Citrus Sinensis ID: 033023

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEccccccccccHHHccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHEccEEHHHccEEEEEcccccccccHHHHHHHcHHHHHHHHHHHHHHHccccEcccEHHHHHHHHcccccccccEcc
Coil and Loop (DISEMBL)
MASNNKLAAAIFVLSVLLSTtmssacgscnpsphrppaatpppataycptntlklgacagvlgtnvavgsppysqccaILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSlcnrpipagfkca
Flexible Loop (DISEMBL)
MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Low Complexity Region (SEG)
MASNNKLAAAIFvlsvllsttmssACGSCNpsphrppaatpppataycptntLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Disordered region (IsUnstruct)
******LAAAIFVLSVLLSTTM**********************TAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAG****
Disordered Region (DISOPRED)
*****KL*AAIFVLSVLLSTTMSSAC***********************TNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Disordered Region (DISEMBL)
MASNNKLAAAIFVLSVLLSTTM******************PPPATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Disordered Region (DISPRO)
****NKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAAT*****AYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
P14009	137	14 kDa proline-rich prote	N/A	no	0.627	0.591	0.518	3e-16
Q01595	129	Cortical cell-delineating	N/A	no	0.651	0.651	0.529	3e-16
Q8RW93	128	Putative lipid-binding pr	no	no	0.736	0.742	0.4	1e-13
Q00451	346	36.4 kDa proline-rich pro	N/A	no	0.658	0.245	0.379	4e-08
P24337	80	Hydrophobic seed protein	no	no	0.542	0.875	0.395	6e-06

>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 48  CPTNTLKLGACAGVLG--TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIEL 105
           CP + LKLG CA VL    NV +GSPP   CC++L GL  +EAA+CLC AIKAN+L   L
Sbjct: 54  CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNL 113

Query: 106 NWPTNIGLILSLCNRPIPAGFKC 128
           N P  + L+L+ C + +P GF+C
Sbjct: 114 NLPIALSLVLNNCGKQVPNGFEC 136

May be connected with the initiation of embryogenesis or with the metabolic changes produced by the removal of auxins.
Daucus carota (taxid: 4039)

>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 1/85 (1%)

Query: 44  ATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAI 103
           +   CP + LKL  CA VLG  V VG P Y QCC +L GL +++AALCLC AIKANVL I
Sbjct: 44  SHGRCPIDALKLKVCAKVLGL-VKVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGI 102

Query: 104 ELNWPTNIGLILSLCNRPIPAGFKC 128
            LN P ++  IL+ C R  P  F C
Sbjct: 103 HLNVPLSLNFILNNCGRICPEDFTC 127

Delineates a novel subset of developing cortical cells. It is probably involved in some aspect of transport of molecules to or from the vasculature.

Zea mays (taxid: 4577)

>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)

Query: 34  HRPPAAT-----PPPA---TAYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLG 84
           H  P AT     PPPA   T  CP +TLK G C   LG  +  +G+PP  +CC+++ GL 
Sbjct: 24  HVTPGATVKPCPPPPAKQATTKCPRDTLKFGVCGSWLGLVSEVIGTPPSQECCSLIKGLA 83

Query: 85  EVEAALCLCLAIKANVLAIE-LNWPTNIGLILSLCNRPIPAGFKC 128
           + EAA+CLC A+K ++L +  +  P  + L+L+ C + +P GF C
Sbjct: 84  DFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128

Arabidopsis thaliana (taxid: 3702)

>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 44  ATAYCPTNTLKLGACAGVLGTNVAVGSPPYSQ--CCAILGGLGEVEAALCLCLAIKANVL 101
           A   CP + LKLGAC  VLG  + +G    ++  CC +LGGL +++AA+CLC  I+  +L
Sbjct: 257 AQPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLL 316

Query: 102 AIELNWPTNIGLILSLCNRPIPAGFKC 128
            I +  P  + +++  C +  P  FKC
Sbjct: 317 NINIILPIALQVLIDDCGKYPPKDFKC 343

Solanum lycopersicum (taxid: 4081)

>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 11/81 (13%)

Query: 48  CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNW 107
           CP  ++ L    G LGT           CCA++GGLG++EA +CLC+ ++A  L I LN 
Sbjct: 8   CPDLSICLNILGGSLGT--------VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNL 56

Query: 108 PTNIGLILSLCNRPIPAGFKC 128
             N+ LIL+ C R  P+   C
Sbjct: 57  NRNLQLILNSCGRSYPSNATC 77

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
255548874	131	14 kDa proline-rich protein DC2.15 precu	0.984	0.969	0.561	1e-29
118488240	121	unknown [Populus trichocarpa]	0.914	0.975	0.527	7e-27
388511787	128	unknown [Lotus japonicus]	0.984	0.992	0.561	3e-26
225430322	128	PREDICTED: putative lipid-binding protei	0.968	0.976	0.561	2e-23
357437015	154	14 kDa proline-rich protein DC2.15 [Medi	0.992	0.831	0.451	5e-23
357437017	164	14 kDa proline-rich protein DC2.15 [Medi	0.992	0.780	0.418	4e-22
146141284	166	bimodular protein [Medicago falcata]	0.992	0.771	0.431	2e-21
508304	166	bimodular protein [Medicago sativa]	0.992	0.771	0.431	3e-21
225427023	132	PREDICTED: 14 kDa proline-rich protein D	0.837	0.818	0.481	1e-20
357437019	151	14 kDa proline-rich protein DC2.15 [Medi	0.992	0.847	0.467	1e-20

>gi|255548874|ref|XP_002515493.1| 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis] gi|223545437|gb|EEF46942.1| 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 3/130 (2%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAG 60
           MAS N L A IF+LS+L+S+T S ACGSC P P   P A  PP+   CP + LKLG CA 
Sbjct: 1   MASKN-LPAFIFILSILISSTFSDACGSCQPKPKPTPPAVSPPSKPSCPIDALKLGVCAD 59

Query: 61  VLG-TNVAVGSPPY-SQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLC 118
           +LG  NV VG PP  S+CCA+L GL + EAALCLC AIKANVL I LN P ++ L++S C
Sbjct: 60  LLGLVNVVVGDPPSGSKCCAVLQGLVDAEAALCLCTAIKANVLGINLNVPVSLSLLVSAC 119

Query: 119 NRPIPAGFKC 128
           ++ +P GF+C
Sbjct: 120 SKSVPPGFQC 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488240|gb|ABK95939.1| unknown [Populus trichocarpa]

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 84/127 (66%), Gaps = 9/127 (7%)

Query: 3   SNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAGVL 62
           ++ KL A I +LS+L  +T SSACG C P          PP    CP +TLKLGACA +L
Sbjct: 2   ASEKLTATILILSLLFFSTFSSACGPCQPKT--------PPTEPTCPRDTLKLGACADIL 53

Query: 63  G-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRP 121
           G  NV VGSPPYS+CC +L GL ++E ALCLC AIKA+VL I LN P  + +++S C + 
Sbjct: 54  GLVNVVVGSPPYSKCCPLLEGLADLEVALCLCTAIKASVLGINLNVPVALSVLVSACGKS 113

