
T 1rxd_A           26 NATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK---EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVH  102 (159)
T ss_dssp             GGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHH---TTCEEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred             cccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHH---cCCEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            4567776666654 4 5688988642    1222   23345666643221111000012333333321  356899999


Q ss_pred             eCCCc-hHHHH-HHHHHHCCcc
Q 032621           86 CQSGA-RSLHA-TADLLGAGFK  105 (137)
Q Consensus        86 c~~g~-ra~~~-~~~l~~~G~~  105 (137)
                      |..|. |+..+ +..|...|++
T Consensus       103 C~aG~~Rtg~~~a~~l~~~~~~  124 (159)
T 1rxd_A          103 CVAGLGRAPVLVALALIEGGMK  124 (159)
T ss_dssp             CSSSSTTHHHHHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHHHHHHhCCC
Confidence            99886 66554 4455555653

>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}

Probab=91.10  E-value=1.2  Score=30.75  Aligned_cols=77  Identities=12%  Similarity=0.116  Sum_probs=39.7

Q ss_pred             hCC-CEEEecCChH-------HHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhc-cCCCcEEEEeCCCc-hH
Q 032621           25 ESG-YGYLDVRTAE-------EFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLC-KEEDRLVVGCQSGA-RS   92 (137)
Q Consensus        25 ~~~-~~viDvR~~~-------e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~iv~~c~~g~-ra   92 (137)
                      +.+ ..||+++...       +|..  -.|-.++++|.... +...+..  ....+.+...+ ..+.+|+++|..|. ||
T Consensus        77 ~~gIt~VInl~~~~~~~~~~~~~~~--~~~i~y~~ipi~D~-~~~~l~~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS  153 (219)
T 2y96_A           77 KAGFTHVLNAAHGRWNVDTGPDYYR--DMDIQYHGVEADDL-PTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRS  153 (219)
T ss_dssp             HTTCCEEEETTBSTTSBCCHHHHTT--TSCCEEEECCCCSS-TTSCGGGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred             HCCCeEEEECCCCccccccchhhhc--ccCcEEEEEECCCC-CchhHHHHHHHHHHHHHHHHHccCCeEEEECCCCCCHH
Confidence            345 5799999642       1110  11334566776432 1111110  12223333333 46788999999995 76


Q ss_pred             HHH-HH-HHHHCCc
Q 032621           93 LHA-TA-DLLGAGF  104 (137)
Q Consensus        93 ~~~-~~-~l~~~G~  104 (137)
                      ..+ +. .+...|+
T Consensus       154 ~tvv~aYLm~~~~~  167 (219)
T 2y96_A          154 ATLVLAYLMIHKDM  167 (219)
T ss_dssp             HHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHcCC
Confidence            653 33 4455665

>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}

Probab=89.88  E-value=0.99  Score=30.42  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=40.2

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHHHH-HH-HHC
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHATA-DL-LGA  102 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~~-~l-~~~  102 (137)
                      ..|||+|+..+.  -...+-.++++|..... ...+..  ..+.+.+......+.+|++.|..|. |+..++. .| ...
T Consensus        75 ~~Vi~l~~~~~~--~~~~~~~~~~~p~~d~~-~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~  151 (195)
T 2q05_A           75 KYVLNLTMDKYT--LPNSNINIIHIPLVDDT-TTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKN  151 (195)
T ss_dssp             SEEEECSSSCCC--CTTCCCEEEECCCCCSS-SCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCC--cccCCcEEEEEEcCCCC-cccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHh
Confidence            369999985432  12234456677764321 111110  2333334333446789999999985 7655533 33 345


Q ss_pred             Ccc
Q 032621          103 GFK  105 (137)
Q Consensus       103 G~~  105 (137)
                      |++
T Consensus       152 ~~~  154 (195)
T 2q05_A          152 KES  154 (195)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            654

>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1

Probab=89.83  E-value=0.038  Score=37.06  Aligned_cols=23  Identities=22%  Similarity=0.307  Sum_probs=20.2

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccc
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMF   56 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~   56 (137)
                      .++||||.+.||.    |||  +|||-..
T Consensus       122 ~~liDvRe~~E~~----pgA--~~iprg~  144 (168)
T 1v8c_A          122 GAVVRFREVEPLK----VGS--LSIPQLR  144 (168)
T ss_dssp             TEEEEEEEEEEEE----ETT--EEEEEEE
T ss_pred             eEEEECCChhhcC----CCC--EEcChhH
Confidence            3899999999999    999  9999753

>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A

Probab=87.91  E-value=3.6  Score=30.51  Aligned_cols=82  Identities=7%  Similarity=0.134  Sum_probs=43.7

Q ss_pred             CHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCC
Q 032621           16 DVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQS   88 (137)
Q Consensus        16 s~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~   88 (137)
                      ++++..+.+++ + ..|||+|..    ..+..   .|-.++++|+...    .....+....+-+. ...+.+|+++|..
T Consensus       206 ~~~~~~~~L~~~GI~~VInL~~~~y~~~~~~~---~gi~~~~ipi~D~----~~P~~~~~~~fi~~~~~~~~~VLVHC~a  278 (348)
T 1ohe_A          206 SPETYIQYFKNHNVTTIIRLNKRMYDAKRFTD---AGFDHHDLFFADG----STPTDAIVKEFLDICENAEGAIAVHSKA  278 (348)
T ss_dssp             CTHHHHHHHHHTTEEEEEECSCCSSCTHHHHT---TTCEEEECCCCTT----CCCCHHHHHHHHHHHHSCSSEEEEECSS
T ss_pred             CHHHHHHHHHHcCCCEEEECCCCcCChhhhhc---CCcEEEEecCCCC----CCCCHHHHHHHHHHHHhCCCcEEEECCC
Confidence            35555555554 5 579999964    22322   2334566776421    11122222222222 3567899999999


Q ss_pred             Cc-hHHHH-HHHHHH-CCc
Q 032621           89 GA-RSLHA-TADLLG-AGF  104 (137)
Q Consensus        89 g~-ra~~~-~~~l~~-~G~  104 (137)
                      |. |+..+ +..|.. .|+
T Consensus       279 G~gRTGtvvaayLm~~~g~  297 (348)
T 1ohe_A          279 GLGRTGTLIACYIMKHYRM  297 (348)
T ss_dssp             SSHHHHHHHHHHHHHHHCC
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence            85 65444 334444 565

>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}

Probab=87.84  E-value=1.6  Score=31.51  Aligned_cols=89  Identities=9%  Similarity=0.045  Sum_probs=45.1

Q ss_pred             CHHHHHHHhhCC-CEEEecCChHHHhcc------------CCCCceeeCccccccCCCCCC-CChHHHHHHHhhc-cCCC
Q 032621           16 DVRAAKNLLESG-YGYLDVRTAEEFKEG------------HVDAAKIFNIPYMFNTPEGRV-KNPDFLKKVRSLC-KEED   80 (137)
Q Consensus        16 s~~~~~~~~~~~-~~viDvR~~~e~~~g------------~ipga~~inip~~~~~~~~~~-~~~~~~~~~~~~~-~~~~   80 (137)
                      +..++..+-+.+ ..||+++...+...-            ...|-.++++|+......... .-.+....+...+ ..+.
T Consensus        28 ~~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~~~~~~~I~~~l~~~g~  107 (294)
T 3nme_A           28 TPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGG  107 (294)
T ss_dssp             STHHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             CHHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence            345555554556 579999987663321            112446677777422100000 0011122232223 2467


Q ss_pred             cEEEEeCCCc-hHHH-HHHHHHH-CCc
Q 032621           81 RLVVGCQSGA-RSLH-ATADLLG-AGF  104 (137)
Q Consensus        81 ~iv~~c~~g~-ra~~-~~~~l~~-~G~  104 (137)
                      +|+++|..|. ||.. ++.+|.. .|+
T Consensus       108 ~VLVHC~aG~sRS~tvv~ayLm~~~g~  134 (294)
T 3nme_A          108 VTYVHSTAGMGRAPAVALTYMFWVQGY  134 (294)
T ss_dssp             EEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred             EEEEECCCCCchhHHHHHHHHHHHhCC
Confidence            8999999997 7544 3444443 455

>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A

Probab=87.62  E-value=0.76  Score=30.31  Aligned_cols=75  Identities=13%  Similarity=0.076  Sum_probs=39.0

Q ss_pred             CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHHH--HHHHHC
Q 032621           28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHAT--ADLLGA  102 (137)
Q Consensus        28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~--~~l~~~  102 (137)
                      ..||+++...+..  ...+-.+.++|....... .+..  ....+.+......+.+|+++|..|. ||..++  ..+...
T Consensus        58 ~~Ii~l~~~~~~~--~~~~~~~~~~p~~d~~~~-~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~~  134 (176)
T 3cm3_A           58 KYVLNLTMDKYTL--PNSNINIIHIPLVDDTTT-DISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKN  134 (176)
T ss_dssp             SEEEECSSSCCCC--TTSCCEEEECCCCCSSSC-CCGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred             CEEEEecCCCCCc--CCCCCEEEEEECCCCCcc-cHHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHHh
Confidence            3699999753321  112335566776432211 1111  2233333333345788999999985 765543  334445


Q ss_pred             Ccc
Q 032621          103 GFK  105 (137)
Q Consensus       103 G~~  105 (137)
                      |++
T Consensus       135 ~~~  137 (176)
T 3cm3_A          135 KES  137 (176)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            654

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=87.49  E-value=1.9  Score=27.87  Aligned_cols=89  Identities=13%  Similarity=0.095  Sum_probs=46.2

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCChHHHhc-------cCCCCceeeCccccccCCCCCCCChHHHHHHHhhcc-CCCcEE
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKE-------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCK-EEDRLV   83 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~-------g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iv   83 (137)
                      ..++...+..+.+.| .++|+.|+..+-..       -.-.|...+.+|.+..++    +..+..+.+..... .+++|+
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~----~~~~v~~~~~~i~~~~G~dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNP----KVEDVEAFFAAMDQHKGKDVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSC----CHHHHHHHHHHHHHTTTSCEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCC----CHHHHHHHHHHHHhcCCCCEE
Confidence            356677777777777 57888886543210       001244446666642111    11222222222211 234899


Q ss_pred             EEeCCCchHHHH-HHHHHHCCcc
Q 032621           84 VGCQSGARSLHA-TADLLGAGFK  105 (137)
Q Consensus        84 ~~c~~g~ra~~~-~~~l~~~G~~  105 (137)
                      +.|.+|.+...+ +..+...|.+
T Consensus       102 VnnAgg~r~~~l~~~~~~~~G~~  124 (157)
T 3gxh_A          102 VHCLANYRASAFAYLYQLKQGQN  124 (157)
T ss_dssp             EECSBSHHHHHHHHHHHHHTTCC
T ss_pred             EECCCCCCHHHHHHHHHHHcCCC
Confidence            999988765443 3444456654

>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A

Probab=87.42  E-value=1.1  Score=31.55  Aligned_cols=86  Identities=15%  Similarity=0.226  Sum_probs=45.5

