Citrus Sinensis ID: 032825


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
MTDKDGKLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
cccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccc
cccccccccccEEcEcccccccccEcccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHccc
mtdkdgklhryeyrwadgvqikkpievsaPKYVEYLMDWIESqlddesifpqklgapfpsnFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCefglidkkelgplqelidsiivpy
mtdkdgklhryeyrwadgvqikkpieVSAPKYVEYLMDWIESQLDDESIFPQklgapfpsnFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKelgplqelidsiivpy
MTDKDGKLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
*******LHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIV**
*******LHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
MTDKDGKLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
*****GKLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTDKDGKLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query133 2.2.26 [Sep-21-2011]
Q8GYX0215 MOB kinase activator-like no no 0.932 0.576 0.919 2e-62
Q54XJ0213 MOB kinase activator-like yes no 0.909 0.568 0.727 5e-50
Q3T1J9216 MOB kinase activator 1A O yes no 0.902 0.555 0.675 8e-47
Q5RAE0216 MOB kinase activator 1A O yes no 0.902 0.555 0.675 8e-47
Q921Y0216 MOB kinase activator 1A O yes no 0.902 0.555 0.675 8e-47
Q9H8S9216 MOB kinase activator 1A O yes no 0.902 0.555 0.675 8e-47
Q8BPB0216 MOB kinase activator 1B O yes no 0.902 0.555 0.666 3e-46
Q7L9L4216 MOB kinase activator 1B O yes no 0.902 0.555 0.666 3e-46
Q95RA8219 MOB kinase activator-like yes no 0.917 0.557 0.647 5e-46
Q54CR8216 MOB kinase activator-like no no 0.902 0.555 0.666 7e-45
>sp|Q8GYX0|MOB1_ARATH MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1 Back     alignment and function desciption
 Score =  236 bits (603), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/124 (91%), Positives = 118/124 (95%)

Query: 10  RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69
           +YEYRWADGVQIKKPIEVSAPKYVEYLMDWIE+QLDDE+IFPQKLGA FP NFKEVVKTI
Sbjct: 92  KYEYRWADGVQIKKPIEVSAPKYVEYLMDWIETQLDDETIFPQKLGAAFPPNFKEVVKTI 151

Query: 70  FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSI 129
           FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFT EF LIDKKEL PLQELI+SI
Sbjct: 152 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTHEFVLIDKKELAPLQELIESI 211

Query: 130 IVPY 133
           I PY
Sbjct: 212 IAPY 215





Arabidopsis thaliana (taxid: 3702)
>sp|Q54XJ0|MOB1A_DICDI MOB kinase activator-like 1 homolog A OS=Dictyostelium discoideum GN=mobA PE=3 SV=1 Back     alignment and function description
>sp|Q3T1J9|MOB1A_RAT MOB kinase activator 1A OS=Rattus norvegicus GN=Mob1a PE=1 SV=3 Back     alignment and function description
>sp|Q5RAE0|MOB1A_PONAB MOB kinase activator 1A OS=Pongo abelii GN=MOB1A PE=2 SV=3 Back     alignment and function description
>sp|Q921Y0|MOB1A_MOUSE MOB kinase activator 1A OS=Mus musculus GN=Mob1a PE=1 SV=3 Back     alignment and function description
>sp|Q9H8S9|MOB1A_HUMAN MOB kinase activator 1A OS=Homo sapiens GN=MOB1A PE=1 SV=4 Back     alignment and function description
>sp|Q8BPB0|MOB1B_MOUSE MOB kinase activator 1B OS=Mus musculus GN=Mob1b PE=1 SV=3 Back     alignment and function description
>sp|Q7L9L4|MOB1B_HUMAN MOB kinase activator 1B OS=Homo sapiens GN=MOB1B PE=1 SV=3 Back     alignment and function description
>sp|Q95RA8|MOB1_DROME MOB kinase activator-like 1 OS=Drosophila melanogaster GN=mats PE=1 SV=1 Back     alignment and function description
>sp|Q54CR8|MOB1B_DICDI MOB kinase activator-like 1 homolog B OS=Dictyostelium discoideum GN=mobB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query133
255557655158 Maintenance of ploidy protein mob1, puta 0.954 0.803 0.944 5e-64
359476550215 PREDICTED: mps one binder kinase activat 0.932 0.576 0.935 5e-63
449453320215 PREDICTED: MOB kinase activator-like 1-l 0.932 0.576 0.943 5e-63
224139074216 predicted protein [Populus trichocarpa] 0.932 0.574 0.943 6e-63
242078295215 hypothetical protein SORBIDRAFT_07g00431 0.932 0.576 0.943 9e-63
225430580215 PREDICTED: mps one binder kinase activat 0.932 0.576 0.935 1e-62
388515915215 unknown [Lotus japonicus] 0.932 0.576 0.911 1e-62
192910878215 Mob1 [Elaeis guineensis] 0.932 0.576 0.935 2e-62
118481475129 unknown [Populus trichocarpa] gi|1184815 0.932 0.961 0.943 2e-62
413921196218 hypothetical protein ZEAMMB73_890640 [Ze 0.932 0.568 0.935 2e-62
>gi|255557655|ref|XP_002519857.1| Maintenance of ploidy protein mob1, putative [Ricinus communis] gi|223540903|gb|EEF42461.1| Maintenance of ploidy protein mob1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  248 bits (634), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 120/127 (94%), Positives = 123/127 (96%)