Query: 122 IPAGFKC 128
           IP GFKC
Sbjct: 114 IPPGFKC 120

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511787|gb|AFK43955.1| unknown [Lotus japonicus]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 3/130 (2%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAG 60
           MAS+ KL AAIFVLS+L  +T S ACGSCNP+P +P     P     CP +TLKLGACA 
Sbjct: 1   MASH-KLIAAIFVLSLLSYSTFSHACGSCNPTP-KPKPKPTPAPAGKCPKDTLKLGACAD 58

Query: 61  VLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCN 119
           +LG  NV +GSP  S+CCA+L GL ++EAA+CLC A+KANVL I LN P  + ++LS C 
Sbjct: 59  LLGLVNVVLGSPASSKCCALLEGLADLEAAVCLCTAVKANVLGINLNVPVTLSVLLSACQ 118

Query: 120 RPIPAGFKCA 129
           + +P+GF+CA
Sbjct: 119 KTVPSGFQCA 128

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430322|ref|XP_002285197.1| PREDICTED: putative lipid-binding protein At4g00165 [Vitis vinifera]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 90/130 (69%), Gaps = 5/130 (3%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAG 60
           MASNN L+AAI VLS+LL +T SSACG C P P  P  A P  A  +CP +TLK G CA 
Sbjct: 1   MASNN-LSAAILVLSLLLFSTFSSACGPCQPKPTPPAKAPP--ANPFCPRDTLKFGVCAD 57

Query: 61  VLGTNVAV--GSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLC 118
           +LG  V++  GSPP S+CCA+L GL ++EAA CLC AIKA+VL I +  P  I L++S C
Sbjct: 58  LLGGLVSLVAGSPPSSKCCAVLEGLADLEAAACLCTAIKASVLGINVKVPVAISLLISAC 117

Query: 119 NRPIPAGFKC 128
            + IP GFKC
Sbjct: 118 GKSIPPGFKC 127

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437015|ref|XP_003588783.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|355477831|gb|AES59034.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 27/155 (17%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPH------------------------RP 36
           MASN KL+A I + S+L  +T S ACGSC P+P                          P
Sbjct: 1   MASN-KLSALIILFSLLSYSTFSHACGSCKPTPTSPPPPSTTPKASPPPKASTPPPSTTP 59

Query: 37  PAATPPPATAY-CPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCL 94
            ++ P P+T+  CP++TLKLG CA VLG  NV VGSP  S+CC ++ GL +++AA+CLC 
Sbjct: 60  KSSPPTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCTLIQGLADLDAAVCLCT 119

Query: 95  AIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           AIKANVL I LN P  + L+LS C + +P GF+C+
Sbjct: 120 AIKANVLGINLNVPVTLSLLLSACEKSVPNGFQCS 154

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437017|ref|XP_003588784.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|355477832|gb|AES59035.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 37/165 (22%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCN-----------------PSPHRPPAATPPP 43
           MASN K +A I + S+L  +T S+ACGSC                  P P   P A+PPP
Sbjct: 1   MASN-KHSALIILFSLLAYSTFSNACGSCKPTPPSPPPPSKTPKACPPPPSTTPKASPPP 59

Query: 44  AT------------------AYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLG 84
                                 CP++TLKLG CA VLG  NV VG+P  S+CC ++ GL 
Sbjct: 60  TAITPPSTTPKSSPPTPSTAQKCPSDTLKLGVCADVLGLVNVIVGNPASSKCCTLIQGLA 119

Query: 85  EVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           +++AA+CLC AIKANVL I LN P  + L+LS C + +P GF+C+
Sbjct: 120 DLDAAVCLCTAIKANVLGINLNVPVTLSLLLSACQKSVPNGFQCS 164

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|146141284|gb|ABQ01426.1| bimodular protein [Medicago falcata]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 39/167 (23%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHR------------PPAATPPPAT--- 45
           MASNN L+A I + S+L  +T S ACGSC P+P              PP +T P A+   
Sbjct: 1   MASNN-LSALIILFSLLAYSTFSHACGSCRPTPPSPPPPSKTPKACPPPPSTTPKASPPP 59

Query: 46  ----------------------AYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGG 82
                                   CPT+TLKLG CA VLG  NV VGSP  S+CC ++ G
Sbjct: 60  KASTPPPTPTTPKPSPPTPSTSQKCPTDTLKLGVCADVLGLVNVIVGSPASSKCCTLIQG 119

Query: 83  LGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           L +++AA+CLC AIKAN+L I LN P  + L+LS C + IP GF+C+
Sbjct: 120 LADLDAAVCLCTAIKANILGINLNVPITLSLLLSACEKSIPNGFQCS 166

Source: Medicago falcata

Species: Medicago falcata

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|508304|gb|AAA32650.1| bimodular protein [Medicago sativa]

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 39/167 (23%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHR------------PPAATPPPAT--- 45
           MASNN L+A I + S+L  +T S ACGSC P+P              PP +T P A+   
Sbjct: 1   MASNN-LSALIILFSLLAYSTFSHACGSCKPTPPSPPPPSKTPKACPPPPSTTPKASPPP 59

Query: 46  ----------------------AYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGG 82
                                   CPT+TLKLG CA VLG  NV VGSP  S+CC ++ G
Sbjct: 60  KASTPPPTPTTPKPSPPTPSTSQKCPTDTLKLGVCADVLGLVNVIVGSPASSKCCTLIQG 119

Query: 83  LGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           L +++AA+CLC AIKAN+L I LN P  + L+LS C + IP GF+C+
Sbjct: 120 LADLDAAVCLCTAIKANILGINLNVPITLSLLLSACEKSIPNGFQCS 166

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427023|ref|XP_002271461.1| PREDICTED: 14 kDa proline-rich protein DC2.15 isoform 1 [Vitis vinifera]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 22  MSSACGSCNPSPHRPPAATPPPATAYCPTNTLKLGACAGVLGT--NVAVGSPPYSQCCAI 79
           +SS    C P+P        PPA A CP +TLKLG CA +L    +  VG+PP S CC++
Sbjct: 23  VSSTSVPCPPAPKPKNHHKKPPAKAVCPKDTLKLGVCADLLNDLLHAVVGTPPKSPCCSL 82

Query: 80  LGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           +GGL ++EAA+CLC AIKANVL I+LN P ++ L+L+ C + +P G++CA
Sbjct: 83  IGGLADLEAAVCLCTAIKANVLGIKLNVPVSLSLLLNYCGKKVPTGYQCA 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437019|ref|XP_003588785.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|355477833|gb|AES59036.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|388496896|gb|AFK36514.1| unknown [Medicago truncatula] gi|388514065|gb|AFK45094.1| unknown [Medicago truncatula]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 92/152 (60%), Gaps = 24/152 (15%)

Query: 1   MASNNKLAAAIFVLSVLLSTTMSSACGSCNPSPHRPPAATPPPAT--------------- 45
           MASN KL+A I + S+L  +T S ACGSC P+P   P   P P+                
Sbjct: 1   MASN-KLSALIILFSLLAYSTFSHACGSCKPTPSPKPKPKPKPSPPPPSSTPCPPTPSTT 59

