Citrus Sinensis ID: 033253

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK
Secondary Structure (PSIPRED)
ccccccccccccHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
megndnntqkDYYKILEVDYDATDEKIRLNYRKLALkwhpdkhngdsaVTAKFQEINEAYavlsdpdkrldydftgiyeiDKYTLREYLARFKGMILTCnglgishtsmwsqqltetddfadk
Flexible Loop (DISEMBL)
megndnntqkdyyKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYavlsdpdkrldYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHtsmwsqqltetddfadk
Low Complexity Region (SEG)
MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK
Disordered region (IsUnstruct)
**********DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMW*************
Disordered Region (DISOPRED)
***********YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGI*******************
Disordered Region (DISEMBL)
********QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK
Disordered Region (DISPRO)
******NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETD*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
A3DF24	386	Chaperone protein DnaJ OS	yes	no	0.552	0.176	0.588	5e-17
Q21CI1	379	Chaperone protein DnaJ OS	yes	no	0.577	0.187	0.507	2e-16
Q75WD2	380	Chaperone protein DnaJ OS	yes	no	0.560	0.181	0.550	3e-16
Q5SLW9	350	Chaperone protein DnaJ 1	yes	no	0.520	0.182	0.593	4e-16
P50027	332	DnAJ-like protein slr0093	N/A	no	0.560	0.207	0.579	4e-16
Q72GN6	350	Chaperone protein DnaJ OS	yes	no	0.520	0.182	0.593	4e-16
P30725	374	Chaperone protein DnaJ OS	yes	no	0.544	0.179	0.537	7e-16
Q9UXR9	387	Chaperone protein DnaJ OS	N/A	no	0.552	0.175	0.579	8e-16
O08356	379	Chaperone protein DnaJ OS	N/A	no	0.577	0.187	0.507	1e-15
B3Q973	379	Chaperone protein DnaJ OS	yes	no	0.577	0.187	0.507	1e-15

>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/68 (58%), Positives = 50/68 (73%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY+IL VD  A+D +I+  YRKLA ++HPD + GD A  AKF+EINEAY VLSDP K
Sbjct: 4  KRDYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQK 63

Query: 69 RLDYDFTG 76
          R  YD  G
Sbjct: 64 RARYDQFG 71

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Clostridium thermocellum (strain ATCC 27405 / DSM 1237) (taxid: 203119)

>sp|Q21CI1|DNAJ_RHOPB Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaJ PE=3 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 51/71 (71%)

Query: 6  NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 65
          + T++ YY+ LEVD  A D  ++  +RKLA+KWHPD++ GD++  ++F+EINEAY VL D
Sbjct: 2  STTKRCYYETLEVDRSADDSSLKAAFRKLAMKWHPDRNPGDASSESRFKEINEAYEVLKD 61

Query: 66 PDKRLDYDFTG 76
           DKR  YD  G
Sbjct: 62 GDKRAAYDRYG 72

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Rhodopseudomonas palustris (strain BisB18) (taxid: 316056)

>sp|Q75WD2|DNAJ_ACEP3 Chaperone protein DnaJ OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          TQ DYY ILEV   AT ++++ +YRKLA+K+HPD++ GD A  AKF+EIN+AY +L D  
Sbjct: 3  TQLDYYAILEVSRTATADELKKSYRKLAMKYHPDRNPGDDAAEAKFKEINQAYDILKDEQ 62

Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 63 KRAAYDQYG 71

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) (taxid: 634452)

>sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ1 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 48/64 (75%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY IL V  +A+ E+I+  YR+LALK+HPD++ GD     +F+EINEAYAVLSDP KR
Sbjct: 2  KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKR 61

Query: 70 LDYD 73
            YD
Sbjct: 62 AAYD 65

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (taxid: 300852)

>sp|P50027|DNAJH_SYNY3 DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0093 PE=4 SV=1

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 51/69 (73%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY+IL V   A++ +I+  +RKLALK+HPDK+ GD A   KF+EI+EAY VLSDP+KR
Sbjct: 7  KDYYQILGVTKTASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKR 66

Query: 70 LDYDFTGIY 78
            YD  G Y
Sbjct: 67 QKYDQFGRY 75

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q72GN6|DNAJ_THET2 Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 48/64 (75%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY IL V  +A+ E+I+  YR+LALK+HPD++ GD     +F+EINEAYAVLSDP KR
Sbjct: 2  KDYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKR 61

Query: 70 LDYD 73
            YD
Sbjct: 62 AAYD 65

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (taxid: 262724)

>sp|P30725|DNAJ_CLOAB Chaperone protein DnaJ OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=dnaJ PE=2 SV=2

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 52/67 (77%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY++L ++  A+D++I+  +RKLA+K+HPDK+ G+     KF+EINEAY VLSDPDK+
Sbjct: 4  KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKK 63

Query: 70 LDYDFTG 76
           +YD  G
Sbjct: 64 ANYDRFG 70

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562)

>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          T +DYY+IL +  DAT E I+ +YRKLALK+HPD+ N +     KF+EI+EAYAVLSDP+
Sbjct: 3  TTRDYYEILGLSRDATPEDIKKSYRKLALKYHPDR-NKEPGAEEKFKEISEAYAVLSDPE 61

Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 62 KRAQYDRFG 70

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Methanosarcina thermophila (taxid: 2210)

>sp|O08356|DNAJ_RHOS7 Chaperone protein DnaJ OS=Rhodopseudomonas sp. (strain No.7) GN=dnaJ PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 49/71 (69%)

Query: 6  NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 65
          + T++ YY+ LEV+ +A D  ++  +RKLA+KWHPD++ GD     KF+EINEAY VL D
Sbjct: 2  STTKRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKD 61

Query: 66 PDKRLDYDFTG 76
           DKR  YD  G
Sbjct: 62 GDKRAAYDRYG 72

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Rhodopseudomonas sp. (strain No.7) (taxid: 269092)

>sp|B3Q973|DNAJ_RHOPT Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaJ PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 49/71 (69%)

Query: 6  NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 65
          + T++ YY+ LEV+ +A D  ++  +RKLA+KWHPD++ GD     KF+EINEAY VL D
Sbjct: 2  STTKRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQCEIKFKEINEAYEVLKD 61

Query: 66 PDKRLDYDFTG 76
           DKR  YD  G
Sbjct: 62 GDKRAAYDRYG 72

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
225454698	123	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.804	3e-53
224146074	110	predicted protein [Populus trichocarpa]	0.894	1.0	0.872	3e-51
224124104	110	predicted protein [Populus trichocarpa]	0.894	1.0	0.863	5e-50
15237385	128	chaperone DnaJ-domain containing protein	0.951	0.914	0.805	2e-48
297811807	139	DNAJ heat shock N-terminal domain-contai	0.951	0.841	0.805	2e-48
255558097	205	conserved hypothetical protein [Ricinus	0.804	0.482	0.929	1e-47
351724273	135	uncharacterized protein LOC100527491 [Gl	0.967	0.881	0.773	1e-47
297828754	130	predicted protein [Arabidopsis lyrata su	0.967	0.915	0.75	1e-46
388503630	134	unknown [Medicago truncatula]	0.918	0.843	0.778	5e-46
388492874	134	unknown [Lotus japonicus] gi|388502822|g	0.951	0.873	0.722	2e-43

>gi|225454698|ref|XP_002271034.1| PREDICTED: uncharacterized protein LOC100244367 [Vitis vinifera] gi|297737272|emb|CBI26473.3| unnamed protein product [Vitis vinifera]

 Score =  212 bits (539), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 99/123 (80%), Positives = 111/123 (90%)

Query: 1   MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
           ME ND++T KDYYK+LEVDYDAT+EKI+LNYR+LALKWHPDKH GD+AVT KFQ INEAY
Sbjct: 1   MESNDSSTHKDYYKVLEVDYDATNEKIKLNYRRLALKWHPDKHKGDNAVTEKFQLINEAY 60

Query: 61  AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDF 120
            VLSDP KRLDYD TG YEIDKYTLREYL RFKGMILTCNGLGISHTS+W+QQL +T+D 
Sbjct: 61  KVLSDPAKRLDYDLTGNYEIDKYTLREYLTRFKGMILTCNGLGISHTSIWTQQLMDTNDH 120

Query: 121 ADK 123
           +DK
Sbjct: 121 SDK 123

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146074|ref|XP_002325870.1| predicted protein [Populus trichocarpa] gi|222862745|gb|EEF00252.1| predicted protein [Populus trichocarpa]

 Score =  205 bits (521), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 96/110 (87%), Positives = 101/110 (91%)

Query: 1   MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
           MEGN+N TQKDYYKILEVDYDATDEKIRLNYR+LALKWHPDKH GD+AVT KFQEINEAY
Sbjct: 1   MEGNENTTQKDYYKILEVDYDATDEKIRLNYRRLALKWHPDKHKGDNAVTTKFQEINEAY 60

Query: 61  AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMW 110
            VL DPDKR DYD TGIYEIDKYTLREYL RFKGMILTCNGLGI +TS+W
Sbjct: 61  NVLRDPDKRFDYDLTGIYEIDKYTLREYLTRFKGMILTCNGLGIGNTSIW 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124104|ref|XP_002319246.1| predicted protein [Populus trichocarpa] gi|222857622|gb|EEE95169.1| predicted protein [Populus trichocarpa]

 Score =  201 bits (511), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 101/110 (91%)

Query: 1   MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
           ME N+N TQKDYYKILEVDYDATDEKIRLNYR LALKWHPDKH GDSAVTAKFQ+INEAY
Sbjct: 1   MEDNENTTQKDYYKILEVDYDATDEKIRLNYRMLALKWHPDKHLGDSAVTAKFQDINEAY 60

Query: 61  AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMW 110
            VLSDP KR +YD TG+YEIDKYT+REYLARFKGMILTCNGLGIS+TS W
Sbjct: 61  KVLSDPAKRFEYDLTGVYEIDKYTVREYLARFKGMILTCNGLGISNTSTW 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237385|ref|NP_197168.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|14326539|gb|AAK60314.1|AF385723_1 AT5g16650/MTG13_10 [Arabidopsis thaliana] gi|10176974|dbj|BAB10192.1| unnamed protein product [Arabidopsis thaliana] gi|21553806|gb|AAM62899.1| unknown [Arabidopsis thaliana] gi|23505921|gb|AAN28820.1| At5g16650/MTG13_10 [Arabidopsis thaliana] gi|332004939|gb|AED92322.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 100/118 (84%), Gaps = 1/118 (0%)

Query: 1   MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
           ME ND +  KDYYKILEVDYDAT+E IRLNYRKLALKWHPDKH GDSA T KFQEINEAY
Sbjct: 1   MEDNDKSPPKDYYKILEVDYDATEELIRLNYRKLALKWHPDKHKGDSAATEKFQEINEAY 60

Query: 61  AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSM-WSQQLTET 117
            VL DP KR +YDFTGIYEI KYTLREYLARFKGMILTCNGLGIS +S  W+ QL ET
Sbjct: 61  NVLMDPAKRFEYDFTGIYEIHKYTLREYLARFKGMILTCNGLGISQSSSPWTHQLAET 118

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811807|ref|XP_002873787.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319624|gb|EFH50046.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 100/118 (84%), Gaps = 1/118 (0%)

Query: 1   MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
           ME ND +  KDYYKILEVDYDAT+E IRLNYRKLALKWHPDKH GDSA T KFQEINEAY
Sbjct: 1   MEDNDKSPPKDYYKILEVDYDATEELIRLNYRKLALKWHPDKHKGDSAATEKFQEINEAY 60

Query: 61  AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSM-WSQQLTET 117
            VL DP KR +YDFTGIYEI KYTLREYLARFKGMILTCNGLGIS +S  W+ QL ET
Sbjct: 61  NVLMDPAKRFEYDFTGIYEIHKYTLREYLARFKGMILTCNGLGISQSSSPWTHQLAET 118

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558097|ref|XP_002520077.1| conserved hypothetical protein [Ricinus communis] gi|223540841|gb|EEF42401.1| conserved hypothetical protein [Ricinus communis]

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/99 (92%), Positives = 92/99 (92%)

Query: 11  DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
           DYYKILEVDYDATDEKIR NY KLALKWHPDKH GDSAVTAKFQEINEAY VLSDP KR 
Sbjct: 5   DYYKILEVDYDATDEKIRFNYLKLALKWHPDKHQGDSAVTAKFQEINEAYGVLSDPAKRS 64

Query: 71  DYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSM 109
           DYDFTGIYEIDKYTL EYLARFKGMILTCNGLGISHTSM
Sbjct: 65  DYDFTGIYEIDKYTLGEYLARFKGMILTCNGLGISHTSM 103

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724273|ref|NP_001236796.1| uncharacterized protein LOC100527491 [Glycine max] gi|255632470|gb|ACU16585.1| unknown [Glycine max]

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 101/119 (84%)

Query: 5   DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 64
           DN   KDYYK+LEV+YDATDE I+LNYR+LALKWHPDKH GDSAVTAKFQEINEAY VLS
Sbjct: 17  DNTNPKDYYKVLEVEYDATDENIKLNYRRLALKWHPDKHGGDSAVTAKFQEINEAYNVLS 76

Query: 65  DPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK 123
           DP KRLDYD TGI EI+KY+L+EYLARFK MILTCNGLGI+ T  WSQQL E  +  DK
Sbjct: 77  DPTKRLDYDLTGICEIEKYSLQEYLARFKSMILTCNGLGINQTDRWSQQLIENFESLDK 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828754|ref|XP_002882259.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328099|gb|EFH58518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 102/120 (85%), Gaps = 1/120 (0%)

Query: 5   DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 64
           DNN  KDYYKILEVDYDAT+E I+++YRKLALKWHPDKHNGD+  T+KFQEINEAY VL 
Sbjct: 3   DNNPPKDYYKILEVDYDATEEMIKVSYRKLALKWHPDKHNGDTVATSKFQEINEAYNVLM 62

Query: 65  DPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSM-WSQQLTETDDFADK 123
           DP  R +YD TGIYEI KYTLREYLARFKGMILTCNGLGISH+S  W+QQL E ++  D+
Sbjct: 63  DPALRFEYDLTGIYEIHKYTLREYLARFKGMILTCNGLGISHSSSPWTQQLAEGNNTTDE 122

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503630|gb|AFK39881.1| unknown [Medicago truncatula]

 Score =  187 bits (476), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/113 (77%), Positives = 99/113 (87%)

Query: 4   NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVL 63
           N+NN  KDYYK+LE++YDATDE IRLNYR+LALKWHPDKH  DSAVTAKFQEINEAY VL
Sbjct: 15  NNNNKPKDYYKVLEIEYDATDEDIRLNYRRLALKWHPDKHKDDSAVTAKFQEINEAYNVL 74

Query: 64  SDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTE 116
           +DP KRLDYD TG  EI+KY+L+EYLARFKGMILTCNGLGI++   WSQQL E
Sbjct: 75  NDPAKRLDYDLTGACEIEKYSLQEYLARFKGMILTCNGLGINNEDRWSQQLIE 127

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492874|gb|AFK34503.1| unknown [Lotus japonicus] gi|388502822|gb|AFK39477.1| unknown [Lotus japonicus]

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 99/119 (83%), Gaps = 2/119 (1%)

