Citrus Sinensis ID: 032977

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Secondary Structure (PSIPRED)
cEEEEcccccccccccccccEEEcccEEEEEEEEEEEEccccEEccccccccccccccccccccEEEccEEEcccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccHHHHcccccEEEcccEEEEEEcEEEEEccccEEcccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mlvyqdlltgdellsdsfpykeiengilwevegkWVVQGAvdvdiganpsaegadedegvddqavKVVDIVDTfrlqeqpafdkKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Flexible Loop (DISEMBL)
mlvyqdlltgdellsdsfpYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddQAVKVVDIVDTfrlqeqpafdkkqfVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Low Complexity Region (SEG)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSaegadedegvddqavKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Disordered region (IsUnstruct)
**VYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGA***************QAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLL********
Disordered Region (DISOPRED)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGAN***************AVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT************KNIEGATKFLLSKLSDLQL
Disordered Region (DISEMBL)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANP**********VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Disordered Region (DISPRO)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGAN*************DQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q9ZSW9	168	Translationally-controlle	N/A	no	1.0	0.773	0.961	7e-67
Q5J907	168	Translationally-controlle	N/A	no	1.0	0.773	0.884	1e-62
O03992	170	Translationally-controlle	N/A	no	1.0	0.764	0.871	4e-60
P43349	168	Translationally-controlle	N/A	no	1.0	0.773	0.869	4e-60
Q6DUX3	168	Translationally-controlle	N/A	no	1.0	0.773	0.853	1e-59
Q944T2	168	Translationally-controlle	no	no	1.0	0.773	0.861	1e-59
Q2PS27	168	Translationally-controlle	N/A	no	1.0	0.773	0.846	4e-59
Q9XHL7	168	Translationally-controlle	N/A	no	1.0	0.773	0.815	3e-58
P50906	167	Translationally-controlle	N/A	no	0.992	0.772	0.823	3e-56
Q9M5G3	168	Translationally-controlle	N/A	no	1.0	0.773	0.8	6e-56

>sp|Q9ZSW9|TCTP_HEVBR Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1

 Score =  251 bits (642), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 125/130 (96%), Positives = 126/130 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Involved in calcium binding and microtubule stabilization.
Hevea brasiliensis (taxid: 3981)

>sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1

 Score =  237 bits (605), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 115/130 (88%), Positives = 124/130 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Involved in calcium binding and microtubule stabilization.

Elaeis guineensis var. tenera (taxid: 51953)

>sp|O03992|TCTP_FRAAN Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 115/132 (87%), Positives = 123/132 (93%), Gaps = 2/132 (1%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADED--E 58
           MLVYQDLL+GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPSAEGAD D  E
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADE 60

Query: 59  GVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT 118
           GVDDQ VKVVDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGAT
Sbjct: 61  GVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGAT 120

Query: 119 KFLLSKLSDLQL 130
           KFLLSKLSDLQ 
Sbjct: 121 KFLLSKLSDLQF 132

Involved in calcium binding and microtubule stabilization.

Fragaria ananassa (taxid: 3747)

>sp|P43349|TCTP_SOLTU Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 113/130 (86%), Positives = 119/130 (91%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTY+KR+IK LTPKL  E QE FKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKL D Q 
Sbjct: 121 LLSKLKDFQF 130

Involved in calcium binding and microtubule stabilization.

Solanum tuberosum (taxid: 4113)

>sp|Q6DUX3|TCTP_SOLLC Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1

 Score =  228 bits (580), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 119/130 (91%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAV+VVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E QE FKKNIE ATKF
Sbjct: 61  DDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKF 120

Query: 121 LLSKLSDLQL 130
           LL K+ DLQ 
Sbjct: 121 LLQKIKDLQF 130

Involved in calcium binding and microtubule stabilization.

Solanum lycopersicum (taxid: 4081)

>sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1

 Score =  228 bits (580), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 120/130 (92%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DD AVKVVDIVDTFRLQEQPAFDKKQFVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+
Sbjct: 61  DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120

Query: 121 LLSKLSDLQL 130
           LLSK+ D Q 
Sbjct: 121 LLSKIKDFQF 130

Involved in calcium binding and microtubule stabilization.

Glycine max (taxid: 3847)

>sp|Q2PS27|TCTP_CUCMA Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1

 Score =  226 bits (575), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 118/130 (90%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LL KL D + 
Sbjct: 121 LLPKLKDFRF 130

Involved in calcium binding and microtubule stabilization.

Cucurbita maxima (taxid: 3661)

>sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1

 Score =  223 bits (568), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/130 (81%), Positives = 120/130 (92%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLL+GDEL SDSF Y E+ NG+LWEV+GKWVVQGAVDV+IGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQA+KVVDIVDTFRLQEQP+FDKKQFV YMK++IK LTPKL  E++E+FK NI+GATK+
Sbjct: 61  DDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKY 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Involved in calcium binding and microtubule stabilization.

Nicotiana tabacum (taxid: 4097)

>sp|P50906|TCTP_PEA Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2

 Score =  216 bits (550), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/130 (82%), Positives = 118/130 (90%), Gaps = 1/130 (0%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDS+PYKEIENG+LWEVEGKWVV+GAVDV+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGG-EDEGV 59

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DD AVKVVDIVD FRLQEQP FDKKQF+ ++K++IKLLTPKL  E+QE FKKNIEGATK+
Sbjct: 60  DDTAVKVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKY 119

Query: 121 LLSKLSDLQL 130
           LL KL DLQ 
Sbjct: 120 LLGKLKDLQF 129

Involved in calcium binding and microtubule stabilization.

Pisum sativum (taxid: 3888)

>sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2

 Score =  215 bits (548), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/130 (80%), Positives = 115/130 (88%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL  E  + FKKN+E ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLSKLSDLQL 130
           LLSKL DLQ 
Sbjct: 121 LLSKLKDLQF 130

Involved in calcium binding and microtubule stabilization.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
334854632	168	translationally controlled tumor protein	1.0	0.773	0.961	5e-65
9979196	168	RecName: Full=Translationally-controlled	1.0	0.773	0.961	5e-65
84314025	168	translationally controlled tumor protein	1.0	0.773	0.946	1e-63
386278572	168	translationally controlled tumor protein	1.0	0.773	0.938	1e-63
349891716	168	translationally controlled tumor protein	1.0	0.773	0.907	6e-62
115187479	168	translationally controlled tumor-like pr	1.0	0.773	0.9	5e-61
255551769	168	Translationally-controlled tumor protein	1.0	0.773	0.9	9e-61
192912974	168	translationally controlled tumor protein	1.0	0.773	0.884	9e-61
75222628	168	RecName: Full=Translationally-controlled	1.0	0.773	0.884	1e-60
449435639	168	PREDICTED: translationally-controlled tu	1.0	0.773	0.861	7e-60

