Citrus Sinensis ID: 032886

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccccEEEEEcHHHHcccccccccEEEEEccccccccccccccccEEEEEEccccccccccEEccHHHHHHHHcccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHcHccccccEEEEEcccccccccccccccccEEEEEcccHcccccccccEEEEEEEccccccccccccccEEEEEEEEcccccccccccccHHHHHHHHcccccEEEEEEEEc
Coil and Loop (DISEMBL)
MGIEMRIFMMISIVLCLCSAAVHAaqgnavyykppyshsacygnqdngpmvtGVSDALWrngqacgkryrvrcirganqaphpckpgnsvVVKVVDYcrqpcngilNLSQDAFneiadldagkviveynpv
Flexible Loop (DISEMBL)
MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGanqaphpckpgnSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Low Complexity Region (SEG)
MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Disordered region (IsUnstruct)
***EMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEY***
Disordered Region (DISOPRED)
***EMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Disordered Region (DISEMBL)
MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Disordered Region (DISPRO)
*GIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
Q9ZV52	130	EG45-like domain containi	yes	no	0.931	0.938	0.536	2e-30
Q9ZP41	131	EG45-like domain containi	N/A	no	0.977	0.977	0.438	4e-30
Q9M0C2	123	Putative EG45-like domain	no	no	0.900	0.959	0.393	3e-19
Q6ZGU9	291	Expansin-A5 OS=Oryza sati	no	no	0.671	0.302	0.349	9e-05
Q4PR43	267	Expansin-A23 OS=Oryza sat	no	no	0.671	0.329	0.292	0.0003
Q4PR42	278	Expansin-A24 OS=Oryza sat	no	no	0.656	0.309	0.287	0.0007
Q4PR51	262	Expansin-A14 OS=Oryza sat	no	no	0.656	0.328	0.277	0.0008

>sp|Q9ZV52|EGC2_ARATH EG45-like domain containing protein 2 OS=Arabidopsis thaliana GN=EGC2 PE=2 SV=2

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 84/125 (67%), Gaps = 3/125 (2%)

Query: 8   FMMISIVLCLCSAAV-HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           F+++ IV     A +  AAQG AVYY PPY+ SACYG Q    +V GV + LW+NG+ACG
Sbjct: 8   FVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACG 66

Query: 67  KRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIV 126
           +RYRVRCI         C  G +V VKVVD+CR+PCNG LNLS+DAF  IA+ DAG + V
Sbjct: 67  RRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRV 125

Query: 127 EYNPV 131
            Y P+
Sbjct: 126 VYTPI 130

Plays a systemic role in water and solute homeostasis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 89/130 (68%), Gaps = 2/130 (1%)

Query: 1   MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWR 60
           MG+  ++ ++ ++ +CL S+A +A++G A +Y PPY  SAC G +++G M+   S A+W 
Sbjct: 1   MGVGTKVLVITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKNDGVMIAAASYAIWN 60

Query: 61  NGQACGKRYRVRCIRGANQ-APHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL 119
           NG  C K +RV+C    NQ  PHPC+ G SV+VK+VD C   C   ++LSQ+AF++IA+ 
Sbjct: 61  NGAVCNKSFRVKCTGATNQGTPHPCR-GGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP 119

Query: 120 DAGKVIVEYN 129
           DAGK+ +E+N
Sbjct: 120 DAGKIKIEFN 129

Might have a systemic role in water and solute homeostasis. Has no expansin-like activity.

Citrus jambhiri (taxid: 64884)

>sp|Q9M0C2|EGC1_ARATH Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana GN=EGC1 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 9   MMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKR 68
           +  S VL    +  +A  G A +Y    S++ CY     G M+   SD LW NG+ CGK 
Sbjct: 6   VFFSTVLVFLFSFSYATPGIATFYT---SYTPCYRGTQEGVMIAAASDTLWDNGRVCGKM 62

Query: 69  YRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEY 128
           + V+C    N  PHPC  G SV VK+VD+C   C   L+LS++AF +IA+  AG + ++Y
Sbjct: 63  FTVKCSGPRNAVPHPCT-GKSVKVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINIDY 121

Query: 129 NP 130
            P
Sbjct: 122 FP 123

Might have a systemic role in water and solute homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZGU9|EXPA5_ORYSJ Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 45/106 (42%), Gaps = 18/106 (16%)

Query: 42  YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYC 98
           YGN   Q  G     +S AL+ NG +CG  + VRC  G     H C PG SVVV   ++C
Sbjct: 87  YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGG-GSHSCLPG-SVVVTATNFC 144

Query: 99  R-------------QPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
                          P     ++SQ  F  IA   AG V V Y  V
Sbjct: 145 PPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRV 190

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR43|EXP23_ORYSJ Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%)

Query: 42  YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYC 98
           YGN   Q  G     +S AL+ +G +CG+ Y++ C R   +AP  CKPG +V +   ++C
Sbjct: 62  YGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDR--KRAPQWCKPGVTVTITATNFC 119

Query: 99  R-------------QPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
                          P     +++Q A+ +I    AG + V Y  V
Sbjct: 120 PPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRV 165

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR42|EXP24_ORYSJ Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 44  NQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCR---- 99
           +Q  G     +S AL+ +G +CG+ Y++ C R   +AP  CKPG +V V   ++C     
Sbjct: 78  SQGYGTRNAALSTALFNDGASCGQCYKIACDR--KRAPQWCKPGVTVTVTATNFCPPNWN 135

Query: 100 ---------QPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
                     P     +++Q A+ +I    AG + V Y  V
Sbjct: 136 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRV 176

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q4PR51|EXP14_ORYSJ Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 44  NQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCR---- 99
           +Q  G     +S AL+ +G +CG+ Y++ C R   +AP  CKPG +V +   ++C     
Sbjct: 62  SQGYGTRNAALSTALFNDGASCGQCYKIACDR--KRAPQWCKPGVTVTITATNFCPPNWD 119

Query: 100 ---------QPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
                     P     +++Q A+ +I    AG + V Y  V
Sbjct: 120 LPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRV 160

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
224091853	130	predicted protein [Populus trichocarpa]	0.984	0.992	0.636	7e-41
224143882	129	predicted protein [Populus trichocarpa]	0.916	0.930	0.655	4e-39
295792206	122	gamma-expansin natriuretic peptide [Alnu	0.931	1.0	0.508	1e-28
30680435	130	EG45-like domain-containing protein 2 [A	0.931	0.938	0.536	1e-28
359472573	564	PREDICTED: omega-hydroxypalmitate O-feru	0.946	0.219	0.472	1e-28
147774924	626	hypothetical protein VITISV_043455 [Viti	0.946	0.198	0.472	3e-28
75267717	131	RecName: Full=EG45-like domain containin	0.977	0.977	0.438	3e-28
4185132	126	hypothetical protein [Arabidopsis thalia	0.923	0.960	0.540	3e-28
20338421	126	immuno-reactant natriuretic peptide-like	0.923	0.960	0.532	4e-28
297836614	129	hypothetical protein ARALYDRAFT_319814 [	0.809	0.821	0.592	1e-27

>gi|224091853|ref|XP_002309373.1| predicted protein [Populus trichocarpa] gi|222855349|gb|EEE92896.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 107/132 (81%), Gaps = 3/132 (2%)

Query: 1   MGIEMR-IFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALW 59
           MG ++  +F+M+ IV CL S A HAAQGNAV+Y PPY+ S CYGN+++G MV GVSDALW
Sbjct: 1   MGYKIESVFIMVGIVSCLISVA-HAAQGNAVFYDPPYTPSKCYGNRNDGVMVAGVSDALW 59

Query: 60  RNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL 119
             G ACG++YRV CIRGAN+AP PCK G SVVV VVDYCR+ CNG++NLS+DAF+ IAD 
Sbjct: 60  NGGAACGRKYRVSCIRGANEAPKPCKQG-SVVVTVVDYCRRGCNGVINLSKDAFSRIADP 118

Query: 120 DAGKVIVEYNPV 131
           +AGKV+++Y+ V
Sbjct: 119 NAGKVVIQYDQV 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143882|ref|XP_002325108.1| predicted protein [Populus trichocarpa] gi|222866542|gb|EEF03673.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 98/122 (80%), Gaps = 2/122 (1%)

Query: 8   FMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGK 67
            +M+ IV CL S A  AA+G AV+YKPPY+ S CYGN++NG MV GVSDALW  G ACG+
Sbjct: 9   LIMVGIVSCLLSVA-DAAEGIAVFYKPPYTPSKCYGNRNNGVMVAGVSDALWNGGAACGR 67

Query: 68  RYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVE 127
           +YRV C+RGANQAP PC+ G SVVV VVD+CR+ CNG++NLSQDAF+ IAD DAGKV+V 
Sbjct: 68  KYRVSCVRGANQAPRPCRKG-SVVVTVVDFCRKGCNGVINLSQDAFSRIADPDAGKVVVR 126

Query: 128 YN 129
           Y+
Sbjct: 127 YD 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295792206|gb|ADG29118.1| gamma-expansin natriuretic peptide [Alnus glutinosa]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 8   FMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGK 67
            M++++ +C+ S A +AAQG A +YKPPY  S+CYG Q+NG M+   SDA+W N  ACG 
Sbjct: 1   MMVVNMAICVTSVA-NAAQGTATFYKPPYVPSSCYGYQNNGSMIAAASDAIWGNRSACGT 59

Query: 68  RYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVE 127
            Y V C    N+   PC+ G SVVVK+VDYC   C G +NLSQ+AF+ IA+ DAGK+++E
Sbjct: 60  SYNVSCGGATNKGVPPCR-GTSVVVKIVDYCPAGCKGTINLSQEAFSAIANPDAGKILIE 118