Query: 7   NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKH--NGDSAVTAKFQEINEAYAVLS 64
           N  KDYYK+LEVDYDATDE I+L+YR+LA+KWHPDKH  +GD  VTAKFQEINEAY VLS
Sbjct: 16  NPNKDYYKVLEVDYDATDEIIKLSYRRLAMKWHPDKHKGDGDGDVTAKFQEINEAYNVLS 75

Query: 65  DPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMWSQQLTETDDFADK 123
           DP KRLDYD TG  E++KY+L+EYLARFKGMILTCNGLGI+H   WSQ L E  + AD+
Sbjct: 76  DPAKRLDYDLTGTCEVEKYSLQEYLARFKGMILTCNGLGINHADRWSQHLIENFESADE 134

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
TAIR|locus:2174170	128	AT5G16650 [Arabidopsis thalian	0.951	0.914	0.805	1.6e-47
TAIR|locus:505006286	119	AT2G33735 [Arabidopsis thalian	0.845	0.873	0.490	2.9e-23
UNIPROTKB|Q74H78	294	GSU0014 "DnaJ-related molecula	0.552	0.231	0.588	1.4e-16
TIGR_CMR|GSU_0014	294	GSU_0014 "phage prohead protea	0.552	0.231	0.588	1.4e-16
TIGR_CMR|NSE_0535	379	NSE_0535 "chaperone protein Dn	0.552	0.179	0.529	3.5e-16
TAIR|locus:2097638	323	AT3G08910 [Arabidopsis thalian	0.536	0.204	0.567	1.2e-15
UNIPROTKB|Q0IIE8	379	DNAJB14 "DnaJ homolog subfamil	0.560	0.182	0.542	1.3e-15
UNIPROTKB|Q8TBM8	379	DNAJB14 "DnaJ homolog subfamil	0.560	0.182	0.542	1.3e-15
TAIR|locus:2121368	348	AT4G28480 [Arabidopsis thalian	0.536	0.189	0.567	1.8e-15
TAIR|locus:2179127	335	AT5G01390 [Arabidopsis thalian	0.536	0.197	0.552	2.6e-15

TAIR|locus:2174170 AT5G16650 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 95/118 (80%), Positives = 100/118 (84%)

Query:     1 MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAY 60
             ME ND +  KDYYKILEVDYDAT+E IRLNYRKLALKWHPDKH GDSA T KFQEINEAY
Sbjct:     1 MEDNDKSPPKDYYKILEVDYDATEELIRLNYRKLALKWHPDKHKGDSAATEKFQEINEAY 60

Query:    61 AVLSDPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSM-WSQQLTET 117
              VL DP KR +YDFTGIYEI KYTLREYLARFKGMILTCNGLGIS +S  W+ QL ET
Sbjct:    61 NVLMDPAKRFEYDFTGIYEIHKYTLREYLARFKGMILTCNGLGISQSSSPWTHQLAET 118

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:505006286 AT2G33735 [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 52/106 (49%), Positives = 74/106 (69%)

Query:     5 DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 64
             D    KD+YK+LE++ DA+D++IR ++ +LALKWHPDK   + + T++FQEINEAY VLS
Sbjct:    16 DFEDYKDHYKVLELNCDASDDEIRSSFIRLALKWHPDKFKEEDSATSRFQEINEAYQVLS 75

Query:    65 DPDKRLDYDFTGIYEIDKYTLREYLARFKGMILTCNGLGISHTSMW 110
             DP  R +YD   +  I ++   E L  +K +ILTCNGLG+ H  +W
Sbjct:    76 DPIARQEYDKKRMRRIYEHNT-ELLNEYKELILTCNGLGVKHY-LW 119

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q74H78 GSU0014 "DnaJ-related molecular chaperone" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 40/68 (58%), Positives = 50/68 (73%)

Query:     9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
             Q DYY+ L +   AT+E+I+  YRKLA+ +HPDK+ GD+A   KF+EINEAYAVLSDP K
Sbjct:     3 QHDYYETLGLKKGATEEEIKKAYRKLAITYHPDKNPGDAAAEEKFKEINEAYAVLSDPQK 62

Query:    69 RLDYDFTG 76
             R  YD  G
Sbjct:    63 RAQYDQFG 70

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_0014 GSU_0014 "phage prohead protease, HK97 family/dnaJ domain protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 40/68 (58%), Positives = 50/68 (73%)

Query:     9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
             Q DYY+ L +   AT+E+I+  YRKLA+ +HPDK+ GD+A   KF+EINEAYAVLSDP K
Sbjct:     3 QHDYYETLGLKKGATEEEIKKAYRKLAITYHPDKNPGDAAAEEKFKEINEAYAVLSDPQK 62

Query:    69 RLDYDFTG 76
             R  YD  G
Sbjct:    63 RAQYDQFG 70

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|NSE_0535 NSE_0535 "chaperone protein DnaJ" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]

 Score = 193 (73.0 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
 Identities = 36/68 (52%), Positives = 50/68 (73%)

Query:     9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
             +KDYY+IL V   A+ E+IR  Y+KLAL++HPD++ GD     KF+EI EAY+VLS+P+K
Sbjct:     5 KKDYYEILGVSRSASTEEIRKAYKKLALQYHPDRNKGDKEAAEKFKEIGEAYSVLSNPEK 64

Query:    69 RLDYDFTG 76
             +  YD  G
Sbjct:    65 KASYDQYG 72

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TAIR|locus:2097638 AT3G08910 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query:    11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKH-NGDSAVTAKFQEINEAYAVLSDPDKR 69
             DYYK+L+VD +A D+ ++  YRKLA+KWHPDK+ N      AKF++I+EAY VLSDP KR
Sbjct:     4 DYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63

Query:    70 LDYDFTG 76
               YD  G
Sbjct:    64 AIYDQYG 70

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q0IIE8 DNAJB14 "DnaJ homolog subfamily B member 14" [Bos taurus (taxid:9913)]

 Score = 188 (71.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query:     7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
             N  K+YY++L V  DA DE ++  YRKLALK+HPDK++   A  A F++I  AYAVLS+P
Sbjct:   104 NKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDA-FKKIGNAYAVLSNP 162

Query:    67 DKRLDYDFTG 76
             +KR  YD TG
Sbjct:   163 EKRKQYDLTG 172

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8TBM8 DNAJB14 "DnaJ homolog subfamily B member 14" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query:     7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
             N  K+YY++L V  DA DE ++  YRKLALK+HPDK++   A  A F++I  AYAVLS+P
Sbjct:   104 NKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDA-FKKIGNAYAVLSNP 162

Query:    67 DKRLDYDFTG 76
             +KR  YD TG
Sbjct:   163 EKRKQYDLTG 172

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2121368 AT4G28480 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 38/67 (56%), Positives = 48/67 (71%)

Query:    11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKH-NGDSAVTAKFQEINEAYAVLSDPDKR 69
             DYYK+L+VD  A D+ ++  YRKLA+KWHPDK+ N      AKF++I+EAY VLSDP KR
Sbjct:     4 DYYKVLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63

Query:    70 LDYDFTG 76
               YD  G
Sbjct:    64 AVYDQYG 70

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2179127 AT5G01390 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 37/67 (55%), Positives = 49/67 (73%)

Query:    11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKH-NGDSAVTAKFQEINEAYAVLSDPDKR 69
             D+YK+LEVD  A D++++  YRKLA+KWHPDK+ N      AKF++I+EAY VLSDP KR
Sbjct:     4 DFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKR 63

Query:    70 LDYDFTG 76
               Y+  G
Sbjct:    64 AIYEQYG 70

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00190466	hypothetical protein (110 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.02610008	hypothetical protein (132 aa)			•						0.504
	gw1.XIII.1526.1	annotation not avaliable (81 aa)			•						0.503
	gw1.I.6196.1	hypothetical protein (99 aa)			•						0.503
	grail3.0261001401	hypothetical protein (124 aa)			•						0.503
	eugene3.00860035	hypothetical protein (705 aa)			•						0.503
	fgenesh4_pg.C_scaffold_6803000001	hypothetical protein (161 aa)			•						0.502
	eugene3.00130164	hypothetical protein (660 aa)			•						0.502
	eugene3.00120231	hypothetical protein (668 aa)			•						0.502
	eugene3.00070571	hypothetical protein (172 aa)			•						0.502
	estExt_fgenesh4_pm.C_LG_I0291	SubName- Full=Putative uncharacterized protein; (666 aa)			•						0.502

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	123
pfam00226	63	pfam00226, DnaJ, DnaJ domain	9e-28
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-27
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-27
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-25
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-23
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	7e-23
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-22
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-22
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	2e-22
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-22
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-22
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-22
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-21
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	5e-21
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-20
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-20
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	2e-20
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	2e-20
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	2e-20
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	6e-20
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	9e-20
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	4e-19
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	3e-18
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	3e-18
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	5e-18
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	2e-17
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-16
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	4e-16
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-15
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-15
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	8e-15
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	1e-14
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	6e-14
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	9e-14
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	6e-13
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-10
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	1e-07
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	7e-06
PTZ00100	116	PTZ00100, PTZ00100, DnaJ chaperone protein; Provis	7e-06
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	1e-04
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	4e-04
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.001

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 96.4 bits (241), Expect = 9e-28
 Identities = 42/63 (66%), Positives = 50/63 (79%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          DYY+IL V  DA+DE+I+  YRKLALK+HPDK+ GD A   KF+EINEAY VLSDP+KR 
Sbjct: 1  DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 71 DYD 73
           YD
Sbjct: 61 IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  103 bits (260), Expect = 1e-27
 Identities = 34/66 (51%), Positives = 49/66 (74%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY++L V  +A++++I+  YRKLA+K+HPD++ GD     KF+EI EAY VLSDP 
Sbjct: 2  AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQ 61

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 62 KRAAYD 67

Length = 371

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  103 bits (260), Expect = 1e-27
 Identities = 39/67 (58%), Positives = 50/67 (74%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +DYY+IL V  DA++E+I+  YRKLA K+HPD++ GD     KF+EINEAY VLSDP+KR
Sbjct: 4  RDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKR 63

Query: 70 LDYDFTG 76
            YD  G
Sbjct: 64 AAYDQFG 70

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 97.3 bits (243), Expect = 2e-25
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          DYY+IL V  DA++E+I+  YRKLA K+HPD++  D     KF+EINEAY VLSDP+KR 
Sbjct: 1  DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRA 59

Query: 71 DYD 73
           YD
Sbjct: 60 QYD 62

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 93.3 bits (232), Expect = 1e-23
 Identities = 38/65 (58%), Positives = 49/65 (75%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          +KDYY+IL VD +AT+E+I+  YR+LA K+HPD + GD     KF+EINEAY +LSDP K
Sbjct: 4  KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQK 63

Query: 69 RLDYD 73
          R  YD
Sbjct: 64 RAQYD 68

Length = 386

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 83.7 bits (208), Expect = 7e-23
 Identities = 35/55 (63%), Positives = 41/55 (74%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 65
          DYY IL V  DA+DE+I+  YRKLALK+HPDK+  D     KF+EINEAY VLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 90.6 bits (225), Expect = 1e-22
 Identities = 34/65 (52%), Positives = 49/65 (75%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
           KDYY++L ++  A+D++I+  +RKLA+K+HPDK+ G+     KF+EINEAY VLSDP K
Sbjct: 3  SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQK 62

Query: 69 RLDYD 73
          +  YD
Sbjct: 63 KAQYD 67

Length = 380

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 90.3 bits (224), Expect = 1e-22
 Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          T +DYY+IL +  DA+ E I+  YRKLA+K+HPDK N +     KF+EI+EAYAVLSD +
Sbjct: 3  TTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDK-NKEPDAEEKFKEISEAYAVLSDAE 61

Query: 68 KRLDYDFTGIYEID 81
          KR  YD  G   ID
Sbjct: 62 KRAQYDRFGHAGID 75

Length = 377

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 82.7 bits (205), Expect = 2e-22
 Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAV-TAKFQEINEAYAVLSDPDK 68
           DYY+IL V  DA+ ++I+  YRKLALK+HPDK+ GD      KF+EINEAY VLSDP+K
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 89.5 bits (222), Expect = 2e-22
 Identities = 35/65 (53%), Positives = 48/65 (73%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          +KDYYK+L V  DAT+ +I+  YRKLA ++HPD + GD+    +F+EI+EAY VLSD  K
Sbjct: 8  EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 69 RLDYD 73
          R +YD
Sbjct: 68 RKEYD 72

Length = 389

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 89.3 bits (222), Expect = 3e-22
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +DYY +L V  +A+D +I+  YRKLA + HPD  N D     KF+EI+ AY VLSDP+KR
Sbjct: 3  RDYYGLLGVSRNASDAEIKRAYRKLARELHPDV-NPDEEAQEKFKEISVAYEVLSDPEKR 61

Query: 70 LDYDFTG 76
             D  G
Sbjct: 62 RIVDLGG 68

Length = 378

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 88.3 bits (219), Expect = 5e-22
 Identities = 36/69 (52%), Positives = 49/69 (71%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY+IL V  DA++E+I+ +YRKLA+K+HPD++ GD      F+E  EAY VLSDP 
Sbjct: 2  VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPK 61

Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 62 KRGIYDQYG 70

Length = 366

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 87.6 bits (217), Expect = 1e-21
 Identities = 35/66 (53%), Positives = 46/66 (69%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          DYY IL V   A+ E+I+  YRKLA+K+HPDK+ GD+    +F+E++EAY VLSD  KR 
Sbjct: 2  DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE 61

Query: 71 DYDFTG 76
           YD  G
Sbjct: 62 SYDRYG 67

Length = 391

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 85.9 bits (213), Expect = 5e-21
 Identities = 34/67 (50%), Positives = 47/67 (70%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          +KD+YK L V  DA+ E+I+  YRKLA + HPD + GD A   +F+ ++EA+ VLSDP K
Sbjct: 8  EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67

Query: 69 RLDYDFT 75
          R +YD T
Sbjct: 68 RKEYDET 74

Length = 392

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 84.8 bits (210), Expect = 1e-20
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           +KDYY+IL V  +AT E+I+  YR+LA K+HPD  N +     KF+EINEAY VLSDP+
Sbjct: 1  AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPD-FNKNPEAEEKFKEINEAYQVLSDPE 59

Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 60 KRKLYDQFG 68

Length = 382

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 84.9 bits (210), Expect = 1e-20
 Identities = 34/66 (51%), Positives = 46/66 (69%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY++L V   AT ++I+  YRK A+++HPDK+ GD     KF+E  EAY VLSDPD
Sbjct: 3  EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPD 62

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 63 KRSRYD 68

Length = 386

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 84.2 bits (208), Expect = 2e-20
 Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA-VTAKFQEINEAYAVLSDPDK 68
          KDYYKIL VD +A+ E I+  +R+LA KWHPD H G+ A    KF+EI+EAY VLSDP K
Sbjct: 3  KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQK 62

Query: 69 RLDYDFTG 76
          R  YD TG
Sbjct: 63 RRQYDQTG 70

Length = 365

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 84.1 bits (208), Expect = 2e-20
 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPD 67
          +KDYY+IL V  +AT E+I+  Y++L  +WHPD+H  +      KF+EI EAY VLSDP 
Sbjct: 3  KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQ 62

