Citrus Sinensis ID: 032804

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MANALIACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVLPEK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MANALIACSlsipirassgsgyqepesnrikppssssssssssstnwwaplfgwssdpgylnnnnrkknqlemagtdnnsgrpgsrfspgcftEEKAKQLRKKTAESSSFHDVMYHSALASRLasdmsvlpek
Flexible Loop (DISEMBL)
MANALIACslsipirassgsgyqepesnrikppsssssssssssTNWWAPLFGWSSDPGYLNNNNRKKNQLEmagtdnnsgrpgsRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALAsrlasdmsvlpek
Low Complexity Region (SEG)
MANALIACSLSIPIRASSGSGYQEPESNRIKPPsssssssssssTNWWAPLFGWSSDPGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVLPEK
Disordered region (IsUnstruct)
*****IAC*************************************NWWAPLFGWSS*****************************************************************************
Disordered Region (DISOPRED)
*********************************************NWWAPLFGWSSDPGY************************************A***RK**AESSSFHDVMYHSALASR***********
Disordered Region (DISEMBL)
MANALIACSLSIPIRAS****************************NWWAPLFGWSSDPGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFT***************SFHDVMYHSALASR***********
Disordered Region (DISPRO)
*ANALIACSLSIP*********************************WWA**FGWSSDPGYLN***************************GCFT*E**KQLRKKTAESSSFHDVMYHSALASRLASD*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MANALIACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVLPEK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
255553047	126	conserved hypothetical protein [Ricinus	0.887	0.936	0.576	4e-30
224054146	131	predicted protein [Populus trichocarpa]	0.917	0.931	0.5	1e-26
224070847	131	predicted protein [Populus trichocarpa]	0.917	0.931	0.5	7e-26
225442809	119	PREDICTED: uncharacterized protein LOC10	0.804	0.899	0.504	3e-25
147768005	119	hypothetical protein VITISV_030821 [Viti	0.864	0.966	0.480	6e-25
18404156	117	uncharacterized protein [Arabidopsis tha	0.789	0.897	0.507	1e-24
297847660	121	hypothetical protein ARALYDRAFT_892289 [	0.781	0.859	0.511	3e-24
356526179	120	PREDICTED: uncharacterized protein LOC10	0.812	0.9	0.533	9e-24
356519399	122	PREDICTED: uncharacterized protein LOC10	0.857	0.934	0.511	1e-23
255640540	120	unknown [Glycine max]	0.812	0.9	0.516	5e-22

>gi|255553047|ref|XP_002517566.1| conserved hypothetical protein [Ricinus communis] gi|223543198|gb|EEF44730.1| conserved hypothetical protein [Ricinus communis]

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 12/130 (9%)

Query: 1   MANALIA-CSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPG 59
           MA+ L+  CSL+ PIRASS S  ++P+ N  K         ++SST WWAPLFGWSSDP 
Sbjct: 1   MASTLVFNCSLAAPIRASSRSA-RKPDPNSRK---------TASSTTWWAPLFGWSSDPD 50

Query: 60  YLNNNNRKKN-QLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSA 118
           Y+N  +   N Q E++ +++ S    S+FS GCFTEEKA+QLRKKTAESSSFHD+MYHSA
Sbjct: 51  YINTGSDTVNKQAEISESESGSDGARSKFSLGCFTEEKARQLRKKTAESSSFHDIMYHSA 110

Query: 119 LASRLASDMS 128
           +ASRLASD+S
Sbjct: 111 IASRLASDIS 120

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054146|ref|XP_002298114.1| predicted protein [Populus trichocarpa] gi|222845372|gb|EEE82919.1| predicted protein [Populus trichocarpa]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 87/142 (61%), Gaps = 20/142 (14%)

Query: 1   MANAL-IACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPG 59
           MA+ L  ACS+  P+RASSGS           P +       S S+ WW+PLFGWSS P 
Sbjct: 1   MASVLTFACSVPAPVRASSGS-----------PRTPDPYGKKSGSSTWWSPLFGWSSSPD 49