Query: 46  -------AYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIK 97
                    CP++TLKLG CA VLG  NV VGSP  S+CCA+L GL +++AA+CLC AIK
Sbjct: 60  PPTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLDAAICLCTAIK 119

Query: 98  ANVLAIELNWPTNIGLILSLCNRPIPAGFKCA 129
           ANVL I LN P  + L+LS C + +P+GF+C+
Sbjct: 120 ANVLGINLNVPITLSLLLSACEKSVPSGFQCS 151

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
TAIR|locus:2203886	149	AT1G62510 [Arabidopsis thalian	0.589	0.510	0.5	1.2e-21
TAIR|locus:2135595	161	AZI1 "azelaic acid induced 1"	0.596	0.478	0.506	4.1e-21
TAIR|locus:2008880	137	ELP "extensin-like protein" [A	0.589	0.554	0.487	6.6e-21
TAIR|locus:2135610	168	EARLI1 "EARLY ARABIDOPSIS ALUM	0.596	0.458	0.468	1.7e-20
TAIR|locus:2050901	134	AT2G45180 [Arabidopsis thalian	0.596	0.574	0.551	9.2e-20
TAIR|locus:2170962	127	AT5G46890 [Arabidopsis thalian	0.589	0.598	0.532	5.8e-18
TAIR|locus:2170972	127	AT5G46900 [Arabidopsis thalian	0.589	0.598	0.532	7.5e-18
TAIR|locus:2135545	129	AT4G12510 [Arabidopsis thalian	0.596	0.596	0.493	9.5e-18
TAIR|locus:2135555	129	AT4G12520 [Arabidopsis thalian	0.596	0.596	0.493	9.5e-18
TAIR|locus:2135635	177	AT4G12500 [Arabidopsis thalian	0.596	0.435	0.468	4.1e-17

TAIR|locus:2203886 AT1G62510 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 39/78 (50%), Positives = 55/78 (70%)

Query:    53 LKLGACAGVLG--TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             LKLG CA VL    NV +G PP   CC ++ GL ++EAA CLC A+KAN+L I LN P +
Sbjct:    72 LKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKANILGINLNIPLS 131

Query:   111 IGLILSLCNRPIPAGFKC 128
             + L+L++C++ +P GF+C
Sbjct:   132 LSLLLNVCSKKVPRGFQC 149

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135595 AZI1 "azelaic acid induced 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 40/79 (50%), Positives = 60/79 (75%)

Query:    53 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             LKLG CA VL +  N+ +G P   QCC+++ GL +V+AA+CLC A++ANVL I LN P +
Sbjct:    83 LKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINLNVPIS 142

Query:   111 IGLILSLCNRPIPAGFKCA 129
             + ++L++CNR +P+GF+CA
Sbjct:   143 LSVLLNVCNRKLPSGFQCA 161

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009627 "systemic acquired resistance" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2008880 ELP "extensin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
 Identities = 38/78 (48%), Positives = 57/78 (73%)

Query:    53 LKLGACAGVLG--TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             LKLG CA VL    ++ +G PP   CC+++ GL +VEAA+CLC A+KAN+L I LN P +
Sbjct:    60 LKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPIS 119

Query:   111 IGLILSLCNRPIPAGFKC 128
             + L+L++C++ +P GF+C
Sbjct:   120 LSLLLNVCSKQLPPGFQC 137

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2135610 EARLI1 "EARLY ARABIDOPSIS ALUMINUM INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 37/79 (46%), Positives = 59/79 (74%)

Query:    53 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             L+LG CA VL +  N+ +G P    CC+++ GL +++AA+CLC A++ANVL I LN P +
Sbjct:    90 LRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPIS 149

Query:   111 IGLILSLCNRPIPAGFKCA 129
             + ++L++CNR +P+GF+CA
Sbjct:   150 LSVLLNVCNRKVPSGFQCA 168

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009409 "response to cold" evidence=RCA;IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2050901 AT2G45180 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 43/78 (55%), Positives = 57/78 (73%)

Query:    53 LKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNI 111
             LKLG CA +LG  NV VGSPP + CC +L GL  +EAA+CLC A+KANVL I LN P ++
Sbjct:    57 LKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINLNVPIDL 116

Query:   112 GLILSLCNRPIPAGFKCA 129
              L+L+ C + +P GF+C+
Sbjct:   117 TLLLNYCGKKVPHGFQCS 134

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

TAIR|locus:2170962 AT5G46890 [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 41/77 (53%), Positives = 55/77 (71%)

Query:    53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIG 112
             LKL  CA VL   V V  PP S CCA++ GL ++EAA+CLC A+KANVL I LN P ++ 
Sbjct:    52 LKLKVCANVLDV-VKVSLPPTSNCCALIKGLVDLEAAVCLCTALKANVLGINLNVPISLN 110

Query:   113 LILSLCNRPIPAGFKCA 129
             ++L+ C + +P+GFKCA
Sbjct:   111 VVLNHCGKKVPSGFKCA 127

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2170972 AT5G46900 [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 41/77 (53%), Positives = 55/77 (71%)

Query:    53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIG 112
             LKL  CA VL   V V  PP S CCA++ GL ++EAA+CLC A+KANVL I LN P ++ 
Sbjct:    52 LKLKVCANVLDL-VKVSLPPTSNCCALIKGLVDLEAAVCLCTALKANVLGINLNVPISLN 110

Query:   113 LILSLCNRPIPAGFKCA 129
             ++L+ C + +P+GFKCA
Sbjct:   111 VVLNHCGKKVPSGFKCA 127

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135545 AT4G12510 [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/79 (49%), Positives = 55/79 (69%)

Query:    53 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             LKLG CA VL     + +G+PP   CC++L GL ++EAA CLC A+KA VL I LN P +
Sbjct:    51 LKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVS 110

Query:   111 IGLILSLCNRPIPAGFKCA 129
             + L+L++C + +P+GF CA
Sbjct:   111 LSLLLNVCGKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135555 AT4G12520 [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/79 (49%), Positives = 55/79 (69%)

Query:    53 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             LKLG CA VL     + +G+PP   CC++L GL ++EAA CLC A+KA VL I LN P +
Sbjct:    51 LKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVS 110

Query:   111 IGLILSLCNRPIPAGFKCA 129
             + L+L++C + +P+GF CA
Sbjct:   111 LSLLLNVCGKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135635 AT4G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 37/79 (46%), Positives = 57/79 (72%)

Query:    53 LKLGACAGVLG--TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTN 110
             L+LG CA VL    NV +G P    CC+++ GL +++AA+CLC A++ANVL I LN P +
Sbjct:    99 LRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPIS 158

Query:   111 IGLILSLCNRPIPAGFKCA 129
             + ++L++CNR +P+ F+CA
Sbjct:   159 LSVLLNVCNRRLPSDFQCA 177

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032674001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (128 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	129
cd01958	85	cd01958, HPS_like, HPS_like: Hydrophobic Protein f	4e-23
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	7e-10
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	5e-04