Query: 128 YNPV 131
           Y  V
Sbjct: 119 YTEV 122

Source: Alnus glutinosa

Species: Alnus glutinosa

Genus: Alnus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30680435|ref|NP_849979.1| EG45-like domain-containing protein 2 [Arabidopsis thaliana] gi|20138450|sp|Q9ZV52.2|EGC2_ARATH RecName: Full=EG45-like domain containing protein 2; AltName: Full=Plant natriuretic peptide A; Short=AtEXPR3; Short=AtPNP-A; Short=Ath-ExpGamma-1.2; Flags: Precursor gi|17529070|gb|AAL38745.1| unknown protein [Arabidopsis thaliana] gi|23296798|gb|AAN13172.1| unknown protein [Arabidopsis thaliana] gi|330251696|gb|AEC06790.1| EG45-like domain-containing protein 2 [Arabidopsis thaliana]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 84/125 (67%), Gaps = 3/125 (2%)

Query: 8   FMMISIVLCLCSAAV-HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           F+++ IV     A +  AAQG AVYY PPY+ SACYG Q    +V GV + LW+NG+ACG
Sbjct: 8   FVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACG 66

Query: 67  KRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIV 126
           +RYRVRCI         C  G +V VKVVD+CR+PCNG LNLS+DAF  IA+ DAG + V
Sbjct: 67  RRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRV 125

Query: 127 EYNPV 131
            Y P+
Sbjct: 126 VYTPI 130

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472573|ref|XP_002281593.2| PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Vitis vinifera]

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 3/127 (2%)

Query: 7   IFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           +F+++++  C  S  V A  G A YY PPY  S+C G QD+G M+   SDA+W N  ACG
Sbjct: 8   LFLVMALAFCFFSKTVVADTGTATYYTPPYVPSSCNGFQDDGVMIAAASDAIWDNRGACG 67

Query: 67  KRYRVRCIRGANQA--PHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKV 124
           + Y V+C  GA  A  PHPC+   SVVVK+VDYC   C G ++LSQ+AF  IAD DAGK+
Sbjct: 68  RNYEVKC-EGATNAGDPHPCRGDQSVVVKIVDYCPPGCRGTIDLSQEAFASIADPDAGKI 126

Query: 125 IVEYNPV 131
            + +  +
Sbjct: 127 KISFQQI 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147774924|emb|CAN65920.1| hypothetical protein VITISV_043455 [Vitis vinifera]

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 3/127 (2%)

Query: 7   IFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           +F+++++  C  S  V A  G A YY PPY  S+C G QD+G M+   SDA+W N  ACG
Sbjct: 8   LFLVMALAFCFFSKTVVADTGTATYYTPPYVPSSCNGFQDDGVMIAAASDAIWDNRGACG 67

Query: 67  KRYRVRCIRGANQA--PHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKV 124
           + Y V+C  GA  A  PHPC+   SVVVK+VDYC   C G ++LSQ+AF  IAD DAGK+
Sbjct: 68  RNYEVKC-EGATNAGDPHPCRGDQSVVVKIVDYCPPGCRGTIDLSQEAFASIADQDAGKI 126

Query: 125 IVEYNPV 131
            + +  +
Sbjct: 127 KISFQQI 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75267717|sp|Q9ZP41.1|EGC_CITJA RecName: Full=EG45-like domain containing protein; AltName: Full=Blight-associated protein p12; AltName: Full=Plant natriuretic peptide; Short=PNP; Flags: Precursor gi|4102727|gb|AAD03398.1| blight-associated protein p12 precursor [Citrus jambhiri]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 89/130 (68%), Gaps = 2/130 (1%)

Query: 1   MGIEMRIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWR 60
           MG+  ++ ++ ++ +CL S+A +A++G A +Y PPY  SAC G +++G M+   S A+W 
Sbjct: 1   MGVGTKVLVITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKNDGVMIAAASYAIWN 60

Query: 61  NGQACGKRYRVRCIRGANQ-APHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL 119
           NG  C K +RV+C    NQ  PHPC+ G SV+VK+VD C   C   ++LSQ+AF++IA+ 
Sbjct: 61  NGAVCNKSFRVKCTGATNQGTPHPCR-GGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP 119

Query: 120 DAGKVIVEYN 129
           DAGK+ +E+N
Sbjct: 120 DAGKIKIEFN 129

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4185132|gb|AAD08935.1| hypothetical protein [Arabidopsis thaliana]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 3/124 (2%)

Query: 8   FMMISIVLCLCSAAV-HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           F+++ IV     A +  AAQG AVYY PPY+ SACYG Q    +V GV + LW+NG+ACG
Sbjct: 5   FVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACG 63

Query: 67  KRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIV 126
           +RYRVRCI         C  G +V VKVVD+CR+PCNG LNLS+DAF  IA+ DAG + V
Sbjct: 64  RRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRV 122

Query: 127 EYNP 130
            Y P
Sbjct: 123 VYTP 126

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|20338421|gb|AAM18791.1| immuno-reactant natriuretic peptide-like protein [Erucastrum strigosum]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 3/124 (2%)

Query: 8   FMMISIVLCLCSAAV-HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACG 66
           F+++ IV     A +  AAQG AVYY PPY+ SACYG Q    +V GV + LW+NG+ACG
Sbjct: 5   FVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACG 63

Query: 67  KRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIV 126
           +RYRVRCI         C  G +V VKVVD+CR+PCNG LNLS+DAF  +A+ DAG + V
Sbjct: 64  RRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVVANTDAGNIRV 122

Query: 127 EYNP 130
            Y P
Sbjct: 123 VYTP 126

Source: Erucastrum strigosum

Species: Erucastrum strigosum

Genus: Erucastrum

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836614|ref|XP_002886189.1| hypothetical protein ARALYDRAFT_319814 [Arabidopsis lyrata subsp. lyrata] gi|297332029|gb|EFH62448.1| hypothetical protein ARALYDRAFT_319814 [Arabidopsis lyrata subsp. lyrata]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 76/108 (70%), Gaps = 2/108 (1%)

Query: 23  HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPH 82
            AA G AVYY PPY+ SACYG Q    MV GV + LW+NG+ACG+RYRVRCI      P 
Sbjct: 24  EAALGKAVYYDPPYTRSACYGTQRE-TMVVGVKNNLWQNGRACGRRYRVRCIGATYNFPG 82

Query: 83  PCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNP 130
            C  G +V VKVVD+CR+PCNG LNLS+DAF  IA++DAG + V Y P
Sbjct: 83  ACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANIDAGNIRVVYTP 129

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
TAIR|locus:2053983	130	PNP-A "plant natriuretic pepti	0.969	0.976	0.526	2.6e-31
TAIR|locus:2118656	123	AT4G30380 "AT4G30380" [Arabido	0.900	0.959	0.393	1.2e-19
TAIR|locus:2056670	253	EXPA15 "expansin A15" [Arabido	0.694	0.359	0.333	8.4e-06
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.671	0.338	0.327	9e-06
TAIR|locus:2200625	259	EXPA10 "expansin A10" [Arabido	0.656	0.332	0.345	3.2e-05
TAIR|locus:2007106	275	EXPA1 "expansin A1" [Arabidops	0.694	0.330	0.333	4.7e-05
TAIR|locus:2087027	255	EXPA5 "expansin A5" [Arabidops	0.671	0.345	0.316	8.6e-05
TAIR|locus:2061918	253	EXPA8 "expansin A8" [Arabidops	0.908	0.470	0.293	0.00018
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.618	0.324	0.322	0.00046
TAIR|locus:2090161	252	EXPA12 "expansin 12" [Arabidop	0.839	0.436	0.269	0.00047

TAIR|locus:2053983 PNP-A "plant natriuretic peptide A" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/131 (52%), Positives = 88/131 (67%)

Query:     3 IEMRI-FMMISIVLCLCSAAV-HAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWR 60
             I+M + F+++ IV     A +  AAQG AVYY PPY+ SACYG Q    +V GV + LW+
Sbjct:     2 IKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQ 60

Query:    61 NGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLD 120
             NG+ACG+RYRVRCI         C  G +V VKVVD+CR+PCNG LNLS+DAF  IA+ D
Sbjct:    61 NGRACGRRYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTD 119

Query:   121 AGKVIVEYNPV 131
             AG + V Y P+
Sbjct:   120 AGNIRVVYTPI 130

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010230 "alternative respiration" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2118656 AT4G30380 "AT4G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 48/122 (39%), Positives = 68/122 (55%)

Query:     9 MMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKR 68
             +  S VL    +  +A  G A +Y    S++ CY     G M+   SD LW NG+ CGK 
Sbjct:     6 VFFSTVLVFLFSFSYATPGIATFYT---SYTPCYRGTQEGVMIAAASDTLWDNGRVCGKM 62

Query:    69 YRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEY 128
             + V+C    N  PHPC  G SV VK+VD+C   C   L+LS++AF +IA+  AG + ++Y
Sbjct:    63 FTVKCSGPRNAVPHPCT-GKSVKVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINIDY 121

Query:   129 NP 130
              P
Sbjct:   122 FP 123

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0071456 "cellular response to hypoxia" evidence=IEP

TAIR|locus:2056670 EXPA15 "expansin A15" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 35/105 (33%), Positives = 48/105 (45%)

Query:    40 AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRC-------IRGAN--QAPHPCKP 86
             AC YGN   Q  G     +S AL+ NG +CG  + ++C       + GA    A + C P
Sbjct:    50 ACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPP 109

Query:    87 GNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
              N++      +C  P +   +LSQ  F  IA   AG V V Y  V
Sbjct:   110 NNALPNNAGGWCNPPLHHF-DLSQPVFQRIAQYKAGVVPVSYRRV 153

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 36/110 (32%), Positives = 52/110 (47%)

Query:    40 AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGN-SVVVKV 94
             AC YGN   Q  G     +S +L+ +GQ+CG  + ++C+      P  C PGN SV V  
Sbjct:    54 ACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVND----PKWCHPGNPSVFVTA 109