Q ss_pred             eeCHHHHHHHhhC---C-CEEEecCCh------HHHhccCCCCceeeCccccccCCCCCCCCh----HHHHHHHhhcc--
Q 032621           14 TVDVRAAKNLLES---G-YGYLDVRTA------EEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLCK--   77 (137)
Q Consensus        14 ~is~~~~~~~~~~---~-~~viDvR~~------~e~~~g~ipga~~inip~~~~~~~~~~~~~----~~~~~~~~~~~--   77 (137)
                      +.++.++.+.++.   + ..|||++..      ..|...+|   .++++|+...   +.....    .|...+...+.  
T Consensus        66 r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi---~y~~~p~~D~---~~~P~~~~l~~~~~~i~~~~~~~  139 (241)
T 2c46_A           66 RFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGI---KYIKLQCKGH---GECPTTENTETFIRLCERFNERN  139 (241)
T ss_dssp             CCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTC---EEEECCCCCT---TCCCCHHHHHHHHHHHTTC----
T ss_pred             cCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCC---EEEEEecCCC---CCCCChHHHHHHHHHHHHHHHhC
Confidence            4567888776653   3 679999864      33333333   4566776321   111112    23333333222  


Q ss_pred             CCCcEEEEeCCCc-hHHHH-HHHHHH-CCcc
Q 032621           78 EEDRLVVGCQSGA-RSLHA-TADLLG-AGFK  105 (137)
Q Consensus        78 ~~~~iv~~c~~g~-ra~~~-~~~l~~-~G~~  105 (137)
                      ++.+|++.|..|. |+..+ +.+|.. .|++
T Consensus       140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s  170 (241)
T 2c46_A          140 PPELIGVHCTHGFNRTGFLICAFLVEKMDWS  170 (241)
T ss_dssp             -CEEEEEECSSSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence            3478999999886 65443 344444 5653

>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}

Probab=85.06  E-value=2.2  Score=28.25  Aligned_cols=38  Identities=11%  Similarity=0.117  Sum_probs=29.5

Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      .++.+++++|++-..+...+..|...|+. +..+.|++.
T Consensus        44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~   81 (185)
T 2jgn_A           44 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS   81 (185)
T ss_dssp             -CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC----
T ss_pred             CCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCC
Confidence            45678999999988999999999999986 888998764

>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}

Probab=81.74  E-value=1.7  Score=28.03  Aligned_cols=36  Identities=19%  Similarity=0.391  Sum_probs=31.4

Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      ...+++++|++-..+...+..|...|+. +..+.|++
T Consensus        34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~   69 (163)
T 2hjv_A           34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGM   69 (163)
T ss_dssp             CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred             CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence            4567999999988999999999999986 88888875

>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1

Probab=81.16  E-value=4.3  Score=28.55  Aligned_cols=45  Identities=16%  Similarity=0.050  Sum_probs=32.0

Q ss_pred             CcEEEEeCCCc---hHHHHHHHHHHCCccceeec-ccc----------HHHHHhCCCcee
Q 032621           80 DRLVVGCQSGA---RSLHATADLLGAGFKHVSNF-GGG----------HMAWVQNGLKVK  125 (137)
Q Consensus        80 ~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l-~GG----------~~~w~~~~~p~~  125 (137)
                      .+|+++|..|.   .+..+|++|...||+ |.++ .+.          +..|...+.++.
T Consensus        59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~  117 (246)
T 1jzt_A           59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL  117 (246)
T ss_dssp             CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence            58999999876   578889999999996 6543 322          345666666554

>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}

Probab=80.76  E-value=1.5  Score=28.44  Aligned_cols=35  Identities=17%  Similarity=0.147  Sum_probs=25.8

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      ..|+|+|.+.. ||..|...|+.+.-+++.+...|.
T Consensus        21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt   56 (148)
T 3rh0_A           21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT   56 (148)
T ss_dssp             CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred             CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence            46999999876 999999999886544555554443

>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B

Probab=80.56  E-value=1.6  Score=27.86  Aligned_cols=36  Identities=14%  Similarity=-0.007  Sum_probs=26.4

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      +.|+|+|.+.. ||..|...|+.+.-.++.+...|..
T Consensus         4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~   40 (139)
T 1jl3_A            4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIE   40 (139)
T ss_dssp             EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCC
Confidence            36999999876 9999999988864344656655543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	137
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	1e-22
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	2e-10
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	3e-10
d1qxna_	137	c.46.1.3 (A:) Polysulfide-sulfur transferase (sulf	9e-09
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	3e-07
d1yt8a1	136	c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase	9e-07
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	1e-06
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	2e-06
d1yt8a3	157	c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase	2e-06
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	9e-06
d1c25a_	161	c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId:	1e-05
d1yt8a4	130	c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase	5e-05
d1yt8a2	101	c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P	8e-05
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	1e-04
d1t3ka_	132	c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {	2e-04
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	4e-04
d2gwfa1	135	c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal h	0.001
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	0.001
d1s0aa_	429	c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxonona	0.003

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.1 bits (207), Expect = 1e-22
 Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 2/113 (1%)

Query: 14  TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 73
           +V V  A +LL +G+ YLDVRT EEF +GH   A   N+PYM     G  KN DFL++V 
Sbjct: 9   SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAI--NVPYMNRGASGMSKNTDFLEQVS 66

Query: 74  SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126
           S   + D ++VGCQSG RS+ AT DLL AGF  V +  GG+ AW +NGL  KA
Sbjct: 67  SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 119

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 52.0 bits (124), Expect = 2e-10
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 15/108 (13%)

Query: 14  TVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV 72
            ++V  A   L+     L D+R  + F  GH   A       +         +       
Sbjct: 6   CINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPV---- 61

Query: 73  RSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
                     +V C  G  S  A   LL  G+  V +  GG  AW + 
Sbjct: 62  ----------MVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ 99

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 52.2 bits (124), Expect = 3e-10
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 20  AKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCK-- 77
              L  +     D R+ +E++   V AAK  +IP   N       +P    ++R+     
Sbjct: 20  LGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGR 79

Query: 78  -------EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKV 124
                   +  +V  CQ+  RS          G+  V  + G    W  +    V
Sbjct: 80  LEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPV 134

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]} Length = 137

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

 Score = 48.3 bits (114), Expect = 9e-09
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 12/131 (9%)

Query: 6   KSSGAEVITVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV 63
           K++ A+++ +  + A  LL+       +DVR  +E K       K +             
Sbjct: 16  KAAKADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLA 75

Query: 64  KNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK 123
           K+    +K   +          C++ AR+  A   L   GFK + N  GG   W++ GL 
Sbjct: 76  KSGLDPEKPVVVF---------CKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLP 126

Query: 124 -VKAREKPADH 133
            +        H
Sbjct: 127 SLDRSHHHHHH 137

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 3e-07
 Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 14/118 (11%)

Query: 12  VITV-DVRAAKNLLESGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNTP 59
           V+ V DV  A +  E+    +D R A  F             GH+  A       +    
Sbjct: 5   VVKVTDVLLASH--ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREG 62

Query: 60  EGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117
           E +  +             +  ++V C SG  +      L      +V  + G    W
Sbjct: 63  ELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW 120

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.3 bits (101), Expect = 9e-07
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 15/118 (12%)

Query: 10  AEVITVDVRAAKNLLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD 67
               ++     + LL++      LD R  +E++   +          +         +P 
Sbjct: 21  RHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISVPGAELVLRVAELAPDPR 80

Query: 68  FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK-HVSNFGGGHMAWVQNGLKV 124
                        R++V C    RS+  T  LL AG    V+    G + W   G ++
Sbjct: 81  T------------RVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQL 126

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 43.2 bits (100), Expect = 1e-06
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 8/126 (6%)

Query: 12  VITVDVRAAKNLLESGYGYLDVRTAEEFKEGH------VDAAKIFNIPYMFNTPEGRVKN 65
           VI         L       +D+ +A  + EGH      VD  +           +   + 
Sbjct: 10  VIEPA-DLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQ 68

Query: 66  PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125
            + L        E   +V   + G  +      L   G +      GG  AW+     + 
Sbjct: 69  LESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPL- 127

Query: 126 AREKPA 131
           +RE PA
Sbjct: 128 SRELPA 133

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-06
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 19/126 (15%)

Query: 13  ITVDVRAAKNLLESGYGY---LDVRTAEEFKEGHVDAAKIFNIPYM--FNTPEGRVKNPD 67
           I+  V      LE G      +D R  E ++  H+++A    IP +      +G +    
Sbjct: 16  ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRA 75

Query: 68  FLKKVRSLCKEEDR-----LVVGCQSGARS---------LHATADLLGAGFKHVSNFGGG 113
              +     +   R     +V+  +S +           L      L           GG
Sbjct: 76  LFTRGEDRDRFTRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGG 135

Query: 114 HMAWVQ 119
              +  
Sbjct: 136 FSKFQA 141

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 157

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.6 bits (99), Expect = 2e-06
 Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 16/128 (12%)

Query: 11  EVITVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFL 69
              T+D     + L      + D   +  + + H+  A       +    E         
Sbjct: 3   RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALER-------- 54

Query: 70  KKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV-KARE 128
                     +R V+ C S   +  A A++     K V    GG  AWV  GL       
Sbjct: 55  ------LGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGES 108

Query: 129 KPADHRSD 136
             A  R D
Sbjct: 109 LLASPRID 116

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 40.6 bits (94), Expect = 9e-06
 Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 20/110 (18%)

Query: 31  LDVRTAEEF-----------KEGHVDAAK---------IFNIPYMFNTPEGRVKNPDFLK 70
            D R+A+ F             GH++ A+               +  + E    N   + 
Sbjct: 16  TDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVV 75

Query: 71  KVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120
           +      +    V  C SG  +    A +   G  H   + G    +   
Sbjct: 76  QGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGL 125

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 18/134 (13%), Positives = 37/134 (27%), Gaps = 25/134 (18%)

Query: 4   TGKSSGAEVITVDVRAAKNLLESGYGY-------LDVRTAEEFKEGHVDAAKIFNIPYMF 56
            GK    + I+ ++    ++L   +         +D R   E++ GH+  A   N+    
Sbjct: 16  AGKHQDLKYISPEI--MASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--NLH--- 68

Query: 57  NTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA----------GFKH 106
              E           V +  K    +     S  R       +              +  
Sbjct: 69  -MEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPE 127

Query: 107 VSNFGGGHMAWVQN 120
           +    GG+  +   
Sbjct: 128 LYVLKGGYKEFFMK 141

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 130

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.0 bits (87), Expect = 5e-05
 Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 16/115 (13%)

Query: 10  AEVITVDVRAAKNLLESGYG---YLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP 66
           A V  +D+       +        LDVRT EE++ GH+  ++      +    +      
Sbjct: 20  AGVERLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVR 79

Query: 67  DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
                         RLV+    G R+  + + L   G++ V+   G   A     
Sbjct: 80  GA------------RLVLVDDDGVRANMSASWLAQMGWQ-VAVLDGLSEADFSER 121

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.3 bits (85), Expect = 8e-05
 Identities = 23/110 (20%), Positives = 30/110 (27%), Gaps = 12/110 (10%)

Query: 12  VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 71
           V T     A  L       LDVR  + F + H   A    +  +      RV   D    
Sbjct: 3   VRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRD--TP 60

Query: 72  VRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121
           +      E    V  Q               G+  V+   GG   W   G
Sbjct: 61  ITVYDDGEGLAPVAAQRLHDL----------GYSDVALLDGGLSGWRNAG 100

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 21  KNLLESGYGYLDVRTAEEFK----EGHVDAAKIFNIPY-------MFNTPEGRVKNPDFL 69
           +NL    +  +D R    +     E         +I          F T +G  K+P+ L
Sbjct: 20  ENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEEL 79

Query: 70  KKVRSLCK--EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL 122
           + +    K      L+  C+ G  + H        G   V+ + G    W     
Sbjct: 80  RAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAP 134

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 132

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.0 bits (84), Expect = 2e-04
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 3/124 (2%)

