Citrus Sinensis ID: 033003

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKEE
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MALQWLILAYAVAAEAAIAILLtipspkllKNRLVSLVSLIlqpalfivpfagfqLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKEE
Flexible Loop (DISEMBL)
MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKEE
Low Complexity Region (SEG)
MALQWlilayavaaeaaiailltiPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKEE
Disordered region (IsUnstruct)
**LQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRL**********
Disordered Region (DISOPRED)
*ALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCT***C*****DRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQR***********
Disordered Region (DISEMBL)
MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEE********
Disordered Region (DISPRO)
MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKE*
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIYWKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
449439487	129	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.829	6e-58
357488055	129	hypothetical protein MTR_5g048060 [Medic	1.0	1.0	0.806	4e-57
224117998	129	predicted protein [Populus trichocarpa]	1.0	1.0	0.806	5e-57
357499197	129	hypothetical protein MTR_6g071330 [Medic	1.0	1.0	0.798	1e-56
217070942	129	unknown [Medicago truncatula]	1.0	1.0	0.806	2e-56
224125716	129	predicted protein [Populus trichocarpa]	1.0	1.0	0.821	3e-53
255585518	129	conserved hypothetical protein [Ricinus	1.0	1.0	0.821	2e-52
346470577	129	hypothetical protein [Amblyomma maculatu	0.992	0.992	0.742	3e-52
388507660	129	unknown [Lotus japonicus]	1.0	1.0	0.844	9e-52
297847100	129	hypothetical protein ARALYDRAFT_473983 [	1.0	1.0	0.759	1e-50

>gi|449439487|ref|XP_004137517.1| PREDICTED: uncharacterized protein LOC101203379 [Cucumis sativus] gi|449520936|ref|XP_004167488.1| PREDICTED: uncharacterized protein LOC101228810 [Cucumis sativus]

 Score =  228 bits (581), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 107/129 (82%), Positives = 121/129 (93%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW++LAY VA EAAIA+LLT+PSPKLLK R VSL+SLILQPALF+VPF+GFQ+LDIY
Sbjct: 1   MALQWMLLAYTVAVEAAIALLLTVPSPKLLKKRFVSLISLILQPALFVVPFSGFQILDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTSEICTAAERDRYEKSIYKAQRNVILC AACLLYW I+RICKY K+++ LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCIAACLLYWCIYRICKYNKEIESLE 120

Query: 121 EVEKRYKEE 129
           EVEKRYKE+
Sbjct: 121 EVEKRYKEQ 129

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357488055|ref|XP_003614315.1| hypothetical protein MTR_5g048060 [Medicago truncatula] gi|355515650|gb|AES97273.1| hypothetical protein MTR_5g048060 [Medicago truncatula] gi|388498270|gb|AFK37201.1| unknown [Medicago truncatula]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 119/129 (92%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VA EAA+AILLT+PSPKLL+NRL SL+SLILQPALFIVPFAGFQLLDIY
Sbjct: 1   MALQWMILTYVVAIEAAVAILLTLPSPKLLRNRLTSLISLILQPALFIVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTS++CTAAERDRYEK+ YKAQRNVILC +ACLLYWSI+RICK+ KD+Q +E
Sbjct: 61  WKAEHRLMCTSDVCTAAERDRYEKTTYKAQRNVILCISACLLYWSIYRICKFQKDIQSME 120

Query: 121 EVEKRYKEE 129
           EVEKR K +
Sbjct: 121 EVEKRIKSK 129

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117998|ref|XP_002317708.1| predicted protein [Populus trichocarpa] gi|118482296|gb|ABK93075.1| unknown [Populus trichocarpa] gi|222858381|gb|EEE95928.1| predicted protein [Populus trichocarpa]

 Score =  225 bits (573), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 119/129 (92%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VAAEA IA+LLT+PSPKLLK RLVSL+SL+LQPALF+VPFAGFQLLDIY
Sbjct: 1   MALQWMILTYLVAAEAVIAVLLTLPSPKLLKYRLVSLISLVLQPALFVVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK EHRLMCT E CTAAERDRYEKSIYKAQRNVILC +ACLLYW ++R+CK+YK++Q LE
Sbjct: 61  WKMEHRLMCTGETCTAAERDRYEKSIYKAQRNVILCISACLLYWCVYRVCKFYKEIQSLE 120