Query:    95 VDYC----RQP------CN---GILNLSQDAFNEIADLDAGKVIVEYNPV 131
              ++C     QP      CN      +L+   F +IA+  AG V + Y  V
Sbjct:   110 TNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRV 159

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2200625 EXPA10 "expansin A10" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 38/110 (34%), Positives = 48/110 (43%)

Query:    40 AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVV 95
             AC YGN   Q  G     +S AL+ NG +CG  + +RC    N     C PG S+VV   
Sbjct:    56 ACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRC---ENDGKW-CLPG-SIVVTAT 110

Query:    96 DYCRQPCNGILN--------------LSQDAFNEIADLDAGKVIVEYNPV 131
             ++C  P N + N              L+Q  F  IA   AG V V Y  V
Sbjct:   111 NFC-PPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRV 159

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS;IMP

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0005199 "structural constituent of cell wall" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=TAS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2007106 EXPA1 "expansin A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 35/105 (33%), Positives = 47/105 (44%)

Query:    40 AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRC-------IRGAN--QAPHPCKP 86
             AC YGN   Q  G     +S AL+ NG +CG  + +RC       + G+    A + C P
Sbjct:    47 ACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPP 106

Query:    87 GNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
              N++      +C  P     +LSQ  F  IA   AG V V Y  V
Sbjct:   107 NNALPNNAGGWCNPPQQHF-DLSQPVFQRIAQYRAGIVPVAYRRV 150

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2087027 EXPA5 "expansin A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 32/101 (31%), Positives = 46/101 (45%)

Query:    40 AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVV 95
             AC YGN   Q  G     +S AL+  G +CG  + + C+      P  C  G S+VV   
Sbjct:    58 ACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVND----PQWCIKGRSIVVTAT 113

Query:    96 DYCR-----QPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
             ++C       P N   +LSQ  + +IA   +G + V Y  V
Sbjct:   114 NFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRV 154

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2061918 EXPA8 "expansin A8" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 44/150 (29%), Positives = 64/150 (42%)

Query:     8 FMMISIVLCLCSAAVHAAQG-----NAVYYKPPYSHS----AC-YGN---QDNGPMVTGV 54
             + +ISI+  L     H   G     +A +Y    +      AC YGN   Q  G     +
Sbjct:     9 YSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAAL 68

Query:    55 SDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCR-QP---------CNG 104
             S AL+ NG  CG  Y ++C    N  P  C  G+++ V   ++C   P         CN 
Sbjct:    69 STALFNNGLTCGACYEMKC----NDDPRWCL-GSTITVTATNFCPPNPGLSNDNGGWCNP 123

Query:   105 IL---NLSQDAFNEIADLDAGKVIVEYNPV 131
              L   +L++ AF +IA   AG V V +  V
Sbjct:   124 PLQHFDLAEPAFLQIAQYRAGIVPVSFRRV 153

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00046, P = 0.00046
 Identities = 30/93 (32%), Positives = 40/93 (43%)

Query:     7 IFMMISIVLCLCSAAVHAAQGNAVYY-KP-----PYSHSAC--YGNQDNGPMVTGVSDAL 58
             +F+ + ++L L   +       A YY  P     P  H     +G   N   V+GVS  L
Sbjct:    10 LFVQVIVLLPLLCLSDDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRL 69

Query:    59 WRNGQACGKRYRVRCIRGANQAPHPCKPGNSVV 91
             W NG  CG  Y+VRC       PH  + G  VV
Sbjct:    70 WNNGTGCGACYQVRC----KIPPHCSEEGVYVV 98

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2090161 EXPA12 "expansin 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00047, P = 0.00047
 Identities = 34/126 (26%), Positives = 60/126 (47%)

Query:     3 IEMRIFMMISIVLCLCSAAVHAA-----QGNAVYY----KPPYSHSAC-YGNQDN---GP 49
             ++M+   +++++L + + +V        + +A YY     P     AC Y N  +   G 
Sbjct:     1 MDMKGTYLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGA 60

Query:    50 MVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYC-RQPCNGILNL 108
                 +S  L+R+G++CG  Y+VRC   A+  P  C  G +V V   ++C     NG  NL
Sbjct:    61 HTAALSGELFRSGESCGGCYQVRCDFPAD--PKWCLRGAAVTVTATNFCPTNNNNGWCNL 118

Query:   109 SQDAFN 114
              +  F+
Sbjct:   119 PRHHFD 124

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA;ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZV52	EGC2_ARATH	No assigned EC number	0.536	0.9312	0.9384	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	131
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	5e-27
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-20
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-09
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	3e-05
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	7e-05
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	0.002

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 97.0 bits (241), Expect = 5e-27
 Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 6   RIFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQAC 65
           RI +  ++++ L S +  A  G A +Y   Y+ SACY     G M+   SD+LW NG+ C
Sbjct: 4   RILIFSTVLVFLFSVSY-ATPGIATFYTS-YTPSACYRGTSFGVMIAAASDSLWNNGRVC 61

Query: 66  GKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVI 125
           GK + V+C    N  PHPC  G SV VK+VD+C   C   L+LS++AF +IA+  AG + 
Sbjct: 62  GKMFTVKCKGPRNAVPHPCT-GKSVTVKIVDHCPSGCASTLDLSREAFAQIANPVAGIIN 120

Query: 126 VEYNP 130
           ++Y P
Sbjct: 121 IDYIP 125

Length = 125

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 78.4 bits (194), Expect = 2e-20
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 51  VTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQ 110
               S +L+ +G ACG+ Y+V+C+  A+     C+   SV V + D C  P     +LS 
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGT-CRVLRSVTVTITDRCPFPPRRHFDLSG 59

Query: 111 DAFNEIADLDAGKVIVEY 128
            AF  +A   AG V VEY
Sbjct: 60  PAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 50.1 bits (120), Expect = 2e-09
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 52  TGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCR------------ 99
             +S AL+ NG +CG  Y + C      +P  CKPG S+ V   ++C             
Sbjct: 2   AALSTALFNNGASCGACYEIMC----VDSPKWCKPGGSITVTATNFCPPNYALSNDNGGW 57

Query: 100 -QPCNGILNLSQDAFNEIADLDAGKVIVEY 128
             P     +LSQ AF +IA   AG V V+Y
Sbjct: 58  CNPPRKHFDLSQPAFEKIAQYKAGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 18/101 (17%)

Query: 5  MRIFMMISIVLCLCSAAVHAAQGNAVYYKPP----YSHSAC----YGNQDNGPMVTGVSD 56
              +++  +LC      ++    A YY  P        AC    YG   NG  V GVS 
Sbjct: 9  FLCVIVLLPLLCKSQDFTYS---RATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS- 64

Query: 57 ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDY 97
           L+RNG  CG  Y+VRC     +AP+ C   + V V V DY
Sbjct: 65 RLYRNGTGCGACYQVRC-----KAPNLCSD-DGVNVVVTDY 99

Length = 247

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)

Query: 40  AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCI-------RGA--NQAPHPCKP 86
           AC YGN   Q  G     +S AL+ NG +CG  + ++C+        G+    A + C P
Sbjct: 45  ACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNFCPP 104

Query: 87  GNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
             ++      +C  P     +LSQ  F +IA   AG V V+Y  V
Sbjct: 105 NLALPNNDGGWCNPPQQH-FDLSQPVFQKIAQYKAGIVPVQYRRV 148

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 40  AC-YGN---QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVV 95
           AC YGN      G     +S AL+ +G +CG+ YR+ C   A+     C  G SV +   
Sbjct: 50  ACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQAD--SRWCIKGASVTITAT 107

Query: 96  DYC 98
           ++C
Sbjct: 108 NFC 110

Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	100.0
PLN00193	256	expansin-A; Provisional	99.97
PLN03023	247	Expansin-like B1; Provisional	99.97
PLN00050	247	expansin A; Provisional	99.97
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.91
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.89
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.49
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	99.3
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	99.27
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.18
PRK10672	361	rare lipoprotein A; Provisional	99.08
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.89
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	95.13

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=100.00  E-value=1.3e-37  Score=220.75  Aligned_cols=121  Identities=41%  Similarity=0.825  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHhhcccceeeEEEEEECCCCCCCCCCCCCCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCC
Q 032886            7 IFMMISIVLCLCSAAVHAAQGNAVYYKPPYSHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKP   86 (131)
Q Consensus         7 ~~~~~~~~~~l~s~~~~~~~G~aT~Y~~~~~~gaC~~~~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~   86 (131)
                      ++|++-++.+|+|+ +...+|+||||++ ++++|||++.+++.++||+|+.+|++|+.||+||||+|.+.....+++|+ 
T Consensus         5 ~~~~~~~~~~~~~~-~~~~~G~AT~Y~~-~~~gAC~~~~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~-   81 (125)
T PLN03024          5 ILIFSTVLVFLFSV-SYATPGIATFYTS-YTPSACYRGTSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCT-   81 (125)
T ss_pred             eHHHHHHHHHHhhh-hcccceEEEEeCC-CCCccccCCCCCCCEeEEeCHHHcCCCcccCceEEEEECCCCcccccccc-
Confidence            44555557788888 9999999999997 57899988888899999999999999999999999999764333456898 


Q ss_pred             CCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCCCCcEEEEEEEE
Q 032886           87 GNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNP  130 (131)
Q Consensus        87 g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~~~G~v~v~w~~  130 (131)
                      +++|+|+|+|+||.+|+.|||||++||++||+++.|+|+|+|.+
T Consensus        82 gksV~V~VtD~CP~~C~~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         82 GKSVTVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             CCeEEEEEEcCCCCCCCCceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            89999999999995589999999999999999999999999974

>PLN00193 expansin-A; Provisional

Probab=99.97  E-value=3e-31  Score=207.50  Aligned_cols=109  Identities=28%  Similarity=0.568  Sum_probs=94.7