Query: 11  EVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFL 69
            +  +       L        +DVR  E   +GH+  +  +      +     V+N    
Sbjct: 6   SISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDK 65

Query: 70  KKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV-KARE 128
             +               +     +        G K++     G   W  +G  V +  E
Sbjct: 66  DTLVFHSALSQV-RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 124

Query: 129 KPAD 132
            P  
Sbjct: 125 VPCK 128

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 36.0 bits (82), Expect = 4e-04
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 12/120 (10%)

Query: 11  EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIP-YMFNTPEGRVKNPDFL 69
           E+  +D R A    E           +E+  GH+  A  F+I     +T       P   
Sbjct: 18  EIQIIDARMASPGQEDRNVA------QEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPE 71

Query: 70  KKVRSLCKE----EDRLVVGCQS-GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124
               ++ +     +  L+V  +     +  A   L   G + VS  GGG   W ++ L +
Sbjct: 72  TFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLL 131

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 0.001
 Identities = 12/128 (9%), Positives = 36/128 (28%), Gaps = 23/128 (17%)

Query: 14  TVDVRAAKNLLESGYGY---LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN----- 65
            +  +    ++         +D R  +++++  +  +   ++P    +P           
Sbjct: 2   AITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--SVPEEAISPGVTASWIEAHL 59

Query: 66  PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG-------------G 112
           PD  K         + +V+     +         L +    +  +              G
Sbjct: 60  PDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEG 119

Query: 113 GHMAWVQN 120
           G+  W+  
Sbjct: 120 GYENWLLC 127

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 34.5 bits (78), Expect = 0.001
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 19/124 (15%)

Query: 16  DVRAAKNLLESGYGYL-DVRTAEEFK--------EGHVDAAKIFNIPYMFNTPEGRVKNP 66
           DV      ++ G G L DVR+ +E++             A +  +IP   N P  +  NP
Sbjct: 8   DVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNP 67

Query: 67  DFLKKVRSLCKE---------EDRLVVGCQSGARSLHATADL-LGAGFKHVSNFGGGHMA 116
           D   K     +          +  +VV C+   RS H+   L    G+ HV N+ G    
Sbjct: 68  DGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTE 127

Query: 117 WVQN 120
           W   
Sbjct: 128 WGNL 131

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]} Length = 429

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

 Score = 34.2 bits (77), Expect = 0.003
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 3/101 (2%)

Query: 39  FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV--GCQSG-ARSLHA 95
                 + A +   P +      R+ +P++LK++R +C  E  L++     +G  R+   
Sbjct: 198 MAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL 257

Query: 96  TADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADHRSD 136
            A         +   G                 + A+  S+
Sbjct: 258 FACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISN 298

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	137
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.96
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.95
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.95
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.94
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.94
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.94
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.94
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.93
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	99.93
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.93
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.92
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.92
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.92
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.92
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.9
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.89
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.89
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.88
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.8
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.75
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.71
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	97.13
d1ywfa1	272	Phosphotyrosine protein phosphatase PtpB {Mycobact	95.22
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	94.55
d1fpza_	176	Kinase associated phosphatase (kap) {Human (Homo s	94.22
d1jl3a_	137	Arsenate reductase ArsC {Bacillus subtilis [TaxId:	93.66
d1ohea2	182	Proline directed phosphatase CDC14b2 {Human (Homo	93.27
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	91.48
d1jr6a_	138	HCV helicase domain {Human hepatitis C virus (HCV)	90.2
d1i9sa_	194	mRNA capping enzyme, triphosphatase domain {Mouse	90.14
d1rxda_	152	Protein tyrosine phosphatase type IVa {Human (Homo	90.02
d1jf8a_	130	Arsenate reductase ArsC {Staphylococcus aureus [Ta	89.23
d1m3ga_	145	Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax	88.99
d1mkpa_	144	Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp	88.25
d1hv8a2	155	Putative DEAD box RNA helicase {Archaeon Methanoco	85.81
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	84.94
d1fuka_	162	Initiation factor 4a {Baker's yeast (Saccharomyces	84.3
d1t5ia_	168	Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo	84.09
d1oywa3	200	RecQ helicase domain {Escherichia coli [TaxId: 562	82.8
d1y1la_	124	Arsenate reductase ArsC {Archaeoglobus fulgidus [T	82.7
d1s2ma2	171	Putative ATP-dependent RNA helicase DHH1 {Baker's	82.68
d1u9ya2	129	Phosphoribosylpyrophosphate synthetase {Methanocal	81.71
d1vkra_	97	PTS system mannitol-specific EIICBA component {Esc	81.62
d1a53a_	247	Indole-3-glycerophosphate synthase, IPGS {Archaeon	81.39
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	81.24

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.2e-29  Score=162.88  Aligned_cols=112  Identities=50%  Similarity=0.795  Sum_probs=99.4

Q ss_pred             eeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCch
Q 032621           12 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGAR   91 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~r   91 (137)
                      ...+++.++.++++.+.+|||||++.||..||||||  +|+|+............++..++...++++++||+||++|.|
T Consensus         7 p~~i~~~~a~~l~~~g~~liDvR~~~e~~~ghi~ga--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~C~~G~r   84 (119)
T d1tq1a_           7 PSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGR   84 (119)
T ss_dssp             CEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSH
T ss_pred             CCccCHHHHHHHHHCcCEEEECCCHHHHHcCCCCCc--cchhhcccccccccccHHHHHHHHHhcCCCcEEEEEcCCcCc
Confidence            357899999999998999999999999999999999  999987654444444567777777667899999999999999


Q ss_pred             HHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 032621           92 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK  125 (137)
Q Consensus        92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~  125 (137)
                      |..++..|.+.||+||++|+||+.+|.+.|+|++
T Consensus        85 s~~a~~~L~~~G~~nv~~l~GG~~~W~~~g~P~e  118 (119)
T d1tq1a_          85 SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  118 (119)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             HHHHHHHHHhcccCCeEEecChHHHHHHCCCCcc
Confidence            9999999999999999999999999999999975

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=6.8e-28  Score=157.92  Aligned_cols=105  Identities=22%  Similarity=0.448  Sum_probs=94.9

Q ss_pred             eeeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCC
Q 032621           12 VITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQS   88 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~   88 (137)
                      .+.|+++++.++++++  .+|||||++.||..||||||  +|+|..           ++...+.++ .+++++||+||.+
T Consensus        23 ~~~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpGA--i~ip~~-----------~l~~~~~~l~~~~~~~iV~~C~~   89 (136)
T d1yt8a1          23 TPSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGG--ISVPGA-----------ELVLRVAELAPDPRTRVIVNCAG   89 (136)
T ss_dssp             CCEECHHHHHHHHHTTCSEEEEECSCHHHHHHSBCTTC--EECCGG-----------GHHHHHHHHCCSTTSEEEEECSS
T ss_pred             CCccCHHHHHHHHhcCCCcEEEEcCChhhccceecCCc--hhhhhh-----------HHHHHhhcccccccceEEEEcCC
Confidence            4689999999999754  78999999999999999999  999985           677778777 5677889999999


Q ss_pred             CchHHHHHHHHHHCCccc-eeeccccHHHHHhCCCceecCCC
Q 032621           89 GARSLHATADLLGAGFKH-VSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~-v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      |.||..++.+|.+.||.+ |++|.||+.+|...|+|++++..
T Consensus        90 g~rs~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G~pve~g~~  131 (136)
T d1yt8a1          90 RTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQT  131 (136)
T ss_dssp             SHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             CCchHHHHHHHHHcCCCceEEEeCCcHHHHHHCCCCceeCCC
Confidence            999999999999999976 99999999999999999998754

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.7e-28  Score=153.37  Aligned_cols=102  Identities=24%  Similarity=0.368  Sum_probs=91.2

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ..+..||++++.+.++++ .+|||||++.||..||||||  +|+|..           ++...+..+ +++++||+||.+
T Consensus         2 ~~~~~Is~~e~~~~l~~~~~~liDvR~~~e~~~ghI~gA--~~ip~~-----------~l~~~~~~~-~~~~~ivv~c~~   67 (108)
T d1gmxa_           2 DQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQA--FHLTND-----------TLGAFMRDN-DFDTPVMVMCYH   67 (108)
T ss_dssp             CSCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTC--EECCHH-----------HHHHHHHHS-CTTSCEEEECSS
T ss_pred             CCCCEeCHHHHHHHHHCCCeEEEECCCHHHHHhcCCCCc--ccccch-----------hHHHHhhhc-cccCcccccCCC
Confidence            467899999999999774 99999999999999999999  999985           666666654 899999999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      |.||..++..|.+.||++|++|+||+.+|.+. +|++.
T Consensus        68 g~rs~~~a~~L~~~G~~~v~~l~GG~~~W~~~-~p~e~  104 (108)
T d1gmxa_          68 GNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV  104 (108)
T ss_dssp             SSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred             ChHHHHHHHHHHHcCCCCEEEEcChHHHHHHc-CCCcc
Confidence            99999999999999999999999999999754 77654

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.94  E-value=4.1e-27  Score=154.19  Aligned_cols=115  Identities=19%  Similarity=0.309  Sum_probs=96.5

Q ss_pred             CCceeeeCHHHHHHHhhCC-CEEEecCChHHHh--------ccCCCCceeeCcccccc-CCCCCC-CChHHHHHHHhh-c
Q 032621            9 GAEVITVDVRAAKNLLESG-YGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFN-TPEGRV-KNPDFLKKVRSL-C   76 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~--------~g~ipga~~inip~~~~-~~~~~~-~~~~~~~~~~~~-~   76 (137)
                      ....+.+|.+++.+.++++ .+|||+|++.||.        .||||||  +|+|+..+ ++.+.+ ...++.+.+... +
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R~~~ey~G~~~~~~~~GhIPGA--inip~~~~~~~~~~~~~~~~l~~~~~~~gi   85 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGI   85 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTC
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECcChHHhcccccccccCCcchhH--hhhhhhhhhccccccchhHHHhhhhhhccc
Confidence            3445689999999999874 8999999999995        6999999  99998654 333332 234677777776 8


Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCcee
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVK  125 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~  125 (137)
                      +++++||+||++|.||..+++.|+.+||+||++|+||+.+|.+. ++|++
T Consensus        86 ~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          86 TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             CCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            89999999999999999999999999999999999999999764 78875

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=5.1e-27  Score=157.10  Aligned_cols=107  Identities=22%  Similarity=0.300  Sum_probs=95.6

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      +.+..|+++++.++++++ .+|||||+..||+.||||||  +|+|..           .+...+... +++++||+||.+
T Consensus         2 P~~~~Is~~el~~~l~~~~~~ivDvR~~~e~~~ghIpga--~~~~~~-----------~~~~~~~~~-~~~~~vv~~c~~   67 (157)
T d1yt8a3           2 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGA--AWVLRS-----------QLKQALERL-GTAERYVLTCGS   67 (157)
T ss_dssp             CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTC--EECCGG-----------GHHHHHHHH-CCCSEEEEECSS
T ss_pred             CCCCEECHHHHHHHHhCCCeEEEEeCCHHHHhhcccccc--eecccc-----------ccccccccc-ccCcceeeccCC
Confidence            567899999999999875 89999999999999999999  999885           555555554 789999999999