>gi|334854632|gb|AEH05972.1| translationally controlled tumor protein [Hevea brasiliensis] gi|392514569|gb|AFM77714.1| TCTP.1 [Hevea brasiliensis]

 Score =  251 bits (642), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 125/130 (96%), Positives = 126/130 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9979196|sp|Q9ZSW9.1|TCTP_HEVBR RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|4193388|gb|AAD10032.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  251 bits (642), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 125/130 (96%), Positives = 126/130 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84314025|gb|ABC55649.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/130 (94%), Positives = 124/130 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NGILWEV GKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVVGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTP L EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPMLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|386278572|gb|AFJ04518.1| translationally controlled tumor protein [Vernicia fordii]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 122/130 (93%), Positives = 125/130 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLL+GDELLSDSFPYKEI NG+LWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIHNGMLWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT KL EE+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTAKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Vernicia fordii

Species: Vernicia fordii

Genus: Vernicia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349891716|gb|AEQ20639.1| translationally controlled tumor protein [Hevea brasiliensis]

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 118/130 (90%), Positives = 125/130 (96%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENG+LWEVEGKWVVQGA+DVDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTPKLEPEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKL DLQ 
Sbjct: 121 LLSKLIDLQF 130

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115187479|gb|ABI84255.1| translationally controlled tumor-like protein [Arachis hypogaea]

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 117/130 (90%), Positives = 123/130 (94%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV+QGA++VDIGANPSAEG +EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVIQGAINVDIGANPSAEGGEEDESV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLT KL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTAKLEPEQQEHFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551769|ref|XP_002516930.1| Translationally-controlled tumor protein, putative [Ricinus communis] gi|223544018|gb|EEF45544.1| Translationally-controlled tumor protein, putative [Ricinus communis]

 Score =  237 bits (605), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 117/130 (90%), Positives = 123/130 (94%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGA+DVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAIDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP FDKKQFVT++KR+IKL+TPKL +E QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFIKRYIKLVTPKLDQETQEHFKKNIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192912974|gb|ACF06595.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  237 bits (605), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 115/130 (88%), Positives = 124/130 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75222628|sp|Q5J907.1|TCTP_ELAGV RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP gi|36963062|gb|AAQ87663.1| translationally controlled tumor protein [Elaeis guineensis] gi|306450591|gb|ADM88549.1| translationally controlled tumor protein [Elaeis guineensis]

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 115/130 (88%), Positives = 124/130 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPSAEG +EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKLSDLQL 130
           LLSKLSDLQ 
Sbjct: 121 LLSKLSDLQF 130

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435639|ref|XP_004135602.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus] gi|449525492|ref|XP_004169751.1| PREDICTED: translationally-controlled tumor protein homolog [Cucumis sativus]

 Score =  234 bits (598), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 124/130 (95%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
           ML+YQDLLTGDELLSDSFPY EIENG+LWEVEGKWVVQGA+DVDIGANPSAEGADEDEGV
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP+FDKKQF+TYMKR+IKLLTPKL EE+QE+F+K+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSFDKKQFITYMKRYIKLLTPKLDEEKQELFRKHIPEATKF 120

Query: 121 LLSKLSDLQL 130
           L+SK+ DLQ 
Sbjct: 121 LISKIDDLQF 130

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:2089378	168	TCTP "translationally controll	0.992	0.767	0.744	8.8e-47
TAIR|locus:2078052	168	AT3G05540 [Arabidopsis thalian	0.984	0.761	0.713	5.6e-45
POMBASE|SPAC1F12.02c	168	SPAC1F12.02c "translationally	0.938	0.726	0.371	4.7e-16
ZFIN|ZDB-GENE-990603-10	176	tpt1 "tumor protein, translati	0.969	0.715	0.348	9.8e-16
SGD|S000001539	167	TMA19 "Protein that associates	0.9	0.700	0.363	6.9e-15
CGD|CAL0003369	167	TMA19 [Candida albicans (taxid	0.946	0.736	0.353	1.8e-14
UNIPROTKB|Q5A860	167	TMA19 "Translationally-control	0.946	0.736	0.353	1.8e-14
UNIPROTKB|Q6XIN1	172	Tctp "Translationally-controll	0.969	0.732	0.328	2.3e-14
FB|FBgn0037874	172	Tctp "Translationally controll	0.969	0.732	0.328	6.2e-14
DICTYBASE|DDB_G0282853	174	DDB_G0282853 "TCTP family prot	0.969	0.724	0.335	1.3e-13

TAIR|locus:2089378 TCTP "translationally controlled tumor protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 96/129 (74%), Positives = 104/129 (80%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS          
Sbjct:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
                  KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKF
Sbjct:    61 DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query:   121 LLSKLSDLQ 129
             LL +LSD Q
Sbjct:   121 LLPRLSDFQ 129

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0009860 "pollen tube growth" evidence=IMP

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048527 "lateral root development" evidence=IMP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0090406 "pollen tube" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007067 "mitosis" evidence=RCA

GO:0009734 "auxin mediated signaling pathway" evidence=RCA

GO:0008017 "microtubule binding" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0031117 "positive regulation of microtubule depolymerization" evidence=IMP

GO:0090333 "regulation of stomatal closure" evidence=IMP

TAIR|locus:2078052 AT3G05540 [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 92/129 (71%), Positives = 104/129 (80%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             MLVYQD+LTGDELLSDSFPYKEIENG+LWEVEGKWVV+GA+D DIGANP           
Sbjct:     1 MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGGEDEGVD 60

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
                  KVVDI+DTFRLQEQP+FDKKQFV +MKR+IK L+PKL  E QE+FKK+IE ATKF
Sbjct:    61 DQAV-KVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 119

Query:   121 LLSKLSDLQ 129
             L+SKL D Q
Sbjct:   120 LMSKLKDFQ 128

GO:0005737 "cytoplasm" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

POMBASE|SPAC1F12.02c SPAC1F12.02c "translationally controlled tumor protein homolog (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 49/132 (37%), Positives = 80/132 (60%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVV--QGAVDVDIGANPSXXXXXXXX 58
             ML+Y+D+++GDEL+SD++  KE+++ I++E + + V   QG  DVDIGANPS        
Sbjct:     1 MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGG-DVDIGANPSAEDAEENA 58

Query:    59 XXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  
Sbjct:    59 EEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAI 115

Query:   116 GATKFLLSKLSD 127
             G  K +L+   D
Sbjct:   116 GFVKKILANFKD 127