Q ss_pred             ccceeeEEEEEECCCCC----CCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEE
Q 032886           21 AVHAAQGNAVYYKPPYS----HSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVV   92 (131)
Q Consensus        21 ~~~~~~G~aT~Y~~~~~----~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v   92 (131)
                      .++|.+++||||+.+++    +||| |++.   +++.++||+|+.+|++|..||+||||+|...  ..++.|.+|++|+|
T Consensus        27 ~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~--~~~~~C~~g~sV~V  104 (256)
T PLN00193         27 PSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQ--ADSRWCIKGASVTI  104 (256)
T ss_pred             CCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCC--CCCccccCCCeEEE
Confidence            45799999999997643    6999 8865   4688999999999999999999999999531  13668976789999


Q ss_pred             EEEeccCCC----------CC---CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           93 KVVDYCRQP----------CN---GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        93 ~V~D~Cp~~----------C~---~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      +|||+||..          |.   .|||||..||.+||....|+|+|+||||
T Consensus       105 t~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRV  156 (256)
T PLN00193        105 TATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRV  156 (256)
T ss_pred             EEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEe
Confidence            999999941          85   7999999999999999999999999997

>PLN03023 Expansin-like B1; Provisional

Probab=99.97  E-value=9.7e-31  Score=203.73  Aligned_cols=103  Identities=38%  Similarity=0.625  Sum_probs=92.4

Q ss_pred             ccceeeEEEEEECCCC----CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEE
Q 032886           21 AVHAAQGNAVYYKPPY----SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVV   92 (131)
Q Consensus        21 ~~~~~~G~aT~Y~~~~----~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v   92 (131)
                      .++|.+++||||++++    .+||| |++.   .++..+||+| .+|++|..||+||||+|.+     ++.|. +++|+|
T Consensus        22 ~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~-----~~~C~-~~~v~V   94 (247)
T PLN03023         22 SQDFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKA-----PNLCS-DDGVNV   94 (247)
T ss_pred             cCCcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCC-----CCccC-CCCeEE
Confidence            4789999999999987    37899 8876   3578899998 9999999999999999964     66898 679999


Q ss_pred             EEEeccCCCCCCcEEcCHHHHHhhcCC-------CCcEEEEEEEEC
Q 032886           93 KVVDYCRQPCNGILNLSQDAFNEIADL-------DAGKVIVEYNPV  131 (131)
Q Consensus        93 ~V~D~Cp~~C~~~lDLS~~aF~~la~~-------~~G~v~v~w~~V  131 (131)
                      +|||.|| ++..|||||..||.+||.+       ..|+|+|+||||
T Consensus        95 ~iTd~~~-~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRV  139 (247)
T PLN03023         95 VVTDYGE-GDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRI  139 (247)
T ss_pred             EEEeCCC-CCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEE
Confidence            9999999 7789999999999999984       569999999997

>PLN00050 expansin A; Provisional

Probab=99.97  E-value=1.1e-30  Score=203.48  Aligned_cols=105  Identities=31%  Similarity=0.615  Sum_probs=93.4

Q ss_pred             cceeeEEEEEECCCCC----CCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEE
Q 032886           22 VHAAQGNAVYYKPPYS----HSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVK   93 (131)
Q Consensus        22 ~~~~~G~aT~Y~~~~~----~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~   93 (131)
                      .+|..++||||+.+++    +||| |++.   +.+.++||+|+.+|++|..||+||||+|.+.    +..|. +++|+|+
T Consensus        23 ~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~----~~~C~-~gsV~V~   97 (247)
T PLN00050         23 SGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVND----NIWCL-PGSIIIT   97 (247)
T ss_pred             CCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCC----CcccC-CCcEEEE
Confidence            6899999999998754    6999 8875   4688999999999999999999999999652    45787 5699999


Q ss_pred             EEeccCC----------CCC---CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           94 VVDYCRQ----------PCN---GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        94 V~D~Cp~----------~C~---~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      |||+||+          .|.   .|||||+.||.+||....|+|+|+||||
T Consensus        98 itd~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRV  148 (247)
T PLN00050         98 ATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRV  148 (247)
T ss_pred             EecCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEe
Confidence            9999994          184   9999999999999999999999999997

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.91  E-value=1.4e-24  Score=145.51  Aligned_cols=74  Identities=42%  Similarity=0.852  Sum_probs=66.2

Q ss_pred             EEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCC----------CC---CcEEcCHHHHHhhc
Q 032886           51 VTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQP----------CN---GILNLSQDAFNEIA  117 (131)
Q Consensus        51 ~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~----------C~---~~lDLS~~aF~~la  117 (131)
                      +||+|+.+|++|+.||+||||+|.+    .|+.|.++++|+|+|||+||..          |.   .|||||+.||.+||
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~----~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA   76 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVD----SPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIA   76 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCC----CCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHh
Confidence            4899999999999999999999964    3667876679999999999942          64   89999999999999


Q ss_pred             CCCCcEEEEEE
Q 032886          118 DLDAGKVIVEY  128 (131)
Q Consensus       118 ~~~~G~v~v~w  128 (131)
                      .++.|+|+|+|
T Consensus        77 ~~~~Gvi~v~y   87 (87)
T smart00837       77 QYKAGIVPVKY   87 (87)
T ss_pred             hhcCCEEeeEC
Confidence            99999999997

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.89  E-value=2.3e-23  Score=136.33  Aligned_cols=76  Identities=43%  Similarity=0.759  Sum_probs=61.0

Q ss_pred             EEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCC-CeEEEEEEeccCCCCC-CcEEcCHHHHHhhcCCCCcEEEEEE
Q 032886           51 VTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPG-NSVVVKVVDYCRQPCN-GILNLSQDAFNEIADLDAGKVIVEY  128 (131)
Q Consensus        51 ~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g-~~v~v~V~D~Cp~~C~-~~lDLS~~aF~~la~~~~G~v~v~w  128 (131)
                      +||++..+|++|..||+|+++++.......+ .|..+ |+|+|+|+|+|| +|. +|||||+.||++|++++.|+++|+|
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~-~~~~~~ksV~v~V~D~Cp-~~~~~~lDLS~~aF~~la~~~~G~i~V~w   78 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATG-TCKVGNKSVTVTVVDRCP-GCPPNHLDLSPAAFKALADPDAGVIPVEW   78 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT---BESEECEEEEEEEEE-T-TSSSSEEEEEHHHHHHTBSTTCSSEEEEE
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccc-eEEecCCeEEEEEEccCC-CCcCCEEEeCHHHHHHhCCCCceEEEEEC
Confidence            6899999999999999999999954432111 16622 999999999999 899 9999999999999999999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.49  E-value=2.9e-13  Score=100.78  Aligned_cols=119  Identities=25%  Similarity=0.379  Sum_probs=93.4

Q ss_pred             CchhHHHHHHHHHHHHHhhc---ccce---eeEEEEEECCCCCCCCC-CCCCCCCceEEEeccccccCC----cCCCCeE
Q 032886            1 MGIEMRIFMMISIVLCLCSA---AVHA---AQGNAVYYKPPYSHSAC-YGNQDNGPMVTGVSDALWRNG----QACGKRY   69 (131)
Q Consensus         1 m~~~~~~~~~~~~~~~l~s~---~~~~---~~G~aT~Y~~~~~~gaC-~~~~~~~~~~aA~s~~~~~~g----~~CG~c~   69 (131)
                      |+..++.+.--+++--.+.+   .+.|   +.|.|||-+..+.+||= ..+.+.+..+.|++..+.+-|    +.-|..+
T Consensus         1 ~~~~~s~~~g~v~~~~~~~s~q~s~awd~~f~G~ATyTgsGYsGGAflLDPI~sd~eITAlNPaqlNlGGipAAmAGaYL   80 (232)
T COG4305           1 MKKIMSAFVGMVLLTIFCFSPQASAAWDDLFEGYATYTGSGYSGGAFLLDPIPSDMEITALNPAQLNLGGIPAAMAGAYL   80 (232)
T ss_pred             CccHHHHHHHHhhhhhhccCCCcccccccccceeEEEecccccCceEEecCcCCcceeeecCHHHcccCCchhhhccceE
Confidence            56666666544443333322   2234   67999998888888888 677788889999998887754    5689999


Q ss_pred             EEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           70 RVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        70 ~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      ||..            |..+.+|.|+|+-|++-.+.||||+.||.+|++..+|+|+|+||-|
T Consensus        81 rVqG------------PKG~TTVYVTDlYPegasGaLDLSpNAFakIGnm~qGrIpvqWrvv  130 (232)
T COG4305          81 RVQG------------PKGKTTVYVTDLYPEGASGALDLSPNAFAKIGNMKQGRIPVQWRVV  130 (232)
T ss_pred             EEEC------------CCCceEEEEecccccccccccccChHHHhhhcchhcCccceeEEEe
Confidence            9986            4677899999999944449999999999999999999999999975

>TIGR00413 rlpA rare lipoprotein A

Probab=99.30  E-value=3.2e-11  Score=91.84  Aligned_cols=87  Identities=21%  Similarity=0.255  Sum_probs=72.6

Q ss_pred             EEEEEECCCCC--CCCCCCCCCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCC-
Q 032886           27 GNAVYYKPPYS--HSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCN-  103 (131)
Q Consensus        27 G~aT~Y~~~~~--~gaC~~~~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~-  103 (131)
                      |.|+||++...  ..|.+.......++||+.+-      +.|..++|++..         + |++|+|+|+|++| -=+ 
T Consensus         1 G~ASwYg~~f~G~~TAnGe~y~~~~~tAAHktL------PlgT~V~VtNl~---------n-grsviVrVnDRGP-f~~g   63 (208)
T TIGR00413         1 GLASWYGPKFHGRKTANGEVYNMKALTAAHKTL------PFNTYVKVTNLH---------N-NRSVIVRINDRGP-FSDD   63 (208)
T ss_pred             CEEeEeCCCCCCCcCCCCeecCCCccccccccC------CCCCEEEEEECC---------C-CCEEEEEEeCCCC-CCCC
Confidence            68999998654  45555556778899998743      689999999875         5 8999999999999 444 