Q ss_pred             CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621           89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                      |.||..++..|...||++|++|.||+.+|.+.|+|++++...
T Consensus        68 g~rs~~~a~~l~~~G~~~v~~L~GG~~~W~~aGlp~~~~~~~  109 (157)
T d1yt8a3          68 SLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESL  109 (157)
T ss_dssp             SHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred             cchHHHHHHHHhcccCceEEEecCCHHHHhhCCCCCcCCCCC
Confidence            999999999999999999999999999999999999986543

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.1e-26  Score=143.46  Aligned_cols=97  Identities=20%  Similarity=0.277  Sum_probs=85.3

Q ss_pred             eeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCC
Q 032621           13 ITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSG   89 (137)
Q Consensus        13 ~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g   89 (137)
                      ..+|++++.+.+.+  +++|||||++.||..||||||  +|+|..           .+...+... .+++++|++||.+|
T Consensus         2 ~v~S~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgA--i~~~~~-----------~~~~~~~~~~~~~~~~vv~~~~~g   68 (101)
T d1yt8a2           2 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFA--ANLPLS-----------RLELEIHARVPRRDTPITVYDDGE   68 (101)
T ss_dssp             EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTC--EECCGG-----------GHHHHHHHHSCCTTSCEEEECSSS
T ss_pred             CcCcHHHHHHHHHCCCCeEEEECCCHHHHHhccCCCc--cccccc-----------chhhhhhhcccccCceeeeccchh
Confidence            46889999998754  489999999999999999999  999985           555555555 56778999999999


Q ss_pred             chHHHHHHHHHHCCccceeeccccHHHHHhCCC
Q 032621           90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGL  122 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~  122 (137)
                      .+|..++..|.++||+||++|+||+.+|.++|+
T Consensus        69 ~~s~~~~~~l~~~G~~nV~~l~GG~~~W~~aGg  101 (101)
T d1yt8a2          69 GLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGG  101 (101)
T ss_dssp             SHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTC
T ss_pred             hhHHHHHHHHHHcCCCcEEEeCChHHHHHHCcC
Confidence            999999999999999999999999999998874

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.94  E-value=1.9e-26  Score=151.09  Aligned_cols=107  Identities=25%  Similarity=0.357  Sum_probs=91.0

Q ss_pred             CceeeeCHHHHHHHhhCC--CEEEecCChHHHhccCC---CCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEE
Q 032621           10 AEVITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHV---DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLV   83 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~i---pga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv   83 (137)
                      ..+..||++++.++++++  ++|||||++.||+.+||   +|+  +++|..           .+...+... ++++++||
T Consensus        20 ~~~~~Isp~e~~~ll~~~~~~~lIDvR~~~E~~~~hip~i~~a--~~ip~~-----------~l~~~~~~~~~~~~~~iv   86 (137)
T d1qxna_          20 ADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNY--KHMSRG-----------KLEPLLAKSGLDPEKPVV   86 (137)
T ss_dssp             HSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSE--EECCTT-----------TSHHHHHHHCCCTTSCEE
T ss_pred             ccCCEEcHHHHHHHHHcCcCEEEEECCcHHHHHHhcccccccc--ccCCcc-----------cccccccccccCccccee
Confidence            346799999999999654  99999999999999995   556  778874           333444443 68899999


Q ss_pred             EEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           84 VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        84 ~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      +||.+|.||..++..|..+||+||++|+||+.+|.+.|+|+.....
T Consensus        87 vyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~~~W~~~g~P~~~~~~  132 (137)
T d1qxna_          87 VFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH  132 (137)
T ss_dssp             EECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred             eeecccchHHHHHHHHHHcCCCcEEEecCHHHHHHHcCCCCCCCCc
Confidence            9999999999999999999999999999999999999999887543

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=1.1e-25  Score=148.62  Aligned_cols=120  Identities=21%  Similarity=0.361  Sum_probs=97.8

Q ss_pred             CCCCCceeeeCHHHHHHHhhCC-CEEEecCChHHHh------------ccCCCCceeeCcccccc-CCCCCCCChHHHHH
Q 032621            6 KSSGAEVITVDVRAAKNLLESG-YGYLDVRTAEEFK------------EGHVDAAKIFNIPYMFN-TPEGRVKNPDFLKK   71 (137)
Q Consensus         6 ~~~~~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~------------~g~ipga~~inip~~~~-~~~~~~~~~~~~~~   71 (137)
                      +.....-..++.+++++.++++ .+|||+|++.||.            .||||||  +|+|+..+ ...+.+..++..+.
T Consensus         4 ~~~~~~~~i~~~~ev~~~l~~~~~~iiD~R~~~ef~G~~~~~~~~~~~~GhIpgA--~~ip~~~~~~~~~~~~~~~~l~~   81 (144)
T d1rhsa2           4 KATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGS--VNMPFMNFLTEDGFEKSPEELRA   81 (144)
T ss_dssp             CCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTC--EECCGGGGBCTTSCBCCHHHHHH
T ss_pred             ecccChHHeecHHHHHHHhcCCCcEEEECCCCHHHcCCCCCCccccceeeehhhh--hhcchhhhhhhhcccCCHHHHHH
Confidence            4444555689999999999875 8999999999995            6999999  99998764 45555555555555


Q ss_pred             HHhh--ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCC---CceecC
Q 032621           72 VRSL--CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG---LKVKAR  127 (137)
Q Consensus        72 ~~~~--~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~---~p~~~~  127 (137)
                      +...  ++++++||+||++|.||+.+++.|..+||++|.+|+|||..|.+.+   .|++++
T Consensus        82 ~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p~~pV~~G  142 (144)
T d1rhsa2          82 MFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQG  142 (144)
T ss_dssp             HHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred             HHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCCCCCcCCC
Confidence            5443  8899999999999999999999999999999999999999998765   444443

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.1e-25  Score=149.00  Aligned_cols=116  Identities=20%  Similarity=0.248  Sum_probs=95.6

Q ss_pred             eeeCHHHHHHHhhC-CCEEEecC----------ChHHHhccCCCCceeeCccccccC-CC----CCC-CChHHHHHHHhh
Q 032621           13 ITVDVRAAKNLLES-GYGYLDVR----------TAEEFKEGHVDAAKIFNIPYMFNT-PE----GRV-KNPDFLKKVRSL   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~-~~~viDvR----------~~~e~~~g~ipga~~inip~~~~~-~~----~~~-~~~~~~~~~~~~   75 (137)
                      ..||++++.+.+++ +++|||+|          ..++|..||||||  +|+++..+. +.    ..+ +..++.+.+.++
T Consensus         3 ~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGA--i~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~   80 (147)
T d1urha1           3 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGA--VFFDIEALSDHTSPLPHMLPRPETFAVAMREL   80 (147)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC--EECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred             ccCcHHHHHHHhCCCCeEEEEeeCCCCCccCccHHHHHHhCCcccc--EEeehhhhccccccccccCCCHHHHHHHHHHh
Confidence            46899999999986 48999999          3468999999999  888876542 11    122 345677777777


Q ss_pred             -ccCCCcEEEEeCC-CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621           76 -CKEEDRLVVGCQS-GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        76 -~~~~~~iv~~c~~-g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                       +.++++||+||.+ +..|.++++.|+.+||++|++|+||+.+|.++++|++++...
T Consensus        81 Gi~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g~pv~~~~~~  137 (147)
T d1urha1          81 GVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVE  137 (147)
T ss_dssp             TCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCCC
T ss_pred             CcCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcCCCccCCCCC
Confidence             9999999999986 457899999999999999999999999999999999987653

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=2.3e-25  Score=147.84  Aligned_cols=116  Identities=20%  Similarity=0.192  Sum_probs=95.4

Q ss_pred             eeeCHHHHHHHhhC-----CCEEEecC--------ChHHHhccCCCCceeeCccccccCCC-----CC-CCChHHHHHHH
Q 032621           13 ITVDVRAAKNLLES-----GYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GR-VKNPDFLKKVR   73 (137)
Q Consensus        13 ~~is~~~~~~~~~~-----~~~viDvR--------~~~e~~~g~ipga~~inip~~~~~~~-----~~-~~~~~~~~~~~   73 (137)
                      ..||++++.+.+++     +++|||+|        ..++|..||||||  +++++..+...     .. .....|.+.+.
T Consensus         8 ~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~~~~~~~y~~gHIPGA--v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   85 (149)
T d1rhsa1           8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGA--SFFDIEECRDKASPYEVMLPSEAGFADYVG   85 (149)
T ss_dssp             SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTC--EECCTTTSSCTTSSSSSCCCCHHHHHHHHH
T ss_pred             CccCHHHHHHHHhccCCCCCEEEEEecCcCCCCcchHHHHHHhcccCc--eeccHHhhcccccchhhhhhhhHHHHHHHh
Confidence            58999999999974     47999999        4578999999999  88877654211     12 23346777777


Q ss_pred             hh-ccCCCcEEEEeCC---CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621           74 SL-CKEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP  130 (137)
Q Consensus        74 ~~-~~~~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~  130 (137)
                      .. +.++++||+||.+   +..|.+++|.|+.+||++|++|+||+.+|.++|+|++++.+.
T Consensus        86 ~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G~pv~~~~~~  146 (149)
T d1rhsa1          86 SLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSR  146 (149)
T ss_dssp             HTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCC
T ss_pred             hhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCcCcccCCCCC
Confidence            77 8999999999974   458999999999999999999999999999999999886543

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=1e-25  Score=148.62  Aligned_cols=115  Identities=19%  Similarity=0.246  Sum_probs=94.0

Q ss_pred             eeeCHHHHHHHhhCC-CEEEecCC-hHHHhccCCCCceeeCcccccc--C-CCCCC-CChHHHHHHHhh-ccCCCcEEEE
Q 032621           13 ITVDVRAAKNLLESG-YGYLDVRT-AEEFKEGHVDAAKIFNIPYMFN--T-PEGRV-KNPDFLKKVRSL-CKEEDRLVVG   85 (137)
Q Consensus        13 ~~is~~~~~~~~~~~-~~viDvR~-~~e~~~g~ipga~~inip~~~~--~-~~~~~-~~~~~~~~~~~~-~~~~~~iv~~   85 (137)
                      ..||++++.+.+++. ++|||+|. ..+|..||||||  +|+++...  . ....+ ...+|.+.+.++ +.++++||+|
T Consensus         7 ~lVs~~~l~~~l~~~~v~iiDvr~~~~~y~~gHIPgA--i~~~~~~~~~~~~~~~l~~~~~l~~~~~~~Gi~~~~~iVvy   84 (143)
T d1uara1           7 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGA--QKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLY   84 (143)
T ss_dssp             GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTC--EEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             ccCcHHHHHHHhCCCCeEEEECCCCHHHHhcCCCCCc--ccccccccccccccccchhhHHHHHHhhhhccCCCceEEEe
Confidence            479999999998764 89999995 788999999999  88876432  1 11222 334566677776 8999999999


Q ss_pred             eCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           86 CQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        86 c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      |++|. .|.++++.|+.+|+++|++|+||+.+|..+|+|+++...
T Consensus        85 ~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g~p~~~~~~  129 (143)
T d1uara1          85 GDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP  129 (143)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred             cCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCCCCccCCCC
Confidence            98765 688899999999999999999999999999999998653

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.2e-25  Score=146.08  Aligned_cols=101  Identities=22%  Similarity=0.246  Sum_probs=86.8