>gnl|CDD|238924 cd01958, HPS_like, HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

 Score = 85.5 bits (212), Expect = 4e-23
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 1/82 (1%)

Query: 48  CPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELN 106
           CP + LKLG CA VLG + + +G+P    CC ++GGL +++AA+CLC AIKAN+L I +N
Sbjct: 4   CPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISIN 63

Query: 107 WPTNIGLILSLCNRPIPAGFKC 128
            P  + L+L+ C R +P GF C
Sbjct: 64  IPVALSLLLNSCGRNVPPGFTC 85

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset of cortical cells. Length = 85

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 51.4 bits (123), Expect = 7e-10
 Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 48  CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNW 107
           C    LKL  CAG L     V   P  QCC+ L  L     A C C AI+A VL IE   
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQV---PSQQCCSQLRQL----QAQCRCTAIRAIVLGIEGIN 53

Query: 108 PTNIGLILSLCNRPIPAGFKC 128
           P     + S+C   +P G  C
Sbjct: 54  PQAAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 36.2 bits (83), Expect = 5e-04
 Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 48  CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNW 107
           C    L+L  C   L    + G+PP  QCC+    L  + +A C CLA++A VL I    
Sbjct: 1   CGQVLLQLAPCLSYL-VGGSRGAPPSQQCCS---QLRGLNSAQCRCLALRAAVLGILEIP 56

Query: 108 PTNIGLILSL---CNRPIP 123
             N     SL   C  P P
Sbjct: 57  GLNAQNAASLPSACGVPPP 75

Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	100.0
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	100.0
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	96.85
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	96.83
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	96.22
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	96.2
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	93.01
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	92.93
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	92.11
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	87.22

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=100.00  E-value=8.5e-38  Score=219.57  Aligned_cols=83  Identities=48%  Similarity=1.094  Sum_probs=81.3

Q ss_pred             CCCCcccccccccccccc-ceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCC
Q 033023           46 AYCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~-~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~  124 (129)
                      ++||+|++|||+|+|||| +++.+|.|++++||++|+||+|+|||+|||||||+|+|||++|+|+++++++|+|||++|+
T Consensus         2 ~~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P~   81 (85)
T cd01958           2 PTCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVPP   81 (85)
T ss_pred             CCCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCCC
Confidence            689999999999999999 8888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcc
Q 033023          125 GFKC  128 (129)
Q Consensus       125 gf~C  128 (129)
                      ||+|
T Consensus        82 gf~C   85 (85)
T cd01958          82 GFTC   85 (85)
T ss_pred             CCcC
Confidence            9998

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=100.00  E-value=8.9e-37  Score=214.25  Aligned_cols=83  Identities=49%  Similarity=1.131  Sum_probs=81.4

Q ss_pred             CCCcccccccccccccc-ceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccc-eeccccchHHHHHhhcCCCCCC
Q 033023           47 YCPTNTLKLGACAGVLG-TNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLA-IELNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        47 ~CP~d~lkL~vCa~vL~-~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLg-i~~~~pv~l~~lln~CGk~~P~  124 (129)
                      +||+|++||++|+|||| +++.+|.|++++||++|+||+|+|||+|||+|+|+|++| |++|+|++++++||.|||++|+
T Consensus         1 ~CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p~   80 (85)
T PF14547_consen    1 TCPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVPS   80 (85)
T ss_pred             CCCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCcC
Confidence            69999999999999999 999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             CCccC
Q 033023          125 GFKCA  129 (129)
Q Consensus       125 gf~C~  129 (129)
                      ||+|+
T Consensus        81 gf~C~   85 (85)
T PF14547_consen   81 GFTCP   85 (85)
T ss_pred             CCcCC
Confidence            99996

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=96.85  E-value=0.00018  Score=48.86  Aligned_cols=57  Identities=25%  Similarity=0.585  Sum_probs=34.4

Q ss_pred             CCCCCCCccchhcCCccchhhHHHHHHhhhcc-cceeccccchHHHHHhhcCCCCCCCCcc
Q 033023           69 GSPPYSQCCAILGGLGEVEAALCLCLAIKANV-LAIELNWPTNIGLILSLCNRPIPAGFKC  128 (129)
Q Consensus        69 g~p~~~~CC~li~gL~d~~AA~CLC~aikanv-Lgi~~~~pv~l~~lln~CGk~~P~gf~C  128 (129)
                      +..|.++||.-++.+.+. ...|||..++... .++++|..- ...|...||...|. ++|
T Consensus        39 ~~~Ps~~CC~~l~~~~~~-~~~ClC~~~~~~~~~~~~in~~~-a~~Lp~~Cg~~~~~-~~C   96 (96)
T PF14368_consen   39 GPAPSAACCSALKSVVQA-DPPCLCQLLNSPGAPGFGINVTR-ALALPAACGVPVPP-SKC   96 (96)
T ss_dssp             -----HHHHHHHCC-----HCCHHHCCCC-CCHCHHCCTCHH-HHHHHHHCTSS-S-----
T ss_pred             CCCCCHHHHHHHHHhccC-CCCCHHHhcCccccccCCcCHHH-HHHHHHHcCCCCCC-CCC
Confidence            445778999999999874 4899999999876 555667444 45678999999998 887

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=96.83  E-value=0.00036  Score=44.62  Aligned_cols=74  Identities=39%  Similarity=0.716  Sum_probs=50.2

Q ss_pred             CccccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhccccee----ccccchHHHHHhhcCCCCCC
Q 033023           49 PTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIE----LNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        49 P~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~----~~~pv~l~~lln~CGk~~P~  124 (129)
                      .....++..|..++.... ...++.++||..++++.   ...|+|.+++....++.    ++ ......|.+.||...|.
T Consensus         2 ~~~~~~~~~c~~~~~~~~-~~~~p~~~CC~~l~~~~---~~~C~C~~~~~~~~~~~~~~~~~-~~~a~~lp~~C~~~~~~   76 (79)
T smart00499        2 GQVLLQLAPCLSYLTGGS-PGAPPSQQCCSQLRGLN---SAQCRCLALRAAVLGILEIPGVN-AQNAASLPSACGVPPPY   76 (79)
T ss_pred             hhhhhhHHhhHHHHcCCC-CCCCCchHHHHHHHHhc---ccCCcchhhhcccccccchhhhh-HHHHHhhHHhcCCCCCC
Confidence            334445556776653110 12346788999999998   66799999998876653    23 44567788999999875


Q ss_pred             CCcc
Q 033023          125 GFKC  128 (129)
Q Consensus       125 gf~C  128 (129)
                       +.|
T Consensus        77 -~~C   79 (79)
T smart00499       77 -TDC   79 (79)
T ss_pred             -CCC
Confidence             554

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=96.22  E-value=0.0012  Score=44.22  Aligned_cols=65  Identities=28%  Similarity=0.556  Sum_probs=46.8

