Citrus Sinensis ID: 032825
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 133 | ||||||
| 255557655 | 158 | Maintenance of ploidy protein mob1, puta | 0.954 | 0.803 | 0.944 | 5e-64 | |
| 359476550 | 215 | PREDICTED: mps one binder kinase activat | 0.932 | 0.576 | 0.935 | 5e-63 | |
| 449453320 | 215 | PREDICTED: MOB kinase activator-like 1-l | 0.932 | 0.576 | 0.943 | 5e-63 | |
| 224139074 | 216 | predicted protein [Populus trichocarpa] | 0.932 | 0.574 | 0.943 | 6e-63 | |
| 242078295 | 215 | hypothetical protein SORBIDRAFT_07g00431 | 0.932 | 0.576 | 0.943 | 9e-63 | |
| 225430580 | 215 | PREDICTED: mps one binder kinase activat | 0.932 | 0.576 | 0.935 | 1e-62 | |
| 388515915 | 215 | unknown [Lotus japonicus] | 0.932 | 0.576 | 0.911 | 1e-62 | |
| 192910878 | 215 | Mob1 [Elaeis guineensis] | 0.932 | 0.576 | 0.935 | 2e-62 | |
| 118481475 | 129 | unknown [Populus trichocarpa] gi|1184815 | 0.932 | 0.961 | 0.943 | 2e-62 | |
| 413921196 | 218 | hypothetical protein ZEAMMB73_890640 [Ze | 0.932 | 0.568 | 0.935 | 2e-62 |
| >gi|255557655|ref|XP_002519857.1| Maintenance of ploidy protein mob1, putative [Ricinus communis] gi|223540903|gb|EEF42461.1| Maintenance of ploidy protein mob1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/127 (94%), Positives = 123/127 (96%)
Query: 7 KLHRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVV 66
K +RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIE+QLDDESIFPQKLGAPFP NFKEVV
Sbjct: 32 KFYRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIEAQLDDESIFPQKLGAPFPPNFKEVV 91
Query: 67 KTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELI 126
KTIFKRLFRVYAHIY+SHFQKIVSLKEEAHLNTCFKHFILFT EFGLIDKKEL PLQELI
Sbjct: 92 KTIFKRLFRVYAHIYYSHFQKIVSLKEEAHLNTCFKHFILFTYEFGLIDKKELAPLQELI 151
Query: 127 DSIIVPY 133
DSIIVPY
Sbjct: 152 DSIIVPY 158
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476550|ref|XP_003631858.1| PREDICTED: mps one binder kinase activator-like 1 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449453320|ref|XP_004144406.1| PREDICTED: MOB kinase activator-like 1-like [Cucumis sativus] gi|449500086|ref|XP_004161000.1| PREDICTED: MOB kinase activator-like 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224139074|ref|XP_002326761.1| predicted protein [Populus trichocarpa] gi|118481630|gb|ABK92757.1| unknown [Populus trichocarpa] gi|222834083|gb|EEE72560.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|242078295|ref|XP_002443916.1| hypothetical protein SORBIDRAFT_07g004310 [Sorghum bicolor] gi|241940266|gb|EES13411.1| hypothetical protein SORBIDRAFT_07g004310 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|225430580|ref|XP_002264225.1| PREDICTED: mps one binder kinase activator-like 1 isoform 1 [Vitis vinifera] gi|296085129|emb|CBI28624.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|388515915|gb|AFK46019.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|192910878|gb|ACF06547.1| Mob1 [Elaeis guineensis] | Back alignment and taxonomy information |
|---|
| >gi|118481475|gb|ABK92680.1| unknown [Populus trichocarpa] gi|118481572|gb|ABK92728.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|413921196|gb|AFW61128.1| hypothetical protein ZEAMMB73_890640 [Zea mays] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 133 | ||||||
| TAIR|locus:2163533 | 215 | MOB1-like "MOB1-like" [Arabido | 0.932 | 0.576 | 0.911 | 8.1e-60 | |
| TAIR|locus:5019474836 | 215 | AT4G19045 [Arabidopsis thalian | 0.932 | 0.576 | 0.919 | 5.7e-59 | |
| DICTYBASE|DDB_G0278907 | 213 | mobA "Mps1 binder-like protein | 0.909 | 0.568 | 0.727 | 2e-47 | |
| ZFIN|ZDB-GENE-040426-919 | 216 | mob1ba "MOB kinase activator 1 | 0.902 | 0.555 | 0.675 | 2.7e-45 | |
| UNIPROTKB|Q0VCJ5 | 216 | MOBKL1B "Uncharacterized prote | 0.902 | 0.555 | 0.675 | 7.1e-45 | |
| UNIPROTKB|E2RTL5 | 216 | MOB1A "Uncharacterized protein | 0.902 | 0.555 | 0.675 | 7.1e-45 | |