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 63 KRAMYD 68

Length = 369

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 84.0 bits (208), Expect = 2e-20
 Identities = 31/65 (47%), Positives = 46/65 (70%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          Q+DYY++L V  DA++++I+  YRKLAL++HPD++  +     KF+E  EAY VL D +K
Sbjct: 3  QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEK 62

Query: 69 RLDYD 73
          R  YD
Sbjct: 63 RARYD 67

Length = 373

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 82.9 bits (205), Expect = 6e-20
 Identities = 32/66 (48%), Positives = 45/66 (68%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY++L V   A  ++I+  YRKLALK+HPDK+  +      F+E+NEAY VLS+ D
Sbjct: 1  MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDD 60

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 61 KRRRYD 66

Length = 397

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 81.5 bits (201), Expect = 9e-20
 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY IL V  +A+ ++I+  ++KLA K+HPD  N       KF+EINEAY VLSDP+KR
Sbjct: 4  KDYYAILGVPKNASQDEIKKAFKKLARKYHPDV-NKSPGAEEKFKEINEAYTVLSDPEKR 62

Query: 70 LDYDFTG 76
            YD  G
Sbjct: 63 RIYDTYG 69

Length = 291

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 80.7 bits (199), Expect = 4e-19
 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          DYY++L V   A+ ++I+  YRKLALK+HPD+ N +     KF +INEAYAVLSD +KR 
Sbjct: 3  DYYELLGVSRTASADEIKSAYRKLALKYHPDR-NKEKGAAEKFAQINEAYAVLSDAEKRA 61

Query: 71 DYDFTG 76
           YD  G
Sbjct: 62 HYDRFG 67

Length = 371

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 78.6 bits (194), Expect = 3e-18
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
            +YY  L V  DA+ ++I+  YRKL+ K+HPD  N +     K++E+ EAY  LSDP K
Sbjct: 3  NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDI-NKEPGAEEKYKEVQEAYETLSDPQK 61

Query: 69 RLDYD 73
          R  YD
Sbjct: 62 RAAYD 66

Length = 380

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 78.1 bits (192), Expect = 3e-18
 Identities = 34/69 (49%), Positives = 45/69 (65%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +++ YY IL V   A DE+I+  YRKLA+K+HPDK+ G+     KF+E  EAY +L DP 
Sbjct: 2  SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPK 61

Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 62 KRQAYDQFG 70

Length = 372

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 77.3 bits (191), Expect = 5e-18
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          DYY+IL V  DA  ++++  YR+LA K+HPD  N +     +F+EIN AY VLSDP+ R 
Sbjct: 4  DYYEILGVSRDADKDELKRAYRRLARKYHPDV-NKEPGAEDRFKEINRAYEVLSDPETRA 62

Query: 71 DYD 73
           YD
Sbjct: 63 RYD 65

Length = 374

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 76.0 bits (187), Expect = 2e-17
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY++L VD +A  ++I+  YRKLA K+HPD  + +     KF+EI+EAYAVLSD +K
Sbjct: 4  KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDV-SEEEGAEEKFKEISEAYAVLSDDEK 62

Query: 69 RLDYD 73
          R  YD
Sbjct: 63 RQRYD 67

Length = 378

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY++L V   A+ ++I+  YRKL+ K+HPD  N +     KF+EI+EAY VLSD  K
Sbjct: 3  KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI-NKEEGADEKFKEISEAYEVLSDDQK 61

Query: 69 RLDYD 73
          R  YD
Sbjct: 62 RAQYD 66

Length = 376

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 72.4 bits (177), Expect = 4e-16
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 12 YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 71
          YY+ILEV+  +  E I+ +YRKLALK+HPD++ GD     KF+ INEAY VLSD  KR  
Sbjct: 5  YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 72 YDFTG 76
          YD  G
Sbjct: 65 YDRYG 69

Length = 369

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 71.4 bits (175), Expect = 1e-15
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +  Y++L +  D T  +I+  YRKLA+K HPDK  GD     KF+EI+ AY VLSDP+KR
Sbjct: 28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK-GGDP---EKFKEISRAYEVLSDPEKR 83

Query: 70 LDYDFTG 76
            YD  G
Sbjct: 84 KIYDEYG 90

Length = 421

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDK 68
           DYY+IL V  +A+ E+I+  YRKLALK+HPD++ GD      KF+EINEAY +LSDP++
Sbjct: 6  LDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPER 65

Query: 69 RLDYD 73
          R +YD
Sbjct: 66 RAEYD 70

Length = 237

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 68.5 bits (167), Expect = 8e-15
 Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +++DYY++L VD +A+ ++++  YRKLA K+HPD +    A   KF+E+ EAY  LSDP 
Sbjct: 2  SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDA-EDKFKEVKEAYDTLSDPQ 60

Query: 68 KRLDYDFTG 76
          K+  YD  G
Sbjct: 61 KKAHYDQFG 69

Length = 371

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY++L +D DA +++I+  +RKLA K+HPD++    A +  F EINEA  VLS+P K
Sbjct: 1  KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASI-FAEINEANDVLSNPKK 59

Query: 69 RLDYDFTGIYEIDK 82
          R +YD  G   +D+
Sbjct: 60 RANYDKYGHDGVDR 73

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 66.1 bits (161), Expect = 6e-14
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          +KDYY++L V   A++++IR  YRKLA ++HPD  N       K  EINEA  VL D DK
Sbjct: 3  KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDL-NKSPDAHDKMVEINEAADVLLDKDK 61

Query: 69 RLDYDFTG 76
          R  YD  G
Sbjct: 62 RKQYDQFG 69

Length = 372

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 65.8 bits (160), Expect = 9e-14
 Identities = 30/68 (44%), Positives = 46/68 (67%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY+IL +   A+ ++I+  YRK+A+K+HPDK+ G+    + F+E  EAY VL D +K
Sbjct: 2  KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNK 61

Query: 69 RLDYDFTG 76
          R  YD  G
Sbjct: 62 RAQYDRFG 69

Length = 365

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 63.3 bits (154), Expect = 6e-13
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY I+ V      + I+  YR+LA K+HPD      A  A+F+E+ EA+ VLSD  +R
Sbjct: 4  KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDA-EARFKEVAEAWEVLSDEQRR 62

Query: 70 LDYD 73
           +YD
Sbjct: 63 AEYD 66

Length = 306

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +DYY+IL V   A+   ++  Y KLA ++HPD  +   A   KF+EIN AY VL D  KR
Sbjct: 3  QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDA-EKKFKEINAAYDVLKDEQKR 61

Query: 70 LDYDFTG 76
            YD  G
Sbjct: 62 AAYDRFG 68

Length = 372

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 48.4 bits (115), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)

Query: 11  DYYKILEVDYDATDEKIRLNYRKLALKWHPDK-----HNGDSAVTAKFQEINEAYAVLSD 65
           D Y+IL +D D ++  I+  YR L++K+HPDK     +   S    K++ I +AY +L+D
Sbjct: 99  DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTD 158

Query: 66  PDKRLDYDFTGIYEIDKYT 84
             +R +Y   G  +  ++T
Sbjct: 159 KKRRENYLNYGTPDSPQHT 177

Length = 610

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 43.2 bits (101), Expect = 7e-06
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 12  YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 71
           +Y IL V  +A  ++I   Y KLA  ++P K +G +    KF++INEAY +L D DK+  
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSG-NEGFHKFKKINEAYQILGDIDKKKM 633

Query: 72  YDFTG 76
           Y+  G
Sbjct: 634 YNKFG 638

Length = 1136

>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional

 Score = 41.8 bits (98), Expect = 7e-06
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)

Query: 1   MEGNDNN-TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEA 59
           ++G +N  ++ + YKIL +   A+ E+IR  +++L L+ HPD  NG S   A   ++NEA
Sbjct: 55  LKGFENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPD--NGGSTYIA--SKVNEA 110

Query: 60  YAVL 63
             +L
Sbjct: 111 KDLL 114

Length = 116

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 9   QKDYYKILEVD---YDATDEKIRLNYRKLALKWHPDKHNGDSAVTAK--FQEINEAYAVL 63
           + D Y +L +      A   +I   ++K   K+HPDK            F+ I +A  VL
Sbjct: 42  KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVL 101

Query: 64  SDPDKRLDYD 73
            D   RL YD
Sbjct: 102 GDRKLRLQYD 111

Length = 379

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 7   NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDK 42
            T +D YK+L V     D++I+  YRKL  + HPDK
Sbjct: 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232

Length = 267

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 6/70 (8%)

Query: 16 LEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVL--SDPDKRLDYD 73
          L +        +R  Y +   ++HPDK  GD     K + +N  Y  L       R  + 
Sbjct: 19 LPMAAWGNLPLMRKAYLRKCKEYHPDK-GGDE---EKMKRLNSLYKKLQEGVKSARQSFG 74

Query: 74 FTGIYEIDKY 83
               EI  Y
Sbjct: 75 TQDSSEIPTY 84

Length = 647

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.96
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.94
PRK14288	369	chaperone protein DnaJ; Provisional	99.9
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.89
PRK14296	372	chaperone protein DnaJ; Provisional	99.89
PRK14286	372	chaperone protein DnaJ; Provisional	99.88
PRK14279	392	chaperone protein DnaJ; Provisional	99.88
PRK14287	371	chaperone protein DnaJ; Provisional	99.87
PRK14282	369	chaperone protein DnaJ; Provisional	99.87
PRK14285	365	chaperone protein DnaJ; Provisional	99.87
PRK14294	366	chaperone protein DnaJ; Provisional	99.87
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.87
PRK14297	380	chaperone protein DnaJ; Provisional	99.86
PRK14301	373	chaperone protein DnaJ; Provisional	99.86
PRK14277	386	chaperone protein DnaJ; Provisional	99.86
PRK14283	378	chaperone protein DnaJ; Provisional	99.86
PRK14276	380	chaperone protein DnaJ; Provisional	99.86
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.86
PRK14295	389	chaperone protein DnaJ; Provisional	99.86
PRK14284	391	chaperone protein DnaJ; Provisional	99.85
PRK14281	397	chaperone protein DnaJ; Provisional	99.85
PRK10767	371	chaperone protein DnaJ; Provisional	99.85
PRK14298	377	chaperone protein DnaJ; Provisional	99.85
PRK14299	291	chaperone protein DnaJ; Provisional	99.85
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.85
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.85
PRK14291	382	chaperone protein DnaJ; Provisional	99.85
PRK14280	376	chaperone protein DnaJ; Provisional	99.85
PRK14278	378	chaperone protein DnaJ; Provisional	99.85
PRK14290	365	chaperone protein DnaJ; Provisional	99.84
PRK14289	386	chaperone protein DnaJ; Provisional	99.83
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.83
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.82
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.82
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.82
PRK14292	371	chaperone protein DnaJ; Provisional	99.82
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.82
PRK14300	372	chaperone protein DnaJ; Provisional	99.82
PRK14293	374	chaperone protein DnaJ; Provisional	99.81
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.8
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.8
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.79
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.79
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.78
PHA03102	153	Small T antigen; Reviewed	99.75
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.74
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.73
PRK05014	171	hscB co-chaperone HscB; Provisional	99.68
PRK00294	173	hscB co-chaperone HscB; Provisional	99.66
PRK01356	166	hscB co-chaperone HscB; Provisional	99.65
PRK03578	176	hscB co-chaperone HscB; Provisional	99.65
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.64
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.6
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.56
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.52
PTZ00100	116	DnaJ chaperone protein; Provisional	99.51
PHA02624	647	large T antigen; Provisional	99.51
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.48
PRK01773	173	hscB co-chaperone HscB; Provisional	99.44
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.31
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	99.29
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	99.29
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.26
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	99.11
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.59
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.56
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.9
KOG0431	453	consensus Auxilin-like protein and related protein	97.69
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.31
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.15
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	96.36
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	92.54
KOG0724	335	consensus Zuotin and related molecular chaperones	92.26
PF13446	62	RPT: A repeated domain in UCH-protein	90.53
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	88.74
COG5552	88	Uncharacterized conserved protein [Function unknow	80.02

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=3.8e-29  Score=194.92  Aligned_cols=74  Identities=53%  Similarity=0.874  Sum_probs=70.3

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      ..+|||+||||+++||.+|||+|||+||++||||+++++++|+++|+.|++||+|||||++|+.||++|..++.
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~   75 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK   75 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence            56899999999999999999999999999999999998899999999999999999999999999999877654

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=3.2e-27  Score=180.86  Aligned_cols=77  Identities=47%  Similarity=0.768  Sum_probs=73.0

Q ss_pred             CCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccccc
Q 033253            7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKY   83 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   83 (123)
                      -..+|||+||||+++|+..|||+|||+||+++|||+|+++|.|.+.|+.|+.||+|||||++|+.||.+|++++...
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~   89 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDE   89 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccc
Confidence            34699999999999999999999999999999999999999999999999999999999999999999998887743

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.90  E-value=3.5e-24  Score=168.51  Aligned_cols=72  Identities=50%  Similarity=0.792  Sum_probs=67.6

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++||.+|||+|||+||+++|||+++.+++++++|+.|++||+||+||.+|..||++|..++
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~   73 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL   73 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccccc
Confidence            379999999999999999999999999999999988777899999999999999999999999999887654

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=2.5e-23  Score=160.57  Aligned_cols=71  Identities=49%  Similarity=0.763  Sum_probs=65.8

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      .+..+|+||||+++|+.+|||+|||+||+++||||++.   +.++|+.|..||+|||||++|..||++|..++.
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~   72 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQ   72 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhc
Confidence            35689999999999999999999999999999999876   679999999999999999999999999977654

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.89  E-value=2.6e-23  Score=163.67  Aligned_cols=71  Identities=45%  Similarity=0.678  Sum_probs=66.1

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++. +.|+++|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~   73 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF   73 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhh
Confidence            4799999999999999999999999999999999874 6789999999999999999999999999887554

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.88  E-value=3.3e-23  Score=163.09  Aligned_cols=72  Identities=47%  Similarity=0.822  Sum_probs=67.5

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++.+++++++|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~   74 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV   74 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhh
Confidence            479999999999999999999999999999999988778899999999999999999999999999886543

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.88  E-value=4.2e-23  Score=163.48  Aligned_cols=69  Identities=49%  Similarity=0.748  Sum_probs=65.8

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      .+|||+||||+++|+.++||+|||+||+++|||++++++++++.|+.|++||+||+||.+|..||++|.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            489999999999999999999999999999999998777899999999999999999999999999864

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=2.4e-22  Score=158.22  Aligned_cols=71  Identities=42%  Similarity=0.762  Sum_probs=65.8

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++. ++++++|+.|++||++|+||.+|..||++|..++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~   73 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDP   73 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccc
Confidence            4699999999999999999999999999999999864 6788999999999999999999999999886543

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=2.8e-22  Score=157.72  Aligned_cols=72  Identities=49%  Similarity=0.829  Sum_probs=66.3

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++.. .+++++|+.|++||+||+||.+|..||.+|..+.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~   75 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE   75 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence            47999999999999999999999999999999998754 5688999999999999999999999999886543

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=2.5e-22  Score=157.77  Aligned_cols=71  Identities=42%  Similarity=0.762  Sum_probs=66.9

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++.++++.++|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~   73 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF   73 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchh
Confidence            69999999999999999999999999999999988778899999999999999999999999999886543