GO:0002181 "cytoplasmic translation" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006412 "translation" evidence=ISO

ZFIN|ZDB-GENE-990603-10 tpt1 "tumor protein, translationally-controlled 1" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 47/135 (34%), Positives = 71/135 (52%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
             M++Y+D++TGDE+ SD +  KE ENG++ EVEGK + +   D+D   IG N S       
Sbjct:     1 MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEG 60

Query:    58 XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNI 114
                       VDIV   +LQE  ++DKK +  Y+K ++K +  KL E    R + F  N 
Sbjct:    61 CDSTSVSG--VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANA 117

Query:   115 EGATKFLLSKLSDLQ 129
                 K +L  + + Q
Sbjct:   118 PAEVKKILGNIKNFQ 132

GO:0005737 "cytoplasm" evidence=IEA

SGD|S000001539 TMA19 "Protein that associates with ribosomes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 44/121 (36%), Positives = 71/121 (58%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             M++Y+D+ + DELLSD++  K +++ +++E +   V  G  ++DIGANPS          
Sbjct:     1 MIIYKDIFSNDELLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEE 59

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120
                   V ++V +FRLQ Q AFDKK F+TY+K ++K +  KL E   E   K  +GA  +
Sbjct:    60 GAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTY 116

Query:   121 L 121
             +
Sbjct:   117 V 117

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006412 "translation" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005840 "ribosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0002181 "cytoplasmic translation" evidence=IMP

CGD|CAL0003369 TMA19 [Candida albicans (taxid:5476)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 46/130 (35%), Positives = 71/130 (54%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             ML+++D+++GDELLSD++  K ++ G ++E +   V  G  D+DIGANPS          
Sbjct:     1 MLIFEDVISGDELLSDAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALED 59

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGA 117
                   V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K     
Sbjct:    60 GAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAY 116

Query:   118 TKFLLSKLSD 127
              K +L    D
Sbjct:   117 VKKVLGSFKD 126

GO:0003674 "molecular_function" evidence=ND

GO:0005840 "ribosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0002181 "cytoplasmic translation" evidence=IEA

UNIPROTKB|Q5A860 TMA19 "Translationally-controlled tumor protein homolog" [Candida albicans SC5314 (taxid:237561)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 46/130 (35%), Positives = 71/130 (54%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXX 60
             ML+++D+++GDELLSD++  K ++ G ++E +   V  G  D+DIGANPS          
Sbjct:     1 MLIFEDVISGDELLSDAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALED 59

Query:    61 XXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGA 117
                   V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K     
Sbjct:    60 GAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAY 116

Query:   118 TKFLLSKLSD 127
              K +L    D
Sbjct:   117 VKKVLGSFKD 126

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q6XIN1 Tctp "Translationally-controlled tumor protein homolog" [Drosophila yakuba (taxid:7245)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
             M +Y+D++TGDE+ +D++  K ++  +++EV GK + +   D+ + GAN S         
Sbjct:     1 MKIYKDIITGDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTD 59

Query:    60 XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+ 
Sbjct:    60 ITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMN 117

Query:   116 GATKFLLSKLSDLQ 129
              A K +L +  +LQ
Sbjct:   118 KAMKDILGRFKELQ 131

GO:0005509 "calcium ion binding" evidence=ISS

GO:0045298 "tubulin complex" evidence=ISS

FB|FBgn0037874 Tctp "Translationally controlled tumor protein ortholog (H. sapiens)" [Drosophila melanogaster (taxid:7227)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query:     1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
             M +Y+D++TGDE+ +D++  K +++ +++EV GK + +   D+ + GAN S         
Sbjct:     1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTD 59

Query:    60 XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIE 115
                     VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+ 
Sbjct:    60 ITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMN 117

Query:   116 GATKFLLSKLSDLQ 129
              A K +L +  +LQ
Sbjct:   118 KAMKDILGRFKELQ 131

GO:0005737 "cytoplasm" evidence=NAS

GO:0045793 "positive regulation of cell size" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0005088 "Ras guanyl-nucleotide exchange factor activity" evidence=IDA

DICTYBASE|DDB_G0282853 DDB_G0282853 "TCTP family protein 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 45/134 (33%), Positives = 74/134 (55%)

Query:     1 MLVYQDLL--TGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXX 57
             M V++D++  + DEL SD++P  EI NG+++EV+ K V +   V V+ GAN +       
Sbjct:     1 MRVFKDIVGYSHDELCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEED 60

Query:    58 XXXXXXXXK-VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKN 113
                     K V+++VD  RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+
Sbjct:    61 EGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKD 119

Query:   114 IEGATKFLLSKLSD 127
                  K +L K  +
Sbjct:   120 AADFVKSVLGKFDE 133

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35681	TCTP_ORYSJ	No assigned EC number	0.8461	1.0	0.7738	yes	no
O03992	TCTP_FRAAN	No assigned EC number	0.8712	1.0	0.7647	N/A	no
Q8LRM8	TCTP_WHEAT	No assigned EC number	0.7769	1.0	0.7738	N/A	no
Q9ZRX0	TCTP_PSEMZ	No assigned EC number	0.7923	0.9923	0.7724	N/A	no
Q9XHL7	TCTP_TOBAC	No assigned EC number	0.8153	1.0	0.7738	N/A	no
Q9M5I8	TCTP_CUCME	No assigned EC number	0.7692	1.0	0.7738	N/A	no
P28014	TCTP_MEDSA	No assigned EC number	0.8076	0.9923	0.7724	N/A	no
Q8H6A5	TCTP_MAIZE	No assigned EC number	0.7769	0.9923	0.7724	N/A	no
P50906	TCTP_PEA	No assigned EC number	0.8230	0.9923	0.7724	N/A	no
Q2PS27	TCTP_CUCMA	No assigned EC number	0.8461	1.0	0.7738	N/A	no
Q5J907	TCTP_ELAGV	No assigned EC number	0.8846	1.0	0.7738	N/A	no
P31265	TCTP_ARATH	No assigned EC number	0.8076	1.0	0.7738	yes	no
Q9M5G3	TCTP_HORVU	No assigned EC number	0.8	1.0	0.7738	N/A	no
Q9ZSW9	TCTP_HEVBR	No assigned EC number	0.9615	1.0	0.7738	N/A	no
P43349	TCTP_SOLTU	No assigned EC number	0.8692	1.0	0.7738	N/A	no
Q944W6	TCTP_BRAOL	No assigned EC number	0.7692	1.0	0.7738	N/A	no
Q6DUX3	TCTP_SOLLC	No assigned EC number	0.8538	1.0	0.7738	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	130
pfam00838	165	pfam00838, TCTP, Translationally controlled tumour	2e-54
PTZ00151	172	PTZ00151, PTZ00151, translationally controlled tum	4e-22