Query: 7   KLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVV 66
           K +RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIE+QLDDESIFPQKLGAPFP NFKEVV
Sbjct: 32  KFYRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIEAQLDDESIFPQKLGAPFPPNFKEVV 91

Query: 67  KTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELI 126
           KTIFKRLFRVYAHIY+SHFQKIVSLKEEAHLNTCFKHFILFT EFGLIDKKEL PLQELI
Sbjct: 92  KTIFKRLFRVYAHIYYSHFQKIVSLKEEAHLNTCFKHFILFTYEFGLIDKKELAPLQELI 151

Query: 127 DSIIVPY 133
           DSIIVPY
Sbjct: 152 DSIIVPY 158




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476550|ref|XP_003631858.1| PREDICTED: mps one binder kinase activator-like 1 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453320|ref|XP_004144406.1| PREDICTED: MOB kinase activator-like 1-like [Cucumis sativus] gi|449500086|ref|XP_004161000.1| PREDICTED: MOB kinase activator-like 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224139074|ref|XP_002326761.1| predicted protein [Populus trichocarpa] gi|118481630|gb|ABK92757.1| unknown [Populus trichocarpa] gi|222834083|gb|EEE72560.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|242078295|ref|XP_002443916.1| hypothetical protein SORBIDRAFT_07g004310 [Sorghum bicolor] gi|241940266|gb|EES13411.1| hypothetical protein SORBIDRAFT_07g004310 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|225430580|ref|XP_002264225.1| PREDICTED: mps one binder kinase activator-like 1 isoform 1 [Vitis vinifera] gi|296085129|emb|CBI28624.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388515915|gb|AFK46019.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|192910878|gb|ACF06547.1| Mob1 [Elaeis guineensis] Back     alignment and taxonomy information
>gi|118481475|gb|ABK92680.1| unknown [Populus trichocarpa] gi|118481572|gb|ABK92728.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|413921196|gb|AFW61128.1| hypothetical protein ZEAMMB73_890640 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query133
TAIR|locus:2163533215 MOB1-like "MOB1-like" [Arabido 0.932 0.576 0.911 8.1e-60
TAIR|locus:5019474836215 AT4G19045 [Arabidopsis thalian 0.932 0.576 0.919 5.7e-59
DICTYBASE|DDB_G0278907213 mobA "Mps1 binder-like protein 0.909 0.568 0.727 2e-47
ZFIN|ZDB-GENE-040426-919216 mob1ba "MOB kinase activator 1 0.902 0.555 0.675 2.7e-45
UNIPROTKB|Q0VCJ5216 MOBKL1B "Uncharacterized prote 0.902 0.555 0.675 7.1e-45
UNIPROTKB|E2RTL5216 MOB1A "Uncharacterized protein 0.902 0.555 0.675 7.1e-45
UNIPROTKB|Q9H8S9216 MOB1A "MOB kinase activator 1A 0.902 0.555 0.675 7.1e-45
MGI|MGI:2442631216 Mob1a "MOB kinase activator 1A 0.902 0.555 0.675 7.1e-45
RGD|1307014216 Mob1a "MOB kinase activator 1A 0.902 0.555 0.675 7.1e-45
UNIPROTKB|F1NW83227 LOC429657 "Uncharacterized pro 0.902 0.528 0.666 1.2e-44
TAIR|locus:2163533 MOB1-like "MOB1-like" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 113/124 (91%), Positives = 120/124 (96%)