Q ss_pred             CcEEcCHHHHHhhcCCCCcEEEEEEEE
Q 032886          104 GILNLSQDAFNEIADLDAGKVIVEYNP  130 (131)
Q Consensus       104 ~~lDLS~~aF~~la~~~~G~v~v~w~~  130 (131)
                      ..||||+.|+++|+-.+.|+.+|+.+.
T Consensus        64 RiIDLS~aAA~~Lg~~~~G~a~V~vev   90 (208)
T TIGR00413        64 RIIDLSHAAAREIGLISRGVGQVRIEV   90 (208)
T ss_pred             CEEECCHHHHHHcCCCcCceEEEEEEE
Confidence            899999999999999999998888765

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=99.27  E-value=4.2e-11  Score=92.59  Aligned_cols=93  Identities=20%  Similarity=0.280  Sum_probs=74.5

Q ss_pred             ceeeEEEEEECCCCCCCCC-CCC-CCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCC
Q 032886           23 HAAQGNAVYYKPPYSHSAC-YGN-QDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQ  100 (131)
Q Consensus        23 ~~~~G~aT~Y~~~~~~gaC-~~~-~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~  100 (131)
                      ....|.|+|||...++.-- .|+ .+...++||+.+-      .-|..++||+.+         | |++|+|+|.|++|.
T Consensus        81 ~~~~G~ASwYg~~fhgr~TA~Ge~~n~~~~tAAH~TL------P~~t~v~VtNl~---------N-grsvvVRINDRGPf  144 (233)
T COG0797          81 FEQVGYASWYGEKFHGRKTANGERYDMNALTAAHKTL------PLPTYVRVTNLD---------N-GRSVVVRINDRGPF  144 (233)
T ss_pred             ccccceeeeeccccCCccccCcccccccccccccccC------CCCCEEEEEEcc---------C-CcEEEEEEeCCCCC
Confidence            3467999999976654444 343 4678999999854      458999999987         6 99999999999994


Q ss_pred             CCCCcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886          101 PCNGILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus       101 ~C~~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      .=+..||||..|+++|+....|+.+|+.+++
T Consensus       145 ~~gRiIDlS~aAA~~l~~~~~G~a~V~i~~l  175 (233)
T COG0797         145 VSGRIIDLSKAAADKLGMIRSGVAKVRIEVL  175 (233)
T ss_pred             CCCcEeEcCHHHHHHhCCccCceEEEEEEEe
Confidence            3338899999999999999999888777653

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.18  E-value=1.8e-11  Score=85.15  Aligned_cols=57  Identities=39%  Similarity=0.693  Sum_probs=43.1

Q ss_pred             CcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC----CCCcEEEEEEEEC
Q 032886           62 GQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD----LDAGKVIVEYNPV  131 (131)
Q Consensus        62 g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~----~~~G~v~v~w~~V  131 (131)
                      ...||+|++||++.         + |.+++|+|||+|+.   ++|||.+.+|++|-.    ...|.+.|+|++|
T Consensus        57 q~~CGkClrVTNt~---------t-ga~~~~RIVDqCsn---GGLDld~~vF~~iDtdG~G~~~Ghl~V~y~fV  117 (119)
T PF00967_consen   57 QDSCGKCLRVTNTA---------T-GAQVTVRIVDQCSN---GGLDLDPTVFNQIDTDGQGYAQGHLIVDYEFV  117 (119)
T ss_dssp             GGGTT-EEEEE-TT---------T---EEEEEEEEE-SS---SSEES-SSSHHHH-SSSHHHHHTEEEEEEEEE
T ss_pred             cccccceEEEEecC---------C-CcEEEEEEEEcCCC---CCcccChhHHhhhccCCcccccceEEEEEEEE
Confidence            35899999999864         4 89999999999994   689999999999953    2469999999987

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PRK10672 rare lipoprotein A; Provisional

Probab=99.08  E-value=1.8e-09  Score=88.25  Aligned_cols=90  Identities=17%  Similarity=0.171  Sum_probs=72.5

Q ss_pred             eeEEEEEECCCCCCCCC--CCCCCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCC
Q 032886           25 AQGNAVYYKPPYSHSAC--YGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPC  102 (131)
Q Consensus        25 ~~G~aT~Y~~~~~~gaC--~~~~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C  102 (131)
                      ..|.|+|||....+..-  +..++...++||+.+-      ..|..++||+.+         | ||+|+|+|+|++|..=
T Consensus        79 ~~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~tL------Plps~vrVtNl~---------n-grsvvVrVnDRGP~~~  142 (361)
T PRK10672         79 QAGLAAIYDAEAGSNLTASGERFDPNALTAAHPTL------PIPSYVRVTNLA---------N-GRMIVVRINDRGPYGP  142 (361)
T ss_pred             eEEEEEEeCCccCCCcCcCceeecCCcCeeeccCC------CCCCEEEEEECC---------C-CcEEEEEEeCCCCCCC
Confidence            37999999997654433  4445778999998753      579999999976         5 9999999999999432


Q ss_pred             CCcEEcCHHHHHhhcCCCCcEEEEEEEE
Q 032886          103 NGILNLSQDAFNEIADLDAGKVIVEYNP  130 (131)
Q Consensus       103 ~~~lDLS~~aF~~la~~~~G~v~v~w~~  130 (131)
                      +.-||||..|+++|+-...++|.|+.-.
T Consensus       143 gRiiDLS~aAA~~Lg~~~~~~V~ve~i~  170 (361)
T PRK10672        143 GRVIDLSRAAADRLNTSNNTKVRIDPII  170 (361)
T ss_pred             CCeeEcCHHHHHHhCCCCCceEEEEEEe
Confidence            3899999999999998777888887643

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.89  E-value=1.5e-08  Score=71.40  Aligned_cols=67  Identities=30%  Similarity=0.605  Sum_probs=50.6

Q ss_pred             CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC---CCCcE
Q 032886           48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD---LDAGK  123 (131)
Q Consensus        48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~---~~~G~  123 (131)
                      -..+.+.+. .-|+ .+.||.|+|++.           + |++|.+..+|.-+    ..|++|.+||++|++   .+.|+
T Consensus        42 Fp~IGg~~~V~gWn-S~~CGtC~~lty-----------~-g~si~vlaID~a~----~gfnis~~A~n~LT~g~a~~lG~  104 (119)
T PF07249_consen   42 FPYIGGAPAVAGWN-SPNCGTCWKLTY-----------N-GRSIYVLAIDHAG----GGFNISLDAMNDLTNGQAVELGR  104 (119)
T ss_dssp             TTSEEEETT--STT--TTTT-EEEEEE-----------T-TEEEEEEEEEE-S----SSEEE-HHHHHHHHTS-CCCC-E
T ss_pred             CCeeccccccccCC-CCCCCCeEEEEE-----------C-CeEEEEEEEecCC----CcccchHHHHHHhcCCcccceeE
Confidence            345666654 3574 578999999998           4 8999999999988    789999999999986   46899


Q ss_pred             EEEEEEEC
Q 032886          124 VIVEYNPV  131 (131)
Q Consensus       124 v~v~w~~V  131 (131)
                      |+++|++|
T Consensus       105 V~a~~~qV  112 (119)
T PF07249_consen  105 VDATYTQV  112 (119)
T ss_dssp             EE-EEEEE
T ss_pred             EEEEEEEc
Confidence            99999986

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=95.13  E-value=0.035  Score=42.45  Aligned_cols=41  Identities=17%  Similarity=0.308  Sum_probs=28.2

Q ss_pred             cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCC-CcEEcCHH
Q 032886           63 QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCN-GILNLSQD  111 (131)
Q Consensus        63 ~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~-~~lDLS~~  111 (131)
                      ..|++||+++-++..      - .||+.+|+|++.-- .=. +||||.-+
T Consensus        82 ~~Cc~Cy~LtFt~g~------l-~GKkmiVQ~tNtG~-dlg~n~FDl~iP  123 (201)
T PF02015_consen   82 SWCCACYELTFTSGP------L-KGKKMIVQVTNTGG-DLGSNQFDLAIP  123 (201)
T ss_dssp             HHTT-EEEEEE-SST------T-TT-EEEEEEEEE-T-TTTTTEEEEE-T
T ss_pred             CcccceEEEEEcCCC------c-CCCEeEEEecccCC-CCCCCeEEEEeC
Confidence            579999999998642      1 39999999999886 333 99999743

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	131
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	6e-18
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	1e-12
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	7e-12

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 74.9 bits (184), Expect = 6e-18
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 17/111 (15%)

Query: 26  QGNAVYYKPPYSHSAC-YGNQDNGPMVTGVSDALWRNG----QACGKRYRVRCIRGANQA 80
           +G A Y    YS  A       +   +T ++ A    G       G    V         
Sbjct: 8   EGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG------- 60

Query: 81  PHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVIVEYNPV 131
                P     V V D   +   G L+LS +AF +I ++  GK+ +++  V
Sbjct: 61  -----PKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVV 106

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score = 61.4 bits (148), Expect = 1e-12
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 26  QGNAVYY------KPPYSHSAC-YGNQDNGP---MVTGVSDALWRNGQACGKRYRVRCIR 75
              A +Y        P +  AC   N +  P   M    +  ++++G+ CG  Y VRC  
Sbjct: 21  TARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRC-- 78