Query: 60  YLNNN--------NRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFH 111
           YLN N        +    +  ++G+D   GRP SRF+ G FTEEKAKQLR+KT E S+FH
Sbjct: 50  YLNGNSIAGGTGDDVPDKESGLSGSDQEPGRPRSRFALGSFTEEKAKQLRRKTLEGSTFH 109

Query: 112 DVMYHSALASRLASDMSVLPEK 133
           D+MYHSA+ASRLASD S   EK
Sbjct: 110 DMMYHSAIASRLASDGSGRQEK 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070847|ref|XP_002303262.1| predicted protein [Populus trichocarpa] gi|222840694|gb|EEE78241.1| predicted protein [Populus trichocarpa]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 90/142 (63%), Gaps = 20/142 (14%)

Query: 1   MANAL-IACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPG 59
           MA+ L  ACSL  P+RASSGS       +R   P    S SS+    WWAPLFGWSS P 
Sbjct: 1   MASTLAFACSLPAPVRASSGS-------SRKPDPCGKKSGSST----WWAPLFGWSSSPD 49

Query: 60  YLNN--------NNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFH 111
           Y+N+        ++    +  ++G+D   GRP SRF+ G FTEEKA++LR+KT E  +FH
Sbjct: 50  YINSGSAGGSTSDDIPYKESGVSGSDQEPGRPRSRFALGSFTEEKARRLRRKTVEGITFH 109

Query: 112 DVMYHSALASRLASDMSVLPEK 133
           D+MYHSA+ASRLASD S  PEK
Sbjct: 110 DMMYHSAIASRLASDGSGQPEK 131

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442809|ref|XP_002285278.1| PREDICTED: uncharacterized protein LOC100244679 [Vitis vinifera]

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 10/117 (8%)

Query: 14  IRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNNNRKKNQLEM 73
           IRAS+ SG ++ + NR +          +S   WW+P+FGWSSDP Y+   + +K+   +
Sbjct: 13  IRASAVSGPRKLDQNRRR----------ASQPTWWSPIFGWSSDPDYIVGESAEKSAGAL 62

Query: 74  AGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVL 130
            G D+ + R  SRF+ GCFTEEKAKQLR+KT ES+SFHD+MYHS++ASRLASD+  L
Sbjct: 63  EGKDSETARSRSRFTLGCFTEEKAKQLRRKTMESASFHDIMYHSSIASRLASDVPEL 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768005|emb|CAN71657.1| hypothetical protein VITISV_030821 [Vitis vinifera]

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 86/129 (66%), Gaps = 14/129 (10%)

Query: 6   IACSLSI----PIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYL 61
           +A +LS+     IRAS+ SG ++ + NR +          +S   WW+P+FGWSSDP Y+
Sbjct: 1   MASTLSVFNPTGIRASAVSGPRKLDQNRRR----------ASQPTWWSPIFGWSSDPDYI 50

Query: 62  NNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALAS 121
              + +K+     G D+ + R  SRF+ GCFTEEKAKQLR+KT ES+SFHD+MYHS++AS
Sbjct: 51  VGESAEKSAGAQEGKDSETARSRSRFTLGCFTEEKAKQLRRKTMESASFHDIMYHSSIAS 110

Query: 122 RLASDMSVL 130
           RLASD+  L
Sbjct: 111 RLASDVPEL 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404156|ref|NP_564614.1| uncharacterized protein [Arabidopsis thaliana] gi|5903034|gb|AAD55593.1|AC008016_3 F6D8.3 [Arabidopsis thaliana] gi|21554100|gb|AAM63180.1| unknown [Arabidopsis thaliana] gi|28466819|gb|AAO44018.1| At1g52720 [Arabidopsis thaliana] gi|110736534|dbj|BAF00234.1| hypothetical protein [Arabidopsis thaliana] gi|332194723|gb|AEE32844.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 81/128 (63%), Gaps = 23/128 (17%)