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=2.7e-22  Score=157.68  Aligned_cols=72  Identities=50%  Similarity=0.822  Sum_probs=67.7

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .+|||+||||+++|+.++||+|||+||+++|||+++.++++++.|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~   74 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL   74 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccc
Confidence            479999999999999999999999999999999998777899999999999999999999999999887654

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.87  E-value=3.2e-22  Score=159.62  Aligned_cols=69  Identities=45%  Similarity=0.717  Sum_probs=63.3

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ...|||+||||+++||.++||+|||+||+++|||+++.    .++|+.|++||+||+||.+|..||.+|..++
T Consensus        26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~   94 (421)
T PTZ00037         26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGL   94 (421)
T ss_pred             cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhc
Confidence            36799999999999999999999999999999999753    4899999999999999999999999887654

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=4.1e-22  Score=157.31  Aligned_cols=72  Identities=49%  Similarity=0.892  Sum_probs=67.5

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++.+++++++|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~   74 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF   74 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccc
Confidence            369999999999999999999999999999999998777899999999999999999999999999886654

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=4.1e-22  Score=156.96  Aligned_cols=72  Identities=44%  Similarity=0.792  Sum_probs=67.5

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++++++++++|+.|++||+||+||.+|..||.+|..++
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~   74 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV   74 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccccc
Confidence            479999999999999999999999999999999998778899999999999999999999999999886654

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=4.3e-22  Score=157.44  Aligned_cols=72  Identities=54%  Similarity=0.884  Sum_probs=67.2

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++++++++++|+.|++||+||+||.+|..||.+|..++
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~   75 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAF   75 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccc
Confidence            379999999999999999999999999999999998777899999999999999999999999999876544

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=6.1e-22  Score=156.23  Aligned_cols=72  Identities=49%  Similarity=0.785  Sum_probs=66.9

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      ..|||+||||+++|+.+|||+|||+||+++|||++++ +.++++|+.|++||+||+||.+|..||++|..++.
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~   75 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMD   75 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccc
Confidence            5799999999999999999999999999999999875 77899999999999999999999999998876553

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=5.8e-22  Score=156.44  Aligned_cols=71  Identities=41%  Similarity=0.709  Sum_probs=65.9

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .+|||+||||+++|+.++||+|||+||+++|||+++. +.++++|+.|++||+||+||.+|..||++|..++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~   73 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGA   73 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccc
Confidence            4799999999999999999999999999999999874 6788999999999999999999999999886654

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=4.1e-22  Score=148.92  Aligned_cols=73  Identities=48%  Similarity=0.749  Sum_probs=68.6

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ...|+|+||||+++++.++|||+||+|++++|||+++.+|++.+.|+.|++||+||+||.+|..||.+|..++
T Consensus        29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l  101 (279)
T KOG0716|consen   29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL  101 (279)
T ss_pred             chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence            3567999999999999999999999999999999999989999999999999999999999999999876654

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=9.9e-22  Score=155.55  Aligned_cols=72  Identities=50%  Similarity=0.799  Sum_probs=67.0

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcc----cCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDF----TGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~----~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++.+++++++|+.|++||+||+||.+|..||+    +|..++
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~   83 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGF   83 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccc
Confidence            479999999999999999999999999999999988777899999999999999999999999998    776554

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.1e-21  Score=155.44  Aligned_cols=71  Identities=49%  Similarity=0.773  Sum_probs=66.6

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+||+++|||++++++.++++|+.|++||+||+||.+|..||++|..++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~   71 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP   71 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence            48999999999999999999999999999999998778899999999999999999999999999886543

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.1e-21  Score=155.68  Aligned_cols=71  Identities=46%  Similarity=0.791  Sum_probs=66.8

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++++..+++.|+.|++||++|+||.+|..||.+|..++
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~   73 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV   73 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence            69999999999999999999999999999999988777889999999999999999999999999886554

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.4e-21  Score=153.85  Aligned_cols=72  Identities=49%  Similarity=0.881  Sum_probs=67.2

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||++++++.++++|+.|++||++|+||.+|..||.++..++
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF   74 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccccc
Confidence            479999999999999999999999999999999988777889999999999999999999999999876544

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.1e-21  Score=154.74  Aligned_cols=71  Identities=52%  Similarity=0.819  Sum_probs=65.7

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+||+++|||+++. +.++++|+.|++||+||+||.+|..||++|..++
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~   74 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGI   74 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccc
Confidence            3699999999999999999999999999999999864 6788999999999999999999999999886654

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.4e-21  Score=149.45  Aligned_cols=69  Identities=49%  Similarity=0.789  Sum_probs=64.6

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY   78 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   78 (123)
                      ..|||+||||+++||.++||+|||+||+++|||+++ ++.++++|+.|++||++|+||.+|..||.+|..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~   71 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT   71 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence            479999999999999999999999999999999986 477899999999999999999999999997764

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=1.8e-21  Score=148.58  Aligned_cols=82  Identities=41%  Similarity=0.639  Sum_probs=74.1

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccccCHHHH
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREY   88 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~~~~~   88 (123)
                      ..|||+||||+++++.++|++|||+.++++|||+|+++|+|.+.|..|.+||+||+|+..|.+||..+..+.......+.
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~~d~   83 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGREDQ   83 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhhhhH
Confidence            68999999999999999999999999999999999999999999999999999999999999999988777665533333


Q ss_pred             HH
Q 033253           89 LA   90 (123)
Q Consensus        89 ~~   90 (123)
                      ..
T Consensus        84 ~~   85 (296)
T KOG0691|consen   84 AD   85 (296)
T ss_pred             HH
Confidence            33

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.85  E-value=1.2e-21  Score=118.32  Aligned_cols=63  Identities=49%  Similarity=0.890  Sum_probs=59.7

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHhCCchhhhhhc
Q 033253           11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYD   73 (123)
Q Consensus        11 d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd   73 (123)
                      |||+||||+++++.++||++|+++++.+|||+++... .+.+.|..|++||++|+||.+|..||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987755 68899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.4e-21  Score=154.40  Aligned_cols=71  Identities=52%  Similarity=0.803  Sum_probs=65.6

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      +.|||+||||+++|+.++||+|||+||+++|||+++. +.++++|+.|++||+||+||.+|..||.++..++
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~   72 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF   72 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence            4799999999999999999999999999999999875 6788999999999999999999999999876543

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.5e-21  Score=153.84  Aligned_cols=71  Identities=44%  Similarity=0.722  Sum_probs=65.7

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.++||+|||+|++++|||+++. +.++++|+.|++||+||+||.+|..||.+|..++
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~   73 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGP   73 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhccHhHHHHHHhcCcccc
Confidence            3799999999999999999999999999999999874 6788999999999999999999999999886543

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.8e-21  Score=153.51  Aligned_cols=68  Identities=47%  Similarity=0.724  Sum_probs=64.2

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY   78 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   78 (123)
                      .|||+||||+++|+.++||+|||+||+++|||+++ +++++++|+.|++||+||+||.+|..||.+|..
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~   70 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP   70 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence            69999999999999999999999999999999987 477899999999999999999999999998753

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=4.6e-21  Score=150.65  Aligned_cols=71  Identities=56%  Similarity=0.952  Sum_probs=65.9

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++.+. .++++|+.|++||++|+||.+|..||.+|..++
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~   74 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF   74 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccc
Confidence            69999999999999999999999999999999987654 688999999999999999999999999886544

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=6.4e-21  Score=150.74  Aligned_cols=72  Identities=49%  Similarity=0.804  Sum_probs=67.4

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ..|||+||||+++|+.+|||+|||+||+++|||+++.+++++++|+.|++||++|+||.+|..||.+|..++
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~   75 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV   75 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccccc
Confidence            479999999999999999999999999999999998778899999999999999999999999999876543

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=5e-21  Score=151.49  Aligned_cols=88  Identities=39%  Similarity=0.619  Sum_probs=73.3

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc---
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID---   81 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~---   81 (123)
                      ....+.||+||||.++++..+||++||+||+++|||+++.. .++.++|..|+.||+|||||..|.+||.+....+.   
T Consensus         4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~~   83 (508)
T KOG0717|consen    4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGKN   83 (508)
T ss_pred             chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCCC
Confidence            34568899999999999999999999999999999997654 57999999999999999999999999997764333   


Q ss_pred             ---ccCHHHHHHHHh
Q 033253           82 ---KYTLREYLARFK   93 (123)
Q Consensus        82 ---~~~~~~~~~~~~   93 (123)
                         +....+.+..|.
T Consensus        84 s~~~~~~~dlf~ff~   98 (508)
T KOG0717|consen   84 SDTGVQIEDLFQFFT   98 (508)
T ss_pred             CccccchHHHHHHhh
Confidence               234455554443

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.82  E-value=1.2e-20  Score=160.03  Aligned_cols=77  Identities=35%  Similarity=0.497  Sum_probs=70.2

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccccCH
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTL   85 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~~   85 (123)
                      ...+||+||||+++|+..+||+|||+||+++|||+++++ .+.++|+.|.+||+|||||.+|..||.+|..++....+
T Consensus       571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~  647 (1136)
T PTZ00341        571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNF  647 (1136)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCc
Confidence            468999999999999999999999999999999998874 68889999999999999999999999999887765443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.82  E-value=1.3e-20  Score=147.42  Aligned_cols=69  Identities=55%  Similarity=0.894  Sum_probs=64.1

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        11 d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      |||+||||+++|+.++||+|||+||+++|||+++ .+.++++|+.|++||++|+||.+|..||.++..++
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~   69 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF   69 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccc
Confidence            7999999999999999999999999999999987 46688999999999999999999999999876544

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=1.8e-20  Score=143.26  Aligned_cols=71  Identities=45%  Similarity=0.788  Sum_probs=65.9

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      ...|||+||||+++|+..|||+||++|++++|||.+.. .++.+.|+.|.+||+||+|+++|..||..+..+
T Consensus        41 ~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~  111 (288)
T KOG0715|consen   41 SKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ  111 (288)
T ss_pred             CCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence            34499999999999999999999999999999999876 489999999999999999999999999988664

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=3.3e-20  Score=146.06  Aligned_cols=69  Identities=49%  Similarity=0.825  Sum_probs=64.3

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++ ...++++|+.|++||++|+||.+|..||.+|..+
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~   70 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP   70 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence            58999999999999999999999999999999986 4678899999999999999999999999987653

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=1.3e-20  Score=149.49  Aligned_cols=76  Identities=43%  Similarity=0.676  Sum_probs=69.2

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      ...+.+||.+||||++||.+|||+|||++++.+|||+..++.   .|++.|..|.+||||||||.+|.+||..|..|++
T Consensus         5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            344569999999999999999999999999999999987543   4889999999999999999999999999988887

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1.7e-20  Score=147.73  Aligned_cols=70  Identities=41%  Similarity=0.669  Sum_probs=64.8

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++ ...++++|+.|++||++|+|+.+|..||.+|..++
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~   72 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAF   72 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccc
Confidence            69999999999999999999999999999999976 36688899999999999999999999999876543

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=4.7e-20  Score=145.32  Aligned_cols=70  Identities=44%  Similarity=0.775  Sum_probs=64.9

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++. +.++++|+.|++||+||+||.+|..||.+|..++
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~   72 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGV   72 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHHHHHHHhchHHHHHHhhcccccc
Confidence            699999999999999999999999999999999764 6688999999999999999999999999886543

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.80  E-value=8.2e-20  Score=140.61  Aligned_cols=66  Identities=41%  Similarity=0.674  Sum_probs=62.3

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      .|||+||||++.++.++||+|||+||+++|||+++. +.++++|+.|++||++|+||.+|..||..+
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g   69 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQLW   69 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Confidence            699999999999999999999999999999999764 678999999999999999999999999865

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=1.3e-19  Score=133.21  Aligned_cols=72  Identities=49%  Similarity=0.786  Sum_probs=64.9

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHN--GDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~--~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      ...|+|+||||.++|+..+|++||++|++++|||+++  ...++.+.|++|+.||+||+|.++|..||..|...
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id   85 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID   85 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence            3469999999999999999999999999999999985  23468899999999999999999999999988543

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.79  E-value=2.4e-19  Score=106.75  Aligned_cols=58  Identities=59%  Similarity=0.956  Sum_probs=54.1

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHHHHHHHhCCch
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG-DSAVTAKFQEINEAYAVLSDPD   67 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~-~~~~~~~f~~i~~Ay~~L~d~~   67 (123)
                      +|||+||||+++++.++||++|+++++.+|||++++ .+.+.+.|..|++||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence            489999999999999999999999999999999875 4678899999999999999985

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.79  E-value=2.1e-19  Score=149.62  Aligned_cols=71  Identities=45%  Similarity=0.791  Sum_probs=66.1

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      .|||+||||+++|+.++||+|||+|++++|||+++. +.+.++|+.|++||++|+||.+|..||.++..+..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            699999999999999999999999999999999776 67888999999999999999999999998876654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.78  E-value=7.9e-19  Score=102.68  Aligned_cols=55  Identities=64%  Similarity=0.979  Sum_probs=51.6

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCC
Q 033253           11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD   65 (123)
Q Consensus        11 d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d   65 (123)
                      |||+||||++.++.++||++|+++++++|||++++...+.+.|..|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999999987656788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PHA03102 Small T antigen; Reviewed

Probab=99.75  E-value=2.4e-18  Score=120.48  Aligned_cols=69  Identities=23%  Similarity=0.292  Sum_probs=62.0

Q ss_pred             cCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccc
Q 033253           10 KDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK   82 (123)
Q Consensus        10 ~d~Y~vLgv~~~a--~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (123)
                      ..+|+||||+++|  |.++||+|||++++++|||++++    ++.|+.|++||++|+|+.+|..||..|......
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~   75 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSE   75 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCccccc
Confidence            4689999999999  99999999999999999999643    379999999999999999999999988665443

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=4.8e-18  Score=123.72  Aligned_cols=73  Identities=32%  Similarity=0.558  Sum_probs=66.7

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY   78 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   78 (123)
                      ....-|+|+||||+++++.+|||+|||+|++++||||++..++.++.|..|.+||+.|+|+..|..|..+|..
T Consensus        95 ~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P  167 (230)
T KOG0721|consen   95 ERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP  167 (230)
T ss_pred             HhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence            3456799999999999999999999999999999999887677788899999999999999999999988754

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.74  E-value=5.6e-18  Score=131.54  Aligned_cols=68  Identities=46%  Similarity=0.788  Sum_probs=63.2

Q ss_pred             CCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~---~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ++.+|||+||||.++|+..||.+|||++|.+||||...+.++   |+..|.-|..|-+||+||++|..+|.
T Consensus       391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn  461 (504)
T KOG0624|consen  391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN  461 (504)
T ss_pred             hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC
Confidence            468999999999999999999999999999999999876543   88899999999999999999999993

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=8.1e-18  Score=120.74  Aligned_cols=68  Identities=53%  Similarity=0.884  Sum_probs=64.2

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA-VTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~-~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      ...+||+||||+++++..+|+++||++++++|||+++..+. +.+.|+.|++||++|+|+..|..||..
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            45789999999999999999999999999999999988775 999999999999999999999999974

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.68  E-value=8.4e-17  Score=114.84  Aligned_cols=66  Identities=27%  Similarity=0.520  Sum_probs=58.4