>gnl|CDD|189736 pfam00838, TCTP, Translationally controlled tumour protein

 Score =  167 bits (426), Expect = 2e-54
 Identities = 72/134 (53%), Positives = 92/134 (68%), Gaps = 8/134 (5%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEG 59
           ML+Y+D  +GDEL SDSFP K + N +++EV+GK V + G  DV IGANPSAEG   +EG
Sbjct: 1   MLIYKDAFSGDELFSDSFPMK-LVNDLVYEVDGKMVTRTGGDDVLIGANPSAEGG--EEG 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEG 116
           VD+   +VVDIV  FRLQE  +FDKK F TY+K ++K +  KL EE  E   +FKKNI+G
Sbjct: 58  VDETVERVVDIVLNFRLQET-SFDKKSFKTYIKGYMKAVKAKLQEENPERVSLFKKNIQG 116

Query: 117 ATKFLLSKLSDLQL 130
             K LL+K  D Q 
Sbjct: 117 WVKSLLAKFKDYQF 130

Length = 165

>gnl|CDD|173440 PTZ00151, PTZ00151, translationally controlled tumor-like protein; Provisional

 Score = 85.6 bits (212), Expect = 4e-22
 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 12/137 (8%)

Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ TGDE+ SDS+    P+   E + I +EV+ K V++G  D  I  N S EG  
Sbjct: 1   MKVYKDVFTGDEVCSDSYKQLDPFGNAEFSEIAFEVKSKKVIKGNEDYGIADN-SEEG-- 57

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
           + EGVD     V+DIVD F+LQ  P F KK++ TY+K++++ +   L E   +R E FK 
Sbjct: 58  DVEGVDADVETVIDIVDAFKLQSTP-FTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKT 116

Query: 113 NIEGATKFLLSKLSDLQ 129
           N +   K +L    D +
Sbjct: 117 NAQPFVKHILENFDDFE 133

Length = 172

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PTZ00151	172	translationally controlled tumor-like protein; Pro	100.0
PF00838	165	TCTP: Translationally controlled tumour protein; I	100.0
KOG1727	169	consensus Microtubule-binding protein (translation	100.0

>PTZ00151 translationally controlled tumor-like protein; Provisional

Probab=100.00  E-value=1.7e-55  Score=336.60  Aligned_cols=125  Identities=38%  Similarity=0.635  Sum_probs=117.4

Q ss_pred             CeEeeecCCCCeeeccCCCce------eeeCCEEEEEEEEEEEeCCcccccCCCCCCCCCCCCcCcccceeEeceeeecc
Q 032977            1 MLVYQDLLTGDELLSDSFPYK------EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTF   74 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~------~v~~~~~yeV~~k~vt~~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~   74 (130)
                      ||||||||||||||||+||++      ++ +|++|||+||+|+++.++  ||+||||||++ +|++++++++|||||+||
T Consensus         1 MiIykDi~tgDEm~SDsyk~~~~~~~~~~-~~~~yEV~~k~v~~~~~d--ig~n~saee~~-~e~~d~~~~~vvDIV~~f   76 (172)
T PTZ00151          1 MKVYKDVFTGDEVCSDSYKQLDPFGNAEF-SEIAFEVKSKKVIKGNED--YGIADNSEEGD-VEGVDADVETVIDIVDAF   76 (172)
T ss_pred             CeEEEecccCCeeeccccccccccccccc-CCEEEEEeeEEEEECCcc--ccCCCCccccc-ccccccccEEEEEeeecC
Confidence            999999999999999999998      56 799999999999998765  69999999743 578999999999999999


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           75 RLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        75 ~Lqe~~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      ||| +|+|||++|++|||+|||+|++||++++|+|++.|+++|+   |+||+|||||||
T Consensus        77 rLq-et~f~Kk~Y~~yiK~YmK~vk~~L~e~~pe~v~~Fk~~a~~~vK~il~~Fkd~qF  134 (172)
T PTZ00151         77 KLQ-STPFTKKEYSTYIKKYMQRIKAYLEEKNPDRVEKFKTNAQPFVKHILENFDDFEF  134 (172)
T ss_pred             cce-ecCCCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            999 4799999999999999999999999999999999999998   889999999998

>PF00838 TCTP: Translationally controlled tumour protein; InterPro: IPR018105 Mammalian translationally controlled tumour protein (TCTP) (or P23) is a protein which has been found to be preferentially synthesised in cells during the early growth phase of some types of tumour [, ], but which is also expressed in normal cells

Probab=100.00  E-value=3.2e-56  Score=339.25  Aligned_cols=126  Identities=44%  Similarity=0.749  Sum_probs=114.3

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEe-CCcccccCCCCCCCCCCCCcCcccceeEeceeeeccccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~-~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lqe~   79 (130)
                      ||||||+|||||||||+||++++ +|+||||+||+|++ +.++.+||||||||+++  +++++++++|||||+|||||| 
T Consensus         1 MiiykDiisgdEm~SD~y~~~~~-~~~~yeV~gk~vt~~~~d~~liG~N~SaE~~~--e~~~~~~~~viDiV~~~~L~e-   76 (165)
T PF00838_consen    1 MIIYKDIISGDEMFSDSYKIELV-DDVFYEVEGKMVTRTGIDDSLIGANPSAEEGE--EGTDDSVETVIDIVDNHRLQE-   76 (165)
T ss_dssp             EEEEEETTTTTEEEETTSCEEEG-CTTEEEEE--EEEEETTB-TTTSSS--SSSSS--SSSCCCECEEEHHHHHTTEEE-
T ss_pred             CeEEeccCCCCEecccCcccccc-CCEEEEEEEEEEeeccccccccccCcccccCc--cCCCCccEEccceeeccccee-
Confidence            99999999999999999999666 79999999999999 56778899999999764  689999999999999999995 


Q ss_pred             CCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           80 PAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        80 ~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      |+|||++|++|||+|||+|++||++++|+|+++|+++|+   |+||+|||||||
T Consensus        77 t~f~Kk~y~~yiK~Y~K~i~~kL~e~~~erv~~F~~~a~~~vK~il~nfkd~qF  130 (165)
T PF00838_consen   77 TSFDKKSYKAYIKDYMKKIKEKLEENGPERVKAFKKGAQEFVKKILANFKDYQF  130 (165)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHTGGGCEE
T ss_pred             ecccHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHhHHHHHHHHhhcccccc
Confidence            799999999999999999999999999999999999998   899999999998