Q ss_pred             cccccccccccceeeeCC---CCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCCCCcc
Q 033023           53 LKLGACAGVLGTNVAVGS---PPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC  128 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g~---p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~gf~C  128 (129)
                      .+|..|...+.    -|.   +|.+.||+-|+.+ |.   .|+|..++...+.+ +|.. ....|-+.||..+|. ++|
T Consensus         6 ~~L~~C~~yl~----~~~~~~~Ps~~CC~~vk~~-~~---~C~C~~~~~~~~~~-i~~~-~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           6 DLLAECQPYVT----GPNPPPPPSRECCAALRRA-DL---PCLCRYKTSLVLQI-IDPD-KAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             HHHHHHHHHHc----CCCCCCCCCHHHHHHHHcC-Cc---CCEeeccCCCcccc-cCHH-HHHHHHHHcCCCCCC-CCC
Confidence            46677877752    122   3567899999985 22   39999998876553 5544 357788999999999 987

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=96.20  E-value=0.00076  Score=45.16  Aligned_cols=62  Identities=34%  Similarity=0.637  Sum_probs=46.0

Q ss_pred             cccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCC
Q 033023           53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~  124 (129)
                      .+|..|....    ..|.+|.++||..|+.     +--|||.-+|...++.-||.+-+ .-|.+.||..+|.
T Consensus         4 ~~L~~C~~ai----~~~~~Ps~~CC~~Lk~-----~~~CLC~y~~~p~l~~~i~~~~A-~~l~~~Cgv~~P~   65 (66)
T cd01959           4 TQLSPCLPAI----LGGSPPSAACCAKLKE-----QQSCLCQYAKNPSLKQYVNSPNA-RKVLAACGVPYPN   65 (66)
T ss_pred             hhcccCHHHH----hCCCCCCHHHHHHHhc-----CCCCeeeeecCccHHhhcCcHHH-HHHHHHcCCCCCC
Confidence            4678888763    2357888999999997     23799999987666644565554 4577899999864

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=93.01  E-value=0.036  Score=35.25  Aligned_cols=47  Identities=28%  Similarity=0.548  Sum_probs=32.5

Q ss_pred             CCCCCccchhcCCccchhhHHHHHHhhhcccce-ec-cccchHHHHHhhcC
Q 033023           71 PPYSQCCAILGGLGEVEAALCLCLAIKANVLAI-EL-NWPTNIGLILSLCN  119 (129)
Q Consensus        71 p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi-~~-~~pv~l~~lln~CG  119 (129)
                      .+.++||.-++.+.+.| ..|||..+|....+. .+ | .-....|.+.||
T Consensus        14 ~Ps~~CC~~l~~~~~~~-~~ClC~~~~~~~~~~~~~~~-~~~a~~LP~~Cg   62 (63)
T cd00010          14 APPSDCCSGLKSVVKSD-PKCLCAALNGPGASLLGLKN-ATRALALPAACG   62 (63)
T ss_pred             CCChHHHHHHHHHHhcC-hhhHHHHHcCccccccCccc-HHHHHhchHhcC
Confidence            46788999999998764 469999999866432 12 2 233455667776

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=92.93  E-value=0.097  Score=37.39  Aligned_cols=22  Identities=27%  Similarity=0.377  Sum_probs=13.2

Q ss_pred             CCCch-hHHHHHHHHHHHHHHHh
Q 033023            1 MASNN-KLAAAIFVLSVLLSTTM   22 (129)
Q Consensus         1 MAsk~-~~~al~l~lnll~f~~~   22 (129)
                      ||||+ ..++|||++.||+++-+
T Consensus         1 MaSK~~llL~l~LA~lLlisSev   23 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEV   23 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhh
Confidence            99996 34455555555555533

Some of them may be involved in resistance to environmental stress [].

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=92.11  E-value=0.036  Score=37.39  Aligned_cols=66  Identities=30%  Similarity=0.564  Sum_probs=47.4

Q ss_pred             cccccccccccceeeeC-CCCCCCccchhcCCccchhhHHHHHHhhhcccce-----------eccccchHHHHHhhcCC
Q 033023           53 LKLGACAGVLGTNVAVG-SPPYSQCCAILGGLGEVEAALCLCLAIKANVLAI-----------ELNWPTNIGLILSLCNR  120 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g-~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi-----------~~~~pv~l~~lln~CGk  120 (129)
                      ..+..|...+.    -+ ..+.++||.-|+.|    -..|.|.+||..+.++           .++.. ....|.+.||.
T Consensus        13 ~~l~~c~~~~~----~~~~~~~~~CC~~L~~l----~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~-~a~~LP~~C~v   83 (90)
T PF00234_consen   13 VRLSPCLPYLQ----GGCQQPSQQCCQQLRQL----DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQ-RAQNLPSMCNV   83 (90)
T ss_dssp             SHHHGGHHHHT----TSSSHHHHHHHHHHHHH----HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHH-HHHHHHHHTTS
T ss_pred             ccccccHHHHh----cccccchHHHhHHHHHH----hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHH-HHHHHHHHCCC
Confidence            45667776652    11 13567899999999    7899999999988773           34433 45778899999


Q ss_pred             CCCCCCcc
Q 033023          121 PIPAGFKC  128 (129)
Q Consensus       121 ~~P~gf~C  128 (129)
                      .+|. |.|
T Consensus        84 ~~~~-~~C   90 (90)
T PF00234_consen   84 SPPY-TDC   90 (90)
T ss_dssp             SSSS-S-G
T ss_pred             CCCC-CCC
Confidence            9887 665

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=87.22  E-value=0.14  Score=35.02  Aligned_cols=67  Identities=25%  Similarity=0.438  Sum_probs=43.2

Q ss_pred             cccccccccccceeeeCCCCCCCccchhcCCccc----hhhHHHHHHhhhccccee-ccccchHHHHHhhcCCCCC
Q 033023           53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV----EAALCLCLAIKANVLAIE-LNWPTNIGLILSLCNRPIP  123 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~----~AA~CLC~aikanvLgi~-~~~pv~l~~lln~CGk~~P  123 (129)
                      .+|.-|..++.-   -+..|.++||.-++.|.+.    +.-.|+|.-+|....++. +|.. .+..|-..||-..|
T Consensus         8 ~~l~~C~~y~~g---~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~-~a~~LP~~C~v~~~   79 (89)
T cd01960           8 SLLAPCLGYLTG---GGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPG-RAAGLPGKCGVSIP   79 (89)
T ss_pred             hhHHhHHHHHhC---CCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHH-HHHhChHhcccCCC
Confidence            467778887631   1134667899999998754    223566766777666553 5533 34567788988754

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	129
1hyp_A	80	Crystal Structure Of Hydrophobic Protein From Soybe		3e-06

>pdb|1HYP|A Chain A, Crystal Structure Of Hydrophobic Protein From Soybean; A Member Of A New Cystine-Rich Family Length = 80

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 54  KLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGL 113
            L  C  +LG ++         CCA++GGLG++EA +CLC+ ++A  L I LN   N+ L
Sbjct: 10  DLSICLNILGGSLGT----VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQL 62
Query: 114 ILSLCNRPIPAGFKC 128
           IL+ C R  P+   C
Sbjct: 63  ILNSCGRSYPSNATC 77
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	129
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	5e-14