Q ss_pred             ceeeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEe
Q 032621           11 EVITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGC   86 (137)
Q Consensus        11 ~~~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c   86 (137)
                      .+..|+++++.+++..+   ++|||||++.||..||||||  +|+|+.           ++....... ..++++||+||
T Consensus        21 ~~~~I~~~e~~~~l~~~~~~~~liDvR~~~e~~~ghipga--i~~p~~-----------~~~~~~~~~~~~~~~~ivl~C   87 (130)
T d1yt8a4          21 GVERLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGS--RSTPGG-----------QLVQETDHVASVRGARLVLVD   87 (130)
T ss_dssp             TCEEECHHHHHHHHHCTTSCEEEEECSCHHHHHHCBCTTC--EECCHH-----------HHHHSHHHHCCSBTCEEEEEC
T ss_pred             CCcccCHHHHHHHHHccCCCEEEEECCCcHHHhcCccCCc--cccccc-----------ccccccccccCCccceEEeec
Confidence            46899999999999753   68999999999999999999  999985           454444444 67889999999


Q ss_pred             CCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 032621           87 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK  125 (137)
Q Consensus        87 ~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~  125 (137)
                      .+|.||..++.+|+++|| ++++|+||+.+|...+....
T Consensus        88 ~~G~rS~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g~~~  125 (130)
T d1yt8a4          88 DDGVRANMSASWLAQMGW-QVAVLDGLSEADFSERGAWS  125 (130)
T ss_dssp             SSSSHHHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCC
T ss_pred             CCCccHHHHHHHHHHcCC-CeEEEcCchHHHHHhcCCCC
Confidence            999999999999999999 59999999999977765433

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=8.5e-25  Score=143.78  Aligned_cols=112  Identities=26%  Similarity=0.447  Sum_probs=89.9

Q ss_pred             eCHHHHHHHhh---C-CCEEEecCChHHHh----------------ccCCCCceeeCcccccc-CCCCCCCChH-HHHHH
Q 032621           15 VDVRAAKNLLE---S-GYGYLDVRTAEEFK----------------EGHVDAAKIFNIPYMFN-TPEGRVKNPD-FLKKV   72 (137)
Q Consensus        15 is~~~~~~~~~---~-~~~viDvR~~~e~~----------------~g~ipga~~inip~~~~-~~~~~~~~~~-~~~~~   72 (137)
                      ...+++++.+.   . +.+|||+|+++||.                .||||||  +|+|+..+ +..+.+.+++ +.+.+
T Consensus         4 a~~~~v~~~~~~~~~~~~~lvD~R~~~ey~G~~~~~~~~~~~~~~r~GhIpgA--~nlp~~~~~~~~~~~~~~~~~~~~~   81 (141)
T d1uara2           4 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGA--KNIPWAKAVNPDGTFKSAEELRALY   81 (141)
T ss_dssp             ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhhCCCcEEEeCCCHHHcCCccCcccccCcccceeeeEeCCc--cccccccccccccccccHHHHHHHH
Confidence            45566665553   2 48899999999996                6999999  99999765 4455555444 44455


Q ss_pred             Hhh-ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecCC
Q 032621           73 RSL-CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKARE  128 (137)
Q Consensus        73 ~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~~~w~~-~~~p~~~~~  128 (137)
                      ... +.++++||+||++|.+|+.+++.|.. +||++|++|+||+.+|.+ .++|++++.
T Consensus        82 ~~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          82 EPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             GGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             HHhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            444 88999999999999999999999986 899999999999999976 599998864

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.92  E-value=1.6e-24  Score=140.79  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=89.3

Q ss_pred             eeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCC-----CCCChH-HHHHHHhh-ccCCCcEEE
Q 032621           13 ITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG-----RVKNPD-FLKKVRSL-CKEEDRLVV   84 (137)
Q Consensus        13 ~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~-----~~~~~~-~~~~~~~~-~~~~~~iv~   84 (137)
                      ..|+++++.+++++ +++|||||+.+||..||||||  +|+|+..+....     ...... +....... ......+++
T Consensus         9 ~lIs~~el~~~l~~~~~viiDvR~~~ey~~gHIpgA--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   86 (135)
T d1e0ca1           9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGA--RFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVV   86 (135)
T ss_dssp             SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTC--EECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEE
T ss_pred             cEeeHHHHHHHhcCCCeEEEECCCHHHHhcccCccc--cccchhhhhhcccccchhhcchhhhhhhhccccccccccccc
Confidence            46899999999976 489999999999999999999  888876652221     122223 33333333 455666777


Q ss_pred             EeC-CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           85 GCQ-SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        85 ~c~-~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                      ||. ++.++.++++.|+.+||+||++|+||+.+|.++|+|++++.+
T Consensus        87 ~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g~p~~~~~p  132 (135)
T d1e0ca1          87 YDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (135)
T ss_dssp             ECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             cccccCccchhhHHHHHhccCCCEEEecChHHHHHHCCCCCCCCCC
Confidence            765 567899999999999999999999999999999999998654

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=4e-24  Score=136.68  Aligned_cols=102  Identities=23%  Similarity=0.362  Sum_probs=85.6

Q ss_pred             eeCHHHHHHHhhCC-CEEEecCChHHHh-----------ccCCCCceeeCccccccCCCCCCCChH-HHHHHHhh-ccCC
Q 032621           14 TVDVRAAKNLLESG-YGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNTPEGRVKNPD-FLKKVRSL-CKEE   79 (137)
Q Consensus        14 ~is~~~~~~~~~~~-~~viDvR~~~e~~-----------~g~ipga~~inip~~~~~~~~~~~~~~-~~~~~~~~-~~~~   79 (137)
                      .++.+|++...+++ .+|||+|++++|.           .||||||  +|+|+..+.....+.+.+ +...+... ++++
T Consensus         5 ~~~~~ev~~~~~~~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   82 (120)
T d1urha2           5 VVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGVSYD   82 (120)
T ss_dssp             BCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTC--EECCGGGGBSSSSBCCHHHHHHHHHTTTCCSS
T ss_pred             HccHHHHHHHhhCCCcEEEeCCCHHHcCcccCCccccccccccccc--chhchhhcccccccCCHHHhhhhhhhcccCcc
Confidence            57889998888765 8999999999995           6999999  999987765555555444 44455444 8899


Q ss_pred             CcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621           80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      ++||+||++|.||..+++.|+.+||++|++|+||+.+|
T Consensus        83 ~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          83 KPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             SCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             CceEEEccchhHHHHHHHHHHHcCCCCceEcCCChhhC
Confidence            99999999999999999999999999999999999888

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=2.6e-24  Score=139.92  Aligned_cols=109  Identities=18%  Similarity=0.244  Sum_probs=86.3

Q ss_pred             CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621           10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS   88 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~   88 (137)
                      ..+..|+++++.++++++ .+|||||++.||+.||||||  +|+|+..+.        +....+...+.+.+.+|+||..
T Consensus         5 ~~v~~I~~~el~~~~~~~~v~iIDvR~~~e~~~ghIpgA--inip~~~~~--------~~~~~~~~~~~~~~~iv~~c~~   74 (132)
T d1t3ka_           5 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGS--LHYASGSFD--------DKISHLVQNVKDKDTLVFHSAL   74 (132)
T ss_dssp             SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSS--EEECCSSSS--------TTHHHHHHTCCSCCEEEESSSC
T ss_pred             cCCCEECHHHHHHHHhCCCeEEEEccCHHHHHhccCccc--ceeeeeccc--------ccccccccccccccceEEEecc
Confidence            447899999999999775 78999999999999999999  999986331        1223333334677889999986


Q ss_pred             Cc-hHHHHHHHHH--------HCCccceeeccccHHHHHhCCCceecCC
Q 032621           89 GA-RSLHATADLL--------GAGFKHVSNFGGGHMAWVQNGLKVKARE  128 (137)
Q Consensus        89 g~-ra~~~~~~l~--------~~G~~~v~~l~GG~~~w~~~~~p~~~~~  128 (137)
                      |. |+..++..|.        ..||+||++|+||+.+|.+.|+|+.+..
T Consensus        75 ~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~pv~~~~  123 (132)
T d1t3ka_          75 SQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA  123 (132)
T ss_dssp             CSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred             ccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcCCCcccCC
Confidence            54 6666555443        4699999999999999999999998754

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=3.4e-23  Score=137.84  Aligned_cols=113  Identities=18%  Similarity=0.182  Sum_probs=91.6

Q ss_pred             eeeCHHHHHHHhhCCCEEEecC--------ChHHHhccCCCCceeeCcccccc--CC--C----CCC-CChHHHHHHHhh
Q 032621           13 ITVDVRAAKNLLESGYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFN--TP--E----GRV-KNPDFLKKVRSL   75 (137)
Q Consensus        13 ~~is~~~~~~~~~~~~~viDvR--------~~~e~~~g~ipga~~inip~~~~--~~--~----~~~-~~~~~~~~~~~~   75 (137)
                      ..||++++.+.+++ ++|||+|        ..++|..||||||  ++++++..  .+  .    ..+ +...|.+.+.++
T Consensus         8 ~lvs~~~L~~~l~d-~~iiD~r~~l~~~~~g~~~Y~~gHIPGA--~~~d~~~~l~~~~~~~~~~~~lP~~~~~~~~l~~l   84 (156)
T d1okga1           8 VFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSA--IRADVDTNLSKLVPTSTARHPLPPCAEFIDWCMAN   84 (156)
T ss_dssp             CEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTC--EECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHT
T ss_pred             cEeCHHHHHHhcCC-CEEEEeeccCCCCcchHHHHHHcCCCCC--eEcCHHHhcccccCCCCCccccCCHHHHHHHHHhc
Confidence            48999999998875 8999999        4688999999999  66665332  11  1    112 335788888887


Q ss_pred             -ccCCCcEEEEeCC-C-chHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621           76 -CKEEDRLVVGCQS-G-ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK  129 (137)
Q Consensus        76 -~~~~~~iv~~c~~-g-~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~  129 (137)
                       ++++++||+||+. | ..|.+++|.|+.+|+ +|++|+||+.+|.++|+|++++.+
T Consensus        85 GI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G~pv~t~~p  140 (156)
T d1okga1          85 GMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP  140 (156)
T ss_dssp             TCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred             cccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCCCCCCCCCC
Confidence             9999999999965 3 479999999999998 699999999999999999988653

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.88  E-value=1.8e-23  Score=137.14  Aligned_cols=102  Identities=18%  Similarity=0.301  Sum_probs=79.0

Q ss_pred             hhCCCEEEecCChHHHh-----------ccCCCCceeeCcccccc-CCC---CCCCCh-HHHHHHHhh------ccCCCc
Q 032621           24 LESGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPE---GRVKNP-DFLKKVRSL------CKEEDR   81 (137)
Q Consensus        24 ~~~~~~viDvR~~~e~~-----------~g~ipga~~inip~~~~-~~~---~~~~~~-~~~~~~~~~------~~~~~~   81 (137)
                      +..+.+|||+|++++|.           .||||||  +|+|+..+ ...   ..+..+ ++.+.+...      +.++++
T Consensus         9 ~~p~~vlvD~R~~~ef~G~~~~~~~~~~~GHIpgA--vnip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   86 (139)
T d1okga2           9 IPPQAIITDARSADRFASTVRPYAADKMPGHIEGA--RNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSS   86 (139)
T ss_dssp             SCTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTC--EECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTT
T ss_pred             CCCCeEEEeCCCHHHhCCcCCCcccCCcCceeCCC--eeccchhhccccccccccCCHHHhhhhhhhhhhhccCCCCCCe
Confidence            44468999999999997           7999999  99998643 221   222333 344444322      456789