Query:    10 RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69
             +YEYRWADGVQIKKPIEVSAPKYVEYLMDWIE+QLDDE++FPQ+LGAPFP NFK+VVKTI
Sbjct:    92 KYEYRWADGVQIKKPIEVSAPKYVEYLMDWIETQLDDETLFPQRLGAPFPQNFKDVVKTI 151

Query:    70 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSI 129
             FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFT EFGLIDKKEL PLQELI+SI
Sbjct:   152 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTHEFGLIDKKELAPLQELIESI 211

Query:   130 IVPY 133
             I PY
Sbjct:   212 ISPY 215




GO:0009507 "chloroplast" evidence=ISM
GO:0005634 "nucleus" evidence=IDA
GO:0009553 "embryo sac development" evidence=IMP
GO:0009554 "megasporogenesis" evidence=IMP
GO:0009556 "microsporogenesis" evidence=IMP
GO:0000902 "cell morphogenesis" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
TAIR|locus:5019474836 AT4G19045 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0278907 mobA "Mps1 binder-like protein MobA" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-919 mob1ba "MOB kinase activator 1Ba" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCJ5 MOBKL1B "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RTL5 MOB1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H8S9 MOB1A "MOB kinase activator 1A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2442631 Mob1a "MOB kinase activator 1A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307014 Mob1a "MOB kinase activator 1A" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NW83 LOC429657 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54XJ0MOB1A_DICDINo assigned EC number0.72720.90970.5680yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00026656001
SubName- Full=Chromosome chr4 scaffold_39, whole genome shotgun sequence; (227 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
pfam03637171 pfam03637, Mob1_phocein, Mob1/phocein family 4e-55
>gnl|CDD|202711 pfam03637, Mob1_phocein, Mob1/phocein family Back     alignment and domain information
 Score =  169 bits (431), Expect = 4e-55
 Identities = 67/114 (58%), Positives = 87/114 (76%), Gaps = 2/114 (1%)

Query: 10  RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69
           +YEY WAD  +  KP  + AP+Y+++L+DWIE+QL+DE IFP K+G PFP NFK +VK I
Sbjct: 60  QYEYLWAD--EKGKPTRLPAPQYIDHLLDWIETQLNDEKIFPTKVGVPFPKNFKLIVKKI 117

Query: 70  FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQ 123
            +RLFR++AHIY  HF +IV L+ E HLNT FKHF+ F  EF LID+KEL PL+
Sbjct: 118 LRRLFRIFAHIYFHHFDEIVELELETHLNTRFKHFVSFVREFNLIDRKELEPLK 171


Mob1 is an essential Saccharomyces cerevisiae protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation. Mob1 contains no known structural motifs; however MOB1 is a member of a conserved gene family and shares sequence similarity with a nonessential yeast gene, MOB2. Mob1 is a phosphoprotein in vivo and a substrate for the Mps1p kinase in vitro. Conditional alleles of MOB1 cause a late nuclear division arrest at restrictive temperature. This family also includes phocein, a rat protein that by yeast two hybrid interacts with striatin. Length = 171

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 133
KOG0440243 consensus Cell cycle-associated protein Mob1-1 [Ce 100.0
PF03637175 Mob1_phocein: Mob1/phocein family; InterPro: IPR00 100.0
KOG1903217 consensus Cell cycle-associated protein [Cell cycl 100.0
KOG1852223 consensus Cell cycle-associated protein [Cell cycl 99.89
>KOG0440 consensus Cell cycle-associated protein Mob1-1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
Probab=100.00  E-value=7e-62  Score=386.05  Aligned_cols=130  Identities=61%  Similarity=1.050  Sum_probs=126.5