| UNIPROTKB|Q9H8S9 | 216 | MOB1A "MOB kinase activator 1A | 0.902 | 0.555 | 0.675 | 7.1e-45 | |
| MGI|MGI:2442631 | 216 | Mob1a "MOB kinase activator 1A | 0.902 | 0.555 | 0.675 | 7.1e-45 | |
| RGD|1307014 | 216 | Mob1a "MOB kinase activator 1A | 0.902 | 0.555 | 0.675 | 7.1e-45 | |
| UNIPROTKB|F1NW83 | 227 | LOC429657 "Uncharacterized pro | 0.902 | 0.528 | 0.666 | 1.2e-44 |
| TAIR|locus:2163533 MOB1-like "MOB1-like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 113/124 (91%), Positives = 120/124 (96%)
Query: 10 RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69
+YEYRWADGVQIKKPIEVSAPKYVEYLMDWIE+QLDDE++FPQ+LGAPFP NFK+VVKTI
Sbjct: 92 KYEYRWADGVQIKKPIEVSAPKYVEYLMDWIETQLDDETLFPQRLGAPFPQNFKDVVKTI 151
Query: 70 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSI 129
FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFT EFGLIDKKEL PLQELI+SI
Sbjct: 152 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTHEFGLIDKKELAPLQELIESI 211
Query: 130 IVPY 133
I PY
Sbjct: 212 ISPY 215
|
|
| TAIR|locus:5019474836 AT4G19045 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0278907 mobA "Mps1 binder-like protein MobA" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-919 mob1ba "MOB kinase activator 1Ba" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0VCJ5 MOBKL1B "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RTL5 MOB1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9H8S9 MOB1A "MOB kinase activator 1A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2442631 Mob1a "MOB kinase activator 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1307014 Mob1a "MOB kinase activator 1A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NW83 LOC429657 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00026656001 | SubName- Full=Chromosome chr4 scaffold_39, whole genome shotgun sequence; (227 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 133 | |||
| pfam03637 | 171 | pfam03637, Mob1_phocein, Mob1/phocein family | 4e-55 |
| >gnl|CDD|202711 pfam03637, Mob1_phocein, Mob1/phocein family | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 4e-55
Identities = 67/114 (58%), Positives = 87/114 (76%), Gaps = 2/114 (1%)
Query: 10 RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTI 69
+YEY WAD + KP + AP+Y+++L+DWIE+QL+DE IFP K+G PFP NFK +VK I
Sbjct: 60 QYEYLWAD--EKGKPTRLPAPQYIDHLLDWIETQLNDEKIFPTKVGVPFPKNFKLIVKKI 117
Query: 70 FKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQ 123
+RLFR++AHIY HF +IV L+ E HLNT FKHF+ F EF LID+KEL PL+
Sbjct: 118 LRRLFRIFAHIYFHHFDEIVELELETHLNTRFKHFVSFVREFNLIDRKELEPLK 171
|
Mob1 is an essential Saccharomyces cerevisiae protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation. Mob1 contains no known structural motifs; however MOB1 is a member of a conserved gene family and shares sequence similarity with a nonessential yeast gene, MOB2. Mob1 is a phosphoprotein in vivo and a substrate for the Mps1p kinase in vitro. Conditional alleles of MOB1 cause a late nuclear division arrest at restrictive temperature. This family also includes phocein, a rat protein that by yeast two hybrid interacts with striatin. Length = 171 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 133 | |||
| KOG0440 | 243 | consensus Cell cycle-associated protein Mob1-1 [Ce | 100.0 | |
| PF03637 | 175 | Mob1_phocein: Mob1/phocein family; InterPro: IPR00 | 100.0 | |
| KOG1903 | 217 | consensus Cell cycle-associated protein [Cell cycl | 100.0 | |
| KOG1852 | 223 | consensus Cell cycle-associated protein [Cell cycl | 99.89 |
| >KOG0440 consensus Cell cycle-associated protein Mob1-1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-62 Score=386.05 Aligned_cols=130 Identities=61% Similarity=1.050 Sum_probs=126.5
Q ss_pred CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825 2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI 80 (133)
Q Consensus 2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi 80 (133)