Q ss_pred             EEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 032621           82 LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR  127 (137)
Q Consensus        82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~  127 (137)
                      ||+||++|.||+.+++.|+.+||++|.+|+||+.+|.+ .++|++++
T Consensus        87 vV~yC~sG~~Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~  133 (139)
T d1okga2          87 FVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  133 (139)
T ss_dssp             SEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             EEEECCCcHHHHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeec
Confidence            99999999999999999999999999999999999976 57888764

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-21  Score=131.12  Aligned_cols=106  Identities=13%  Similarity=0.184  Sum_probs=82.2

Q ss_pred             CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-----c
Q 032621            9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-----C   76 (137)
Q Consensus         9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-----~   76 (137)
                      .+.++.|+++++.+++++       +++|||||++.||..||||||  +|+|..          ..+...+...     .
T Consensus        19 ~~~~k~Is~~~l~~ll~~~~~~~~~~~~IIDvR~~~Ey~~gHI~gA--inip~~----------~~~~~~l~~~~~~~~~   86 (161)
T d1c25a_          19 HQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGA--VNLHME----------EEVEDFLLKKPIVPTD   86 (161)
T ss_dssp             CTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH----------HHHHHHTTTSCCCCCT
T ss_pred             CCCCCccCHHHHHHHHhhhhhcccCCEEEEECCCHHHHHhhhcCCc--EEcCcH----------HHHHHHHhhhhhhhhh
Confidence            345789999999999874       379999999999999999999  999874          1223333222     1


Q ss_pred             cCCCcEEEEeC-CCchHHHHHHHHHHC----------CccceeeccccHHHHHhCCCceec
Q 032621           77 KEEDRLVVGCQ-SGARSLHATADLLGA----------GFKHVSNFGGGHMAWVQNGLKVKA  126 (137)
Q Consensus        77 ~~~~~iv~~c~-~g~ra~~~~~~l~~~----------G~~~v~~l~GG~~~w~~~~~p~~~  126 (137)
                      .+...||+||. +|.|+..++..|+..          ||++|++|+||+.+|.+..-++-.
T Consensus        87 ~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~p~lc~  147 (161)
T d1c25a_          87 GKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCE  147 (161)
T ss_dssp             TSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEE
T ss_pred             ccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHHCcCccC
Confidence            22345899997 688999999988753          999999999999999877655544

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=122.81  Aligned_cols=102  Identities=16%  Similarity=0.222  Sum_probs=79.5

Q ss_pred             CceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHh-h------
Q 032621           10 AEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS-L------   75 (137)
Q Consensus        10 ~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~-~------   75 (137)
                      ..++.|+++++.+++.+       +++|||+|++.||..|||+||  +|+|..           .+...... .      
T Consensus        20 ~~~k~Isp~eL~~ll~~~~~~~~~~~lIID~R~~~Ey~~gHI~gA--iNi~~~-----------~~~~~~~~~~~~~~~~   86 (174)
T d1ymka1          20 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPCS   86 (174)
T ss_dssp             TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHTTTCCC--
T ss_pred             CCCcEeCHHHHHHHHhhhhhcccCCEEEEECCCchhhhhhhcCCc--cccCch-----------HHHHHHHHHhhhhhhh
Confidence            45778999999999974       279999999999999999999  999985           33332211 1      


Q ss_pred             ccCCCcEEEEeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCce
Q 032621           76 CKEEDRLVVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKV  124 (137)
Q Consensus        76 ~~~~~~iv~~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~  124 (137)
                      ..+...||+||. ++.|+..++..|+.          .|+++|++|+||+.+|.+..-.+
T Consensus        87 ~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~yP~l  146 (174)
T d1ymka1          87 LDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF  146 (174)
T ss_dssp             --CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred             hccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHhCchh
Confidence            234456999998 46689999988874          49999999999999997764333

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.7e-19  Score=113.48  Aligned_cols=106  Identities=9%  Similarity=0.104  Sum_probs=74.5

Q ss_pred             eeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCC------CChHHHHHHHhhccCCCcEEE
Q 032621           14 TVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRV------KNPDFLKKVRSLCKEEDRLVV   84 (137)
Q Consensus        14 ~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~------~~~~~~~~~~~~~~~~~~iv~   84 (137)
                      .||++++.+++++.   .+|||+|+..||..+|||||  +|||...+......      ........+.. ....+.||+
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR~~~ey~~~hI~gA--inip~~~l~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~iV~   78 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLPDDSKDTWKK-RGNVEYVVL   78 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTC--EECCGGGCCTTCCHHHHHHTSCHHHHHHHHT-TTTSSEEEE
T ss_pred             eECHHHHHHHHhcCCCCEEEEEecCCccccCCccCCe--EEeCHHHcccccchhhhhhhhhHHHHHHHhc-cCCCCeEEE
Confidence            68999999999763   88999999999999999999  99998766432211      11122222222 356778999


Q ss_pred             EeCCCc-hH-------HHHHHHHH-----HCCccceeeccccHHHHHhCCC
Q 032621           85 GCQSGA-RS-------LHATADLL-----GAGFKHVSNFGGGHMAWVQNGL  122 (137)
Q Consensus        85 ~c~~g~-ra-------~~~~~~l~-----~~G~~~v~~l~GG~~~w~~~~~  122 (137)
                      ||..+. ++       ....+.|.     ..|..+|++|+||+.+|.+..-
T Consensus        79 yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~yp  129 (135)
T d2gwfa1          79 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLCYP  129 (135)
T ss_dssp             ECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHHCG
T ss_pred             EeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHhCh
Confidence            998754 22       11223333     3577889999999999988743

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-17  Score=109.97  Aligned_cols=104  Identities=16%  Similarity=0.128  Sum_probs=72.1

Q ss_pred             eeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCcccccc----------CCCCCCCChHHHHHHHhhccCC
Q 032621           13 ITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFN----------TPEGRVKNPDFLKKVRSLCKEE   79 (137)
Q Consensus        13 ~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~----------~~~~~~~~~~~~~~~~~~~~~~   79 (137)
                      ..+|++++.+.++.   +.+|||+|+..||..||||||  +|+|+...          .....+........+... ...
T Consensus        16 ~~~s~e~L~~~l~~~~~~~lilDvR~~~ey~~~HI~gA--ini~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   92 (154)
T d1hzma_          16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESA--INVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRR-CGT   92 (154)
T ss_dssp             SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSC--CCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHS-TTS
T ss_pred             CccCHHHHHHHHhcCCCCEEEEECCCHHHHhcCCCCCC--cccCcHHHHhhhccCCcccccccCCcHHHHHHHhhc-CCC
Confidence            46889999999863   489999999999999999999  88776432          011122333344444333 567


Q ss_pred             CcEEEEeCCCc----------hHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621           80 DRLVVGCQSGA----------RSLHATADLLGAGFKHVSNFGGGHMAWVQN  120 (137)
Q Consensus        80 ~~iv~~c~~g~----------ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~  120 (137)
                      +.||+||..|.          +.......|...|+ +|++|+||+.+|.+.
T Consensus        93 ~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~v~iL~GG~~~w~~~  142 (154)
T d1hzma_          93 DTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGC-RAFYLEGGFSKFQAE  142 (154)
T ss_dssp             SCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTC-CCEECCCCHHHHHHH
T ss_pred             CeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCC-eEEEEeCcHHHHHHH
Confidence            78999998643          22333344555565 699999999999875

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.13  E-value=0.00044  Score=43.84  Aligned_cols=97  Identities=10%  Similarity=0.016  Sum_probs=54.6

Q ss_pred             eCHHHHHHHhhCC-CEEEecCChHHHhc----cCCCCceeeCccccccCCCCCCCChHHHHHHHhh-c-cCCCcEEEEeC
Q 032621           15 VDVRAAKNLLESG-YGYLDVRTAEEFKE----GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-C-KEEDRLVVGCQ   87 (137)
Q Consensus        15 is~~~~~~~~~~~-~~viDvR~~~e~~~----g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~iv~~c~   87 (137)
                      .+++++..+.+.+ ..|||+|+..+...    -.-.|..++++|.............+....+... . ..+.+++++|.
T Consensus        21 ~t~~~~~~L~~lgIktIidLr~~~e~~~~~~~~~~~gi~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvlvHC~  100 (151)
T d1xria_          21 PDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCK  100 (151)
T ss_dssp             CCHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECS
T ss_pred             CCHHHHHHHHHCCCCEEEECCCcchhhcccchhhhcCceEeecCccccccccccccHHHHHHHHHHHhcCCCCCEEEEcC
Confidence            5677776555556 68999997644321    1112445677776533222212222333333332 2 35678999999


Q ss_pred             CCc-hHHHHHH-HHHHCCccceeecc
Q 032621           88 SGA-RSLHATA-DLLGAGFKHVSNFG  111 (137)
Q Consensus        88 ~g~-ra~~~~~-~l~~~G~~~v~~l~  111 (137)
                      .|. |+..++. .+...|++.-.+++
T Consensus       101 ~GkdRTG~v~a~~l~~~g~~~~~i~~  126 (151)
T d1xria_         101 RGKHRTGCLVGCLRKLQKWCLTSIFD  126 (151)
T ss_dssp             SSSSHHHHHHHHHHHHTTBCHHHHHH
T ss_pred             CCchHHHHHHHHHHHHcCCCHHHHHH
Confidence            996 7666654 45558986443443

>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Mycobacterial PtpB-like
domain: Phosphotyrosine protein phosphatase PtpB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.22  E-value=0.059  Score=36.89  Aligned_cols=43  Identities=21%  Similarity=0.380  Sum_probs=27.4

Q ss_pred             eeeeCHHHHHHHhhCC-CEEEecCChHHHhc---cCCC-CceeeCccc
Q 032621           12 VITVDVRAAKNLLESG-YGYLDVRTAEEFKE---GHVD-AAKIFNIPY   54 (137)
Q Consensus        12 ~~~is~~~~~~~~~~~-~~viDvR~~~e~~~---g~ip-ga~~inip~   54 (137)
                      +..++.++...+-+-+ ..|||.|+..|...   ..+| |....++|+
T Consensus        30 l~~lt~~d~~~L~~lgI~tViDLRs~~E~~~~~~~~~~~~~~~~~~p~   77 (272)
T d1ywfa1          30 LSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPF   77 (272)
T ss_dssp             CTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCC
T ss_pred             cCcCCHHHHHHHHHCCCcEEEECCCHHHHhhcCCCCCCCCceEEEecC
Confidence            3567888877654446 68999999999753   2233 334445554

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=94.55  E-value=0.02  Score=37.03  Aligned_cols=48  Identities=15%  Similarity=0.160  Sum_probs=41.1

Q ss_pred             HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      ++.+++.+...++.++++||.+=..+...+..|.+.|++ +..+.|++.
T Consensus        19 dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~-a~~~Hg~~~   66 (174)
T d1c4oa2          19 DLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIR-ARYLHHELD   66 (174)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTCC
T ss_pred             HHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHHhcCCc-eEEEecccc
Confidence            566666665668889999999988999999999999997 889999864

>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Kinase associated phosphatase (kap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.077  Score=33.92  Aligned_cols=82  Identities=15%  Similarity=0.129  Sum_probs=46.3