The physiological function of TCTP is still not known. It was first identified as a histamine-releasing factor, acting in IgE +-dependent allergic reactions. In addition, TCTP has been shown to bind to tubulin in the cytoskeleton, has a high affinity for calcium, is the binding target for the antimalarial compound artemisinin, and is induced in vitamin D-dependent apoptosis. TCTP production is thought to be controlled at the translational as well as the transcriptional level []. TCTP is a hydrophilic protein of 18 to 20 kD. TCTPs do not share significant sequence similarity with any other class of proteins. Recently, the structure of TCTP was determined and exhibited significant structural similarity to the human protein Mss4, which is a guanine nucleotide-free chaperone of the Rab protein []. Close homologues have been found in plants [], earthworm [], Caenorhabditis elegans (F52H2.11), Hydra, Saccharomyces cerevisiae (YKL056c) [] and Schizosaccharomyces pombe (SpAC1F12.02c).; PDB: 2KWB_A 2LOY_A 1TXJ_A 1H6Q_A 1H7Y_A 3P3K_A 1YZ1_C 3EBM_D 2HR9_A.

>KOG1727 consensus Microtubule-binding protein (translationally controlled tumor protein) [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=100.00  E-value=1.2e-47  Score=290.33  Aligned_cols=128  Identities=51%  Similarity=0.820  Sum_probs=111.6

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEeCCcc-cccCCCCCCCCCCCCcCcccceeEeceeeeccccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVD-VDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~~~~~-~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lqe~   79 (130)
                      |+||+|+||||||+||+||+++++ ++||||+||+|||++++ .+||+|||||++.|++|+++++++|+|||+||||||+
T Consensus         1 mliy~di~t~del~sd~~~~k~i~-~l~~EvegK~vsr~~~D~~lig~NpSaE~~~edegte~~~~~~vdiV~~~rLqEq   79 (169)
T KOG1727|consen    1 MLIYKDIITGDELLSDSYPMKEVD-DLCYEVEGKMVTRTNGDDSLIGANPSAEEGAEDEGTEETVETVVDIVLNFRLQEQ   79 (169)
T ss_pred             CceeeccccCchhcccchhHHHHH-hhhheeeceeccccCccchhcccCccccccccCCcchhheeeeeeeeeeeccccc
Confidence            899999999999999999999994 69999999999997554 4699999999987889999999999999999999976


Q ss_pred             CCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHHHHHH-ccCCCCCC
Q 032977           80 PAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLL-SKLSDLQL  130 (130)
Q Consensus        80 ~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~k~il-~nFkd~qF  130 (130)
                      ++| |++|++|||+|||+|++||+|.+.+.++.-+++|.+.++ +|||||||
T Consensus        80 ~~~-ke~~k~yik~ymK~v~~klee~~~~~f~k~~~~a~q~~h~anFKnyqF  130 (169)
T KOG1727|consen   80 SPF-KERFKAYIKGYMKAVKAKLEEEDVDVFKKNIQGAEKIKHIANFKNYQF  130 (169)
T ss_pred             chH-HHHHHHHHHHHHHHhhhhhhhhhhhhhhhccchHHHHHHhhcccccee
Confidence            555 999999999999999999999444445555555554433 69999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	130
1h6q_A	168	Translationally Controlled Tumor-Associated Protein		7e-15
1yz1_A	174	Crystal Structure Of Human Translationally Controll		4e-12
2hr9_A	180	Solution Structure Of Human Translationally Control		4e-12
3ebm_A	180	Crystal Structure Of Human Translationally Controll		4e-11
2kwb_A	189	Minimal Constraint Solution Nmr Structure Of Transl		9e-11
3p3k_A	183	The Crystal Structure Of Translationally Controlled		3e-08
1txj_A	171	Crystal Structure Of Translationally Controlled Tum		2e-06

>pdb|1H6Q|A Chain A, Translationally Controlled Tumor-Associated Protein P23fyp From Schizosaccharomyces Pombe Length = 168

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 8/131 (6%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXX 59
           ML+Y+D+++GDEL+SD++  KE+++ I++E + + V V+   DVDIGANPS         
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAE 59
Query: 60  XXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
                  V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 60  EGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116
Query: 117 ATKFLLSKLSD 127
             K +L+   D
Sbjct: 117 FVKKILANFKD 127

>pdb|1YZ1|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein Length = 174

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 3   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 62
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                     VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 63  GTESTVITG-VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 120
Query: 118 T---KFLLSKLSDLQL 130
               K +L+   + Q 
Sbjct: 121 AEQIKHILANFKNYQF 136

>pdb|2HR9|A Chain A, Solution Structure Of Human Translationally Controlled Tumor Protein Length = 180

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                     VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 61  GTESTVITG-VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118
Query: 118 T---KFLLSKLSDLQL 130
               K +L+   + Q 
Sbjct: 119 AEQIKHILANFKNYQF 134

>pdb|3EBM|A Chain A, Crystal Structure Of Human Translationally Controlled Tumour Associated Protein (Htctp) Mutant E12v Length = 180

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXX 57
           M++Y+DL++ D + SD +  +EI +G+  EVEGK V +   ++D   IG N S       
Sbjct: 1   MIIYRDLISHDVMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 58  XXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
                     VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 61  GTESTVITG-VDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118
Query: 118 T---KFLLSKLSDLQL 130
               K +L+   + Q 
Sbjct: 119 AEQIKHILANFKNYQF 134

>pdb|2KWB|A Chain A, Minimal Constraint Solution Nmr Structure Of Translationally Controlled Tumor Protein (Tctp) From C.Elegans, Northeast S Genomics Consortium Target Wr73 Length = 189

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXX 59
           ML+Y+D+ T DEL SDSFP K +++ +++E +GK VV+   ++ + G+NPS         
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDD-LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDG 59
Query: 60  XXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQ-----EIFKKN 113
                 + +DIV   +L E   + D   F  Y+K+F+K +   + +  +     + FKK 
Sbjct: 60  SDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKK 119
Query: 114 IEGATKFLLSK 124
           I+G    LL+K
Sbjct: 120 IQGWVVSLLAK 130

>pdb|3P3K|A Chain A, The Crystal Structure Of Translationally Controlled Tumor Protein (Tctp) Of Plasmodium Falciparum Length = 183

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXX 55
           M V++D+ T DE+ SDS+    P++  E   I +EV+    ++G  D  I  N       
Sbjct: 5   MKVFKDVFTNDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSE----D 60
Query: 56  XXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
                      V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK 
Sbjct: 61  AVEGMGADVEHVIDIVDSFQLT-STAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKT 119
Query: 113 NIEGATKFLLSKLSDLQL 130
             +   K +L+   D + 
Sbjct: 120 KAQPFIKHILTNFDDFEF 137