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1 Length = 80

 Score = 61.4 bits (149), Expect = 5e-14
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 54  KLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGL 113
            L  C  +LG            CCA++GGLG++EA +CLC+ ++A  +   LN   N+ L
Sbjct: 10  DLSICLNILG----GSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQL 62

Query: 114 ILSLCNRPIPAGFKC 128
           IL+ C R  P+   C
Sbjct: 63  ILNSCGRSYPSNATC 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	129
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	99.96
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	96.32
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	96.18
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	96.02
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	92.82
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	91.87
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	88.15
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	87.95
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	81.96

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=99.96  E-value=9.8e-31  Score=180.95  Aligned_cols=73  Identities=44%  Similarity=1.029  Sum_probs=66.1

Q ss_pred             CCCCccccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCCC
Q 033023           46 AYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAG  125 (129)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~g  125 (129)
                      ++||    |||+|+||||..  +|  +.++||++|+||+|+|||+|||||||+  ||| +|+|+++++|+|+|||++|+|
T Consensus         6 ~~CP----kLgvCanvL~g~--~~--~~~~CC~Ll~GL~dleAAvCLCtaik~--Lgi-lnlpv~L~llln~Cgk~~P~g   74 (80)
T 1hyp_A            6 PSCP----DLSICLNILGGS--LG--TVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSN   74 (80)
T ss_dssp             CCSC----CCGGGGGGGGTC--CT--THHHHHHHHHTSCHHHHHHHHHHHHHH--HTC-SCHHHHHHHHHHHTTCSSCCC
T ss_pred             CCCC----chhHHHHHhCcC--CC--CCCccchhhhCcchhhhhhhhhhhccc--cce-eecChhHHHHHHHhCCcCcCC
Confidence            5799    899999999721  12  668999999999999999999999995  899 999999999999999999999


Q ss_pred             CccC
Q 033023          126 FKCA  129 (129)
Q Consensus       126 f~C~  129 (129)
                      |+|+
T Consensus        75 F~C~   78 (80)
T 1hyp_A           75 ATCP   78 (80)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9996

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=96.32  E-value=0.0005  Score=44.71  Aligned_cols=60  Identities=25%  Similarity=0.533  Sum_probs=44.1

Q ss_pred             ccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCC
Q 033023           54 KLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIP  123 (129)
Q Consensus        54 kL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P  123 (129)
                      +|..|...+.    -|.++..+||.-|++     ...|+|..+|...++..||.+.+ ..|...||..+|
T Consensus         6 ~L~pC~~~v~----~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A-~~Lp~~Cgv~~P   65 (67)
T 1n89_A            6 QLAVCASAIL----SGAKPSGECCGNLRA-----QQGCFCQYAKDPTYGQYIRSPHA-RDTLTSCGLAVP   65 (67)
T ss_dssp             TTHHHHHHHT----TCCCCCHHHHHHHHH-----HSSHHHHGGGCSTTHHHHTCHHH-HHHHHHHTSCCS
T ss_pred             hcccCHHHHc----CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHH-HHHHHHcCCCCC
Confidence            5777877752    244677789999985     47899999987666544665554 457789999987

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=96.18  E-value=0.0016  Score=42.94  Aligned_cols=70  Identities=16%  Similarity=0.364  Sum_probs=47.5

Q ss_pred             CCCCccccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhh---hcccceeccccchHHHHHhhcCCCC
Q 033023           46 AYCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIK---ANVLAIELNWPTNIGLILSLCNRPI  122 (129)
Q Consensus        46 ~~CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aik---anvLgi~~~~pv~l~~lln~CGk~~  122 (129)
                      ..|-.+..+|..|...+.-+  -..+|...||.-+++ +|   -.|||..++   +.-+||  |...+ ..|...||..+
T Consensus         3 ~~C~~~~~~L~pC~~yv~~~--~~~~Ps~~CC~~lk~-~~---~~ClC~~~~~~~~~~~gi--n~~~A-~~LP~~Cgv~~   73 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSKE--NPTSPSQPCCTALQH-AD---FACLCGYKNSPWLGSFGV--DPELA-SALPKQCGLAN   73 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBSS--SCCCCCHHHHHHHTT-CC---HHHHHTTTTCHHHHHHTB--CHHHH-HHHHHHTTCSC
T ss_pred             chHHhHHHhHhhCHHHHcCC--CCCCCCHHHHHHHHh-cC---cCCcCcccCCcchhhcCc--CHHHH-HHHHHHcCCCC
Confidence            46777777888998886210  013567789999998 44   389999887   333454  43333 45778999988


Q ss_pred             CC
Q 033023          123 PA  124 (129)
Q Consensus       123 P~  124 (129)
                      |.
T Consensus        74 p~   75 (77)
T 2rkn_A           74 AP   75 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=96.02  E-value=0.00051  Score=44.91  Aligned_cols=60  Identities=27%  Similarity=0.566  Sum_probs=43.9

Q ss_pred             ccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCC
Q 033023           54 KLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIP  123 (129)
Q Consensus        54 kL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P  123 (129)
                      +|..|...+.    -|.++..+||.-|++     ...|+|..+|...++..||.+.+ ..|...||..+|
T Consensus         7 ~L~pC~~~v~----~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A-~~Lp~~Cgv~~P   66 (69)
T 1l6h_A            7 QLTVCTGAIA----GGARPTAACCSSLRA-----QQGCFCQFAKDPRYGRYVNSPNA-RKAVSSCGIALP   66 (69)
T ss_dssp             THHHHHHHHT----TCCSTTHHHHHHHHH-----HHHHHHHHTTCSSHHHHTTTTTG-GGCCCCCSSCSC
T ss_pred             hcccCHHHHc----CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHH-HHHHHHcCCCCC
Confidence            5778887752    244677789999985     48899999987656545665555 446789999987

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=92.82  E-value=0.006  Score=41.66  Aligned_cols=67  Identities=19%  Similarity=0.398  Sum_probs=44.8

Q ss_pred             cccccccccccccceeeeCCCCCCCccchhcCCccc-----h-hhHHHHHHhhhcccceeccccchHHHHHhhcCCCCC
Q 033023           51 NTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV-----E-AALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIP  123 (129)
Q Consensus        51 d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~-----~-AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P  123 (129)
                      ...+|.-|.+.+.    -|.++..+||.-+++|...     | -+.|||...++.-++ .||.+.+ ..|...||-.+|
T Consensus         7 v~~~L~pCl~y~~----~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A-~~LP~~Cgv~~p   79 (92)
T 2alg_A            7 VSSSLAPCIPYVR----GGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNA-AALPGKCGVSIP   79 (92)
T ss_dssp             HHHHHGGGHHHHH----HCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHH-HHHHHHTTCCCS
T ss_pred             HHHhccCcHHHHc----CCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHH-HHHHHHcCCCCC
Confidence            3447788888863    1234556899999998631     2 157999876666563 4554444 557889999877

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=91.87  E-value=0.024  Score=38.53  Aligned_cols=70  Identities=24%  Similarity=0.466  Sum_probs=44.7