Query: 76  GANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADLDAGKVI 125
              + P       +V +  ++Y         +LS  AF  +A       I
Sbjct: 79  --KEKPECSGNPVTVYITDMNYEP-IAPYHFDLSGKAFGSLAKPGLNDKI 125

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score = 59.5 bits (143), Expect = 7e-12
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 18/117 (15%)

Query: 27  GNAVYYKPPYSHSAC-YGNQD---NGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPH 82
           G      P  +  AC Y + D      M    +  ++++G+ CG  + ++C +     P 
Sbjct: 28  GKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PE 82

Query: 83  PCKPGNSVVVKVVDYCRQPCNGI-LNLSQDAFNEIAD-------LDAGKVIVEYNPV 131
            C     VV  + D   +P      +LS  AF  +A          AG++ +++  V
Sbjct: 83  ACSGEPVVVH-ITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.97
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.97
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.97
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.93
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.82
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.81
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.78
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.7
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.7
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.66
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.65
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	98.57
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	95.95

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.97  E-value=7e-31  Score=203.83  Aligned_cols=105  Identities=29%  Similarity=0.494  Sum_probs=92.5

Q ss_pred             ccceeeEEEEEECCCC------CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeE
Q 032886           21 AVHAAQGNAVYYKPPY------SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSV   90 (131)
Q Consensus        21 ~~~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v   90 (131)
                      ...|..|+||||+.++      .+||| |++.   +++.++||+|+.+|++|..||+||||+|.+     ++.|+ +++|
T Consensus        16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-----~~~C~-~~sv   89 (245)
T 2hcz_X           16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-----KPECS-GNPV   89 (245)
T ss_dssp             CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-----SSSBC-SSCE
T ss_pred             CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-----CCccC-CCCE
Confidence            3679999999999986      37999 7764   468999999999999999999999999975     34798 8999


Q ss_pred             EEEEEeccCCCCC-CcEEcCHHHHHhhcC-------CCCcEEEEEEEEC
Q 032886           91 VVKVVDYCRQPCN-GILNLSQDAFNEIAD-------LDAGKVIVEYNPV  131 (131)
Q Consensus        91 ~v~V~D~Cp~~C~-~~lDLS~~aF~~la~-------~~~G~v~v~w~~V  131 (131)
                      +|+|||+||+.++ .|||||+.||++||+       ++.|+|+|+||||
T Consensus        90 ~V~VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (245)
T 2hcz_X           90 TVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV  138 (245)
T ss_dssp             EEEEEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEE
T ss_pred             EEEEEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEE
Confidence            9999999992114 999999999999998       7899999999997

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.97  E-value=8.6e-31  Score=202.88  Aligned_cols=103  Identities=24%  Similarity=0.532  Sum_probs=89.5

Q ss_pred             ccceeeEEEEEECCCC------CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeE
Q 032886           21 AVHAAQGNAVYYKPPY------SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSV   90 (131)
Q Consensus        21 ~~~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v   90 (131)
                      .+.|.+|+||||+.++      .+||| |++.   +.+.++||+|+.+|++|..||+||||+|.+     ++.|. +++|
T Consensus        16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~-----~~~C~-~~~v   89 (241)
T 1n10_A           16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACS-GEPV   89 (241)
T ss_dssp             CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBC-SCCE
T ss_pred             cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC-----CCccC-CCCE
Confidence            3679999999999875      37999 7774   568999999999999999999999999975     34698 8899


Q ss_pred             EEEEEeccCCCC--C-CcEEcCHHHHHhhcC-------CCCcEEEEEEEEC
Q 032886           91 VVKVVDYCRQPC--N-GILNLSQDAFNEIAD-------LDAGKVIVEYNPV  131 (131)
Q Consensus        91 ~v~V~D~Cp~~C--~-~~lDLS~~aF~~la~-------~~~G~v~v~w~~V  131 (131)
                      +|+|||+|+  |  + .|||||+.||.+||+       ++.|+|+|+||||
T Consensus        90 ~V~VtD~C~--C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (241)
T 1n10_A           90 VVHITDDNE--EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  138 (241)
T ss_dssp             EEEEEEECS--SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEEEeEecC--CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEE
Confidence            999999997  5  2 999999999999998       6899999999998

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.97  E-value=2.3e-30  Score=196.69  Aligned_cols=97  Identities=25%  Similarity=0.332  Sum_probs=88.4

Q ss_pred             cceeeEEEEEECCCCCCCCC-CCCCCCCceEEEeccccccCC----cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEe
Q 032886           22 VHAAQGNAVYYKPPYSHSAC-YGNQDNGPMVTGVSDALWRNG----QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVD   96 (131)
Q Consensus        22 ~~~~~G~aT~Y~~~~~~gaC-~~~~~~~~~~aA~s~~~~~~g----~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D   96 (131)
                      .+.++|+||||++...+||| +...+++.++||+|+.+|++|    +.||+||||+|           . +++|+|+|+|
T Consensus         4 ~~~~~G~aT~Y~~g~~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~-----------~-~gsv~V~v~D   71 (208)
T 3d30_A            4 DDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG-----------P-KGKTTVYVTD   71 (208)
T ss_dssp             TCCEEEEEEECSTTSSSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE-----------T-TEEEEEEEEE
T ss_pred             CCcEEEEEEEcCCCCCCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe-----------C-CCcEEEEEEE
Confidence            46789999999997779999 554567899999999999987    79999999998           2 5689999999


Q ss_pred             ccCCCCC-CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           97 YCRQPCN-GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        97 ~Cp~~C~-~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      +|| +|+ +|||||+.||++|++++.|+++|+|++|
T Consensus        72 ~CP-~C~~~~~DLS~~aF~~la~~~~G~i~v~~~~V  106 (208)
T 3d30_A           72 LYP-EGARGALDLSPNAFRKIGNMKDGKINIKWRVV  106 (208)
T ss_dssp             ECT-TCCTTCEEECHHHHHHHSCGGGSSEEEEEEEE
T ss_pred             CCC-CCCCCeEECCHHHHHHhcccCCCEEEEEEEEe
Confidence            999 899 9999999999999999999999999997

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.93  E-value=4.1e-26  Score=168.61  Aligned_cols=107  Identities=21%  Similarity=0.402  Sum_probs=88.4

Q ss_pred             ceeeEEEEEECCCCCCCCC-CCC-----C---CCCceEEEeccccccCC------cCCCCeEEEEEccCCCC-CCCCCCC
Q 032886           23 HAAQGNAVYYKPPYSHSAC-YGN-----Q---DNGPMVTGVSDALWRNG------QACGKRYRVRCIRGANQ-APHPCKP   86 (131)
Q Consensus        23 ~~~~G~aT~Y~~~~~~gaC-~~~-----~---~~~~~~aA~s~~~~~~g------~~CG~c~~v~~~~~~~~-~~~~c~~   86 (131)
                      -|..+.||||+.. .+||| |++     .   +.+.++||||+.+|++|      +.||+||||+|++.... .+..|.+
T Consensus        13 g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~   91 (181)
T 1wc2_A           13 GKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE   91 (181)
T ss_dssp             TEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred             CccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCC
Confidence            4788999999996 68999 883     2   24889999999999997      89999999999763200 0123456


Q ss_pred             CCeEEEEEEeccCC------CCC--------------CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           87 GNSVVVKVVDYCRQ------PCN--------------GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        87 g~~v~v~V~D~Cp~------~C~--------------~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      |++|+|+|||+||.      +|+              .|||||..| .+|+....|+++|+||||
T Consensus        92 g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV  155 (181)
T 1wc2_A           92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVV  155 (181)
T ss_dssp             TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEE
T ss_pred             CCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEE
Confidence            88999999999993      583              599999999 899998999999999998

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.82  E-value=1e-19  Score=122.37  Aligned_cols=90  Identities=22%  Similarity=0.280  Sum_probs=79.9

Q ss_pred             eeEEEEEECCCC--CCCCCCCCCCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCC
Q 032886           25 AQGNAVYYKPPY--SHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPC  102 (131)
Q Consensus        25 ~~G~aT~Y~~~~--~~gaC~~~~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C  102 (131)
                      ..|.|+||++..  ...||+..++.+.++||+.+      .+||..++||+..         + ||+|+|+|+|+|| .|
T Consensus         2 ~~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~t------lP~gt~vrVtNl~---------n-GksVvVrVnDRGP-~~   64 (95)
T 4avr_A            2 DTGEASYYGSRHAGLRTASGERYNPNAMTAAHRT------LPFGARVRVTNLD---------N-RRSVVVRINDRGP-FR   64 (95)
T ss_dssp             EEEEEEECCGGGTTSBCTTSCBCCTTSCEEECSS------SCTTCEEEEEETT---------T-CCEEEEEEEECCC-CS
T ss_pred             CEEEEEEECCccCCCCCCCccCcCCCCCEEEcCC------CCCCcEEEEEECC---------C-CcEEEEEEccCCC-CC
Confidence            579999999864  36888777888999999974      4799999999865         5 9999999999999 78


Q ss_pred             C-CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886          103 N-GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus       103 ~-~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      . ..||||+.||++|+..+.|+.+|+|+.+
T Consensus        65 ~griIDLS~aAa~~Lg~~~~G~~~V~ve~~   94 (95)
T 4avr_A           65 RGRIIDVSRKAAEGLGMIRSGVAPVRIESL   94 (95)
T ss_dssp             TTEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred             CCCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence            8 8899999999999999999999999875

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.81  E-value=1.7e-21  Score=136.91  Aligned_cols=94  Identities=30%  Similarity=0.486  Sum_probs=70.0