Query: 121 EVEKRYKEE 129
           EVEKRYK++
Sbjct: 121 EVEKRYKDQ 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357499197|ref|XP_003619887.1| hypothetical protein MTR_6g071330 [Medicago truncatula] gi|355494902|gb|AES76105.1| hypothetical protein MTR_6g071330 [Medicago truncatula]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 103/129 (79%), Positives = 119/129 (92%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VA EAA+AILLT+PSPKLL+NRL SL+SLILQPALFIVPFAGFQLLDIY
Sbjct: 1   MALQWMILTYVVAIEAAVAILLTLPSPKLLRNRLTSLISLILQPALFIVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTS++CTAAERDRYEK+ YKAQRNVILC +ACLLYW+I+RICK+ KD+Q +E
Sbjct: 61  WKAEHRLMCTSDVCTAAERDRYEKTTYKAQRNVILCISACLLYWAIYRICKFQKDIQSME 120

Query: 121 EVEKRYKEE 129
           EVEKR K +
Sbjct: 121 EVEKRIKSK 129

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217070942|gb|ACJ83831.1| unknown [Medicago truncatula]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 118/129 (91%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VA EAA+AILLT+PSPKLL+NRL SL+SLILQPALFIVPFAGFQLLDIY
Sbjct: 1   MALQWMILTYVVAIEAAVAILLTLPSPKLLRNRLTSLISLILQPALFIVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTS++CTAAERDRYEK  YKAQRNVILC +ACLLYWSI+RICK+ KD+Q +E
Sbjct: 61  WKAEHRLMCTSDVCTAAERDRYEKITYKAQRNVILCISACLLYWSIYRICKFQKDIQSME 120

Query: 121 EVEKRYKEE 129
           EVEKR K +
Sbjct: 121 EVEKRIKSK 129

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125716|ref|XP_002329700.1| predicted protein [Populus trichocarpa] gi|222870608|gb|EEF07739.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/129 (82%), Positives = 119/129 (92%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VAAEAAIA LLT+PSPKLLK+RLVSL+SL+LQPALFIVPFAGFQLLDIY
Sbjct: 1   MALQWMILTYVVAAEAAIAALLTLPSPKLLKDRLVSLISLLLQPALFIVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMC  E CTA+ERDRYEKSIYKAQRNVILC +ACLLYW ++RICKYYK++Q LE
Sbjct: 61  WKNEHRLMCAGENCTASERDRYEKSIYKAQRNVILCVSACLLYWCVYRICKYYKEIQSLE 120

Query: 121 EVEKRYKEE 129
           EVEKRYK +
Sbjct: 121 EVEKRYKNQ 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585518|ref|XP_002533450.1| conserved hypothetical protein [Ricinus communis] gi|223526699|gb|EEF28934.1| conserved hypothetical protein [Ricinus communis]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/129 (82%), Positives = 120/129 (93%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VA EAA+A +LT+PSPK LK RLVSLVSLILQPALF+VPFAGFQLLDIY
Sbjct: 1   MALQWMILTYVVAVEAALAAVLTVPSPKALKYRLVSLVSLILQPALFVVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTSEICTAAERDRYEKSIYKAQRNVILCA+ACLLYW ++RIC YYK++Q+LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCASACLLYWCVYRICHYYKEIQKLE 120

Query: 121 EVEKRYKEE 129
           EVEKR K++
Sbjct: 121 EVEKRSKDQ 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346470577|gb|AEO35133.1| hypothetical protein [Amblyomma maculatum]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 116/128 (90%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQW+IL Y VAAEAAI +LLT+PSPKLLK+++VSLVSL+LQPA  IVPFA FQ++D+Y
Sbjct: 1   MALQWMILGYVVAAEAAIVLLLTLPSPKLLKSQIVSLVSLLLQPATGIVPFAAFQIMDLY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCTS  CTAAERDRYEK+IYKAQRN +LC +ACLLYWS++RICKY+K+++ LE
Sbjct: 61  WKNEHRLMCTSSECTAAERDRYEKTIYKAQRNFVLCVSACLLYWSMYRICKYHKEIKELE 120

Query: 121 EVEKRYKE 128
           E EKRYK+
Sbjct: 121 EAEKRYKD 128

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|388507660|gb|AFK41896.1| unknown [Lotus japonicus]