>pdb|1TXJ|A Chain A, Crystal Structure Of Translationally Controlled Tumour- Associated Protein (Tctp) From Plasmodium Knowlesi Length = 171

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 1   MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXX 55
           M VY+D+ T DE+ SDS+    P+   +   I +EV+    ++G  D  I  N       
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSE----E 56
Query: 56  XXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
                     +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK 
Sbjct: 57  AVDGMGADVEQVIDIVDSFQLT-STSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115
Query: 113 NIEGATKFLLSKLSDLQL 130
             +   K +L+   D + 
Sbjct: 116 KAQPLIKHILTNFDDFEF 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
1yz1_A	174	Translationally controlled tumor protein; unknown	7e-46
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	4e-42
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	3e-39
1txj_A	171	Translationally controlled tumour-associated prote	2e-37

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A Length = 174

 Score =  145 bits (368), Expect = 7e-46
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADED 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E 
Sbjct: 3   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EG 61

Query: 58  EGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNI 114
           EG +   +  VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E    F    
Sbjct: 62  EGTESTVITGVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 120

Query: 115 EGATKFLLSKLSDLQL 130
               K +L+   + Q 
Sbjct: 121 AEQIKHILANFKNYQF 136

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A Length = 189

 Score =  136 bits (344), Expect = 4e-42
 Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 8/133 (6%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSAEGADEDEG 59
           ML+Y+D+ T DEL SDSFP K + + +++E +GK VV+   ++ + G+NPSAE   ED+G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDG 59

Query: 60  VDDQAVKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSEERQEI-----FKKN 113
            D+   + +DIV   +L E   + D   F  Y+K+F+K +   + +  ++      FKK 
Sbjct: 60  SDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKK 119

Query: 114 IEGATKFLLSKLS 126
           I+G    LL+K  
Sbjct: 120 IQGWVVSLLAKDR 132

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A Length = 168

 Score =  128 bits (324), Expect = 3e-39
 Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 8/133 (6%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEG 59
           ML+Y+D+++GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE    +E 
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAED--AEEN 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
            ++    V ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 58  AEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116

Query: 117 ATKFLLSKLSDLQ 129
             K +L+   D  
Sbjct: 117 FVKKILANFKDYD 129

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A Length = 171

 Score =  123 bits (311), Expect = 2e-37
 Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ T DE+ SDS+  ++         I +EV+    ++G  D  I  N      +
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNSE----E 56

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKK 112
             +G+     +V+DIVD+F+L       KK++  Y+K +++ +   L E++ +   +FK 
Sbjct: 57  AVDGMGADVEQVIDIVDSFQLTSTS-LSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115

Query: 113 NIEGATKFLLSKLSDLQ 129
             +   K +L+   D +
Sbjct: 116 KAQPLIKHILTNFDDFE 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
1h6q_A	168	TCTP, P23FYP, translationally controlled tumor pro	100.0
1yz1_A	174	Translationally controlled tumor protein; unknown	100.0
2kwb_A	189	TCTP, translationally-controlled tumor protein hom	100.0
1txj_A	171	Translationally controlled tumour-associated prote	100.0

>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A

Probab=100.00  E-value=6.9e-60  Score=358.74  Aligned_cols=126  Identities=37%  Similarity=0.658  Sum_probs=121.8

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEe-CCcccccCCCCCCCCCCCCcCcccceeEeceeeeccccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~-~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lqe~   79 (130)
                      |||||||||||||||||||++++ +|++|||+||+|+| ++++++|||||||||+  +||+++++++|||||+|||||| 
T Consensus         1 MiiykDiitgDEm~SDsy~~k~v-d~~~yEV~gk~v~~~~~~didiGaN~SaE~~--~eg~d~~~~~vvdiV~~~rLqe-   76 (168)
T 1h6q_A            1 MLLYKDVISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDA--EENAEEGTETVNNLVYSFRLSP-   76 (168)
T ss_dssp             CCEEECTTTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSC--SCSSCCCEEEEEHHHHHTTCEE-
T ss_pred             CeEEeecCCCCEEeecCcccEee-CCEEEEEeeEEEEEccCCccccccCcccccc--ccccCCceEEeeeeeEeccccc-
Confidence            99999999999999999999999 79999999999999 9999999999999975  5689999999999999999995 


Q ss_pred             CCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           80 PAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        80 ~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      |+|||++|++|||+|||+|++||++++|+|+++|+++|+   |+||+|||||||
T Consensus        77 t~fdKk~y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qF  130 (168)
T 1h6q_A           77 TSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDF  130 (168)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccE
Confidence            799999999999999999999999999999999999998   889999999998

>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A

Probab=100.00  E-value=1.6e-59  Score=358.56  Aligned_cols=128  Identities=40%  Similarity=0.685  Sum_probs=100.5

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEeCCcccc---cCCCCCCCCCCCCcCcccceeEeceeeeccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQ   77 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~~~~~~d---iG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lq   77 (130)
                      |||||||||||||||||||++++.+|++|||+||+|+|++++++   |||||||||+ ++||+++++++|||||+|||||
T Consensus         3 MiiykDiitgDEm~SDsy~~~~~~dg~~yEV~gk~v~~~~g~idd~liGaN~SaE~~-~~eg~d~~~~~~vdiV~~~rLq   81 (174)
T 1yz1_A            3 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVITGVDIVMNHHLQ   81 (174)
T ss_dssp             CEEEEETTTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCE
T ss_pred             eEEEeecCCCCEEeecCcccEEccCCEEEEEeeEEEEecCCCccccccccCcccccc-cccccCcceEEcceeEeecccc
Confidence            99999999999999999999999889999999999999999887   9999999975 3578999999999999999999


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           78 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        78 e~~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      | |+|||++|++|||+|||+|++||++++|+|+++|+++|+   |+||+|||||||
T Consensus        82 e-t~fdKk~y~~yiK~YmK~v~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qF  136 (174)
T 1yz1_A           82 E-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQF  136 (174)
T ss_dssp             E-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEE
T ss_pred             c-cCcCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCcCccE
Confidence            5 799999999999999999999999999999999999998   889999999998

>2kwb_A TCTP, translationally-controlled tumor protein homolog; structural genomics, northeast structural genomics consortiu PSI-2; NMR {Caenorhabditis elegans} PDB: 2loy_A

Probab=100.00  E-value=5e-58  Score=353.86  Aligned_cols=128  Identities=34%  Similarity=0.581  Sum_probs=122.5