Q ss_pred             HHHHHHHhhCC-CEEEecCChHHHhccCCC---------CceeeCccccccCCCCCCCCh---HHHHHHHhhccCCCcEE
Q 032621           17 VRAAKNLLESG-YGYLDVRTAEEFKEGHVD---------AAKIFNIPYMFNTPEGRVKNP---DFLKKVRSLCKEEDRLV   83 (137)
Q Consensus        17 ~~~~~~~~~~~-~~viDvR~~~e~~~g~ip---------ga~~inip~~~~~~~~~~~~~---~~~~~~~~~~~~~~~iv   83 (137)
                      .+++..+.+.+ ..||.+-+..|+..-.++         |-.+.++|+....   ..+..   ++.+.+.+.+..+.+|+
T Consensus        37 ~~dl~~L~~~gi~~Vv~L~~~~E~~~~~~~~~~~~~~~~gi~~~~~p~~D~~---~p~~~~~~~~~~~i~~~l~~~~~V~  113 (176)
T d1fpza_          37 QKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGG---TPDIASCCEIMEELTTCLKNYRKTL  113 (176)
T ss_dssp             HHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTC---CCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHhCCCCEEEEeCChhhhhhcCCCcHHHHHHHcCCEEEeCCccCCC---chhhHHHHHHHHHHHHHHHcCCeEE
Confidence            44455555556 568988887776543333         2244566653221   11112   33334433366788899


Q ss_pred             EEeCCCc-hHHHH-HHHHHH
Q 032621           84 VGCQSGA-RSLHA-TADLLG  101 (137)
Q Consensus        84 ~~c~~g~-ra~~~-~~~l~~  101 (137)
                      ++|..|. |+..+ +.+|..
T Consensus       114 VHC~~G~gRtg~v~~~~Li~  133 (176)
T d1fpza_         114 IHSYGGLGRSCLVAACLLLY  133 (176)
T ss_dssp             EECSSSSSHHHHHHHHHHHH
T ss_pred             EEecCCCCchHHHHHHHHHH
Confidence            9999887 66555 445544

>d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Phosphotyrosine protein phosphatases I-like
superfamily: Phosphotyrosine protein phosphatases I
family: Low-molecular-weight phosphotyrosine protein phosphatases
domain: Arsenate reductase ArsC
species: Bacillus subtilis [TaxId: 1423]

Probab=93.66  E-value=0.025  Score=34.64  Aligned_cols=37  Identities=14%  Similarity=0.002  Sum_probs=30.4

Q ss_pred             CCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621           79 EDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        79 ~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      ++.|+|+|.+.. ||..|...|+.++-+++.+..+|+.
T Consensus         1 ~K~ILFVC~gN~cRSpmAEai~~~~~~~~~~~~Sag~~   38 (137)
T d1jl3a_           1 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIE   38 (137)
T ss_dssp             CEEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESS
T ss_pred             CCEEEEEeCCChhHHHHHHHHHHHhCCCCeeecccccc
Confidence            367999999876 9999999999887777777777764

>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Proline directed phosphatase CDC14b2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.25  Score=31.58  Aligned_cols=86  Identities=6%  Similarity=0.045  Sum_probs=47.7

Q ss_pred             eeCHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC
Q 032621           14 TVDVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ   87 (137)
Q Consensus        14 ~is~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~   87 (137)
                      .-+++++.+.+.+ + ..||+++..    ..+..-.|   .+.++|......   .+...+...+......+.+|++.|.
T Consensus        44 ~~~~~~~l~~l~~~gi~~Ii~l~~~~~~~~~~~~~gi---~~~~~p~~D~~~---P~~~~i~~~i~~~~~~~~~V~VHC~  117 (182)
T d1ohea2          44 QHSPETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF---DHHDLFFADGST---PTDAIVKEFLDICENAEGAIAVHSK  117 (182)
T ss_dssp             BCCTHHHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC---EEEECCCCTTCC---CCHHHHHHHHHHHHSCSSEEEEECS
T ss_pred             ccCHHHHHHHHHhcCCCEEEEecCCCcCccccccCCc---EEEecCCCCCCC---cCHHHHHHHHHHHHcCCCcEEEEeC
Confidence            3355677776655 4 468999753    33333333   445666642211   1122333344333567889999999


Q ss_pred             CCc-hHH-HHHHHH-HHCCcc
Q 032621           88 SGA-RSL-HATADL-LGAGFK  105 (137)
Q Consensus        88 ~g~-ra~-~~~~~l-~~~G~~  105 (137)
                      .|. |+. .++.+| ...|++
T Consensus       118 ~G~gRsgt~~a~yL~~~~~~~  138 (182)
T d1ohea2         118 AGLGRTGTLIACYIMKHYRMT  138 (182)
T ss_dssp             SSSHHHHHHHHHHHHHHHCCC
T ss_pred             CCCcchHHHHHHHHHHHcCCC
Confidence            998 765 344444 456764

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=91.48  E-value=0.12  Score=33.34  Aligned_cols=48  Identities=21%  Similarity=0.246  Sum_probs=39.5

Q ss_pred             HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      ++..++.+.+.++..++++|++-..+..++..|...|++ +..+.|+..
T Consensus        19 ~ll~~i~~~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~-~~~~hg~~~   66 (181)
T d1t5la2          19 DLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIK-VAYLHSEIK   66 (181)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHTTTCC-EEEECSSCC
T ss_pred             HHHHHHHHHHhcCCeEEEEeehhhhhHHHHHHHHhCCcc-eeEecCCcc
Confidence            456666555567788999999988999999999999997 889998864

>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RNA helicase
domain: HCV helicase domain
species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

Probab=90.20  E-value=0.14  Score=31.47  Aligned_cols=36  Identities=19%  Similarity=0.326  Sum_probs=31.3

Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      ++...++||++-..+..++..|.+.|++ +..+.||.
T Consensus        34 ~~~k~IVFc~t~~~ae~la~~L~~~G~~-~~~~H~~~   69 (138)
T d1jr6a_          34 KGGRHLIFCHSKKKCDELAAKLVALGIN-AVAYYRGL   69 (138)
T ss_dssp             TTSCEEEECSCHHHHHHHHHHHHHHTCE-EEEECTTC
T ss_pred             CCCCEEEEeCcHHHHHHHHHHHhccccc-hhhhhccc
Confidence            5567899999999999999999999996 77888764

>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: mRNA capping enzyme, triphosphatase domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.14  E-value=1.4  Score=28.07  Aligned_cols=87  Identities=15%  Similarity=0.195  Sum_probs=45.6

Q ss_pred             eeeCHHHHHHHhhC---C-CEEEecCC------hHHHhccCCCCceeeCccccccCCCCCCCCh----HHHHHHHhhc--
Q 032621           13 ITVDVRAAKNLLES---G-YGYLDVRT------AEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLC--   76 (137)
Q Consensus        13 ~~is~~~~~~~~~~---~-~~viDvR~------~~e~~~g~ipga~~inip~~~~~~~~~~~~~----~~~~~~~~~~--   76 (137)
                      ...++.++...++.   + ..|||+..      ..+|....|   .++++|....   ......    .|.+.+...+  
T Consensus        39 ~~~~~~~v~~~~~~~~~~~~~vinlt~~~~~Y~~~~~~~~gi---~~~~~~~~~~---~~~P~~~~~~~f~~~v~~~~~~  112 (194)
T d1i9sa_          39 NRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKEGI---KYIKLQCKGH---GECPTTENTETFIRLCERFNER  112 (194)
T ss_dssp             GCCCHHHHHHHHHHTTCCEEEEEECSSCSSSSCTHHHHTTTC---EEEECCCCCT---TCCCCHHHHHHHHHHHTTC---
T ss_pred             ccCCHHHHHHHHHhhCCCceEEEEccCCCCCcCHHHHHhcCc---eEEEecCCCC---CCCCChHHHHHHHHHHHHHHHh
Confidence            34566777776654   2 57999973      455654444   3345554211   111112    2333333322  


Q ss_pred             cCCCcEEEEeCCCc-hHHH-HHHHH-HHCCcc
Q 032621           77 KEEDRLVVGCQSGA-RSLH-ATADL-LGAGFK  105 (137)
Q Consensus        77 ~~~~~iv~~c~~g~-ra~~-~~~~l-~~~G~~  105 (137)
                      +.+..|+++|..|. |+.. ++.+| ...|+.
T Consensus       113 ~~~~~V~VHC~~G~~Rsg~~i~ayL~~~~~~s  144 (194)
T d1i9sa_         113 SPPELIGVHCTHGFNRTGFLICAFLVEKMDWS  144 (194)
T ss_dssp             --CCEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCeEEEECCCCCCccHHHHHHHHHHHcCCC
Confidence            34567999999987 6653 34444 456763

>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Protein tyrosine phosphatase type IVa
species: Human (Homo sapiens), pr-1 [TaxId: 9606]

Probab=90.02  E-value=0.52  Score=28.74  Aligned_cols=88  Identities=18%  Similarity=0.250  Sum_probs=44.1

Q ss_pred             eCHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEe
Q 032621           15 VDVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC   86 (137)
Q Consensus        15 is~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c   86 (137)
                      -+.+++.+.+.+ + ..||.+...    ..+..-.|   .+.++|+....+...-....+...+...  .+.+.+|+++|
T Consensus        20 ~t~~~f~~~l~~~~i~~Iv~l~e~~y~~~~~~~~~i---~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~v~VHC   96 (152)
T d1rxda_          20 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI---HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHC   96 (152)
T ss_dssp             GGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC---EEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred             hhHHHHHHHHHHhCCeEEeecccccCCchheeecce---EEEEeeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            356777776655 4 468888753    22332222   3345555322111100001222222222  24678999999


Q ss_pred             CCCc-hHHHH-HHHHHHCCcc
Q 032621           87 QSGA-RSLHA-TADLLGAGFK  105 (137)
Q Consensus        87 ~~g~-ra~~~-~~~l~~~G~~  105 (137)
                      ..|. ||... +..|...|++
T Consensus        97 ~~G~gRsg~~~a~~l~~~~~~  117 (152)
T d1rxda_          97 VAGLGRAPVLVALALIEGGMK  117 (152)
T ss_dssp             SSSSTTHHHHHHHHHHHTTCC
T ss_pred             cCCcccHHHHHHHHHHHhCcC
Confidence            9886 65444 5556666763

>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Phosphotyrosine protein phosphatases I-like
superfamily: Phosphotyrosine protein phosphatases I
family: Low-molecular-weight phosphotyrosine protein phosphatases
domain: Arsenate reductase ArsC
species: Staphylococcus aureus [TaxId: 1280]

Probab=89.23  E-value=0.16  Score=30.56  Aligned_cols=35  Identities=11%  Similarity=-0.094  Sum_probs=27.0

Q ss_pred             CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621           80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      +.|+|+|.+.. ||..|..+|+.++-+++.+...|.
T Consensus         3 ~~vlFvC~~N~cRS~mAEa~~~~~~~~~~~v~SAG~   38 (130)
T d1jf8a_           3 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGI   38 (130)
T ss_dssp             EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred             CEEEEEeCCCcHHHHHHHHHHHhcCCccceeccccc
Confidence            46999999875 999998888887655566666664

>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pac-1 [TaxId: 9606]

Probab=88.99  E-value=0.58  Score=28.43  Aligned_cols=80  Identities=19%  Similarity=0.152  Sum_probs=41.3

Q ss_pred             HhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHH-HHH
Q 032621           23 LLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLH-ATA   97 (137)
Q Consensus        23 ~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~-~~~   97 (137)
                      +.+.+ ..||++........  .++-.+.++|+...... .+.  -.+....+.+....+.+|+++|..|. ||.. ++.
T Consensus        25 L~~~gI~~Iin~~~~~~~~~--~~~~~y~~i~i~D~~~~-~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~sRS~~v~~a  101 (145)
T d1m3ga_          25 LQACGITAVLNVSASCPNHF--EGLFRYKSIPVEDNQMV-EISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLA  101 (145)
T ss_dssp             HHHHTCSEEEECSSSSSEEE--CSSSEEEECCCCCSTTC-CCTTSHHHHHHHHHHHHHTTCCEEECCSSSSSHHHHHHHH
T ss_pred             HHHcCCcEEEEecCCCCcCC--CCceEEEEEeccCCchh-hHHHHHHHHHHHHHHhhccCceEEEEcccccccHHHHHHH
Confidence            33445 46899875422211  12224456776432111 111  12333344333567889999999987 7654 344