Q ss_pred             cCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253           10 KDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus        10 ~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      .|||+||||++.  ++..+|+++||++++++|||+..+.+.     +.+.+..|++||++|+||.+|..|+..
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~   73 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS   73 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence            489999999995  788999999999999999999765432     566889999999999999999999864

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.66  E-value=2.4e-16  Score=112.60  Aligned_cols=69  Identities=22%  Similarity=0.403  Sum_probs=61.1

Q ss_pred             CCccCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253            7 NTQKDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      ++..|||++|||++.  .+..+|+++||++++++|||+..+.+.     +.+.+..|++||++|+||.+|..|+..
T Consensus         1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~   76 (173)
T PRK00294          1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLA   76 (173)
T ss_pred             CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence            367899999999996  678999999999999999999866543     556799999999999999999999963

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.65  E-value=2.4e-16  Score=111.98  Aligned_cols=67  Identities=25%  Similarity=0.420  Sum_probs=57.8

Q ss_pred             cCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253           10 KDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus        10 ~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~---~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      .|||+||||++.  ++..+|+++||++++++|||+..+..+   +.+.+..|++||++|+||.+|..|....
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l   73 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL   73 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            589999999996  789999999999999999999765332   3345789999999999999999997644

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.65  E-value=3.6e-16  Score=112.05  Aligned_cols=67  Identities=24%  Similarity=0.404  Sum_probs=58.5

Q ss_pred             CccCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHH-----HHHHHHHHHHHhCCchhhhhhcc
Q 033253            8 TQKDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSAVTA-----KFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~-----~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ...|||+||||++.  ++..+|+++||++++++|||+....+..++     .+..||+||++|+||.+|..|..
T Consensus         4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            34799999999985  689999999999999999999876555443     35899999999999999999985

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.64  E-value=2.3e-16  Score=125.18  Aligned_cols=68  Identities=32%  Similarity=0.510  Sum_probs=64.6

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      +.+|+|.+|||+++++.++|||.||++|..+|||||. .+.|++.|+.|+.||++|+|+.+|..||...
T Consensus       233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~  300 (490)
T KOG0720|consen  233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL  300 (490)
T ss_pred             cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence            3789999999999999999999999999999999988 5899999999999999999999999999754

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.60  E-value=4e-16  Score=116.40  Aligned_cols=67  Identities=31%  Similarity=0.610  Sum_probs=62.2

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      +.+|+|+||||.+.++..+|.+|||+||+++|||++++ +++.+.|+.|..||++|.|.+.|..||-.
T Consensus        31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHH
Confidence            46899999999999999999999999999999999876 56669999999999999999999999953

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.56  E-value=4.5e-15  Score=117.05  Aligned_cols=70  Identities=49%  Similarity=0.850  Sum_probs=65.7

Q ss_pred             CCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            5 DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         5 ~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ..++..|||.||||.+.++..+||+|||++++.+|||++.+. .+++..|+.|.+||.||+||.+|.+||.
T Consensus       368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds  438 (486)
T KOG0550|consen  368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS  438 (486)
T ss_pred             HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence            356778999999999999999999999999999999998877 6799999999999999999999999997

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.52  E-value=1.1e-14  Score=108.81  Aligned_cols=73  Identities=53%  Similarity=0.803  Sum_probs=64.3

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      ..|+|+||+|.+.++..+|++||+++++.+|||+++.. ..++.+|++|.+||++|+|+.+|..||+.+..+..
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~   75 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLK   75 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccc
Confidence            46899999999999999999999999999999997765 24555899999999999999999999999864443

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.51  E-value=2.1e-14  Score=96.25  Aligned_cols=53  Identities=34%  Similarity=0.496  Sum_probs=47.3

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhC
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS   64 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~   64 (123)
                      ...++|+||||+++++.++||++||+|++++|||+.++    .+.|..|++||++|.
T Consensus        63 s~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----~~~~~kIneAyevL~  115 (116)
T PTZ00100         63 SKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----TYIASKVNEAKDLLL  115 (116)
T ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999998432    367889999999985

>PHA02624 large T antigen; Provisional

Probab=99.51  E-value=3.3e-14  Score=117.27  Aligned_cols=82  Identities=20%  Similarity=0.291  Sum_probs=65.2

Q ss_pred             ccCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhh--ccc---CCcccc
Q 033253            9 QKDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDY--DFT---GIYEID   81 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a--~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Y--d~~---~~~~~~   81 (123)
                      ..++|+||||+++|  +..+||+|||++++++|||+.+.    ++.|+.|++||++|+|+.+|..|  |..   +.-...
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v~~~~   85 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYG   85 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhcccccccccCCCCCc
Confidence            56899999999999  99999999999999999999543    47999999999999999999999  432   111223


Q ss_pred             ccCHHHHHHHHhh
Q 033253           82 KYTLREYLARFKG   94 (123)
Q Consensus        82 ~~~~~~~~~~~~~   94 (123)
                      .....+|+..|+.
T Consensus        86 ~~~w~~ww~~f~~   98 (647)
T PHA02624         86 TPEWEQWWEEFNE   98 (647)
T ss_pred             cccHHHHHHHhhh
Confidence            4455556655553

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.48  E-value=5.8e-14  Score=106.47  Aligned_cols=59  Identities=37%  Similarity=0.541  Sum_probs=51.7

Q ss_pred             CCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C----hHHHHHHHHHHHHHHHhCC
Q 033253            7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG---D----SAVTAKFQEINEAYAVLSD   65 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~---~----~~~~~~f~~i~~Ay~~L~d   65 (123)
                      ....++|+||||++++|.++||++||+|++++|||+..+   +    +.+.++|+.|++||++|+.
T Consensus       197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999643   1    2478899999999999974

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=3.3e-13  Score=96.51  Aligned_cols=65  Identities=25%  Similarity=0.391  Sum_probs=57.1

Q ss_pred             cCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253           10 KDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus        10 ~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      .|||++||||+.  .+...++++|+++.+.+|||+....+.     +.+.-..||+||++|+||.+|..|=.
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            589999999985  899999999999999999999876553     34456799999999999999999955

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.31  E-value=1.6e-12  Score=103.68  Aligned_cols=70  Identities=36%  Similarity=0.615  Sum_probs=63.0

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG-----DSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      +.-|+|+|||+..+++..+||++||+|+.++||||.+.     .++.++.++.|++||+.|+|...|..|-.+|.
T Consensus        96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGt  170 (610)
T COG5407          96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGT  170 (610)
T ss_pred             cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCC
Confidence            45699999999999999999999999999999999764     24678899999999999999999999987763

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=5.7e-12  Score=95.17  Aligned_cols=92  Identities=28%  Similarity=0.404  Sum_probs=73.8

Q ss_pred             CCCccCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCc--
Q 033253            6 NNTQKDYYKILEVDY---DATDEKIRLNYRKLALKWHPDKH--NGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY--   78 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~---~a~~~~Ik~ayr~l~~~~hPD~~--~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~--   78 (123)
                      ++++.|+|.+|||+.   .+++.+|.++.++.+.++|||+.  +++....+.|+.|+.||+||+|+.+|..||+....  
T Consensus        39 ~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~ad  118 (379)
T COG5269          39 NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDAD  118 (379)
T ss_pred             hhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccccC
Confidence            456789999999986   68899999999999999999996  33345678999999999999999999999985422  


Q ss_pred             --cccccCHHHHHHHHhhhhh
Q 033253           79 --EIDKYTLREYLARFKGMIL   97 (123)
Q Consensus        79 --~~~~~~~~~~~~~~~~~~~   97 (123)
                        .....++.+|++.|...+-
T Consensus       119 vppp~~~t~~~Ffe~w~pvFe  139 (379)
T COG5269         119 VPPPRIYTPDEFFEVWEPVFE  139 (379)
T ss_pred             CCCccCCCchhHHHHHHHHHH
Confidence              2234577777766655543

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=4.5e-12  Score=91.85  Aligned_cols=65  Identities=31%  Similarity=0.538  Sum_probs=59.9

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYD   73 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd   73 (123)
                      +-|+|+||.|.|..+.++||+.||+|++.+|||+|+.+ +.|...|--|.+||.+|-|+..|..-+
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~  117 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL  117 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            57899999999999999999999999999999999988 668899999999999999998776554

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.26  E-value=1.4e-11  Score=86.94  Aligned_cols=56  Identities=30%  Similarity=0.530  Sum_probs=48.2

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253           21 DATDEKIRLNYRKLALKWHPDKHNGDS-----AVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus        21 ~a~~~~Ik~ayr~l~~~~hPD~~~~~~-----~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      ..+..+|+++||++++++|||+..+.+     .+.+.+..|++||++|+||.+|..|....
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l   62 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSL   62 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            357899999999999999999865433     25678999999999999999999998754

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.11  E-value=9.8e-11  Score=86.91  Aligned_cols=107  Identities=22%  Similarity=0.349  Sum_probs=74.8

Q ss_pred             CCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHH-HhCCchhhhhhcccCCccccccCH
Q 033253            7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYA-VLSDPDKRLDYDFTGIYEIDKYTL   85 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~-~L~d~~~R~~Yd~~~~~~~~~~~~   85 (123)
                      .+-+.+|.||||..+|+..+++.||..|++++|||... ++...++|.+|.+||. ||+....+.  +-..+.+.+.++.
T Consensus        44 e~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs-~~adaa~f~qideafrkvlq~~~~kt--n~~qn~~edee~~  120 (342)
T KOG0568|consen   44 EKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGS-EEADAARFIQIDEAFRKVLQEKFAKT--NARQNIGEDEEDA  120 (342)
T ss_pred             HHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCC-ccccHHHHHHHHHHHHHHHHHHHHHh--hhccccccchhhH
Confidence            34567999999999999999999999999999999854 4566789999999998 776433321  1112223333344


Q ss_pred             HHHH----HHHhhhhhhcccCCCCCCccccccccC
Q 033253           86 REYL----ARFKGMILTCNGLGISHTSMWSQQLTE  116 (123)
Q Consensus        86 ~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~  116 (123)
                      .+|-    .--...++++.|.|+++..++++.+..
T Consensus       121 ~efdik~kapqhrhyls~egig~gtp~qrekhyqq  155 (342)
T KOG0568|consen  121 EEFDIKHKAPQHRHYLSFEGIGFGTPFQREKHYQQ  155 (342)
T ss_pred             HHhhhccCCchhhhhhcccCcccCCchHHHHHHHH
Confidence            4441    111233456689999888888877654

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.59  E-value=1.1e-07  Score=62.54  Aligned_cols=56  Identities=27%  Similarity=0.334  Sum_probs=45.8

Q ss_pred             CCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCc
Q 033253            7 NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP   66 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~   66 (123)
                      +..+.--.||||+++++.+.||+|+|+++...|||+.+++    -.-..|++|+++|...
T Consensus        53 Msr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP----YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   53 MSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP----YLASKINEAKDLLEGT  108 (112)
T ss_pred             cchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH----HHHHHHHHHHHHHhcc
Confidence            3444555699999999999999999999999999997653    3334699999999754

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.56  E-value=9.3e-08  Score=83.23  Aligned_cols=54  Identities=41%  Similarity=0.582  Sum_probs=45.7

Q ss_pred             ccCccccccCCC----CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCC
Q 033253            9 QKDYYKILEVDY----DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD   65 (123)
Q Consensus         9 ~~d~Y~vLgv~~----~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d   65 (123)
                      .-+-|+||.|+-    .-..+.||++|++||.++|||||   |+..+.|..+++|||.|..
T Consensus      1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN---PEGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN---PEGREMFERVNKAYELLSS 1337 (2235)
T ss_pred             hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC---chHHHHHHHHHHHHHHHHH
Confidence            345799999975    33568999999999999999997   4567899999999999983

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.90  E-value=1.4e-05  Score=56.12  Aligned_cols=68  Identities=24%  Similarity=0.499  Sum_probs=54.9

Q ss_pred             CCccCccccccCCC--CCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            7 NTQKDYYKILEVDY--DATDEKIRLNYRKLALKWHPDKHNGD-----SAVTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~--~a~~~~Ik~ayr~l~~~~hPD~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ....+||.++|...  ..++..++.-|.-..+++|||+....     ..+.+....|++||.+|.||.+|..|=.
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil   79 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL   79 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            34678999997654  56777788799999999999984322     2467788999999999999999999954

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=97.69  E-value=4.6e-05  Score=61.96  Aligned_cols=47  Identities=26%  Similarity=0.390  Sum_probs=35.7

Q ss_pred             ccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---H----HHHHHHHHHHHHHH
Q 033253           16 LEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---A----VTAKFQEINEAYAV   62 (123)
Q Consensus        16 Lgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~---~----~~~~f~~i~~Ay~~   62 (123)
                      ++|...++.++||++||+.++.+||||.+..+   +    +++.|-.+++|+..
T Consensus       394 VsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  394 VSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             CchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            34556789999999999999999999987653   1    45556666666654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.31  E-value=7.7e-05  Score=53.29  Aligned_cols=54  Identities=39%  Similarity=0.585  Sum_probs=45.8

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---h----HHHHHHHHHHHHHHHh
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---S----AVTAKFQEINEAYAVL   63 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~---~----~~~~~f~~i~~Ay~~L   63 (123)
                      .+.|.+|++....+..+|+++|+++....|||+....   .    .+.+.+..|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999999999999999999999999974321   2    3677888999999753

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.15  E-value=0.00031  Score=50.18  Aligned_cols=71  Identities=27%  Similarity=0.445  Sum_probs=55.3

Q ss_pred             CccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253           11 DYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus        11 d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      +++..+|+++.  ...+.++..|+.+.+.+|||.....+.     +-+.+..++.||.+|.+|..|..|=.....|..
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g~~   79 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADGLD   79 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccccc
Confidence            45556666664  467889999999999999999766554     335788999999999999999999765554443

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=96.36  E-value=0.0069  Score=41.36  Aligned_cols=51  Identities=22%  Similarity=0.233  Sum_probs=35.6

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCC
Q 033253           11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD   65 (123)
Q Consensus        11 d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d   65 (123)
                      .-..||||++..+.++|.+.|..|....+|++.++    .-.-..|..|.+.|..
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~  109 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQ  109 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999998543    2333467778877753

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=92.54  E-value=0.42  Score=31.86  Aligned_cols=48  Identities=15%  Similarity=0.221  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHHHHHHHhCCch
Q 033253           20 YDATDEKIRLNYRKLALKWHPDKHNGDSA----VTAKFQEINEAYAVLSDPD   67 (123)
Q Consensus        20 ~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~----~~~~f~~i~~Ay~~L~d~~   67 (123)
                      ...+..+++.|-|..-+++|||.....|+    .++.++.++.-.+.|..+.
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~   55 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK   55 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence            35577899999999999999998766654    3556788888778777654

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=92.26  E-value=0.17  Score=39.36  Aligned_cols=55  Identities=35%  Similarity=0.512  Sum_probs=43.6

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253           21 DATDEKIRLNYRKLALKWHPDKHNG----DSAVTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus        21 ~a~~~~Ik~ayr~l~~~~hPD~~~~----~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      .++..+|..+|+..+..+||++...    ....++.++.|.+||.||.+...|...|.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~   61 (335)
T KOG0724|consen    3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW   61 (335)
T ss_pred             cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence            4577889999999999999998641    224567899999999999987666666553