Q ss_pred             CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825            2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI   80 (133)
Q Consensus         2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi   80 (133)
                      |||.|+|| +++|+|+|+.  +||++||||||||++|+|||++++||+|||||+|.|||+||.+.||+|+||||||||||
T Consensus       112 sCp~Msag~~yeY~W~D~~--~kp~~~sApqYId~lmtw~q~~~dde~iFPtK~g~~FP~nF~~~vk~Ilr~lFrvyAHi  189 (243)
T KOG0440|consen  112 SCPHMSAGPNYEYLWADEK--GKPVRVSAPQYIDYLMTWCQNQLDDENIFPTKYGNPFPGNFESVVKKILRRLFRVYAHI  189 (243)
T ss_pred             cCccccCCCcceeeeeccc--CCccccCchHHHHHHHHHHHHhccccccCccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            89999999 9999999965  68999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhcccC
Q 032825           81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY  133 (133)
Q Consensus        81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~~  133 (133)
                      |++||+.|.+|++++||||+||||+.|++||+|||+||++||++||+.|...+
T Consensus       190 Y~~Hf~~i~~L~l~ahlNt~F~Hf~~f~~eF~LiD~kE~aPl~~Li~~l~~~d  242 (243)
T KOG0440|consen  190 YHSHFDEIVALQLEAHLNTSFKHFILFAREFQLLDKKETAPLLELIESLLSQD  242 (243)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCHHhhhhHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999987653



>PF03637 Mob1_phocein: Mob1/phocein family; InterPro: IPR005301 Mob1 is an essential Saccharomyces cerevisiae (Baker's yeast) protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation Back     alignment and domain information
>KOG1903 consensus Cell cycle-associated protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1852 consensus Cell cycle-associated protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
1r3b_A202 Solution Structure Of Xenopus Laevis Mob1 Length = 7e-48
1pi1_A185 Crystal Structure Of A Human Mob1 Protein; Toward U 7e-48
2hjn_A236 Structural And Functional Analysis Of Saccharomyces 2e-27
>pdb|1R3B|A Chain A, Solution Structure Of Xenopus Laevis Mob1 Length = 202 Back     alignment and structure

Iteration: 1

Score = 185 bits (469), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 81/120 (67%), Positives = 96/120 (80%) Query: 10 RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69 RYEY WADG IKKPI+ SAPKY++YLM W++ QLDDE++FP K+G PFP NF V KTI Sbjct: 78 RYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTI 137 Query: 70 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSI 129 KRLFRVYAHIYH HF ++ L+EEAHLNT FKHFI F EF LID++EL PLQELI+ + Sbjct: 138 LKRLFRVYAHIYHQHFDAVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKL 197
>pdb|1PI1|A Chain A, Crystal Structure Of A Human Mob1 Protein; Toward Understanding Mob-Regulated Cell Cycle Pathways Length = 185 Back     alignment and structure
>pdb|2HJN|A Chain A, Structural And Functional Analysis Of Saccharomyces Cerevisiae Mob1 Length = 236 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
1pi1_A185 MOB1A; mitotic EXIT network, mitosis, DBF2, cell c 5e-56
2hjn_A236 MPS1 binder 1, maintenance of ploidy protein MOB1; 1e-49
>1pi1_A MOB1A; mitotic EXIT network, mitosis, DBF2, cell cycle; 2.00A {Homo sapiens} SCOP: a.29.7.1 PDB: 1r3b_A Length = 185 Back     alignment and structure
 Score =  171 bits (435), Expect = 5e-56
 Identities = 81/122 (66%), Positives = 96/122 (78%)

Query: 9   HRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKT 68
            RYEY WADG  IKKPI+ SAPKY++YLM W++ QLDDE++FP K+G PFP NF  V KT
Sbjct: 60  PRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKT 119

Query: 69  IFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDS 128
           I KRLFRVYAHIYH HF  ++ L+EEAHLNT FKHFI F  EF LID++EL PLQELI+ 
Sbjct: 120 ILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK 179

Query: 129 II 130
           + 
Sbjct: 180 LG 181


>2hjn_A MPS1 binder 1, maintenance of ploidy protein MOB1; homodimer, cell cycle; 2.00A {Saccharomyces cerevisiae} Length = 236 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query133
1pi1_A185 MOB1A; mitotic EXIT network, mitosis, DBF2, cell c 100.0
2hjn_A236 MPS1 binder 1, maintenance of ploidy protein MOB1; 100.0
>1pi1_A MOB1A; mitotic EXIT network, mitosis, DBF2, cell cycle; 2.00A {Homo sapiens} SCOP: a.29.7.1 PDB: 1r3b_A Back     alignment and structure
Probab=100.00  E-value=2.1e-64  Score=390.90  Aligned_cols=131  Identities=62%  Similarity=1.109  Sum_probs=128.7