Q ss_pred             HHH-HCCcc
Q 032621           98 DLL-GAGFK  105 (137)
Q Consensus        98 ~l~-~~G~~  105 (137)
                      +|. ..|++
T Consensus       102 YLm~~~~~~  110 (145)
T d1m3ga_         102 YLMQSRRVR  110 (145)
T ss_dssp             HHHHTTCCH
T ss_pred             HHHHHhCCC
Confidence            444 45654

>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]

Probab=88.25  E-value=0.41  Score=28.99  Aligned_cols=79  Identities=16%  Similarity=0.115  Sum_probs=39.2

Q ss_pred             CC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHHH-HH-H
Q 032621           26 SG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHAT-AD-L   99 (137)
Q Consensus        26 ~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~-~~-l   99 (137)
                      .+ ..||++............+-.+.++|....... .+..  +...+.+......+.+|+++|..|. ||..++ .+ +
T Consensus        28 ~gI~~Iin~~~~~~~~~~~~~~~~y~~~~~~D~~~~-~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~vv~aYLm  106 (144)
T d1mkpa_          28 FGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQ-NLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLM  106 (144)
T ss_dssp             TTEEEEEECCSSCCCEEEEETTEEEEECCCCCSTTC-CSGGGHHHHHHHHHHHHHTTCEEEEECSSCSHHHHHHHHHHHH
T ss_pred             CCCcEEEEccccCCccccCCCceEEEEEEEecCCCC-CHHHHHHHHHHHHHHhhhccceEEEEecccccchHHHHHHHHH
Confidence            45 458998753211111122234456666432111 1111  1223333333567889999999987 765543 33 4


Q ss_pred             HHCCcc
Q 032621          100 LGAGFK  105 (137)
Q Consensus       100 ~~~G~~  105 (137)
                      +..|++
T Consensus       107 ~~~~~~  112 (144)
T d1mkpa_         107 QKLNLS  112 (144)
T ss_dssp             HHHTCC
T ss_pred             HHhCCC
Confidence            445653

>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Putative DEAD box RNA helicase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.81  E-value=1.1  Score=27.39  Aligned_cols=37  Identities=22%  Similarity=0.247  Sum_probs=30.8

Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      ..+...++||++-..+..++..|...|+. +..+.|+.
T Consensus        26 ~~~~k~IIF~~s~~~~~~l~~~L~~~g~~-~~~~~~~~   62 (155)
T d1hv8a2          26 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDL   62 (155)
T ss_dssp             STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             cCCCCEEEEECchHHHHHHHhhhcccccc-cccccccc
Confidence            34556899999988899999999999996 77888764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=84.94  E-value=1.3  Score=27.45  Aligned_cols=46  Identities=13%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             HHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           69 LKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        69 ~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      ...+... +++++.|+|+.. |..|..+...|.+.|+++++++.--..
T Consensus         6 ~~~l~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1           6 VKLIEKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             HHHHHHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             HHHHHHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHH
Confidence            3444444 567788888755 556666777889999988988865433

>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Initiation factor 4a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.30  E-value=1.3  Score=27.40  Aligned_cols=37  Identities=19%  Similarity=0.183  Sum_probs=31.4

Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      +..+++++|++-..+...+..|...|+. +..+.|+..
T Consensus        26 ~~~k~iIF~~s~~~~~~l~~~L~~~~~~-~~~~~~~~~   62 (162)
T d1fuka_          26 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP   62 (162)
T ss_dssp             TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred             CCCcEEEEEEEEchHHHHHHHHhhcCce-EEEeccCCc
Confidence            5567999999988999999999999996 888888654

>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Spliceosome RNA helicase BAT1 (UAP56)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.09  E-value=1  Score=27.99  Aligned_cols=38  Identities=18%  Similarity=0.174  Sum_probs=31.8

Q ss_pred             CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHH
Q 032621           78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA  116 (137)
Q Consensus        78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~  116 (137)
                      ....+|++|++-..+..++..|.+.|++ +..+.|+...
T Consensus        26 ~~~k~iIF~~~~~~~~~l~~~L~~~~~~-~~~ihg~~~~   63 (168)
T d1t5ia_          26 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMPQ   63 (168)
T ss_dssp             CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSCH
T ss_pred             CCCeEEEEEeeeecchhhhhhhcccccc-ccccccccch
Confidence            4557899999888889999999999996 8889998643

>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: RecQ helicase domain
species: Escherichia coli [TaxId: 562]

Probab=82.80  E-value=1.4  Score=28.28  Aligned_cols=38  Identities=18%  Similarity=0.313  Sum_probs=32.7

Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      .++..++|||++-..+..++..|...|+. +..+.|+..
T Consensus        28 ~~~~~~IIF~~t~~~~~~l~~~l~~~~~~-~~~~h~~~~   65 (200)
T d1oywa3          28 QRGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE   65 (200)
T ss_dssp             TTTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred             cCCCCEEEEEeeehhhHHhhhhhccCCce-eEEecCCCc
Confidence            35667999999988999999999999996 888888864

>d1y1la_ c.44.1.1 (A:) Arsenate reductase ArsC {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Phosphotyrosine protein phosphatases I-like
superfamily: Phosphotyrosine protein phosphatases I
family: Low-molecular-weight phosphotyrosine protein phosphatases
domain: Arsenate reductase ArsC
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.70  E-value=0.64  Score=27.53  Aligned_cols=33  Identities=18%  Similarity=0.166  Sum_probs=24.5

Q ss_pred             cEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621           81 RLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH  114 (137)
Q Consensus        81 ~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~  114 (137)
                      +|+|+|.+.. ||..|..+|+.++- ++.+...|.
T Consensus         1 kVlFvC~gN~~RS~mAea~~~~~~~-~~~v~SAG~   34 (124)
T d1y1la_           1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGV   34 (124)
T ss_dssp             CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEES
T ss_pred             CEEEEcCCCchHHHHHHHHHHHhcc-cceeeeecc
Confidence            4899999765 99999999998774 355555443

>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Putative ATP-dependent RNA helicase DHH1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.68  E-value=1  Score=28.03  Aligned_cols=38  Identities=11%  Similarity=0.120  Sum_probs=31.9

Q ss_pred             cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621           77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM  115 (137)
Q Consensus        77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~  115 (137)
                      .+...++++|++-..+..++..|...|+. +..+.|+..
T Consensus        30 ~~~~k~iVF~~~~~~~~~l~~~L~~~g~~-~~~~h~~~~   67 (171)
T d1s2ma2          30 LQINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK   67 (171)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred             CCCCceEEEEeeeehhhHhHHhhhccccc-ccccccccc
Confidence            35567999999988899999999999997 778888764

>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=81.71  E-value=1.1  Score=26.96  Aligned_cols=33  Identities=15%  Similarity=0.143  Sum_probs=27.6

Q ss_pred             CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec
Q 032621           78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF  110 (137)
Q Consensus        78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l  110 (137)
                      +++.++++++   +|..-..+++.|++.|..+|+.+
T Consensus        49 ~gk~viIvDDii~TGgTl~~aa~~Lk~~GA~~V~~~   84 (129)
T d1u9ya2          49 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAA   84 (129)
T ss_dssp             TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             cceEEEEEcchhcccccHHHHHHHHHhcCCcceEEE
Confidence            6778888876   78899999999999999888744

>d1vkra_ c.44.2.1 (A:) PTS system mannitol-specific EIICBA component {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphotyrosine protein phosphatases I-like
superfamily: PTS system IIB component-like
family: PTS system, Lactose/Cellobiose specific IIB subunit
domain: PTS system mannitol-specific EIICBA component
species: Escherichia coli [TaxId: 562]

Probab=81.62  E-value=0.82  Score=26.04  Aligned_cols=30  Identities=23%  Similarity=0.526  Sum_probs=20.6

Q ss_pred             CcEEEEeCCCchHH-HHH----HHHHHCCccceee
Q 032621           80 DRLVVGCQSGARSL-HAT----ADLLGAGFKHVSN  109 (137)
Q Consensus        80 ~~iv~~c~~g~ra~-~~~----~~l~~~G~~~v~~  109 (137)
                      ++|+++|.+|.-++ .++    ..|++.|++.+.+
T Consensus         4 kkIl~vCg~G~GSS~m~~~~l~~~lk~~gi~~i~v   38 (97)
T d1vkra_           4 RKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISV   38 (97)
T ss_dssp             CEEEECCSSSSHHHHHHHHHHHHHHHHTTCTTSEE
T ss_pred             cEEEEECCCCcCHHHHHHHHHHHHHHHcCCCceEE
Confidence            67999999998543 333    4567789865443

>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: Tryptophan biosynthesis enzymes
domain: Indole-3-glycerophosphate synthase, IPGS
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=81.39  E-value=3.3  Score=27.66  Aligned_cols=89  Identities=16%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             eCHHHHHHHhhC----C-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621           15 VDVRAAKNLLES----G-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG   89 (137)
Q Consensus        15 is~~~~~~~~~~----~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g   89 (137)
                      ++.+++.++++.    + -++|.|.+.+|.....--|+..+-|-.- ...+..++ .+-...+...++.+  +++++-+|
T Consensus       136 L~~~~l~~l~~~a~~lgl~~LvEvh~~~El~~a~~~~a~iIGINnR-nL~t~~vd-~~~~~~L~~~ip~~--~~~IaESG  211 (247)
T d1a53a_         136 LTERELESLLEYARSYGMEPLIEINDENDLDIALRIGARFIGINSR-DLETLEIN-KENQRKLISMIPSN--VVKVAESG  211 (247)
T ss_dssp             SCHHHHHHHHHHHHTTTCCCEEEECSHHHHHHHHHTTCSEEEEESB-CTTTCCBC-HHHHHHHHHHSCTT--SEEEEESC
T ss_pred             ccHHHHHHHHHHHHHHhhhHHhhcCCHHHHHHHHhCCCCeEeeecc-Chhhhhhh-hhHHHHHHhhCCCC--CeEEEecC
Confidence            345555555532    4 5799999999887533334422322111 01111222 23333444444443  46678889


Q ss_pred             chHHHHHHHHHHCCccce
Q 032621           90 ARSLHATADLLGAGFKHV  107 (137)
Q Consensus        90 ~ra~~~~~~l~~~G~~~v  107 (137)
                      ..+..-...+.+.|++.+
T Consensus       212 I~t~~dv~~l~~~G~dav  229 (247)
T d1a53a_         212 ISERNEIEELRKLGVNAF  229 (247)
T ss_dssp             CCCHHHHHHHHHTTCCEE
T ss_pred             CCCHHHHHHHHHCCCCEE
Confidence            988888889999999844

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=81.24  E-value=1.3  Score=25.83  Aligned_cols=37  Identities=16%  Similarity=0.171  Sum_probs=21.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621           80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW  117 (137)
Q Consensus        80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w  117 (137)
                      ++|+++.+...........|...||+ |.....|-.++
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~-v~~a~~~~~al   39 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYD-VITASDGEEAL   39 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCE-EEEESSHHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCE-EEEECCHHHHH
Confidence            34666655555555566666666664 55555555544