 Score =  207 bits (528), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 109/129 (84%), Positives = 118/129 (91%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQWLIL Y VAAEAA+AILLT+PSPKLL+NR VSLVSLILQPALFIVPFAGFQLLDIY
Sbjct: 1   MALQWLILTYIVAAEAAVAILLTLPSPKLLRNRFVSLVSLILQPALFIVPFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRLMCT E+CTAAERDRYEKSIYKAQRN ILC +ACLLYW I+RICKY KD+Q LE
Sbjct: 61  WKNEHRLMCTGEVCTAAERDRYEKSIYKAQRNAILCVSACLLYWCIYRICKYQKDLQSLE 120

Query: 121 EVEKRYKEE 129
           EVEKR K +
Sbjct: 121 EVEKRAKSQ 129

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847100|ref|XP_002891431.1| hypothetical protein ARALYDRAFT_473983 [Arabidopsis lyrata subsp. lyrata] gi|297337273|gb|EFH67690.1| hypothetical protein ARALYDRAFT_473983 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 98/129 (75%), Positives = 109/129 (84%)

Query: 1   MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
           MALQWLIL Y VAAE  I ++LT+P P LLK R+V LVSLILQPA  IV FAGFQLLDIY
Sbjct: 1   MALQWLILTYVVAAEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60

Query: 61  WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
           WK+EHRL C+SE+CTA ERDRYEKSIYKAQRNV+LCAA  LLYW I+RICKY KD++RLE
Sbjct: 61  WKAEHRLSCSSEVCTATERDRYEKSIYKAQRNVVLCAAGILLYWCIYRICKYNKDLERLE 120

Query: 121 EVEKRYKEE 129
             EKRYKEE
Sbjct: 121 ATEKRYKEE 129

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
TAIR|locus:2198040	129	AT1G48440 "AT1G48440" [Arabido	1.0	1.0	0.666	3.2e-42
TAIR|locus:2089789	129	AT3G17780 "AT3G17780" [Arabido	1.0	1.0	0.635	4e-42
TAIR|locus:2167170	130	AT5G17190 "AT5G17190" [Arabido	1.0	0.992	0.333	1.6e-17
TAIR|locus:2097775	130	AT3G03160 "AT3G03160" [Arabido	0.992	0.984	0.338	2.9e-16

TAIR|locus:2198040 AT1G48440 "AT1G48440" [Arabidopsis thaliana (taxid:3702)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 86/129 (66%), Positives = 95/129 (73%)

Query:     1 MALQWXXXXXXXXXXXXXXXXXXXPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
             MALQW                   P P LLK R+V LVSLILQPA  IV FAGFQLLDIY
Sbjct:     1 MALQWLILSYVVAVEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60

Query:    61 WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
             WK+EHRL C+SE+CTA ERDRYEKSIYKAQRNV+LCAA  LLYW I+RICKY KD++RLE
Sbjct:    61 WKAEHRLSCSSEVCTATERDRYEKSIYKAQRNVVLCAAGILLYWCIYRICKYNKDLERLE 120

Query:   121 EVEKRYKEE 129
               EKR+KEE
Sbjct:   121 ATEKRFKEE 129

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2089789 AT3G17780 "AT3G17780" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 82/129 (63%), Positives = 97/129 (75%)

Query:     1 MALQWXXXXXXXXXXXXXXXXXXXPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
             MALQW                   P P LLK R+VSL+SLIL PA  IV FAGFQLLDIY
Sbjct:     1 MALQWLILSYVVAAEVAIAVILTLPYPMLLKKRIVSLISLILNPAASIVAFAGFQLLDIY 60

Query:    61 WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
             WK+EHRL+C+SE+CT  ERDR+EKS+YKAQRN +LCAA  LLYW IFRICKY+KD++RLE
Sbjct:    61 WKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILLYWCIFRICKYHKDLERLE 120

Query:   121 EVEKRYKEE 129
             ++EKRYK+E
Sbjct:   121 QLEKRYKDE 129

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2167170 AT5G17190 "AT5G17190" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 43/129 (33%), Positives = 68/129 (52%)