Query: 5   LIACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLN-- 62
           +I CS    IRASSGSG   P+ NR K            S  WWAPLFG  SDP YLN  
Sbjct: 4   IITCSALPTIRASSGSGSLNPDQNRKK------------SAAWWAPLFGLPSDPDYLNIE 51

Query: 63  --NNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALA 120
              +    ++ +++G+       G +F  GCFTEEKAKQLR+KTAE+S+FHDVMYHSA+A
Sbjct: 52  SSCSTVNPDKTDISGS-------GQKFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIA 104

Query: 121 SRLASDMS 128
           SRLASD++
Sbjct: 105 SRLASDIT 112

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847660|ref|XP_002891711.1| hypothetical protein ARALYDRAFT_892289 [Arabidopsis lyrata subsp. lyrata] gi|297337553|gb|EFH67970.1| hypothetical protein ARALYDRAFT_892289 [Arabidopsis lyrata subsp. lyrata]

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 83/133 (62%), Gaps = 29/133 (21%)

Query: 5   LIACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNN 64
           +I+CS    IRASSGS    P  NR K            S +WWAPLFG  SDP YLN  
Sbjct: 4   IISCSALTTIRASSGSESLNPGPNRKK------------SASWWAPLFGLPSDPNYLN-- 49

Query: 65  NRKKNQLEMAGT----DNNSGRP-----GSRFSPGCFTEEKAKQLRKKTAESSSFHDVMY 115
                 +E +G+    ++N G+P     G +F  GC TEEKAKQLR+KTAE+S+FHDVMY
Sbjct: 50  ------IESSGSAVNPESNPGKPDISGSGQKFRRGCLTEEKAKQLRRKTAEASTFHDVMY 103

Query: 116 HSALASRLASDMS 128
           HSA+ASRLASD+S
Sbjct: 104 HSAIASRLASDIS 116

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526179|ref|XP_003531697.1| PREDICTED: uncharacterized protein LOC100778751 [Glycine max]

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 12/120 (10%)

Query: 14  IRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNNNRKKNQLEM 73
           IRAS+GS  +   SNR KP SS          NWWAPLFGW +DP Y+  + +   Q + 
Sbjct: 13  IRASAGSPGRPDPSNR-KPVSS----------NWWAPLFGWPADPDYIGPSQKTSYQSD- 60

Query: 74  AGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVLPEK 133
              +   GRP S+F+ GCFTE+KAK+LRKKT E+S+FHD+MYHSA+ASRLASD+S   EK
Sbjct: 61  PEREVGPGRPRSKFAAGCFTEKKAKELRKKTVETSTFHDIMYHSAIASRLASDVSKGYEK 120

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519399|ref|XP_003528360.1| PREDICTED: uncharacterized protein LOC100776958 [Glycine max]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 84/131 (64%), Gaps = 17/131 (12%)

Query: 1   MANALIACSLSIPIRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGY 60
           MA  L+    ++ IRAS+GS  +    NR KP SS          NWWAPLFGW +DP Y
Sbjct: 1   MATTLMFFRPTM-IRASAGSPAKPDPRNR-KPVSS----------NWWAPLFGWPADPDY 48

Query: 61  ---LNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHS 117
              L   + K +     G D   GRP S+F+ GCFTE+KAK+LRKKT E+S+FHD+MYHS
Sbjct: 49  MGPLQKASEKSDPEREVGLD--LGRPRSKFTAGCFTEKKAKELRKKTVETSTFHDIMYHS 106

Query: 118 ALASRLASDMS 128
           A+ASRLASD+S
Sbjct: 107 AIASRLASDVS 117

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640540|gb|ACU20555.1| unknown [Glycine max]

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 79/120 (65%), Gaps = 12/120 (10%)