>PF13446 RPT: A repeated domain in UCH-protein

Probab=90.53  E-value=0.66  Score=27.22  Aligned_cols=27  Identities=26%  Similarity=0.412  Sum_probs=24.7

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHH
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLAL   36 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~   36 (123)
                      .+-|++|||++..+...|-.+|+....
T Consensus         5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    5 EEAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999877

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=88.74  E-value=1.1  Score=32.58  Aligned_cols=38  Identities=24%  Similarity=0.312  Sum_probs=29.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhC
Q 033253           19 DYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS   64 (123)
Q Consensus        19 ~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~   64 (123)
                      +++|+.+||.+|+.++..++--|     +   +.-..|..||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd-----~---~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD-----E---KSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC-----H---HHHHHHHHHHHHHH
Confidence            57899999999999999998433     2   45557899997643

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>COG5552 Uncharacterized conserved protein [Function unknown]

Probab=80.02  E-value=8.9  Score=23.87  Aligned_cols=36  Identities=17%  Similarity=0.164  Sum_probs=29.8

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHN   44 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~   44 (123)
                      ++|--+++|+.|-++..||+.|-++.++++.-...+
T Consensus         2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P   37 (88)
T COG5552           2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP   37 (88)
T ss_pred             ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence            566778899999999999999999999988554433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	123
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-14
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		6e-14
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		7e-14
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		2e-13
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-11
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-11
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		6e-11
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		7e-11
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		7e-11
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		3e-10
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		3e-10
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		4e-10
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		1e-09
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-09
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		4e-09
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-08
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		2e-08
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		7e-08
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		8e-08
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		5e-07
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		6e-07
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		3e-06
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		4e-06
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		9e-06
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		9e-06

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY+IL V   A + +IR  Y++LA+K+HPD++ GD    AKF+EI EAY VL+D  
Sbjct: 1  AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 61 KRAAYDQYG 69

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY+IL V   A + +IR  Y++LA+K+HPD++ GD    AKF+EI EAY VL+D  
Sbjct: 1  AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 61 KRAAYDQYG 69

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           ++DYY+IL V   A + +IR  Y++LA+K+HPD++ GD    AKF+EI EAY VL+D  
Sbjct: 1  AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 68 KRLDYDFTG 76
          KR  YD  G
Sbjct: 61 KRAAYDQYG 69

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 4  NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVL 63
            + +  DYY+IL V   A+DE ++  YR+LALK+HPDK++   A  A F+ I  AYAVL
Sbjct: 1  GSSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEA-FKAIGTAYAVL 59
Query: 64 SDPDKRLDYD 73
          S+P+KR  YD
Sbjct: 60 SNPEKRKQYD 69

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY+ L +   A+DE+I+  YR+ AL++HPDK N +     KF+EI EAY VLSDP KR
Sbjct: 3  KDYYQTLGLARGASDEEIKRAYRRQALRYHPDK-NKEPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 70 LDYDFTG 76
            +D  G
Sbjct: 62 EIFDRYG 68

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKH-NGDSAVTAKFQEINEAYAVLSDPDKR 69
          DYY++L+V   A+ E I+  YRKLALKWHPDK+         +F+++ EAY VLSD  KR
Sbjct: 10 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 70 LDYDFTG 76
            YD  G
Sbjct: 70 DIYDRYG 76

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 13 YKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDY 72
          Y +L V   A +++++  YRK ALK+HPDK  GD   T KF+EI+EA+ +L+DP KR  Y
Sbjct: 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIY 67
Query: 73 DFTGI 77
          D  G+
Sbjct: 68 DQYGL 72

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 13 YKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDY 72
          Y +L +D +AT + I+ +YRKLALK+HPDK+  +     KF+EIN A+A+L+D  KR  Y
Sbjct: 20 YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIY 79
Query: 73 DFTG 76
          D  G
Sbjct: 80 DKYG 83

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTA--KFQEINEAYAVLSDPDK 68
          +YY++L V   A+ E I+  YRKLAL+WHPDK N D+   A  KF+ ++EAY VLSD  K
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDK-NPDNKEEAEKKFKLVSEAYEVLSDSKK 68
Query: 69 RLDYDFTGI 77
          R  YD  G 
Sbjct: 69 RSLYDRAGC 77

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 12 YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 71
          YY IL V   A++ +I+  + KLA+K+HPDK N      AKF+EI EAY  LSD ++R +
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDK-NKSPDAEAKFREIAEAYETLSDANRRKE 67
Query: 72 YDFTG 76
          YD  G
Sbjct: 68 YDTLG 72

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 12 YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 71
          YY +L V  +AT E+++  YRKLALK+HPDK+  +     KF++I++AY VLSD  KR  
Sbjct: 8  YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEG---EKFKQISQAYEVLSDAKKREL 64
Query: 72 YDFTG 76
          YD  G
Sbjct: 65 YDKGG 69

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 12 YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 71
          YY +L V  DA+D +++  YRK+ALK+HPDK N D A   +F++I++AY VLSD  KR  
Sbjct: 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDK-NPDGA--EQFKQISQAYEVLSDEKKRQI 66
Query: 72 YDFTG 76
          YD  G
Sbjct: 67 YDQGG 71

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 4  NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVL 63
            + +  DYY+IL V  +A+ ++I+  Y +LA K+HPD +  D     KF ++ EAY VL
Sbjct: 1  GSSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVL 60
Query: 64 SDPDKRLDYDFTG 76
          SD  KR  YD  G
Sbjct: 61 SDEVKRKQYDAYG 73

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 12 YYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTA--KFQEINEAYAVLSDPDKR 69
          YY+IL+V   A+ + I+  YR+ AL+WHPDK N D+   A  KF+E+ EAY VLSD  KR
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDK-NPDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 70 LDYDFTG 76
            YD  G
Sbjct: 63 EIYDRYG 69

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 11 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRL 70
          D Y++L V   A+   I+  Y+KLA +WHPDK N D     +F +I++AY +LS+ +KR 
Sbjct: 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDK-NKDPGAEDRFIQISKAYEILSNEEKRT 76
Query: 71 DYDFTG 76
          +YD  G
Sbjct: 77 NYDHYG 82

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +++Y +L V   A+  +IR  ++KLALK HPDK+  +      F +IN AY VL D D R
Sbjct: 21 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 80
Query: 70 LDYDFTG 76
            YD  G
Sbjct: 81 KKYDKYG 87

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +++Y +L V   A+  +IR  ++KLALK HPDK+  +      F +IN AY VL D D R
Sbjct: 2  QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61
Query: 70 LDYDFTG 76
            YD  G
Sbjct: 62 KKYDKYG 68

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6   NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG---DSAVTAKFQEINEAYAV 62
            + ++DYYKIL V  +A  ++I   YRKLAL+WHPD             KF +I  A  V
Sbjct: 378 QSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEV 437
Query: 63  LSDPDKRLDYD 73
           LSDP+ R  +D
Sbjct: 438 LSDPEXRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6   NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG---DSAVTAKFQEINEAYAV 62
            + ++DYYKIL V  +A  ++I   YRKLAL+WHPD             KF +I  A  V
Sbjct: 378 QSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEV 437
Query: 63  LSDPDKRLDYD 73
           LSDP+ R  +D
Sbjct: 438 LSDPEMRKKFD 448

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY I+ V      + I+  YR+LA K+HPD      A  A+F+E+ EA+ VLSD  +R
Sbjct: 5  KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDA-EARFKEVAEAWEVLSDEQRR 63
Query: 70 LDYD 73
           +YD
Sbjct: 64 AEYD 67

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY IL V      + I+  YR+LA K+HPD    + A  AKF+++ EA+ VL D  +R
Sbjct: 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDA-EAKFKDLAEAWEVLKDEQRR 86
Query: 70 LDYD 73
           +YD
Sbjct: 87 AEYD 90

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 2  EGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYA 61
          +G+ + ++   Y +L V   AT  +I+  Y +    +HPD+++G +    +F  I++AY 
Sbjct: 9  QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYV 68
Query: 62 VLSDPDKRLDYD 73
          VL     R  YD
Sbjct: 69 VLGSATLRRKYD 80

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 1  MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA------VTAKFQ 54
          M   +   +KD+Y IL  D  A    ++  Y+KL L +HPDK + D           KF 
Sbjct: 1  MMAVEQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFI 60
Query: 55 EINEAYAVLSDPDKRLDYDF 74
          EI++A+ +L + + + +YD 
Sbjct: 61 EIDQAWKILGNEETKREYDL 80

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 5  DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTA------KFQEINE 58
          +   +KD+Y IL  D  A    ++  Y+KL L +HPDK + D           KF EI++
Sbjct: 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQ 70
Query: 59 AYAVLSDPDKRLDYDF 74
          A+ +L + + +  YD 
Sbjct: 71 AWKILGNEETKKKYDL 86

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +DYY +L  D  ++ E+I   ++  AL+ HPDKH  +      FQ++ +A  +L++ + R
Sbjct: 20 EDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESR 79
Query: 70 LDYD 73
            YD
Sbjct: 80 ARYD 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	123
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	6e-28
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	1e-27
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	3e-27
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	8e-27
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	8e-27
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-26
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	2e-26
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-26
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	3e-26
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	5e-26
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	9e-26
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-25
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	2e-25
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	2e-25
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	7e-25
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-24
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-24
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	5e-24
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	6e-24
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	6e-24
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	4e-22
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	1e-21
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	3e-21
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	7e-21
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	5e-19
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-16
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-14
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-14
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	3e-14
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	3e-14
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	4e-13
2guz_A	71	Mitochondrial import inner membrane translocase su	3e-12
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	8e-09
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	1e-08

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  103 bits (259), Expect = 6e-28
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY IL V      + I+  YR+LA K+HPD    + A  AKF+++ EA+ VL D  +R
Sbjct: 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAE-AKFKDLAEAWEVLKDEQRR 86

Query: 70 LDYD 73
           +YD
Sbjct: 87 AEYD 90

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 97.1 bits (242), Expect = 1e-27
 Identities = 30/66 (45%), Positives = 45/66 (68%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          + +  Y +L +D +AT + I+ +YRKLALK+HPDK+  +     KF+EIN A+A+L+D  
Sbjct: 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT 74

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 75 KRNIYD 80

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 96.0 bits (239), Expect = 3e-27
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 7  NTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
             +DYY +L  D  ++ E+I   ++  AL+ HPDKH  +      FQ++ +A  +L++ 
Sbjct: 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNE 76

Query: 67 DKRLDYD 73
          + R  YD
Sbjct: 77 ESRARYD 83

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 93.8 bits (234), Expect = 8e-27
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY+ L +   A+DE+I+  YR+ AL++HPDK N +     KF+EI EAY VLSDP KR
Sbjct: 3  KDYYQTLGLARGASDEEIKRAYRRQALRYHPDK-NKEPGAEEKFKEIAEAYDVLSDPRKR 61

Query: 70 LDYD 73
            +D
Sbjct: 62 EIFD 65

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 94.4 bits (235), Expect = 8e-27
 Identities = 21/72 (29%), Positives = 38/72 (52%)

Query: 2  EGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYA 61
          +G+ + ++   Y +L V   AT  +I+  Y +    +HPD+++G +    +F  I++AY 
Sbjct: 9  QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYV 68

Query: 62 VLSDPDKRLDYD 73
          VL     R  YD
Sbjct: 69 VLGSATLRRKYD 80

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 96.9 bits (241), Expect = 2e-26
 Identities = 27/64 (42%), Positives = 38/64 (59%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +++Y +L V   A+  +IR  ++KLALK HPDK+  +      F +IN AY VL D D R
Sbjct: 2  QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61

Query: 70 LDYD 73
            YD
Sbjct: 62 KKYD 65

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 95.3 bits (237), Expect = 2e-26
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 6/71 (8%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVT------AKFQEINEAYAV 62
          +KD+Y IL  D  A    ++  Y+KL L +HPDK + D           KF EI++A+ +
Sbjct: 9  KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68

Query: 63 LSDPDKRLDYD 73
          L + + + +YD
Sbjct: 69 LGNEETKREYD 79

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 92.7 bits (231), Expect = 2e-26
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDK 68
           DYY++L+V   A+ E I+  YRKLALKWHPDK+  +      +F+++ EAY VLSD  K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68

Query: 69 RLDYD 73
          R  YD
Sbjct: 69 RDIYD 73

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 93.1 bits (232), Expect = 3e-26
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDK 68
           +YY++L V   A+ E I+  YRKLAL+WHPDK+  +      KF+ ++EAY VLSD  K
Sbjct: 9  ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68

Query: 69 RLDYDFTG 76
          R  YD  G
Sbjct: 69 RSLYDRAG 76

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 92.4 bits (230), Expect = 5e-26
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAV-TAKFQEINEAYAVLSDPDK 68
            YY+IL+V   A+ + I+  YR+ AL+WHPDK+  +      KF+E+ EAY VLSD  K
Sbjct: 2  ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 69 RLDYD 73
          R  YD
Sbjct: 62 REIYD 66

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 91.2 bits (227), Expect = 9e-26
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +  DYY+IL V  +A+ ++I+  Y +LA K+HPD +  D     KF ++ EAY VLSD  
Sbjct: 5  SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV 64

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 65 KRKQYD 70

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 91.7 bits (228), Expect = 1e-25
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVT------AKFQEINEAYAVL 63
          KD+Y IL  D  A    ++  Y+KL L +HPDK + D           KF EI++A+ +L
Sbjct: 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75

Query: 64 SDPDKRLDYD 73
           + + +  YD
Sbjct: 76 GNEETKKKYD 85

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 90.5 bits (225), Expect = 2e-25
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
             D Y++L V   A+   I+  Y+KLA +WHPDK N D     +F +I++AY +LS+ +
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK-NKDPGAEDRFIQISKAYEILSNEE 73

Query: 68 KRLDYD 73
          KR +YD
Sbjct: 74 KRTNYD 79

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 91.1 bits (227), Expect = 2e-25
 Identities = 33/65 (50%), Positives = 46/65 (70%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
          ++DYY+IL V   A + +IR  Y++LA+K+HPD++ GD    AKF+EI EAY VL+D  K
Sbjct: 2  KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 69 RLDYD 73
          R  YD
Sbjct: 62 RAAYD 66

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 88.9 bits (221), Expect = 7e-25
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +  DYY+IL V   A+DE ++  YR+LALK+HPDK N     T  F+ I  AYAVLS+P+
Sbjct: 5  SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDK-NHAPGATEAFKAIGTAYAVLSNPE 63

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 64 KRKQYD 69

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 88.6 bits (220), Expect = 1e-24
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KD + +L V   A+ +++   YRKLA+  HPDK          F+ +  A   L    K 
Sbjct: 27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDK-CVAPGSEDAFKAVVNARTALLKNIKS 85

Query: 70 LDYD 73
              
Sbjct: 86 GPSS 89

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 88.2 bits (219), Expect = 2e-24
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           +   Y +L V   A +++++  YRK ALK+HPDK  GD   T KF+EI+EA+ +L+DP 
Sbjct: 6  KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQ 62