Q ss_pred             CCccccccccccccccceeeeCCCCCCCccchhcCCccc-----h-hhHHHHHHhhhcccceeccccchHHHHHhhcCCC
Q 033023           48 CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV-----E-AALCLCLAIKANVLAIELNWPTNIGLILSLCNRP  121 (129)
Q Consensus        48 CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~-----~-AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~  121 (129)
                      |-....+|.-|.+.+.    -|.+|..+||.-+++|.+.     | -+.|+|..-.+.-++ .||...+ ..|...||..
T Consensus         3 C~~v~~~L~pCl~yv~----~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~-~in~~~A-~~LP~~Cgv~   76 (91)
T 1siy_A            3 CGQVQGNLAQCIGFLQ----KGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GINPNNA-EALPGKCGVN   76 (91)
T ss_dssp             TTTTHHHHHHHHHHHT----SCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCS-SCCHHHH-HHHHHHHTCC
T ss_pred             HHHHHHhccCcHHHHh----CCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccC-CcCHHHH-HHHHHHcCCC
Confidence            5555567888888863    1234667899999998643     3 268999732222232 4554444 4578899998


Q ss_pred             CC
Q 033023          122 IP  123 (129)
Q Consensus       122 ~P  123 (129)
                      +|
T Consensus        77 ~p   78 (91)
T 1siy_A           77 IP   78 (91)
T ss_dssp             CS
T ss_pred             CC
Confidence            76

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=88.15  E-value=0.048  Score=37.12  Aligned_cols=71  Identities=30%  Similarity=0.486  Sum_probs=44.9

Q ss_pred             CCccccccccccccccceeeeCCCCCCCccchhcCCcc---chh---hHHHHHHhhhcccceeccccchHHHHHhhcCCC
Q 033023           48 CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGE---VEA---ALCLCLAIKANVLAIELNWPTNIGLILSLCNRP  121 (129)
Q Consensus        48 CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d---~~A---A~CLC~aikanvLgi~~~~pv~l~~lln~CGk~  121 (129)
                      |-....+|.-|.+.+.-   -+.+|..+||.-+++|.+   ..+   +.|+|....+.-++ .||...+ ..|-..||-.
T Consensus         4 C~~v~~~L~pCl~y~~~---~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A-~~LP~~C~v~   78 (93)
T 1afh_A            4 CGQVASAIAPCISYARG---QGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNA-ASIPSKCGVS   78 (93)
T ss_dssp             SHHHHHHHGGGHHHHTT---SCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHH-HHHHHHHHCC
T ss_pred             hHHHHHhccCcHHHHcC---CCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHH-HHHHHHcCCC
Confidence            44445578888888631   123356689999999853   222   68999765554443 3444443 4577899988


Q ss_pred             CC
Q 033023          122 IP  123 (129)
Q Consensus       122 ~P  123 (129)
                      +|
T Consensus        79 ~p   80 (93)
T 1afh_A           79 IP   80 (93)
T ss_dssp             CS
T ss_pred             CC
Confidence            76

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=87.95  E-value=0.028  Score=38.16  Aligned_cols=66  Identities=24%  Similarity=0.403  Sum_probs=41.5

Q ss_pred             ccccccccccccceeeeCCCCCCCccchhcCCccc---h---hhHHHHHHhhhcccceeccccchHHHHHhhcCCCCC
Q 033023           52 TLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV---E---AALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIP  123 (129)
Q Consensus        52 ~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~---~---AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P  123 (129)
                      ..+|.-|.+.+.    -|.++..+||.-+++|.+.   .   -+.|+|..-.+.-++ .+|...+ ..|...||-.+|
T Consensus         7 ~~~L~pCl~y~~----~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A-~~LP~~C~v~~p   78 (90)
T 1bwo_A            7 DSLVRPCLSYVQ----GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNA-RSIPPKCGVNLP   78 (90)
T ss_dssp             HHHHGGGHHHHT----TCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT-TCCHHHH-HTHHHHHTCCCS
T ss_pred             HHhhcccHHHHc----CCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC-CcCHHHH-HHHHHHcCCCCC
Confidence            446778888863    1223667899999998732   1   268999433333332 3454433 557789999876

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=81.96  E-value=0.46  Score=32.44  Aligned_cols=71  Identities=25%  Similarity=0.418  Sum_probs=45.4

Q ss_pred             cccccccccccceeeeCCCCCCCccchhcCCccc----hhhHHHHHHhhhcccce-eccccchHHHHHhhcCCCCC----
Q 033023           53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV----EAALCLCLAIKANVLAI-ELNWPTNIGLILSLCNRPIP----  123 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~----~AA~CLC~aikanvLgi-~~~~pv~l~~lln~CGk~~P----  123 (129)
                      ..|.-|.+++.    -|..+..+||.=+++|.+.    +--.|+|..||...-++ .+|..- ...|-..||-++|    
T Consensus         9 ~~L~pCl~Yv~----g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~-a~~LP~~CgV~~p~~Is   83 (93)
T 2ljo_A            9 SDLSPCLTYLT----GGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNN-AAALPGKCGVNIPYKIS   83 (93)
T ss_dssp             HHHHHHHHHHT----TSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHH-HHHHHHHHTCCCSSCCS
T ss_pred             HHHHhHHHHHc----CCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHH-HHhhhHhcCCCCCCCCC
Confidence            35666777652    1223567899988888653    23478888888654332 344333 3557889999988    


Q ss_pred             CCCcc
Q 033023          124 AGFKC  128 (129)
Q Consensus       124 ~gf~C  128 (129)
                      ..+.|
T Consensus        84 ~~~dC   88 (93)
T 2ljo_A           84 TTTNC   88 (93)
T ss_dssp             TTCCG
T ss_pred             CCCCC
Confidence            56666

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	129
d1hypa_	75	a.52.1.1 (A:) Soybean hydrophobic protein {Soybean	5e-16

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]} Length = 75

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 65.5 bits (160), Expect = 5e-16
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 54  KLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGL 113
            L  C  +LG ++         CCA++GGLG++EA +CLC+ ++A  +   LN   N+ L
Sbjct: 5   DLSICLNILGGSL----GTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQL 57

Query: 114 ILSLCNRPIPAGFKC 128
           IL+ C R  P+   C
Sbjct: 58  ILNSCGRSYPSNATC 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	129
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	99.96
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	92.45
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	92.42
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	90.63
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	87.91

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.96  E-value=3.5e-31  Score=179.57  Aligned_cols=72  Identities=42%  Similarity=0.936  Sum_probs=65.1