|||.|+|| +++|+|+|+. +||++||||||||++|+|||++++||+|||||+|.|||+||.+.||+|+||||||||||
T Consensus 112 sCp~Msag~~yeY~W~D~~--~kp~~~sApqYId~lmtw~q~~~dde~iFPtK~g~~FP~nF~~~vk~Ilr~lFrvyAHi 189 (243)
T KOG0440|consen 112 SCPHMSAGPNYEYLWADEK--GKPVRVSAPQYIDYLMTWCQNQLDDENIFPTKYGNPFPGNFESVVKKILRRLFRVYAHI 189 (243)
T ss_pred cCccccCCCcceeeeeccc--CCccccCchHHHHHHHHHHHHhccccccCccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 89999999 9999999965 68999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhcccC
Q 032825 81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY 133 (133)
Q Consensus 81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~~ 133 (133)
|++||+.|.+|++++||||+||||+.|++||+|||+||++||++||+.|...+
T Consensus 190 Y~~Hf~~i~~L~l~ahlNt~F~Hf~~f~~eF~LiD~kE~aPl~~Li~~l~~~d 242 (243)
T KOG0440|consen 190 YHSHFDEIVALQLEAHLNTSFKHFILFAREFQLLDKKETAPLLELIESLLSQD 242 (243)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCHHhhhhHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999987653
|
|
| >PF03637 Mob1_phocein: Mob1/phocein family; InterPro: IPR005301 Mob1 is an essential Saccharomyces cerevisiae (Baker's yeast) protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation | Back alignment and domain information |
|---|
| >KOG1903 consensus Cell cycle-associated protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1852 consensus Cell cycle-associated protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 133 | ||||
| 1r3b_A | 202 | Solution Structure Of Xenopus Laevis Mob1 Length = | 7e-48 | ||
| 1pi1_A | 185 | Crystal Structure Of A Human Mob1 Protein; Toward U | 7e-48 | ||
| 2hjn_A | 236 | Structural And Functional Analysis Of Saccharomyces | 2e-27 |
| >pdb|1R3B|A Chain A, Solution Structure Of Xenopus Laevis Mob1 Length = 202 | Back alignment and structure |
|
| >pdb|1PI1|A Chain A, Crystal Structure Of A Human Mob1 Protein; Toward Understanding Mob-Regulated Cell Cycle Pathways Length = 185 | Back alignment and structure |
| >pdb|2HJN|A Chain A, Structural And Functional Analysis Of Saccharomyces Cerevisiae Mob1 Length = 236 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 133 | |||
| 1pi1_A | 185 | MOB1A; mitotic EXIT network, mitosis, DBF2, cell c | 5e-56 | |
| 2hjn_A | 236 | MPS1 binder 1, maintenance of ploidy protein MOB1; | 1e-49 |
| >1pi1_A MOB1A; mitotic EXIT network, mitosis, DBF2, cell cycle; 2.00A {Homo sapiens} SCOP: a.29.7.1 PDB: 1r3b_A Length = 185 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 5e-56
Identities = 81/122 (66%), Positives = 96/122 (78%)
Query: 9 HRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKT 68
RYEY WADG IKKPI+ SAPKY++YLM W++ QLDDE++FP K+G PFP NF V KT
Sbjct: 60 PRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKT 119
Query: 69 IFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDS 128
I KRLFRVYAHIYH HF ++ L+EEAHLNT FKHFI F EF LID++EL PLQELI+
Sbjct: 120 ILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK 179
Query: 129 II 130
+
Sbjct: 180 LG 181
|
| >2hjn_A MPS1 binder 1, maintenance of ploidy protein MOB1; homodimer, cell cycle; 2.00A {Saccharomyces cerevisiae} Length = 236 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 133 | |||
| 1pi1_A | 185 | MOB1A; mitotic EXIT network, mitosis, DBF2, cell c | 100.0 | |
| 2hjn_A | 236 | MPS1 binder 1, maintenance of ploidy protein MOB1; | 100.0 |
| >1pi1_A MOB1A; mitotic EXIT network, mitosis, DBF2, cell cycle; 2.00A {Homo sapiens} SCOP: a.29.7.1 PDB: 1r3b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-64 Score=390.90 Aligned_cols=131 Identities=62% Similarity=1.109 Sum_probs=128.7
Q ss_pred CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825 2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI 80 (133)
Q Consensus 2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi 80 (133)
|||+|+|| +|+|+|+|++++|||++|||||||+++|+||+++|+||++|||+.|++||++|.+.|++||||||||||||