Query:     1 MALQWXXXXXXXXXXXXXXXXXXXPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
             MAL+W                   P    L+  LV++   +L+P L I+PF  F L+DIY
Sbjct:     1 MALEWVVLGYAAAAEAIMVILLTMPGLDALRKGLVAVTRNLLKPFLSIIPFCLFLLMDIY 60

Query:    61 WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
             WK E R  C  + CT +E  R++KSI K+QRN +L A+A + YW ++ +      +++L 
Sbjct:    61 WKYETRPSCDGDSCTPSEHLRHQKSIMKSQRNALLIASALVFYWILYSVTNLVVRIEQLN 120

Query:   121 EVEKRYKEE 129
             +  +R K +
Sbjct:   121 QRVERLKNK 129

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2097775 AT3G03160 "AT3G03160" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%)

Query:     1 MALQWXXXXXXXXXXXXXXXXXXXPSPKLLKNRLVSLVSLILQPALFIVPFAGFQLLDIY 60
             MAL+W                   P    L+  LV++   +L+P L IVPF  F L+DIY
Sbjct:     1 MALEWVVLGYAAAAEAIMVVLLTMPGLDGLRKGLVAVTRNLLKPFLSIVPFCLFLLMDIY 60

Query:    61 WKSEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLE 120
             WK E    C  + CT +E  R++KS+ K+QRN +L AAA + YW ++ +      ++ L 
Sbjct:    61 WKYETMPSCDGDSCTPSEHLRHQKSMMKSQRNALLIAAALVFYWILYSVTNLVVKIEHLN 120

Query:   121 E-VEK-RYKE 128
             + +E+ R K+
Sbjct:   121 QRIERLRNKD 130


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.138   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      129       110   0.00091  102 3  11 22  0.37    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  132 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.66u 0.10s 11.76t   Elapsed:  00:00:00
  Total cpu time:  11.66u 0.10s 11.76t   Elapsed:  00:00:00
  Start:  Fri May 10 10:23:39 2013   End:  Fri May 10 10:23:39 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_XII0009 SubName- Full=Putative uncharacterized protein; (130 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
PF05529	192	Bap31: B-cell receptor-associated protein 31-like	100.0
KOG1962	216	consensus B-cell receptor-associated protein and r	99.98
COG5374	192	Uncharacterized conserved protein [Function unknow	99.97

>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8

Probab=100.00  E-value=6.1e-39  Score=243.60  Aligned_cols=128  Identities=23%  Similarity=0.319  Sum_probs=109.8

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH-----HhHHHHHHHHH-HHHHHHHHHHH---Hhhhhhccc-
Q 033003            1 MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVS-----LILQPALFIVP-FAGFQLLDIYW---KSEHRLMCT-   70 (129)
Q Consensus         1 MsL~~~lv~~~L~~E~~~~~lL~lPlP~~~r~~l~~~~~-----~~~~~~~~il~-~~~llF~Da~~---ky~~~~~~~-   70 (129)
                      |||||++||++|++||+++++||+|+|+.+|++++++..     ..+++++.+++ +++++|+||+|   ||++..+.. 
T Consensus         1 Msl~~~lvf~~L~~Ei~~~~lL~lPlp~~~R~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lf~ds~~~~~k~~~~~~~~~   80 (192)
T PF05529_consen    1 MSLQWSLVFGLLYAEIAVLLLLVLPLPSPIRRKIFKFLDKSFFSGKFKTVFKILLAILLLLFLDSIRRMYKYSSEYEEAK   80 (192)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            999999999999999999999999999999999998874     34577887777 88999999999   455443322 


Q ss_pred             cccCChh-HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 033003           71 SEICTAA-ERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEVEKRYKE  128 (129)
Q Consensus        71 ~~~~~~~-~~~~~~~~~fraQRN~YisGf~LfL~l~i~R~~~li~~l~~l~~~~~~~k~  128 (129)
                      +++.+++ ++++.++|+||||||+|||||+|||+++|+|+++++.++.+++++.++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~fraQRN~YIsGf~LfL~l~I~r~~~li~~l~~~~~~~~~~~k  139 (192)
T PF05529_consen   81 DDHPNPDRTEDQVLAKKFRAQRNMYISGFALFLSLVIRRVHSLIKELIKLEEKLEALKK  139 (192)
T ss_pred             ccCCCccchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1222333 688899999999999999999999999999999999999999999998775

Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane

>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]

Probab=99.98  E-value=3.1e-31  Score=204.99  Aligned_cols=119  Identities=14%  Similarity=0.205  Sum_probs=101.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH-----HHhHHHHHHHHH-HHHHHHHHHHHH---hhhh-hcccccc
Q 033003            4 QWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLV-----SLILQPALFIVP-FAGFQLLDIYWK---SEHR-LMCTSEI   73 (129)
Q Consensus         4 ~~~lv~~~L~~E~~~~~lL~lPlP~~~r~~l~~~~-----~~~~~~~~~il~-~~~llF~Da~~k---y~~~-~~~~~~~   73 (129)
                      ||++||++|++||+++++||+|+|.+.|++++...     .+.++.++.++. +++++|+||+++   |+.. ....++.
T Consensus         1 ~~tlvf~iL~~Eial~~iL~Lpip~r~~~~~~~~~~~~~~~~~~~~~i~~~~~villlfiDsvr~i~~~~~~~~~~~n~~   80 (216)
T KOG1962|consen    1 YWTLVFTILYAEIALFLILLLPIPPRRRRKIFKDRLKSGLAPQVLKTIATTMIVILLLFIDSVRRIQKYVSEYGSMANPT   80 (216)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCc
Confidence            79999999999999999999999988888887765     346677776666 889999999983   4332 2233456


Q ss_pred             CChhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033003           74 CTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEV  122 (129)
Q Consensus        74 ~~~~~~~~~~~~~fraQRN~YisGf~LfL~l~i~R~~~li~~l~~l~~~  122 (129)
                      .+|..+.+++++.||||||.|||||+|||++||+|+++++.+++++++.
T Consensus        81 ~~~~a~~~~~~~l~raqrn~YisGf~LFL~lvI~R~~~ll~~l~~l~~~  129 (216)
T KOG1962|consen   81 DQPLARTHLLEALFRAQRNLYISGFVLFLSLVIRRLHTLLRELATLRAN  129 (216)
T ss_pred             cchHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            7888999999999999999999999999999999999999999999984

>COG5374 Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=6.5e-31  Score=197.43  Aligned_cols=122  Identities=21%  Similarity=0.233  Sum_probs=102.1

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH-----HhHHHHHHHHH-HHHHHHHHHHHH-hhhhhc----c
Q 033003            1 MALQWLILAYAVAAEAAIAILLTIPSPKLLKNRLVSLVS-----LILQPALFIVP-FAGFQLLDIYWK-SEHRLM----C   69 (129)
Q Consensus         1 MsL~~~lv~~~L~~E~~~~~lL~lPlP~~~r~~l~~~~~-----~~~~~~~~il~-~~~llF~Da~~k-y~~~~~----~   69 (129)
                      ||+||++||.+|++||++++++++|+|++.||++.+.++     ..++.+..++. ++++||+||+++ |....+    .
T Consensus         1 M~iy~~lvfslL~vEm~~f~il~LPlp~r~RR~l~~~~~~~~~~~~~k~il~i~~~~IllLFiDS~~Rv~rv~~~~nl~~   80 (192)
T COG5374           1 MGIYYTLVFSLLVVEMVMFFILVLPLPKRLRRSLMKLYSTSKVYRGFKHILKITFIFILLLFIDSWKRVYRVSKEANLYS   80 (192)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHhHHhhhhhhhhhhcc
Confidence            999999999999999999999999999999999999885     35566776666 999999999773 322111    1


Q ss_pred             ccccCChhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033003           70 TSEICTAAERDRYEKSIYKAQRNVILCAAACLLYWSIFRICKYYKDVQRLEEV  122 (129)
Q Consensus        70 ~~~~~~~~~~~~~~~~~fraQRN~YisGf~LfL~l~i~R~~~li~~l~~l~~~  122 (129)
                      .+......++.+..+|+|++|||||+||++|||++|+.|+++++.++.+.++.
T Consensus        81 a~~n~~~~~~i~~las~fy~qrnmyl~g~~L~l~~~v~~~~~~v~~ml~~~~~  133 (192)
T COG5374          81 ASINNYAVTRIAVLASRFYAQRNMYLSGSALFLSIVVMRVMSIVEEMLEENAK  133 (192)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            12233467788899999999999999999999999999999999999888833

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00