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEeCCcccc-cCCCCCCCCCCCCcCcccceeEeceeeeccccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD-IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~~~~~~d-iG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lqe~   79 (130)
                      |||||||||||||||||||++++ +|++|||+||+|+|++++++ |||||||||++++||+++++++|||||+|||||| 
T Consensus         1 MiIYkDiitgDEmfSDsy~~k~v-d~~~yEV~gK~v~~~~gdidl~GaN~SaE~~~~~eg~d~~~~~vvDIV~n~rLqe-   78 (189)
T 2kwb_A            1 MLIYKDIFTDDELSSDSFPMKLV-DDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVE-   78 (189)
T ss_dssp             CEEEEESSCTTTCEEECCCCEEE-TTTEEEEECCEECCBTTBCCCCCCSCCCSSCCSSCCCGGGCSSEEHHHHTTTEEE-
T ss_pred             CeEEeecCCCCEEeecCccCEee-CCEEEEEeeEEEEECCccccccccCccccccccccccCCccEEcceeEEecceee-
Confidence            99999999999999999999999 79999999999999999998 9999999985567899999999999999999995 


Q ss_pred             CCC--CHHHHHHHHHHHHHHHhHhhhhhcHHH--HHHhHHhHH---HHHHc--cCCCCCC
Q 032977           80 PAF--DKKQFVTYMKRFIKLLTPKLSEERQEI--FKKNIEGAT---KFLLS--KLSDLQL  130 (130)
Q Consensus        80 ~~f--~Kk~y~~yiK~YmK~vk~kL~e~~~e~--vk~f~~~a~---k~il~--nFkd~qF  130 (130)
                      |+|  ||++|++|||+|||+|++||++++|+|  +++|+++|+   |+||+  |||||||
T Consensus        79 t~f~~dKk~y~~yiK~YmK~v~~kLee~~pe~e~v~~Fk~~a~~~vK~iL~k~~Fkd~qF  138 (189)
T 2kwb_A           79 MNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAF  138 (189)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCHHHHTTCEE
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHhccccccCccE
Confidence            799  999999999999999999999999988  999999998   88999  9999998

>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A

Probab=100.00  E-value=1.1e-57  Score=347.54  Aligned_cols=124  Identities=30%  Similarity=0.551  Sum_probs=105.2

Q ss_pred             CeEeeecCCCCeeeccCC----Cce--eeeCCEEEEEEEEEEEeCCcccccCCCCCCCCCCCCcCcccceeEeceeeecc
Q 032977            1 MLVYQDLLTGDELLSDSF----PYK--EIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTF   74 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y----~~~--~v~~~~~yeV~~k~vt~~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~   74 (130)
                      ||||||||||||||||||    |++  ++ +|++|||+||+|+|++++++|||||||||+  +||++  +++|||||+||
T Consensus         1 MiIykDiitgDEm~SDsy~~~~~~k~~e~-~~~~yEV~gk~v~~~~~~idiGaN~saE~~--~e~~d--~~~vvdIV~~~   75 (171)
T 1txj_A            1 MKVYKDVFTNDEVCSDSYNQEDPFGIADF-REIAFEVKSNKRIKGNDDYGIADNSEEAVD--GMGAD--VEQVIDIVDSF   75 (171)
T ss_dssp             CEEEEETTTCCEEEETTSCCBCGGGCGGG-TTTEEEEECCEEESCC----------------CCCCS--SCEEEHHHHHH
T ss_pred             CeEEeecCcCCEEEeccccccCCcccccc-CCEEEEEEeEEEEECCCcccccCCcccccc--ccCcc--eeecceEEEec
Confidence            999999999999999999    999  88 689999999999999999999999999975  45776  89999999999


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           75 RLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        75 ~Lqe~~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      |||| |+|||++|++|||+|||+|++||++++|+|+++|+++|+   |+||+|||||||
T Consensus        76 rL~e-t~f~Kk~y~~yiK~YmK~i~~kLee~~pe~v~~Fk~~a~~~vK~il~~fkd~qF  133 (171)
T 1txj_A           76 QLTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEF  133 (171)
T ss_dssp             TCEE-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEE
T ss_pred             ceee-cCCCHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhCcCccE
Confidence            9995 799999999999999999999999999999999999998   889999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	130
d1yz1a1	172	b.88.1.2 (A:1-172) Translationally controlled tumo	4e-49
d1h6qa_	168	b.88.1.2 (A:) Translationally controlled tumor pro	4e-48
d1txja_	171	b.88.1.2 (A:) Translationally controlled tumor pro	1e-41

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (386), Expect = 4e-49
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADED 57
           M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N SAEG  E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EG 59

Query: 58  EGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGA 117
           EG +   +  VDIV    LQE   F K+ +  Y+K ++K +  KL E+R E  K  + GA
Sbjct: 60  EGTESTVITGVDIVMNHHLQETS-FTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA 118

Query: 118 T---KFLLSKLSDLQ 129
               K +L+   + Q
Sbjct: 119 AEQIKHILANFKNYQ 133

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 168

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  150 bits (380), Expect = 4e-48
 Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 8/133 (6%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSAEGADEDEG 59
           ML+Y+D+++GDEL+SD++  KE++  I++E + + V V+   DVDIGANPSAE A  +E 
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVD-DIVYEADCQMVTVKQGGDVDIGANPSAEDA--EEN 57

Query: 60  VDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEG 116
            ++    V ++V +FRL     FDKK +++Y+K ++K +  +L E   ER  +F+KN  G
Sbjct: 58  AEEGTETVNNLVYSFRLSPTS-FDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIG 116

Query: 117 ATKFLLSKLSDLQ 129
             K +L+   D  
Sbjct: 117 FVKKILANFKDYD 129

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]} Length = 171

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

 Score =  133 bits (336), Expect = 1e-41
 Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 13/137 (9%)

Query: 1   MLVYQDLLTGDELLSDSFPYKEI-----ENGILWEVEGKWVVQGAVDVDIGANPSAEGAD 55
           M VY+D+ T DE+ SDS+  ++         I +EV+    ++G  D  I  N      +
Sbjct: 1   MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDYGIADNS----EE 56

Query: 56  EDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKK 112
             +G+     +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK 
Sbjct: 57  AVDGMGADVEQVIDIVDSFQLTS-TSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKT 115

Query: 113 NIEGATKFLLSKLSDLQ 129
             +   K +L+   D +
Sbjct: 116 KAQPLIKHILTNFDDFE 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d1h6qa_	168	Translationally controlled tumor protein TCTP (his	100.0
d1yz1a1	172	Translationally controlled tumor protein TCTP (his	100.0
d1txja_	171	Translationally controlled tumor protein TCTP (his	100.0