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 63 KREIYD 68

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 86.5 bits (215), Expect = 5e-24
 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
           +  YY +L V  DA+D +++  YRK+ALK+HPDK N D A   +F++I++AY VLSD  
Sbjct: 6  KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDK-NPDGA--EQFKQISQAYEVLSDEK 62

Query: 68 KRLDYD 73
          KR  YD
Sbjct: 63 KRQIYD 68

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 87.0 bits (216), Expect = 6e-24
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 8  TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +   YY IL V   A++ +I+  + KLA+K+HPDK N      AKF+EI EAY  LSD +
Sbjct: 5  SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDK-NKSPDAEAKFREIAEAYETLSDAN 63

Query: 68 KRLDYD 73
          +R +YD
Sbjct: 64 RRKEYD 69

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 87.5 bits (217), Expect = 6e-24
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 10 KDYYKILEVDYDATDEK-IRLNYRKLALKWHPDKHNGDSAVTA---KFQEINEAYAVLSD 65
          ++ Y +LEV+ +  D++ +   YR LA K HPD+            +F+ I  AY  L D
Sbjct: 15 ENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKD 74

Query: 66 PDKRLDYD 73
           + + +YD
Sbjct: 75 DEAKTNYD 82

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 85.0 bits (210), Expect = 4e-22
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 9  QKDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
                +L ++  A      +R  Y K   ++HPDK  GD     K +++N  Y  + D 
Sbjct: 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDK-GGDEE---KMKKMNTLYKKMEDG 65

Query: 67 DKRLDYDFTG 76
           K       G
Sbjct: 66 VKYAHQPDFG 75

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 87.5 bits (216), Expect = 1e-21
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query: 9  QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDK 68
           +++Y +L V   A+  +IR  ++KLALK HPDK+  +      F +IN AY VL D D 
Sbjct: 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 79

Query: 69 RLDYDFTGIYEIDKYTLREY 88
          R  YD  G   ++     +Y
Sbjct: 80 RKKYDKYGEKGLEDNQGGQY 99

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 79.8 bits (197), Expect = 3e-21
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAV-TAKFQEINEAYAVLSDPDK 68
          K+   ++E  +   + + +   R+L LKWHPDK+  +  +    F+ +      L    K
Sbjct: 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---K 72

Query: 69 RLDYD 73
          +   D
Sbjct: 73 QAFLD 77

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 79.9 bits (197), Expect = 7e-21
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 10 KDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
               +L ++  A      +R  Y K   ++HPDK  GD     K +++N  Y  + D  
Sbjct: 8  LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDK-GGDEE---KMKKMNTLYKKMEDGV 63

Query: 68 KRLDYDFTG 76
          K       G
Sbjct: 64 KYAHQPDFG 72

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 80.1 bits (198), Expect = 5e-19
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)

Query: 9   QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTA---KFQEINEAYAVLSD 65
           ++DYYKIL V  +A  ++I   YRKLAL+WHPD    +        KF +I  A  VLSD
Sbjct: 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSD 440

Query: 66  PDKRLDYD 73
           P+ R  +D
Sbjct: 441 PEMRKKFD 448

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 65.4 bits (159), Expect = 1e-14
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 10 KDYYKILEVD-------YDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAV 62
            +Y++           +     ++R  YR+L  + HPD     S    +   +N+AY  
Sbjct: 11 STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSE---QSSTLNQAYHT 67

Query: 63 LSDPDKRLDYDFTGIYEID 81
          L DP +R  Y    +  ID
Sbjct: 68 LKDPLRRSQYMLKLLRNID 86

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 64.6 bits (157), Expect = 2e-14
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 11 DYYKIL--EVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVT-----AKFQEINEAYAVL 63
          DY+ +      Y    + + L ++ L  ++HPDK    S         +   IN+A+  L
Sbjct: 2  DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 64 SDPDKRLDYDF 74
            P  R +Y  
Sbjct: 62 RHPLMRAEYLL 72

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 61.9 bits (150), Expect = 3e-14
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 9  QKDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
          ++   ++L++         +++  Y++ +L  HPDK  G     A  QE+N  +      
Sbjct: 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDK-GGS---HALMQELNSLWGTFKTE 65

Query: 67 DKRLDYDFTG 76
             L  +  G
Sbjct: 66 VYNLRMNLGG 75

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 64.5 bits (156), Expect = 3e-14
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 11  DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPD 67
             +K + +    T E+++  YRK  L  HPDK  G          F E+N+A++   +  
Sbjct: 118 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 177

Query: 68  KRLDY 72
           ++  Y
Sbjct: 178 QKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 62.1 bits (150), Expect = 4e-13
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 7   NTQKDYYKI--LEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEA 59
           +  +DY+ +      +     K++  Y++L    HPD  +  S             +N+A
Sbjct: 40  DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDA 99

Query: 60  YAVLSDPDKRLDYDF 74
           Y  L  P  R  Y  
Sbjct: 100 YKTLLAPLSRGLYLL 114

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 56.6 bits (137), Expect = 3e-12
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 8  TQKDYYKILEVDYDA-TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 66
            K+  +IL +  +  T +K++  +RK+ L  HPDK  G         +INEA   L   
Sbjct: 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDK-GGS---PFLATKINEAKDFLEKR 67

Query: 67 DKR 69
             
Sbjct: 68 GIS 70

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 48.5 bits (115), Expect = 8e-09
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 13 YKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSD 65
          +K + +    T E+++  YRK  L  HP K  G          F E+N+A++   +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 13 YKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVT-------AKFQEINEAY 60
          +K + +        +R +Y++  L  HPDK     A           F+ + EA+
Sbjct: 43 WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAW 97

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	123
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.91
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.91
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.91
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.91
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.9
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.9
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.9
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.9
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.9
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.89
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.89
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.89
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.89
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.88
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.88
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.87
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.87
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.86
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.83
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.82
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.81
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.8
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.8
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.79
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.79
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.79
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.78
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.78
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.75
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.74
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.74
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.74
2guz_A	71	Mitochondrial import inner membrane translocase su	99.73
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.29
2guz_B	65	Mitochondrial import inner membrane translocase su	99.15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	95.02

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=5e-25  Score=137.73  Aligned_cols=75  Identities=40%  Similarity=0.635  Sum_probs=69.1

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .....|||+||||+++++.++||++||++++++|||+++..+.+.+.|+.|++||++|+||.+|..||..+..+.
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   77 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS   77 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence            355789999999999999999999999999999999998778899999999999999999999999999886543

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=1.3e-24  Score=136.71  Aligned_cols=77  Identities=43%  Similarity=0.696  Sum_probs=69.6

Q ss_pred             CCCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            4 NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         4 ~~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ...+...|||+||||+++++.++||+||+++++++|||+++... .+.+.|+.|++||++|+||.+|..||..+..+.
T Consensus         3 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   80 (82)
T 2ej7_A            3 SGSSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS   80 (82)
T ss_dssp             SCCSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred             CCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            44566789999999999999999999999999999999987653 678899999999999999999999999887654

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.91  E-value=1.3e-24  Score=144.39  Aligned_cols=85  Identities=26%  Similarity=0.477  Sum_probs=74.2

Q ss_pred             CCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccccC
Q 033253            5 DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYT   84 (123)
Q Consensus         5 ~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~   84 (123)
                      ......|||+||||+++++.++||+|||+|++++|||++++++.+.+.|+.|++||++|+||.+|..||..+..++. ..
T Consensus        15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~   93 (112)
T 2ctq_A           15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS-MP   93 (112)
T ss_dssp             CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS-SC
T ss_pred             cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC-CC
Confidence            33456899999999999999999999999999999999987788999999999999999999999999998876654 44


Q ss_pred             HHHHHH
Q 033253           85 LREYLA   90 (123)
Q Consensus        85 ~~~~~~   90 (123)
                      ..+|..
T Consensus        94 ~~~w~~   99 (112)
T 2ctq_A           94 FQQWEA   99 (112)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            455543

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.91  E-value=1.9e-24  Score=134.54  Aligned_cols=71  Identities=46%  Similarity=0.747  Sum_probs=66.3

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      .|||+||||+++++.++||+||+++++++|||+++. +.+.+.|+.|++||++|+||.+|..||..+..++.
T Consensus         3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   73 (77)
T 1hdj_A            3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence            689999999999999999999999999999999775 56889999999999999999999999999877655

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=2.5e-24  Score=134.28  Aligned_cols=74  Identities=46%  Similarity=0.761  Sum_probs=67.8

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .+...|||+||||+++++.++||+||+++++++|||+++. +.+.+.|+.|++||++|+||.+|..||..+..+.
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   76 (78)
T 2ctp_A            3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS   76 (78)
T ss_dssp             CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            4567899999999999999999999999999999999765 6788999999999999999999999999886553

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.90  E-value=3.1e-24  Score=138.09  Aligned_cols=76  Identities=32%  Similarity=0.592  Sum_probs=67.6

Q ss_pred             CCCCCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253            2 EGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD------SAVTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus         2 ~~~~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~------~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      ++.......|||+||||+++++.++||+|||+|++++|||+++..      +.+.+.|+.|++||++|+||.+|..||..
T Consensus         8 ~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~   87 (94)
T 1wjz_A            8 MALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ   87 (94)
T ss_dssp             SCCSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred             cccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            344566788999999999999999999999999999999998643      45788999999999999999999999976


Q ss_pred             CC
Q 033253           76 GI   77 (123)
Q Consensus        76 ~~   77 (123)
                      ..
T Consensus        88 l~   89 (94)
T 1wjz_A           88 RS   89 (94)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.90  E-value=4.9e-24  Score=135.92  Aligned_cols=75  Identities=35%  Similarity=0.625  Sum_probs=67.9

Q ss_pred             CCCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253            4 NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus         4 ~~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      .......|||+||||++.++.++||++||++++++|||+++. +.+.+.|+.|++||++|+||.+|..||..+..+
T Consensus        11 ~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           11 SLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             CCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             hhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            344567899999999999999999999999999999999875 678899999999999999999999999987654

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=6e-24  Score=138.29  Aligned_cols=72  Identities=28%  Similarity=0.513  Sum_probs=67.2

Q ss_pred             CCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253            5 DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus         5 ~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      ......|||+||||+++++.++||+|||+|++++|||+++..+.+.+.|+.|++||+||+||.+|..||...
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l   83 (99)
T 2yua_A           12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL   83 (99)
T ss_dssp             CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred             CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence            456678999999999999999999999999999999999877889999999999999999999999999754

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=5.9e-24  Score=135.55  Aligned_cols=73  Identities=41%  Similarity=0.718  Sum_probs=66.7

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      .....|||+||||++.++.++||++||+|++++|||+++ .+.+.+.|+.|++||++|+||.+|..||..+..+
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   75 (88)
T 2ctr_A            3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA   75 (88)
T ss_dssp             SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            345689999999999999999999999999999999987 4778999999999999999999999999877544

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.89  E-value=8e-24  Score=135.85  Aligned_cols=78  Identities=41%  Similarity=0.689  Sum_probs=69.6

Q ss_pred             CCCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253            4 NDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus         4 ~~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      ...+...|||+||||++.++.++||++||+|++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..++.
T Consensus         3 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (92)
T 2dmx_A            3 SGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR   81 (92)
T ss_dssp             CCCCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred             CCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence            3455678999999999999999999999999999999998765 46889999999999999999999999998766543

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.89  E-value=6.9e-24  Score=140.26  Aligned_cols=75  Identities=41%  Similarity=0.679  Sum_probs=69.4

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .....|||+||||++.++.++||+|||+|++++|||+++..+++.+.|+.|++||++|+||.+|..||..+..++
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   87 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL   87 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence            445689999999999999999999999999999999998778899999999999999999999999999886554

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.89  E-value=1.1e-23  Score=129.91  Aligned_cols=67  Identities=45%  Similarity=0.776  Sum_probs=61.7

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      ...|||+||||+++++.++||++|+++++++|||++++.   .+.|+.|++||++|+||.+|..||..|.
T Consensus         6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            468999999999999999999999999999999998754   4789999999999999999999998774

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.89  E-value=3.4e-24  Score=140.32  Aligned_cols=74  Identities=46%  Similarity=0.826  Sum_probs=69.0

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK   82 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (123)
                      ..|||+||||+++++.++||+|||+|++++|||+++..+++.+.|+.|++||++|+||.+|..||..+..++..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   75 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ   75 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence            47899999999999999999999999999999998876788999999999999999999999999998777653

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.88  E-value=1.8e-23  Score=136.18  Aligned_cols=72  Identities=43%  Similarity=0.718  Sum_probs=64.3

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      .|||+||||+++++.++||+|||++++++|||+++.. +.+.+.|+.|++||++|+||.+|..||..+..+..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~   74 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT   74 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence            5899999999999999999999999999999998765 45889999999999999999999999988766654

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.88  E-value=3.6e-23  Score=136.61  Aligned_cols=89  Identities=25%  Similarity=0.393  Sum_probs=72.5

Q ss_pred             CCCCccCccccccCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            5 DNNTQKDYYKILEVDYDA-TDEKIRLNYRKLALKWHPDKHNG---DSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         5 ~~~~~~d~Y~vLgv~~~a-~~~~Ik~ayr~l~~~~hPD~~~~---~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ......|||+||||++++ +.++||+|||++++++|||++++   .+.+.+.|+.|++||++|+||.+|..||..+....
T Consensus        10 ~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~   89 (109)
T 2qsa_A           10 LYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPD   89 (109)
T ss_dssp             STTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTT
T ss_pred             HHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCch
Confidence            445678999999999999 99999999999999999999875   34578999999999999999999999998764332


Q ss_pred             cccCHHHHHHHHhhh
Q 033253           81 DKYTLREYLARFKGM   95 (123)
Q Consensus        81 ~~~~~~~~~~~~~~~   95 (123)
                        ....+++..|...
T Consensus        90 --~~~~~~~~~~~~~  102 (109)
T 2qsa_A           90 --QRFYNYYQYYRLR  102 (109)
T ss_dssp             --CHHHHHHHHHHHC
T ss_pred             --HHHHHHHHHHHHH
Confidence              2234444444433

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.87  E-value=4.7e-23  Score=132.40  Aligned_cols=70  Identities=44%  Similarity=0.766  Sum_probs=63.5

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      ...|||+||||++.++.++||++||+|++++|||+++..   .+.|+.|++||++|+||.+|..||..+..+.
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   75 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA   75 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence            468999999999999999999999999999999998765   3699999999999999999999998775443

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=141.30  Aligned_cols=76  Identities=33%  Similarity=0.615  Sum_probs=69.8

Q ss_pred             CCCCCCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            1 MEGNDNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS------AVTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         1 ~~~~~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~------~~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      |++......+|||+||||+++++.++||+|||+|++++|||+++..+      .+.+.|+.|++||++|+||.+|..||.
T Consensus         1 mm~~~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~   80 (155)
T 2l6l_A            1 MMAVEQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDL   80 (155)
T ss_dssp             CCCCCCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHH
T ss_pred             CCCcccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            78888889999999999999999999999999999999999987653      367899999999999999999999997


Q ss_pred             cC
Q 033253           75 TG   76 (123)
Q Consensus        75 ~~   76 (123)
                      .+
T Consensus        81 ~~   82 (155)
T 2l6l_A           81 QR   82 (155)
T ss_dssp             HH
T ss_pred             Hc
Confidence            44