T Consensus 52 tCP~MsAg~~~~Ylw~d~~~~kkp~~~~A~~Yi~~~m~wi~~~l~d~~iFPs~~~~~fp~~f~~~~~~I~rRLfRVyaHi 131 (185)
T 1pi1_A 52 SCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHI 131 (185)
T ss_dssp TCSSEESSTTCEECBCCSSSCCSCBCCCHHHHHHHHHHHHHHHHTCTTTSCSSTTSCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCeEEEEecCCCCCCCcccCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 89999999 89999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhccc
Q 032825 81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVP 132 (133)
Q Consensus 81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~ 132 (133)
|++||+.|.++|+|+|||||||||++|++||+||++||++||++||+.|+++
T Consensus 132 Y~~Hf~~~~~l~~e~hlNt~f~hF~~F~~ef~Li~~kel~Pl~~li~~~~~~ 183 (185)
T 1pi1_A 132 YHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSK 183 (185)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCSCGGGGGGGHHHHHHSSCC
T ss_pred HHHHHHHHHHcCCcceehhhHHHHHHHHHHhCCCCHHHHHhHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999864
|
| >2hjn_A MPS1 binder 1, maintenance of ploidy protein MOB1; homodimer, cell cycle; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 133 | ||||
| d1pi1a_ | 185 | a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: | 9e-63 |
| >d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Bromodomain-like superfamily: Mob1/phocein family: Mob1/phocein domain: Mob1a species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (477), Expect = 9e-63
Identities = 81/122 (66%), Positives = 96/122 (78%)
Query: 9 HRYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKT 68
RYEY WADG IKKPI+ SAPKY++YLM W++ QLDDE++FP K+G PFP NF V KT
Sbjct: 60 PRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKT 119
Query: 69 IFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDS 128
I KRLFRVYAHIYH HF ++ L+EEAHLNT FKHFI F EF LID++EL PLQELI+
Sbjct: 120 ILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK 179
Query: 129 II 130
+
Sbjct: 180 LG 181
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 133 | |||
| d1pi1a_ | 185 | Mob1a {Human (Homo sapiens) [TaxId: 9606]} | 100.0 |
| >d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Bromodomain-like superfamily: Mob1/phocein family: Mob1/phocein domain: Mob1a species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-65 Score=392.84 Aligned_cols=132 Identities=61% Similarity=1.093 Sum_probs=129.6
Q ss_pred CCCCCCCC-CceEEeccCCCCCCCcccChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 032825 2 TDKDGKLH-RYEYRWADGVQIKKPIEVSAPKYVEYLMDWIESQLDDESIFPQKLGAPFPSNFKEVVKTIFKRLFRVYAHI 80 (133)
Q Consensus 2 tcp~M~ag-~~~YlW~d~~~~kkp~~~sA~~YI~~~m~wi~~~l~de~iFPt~~~~~fp~~F~~~v~~I~rrLfRvyaHi 80 (133)
|||.|+|| +++|+|+|++++|||++|||||||+++|+|++++|+||++|||+.|++||++|.++|++||||||||||||
T Consensus 52 tCP~M~ag~~~~Y~w~d~~~~kkp~~~sAp~Yi~~~~~w~~~~l~de~iFPtk~g~~fP~~F~~~vk~I~rrLfRVyaHi 131 (185)
T d1pi1a_ 52 SCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHI 131 (185)
T ss_dssp TCSSEESSTTCEECBCCSSSCCSCBCCCHHHHHHHHHHHHHHHHTCTTTSCSSTTSCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCcceEEEEecCCCCCCCCcCCHHHHHHHHHHHHHHhccCCccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 89999999 99999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCccccCcHHHHHHHhcccC
Q 032825 81 YHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSIIVPY 133 (133)
Q Consensus 81 Y~~H~~~~~~l~~~~hlNt~fkhF~~F~~eF~Li~~kel~pL~~li~~l~~~~ 133 (133)
|++||+.|.+||+++|||||||||++||+||+||+++|++||++||+.|.+++
T Consensus 132 Y~~Hf~~~~~l~~e~hlNt~FkHF~~f~~ef~Li~~kel~pL~~li~~l~~~~ 184 (185)
T d1pi1a_ 132 YHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKD 184 (185)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCSCGGGGGGGHHHHHHSSCCC
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHhCCCChHHccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998764
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