Q ss_pred             eeeEEEEE--ECCCC---------CCCCCCCCCCCCceEEEeccccc---------cCCcCCCCeEEEEEccCCCCCCCC
Q 032886           24 AAQGNAVY--YKPPY---------SHSACYGNQDNGPMVTGVSDALW---------RNGQACGKRYRVRCIRGANQAPHP   83 (131)
Q Consensus        24 ~~~G~aT~--Y~~~~---------~~gaC~~~~~~~~~~aA~s~~~~---------~~g~~CG~c~~v~~~~~~~~~~~~   83 (131)
                      ..+-+|||  |.+..         ..++|.. ...+...++.+...|         ++++.||+|++|++..        
T Consensus         3 ~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t-~da~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~--------   73 (125)
T 1bw3_A            3 ANDVRATYHYYRPAQNNWDLGAPAVSAYCAT-WDASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA--------   73 (125)
T ss_dssp             EEEEEEECCCSSCGGGTTCTTSTTTCCTTHH-HHTTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT--------
T ss_pred             ccceEEEEEEecCCCcCcccccceeeEeeec-ccCCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC--------
Confidence            34567785  66621         3588843 212223344444444         6678999999999853        


Q ss_pred             CCCCCeEEEEEEeccCCCCCCcEEcC-HHHHHhhcC----CCCcEEEEEEEEC
Q 032886           84 CKPGNSVVVKVVDYCRQPCNGILNLS-QDAFNEIAD----LDAGKVIVEYNPV  131 (131)
Q Consensus        84 c~~g~~v~v~V~D~Cp~~C~~~lDLS-~~aF~~la~----~~~G~v~v~w~~V  131 (131)
                       + |++|+|+|+|+|| .|  +|||| +.||++|+.    ++.|+++|+|++|
T Consensus        74 -n-GksV~V~VvD~CP-~g--gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V  121 (125)
T 1bw3_A           74 -T-GAQITARIVDQCA-NG--GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV  121 (125)
T ss_dssp             -T-TEEEEEEEEECCS-SS--SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred             -C-CCEEEEEEEEeCC-CC--CCCCCCHHHHHHHhccCCcccCcEEEEEEEEE
Confidence             4 8999999999999 65  49999 999999998    6799999999987

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.78  E-value=2.4e-08  Score=70.08  Aligned_cols=68  Identities=37%  Similarity=0.648  Sum_probs=57.5

Q ss_pred             CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC-CCCcEE-
Q 032886           48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD-LDAGKV-  124 (131)
Q Consensus        48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~-~~~G~v-  124 (131)
                      -.++.+... ..|+ .+.||+|+||+..          + |++|.++.+|.-+    +.|+++.+||++|++ ...|+| 
T Consensus        49 FP~IGga~~iagWN-S~~CGtC~~lty~----------n-g~sI~vlaID~A~----~gFnIs~~Amn~LT~G~~lG~V~  112 (129)
T 2kqa_A           49 FPNVGGIPDIAGWD-SPSCGTCWKVTIP----------N-GNSIFIRGVDSGR----GGFNVNPTAFTKLVGSTEAGRVD  112 (129)
T ss_dssp             SSSEEEETTCCSTT-CTTCSCEEEEEET----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHSSSSSCCBC
T ss_pred             CCeeccchhhccCC-CCCCCceEEEEEc----------C-CCEEEEEEEccCC----CceeehHHHHHHhcCCcccCcEe
Confidence            355555543 4576 6899999999983          3 8999999999999    789999999999986 788999 


Q ss_pred             EEEEEEC
Q 032886          125 IVEYNPV  131 (131)
Q Consensus       125 ~v~w~~V  131 (131)
                      +++|++|
T Consensus       113 ~a~~~qV  119 (129)
T 2kqa_A          113 NVNYVQV  119 (129)
T ss_dssp             SCEEEEC
T ss_pred             EEEEEEc
Confidence            9999987

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.70  E-value=1.6e-08  Score=70.40  Aligned_cols=67  Identities=25%  Similarity=0.499  Sum_probs=54.9

Q ss_pred             CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC-C--CCcE
Q 032886           48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD-L--DAGK  123 (131)
Q Consensus        48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~-~--~~G~  123 (131)
                      -.++.+... .-|+ .+.||.|+|++.           + |++|.|..+|.-+    ..|++|.+||+.|++ .  ..|+
T Consensus        43 FP~IGg~~~i~gwn-s~~CGtC~~lty-----------~-g~si~vlaID~a~----~Gfnis~~A~n~LT~G~a~~lG~  105 (120)
T 3m3g_A           43 FPYIGGAAAVAGWN-SASCGTCWKLQY-----------S-GHTIYVLAVDHAA----SGFNIALDAMNALTGGQAVQLGR  105 (120)
T ss_dssp             TTSEEEETTCCSTT-CTTTTCEEEEEE-----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCE
T ss_pred             CCccccccccccCC-CCCCCceEEEEE-----------C-CeEEEEEEEecCC----CceeecHHHHHHhhCCcceeeee
Confidence            345655543 3465 478999999998           4 8999999999998    789999999999985 3  3499


Q ss_pred             EEEEEEEC
Q 032886          124 VIVEYNPV  131 (131)
Q Consensus       124 v~v~w~~V  131 (131)
                      |+++|++|
T Consensus       106 V~a~~~~V  113 (120)
T 3m3g_A          106 VSATATQV  113 (120)
T ss_dssp             EECEEEEE
T ss_pred             EeEEEEEc
Confidence            99999986

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.70  E-value=2.1e-08  Score=69.93  Aligned_cols=67  Identities=24%  Similarity=0.422  Sum_probs=55.2

Q ss_pred             eEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcEEE
Q 032886           50 MVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGKVI  125 (131)
Q Consensus        50 ~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~v~  125 (131)
                      ++.+... .-|++ +.||.|+|++...         + ||+|.+..+|.-+    ..|+||.+||+.|++-   +.|+|+
T Consensus        45 FIGg~~~V~gwnS-~~CGtC~~lty~~---------~-g~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V~  109 (122)
T 3sul_A           45 YVGAVDTITGWNS-ESCGTCYQITWSG---------T-GKTIHVVGVDVAG----NGFNVGQRAMDDLTNGQAVALGNID  109 (122)
T ss_dssp             EEEEETTCCSTTC-TTTTCEEEEEETT---------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSEEE
T ss_pred             ccccccccccCCC-CCCCceEEEEEcC---------C-CcEEEEEEEecCC----CceeehHHHHHHhcCCcceecceEe
Confidence            3655543 45765 8999999999842         3 8999999999999    7899999999999852   359999


Q ss_pred             EEEEEC
Q 032886          126 VEYNPV  131 (131)
Q Consensus       126 v~w~~V  131 (131)
                      ++|++|
T Consensus       110 a~~~qV  115 (122)
T 3sul_A          110 VTATLV  115 (122)
T ss_dssp             EEEEEE
T ss_pred             EEEEEc
Confidence            999986

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.66  E-value=2.5e-08  Score=69.96  Aligned_cols=72  Identities=22%  Similarity=0.378  Sum_probs=55.4

Q ss_pred             CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcE
Q 032886           48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGK  123 (131)
Q Consensus        48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~  123 (131)
                      -.++.+... .-|+ .+.||.|+|++..+.+       ...++|.|..+|.-+    ..|+||.+||+.|++-   ..|+
T Consensus        43 FP~IGg~~~i~gwn-s~~CGtC~~lty~g~~-------~~~~si~vlaID~a~----~Gfnis~~Amn~LT~g~a~~lG~  110 (127)
T 3suj_A           43 FPCIGGSSDIAGYN-SPNCGSCYQLTYSSAH-------TTPKSIYMVAIDRSA----EGFTASKQAMDDLTNKRAEELGT  110 (127)
T ss_dssp             TTSEEEETTCCSTT-CTTTTCEEEEEECCSS-------SCCEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSS
T ss_pred             CCeeccccccccCC-CCCCCceEEEEECCCC-------CcceEEEEEEEecCC----CceeecHHHHHHhcCCcccccee
Confidence            345555542 3465 4789999999995321       124899999999999    7899999999999853   3589


Q ss_pred             EEEEEEEC
Q 032886          124 VIVEYNPV  131 (131)
Q Consensus       124 v~v~w~~V  131 (131)
                      |+++|++|
T Consensus       111 V~~~~~~V  118 (127)
T 3suj_A          111 VNVDVRKV  118 (127)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEe
Confidence            99999986

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.65  E-value=2.4e-08  Score=69.96  Aligned_cols=71  Identities=23%  Similarity=0.329  Sum_probs=55.7

Q ss_pred             CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcE
Q 032886           48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGK  123 (131)
Q Consensus        48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~  123 (131)
                      -.++.+... .-|+ .+.||.|+|++..+..       . .|+|.|..+|.-+    ..|+||.+||+.|++-   +.|+
T Consensus        44 FP~IGg~~~i~gwn-S~~CGtC~~lty~g~~-------~-~~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~  110 (125)
T 3suk_A           44 FPHIGASSDIGGFN-SPACGNCYTISFTFQG-------V-TRSINLVAIDHAG----NGFNVAQAAMDELTNGNAVALGT  110 (125)
T ss_dssp             TTSEEEETTCCSTT-CTTTTCEEEEEEEETT-------E-EEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCE
T ss_pred             CCeeccccccccCC-CCCCCeeEEEEEcCCC-------c-ceEEEEEEEecCC----CceeecHHHHHHhcCCcccccce
Confidence            355665553 3465 4789999999984311       1 4999999999998    7899999999999862   3599


Q ss_pred             EEEEEEEC
Q 032886          124 VIVEYNPV  131 (131)
Q Consensus       124 v~v~w~~V  131 (131)
                      |+++|++|
T Consensus       111 V~~~~~~V  118 (125)
T 3suk_A          111 IDVQSQQV  118 (125)
T ss_dssp             EEEEEEEE
T ss_pred             EeEEEEEc
Confidence            99999986

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=98.57  E-value=2.1e-07  Score=65.71  Aligned_cols=66  Identities=24%  Similarity=0.328  Sum_probs=54.2