Q ss_pred             CCCccccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCCCC
Q 033023           47 YCPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGF  126 (129)
Q Consensus        47 ~CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~gf  126 (129)
                      +||    |||+|+||||..    .++.++||++|+||+|+|||+||||+|||++  + +|+||++++++|+|||++|+||
T Consensus         2 tCP----Klg~C~nvLg~~----~~~~~~CC~Ll~GL~dleAAvCLCtaika~~--l-lnvpv~l~llln~Cgk~~P~gF   70 (75)
T d1hypa_           2 SCP----DLSICLNILGGS----LGTVDDCCALIGGLGDIEAIVCLCIQLRALG--I-LNLNRNLQLILNSCGRSYPSNA   70 (75)
T ss_dssp             CSC----CCGGGGGGGGTC----CTTHHHHHHHHHTSCHHHHHHHHHHHHHHHT--C-SCHHHHHHHHHHHTTCSSCCCC
T ss_pred             CCC----chhhHHHHhcCc----cCCCCCcchHHhhHHHHHHHHHHHHHHHHhh--h-ccccchHHHHHHHcCCcCcCCC
Confidence            799    899999999822    2567899999999999999999999999954  4 8899999999999999999999


Q ss_pred             ccC
Q 033023          127 KCA  129 (129)
Q Consensus       127 ~C~  129 (129)
                      +||
T Consensus        71 ~CP   73 (75)
T d1hypa_          71 TCP   73 (75)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            996

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=92.45  E-value=0.018  Score=36.67  Aligned_cols=64  Identities=23%  Similarity=0.511  Sum_probs=49.5

Q ss_pred             cccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCC
Q 033023           51 NTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        51 d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~  124 (129)
                      |..+|..|+..+    .-|.++...||.-+.     |---|||.=+|.-.++--|+-| +-+-+++.||..+|.
T Consensus         3 ~p~~L~~C~~Ai----~~g~~PS~~CC~kLk-----eQ~~ClC~Y~kdP~~~~yv~sp-narkv~~aCgvp~P~   66 (67)
T d1tuka1           3 QASQLAVCASAI----LSGAKPSGECCGNLR-----AQQGCFCQYAKDPTYGQYIRSP-HARDTLTSCGLAVPH   66 (67)
T ss_dssp             CGGGGGGGHHHH----HHCCCCCHHHHHHHH-----HHGGGHHHHTTCTTTHHHHTSH-HHHHHHHHTTCCCCC
T ss_pred             ChhhccccHHHH----hcCCCCcHHHHHHHH-----hcCCccceecCCccHHHHcCCH-HHHHHHHhcCCCCCC
Confidence            345789999874    457788899999885     4457999999988877445544 358889999999884

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.42  E-value=0.0054  Score=40.41  Aligned_cols=77  Identities=25%  Similarity=0.461  Sum_probs=51.0

Q ss_pred             CCccccccccccccccceeeeCCCCCCCccchhcCCccc----hhhHHHHHHhhhcccce-eccccchHHHHHhhcCCCC
Q 033023           48 CPTNTLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV----EAALCLCLAIKANVLAI-ELNWPTNIGLILSLCNRPI  122 (129)
Q Consensus        48 CP~d~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~----~AA~CLC~aikanvLgi-~~~~pv~l~~lln~CGk~~  122 (129)
                      |..-..+|.-|.++|.   .-+..|.++||.-+++|.+.    +.-.|+|.-||...-+. .+|.. .+..|-..||-.+
T Consensus         4 C~~v~~~l~pCl~Ylt---g~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~-ra~~LP~~C~v~l   79 (93)
T d1fk5a_           4 CGQVASAIAPCISYAR---GQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAG-NAASIPSKCGVSI   79 (93)
T ss_dssp             HHHHHHHHGGGHHHHT---TCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHH-HHHHHHHHTTCCC
T ss_pred             HHHHHHHhhhhHHHHh---CCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHH-HHHhhhHhcCCCC
Confidence            4433457788888872   11223567899999998873    34578888888765332 34433 4567888999988


Q ss_pred             C----CCCcc
Q 033023          123 P----AGFKC  128 (129)
Q Consensus       123 P----~gf~C  128 (129)
                      |    ..+.|
T Consensus        80 ~~pis~~~dC   89 (93)
T d1fk5a_          80 PYTISTSTDC   89 (93)
T ss_dssp             SSCCSTTCCG
T ss_pred             CCCCCCCCCC
Confidence            7    56666

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=90.63  E-value=0.011  Score=38.71  Aligned_cols=71  Identities=27%  Similarity=0.484  Sum_probs=48.8

Q ss_pred             cccccccccccceeeeCCCCCCCccchhcCCccc----hhhHHHHHHhhhcccce-eccccchHHHHHhhcCCCCC----
Q 033023           53 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEV----EAALCLCLAIKANVLAI-ELNWPTNIGLILSLCNRPIP----  123 (129)
Q Consensus        53 lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~----~AA~CLC~aikanvLgi-~~~~pv~l~~lln~CGk~~P----  123 (129)
                      .+|.-|.+++.    -|..+.++||.-+++|.+.    +.-.|+|..+|...-++ .+|.. ....|-..||-++|    
T Consensus         8 ~~l~pCl~Yl~----g~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~-ra~~LP~~C~v~~p~pis   82 (91)
T d1mida_           8 SKMKPCLTYVQ----GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLN-NAASIPSKCNVNVPYTIS   82 (91)
T ss_dssp             HHHGGGHHHHT----TCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHH-HHHHHHHHTTCCCCSCCC
T ss_pred             HHHHhhHHHHc----CCCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHH-HHHhchHhcCCCCCCCCC
Confidence            46777888763    1234667899999999863    34579999888765332 34433 35678889999988    


Q ss_pred             CCCcc
Q 033023          124 AGFKC  128 (129)
Q Consensus       124 ~gf~C  128 (129)
                      ..+.|
T Consensus        83 ~~~dC   87 (91)
T d1mida_          83 PDIDC   87 (91)
T ss_dssp             TTCCG
T ss_pred             CCCCC
Confidence            66766

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=87.91  E-value=0.022  Score=36.34  Aligned_cols=63  Identities=27%  Similarity=0.529  Sum_probs=48.2

Q ss_pred             ccccccccccccceeeeCCCCCCCccchhcCCccchhhHHHHHHhhhcccceeccccchHHHHHhhcCCCCCC
Q 033023           52 TLKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPA  124 (129)
Q Consensus        52 ~lkL~vCa~vL~~~~~~g~p~~~~CC~li~gL~d~~AA~CLC~aikanvLgi~~~~pv~l~~lln~CGk~~P~  124 (129)
                      ..+|..|+..+    .-|.++...||.-+..     =--|||.=+|.-.++--|+-|- -+-+++.||..+|.
T Consensus         5 p~~L~~C~~ai----~~g~~PS~~CC~kLke-----Q~~ClC~Y~k~P~~~~yv~spn-arkv~~aCgvp~P~   67 (69)
T d1l6ha_           5 AGQLTVCTGAI----AGGARPTAACCSSLRA-----QQGCFCQFAKDPRYGRYVNSPN-ARKAVSSCGIALPT   67 (69)
T ss_dssp             TTTHHHHHHHH----TTCCSTTHHHHHHHHH-----HHHHHHHHTTCSSHHHHTTTTT-GGGCCCCCSSCSCC
T ss_pred             hhhccccHHHH----hCCCCCcHHHHHHHHh-----cCCccceeccCccHHHHcCCHH-HHHHHHhcCCCCCC
Confidence            45788898763    4467888899998864     4579999999887775455443 47888999999885