Query: 14  IRASSGSGYQEPESNRIKPPSSSSSSSSSSSTNWWAPLFGWSSDPGYLNNNNRKKNQLEM 73
           IRAS+GS  +   SNR KP SS          NWWAP FGW +DP Y+  + +   Q + 
Sbjct: 13  IRASAGSPGRPDPSNR-KPVSS----------NWWAPPFGWPADPDYIGPSQKTSYQSDP 61

Query: 74  AGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLASDMSVLPEK 133
              +   GRP S+F+ GCFT +KAK+LRKKT E+S+FHD+MYHSA+ASRLASD+S   EK
Sbjct: 62  E-REVGPGRPRSKFAAGCFTGKKAKELRKKTVETSTFHDIMYHSAIASRLASDVSKGYEK 120

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
TAIR|locus:2035074	117	AT1G52720 "AT1G52720" [Arabido	0.819	0.931	0.540	9.7e-25
TAIR|locus:2093247	107	AT3G15630 "AT3G15630" [Arabido	0.563	0.700	0.571	1.1e-18

TAIR|locus:2035074 AT1G52720 "AT1G52720" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 67/124 (54%), Positives = 79/124 (63%)

Query:     5 LIACSLSIPIRASSGSGYQEPESNRIKPPXXXXXXXXXXXTNWWAPLFGWSSDPGYLNNN 64
             +I CS    IRASSGSG   P+ NR K               WWAPLFG  SDP YLN  
Sbjct:     4 IITCSALPTIRASSGSGSLNPDQNRKKSAA------------WWAPLFGLPSDPDYLNIE 51

Query:    65 NRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTAESSSFHDVMYHSALASRLA 124
             +   + +    TD  SG  G +F  GCFTEEKAKQLR+KTAE+S+FHDVMYHSA+ASRLA
Sbjct:    52 S-SCSTVNPDKTDI-SGS-GQKFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLA 108

Query:   125 SDMS 128
             SD++
Sbjct:   109 SDIT 112

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2093247 AT3G15630 "AT3G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 48/84 (57%), Positives = 60/84 (71%)

Query:    46 NWWAPLFGWSSDPGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTA 105
             +WWAPLFG SS+P Y+N     ++ L+ A  +  S R        C TEEKAKQLR+KTA
Sbjct:    31 SWWAPLFGMSSEPDYVNKTVNLESDLDKA--EKRSLRC-------CLTEEKAKQLRRKTA 81

Query:   106 ESSSFHDVMYHSALASRLASDMSV 129
             E+S+FHDVMYHSA+ASRLASD+ V
Sbjct:    82 EASTFHDVMYHSAIASRLASDVRV 105

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034544001 SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (1773 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
PF13991	73	BssS: BssS protein family	85.22

>PF13991 BssS: BssS protein family

Probab=85.22  E-value=1.1  Score=31.76  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=29.9

Q ss_pred             cccCCCCC-----------CCccCCCccccchhccccCCCCCCCCCCCCCCCcccHHHHHHHHHHhh
Q 032804           50 PLFGWSSD-----------PGYLNNNNRKKNQLEMAGTDNNSGRPGSRFSPGCFTEEKAKQLRKKTA  105 (133)
Q Consensus        50 PLFGWSs~-----------pDYIda~~~~~~~~~~~~~e~~~~~~rsrf~~G~lTEEKAkqLR~~~~  105 (133)
                      |+.||-=.           -+|++.......           .+-..||.  +||.|-||||...+-
T Consensus         2 Pv~GW~i~pv~~~dal~lrl~yls~~~q~~e-----------~a~~~~~~--~lT~e~Ar~Li~~L~   55 (73)
T PF13991_consen    2 PVTGWDIGPVDSYDALMLRLHYLSSPDQPPE-----------EAQVGRTY--WLTTEMARQLISILE   55 (73)
T ss_pred             CcccceeccccccceeEEEecccCCCCCCcc-----------ccccCcee--EecHHHHHHHHHHHH
Confidence            78888544           388887754421           11246777  799999999988764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00