>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.2e-57  Score=344.97  Aligned_cols=126  Identities=37%  Similarity=0.658  Sum_probs=119.2

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEe-CCcccccCCCCCCCCCCCCcCcccceeEeceeeeccccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ-GAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQ   79 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~-~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lqe~   79 (130)
                      ||||||||||||||||+||++++ +|++|||+||+||+ ..++.+||||||||+++  |++++++++|||||+|||||| 
T Consensus         1 MiIYkDiitgDEmfSDsyk~~~v-d~~~yEV~gk~vt~~~~~d~~iGaN~saE~~~--e~~~~~~~~~vDiV~~~rL~e-   76 (168)
T d1h6qa_           1 MLLYKDVISGDELVSDAYDLKEV-DDIVYEADCQMVTVKQGGDVDIGANPSAEDAE--ENAEEGTETVNNLVYSFRLSP-   76 (168)
T ss_dssp             CCEEECTTTTSSCEETTTCEEEC-SSSEEEEECCEEEEECCCCSTTSCCCCCCSCS--CSSCCCEEEEEHHHHHTTCEE-
T ss_pred             CeEEeccCcCCeEeecCccCEEE-cCEEEEEEeEEEEeecCcccccccCccccccc--CCCCCCceEEEEeeecccccc-
Confidence            99999999999999999999999 79999999999997 45677899999999763  588999999999999999995 


Q ss_pred             CCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           80 PAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        80 ~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      |+|||++|++|||+|||+|++||++++|+|++.|+++|+   |+||+|||||||
T Consensus        77 t~f~Kk~y~~yiK~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il~nFkd~qF  130 (168)
T d1h6qa_          77 TSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDF  130 (168)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTTTTCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHhHHHHHHHHHhcCccceE
Confidence            799999999999999999999999999999999999999   889999999998

>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-57  Score=345.64  Aligned_cols=128  Identities=40%  Similarity=0.685  Sum_probs=100.5

Q ss_pred             CeEeeecCCCCeeeccCCCceeeeCCEEEEEEEEEEEeCCcccc---cCCCCCCCCCCCCcCcccceeEeceeeeccccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQ   77 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~~~~~yeV~~k~vt~~~~~~d---iG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~Lq   77 (130)
                      ||||||||||||||||+||++++.||++|||+||+|++..+++|   |||||||||+ ++||+++++++|||||+|||||
T Consensus         1 M~IyKDi~tgDE~~SDsy~~k~~~d~~~yEV~gk~v~~~~g~id~~liGaN~SaE~~-~~eg~~~~~~~~vDiV~~~rL~   79 (172)
T d1yz1a1           1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP-EGEGTESTVITGVDIVMNHHLQ   79 (172)
T ss_dssp             CEEEEETTTCCEEEETTSEEEEEGGGTEEEEECCBCCC-----------------------------CCCBHHHHHTTCE
T ss_pred             CeEEeecCcCCeEeecCcccEecCCCeEEEEEeEEEEEcccccccccccCCcccccc-ccccccccceeccCeEEeeeee
Confidence            99999999999999999999998889999999999999888886   9999999975 5689999999999999999999


Q ss_pred             ccCCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           78 EQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        78 e~~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      | |+|||++|++|||+|||+|++||++++|+||++|+++|+   |+||+|||||||
T Consensus        80 e-t~f~Kk~y~~yiK~YmK~v~~~L~e~~~e~v~~F~~~a~~~vK~il~~fkd~qF  134 (172)
T d1yz1a1          80 E-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQF  134 (172)
T ss_dssp             E-ECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEE
T ss_pred             e-cCCCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhHHHHHHHHhccccceE
Confidence            5 799999999999999999999999999999999999998   889999999998

>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}

class: All beta proteins
fold: Mss4-like
superfamily: Mss4-like
family: Translationally controlled tumor protein TCTP (histamine-releasing factor)
domain: Translationally controlled tumor protein TCTP (histamine-releasing factor)
species: Plasmodium knowlesi [TaxId: 5850]

Probab=100.00  E-value=4.3e-52  Score=315.13  Aligned_cols=125  Identities=29%  Similarity=0.509  Sum_probs=105.0

Q ss_pred             CeEeeecCCCCeeeccCCCceeee-----CCEEEEEEEEEEEeCCcccccCCCCCCCCCCCCcCcccceeEeceeeeccc
Q 032977            1 MLVYQDLLTGDELLSDSFPYKEIE-----NGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFR   75 (130)
Q Consensus         1 MiIykDiisgdEm~SD~y~~~~v~-----~~~~yeV~~k~vt~~~~~~diG~N~SaE~~~e~eg~~~~~~~~iDiV~~~~   75 (130)
                      ||||||||||||||||+||++++.     .+++|||+|++++++.+++  |+|||||++  +||+++++++|||||+|||
T Consensus         1 MiIYkDiisgDEmfSDsyk~~~~~~~~d~~~~~~ev~~~~~~~~~~d~--~~~~~aee~--~eg~~~~~~~vvDiV~~~r   76 (171)
T d1txja_           1 MKVYKDVFTNDEVCSDSYNQEDPFGIADFREIAFEVKSNKRIKGNDDY--GIADNSEEA--VDGMGADVEQVIDIVDSFQ   76 (171)
T ss_dssp             CEEEEETTTCCEEEETTSCCBCGGGCGGGTTTEEEEECCEEESCC------------------CCCCSSCEEEHHHHHHT
T ss_pred             CeEEeecCcCCeEeeccccccccccccccccEEEEEEEEEEEeccccc--ccCCCcccc--ccccCCcceEeeeeEEeee
Confidence            999999999999999999999752     3689999999999887655  555556654  4578889999999999999


Q ss_pred             ccccCCCCHHHHHHHHHHHHHHHhHhhhhhcHHHHHHhHHhHH---HHHHccCCCCCC
Q 032977           76 LQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQL  130 (130)
Q Consensus        76 Lqe~~~f~Kk~y~~yiK~YmK~vk~kL~e~~~e~vk~f~~~a~---k~il~nFkd~qF  130 (130)
                      || +|+|||++|++|||+|||+|++||++++|+||+.|+++|+   |+||+|||||||
T Consensus        77 Lq-et~f~Kk~y~~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il~nFkd~qF  133 (171)
T d1txja_          77 LT-STSLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEF  133 (171)
T ss_dssp             CE-EECCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHTGGGCEE
T ss_pred             ee-ecCCCHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHhhCccceE
Confidence            99 4899999999999999999999999999999999999999   889999999998