Q ss_pred             CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825            2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI   80 (133)
Q Consensus         2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi   80 (133)
                      |||+|+|| +|+|+|+|++++|||++|||||||+++|+||+++|+||++|||+.|++||++|.+.|++||||||||||||
T Consensus        52 tCP~MsAg~~~~Ylw~d~~~~kkp~~~~A~~Yi~~~m~wi~~~l~d~~iFPs~~~~~fp~~f~~~~~~I~rRLfRVyaHi  131 (185)
T 1pi1_A           52 SCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHI  131 (185)
T ss_dssp             TCSSEESSTTCEECBCCSSSCCSCBCCCHHHHHHHHHHHHHHHHTCTTTSCSSTTSCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccccCCCCeEEEEecCCCCCCCcccCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence            89999999 89999999988889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhccc
Q 032825           81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVP  132 (133)
Q Consensus        81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~  132 (133)
                      |++||+.|.++|+|+|||||||||++|++||+||++||++||++||+.|+++
T Consensus       132 Y~~Hf~~~~~l~~e~hlNt~f~hF~~F~~ef~Li~~kel~Pl~~li~~~~~~  183 (185)
T 1pi1_A          132 YHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSK  183 (185)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCSCGGGGGGGHHHHHHSSCC
T ss_pred             HHHHHHHHHHcCCcceehhhHHHHHHHHHHhCCCCHHHHHhHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999864



>2hjn_A MPS1 binder 1, maintenance of ploidy protein MOB1; homodimer, cell cycle; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 133
d1pi1a_185 a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9e-63
>d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure

class: All alpha proteins
fold: Bromodomain-like
superfamily: Mob1/phocein
family: Mob1/phocein
domain: Mob1a
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  187 bits (477), Expect = 9e-63
 Identities = 81/122 (66%), Positives = 96/122 (78%)

Query: 9   HRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKT 68
            RYEY WADG  IKKPI+ SAPKY++YLM W++ QLDDE++FP K+G PFP NF  V KT
Sbjct: 60  PRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKT 119

Query: 69  IFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDS 128
           I KRLFRVYAHIYH HF  ++ L+EEAHLNT FKHFI F  EF LID++EL PLQELI+ 
Sbjct: 120 ILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK 179

Query: 129 II 130
           + 
Sbjct: 180 LG 181


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query133
d1pi1a_185 Mob1a {Human (Homo sapiens) [TaxId: 9606]} 100.0
>d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Bromodomain-like
superfamily: Mob1/phocein
family: Mob1/phocein
domain: Mob1a
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=4.6e-65  Score=392.84  Aligned_cols=132  Identities=61%  Similarity=1.093  Sum_probs=129.6

Q ss_pred             CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825            2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI   80 (133)
Q Consensus         2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi   80 (133)
                      |||.|+|| +++|+|+|++++|||++|||||||+++|+|++++|+||++|||+.|++||++|.++|++||||||||||||
T Consensus        52 tCP~M~ag~~~~Y~w~d~~~~kkp~~~sAp~Yi~~~~~w~~~~l~de~iFPtk~g~~fP~~F~~~vk~I~rrLfRVyaHi  131 (185)
T d1pi1a_          52 SCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHI  131 (185)
T ss_dssp             TCSSEESSTTCEECBCCSSSCCSCBCCCHHHHHHHHHHHHHHHHTCTTTSCSSTTSCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccccCCcceEEEEecCCCCCCCCcCCHHHHHHHHHHHHHHhccCCccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence            89999999 99999999998889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhcccC
Q 032825           81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY  133 (133)
Q Consensus        81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~~  133 (133)
                      |++||+.|.+||+++|||||||||++||+||+||+++|++||++||+.|.+++
T Consensus       132 Y~~Hf~~~~~l~~e~hlNt~FkHF~~f~~ef~Li~~kel~pL~~li~~l~~~~  184 (185)
T d1pi1a_         132 YHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKD  184 (185)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCSCGGGGGGGHHHHHHSSCCC
T ss_pred             HHHHHHHHHHccchHHHHHHHHHHHHHHHHhCCCChHHccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999998764