Q ss_pred             CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCc--EEcCHHHHHhhcCC----
Q 032886           46 DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGI--LNLSQDAFNEIADL----  119 (131)
Q Consensus        46 ~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~--lDLS~~aF~~la~~----  119 (131)
                      +.-..+.+..   |+ ...||.|+||++           + |++|.|..+|.-.    +.  ||||.+||+.|++-    
T Consensus        45 p~FP~igg~~---wn-s~~CGtCwkLtY-----------~-G~sI~vlaID~a~----~g~~FnIs~~Amn~LT~G~~a~  104 (136)
T 3sum_A           45 LNFPHFVAAP---EA-QTECGSCWKLRY-----------K-GNHAFVTVVDRVE----EANLFVGGTDLVKNLTTFNGAP  104 (136)
T ss_dssp             TTTTSEEECC---BT-TBCTTCEEEEEE-----------T-TEEEEEEEEECCC----STTEEEECHHHHHHHTCBTTBC
T ss_pred             CCCCcccccc---cC-CCCCCceEEEEE-----------C-CeEEEEEEEecCC----CcceEeehHHHHHHHhCCCccc
Confidence            3334566654   54 578999999998           4 8999999999998    67  99999999999853    


Q ss_pred             ---CCcEEEE-EEEEC
Q 032886          120 ---DAGKVIV-EYNPV  131 (131)
Q Consensus       120 ---~~G~v~v-~w~~V  131 (131)
                         +.|+|++ +|++|
T Consensus       105 ~a~elG~Vda~~~~qV  120 (136)
T 3sum_A          105 EGYDWGTAQLFSAYQV  120 (136)
T ss_dssp             HHHHHSEEECSEEEEE
T ss_pred             cceecceeeeeEEEEc
Confidence               2599999 99986

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=95.95  E-value=0.0066  Score=45.52  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=29.3

Q ss_pred             cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCC-CcEEcCH
Q 032886           63 QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCN-GILNLSQ  110 (131)
Q Consensus        63 ~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~-~~lDLS~  110 (131)
                      ..|++||+++-++..      .+ ||+.+|+|++... .=. +||||.-
T Consensus        84 ~~Cc~C~~LtFt~~~------~~-GKkmiVQ~TNtG~-Dl~~n~FDl~i  124 (210)
T 2eng_A           84 GWCCACYELTFTSGP------VA-GKKMVVQSTSTGG-DLGSNHFDLNI  124 (210)
T ss_dssp             HHTTCEEEEEECSGG------GT-TCEEEEEEEEC------CCEEEEEC
T ss_pred             cccceeEEEEEcCCC------cC-CCEEEEEEecccC-CCCCCceeEec
Confidence            469999999997642      24 9999999999997 433 9999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	131
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	3e-14
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	1e-12

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 63.1 bits (153), Expect = 3e-14
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 22/123 (17%)

Query: 26  QGNAVYYKPPYSHS------AC-YGNQDNGP---MVTGVSDALWRNGQACGKRYRVRCIR 75
              + +Y  P          AC Y + D  P   M    +  ++++G+ CG  + ++C +
Sbjct: 19  DAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK 78

Query: 76  GANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAF-------NEIADLDAGKVIVEY 128
                P  C     VV    D          +LS  AF       +E     AG++ +++
Sbjct: 79  -----PEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQF 133

Query: 129 NPV 131
             V
Sbjct: 134 RRV 136

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 59.3 bits (143), Expect = 1e-12
 Identities = 17/137 (12%), Positives = 35/137 (25%), Gaps = 34/137 (24%)

Query: 29  AVYYKPPYSHSACYGN--------QDNGPMVTGVSDALWRN------GQACGKRYRVRCI 74
              Y   +  +   G          + G  V   S   + +      GQ CG+  ++   
Sbjct: 19  TTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTT 78

Query: 75  RGANQA-PHPCKPGNSVVVKVVDYC--RQPCNGILNLS-----------------QDAFN 114
            G       P + G S    + + C    P     N                   ++  +
Sbjct: 79  GGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGRS 138

Query: 115 EIADLDAGKVIVEYNPV 131
           ++  +        +  V
Sbjct: 139 QVTGMGWNNPETTWEVV 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	131
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.95
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.82
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	95.79

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=5e-33  Score=198.85  Aligned_cols=105  Identities=25%  Similarity=0.558  Sum_probs=90.2

Q ss_pred             ccceeeEEEEEECCCC------CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeE
Q 032886           21 AVHAAQGNAVYYKPPY------SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSV   90 (131)
Q Consensus        21 ~~~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v   90 (131)
                      ..+|.+|+||||+.++      .+||| |++.   +.+.++||+|+.+|++|..||+||||+|.+     ++.|. +++|
T Consensus        14 ~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~-----~~~c~-~~sv   87 (143)
T d1n10a2          14 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACS-GEPV   87 (143)
T ss_dssp             CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBC-SCCE
T ss_pred             CCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCC-----CCccc-CCCE
Confidence            4689999999998754      26999 7764   468999999999999999999999999975     56887 8999


Q ss_pred             EEEEEeccCCCCC-CcEEcCHHHHHhhcCC-------CCcEEEEEEEEC
Q 032886           91 VVKVVDYCRQPCN-GILNLSQDAFNEIADL-------DAGKVIVEYNPV  131 (131)
Q Consensus        91 ~v~V~D~Cp~~C~-~~lDLS~~aF~~la~~-------~~G~v~v~w~~V  131 (131)
                      +|+|||.||..|. +|||||+.||.+||+.       +.|+|+|+||||
T Consensus        88 ~V~vtd~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV  136 (143)
T d1n10a2          88 VVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  136 (143)
T ss_dssp             EEEEEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEEEEecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEE
Confidence            9999999994345 8999999999999985       579999999998

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.95  E-value=2.9e-28  Score=179.12  Aligned_cols=108  Identities=19%  Similarity=0.375  Sum_probs=88.9

Q ss_pred             cceeeEEEEEECCCCCCCCC-CCCCC--------CCceEEEeccccccC------CcCCCCeEEEEEccCCCC-CCCCCC
Q 032886           22 VHAAQGNAVYYKPPYSHSAC-YGNQD--------NGPMVTGVSDALWRN------GQACGKRYRVRCIRGANQ-APHPCK   85 (131)
Q Consensus        22 ~~~~~G~aT~Y~~~~~~gaC-~~~~~--------~~~~~aA~s~~~~~~------g~~CG~c~~v~~~~~~~~-~~~~c~   85 (131)
                      .-|..+++|||+.. ..||| |++..        .+.++||+|+.+|++      |+.||+||||+|++.... .+..|.
T Consensus        12 ~g~~~A~aT~Ygd~-~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~   90 (180)
T d1wc2a1          12 NGKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR   90 (180)
T ss_dssp             TTEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred             CCccccceEEeCCC-CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCCCCC
Confidence            45889999999985 68999 87752        358999999999999      889999999999864321 122333


Q ss_pred             CCCeEEEEEEeccCC------CCC--------------CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886           86 PGNSVVVKVVDYCRQ------PCN--------------GILNLSQDAFNEIADLDAGKVIVEYNPV  131 (131)
Q Consensus        86 ~g~~v~v~V~D~Cp~------~C~--------------~~lDLS~~aF~~la~~~~G~v~v~w~~V  131 (131)
                      ++++|+|||||+||.      +|+              .||||| .+|.+|+....|+|+|+||||
T Consensus        91 ~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV  155 (180)
T d1wc2a1          91 EGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVV  155 (180)
T ss_dssp             TTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEE
T ss_pred             CCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEe
Confidence            478999999999994      364              299998 599999999999999999998

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.82  E-value=9.4e-10  Score=73.84  Aligned_cols=56  Identities=34%  Similarity=0.615  Sum_probs=47.8

Q ss_pred             cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcC-HHHHHhhcC----CCCcEEEEEEEEC
Q 032886           63 QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLS-QDAFNEIAD----LDAGKVIVEYNPV  131 (131)
Q Consensus        63 ~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS-~~aF~~la~----~~~G~v~v~w~~V  131 (131)
                      ..||+|++||++.         + |.+++++|||+|..   +.|||- +..|++|-.    ...|.+.|+|++|
T Consensus        61 ~sCGkclrvTN~a---------t-ga~~~~RiVDqCsn---gGlDLD~~~vFn~iDtdG~G~~~Ghl~V~y~fV  121 (125)
T d1bw3a_          61 AACGKCLRVTNPA---------T-GAQITARIVDQCAN---GGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV  121 (125)
T ss_dssp             GGTTCEEEEEETT---------T-TEEEEEEEEECCSS---SSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred             ccccceEEeeecc---------c-CcEEEEEEeecccC---CCCccccHhhhheecCCCcccccccEEEEEEEe
Confidence            5799999999864         4 89999999999984   889999 789999953    2468899999986

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=95.79  E-value=0.004  Score=44.84  Aligned_cols=40  Identities=18%  Similarity=0.261  Sum_probs=29.0

Q ss_pred             cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCC-CcEEcCH
Q 032886           63 QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCN-GILNLSQ  110 (131)
Q Consensus        63 ~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~-~~lDLS~  110 (131)
                      ..|.+|||++-++...       .||+.+|+|++.-- .=. +||||.-
T Consensus        84 ~~Cc~Cy~LtFTs~~~-------~GKkMiVQ~tNTGg-Dlg~n~FDl~i  124 (210)
T d2enga_          84 GWCCACYELTFTSGPV-------AGKKMVVQSTSTGG-DLGSNHFDLNI  124 (210)
T ss_dssp             HHTTCEEEEEECSGGG-------TTCEEEEEEEEC------CCEEEEEC
T ss_pred             ccccccEEEEeecCCc-------CCCEEEEEEeccCC-ccCCCeeeEec
Confidence            5699999999986421       39999999999876 333 9999863