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.86  E-value=2.4e-22  Score=144.45  Aligned_cols=72  Identities=39%  Similarity=0.661  Sum_probs=67.7

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID   81 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   81 (123)
                      +|||+||||+++++.++||+|||++++++|||++++.+++.+.|+.|++||++|+||.+|..||..|..+..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~   73 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   73 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence            589999999999999999999999999999999987788999999999999999999999999998876654

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=2.1e-21  Score=124.23  Aligned_cols=62  Identities=29%  Similarity=0.387  Sum_probs=57.7

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhh
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD   71 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   71 (123)
                      ..|||+||||+++++.++||+|||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence            5899999999999999999999999999999999875 6688899999999999999998864

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.81  E-value=3.5e-21  Score=128.23  Aligned_cols=65  Identities=23%  Similarity=0.284  Sum_probs=60.0

Q ss_pred             ccCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            9 QKDYYKILEVDYDATD--EKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~--~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      ..++|+||||++.++.  ++||+|||+|++++|||+++.    .++|+.|++||+||+||.+|..||..+.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999999998  999999999999999999775    3799999999999999999999997664

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.80  E-value=2.4e-20  Score=132.04  Aligned_cols=67  Identities=24%  Similarity=0.461  Sum_probs=61.0

Q ss_pred             cCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253           10 KDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus        10 ~d~Y~vLgv~~~a--~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      .|||+||||++.+  +.++||++||++++++|||++++.+.     +.+.|..|++||+||+||.+|..||...
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            3899999999999  99999999999999999999876543     5578999999999999999999999753

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.80  E-value=2.1e-20  Score=117.05  Aligned_cols=61  Identities=20%  Similarity=0.363  Sum_probs=55.9

Q ss_pred             ccCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhc
Q 033253            9 QKDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD   73 (123)
Q Consensus         9 ~~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd   73 (123)
                      ..++|+||||+++  ++.++||+|||+|++++|||+++.    .+.|+.|++||++|+|+.+|..++
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence            3679999999999  999999999999999999999654    479999999999999999999855

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.79  E-value=4.5e-21  Score=147.84  Aligned_cols=70  Identities=39%  Similarity=0.613  Sum_probs=0.0

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      .....|||+||||+++|+.++||+|||+|++++|||+++. +.++++|+.|++||++|+||.+|..||..+
T Consensus        24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~   93 (329)
T 3lz8_A           24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLW   93 (329)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence            3456899999999999999999999999999999999875 578899999999999999999999999873

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.79  E-value=5.5e-21  Score=135.49  Aligned_cols=66  Identities=23%  Similarity=0.274  Sum_probs=58.4

Q ss_pred             CccCccccccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            8 TQKDYYKILEVDYDAT--DEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~--~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      ...|+|+||||+++++  .++||+|||++++++|||++++.    ++|+.|++||++|+||.+|..||..|.
T Consensus         9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E            9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            3478999999999998  69999999999999999997653    789999999999999999999999885

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.79  E-value=3.9e-20  Score=118.00  Aligned_cols=67  Identities=19%  Similarity=0.340  Sum_probs=59.1

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHhCCchhhhhh
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDY   72 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Y   72 (123)
                      .....++|+||||+++++.++||+|||+|++++|||++++. +.+.+.|+.|++||++|+|...|..+
T Consensus        12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~   79 (88)
T 1iur_A           12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN   79 (88)
T ss_dssp             SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred             CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            34557899999999999999999999999999999998876 35889999999999999998777433

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.78  E-value=1.4e-19  Score=131.65  Aligned_cols=67  Identities=24%  Similarity=0.400  Sum_probs=60.3

Q ss_pred             CccCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            8 TQKDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ...|||+||||++.  ++.++||++||+|++++|||++++.+.     +.+.|+.|++||+||+||.+|..||.
T Consensus        41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            46799999999986  799999999999999999999876542     56789999999999999999999985

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.78  E-value=5.8e-20  Score=131.01  Aligned_cols=63  Identities=27%  Similarity=0.430  Sum_probs=59.0

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHhCCchhhhhh
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPDKRLDY   72 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~---~~~~f~~i~~Ay~~L~d~~~R~~Y   72 (123)
                      .|+|+||||++.++.++||+|||++++++|||++++.+.   +.+.|+.|++||++|+|+.+|..|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            699999999999999999999999999999999876543   789999999999999999999887

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.75  E-value=2.4e-19  Score=115.12  Aligned_cols=56  Identities=27%  Similarity=0.403  Sum_probs=51.4

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHhCC
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---AVTAKFQEINEAYAVLSD   65 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~---~~~~~f~~i~~Ay~~L~d   65 (123)
                      .++|++|||++.++.++||+|||++++++|||++++.+   .+++.|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999987654   378899999999999964

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.74  E-value=1.5e-19  Score=150.76  Aligned_cols=77  Identities=36%  Similarity=0.626  Sum_probs=40.8

Q ss_pred             CCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccc
Q 033253            6 NNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK   82 (123)
Q Consensus         6 ~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (123)
                      .....|||+||||+++|+.++||+|||+|++++|||++++.+.+.++|+.|++||++|+||.+|..||..|..+...
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~   93 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED   93 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence            34568999999999999999999999999999999998777888999999999999999999999999999776653

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.74  E-value=5.1e-19  Score=126.24  Aligned_cols=69  Identities=23%  Similarity=0.475  Sum_probs=60.9

Q ss_pred             CCCCccCccccc------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccC
Q 033253            5 DNNTQKDYYKIL------EVDY-DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG   76 (123)
Q Consensus         5 ~~~~~~d~Y~vL------gv~~-~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (123)
                      ......|||+||      |+++ +++.++||++||+|++++|||++++   +.+.|..|++||+||+||.+|..||...
T Consensus         6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            445668999999      4665 8999999999999999999999875   5578999999999999999999999854

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.74  E-value=7.8e-19  Score=115.51  Aligned_cols=59  Identities=19%  Similarity=0.336  Sum_probs=52.0

Q ss_pred             CccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHHHhCCch
Q 033253            8 TQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG---DS----AVTAKFQEINEAYAVLSDPD   67 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~---~~----~~~~~f~~i~~Ay~~L~d~~   67 (123)
                      ...|||+|||++. ++.++||+|||++++++|||+++.   .+    .++++|+.|++||++|+|+.
T Consensus        39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            3479999999996 999999999999999999999763   11    46889999999999999985

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.73  E-value=5.9e-19  Score=108.25  Aligned_cols=59  Identities=29%  Similarity=0.311  Sum_probs=51.8

Q ss_pred             CCccCccccccCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhh
Q 033253            7 NTQKDYYKILEVDY-DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR   69 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~-~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R   69 (123)
                      ....++|+||||++ +++.++||++||+|++++|||+++.    .+.|+.|++||++|+++..|
T Consensus        11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence            34468999999999 7999999999999999999999543    36999999999999987665

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.29  E-value=2e-12  Score=98.62  Aligned_cols=66  Identities=45%  Similarity=0.782  Sum_probs=56.0

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHHHHHHHhCCchhhhhhcc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---SAVTAKFQEINEAYAVLSDPDKRLDYDF   74 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~---~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~   74 (123)
                      ..++|.+||+.+.++.++|+++|+++++++|||+.+..   ..+++.|+.|.+||++|+||.+|..||.
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            45899999999999999999999999999999998754   2478899999999999999999999995

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.15  E-value=2.8e-11  Score=72.71  Aligned_cols=52  Identities=17%  Similarity=0.087  Sum_probs=44.5

Q ss_pred             cCccccccCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCC
Q 033253           10 KDYYKILEVDYD---ATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD   65 (123)
Q Consensus        10 ~d~Y~vLgv~~~---a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d   65 (123)
                      ..-|.||||++.   ++.++|+++||+|+..+|||+.++ +   .....|++|.++|..
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-~---yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-F---YLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-H---HHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-H---HHHHHHHHHHHHHHH
Confidence            456889999999   999999999999999999999544 2   566789999999853

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=95.02  E-value=0.011  Score=48.35  Aligned_cols=48  Identities=15%  Similarity=0.199  Sum_probs=38.3

Q ss_pred             CCccCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHH
Q 033253            7 NTQKDYYKILEVDYDATD--EKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAV   62 (123)
Q Consensus         7 ~~~~d~Y~vLgv~~~a~~--~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~   62 (123)
                      .+.++||.+||++.....  .+|+++||++++..+++        .+++..|..|..|
T Consensus       626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            345669999999777655  78999999999966554        3789999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	123
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-17
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	3e-17
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	2e-15
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-15
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	7e-13
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	9e-13
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	1e-12
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	7e-09

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.9 bits (168), Expect = 3e-17
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 5  DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAK------FQEINE 58
          +   +KD+Y IL  D  A    ++  Y+KL L +HPDK + D            F EI++
Sbjct: 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQ 70

Query: 59 AYAVLSDPDKRLDYDFTG 76
          A+ +L + + +  YD   
Sbjct: 71 AWKILGNEETKKKYDLQR 88

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 68.5 bits (167), Expect = 3e-17
 Identities = 34/67 (50%), Positives = 46/67 (68%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          +DYY+IL V   A + +IR  Y++LA+K+HPD++ GD    AKF+EI EAY VL+D  KR
Sbjct: 3  QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 70 LDYDFTG 76
            YD  G
Sbjct: 63 AAYDQYG 69

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 2e-15
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 69
          KDYY+ L +   A+DE+I+  YR+ AL++HPDK+    A   KF+EI EAY VLSDP KR
Sbjct: 3  KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGA-EEKFKEIAEAYDVLSDPRKR 61

Query: 70 LDYDFTG 76
            +D  G
Sbjct: 62 EIFDRYG 68

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.2 bits (156), Expect = 3e-15
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---SAVTAKFQEINEAYAVLSDP 66
          +  +K + +    T E+++  YRK  L  HPDK  G          F E+N+A++   + 
Sbjct: 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ 92

Query: 67 DKRLDY 72
           ++  Y
Sbjct: 93 GQKPLY 98

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 57.3 bits (138), Expect = 7e-13
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 10 KDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
          +   ++L++         +++  Y++ +L  HPD   G     A  QE+N  +       
Sbjct: 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPD-KGGS---HALMQELNSLWGTFKTEV 66

Query: 68 KRLDYDFTG 76
            L  +  G
Sbjct: 67 YNLRMNLGG 75

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 9e-13
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDK 68
          K+   ++E  +   + + +   R+L LKWHPDK+  +       F+ +      L     
Sbjct: 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAF 75

Query: 69 R 69
           
Sbjct: 76 L 76

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 56.6 bits (136), Expect = 1e-12
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 11 DYYKILEV--DYDATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVL 63
          DY+ +  +   Y    + + L ++ L  ++HPDK    S         +   IN+A+  L
Sbjct: 2  DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 64 SDPDKRLDYD 73
            P  R +Y 
Sbjct: 62 RHPLMRAEYL 71

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 47.9 bits (113), Expect = 7e-09
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 10 KDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 67
               +L ++  A      +R  Y K   ++HPDK   +     K +++N  Y  + D  
Sbjct: 8  LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE----KMKKMNTLYKKMEDGV 63

Query: 68 KRLDYDFTG 76
          K       G
Sbjct: 64 KYAHQPDFG 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	123
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.94
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.9
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.87
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.82
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.81
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.76
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.75

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.2e-27  Score=147.41  Aligned_cols=72  Identities=47%  Similarity=0.829  Sum_probs=68.1

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccc
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI   80 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (123)
                      .+|||+||||+++||.++||+|||++++++|||++++++.+.+.|..|++||+||+||.+|..||.+|..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            579999999999999999999999999999999998878889999999999999999999999999887654

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=138.91  Aligned_cols=72  Identities=46%  Similarity=0.732  Sum_probs=66.9

Q ss_pred             cCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCccccc
Q 033253           10 KDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK   82 (123)
Q Consensus        10 ~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (123)
                      +|||+||||+++++.++|++||+++++++|||++.. +++.+.|..|++||+||+||.+|..||.+|..++..
T Consensus         3 kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccc-hhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            699999999999999999999999999999999765 668889999999999999999999999999887653

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=9.2e-25  Score=139.57  Aligned_cols=73  Identities=33%  Similarity=0.636  Sum_probs=64.8

Q ss_pred             CCCCccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            5 DNNTQKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD------SAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         5 ~~~~~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~------~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      ......|||+||||+++++.++||+||++|++++|||+++..      +.+++.|+.|++||+||+||.+|..||....
T Consensus        11 ~~~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             hhhhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            344568999999999999999999999999999999997654      3477889999999999999999999997654

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.87  E-value=3.7e-24  Score=141.00  Aligned_cols=67  Identities=22%  Similarity=0.294  Sum_probs=60.6

Q ss_pred             ccCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCCcc
Q 033253            9 QKDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE   79 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a--~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (123)
                      ..++|+||||+++|  +.++||+|||+||+++|||++++.    +.|+.|++||+||+||.+|..||..+...
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~----e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT----TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH----HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            56899999999998  788999999999999999998754    68999999999999999999999876443

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.82  E-value=1.5e-21  Score=120.68  Aligned_cols=66  Identities=20%  Similarity=0.361  Sum_probs=59.4

Q ss_pred             CccCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            8 TQKDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         8 ~~~d~Y~vLgv~~~a--~~~~Ik~ayr~l~~~~hPD~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      ...++|+||||++++  +.++||+|||++++++|||+++.    .+.|+.|++||++|+|+.+|..||..+.
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~~~   76 (79)
T d1fafa_           9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLGGT   76 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence            457899999999987  99999999999999999999654    3789999999999999999999997553

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.8e-21  Score=117.18  Aligned_cols=66  Identities=26%  Similarity=0.508  Sum_probs=57.7

Q ss_pred             cCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHHhCCchhhhhhccc
Q 033253           10 KDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDS-----AVTAKFQEINEAYAVLSDPDKRLDYDFT   75 (123)
Q Consensus        10 ~d~Y~vLgv~~~--a~~~~Ik~ayr~l~~~~hPD~~~~~~-----~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~   75 (123)
                      .|||+||||++.  ++.++||++|+++++++|||+..+.+     .+.+.|..|++||+||+||.+|..|+..
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~   73 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS   73 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            489999999985  56999999999999999999976543     2667899999999999999999999853

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=8.3e-20  Score=117.06  Aligned_cols=64  Identities=27%  Similarity=0.418  Sum_probs=58.2

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHhCCchhhhhh
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---AVTAKFQEINEAYAVLSDPDKRLDY   72 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Y   72 (123)
                      ..+.|++|||++.++.++||+|||++++.+|||++++.+   .+.+.|..|++||++|+||.+|..|
T Consensus        32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            357899999999999999999999999999999876553   3788999999999999999999987

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.7e-19  Score=113.52  Aligned_cols=66  Identities=23%  Similarity=0.380  Sum_probs=57.9

Q ss_pred             ccCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHhCCchhhhhhcccCC
Q 033253            9 QKDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYDFTGI   77 (123)
Q Consensus         9 ~~d~Y~vLgv~~~a~~~~Ik~ayr~l~~~~hPD~~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (123)
                      -+++|+||+|+++++.++||+|||+|++++|||+++++. .+.+.|+.|++||++|+   ++..||....
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~   81 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNAD   81 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSS
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccch
Confidence            379999999999999999999999999999999988764 58899999999999996   4666775443